BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007789
(589 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449453958|ref|XP_004144723.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog [Cucumis sativus]
Length = 617
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/622 (80%), Positives = 538/622 (86%), Gaps = 38/622 (6%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKELGNAL+GSPIDTLIRSCLLEERSG AS+NYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHNELGLVFVAVYQRILHLLYVDDLLAM+KQ FSEIYDPKR Y DFDE FRQLR EA
Sbjct: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
EAR ELKK+KQV KP+NN +KQG Q QK GF G N+ DDGD++ +G KLEN
Sbjct: 121 EARTNELKKTKQVGKPLNNARKQG-QDQKTGF--GENKKSNSGLADDGDAERTKGHKLEN 177
Query: 181 GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP 240
G+SN GN + ES++T V NGKENTSSN+GAFDV+KLQKLR+KGGKKTD V +KGS +P
Sbjct: 178 GYSN-GN-HVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKEEP 235
Query: 241 KKKITKKNRVWDDSPPESKLDFTDPAGGNG-SNIEVEAADHGESMMDKEEVFSSDSESEE 299
KKK+TKKNRVWD+ P E+KLDFTDP G NG +NI+V AAD G+SMMDKEEVFSSDSE EE
Sbjct: 236 KKKVTKKNRVWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEEVFSSDSEDEE 295
Query: 300 DEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------- 352
DEE K +KPDAKK GWFSSMFQSI+GKA+LDKADLEPALKALKDRLMTKNVA
Sbjct: 296 DEEGDKGSKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKL 355
Query: 353 -------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 387
AMEEALVRILTPRRSIDILRDVHAAKEQ+KPYVVV
Sbjct: 356 CESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVV 415
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYE
Sbjct: 416 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYE 475
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
KDPA+VAKEAIQEA+RNGSDVVLVDTAGRMQDNEPLMRALSKLI LN+PDLVLFVGEALV
Sbjct: 476 KDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALV 535
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GNDAVDQLSKFNQKLADLS+SP P+LIDGILLTKFDTIDDKVGAALSMVY+SGAPVMFVG
Sbjct: 536 GNDAVDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVG 595
Query: 568 CGQSYTDLKKLNVKSIVKTLLK 589
CGQSYTDLKKLNVKSIVKTL+K
Sbjct: 596 CGQSYTDLKKLNVKSIVKTLIK 617
>gi|224091775|ref|XP_002309350.1| predicted protein [Populus trichocarpa]
gi|222855326|gb|EEE92873.1| predicted protein [Populus trichocarpa]
Length = 624
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/627 (79%), Positives = 538/627 (85%), Gaps = 41/627 (6%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSG AS+NYD+ GA+YTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGTASYNYDAPGASYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHN+LGLVFVAVYQRILHLLYVD+LLAM+K FS+IYDPKR +Y DFDE FRQLRKEA
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDELLAMVKHEFSQIYDPKRVEYFDFDETFRQLRKEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
EARAEEL+K K V K +N+ +K ++KG G N+ AN+ G+ D+ +GRKLEN
Sbjct: 121 EARAEELRKVKPVGKGVNDGRKL--VMKKGSGFGGGNKKNKSEANEGGNGDDGKGRKLEN 178
Query: 181 GHSNVGN---VEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTD--TVVSKG 235
GHSN GN V +E +R G+ANGKEN SSN AFDV+KLQKL++KGGKKT +VVSKG
Sbjct: 179 GHSN-GNHNAVVVEGNRGMGLANGKENASSNNEAFDVTKLQKLKSKGGKKTSDTSVVSKG 237
Query: 236 SNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGS-NIEVEAADHGESMMDKEEVFSSD 294
SN DPKKK+TKKNRVWDDSP ++KLDFTD GNG+ NIEV AAD GESMMDKEE+ SSD
Sbjct: 238 SNVDPKKKVTKKNRVWDDSPKDAKLDFTDHVEGNGNENIEVVAADQGESMMDKEEIVSSD 297
Query: 295 SESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-- 352
SE EEDEEV K +KPDAKK GWFSSMFQSIAGKANL+KADLEPALKALKDRLMTKNVA
Sbjct: 298 SEDEEDEEVSKDSKPDAKKKGWFSSMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEE 357
Query: 353 ------------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRK 382
AMEEALVRILTPRRSIDILRDVHAA EQRK
Sbjct: 358 IAEKLCESVAASLEGKKLSSFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAATEQRK 417
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ+PIF
Sbjct: 418 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIF 477
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
EKGYEKDPA+VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV
Sbjct: 478 EKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 537
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
GEALVGNDAVDQLSKFNQKLADLS+SPNP+LIDGILLTKFDTIDDKVGAALSMVY+SG+P
Sbjct: 538 GEALVGNDAVDQLSKFNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSP 597
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VMFVGCGQSYTDLKKLNVK+IVKTLLK
Sbjct: 598 VMFVGCGQSYTDLKKLNVKAIVKTLLK 624
>gi|255577019|ref|XP_002529394.1| signal recognition particle receptor alpha subunit, putative
[Ricinus communis]
gi|223531142|gb|EEF32990.1| signal recognition particle receptor alpha subunit, putative
[Ricinus communis]
Length = 618
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/624 (80%), Positives = 533/624 (85%), Gaps = 41/624 (6%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSG AS+NYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHNELGLVFVAVYQRILHLLYVD+LLAM+K+ FSEIYD KR +Y+DFDE FRQLRKEA
Sbjct: 61 WTFHNELGLVFVAVYQRILHLLYVDELLAMVKREFSEIYDHKRLEYNDFDETFRQLRKEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
EARAEELKKSKQV KP+N+ KKQG ++KGGF+ G+ + ND GD DN +G KLEN
Sbjct: 121 EARAEELKKSKQVGKPVNDGKKQG-LVRKGGFQGGNKKKI--DGNDGGDDDNGKGYKLEN 177
Query: 181 GHSNVGNVEIEESRVTGVAN--GKENTSSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSN 237
GHSN V+IE SR +GVAN GKEN SSNI AFDV+KLQK R KG KK DTVV SKG N
Sbjct: 178 GHSNGNLVDIEGSR-SGVANANGKENASSNIAAFDVTKLQK-RGKGAKKIDTVVVSKGPN 235
Query: 238 PDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSES 297
DPKKKITKKNRVWDDSP ESKLDFTDP NIEV A DHGESMMDKE++ S
Sbjct: 236 VDPKKKITKKNRVWDDSPSESKLDFTDPVENGNENIEVVATDHGESMMDKEDI-ISSDSE 294
Query: 298 EEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----- 352
EDEEVGK +KP AKK GWFSSMFQSIAGKANL+K+DLEPALKALKDRLMTKNVA
Sbjct: 295 SEDEEVGKESKPGAKKKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAE 354
Query: 353 ---------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYV 385
AMEEALVRILTP+RSIDILRDVHAAKEQ+KPYV
Sbjct: 355 KLCESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPKRSIDILRDVHAAKEQKKPYV 414
Query: 386 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKG 445
VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKG
Sbjct: 415 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKG 474
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
YEKDPAIVAKEAIQEA R GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA
Sbjct: 475 YEKDPAIVAKEAIQEAARYGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 534
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
LVGNDAVDQLSKFNQKLADLS+SPNP+LIDGILLTKFDTIDDKVGAALSMVY+SGAPVMF
Sbjct: 535 LVGNDAVDQLSKFNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMF 594
Query: 566 VGCGQSYTDLKKLNVKSIVKTLLK 589
VGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 595 VGCGQSYTDLKKLNVKSIVKTLLK 618
>gi|225445848|ref|XP_002278056.1| PREDICTED: signal recognition particle receptor subunit alpha
[Vitis vinifera]
Length = 616
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/622 (80%), Positives = 527/622 (84%), Gaps = 39/622 (6%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSG AS+NYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHNELGLVFVAVYQRILHLLYVDDLLAM+K+ FS IYDPKRT Y DFDE FRQLR EA
Sbjct: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMLKREFSVIYDPKRTAYDDFDETFRQLRMEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
EARAEELKKSK V KP+NN KKQG Q+QK G + D + GRK+EN
Sbjct: 121 EARAEELKKSKPVAKPVNNSKKQG-QVQK--VGFEGGNKKKGGSGPGSDGGDGNGRKMEN 177
Query: 181 GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP 240
GH+N GN + E++V VANGKEN SSNIGAFDV+KLQKLR KGGKKTDTVV+KGS DP
Sbjct: 178 GHAN-GNTD--ETKVALVANGKENASSNIGAFDVNKLQKLRAKGGKKTDTVVNKGSKVDP 234
Query: 241 KKKITKKNRVWDDSPPESKLDFTDPAGGNG-SNIEVEAADHGESMMDKEEVFSSDSESEE 299
KKITKKNRVWD SP ESKLDFTDPA NG N + AAD GESMMDKEE+ SS+SE+EE
Sbjct: 235 NKKITKKNRVWDVSPTESKLDFTDPADQNGDENAVIVAADEGESMMDKEEIVSSESETEE 294
Query: 300 DEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------- 352
DEE+ K +K + KK GWFS+MFQSIAGKANL+KADLEPALKALKDRLMTKNVA
Sbjct: 295 DEEMEKDSKMETKKKGWFSAMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEEIAEKL 354
Query: 353 -------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 387
AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV
Sbjct: 355 CESVAASLEGKKLASFTRVSSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 414
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
FVGVNGVGKSTNLAKVAYWLLQH VSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYE
Sbjct: 415 FVGVNGVGKSTNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYE 474
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL+ LNNPDLVLFVGEALV
Sbjct: 475 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLVNLNNPDLVLFVGEALV 534
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GNDAVDQLSKFNQKLADLS+SP PQLIDGILLTKFDTIDDKVGAALSMVY+SGAPVMFVG
Sbjct: 535 GNDAVDQLSKFNQKLADLSTSPKPQLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVG 594
Query: 568 CGQSYTDLKKLNVKSIVKTLLK 589
CGQSYTDLKKLNVKSIVKTLLK
Sbjct: 595 CGQSYTDLKKLNVKSIVKTLLK 616
>gi|297798906|ref|XP_002867337.1| signal recognition particle receptor alpha subunit family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297313173|gb|EFH43596.1| signal recognition particle receptor alpha subunit family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/636 (75%), Positives = 532/636 (83%), Gaps = 50/636 (7%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKE+GNALKGSPIDTLIRSCLLEERSG SFNYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHN+LGLVFVAVYQRILHLLYVDDLL+M+KQSFSEIYDPKR Y DFDE FRQLR EA
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEIYDPKRMAYDDFDETFRQLRIEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNR-SGGGSANDDGDSDNMRGRKLE 179
EARAEEL+K+KQV KP++++KKQG Q+ K G E G+ R S GGS DDGD + + L
Sbjct: 121 EARAEELRKTKQVGKPVSSVKKQG-QVSKPGLEGGNKRVSEGGSKKDDGDGNKAKVSTLT 179
Query: 180 NGHSNVGNVEIEE-SRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGK------KTDTVV 232
NGHSN GN ++E+ S+ T +ANGKENTSSN+ A D+SKLQKLR+KG + KTD++
Sbjct: 180 NGHSN-GNHQMEDDSQETDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTDSIG 237
Query: 233 SKGSN---PDPKKKITKKNRVWDDSPP-ESKLDFTDPAGGNGSN--IEVEAADHGESMMD 286
+K S +P KK TKKNRVWDD+ P +SKLDFTD NG+N +++ AAD GESMMD
Sbjct: 238 NKSSKVAAAEPAKKATKKNRVWDDAAPKQSKLDFTDSIAENGNNDHVDIVAADQGESMMD 297
Query: 287 KEEVFSSDSESEEDEEVGKHNKP-DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
KEEVFSSDSESE+D+E G KP +AKK GWFSS+FQSI GKANL++ DL PALKALK+R
Sbjct: 298 KEEVFSSDSESEDDDEPGSDEKPAEAKKKGWFSSVFQSITGKANLERTDLGPALKALKER 357
Query: 346 LMTKNV--------------------------------AAMEEALVRILTPRRSIDILRD 373
LMTKNV AAME+ALVRILTPRRSIDILRD
Sbjct: 358 LMTKNVVEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRD 417
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL QHKVSVMMAACDTFRSGAVEQLRTH
Sbjct: 418 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTH 477
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
ARRLQ+PIFEKGYEKDPA+VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI L
Sbjct: 478 ARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINL 537
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
N PDLVLFVGEALVGNDAVDQLSKFNQKL+DLS+S NP+LIDGILLTKFDTIDDKVGAAL
Sbjct: 538 NQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAAL 597
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
SMVY+SG+PVMFVGCGQSYTDLKKLNVK+IVKTLLK
Sbjct: 598 SMVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTLLK 633
>gi|15234792|ref|NP_194789.1| signal recognition particle receptor subunit alpha [Arabidopsis
thaliana]
gi|7269961|emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis
thaliana]
gi|18086492|gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana]
gi|22137194|gb|AAM91442.1| AT4g30600/F17I23_60 [Arabidopsis thaliana]
gi|332660385|gb|AEE85785.1| signal recognition particle receptor subunit alpha [Arabidopsis
thaliana]
Length = 634
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/637 (75%), Positives = 527/637 (82%), Gaps = 51/637 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKE+GNALKGSPIDTLIRSCLLEERSG SFNYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHN+LGLVFVAVYQRILHLLYVDDLL+M+KQSFSE+YDPKR Y DFDE FRQLR EA
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQLRIEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNR--SGGGSANDDGDSDN-MRGRK 177
EARAEEL+K+KQV KP+ ++KKQ GQ+ K G E G+ R S GGS DDGD N +
Sbjct: 121 EARAEELRKTKQVGKPVTSVKKQ-GQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAKVST 179
Query: 178 LENGHSNVGNVEIEE--SRVTGVANGKENTSSNIGAFDVSKLQKLRNK------GGKKTD 229
L NGHSN GN ++E+ +ANGKENTSSN+ A D+SKLQKLR+K G +KTD
Sbjct: 180 LTNGHSN-GNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTD 237
Query: 230 TVVSKGSN-PDPKKKITKKNRVWDDSPP-ESKLDFTDPAGGNGSN--IEVEAADHGESMM 285
++ +K S +P KK TKKNRVWDD+ P +SKLDFTD NG+N +++ AAD GESMM
Sbjct: 238 SIGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMM 297
Query: 286 DKEEVFSSDSESEEDEEVGKHNKP-DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKD 344
DKEEVFSSDSESE+D+E G KP AKK GWFSS+FQSI GKANL++ DL PALKALK+
Sbjct: 298 DKEEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKE 357
Query: 345 RLMTKNV--------------------------------AAMEEALVRILTPRRSIDILR 372
RLMTKNV AAME+ALVRILTPRRSIDILR
Sbjct: 358 RLMTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILR 417
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL QHKVSVMMAACDTFRSGAVEQLRT
Sbjct: 418 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRT 477
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HARRLQ+PIFEKGYEKDPA+VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 478 HARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIN 537
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
LN PDLVLFVGEALVGNDAVDQLSKFNQKL+DLS+S NP+LIDGILLTKFDTIDDKVGAA
Sbjct: 538 LNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAA 597
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LSMVY+SG+PVMFVGCGQSYTDLKKLNVK+IVKTLLK
Sbjct: 598 LSMVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTLLK 634
>gi|356517002|ref|XP_003527179.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Glycine max]
Length = 623
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/629 (73%), Positives = 513/629 (81%), Gaps = 46/629 (7%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSG A++NYD+ GA+YTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAAAYNYDAPGASYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHN+LGLVFVAVYQRILHLLYV+DLLAM+K+ FS++YDPK T Y DFDE FRQL+ EA
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVEDLLAMVKREFSQVYDPKTTAYPDFDETFRQLKMEA 120
Query: 121 EARAEELKKSKQVTKPM-NNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLE 179
AR E+LK+S + P+ N KKQ K GFE G+ + G + RKLE
Sbjct: 121 LARTEDLKRSN--SNPVAGNAKKQVQGNDKSGFEGGNKKKKSGGGA----DGDDGKRKLE 174
Query: 180 NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPD 239
NGHSN + +++ ++ NG+ N S N+GAFDV KLQKLR KGGKKTDTVV+K S +
Sbjct: 175 NGHSNGNFLVAKDTNLSRDVNGRHNGSPNVGAFDVHKLQKLRTKGGKKTDTVVAKASKAE 234
Query: 240 PKKKITKKNRVWDDSP-PESKLDFTDPAGGNGS-NIE-VEAADHGESMMDK----EEVFS 292
P KK+TKKNRVWD++ E+KLDFTD +G +G NI+ V AAD GESMMDK
Sbjct: 235 PNKKVTKKNRVWDEAATTETKLDFTDHSGEDGERNIDFVVAADQGESMMDKEEIVSSESE 294
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV- 351
+ E E++E+ GK+ KPDAK GWFSSMFQSIAGKANL+K+DLEPALKALKDRLMTKNV
Sbjct: 295 QEEEDEDEEDAGKNRKPDAKSKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVA 354
Query: 352 -------------------------------AAMEEALVRILTPRRSIDILRDVHAAKEQ 380
AAMEEAL+RILTPRRSIDILRDVHAAKEQ
Sbjct: 355 EEIAEKLCESVAASLEGKKLASFTRISSTVHAAMEEALIRILTPRRSIDILRDVHAAKEQ 414
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ+P
Sbjct: 415 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIP 474
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
IFEKGYEKDPA+VAKEAIQEA+RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL
Sbjct: 475 IFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 534
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FVGEALVGNDAVDQLSKFNQKLADL++SPNP+LIDGILLTKFDTIDDKVGAALSMVY+SG
Sbjct: 535 FVGEALVGNDAVDQLSKFNQKLADLATSPNPRLIDGILLTKFDTIDDKVGAALSMVYISG 594
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
APVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 595 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 623
>gi|357480047|ref|XP_003610309.1| Signal recognition particle receptor subunit alpha [Medicago
truncatula]
gi|355511364|gb|AES92506.1| Signal recognition particle receptor subunit alpha [Medicago
truncatula]
Length = 631
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/646 (71%), Positives = 512/646 (79%), Gaps = 72/646 (11%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILW+C E+GNALKGSPIDTLIRSCLLEERSG +S+NYD+ GAAY+LK
Sbjct: 1 MLEQLLIFTRGGLILWSCNEIGNALKGSPIDTLIRSCLLEERSGASSYNYDAPGAAYSLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHN+LGLVFVAVYQRILHLLYVDDLLA +K+ FS++YDP RT Y DFDE+F+QL+ EA
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLAAVKREFSQVYDPTRTVYRDFDEIFKQLKIEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGD-------SDNM 173
EARAE+LKKS V N +KQ + G + N S GG +DGD S+N
Sbjct: 121 EARAEDLKKSNPVIVGGN--RKQQVTWKGDGSDGKKNGSAGGGLKNDGDGKNGKKNSEND 178
Query: 174 RGRKLENGH-----SN--VGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQK-LRNKGG 225
R + NG+ SN VGNV + NGKEN S N GAFDV++LQK +RNKGG
Sbjct: 179 RSAIVNNGNGYNLRSNGVVGNVSV---------NGKENDSVNNGAFDVNRLQKKVRNKGG 229
Query: 226 --KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGS-----NIEVEAA 278
KKTD VV+K +PKK + KKNRVWD+ P E+KLDFTD +G ++ A
Sbjct: 230 NGKKTDAVVTKA---EPKK-VVKKNRVWDEKPVETKLDFTDHVDIDGDADKDRKVDYLAK 285
Query: 279 DHGESMMDKEEVFSSDSESEEDE---EVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADL 335
+ GESMMDK+E+FSSDSE EED+ GK +KPDAKK GWFSSMFQSIAGKANL+K+DL
Sbjct: 286 EQGESMMDKDEIFSSDSEDEEDDDDDNAGKKSKPDAKKKGWFSSMFQSIAGKANLEKSDL 345
Query: 336 EPALKALKDRLMTKNVA--------------------------------AMEEALVRILT 363
EPALKALKDRLMTKNVA AME+ALVRILT
Sbjct: 346 EPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEDALVRILT 405
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL QH V+VMMAACDTFR
Sbjct: 406 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHNVNVMMAACDTFR 465
Query: 424 SGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
SGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEAIQEA+RNGSDVVLVDTAGRMQDNEPL
Sbjct: 466 SGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPL 525
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS+SP P+LIDGILLTKFD
Sbjct: 526 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPTPRLIDGILLTKFD 585
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
TIDDKVGAALSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 586 TIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 631
>gi|356562565|ref|XP_003549540.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Glycine max]
Length = 626
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/634 (70%), Positives = 495/634 (78%), Gaps = 53/634 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTC L NAL+GSPIDTLIRSCLLEERSG ASFNYD+ GAAY+LK
Sbjct: 1 MLEQLLIFTRGGLILWTCNHLSNALRGSPIDTLIRSCLLEERSGAASFNYDAPGAAYSLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHN+LGLVFVAVYQR+LHLLYVDDLLA +K+ FS +Y P++T Y DFDE+F+QL+ EA
Sbjct: 61 WTFHNDLGLVFVAVYQRVLHLLYVDDLLAAVKREFSRLYHPQKTAYRDFDEIFQQLQIEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
E+R+E KK V N +KQ G Q G G N G DGD +GRKLEN
Sbjct: 121 ESRSENFKKPNPVPALAPN-RKQNGTWQGQGL--GQN--AGSEKKSDGDGK--KGRKLEN 173
Query: 181 GHSNVGNVEIEESRV-----TGVAN--GKENTSSNIGAFDVSKLQKLRNKGGKKT----D 229
+ +V N + + V N GKEN SSN+GAFDV++LQKL+ K G D
Sbjct: 174 DNFSVANSNSNANVNHSGGKSSVNNNIGKENESSNVGAFDVNRLQKLKGKKGNGNGKKKD 233
Query: 230 TVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGS-NIEVEAADHGESMMDKE 288
+V + +PKK + K NRVWD P++KLDFTD G+G + + A + GESMMDKE
Sbjct: 234 ALVVAAAKGEPKK-VDKPNRVWDQPAPQTKLDFTDHVDGDGDRSADFLAKEQGESMMDKE 292
Query: 289 EVFSSDSESEEDEE-VGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLM 347
E+ SSDSE E+D++ GK N P AKK GWFSSMFQSIAGKANL+K+DLEPALKALKDRLM
Sbjct: 293 EILSSDSEVEDDDDDTGKDNMPVAKKKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLM 352
Query: 348 TKNVA--------------------------------AMEEALVRILTPRRSIDILRDVH 375
TKNVA AMEEALVRILTPRRSIDILRDVH
Sbjct: 353 TKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVHTAMEEALVRILTPRRSIDILRDVH 412
Query: 376 AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH VSVMMAACDTFRSGAVEQLRTHAR
Sbjct: 413 AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHAR 472
Query: 436 RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
RLQ+PIFEKGYEKDPAIVAKEAIQEA RNGSDVVLVDTAGRMQDNEPLMRALSKL+YLNN
Sbjct: 473 RLQIPIFEKGYEKDPAIVAKEAIQEAARNGSDVVLVDTAGRMQDNEPLMRALSKLVYLNN 532
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PDL+LFVGEALVGNDAVDQLSKFNQKLADLS+SP P+LIDGILLTKFDTIDDKVGAALSM
Sbjct: 533 PDLILFVGEALVGNDAVDQLSKFNQKLADLSTSPTPRLIDGILLTKFDTIDDKVGAALSM 592
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VYVSGAPVMFVGCGQSYTDLKKLNVKSI KTLLK
Sbjct: 593 VYVSGAPVMFVGCGQSYTDLKKLNVKSIAKTLLK 626
>gi|212275688|ref|NP_001130574.1| signal recognition particle receptor homolog1 [Zea mays]
gi|194689526|gb|ACF78847.1| unknown [Zea mays]
gi|194707804|gb|ACF87986.1| unknown [Zea mays]
gi|414864260|tpg|DAA42817.1| TPA: signal recognition particle receptor-like protein isoform 1
[Zea mays]
gi|414864261|tpg|DAA42818.1| TPA: signal recognition particle receptor-like protein isoform 2
[Zea mays]
Length = 625
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/637 (67%), Positives = 478/637 (75%), Gaps = 60/637 (9%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEERSADASFSQDN----YA 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
LKWTFHN+LGLVFVAVYQ+ILHLLYVDDLLA +++ FS+IYDPKRT Y DF ++FRQL +
Sbjct: 57 LKWTFHNDLGLVFVAVYQKILHLLYVDDLLAAVRKEFSQIYDPKRTSYDDFGDIFRQLHR 116
Query: 119 EAEARAEELKKSKQV--TKPMNNL-KKQGGQLQKGGFERGSNRSGGGS-ANDDGDSD--- 171
EAEAR EE+KKSKQ ++P L +K+ G +GG RG + GGS A DD D D
Sbjct: 117 EAEARTEEMKKSKQALSSRPQPALTQKKPGPKGRGGDSRGGAANKGGSGAKDDSDGDGYG 176
Query: 172 NMRGRKLENG----HSNVGNVEIEESRVTGVANGKENTS-SNIGAFDVSKLQKLR-NKGG 225
N R L NG N E T V GKEN + + GAFDVSKLQKLR NK
Sbjct: 177 NQDHRTLANGAFKGQENGVRKENSSHGRTVVVKGKENGAPKDEGAFDVSKLQKLRANKKN 236
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNI-EVEAADHGESM 284
TD K + PD KKK K++RVWDD P KLDFTDPA G + + A GESM
Sbjct: 237 GATDNGTKKLTKPDIKKK-GKQDRVWDDKPSNKKLDFTDPADERGDEVADNVAVIEGESM 295
Query: 285 MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKD 344
MDK+E SSDSE EE E+ KK GWFSSMFQSI+G L+K+DL+PALKALKD
Sbjct: 296 MDKDEDLSSDSEDEEVED-------GPKKKGWFSSMFQSISGNNVLEKSDLQPALKALKD 348
Query: 345 RLMTKNVA--------------------------------AMEEALVRILTPRRSIDILR 372
RLM KNVA AME+AL+RILTPRRSIDILR
Sbjct: 349 RLMAKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEDALLRILTPRRSIDILR 408
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
DVHAAKE+ +PYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLRT
Sbjct: 409 DVHAAKERGRPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVTLAACDTFRSGAVEQLRT 468
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HARRLQ+PIFEKGYEKDPA+VA+EAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 469 HARRLQIPIFEKGYEKDPAVVAREAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLIN 528
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
LN+PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGAA
Sbjct: 529 LNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTARLIDGILLTKFDTIDDKVGAA 588
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 589 LSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 625
>gi|242037271|ref|XP_002466030.1| hypothetical protein SORBIDRAFT_01g050330 [Sorghum bicolor]
gi|241919884|gb|EER93028.1| hypothetical protein SORBIDRAFT_01g050330 [Sorghum bicolor]
Length = 624
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/637 (66%), Positives = 476/637 (74%), Gaps = 61/637 (9%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEERSADASFSQDN----YA 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
LKWTFHN+LGLVFVAVYQ+ILHLLYVDDLLA +++ FS+IYDPKRT Y DF ++FRQL +
Sbjct: 57 LKWTFHNDLGLVFVAVYQKILHLLYVDDLLAAVRREFSQIYDPKRTSYDDFGDIFRQLHR 116
Query: 119 EAEARAEELKKSKQV--TKPMNNL-KKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
EAEARAEE+KKSKQ ++P L +K+ G + G G+ + GGS D + G
Sbjct: 117 EAEARAEEMKKSKQALSSRPQPALSQKKVGPKGRRGDSHGAAANKGGSGAKDDSDGDDSG 176
Query: 176 RKLENGHSNVGNVEIEESRVTG--------VANGKENTS-SNIGAFDVSKLQKLR-NKGG 225
K +N N G + +E+ V V GKEN + GAFDVSKLQKLR NK
Sbjct: 177 NKDQNTLVN-GAFKGQENGVRKENSLARPVVVKGKENGGPKDNGAFDVSKLQKLRTNKKN 235
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNI-EVEAADHGESM 284
D K + PD KKK K++RVWDD P KLDFTDPA G + + A GESM
Sbjct: 236 VAADNGTKKLTKPDTKKK-GKQDRVWDDKPSNKKLDFTDPADERGDEVTDNVAVIEGESM 294
Query: 285 MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKD 344
MDK+E SSDSE EE E+ KK GWFSSMFQSIAG L+K+DL+PALKALKD
Sbjct: 295 MDKDEDLSSDSEDEEVED-------GPKKKGWFSSMFQSIAGNNVLEKSDLQPALKALKD 347
Query: 345 RLMTKNVA--------------------------------AMEEALVRILTPRRSIDILR 372
RLM KNVA AME+AL+RILTPRRSIDILR
Sbjct: 348 RLMAKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEDALLRILTPRRSIDILR 407
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
DVHAAKE+ +PYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLRT
Sbjct: 408 DVHAAKERGRPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVTLAACDTFRSGAVEQLRT 467
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HARRLQ+PIFEKGYEKDPA+VA+EAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 468 HARRLQIPIFEKGYEKDPAVVAREAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLIN 527
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
LN+PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGAA
Sbjct: 528 LNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTARLIDGILLTKFDTIDDKVGAA 587
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 588 LSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 624
>gi|115476922|ref|NP_001062057.1| Os08g0480100 [Oryza sativa Japonica Group]
gi|42408581|dbj|BAD09758.1| putative signal recognition particle receptor [Oryza sativa
Japonica Group]
gi|42409015|dbj|BAD10268.1| putative signal recognition particle receptor [Oryza sativa
Japonica Group]
gi|113624026|dbj|BAF23971.1| Os08g0480100 [Oryza sativa Japonica Group]
gi|125561923|gb|EAZ07371.1| hypothetical protein OsI_29622 [Oryza sativa Indica Group]
gi|215678702|dbj|BAG95139.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/638 (65%), Positives = 475/638 (74%), Gaps = 63/638 (9%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQDT----YA 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD-FDEMFRQLR 117
LKWTF+N+LGLVFVAVYQR+LHLLYVDDLLA +++ FS+IYDPKRT Y D F+E+FRQL
Sbjct: 57 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVFRQLH 116
Query: 118 KEAEARAEELKKSKQVT--KPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
EAEAR+EE+KK+KQVT +P K RG + GG +
Sbjct: 117 LEAEARSEEMKKNKQVTGSRPTKVTTKTN---------RGDTQGSGGGRKKGDSGKDDSD 167
Query: 176 RKLENGHS-NVGNVEIEESRV-------TGVANGKENTSSNIGAFDVSKLQKLRNKGGKK 227
H+ GN +++E+ + + V GKEN N GAFDV+KLQK+RNKG KK
Sbjct: 168 GDSGKEHTLPNGNSKMQENSLKDNSHARSVVVKGKENGDPNDGAFDVNKLQKMRNKGNKK 227
Query: 228 TDTV--VSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSN-IEVEAADHGES 283
+ V+K ++ KK KKNRVWDD+P + K LDFTDPA G I+ GES
Sbjct: 228 NEVASNVAKNTSKANTKKNLKKNRVWDDTPDDKKKLDFTDPADERGDEVIDQVVVKQGES 287
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALK 343
MMDK++V S EE+E+ +++ KK GWFSSMF+SIAG L+K+D++PALKALK
Sbjct: 288 MMDKDDV-VSSDSDEEEEDGEENSGASQKKKGWFSSMFKSIAGNNVLEKSDIQPALKALK 346
Query: 344 DRLMTKNVA--------------------------------AMEEALVRILTPRRSIDIL 371
DRLMTKNVA AMEEAL+RILTPRRSIDIL
Sbjct: 347 DRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDIL 406
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
RDVHAAKE+ KPYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLR
Sbjct: 407 RDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVSLAACDTFRSGAVEQLR 466
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
THARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 467 THARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLI 526
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
LN+PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGA
Sbjct: 527 NLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTTRLIDGILLTKFDTIDDKVGA 586
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 587 ALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 624
>gi|222640745|gb|EEE68877.1| hypothetical protein OsJ_27689 [Oryza sativa Japonica Group]
Length = 1103
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/638 (64%), Positives = 474/638 (74%), Gaps = 63/638 (9%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIF RGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 480 MLEELLIFKRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQDT----YA 535
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD-FDEMFRQLR 117
LKWTF+N+LGLVFVAVYQR+LHLLYVDDLLA +++ FS+IYDPKRT Y D F+E+FRQL
Sbjct: 536 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVFRQLH 595
Query: 118 KEAEARAEELKKSKQVT--KPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
EAEAR+EE+KK+KQVT +P K RG + GG +
Sbjct: 596 LEAEARSEEMKKNKQVTGSRPTKVTTKT---------NRGDTQGSGGGRKKGDSGKDDSD 646
Query: 176 RKLENGHS-NVGNVEIEESRV-------TGVANGKENTSSNIGAFDVSKLQKLRNKGGKK 227
H+ GN +++E+ + + V GKEN N GAFDV+KLQK+RNKG KK
Sbjct: 647 GDSGKEHTLPNGNSKMQENSLKDNSHARSVVVKGKENGDPNDGAFDVNKLQKMRNKGNKK 706
Query: 228 TDTV--VSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSN-IEVEAADHGES 283
+ V+K ++ KK KKNRVWDD+P + K LDFTDPA G I+ GES
Sbjct: 707 NEVASNVAKNTSKANTKKNLKKNRVWDDTPDDKKKLDFTDPADERGDEVIDQVVVKQGES 766
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALK 343
MMDK++V S EE+E+ +++ KK GWFSSMF+SIAG L+K+D++PALKALK
Sbjct: 767 MMDKDDV-VSSDSDEEEEDGEENSGASQKKKGWFSSMFKSIAGNNVLEKSDIQPALKALK 825
Query: 344 DRLMTKNVA--------------------------------AMEEALVRILTPRRSIDIL 371
DRLMTKNVA AMEEAL+RILTPRRSIDIL
Sbjct: 826 DRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDIL 885
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
RDVHAAKE+ KPYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLR
Sbjct: 886 RDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVSLAACDTFRSGAVEQLR 945
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
THARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 946 THARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLI 1005
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
LN+PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGA
Sbjct: 1006 NLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTTRLIDGILLTKFDTIDDKVGA 1065
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 1066 ALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 1103
>gi|357114474|ref|XP_003559025.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog [Brachypodium distachyon]
Length = 623
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/641 (65%), Positives = 476/641 (74%), Gaps = 70/641 (10%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPIDALIRSCLLEERSADASFSQDT----YA 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
LKWTF+N+LGLVFVAVYQR+LHLLYVDDLLA +++ FS+IYDPKR Y F ++FRQL
Sbjct: 57 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRVSYDGFGDVFRQLHL 116
Query: 119 EAEARAEELKKSKQ---VTKPM----------NNLKKQGGQLQKGGFERGSNRSGGGSAN 165
EAEAR E ++KSKQ V++ + G LQ+ E G + S GG +
Sbjct: 117 EAEARGEAMRKSKQQNSVSRVVPAGAAAAGGGGKKSGARGGLQRKSSESGKDDSDGGDSR 176
Query: 166 DDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ-KLRNKG 224
+ N G + G N N +R V NGKEN N GAFDV+ L+ K+ NKG
Sbjct: 177 KEHGLTN--GTSVAKGQENKDN---SHARADVVVNGKENGDPNDGAFDVNTLRRKMGNKG 231
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPES-KLDFTDPAGGNGSNIEVEAADH-GE 282
GKK D V K +PK+ + K+NRVWDD P ++ KLDFTDPA G + +A H G+
Sbjct: 232 GKKND--VKKVPKAEPKRNV-KQNRVWDDKPKKNEKLDFTDPADERGDEVTEQALVHQGD 288
Query: 283 SMMDKEEVFSSDSESEE--DEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALK 340
SMMDK+E+ SSDSE +E + E G+ KK GWFSSMF+SI+G L+KADL+PALK
Sbjct: 289 SMMDKDEIVSSDSEDDEEENAEAGQ------KKKGWFSSMFKSISGNNVLEKADLQPALK 342
Query: 341 ALKDRLMTKNVA--------------------------------AMEEALVRILTPRRSI 368
ALKDRLMTKNVA AMEEAL+RILTPRRSI
Sbjct: 343 ALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSI 402
Query: 369 DILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 428
DILRDVHAAKE+ KPYVVVFVGVNGVGKSTNLAKVAYWLLQH +SVM+AACDTFRSGAVE
Sbjct: 403 DILRDVHAAKERGKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNLSVMLAACDTFRSGAVE 462
Query: 429 QLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
QLRTHARRLQ+PIFEKGYEKDPA+VAKEAI EATRN SDVVLVDTAGRMQDNEPLMRALS
Sbjct: 463 QLRTHARRLQIPIFEKGYEKDPAVVAKEAIHEATRNKSDVVLVDTAGRMQDNEPLMRALS 522
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
KLI LN+PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDK
Sbjct: 523 KLINLNSPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDK 582
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VGAALSMVY+SG+PVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 583 VGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 623
>gi|42408582|dbj|BAD09759.1| putative signal recognition particle receptor [Oryza sativa
Japonica Group]
gi|42409016|dbj|BAD10269.1| putative signal recognition particle receptor [Oryza sativa
Japonica Group]
Length = 610
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/638 (63%), Positives = 464/638 (72%), Gaps = 77/638 (12%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALKGSPID--------------ASFSQDT----YA 42
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD-FDEMFRQLR 117
LKWTF+N+LGLVFVAVYQR+LHLLYVDDLLA +++ FS+IYDPKRT Y D F+E+FRQL
Sbjct: 43 LKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSYDDAFNEVFRQLH 102
Query: 118 KEAEARAEELKKSKQVT--KPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
EAEAR+EE+KK+KQVT +P K RG + GG +
Sbjct: 103 LEAEARSEEMKKNKQVTGSRPTKVTTKTN---------RGDTQGSGGGRKKGDSGKDDSD 153
Query: 176 RKLENGHS-NVGNVEIEESRV-------TGVANGKENTSSNIGAFDVSKLQKLRNKGGKK 227
H+ GN +++E+ + + V GKEN N GAFDV+KLQK+RNKG KK
Sbjct: 154 GDSGKEHTLPNGNSKMQENSLKDNSHARSVVVKGKENGDPNDGAFDVNKLQKMRNKGNKK 213
Query: 228 TDTV--VSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSN-IEVEAADHGES 283
+ V+K ++ KK KKNRVWDD+P + K LDFTDPA G I+ GES
Sbjct: 214 NEVASNVAKNTSKANTKKNLKKNRVWDDTPDDKKKLDFTDPADERGDEVIDQVVVKQGES 273
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALK 343
MMDK++V S EE+E+ +++ KK GWFSSMF+SIAG L+K+D++PALKALK
Sbjct: 274 MMDKDDV-VSSDSDEEEEDGEENSGASQKKKGWFSSMFKSIAGNNVLEKSDIQPALKALK 332
Query: 344 DRLMTKNVA--------------------------------AMEEALVRILTPRRSIDIL 371
DRLMTKNVA AMEEAL+RILTPRRSIDIL
Sbjct: 333 DRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDIL 392
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
RDVHAAKE+ KPYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLR
Sbjct: 393 RDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVSLAACDTFRSGAVEQLR 452
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
THARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 453 THARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLI 512
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
LN+PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGA
Sbjct: 513 NLNSPDLVLFVGEALVGNDAVDQLTKFNQKLADLSAVPTTRLIDGILLTKFDTIDDKVGA 572
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 573 ALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 610
>gi|326504320|dbj|BAJ90992.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/646 (63%), Positives = 463/646 (71%), Gaps = 71/646 (10%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA--LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY 57
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERSG A F D AY
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGGAALLKGSPIDALIRSCLLEERSGDAGFTQD----AY 56
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD-FDEMFRQL 116
LKWTF+N+LGLVFVAVYQR+LHLLYVDDLLA +++ FS+IY+P R Y F + FRQL
Sbjct: 57 ALKWTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRRDFSQIYNPNRISYDHLFTDKFRQL 116
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA-------NDDGD 169
EAEARAE +KK++Q +++ GG++ + GSN GGG + DGD
Sbjct: 117 HLEAEARAEAMKKTRQQPTALSS-SAAGGKVGAASKKLGSNARGGGKKNSGSGKDDSDGD 175
Query: 170 SDNMRGRKLENG----HSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGG 225
S NG H N + V GKEN N GAFDV+ L+K
Sbjct: 176 SGKEHNGYTANGADGAHENGSHARAAALVVNNA--GKENGDPNDGAFDVNTLRKKTGGKK 233
Query: 226 KKTDTV---VSKGSNPDPKKKITKKNRVWDDSPPES-KLDFTDPAGGNGSN-IEVEAADH 280
V K + +PKK + K+ RVWDD PP++ KLDFTDPA G IE +
Sbjct: 234 GGGGGKKIDVKKVAKTEPKKAV-KQMRVWDDKPPKNEKLDFTDPADERGDEVIEKVLTNQ 292
Query: 281 GESMMDKEEVFSSDSESEE-----DEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADL 335
G+SMMDK+E SSDSE EE + E G+ KK GWFSSMF+SIAG L+K+DL
Sbjct: 293 GDSMMDKDEDLSSDSEDEEEEEEENAEAGQ------KKKGWFSSMFKSIAGNNVLEKSDL 346
Query: 336 EPALKALKDRLMTKNVA--------------------------------AMEEALVRILT 363
+PALKALKDRLMTKNVA AMEEAL+RILT
Sbjct: 347 QPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILT 406
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
PRRSIDILRDV AAKE+ KPYVVVFVGVNGVGKSTNLAKVAYWLLQH +SVMMAACDTFR
Sbjct: 407 PRRSIDILRDVQAAKERGKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNLSVMMAACDTFR 466
Query: 424 SGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
SGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVDTAGRMQDNEPL
Sbjct: 467 SGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPL 526
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
MRALSKLI LN PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFD
Sbjct: 527 MRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFD 586
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
TIDDKVGAALSMVY+SG+PVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 587 TIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 632
>gi|168057840|ref|XP_001780920.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667633|gb|EDQ54258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 633
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/652 (58%), Positives = 453/652 (69%), Gaps = 84/652 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQ LIFTRGGL+LW+C E+G ALKGSP+D LI++CLLEER+G +SF YD+AGA YTLK
Sbjct: 1 MLEQFLIFTRGGLVLWSCLEVGKALKGSPVDALIKTCLLEERAGDSSFQYDAAGAGYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
W FHNELGLVFVAVYQR+LHLLYVD+LL + + FS ++ P RT Y DFD+ +RQL K A
Sbjct: 61 WRFHNELGLVFVAVYQRMLHLLYVDELLEKVMREFSILFVPTRTVYHDFDDTYRQLLKAA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
EA + ++ Q + + + G GSN G A++DG++D + +
Sbjct: 121 EANSHFKPRNAQTGRKSD---------KSAGKSSGSNDDG---ADEDGEADGSKFGPV-- 166
Query: 181 GHSN-VGNVEIEESRVTGVANGKE----------------NTSSNIGAFDVSKLQKLRNK 223
G+SN GN ++ G+ + K + +S+ AFDVSKL KLRN
Sbjct: 167 GYSNGTGNGHANGNKANGLGSTKSGRSSASGSSSDEDSVAHKTSSENAFDVSKLAKLRNN 226
Query: 224 GGKKTDTVVS--KGSNPDP--KKKITKKNRVWDDSPPESKLDFTDPA----GGNGSNIEV 275
KK + + KG++ D KK KKNRVW D+PP SKLDFTDP G +G +I V
Sbjct: 227 KSKKATSGMEGPKGTSKDDAVSKKPQKKNRVWGDAPPPSKLDFTDPVSVDQGDDGVDIAV 286
Query: 276 EAADHGESMMDKEEVFSSDSESEEDE----EVGKHN--KPDAKKTGWFSSMFQSIAGKAN 329
+ G S+MDK++ D ES E EV K N K A K GW +S+ QS+AGK
Sbjct: 287 --VEKGLSLMDKDD----DDESFRVEDMMVEVEKENGGKKAASKKGWLTSLVQSVAGKPA 340
Query: 330 LDKADLEPALKALKDRLMTKNVAA--------------------------------MEEA 357
L+ ADLEPALK K+RLMTKNVAA MEE+
Sbjct: 341 LEYADLEPALKIFKERLMTKNVAADIAEKLCDSVAASLVGKKQGSFTRITTTVQAAMEES 400
Query: 358 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
LVRILTP+RS+DILRDVH AKE +PY +VFVGVNGVGKSTNLAKVAYWL QH + VMMA
Sbjct: 401 LVRILTPKRSVDILRDVHQAKEVGRPYTIVFVGVNGVGKSTNLAKVAYWLQQHDIKVMMA 460
Query: 418 ACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
ACDTFRSGAVEQLRTHARRLQ+PIFE+GYEKDPA+VA++AI EA R DVVLVDTAGRM
Sbjct: 461 ACDTFRSGAVEQLRTHARRLQIPIFERGYEKDPAVVARDAIYEAKRTKQDVVLVDTAGRM 520
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL-SSSPNPQLIDG 536
QDNEPLMRALSKLI +N+PDLVLFVGEALVGND V QL++FNQKLADL S+S Q IDG
Sbjct: 521 QDNEPLMRALSKLINMNDPDLVLFVGEALVGNDGVHQLTQFNQKLADLSSTSSQTQSIDG 580
Query: 537 ILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ILLTKFDTIDDKVGAALSMVY SGAPVMFVGCGQ+YTDLKKLN+KS++K+LL
Sbjct: 581 ILLTKFDTIDDKVGAALSMVYTSGAPVMFVGCGQNYTDLKKLNIKSVMKSLL 632
>gi|302767828|ref|XP_002967334.1| hypothetical protein SELMODRAFT_439853 [Selaginella moellendorffii]
gi|300165325|gb|EFJ31933.1| hypothetical protein SELMODRAFT_439853 [Selaginella moellendorffii]
Length = 609
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/633 (58%), Positives = 446/633 (70%), Gaps = 68/633 (10%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILW+CKE+GNALKGSPIDTLIRSCLLEERSG SF YD+ GA+YTLK
Sbjct: 1 MLEQLLIFTRGGLILWSCKEIGNALKGSPIDTLIRSCLLEERSGDRSFRYDAPGASYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTF NELGLVFVAVYQ+ L LLYVD+LLAM+K+ FS +Y P++ Y DFDE++RQL KEA
Sbjct: 61 WTFQNELGLVFVAVYQQFLQLLYVDELLAMVKRDFSAVYSPRKASYRDFDEVYRQLEKEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA------NDDGDSDNMR 174
AR E K + + + + + L+ G RGS + G+ DD +D+
Sbjct: 121 LARGEANKGLNKANRKIEDGSSKNTDLRGGTVLRGSVKGSAGTKGQKDGKEDDSAADHKP 180
Query: 175 GRKLEN-GHSNVGNVEIEESRVTGVANGKENTSSNIG-----AFDVSKLQKLRNKGGKKT 228
++ GH N GV NGK ++S AFD SKLQKL+ KGGKKT
Sbjct: 181 AAVVDKAGHEN------------GVTNGKLSSSDEESKPVEVAFDRSKLQKLKAKGGKKT 228
Query: 229 DTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKE 288
+ V + +P K K +K WD +P KLD+++P VE HG+S++D E
Sbjct: 229 NAVKKEKEDPKKKVKQDRKP--WD-APATGKLDYSEPVRDTNDEEVVEV--HGKSLVDYE 283
Query: 289 EVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMT 348
E SD E + K AKK GWFSS+FQS+ GKA L+KADL PA+KALKDRLMT
Sbjct: 284 EDEESDDEEAK------DEKAPAKK-GWFSSVFQSVTGKAALEKADLVPAMKALKDRLMT 336
Query: 349 KNVA--------------------------------AMEEALVRILTPRRSIDILRDVHA 376
KNVA AM +AL+RILTP+RSIDILRDV +
Sbjct: 337 KNVAEEIAEKICESVAASLLGKKLGTFTRVSSAVKEAMGDALLRILTPKRSIDILRDVKS 396
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK++ +PYV+VFVGVNGVGKST+LAKVAYWL H++SV++AACDTFRSGAVEQLRTHA+R
Sbjct: 397 AKDEGRPYVIVFVGVNGVGKSTSLAKVAYWLKSHELSVLIAACDTFRSGAVEQLRTHAKR 456
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
LQ ++EKGYEKDPA VA+EAI A + DVVLVDTAGRMQDNEPLMRAL+ LI +N P
Sbjct: 457 LQTTLYEKGYEKDPANVAREAIATAAKTKHDVVLVDTAGRMQDNEPLMRALANLINVNKP 516
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
DLVLFVGEALVGN+AVDQLSKFNQ LADLS++ + IDGILLTKFDTIDDKVGAALSMV
Sbjct: 517 DLVLFVGEALVGNEAVDQLSKFNQTLADLSATAKRKPIDGILLTKFDTIDDKVGAALSMV 576
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
YVSGAP+MF+GCGQSY DL++LNVKSI+KTLL+
Sbjct: 577 YVSGAPIMFLGCGQSYHDLRRLNVKSIIKTLLQ 609
>gi|302753916|ref|XP_002960382.1| hypothetical protein SELMODRAFT_75660 [Selaginella moellendorffii]
gi|300171321|gb|EFJ37921.1| hypothetical protein SELMODRAFT_75660 [Selaginella moellendorffii]
Length = 633
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/657 (56%), Positives = 445/657 (67%), Gaps = 92/657 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILW+CKE+GNALKGSPIDTLIRSCLLEERSG SF YD+ GA+YTLK
Sbjct: 1 MLEQLLIFTRGGLILWSCKEIGNALKGSPIDTLIRSCLLEERSGDRSFRYDAPGASYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTF NELGLVFVAVYQ+ L LLYVD+LLAM+K+ FS +Y P++ Y DFDE++RQL KEA
Sbjct: 61 WTFQNELGLVFVAVYQQFLQLLYVDELLAMVKREFSAVYSPRKASYRDFDEVYRQLEKEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA------NDDGDSDNMR 174
AR E K + + + + + L+ G RGS + G+ DD +D+
Sbjct: 121 LARGEANKGLNKANRKIEDGSSKNTDLRGGTVLRGSVKGSAGTKGQKDGKEDDSAADHKP 180
Query: 175 GRKLEN-GHSNVGNVEIEESRVTGVANGKENTSSNIG-----AFDVSKLQKLRNKGGKKT 228
+E GH N GV NGK ++S AFD SKLQKL+ KGGKKT
Sbjct: 181 AAVVEKAGHEN------------GVTNGKLSSSDEESKPVEVAFDRSKLQKLKAKGGKKT 228
Query: 229 DTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKE 288
+ + +P K K +K WD +P KLD+++P VE HG+S++
Sbjct: 229 NAAKKEKEDPKKKVKQDRKP--WD-APATGKLDYSEPVRDTNDEEVVEV--HGKSLV--- 280
Query: 289 EVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMT 348
+ + E D+E K K AKK GWFSS+FQS+ GKA L+KADL PA+KALKDRLMT
Sbjct: 281 ---DYEEDEESDDEEAKDEKAPAKK-GWFSSVFQSVTGKAALEKADLVPAMKALKDRLMT 336
Query: 349 KNVA--------------------------------AMEEALVRILTPRRSIDILRDVHA 376
KNVA AM +AL+RILTP+RSIDILRDV +
Sbjct: 337 KNVAEEIAEKICESVAASLLGKKLGTFTRVSSAVKEAMGDALLRILTPKRSIDILRDVKS 396
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK++ +PYV+VFVGVNGVGKST+LAKVAYWL H++SV++AACDTFRSGAVEQLRTHA+R
Sbjct: 397 AKDEGRPYVIVFVGVNGVGKSTSLAKVAYWLKSHELSVLIAACDTFRSGAVEQLRTHAKR 456
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM------------------- 477
LQ ++EKGYEKDPA VA+EAI A + DVVLVDTAGRM
Sbjct: 457 LQTTLYEKGYEKDPANVAREAIATAAKTKHDVVLVDTAGRMQASFSKLCFSLFSLRSYNT 516
Query: 478 -----QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
QDNEPLMRAL+ LI +N PDLVLFVGEALVGN+AVDQLSKFNQ LADLS++ +
Sbjct: 517 YVFFFQDNEPLMRALANLINVNKPDLVLFVGEALVGNEAVDQLSKFNQTLADLSATAKRK 576
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDGILLTKFDTIDDKVGAALSMVYVSGAP+MF+GCGQSY DL++LNVKSI+KTLL+
Sbjct: 577 PIDGILLTKFDTIDDKVGAALSMVYVSGAPIMFLGCGQSYHDLRRLNVKSIIKTLLQ 633
>gi|326524808|dbj|BAK04340.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 606
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/637 (57%), Positives = 425/637 (66%), Gaps = 79/637 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLE+LLIFTRGGLILW+ ALKGSPID L+RS LLE RS A F + Y L+
Sbjct: 1 MLEELLIFTRGGLILWSLAGAAAALKGSPIDALVRSFLLEGRSASAGFTH----GPYALR 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
W + N LGLV +AVY+R+LHLLYVDDLLA + F+ IY P+R Y +F E FRQL EA
Sbjct: 57 WAYDNALGLVLIAVYRRVLHLLYVDDLLAAISAEFARIYHPRRASYDEFGERFRQLHLEA 116
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQ-----KGGFERGSNRSGGGSANDDGDSDNMRG 175
EARA P ++ G LQ GG ++G S DD D + R
Sbjct: 117 EARASRPHSVSAKPGPADS---SPGALQLNGGGGGGGGGEGEKTGDESGKDDSDGEPSR- 172
Query: 176 RKLENGHSNVGNVE---IEESRVTG----VANGKENTSSNIGAFDVSKLQKL---RNKGG 225
+ HS+ + +EE+ G V +E SN GAF+ ++K RN
Sbjct: 173 ---QEEHSSAADGSFNGVEENSDAGHGGAVVRTEEEGGSNNGAFNFENIKKSLFPRNDKD 229
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMM 285
K+ D KG K T ++ D P E KLD+++PA E A + G+SMM
Sbjct: 230 KR-DKPPHKGKKQRLGKDQTPVSK--DKKPSEKKLDYSNPADHGRRAGEQTAVNQGKSMM 286
Query: 286 DKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGK-ANLDKADLEPALKALKD 344
DK+E S + K GWFSSMF+SIAG A L+++DL+PALK+LKD
Sbjct: 287 DKDEAVRSTT-----------------KDGWFSSMFRSIAGSNAELEESDLQPALKSLKD 329
Query: 345 RLMTKNVA--------------------------------AMEEALVRILTPRRSIDILR 372
RLMTKNVA AMEEALVRILTPRRSID+LR
Sbjct: 330 RLMTKNVAEEIAEKLCESVAASLLGKKLGSFTRISSSVQTAMEEALVRILTPRRSIDVLR 389
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
DVHAAK++ PYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLRT
Sbjct: 390 DVHAAKDRGTPYVIVFVGVNGVGKSTNLAKVAYWLLQHDLSVTLAACDTFRSGAVEQLRT 449
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HARRLQ+PIFEKGYE+DPA+VAK AIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 450 HARRLQIPIFEKGYERDPAVVAKGAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLIN 509
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
LNNPDLVLFVGEALVGNDAVDQL+KF+QKLADLS++P + IDGILLTKFDTIDDKVGAA
Sbjct: 510 LNNPDLVLFVGEALVGNDAVDQLTKFSQKLADLSTAPTARSIDGILLTKFDTIDDKVGAA 569
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV TLL+
Sbjct: 570 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVNTLLE 606
>gi|357142643|ref|XP_003572642.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Brachypodium distachyon]
Length = 582
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 368/625 (58%), Positives = 422/625 (67%), Gaps = 79/625 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERS--GLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ G+ LKGSPID L+RS LLE RS G A F++ +
Sbjct: 1 MLEELLIFTRGGLILWSLAG-GDVLKGSPIDALVRSILLEGRSAGGGAGFSH----GQHK 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
L+W FHN LGL FVAVY+R+LHLLYVDDLLA + FS IYDP+RT Y +F E FR+L
Sbjct: 56 LQWAFHNALGLAFVAVYRRVLHLLYVDDLLAAVSGEFSRIYDPRRTSYDEFGERFRELHL 115
Query: 119 EAEARAEELKKSKQVTKPMNNLKKQGG-QLQKGGFERGSNRSGGGSANDDGDSDNMRGRK 177
EAEARA + K G Q G E+ + SG G + D S R
Sbjct: 116 EAEARASRPPPAAPAPKKPAPGTPVGFLQGDDDGGEKTGDASGVGDSGDGLSSAEGRFSG 175
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSN 237
+E S V +EE V G SN AF+ L LRN+ K+ +V K
Sbjct: 176 VEQNSSAGSGVVLEEEEVKG-------RPSNW-AFN---LDVLRNRDRKRNKNIV-KFVK 223
Query: 238 PDPKKKITKKNRVWDDSPPESKLDFTDPAGGNG-SNIEVEAADHGESMMDKEEVFSSDSE 296
P K+K DD+P KLD++DPA G S +E AA+ G S MDK E S
Sbjct: 224 PGRKEK--------DDTPSVKKLDYSDPADGREVSVMEQAAANQGPSKMDKPEAAS---- 271
Query: 297 SEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---- 352
+K GWFSS+FQSIAG L+ +DL+PALKALKD+LMTKNVA
Sbjct: 272 --------------IRKNGWFSSVFQSIAGSHVLEDSDLQPALKALKDQLMTKNVAEEIA 317
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPY 384
AME+ALVRILTPRRSID+LRDVHAAKE+ +PY
Sbjct: 318 EKLCESVAASLRGKKLGSFTRISSTVQAAMEDALVRILTPRRSIDVLRDVHAAKERGRPY 377
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V+VFVGVNGVGKSTNLAKVAYWLLQH ++VM+AACD FRSGAVEQL THA RLQ+PIFEK
Sbjct: 378 VIVFVGVNGVGKSTNLAKVAYWLLQHDLTVMLAACDAFRSGAVEQLCTHACRLQIPIFEK 437
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GYEKDPA+VAK AIQEAT+N SDVVLVDTAGRMQDNEPLMRALSKLI LNNPDLVLFVGE
Sbjct: 438 GYEKDPAVVAKGAIQEATQNKSDVVLVDTAGRMQDNEPLMRALSKLINLNNPDLVLFVGE 497
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVGNDAVDQL+KF+QKL DLS++P + IDGILLTKFDTIDDKVGAALSMVYVSGAPVM
Sbjct: 498 ALVGNDAVDQLTKFDQKLTDLSTAPTDRSIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 557
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLLK 589
FVGCGQSYTDLKKLN+KSIV TLL+
Sbjct: 558 FVGCGQSYTDLKKLNIKSIVNTLLE 582
>gi|168029678|ref|XP_001767352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681416|gb|EDQ67843.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 591
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 339/629 (53%), Positives = 410/629 (65%), Gaps = 80/629 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQ LIFTRGGL+LW+C ELG ALKGSP R G SF Y++AGA YTLK
Sbjct: 1 MLEQFLIFTRGGLVLWSCLELGKALKGSP------------RGGDCSFQYNAAGAGYTLK 48
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
W F+NELGLVFVA+YQRILHLLYVD+LL + + FS ++ RT Y DFD+ +RQL KE
Sbjct: 49 WRFYNELGLVFVAIYQRILHLLYVDELLEKVMREFSNLFVSARTVYHDFDDTYRQLVKET 108
Query: 121 EA-----RAEELKKSKQVTKPMNNLKKQGGQLQKGG-FERGSNRSGGGSANDDGDSDNMR 174
EA RA +L+ + +K + + G L+KGG R + S A++DG+ D ++
Sbjct: 109 EANSQSKRAGQLRSLENSSKGSHRQARHGQILKKGGKSARKFSESKDDGADEDGEEDGIK 168
Query: 175 GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSK 234
H +V + + N S+ AFDV+ G + V SK
Sbjct: 169 SGSEGTDHGHV------------IQDSTANWVSHDNAFDVT-------SSGFECLKVASK 209
Query: 235 GSNPDPKKKITKKNRVWDDSPPESKLDFTDP--AGGNGSNIEVEAADHGESMMDKEEVFS 292
KK KKNRVW +PP SKLDFT A ++++ A + G S+MD+++
Sbjct: 210 --EDAGSKKTMKKNRVW--APPPSKLDFTSHVFADQGKKSVDIVAVEKGLSLMDEDD--- 262
Query: 293 SDSES------EEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALK--- 343
D ES ED E K GW +S+ QSIA KA L+ DLEPALK L
Sbjct: 263 -DDESFRVGDIVEDLEKESRTTESGTKKGWLTSLVQSIAVKATLEYVDLEPALKILTKNV 321
Query: 344 ------------------------DRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKE 379
R+ T AAMEEALVRILTP+RS+DIL D+H KE
Sbjct: 322 ATDIAEKLCESVAASLVGKQQGSFTRISTTVQAAMEEALVRILTPKRSVDILGDIHQDKE 381
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+PY +VFVGVNGVGKSTNLAKVAYWL QH + VMMAACDTFRSGAVEQLRTHARRLQ+
Sbjct: 382 TGRPYTIVFVGVNGVGKSTNLAKVAYWLQQHDIKVMMAACDTFRSGAVEQLRTHARRLQI 441
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
PIF++GYE+DPA+VA++AI ++ R DVVL+DTAGRMQDNEPLMRALSKLI +N PDLV
Sbjct: 442 PIFQRGYERDPAVVARDAIYDSKRTKQDVVLIDTAGRMQDNEPLMRALSKLINMNGPDLV 501
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFVGEALVGND V QL++FNQKLADLS+S Q IDGILLTKFDT +DKVGAALSMVY S
Sbjct: 502 LFVGEALVGNDGVHQLTQFNQKLADLSTSSQTQSIDGILLTKFDTNNDKVGAALSMVYTS 561
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GAPVMFVGCGQ+YTDLKKLNVKS++K+LL
Sbjct: 562 GAPVMFVGCGQNYTDLKKLNVKSVMKSLL 590
>gi|242086847|ref|XP_002439256.1| hypothetical protein SORBIDRAFT_09g003220 [Sorghum bicolor]
gi|241944541|gb|EES17686.1| hypothetical protein SORBIDRAFT_09g003220 [Sorghum bicolor]
Length = 588
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 345/632 (54%), Positives = 413/632 (65%), Gaps = 87/632 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLE+LLIFTRGGLILW G SP+D LIR+CLLEERS + LK
Sbjct: 1 MLEELLIFTRGGLILWALSGGGGGKG-SPVDALIRNCLLEERSAGGDGPGFFQDGKHALK 59
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
W FHN LGLVFVAVY+R+L LLYVDDLLA ++ F+ +Y PKRT Y F ++FRQL EA
Sbjct: 60 WAFHNGLGLVFVAVYRRVLRLLYVDDLLAAVRAEFARVYHPKRTTYDGFGDVFRQLHLEA 119
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
+ARAEE+ ++ KP++ + N GDS E+
Sbjct: 120 QARAEEMSRANNKQKPVDAASPHRRPRPQPPVVH----------NSPGDS--------ES 161
Query: 181 GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR----NKGGKKTDTVVSKGS 236
+ ++ GV+ KE + AFD+S LR ++ KT+T
Sbjct: 162 DGNGGNGDGSKKDSSDGVSGEKEEEKEDGQAFDLSFFSNLRTRFTHRNKDKTNT------ 215
Query: 237 NPDPKKKITKKNRVWDDSPPES---KLDFTDP--AGGNGSNIEVEAADHGESMMDKEEVF 291
N KK + K+ D + E KLDF+DP A N V + G+S +D
Sbjct: 216 NKPIKKDVNKRKNPRDGNNNEHSDRKLDFSDPTDASKQTDNARV---NQGQSKVDL---- 268
Query: 292 SSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAG-KANLDKADLEPALKALKDRLMTKN 350
+E+ ED G K GWFSS+FQSIAG + ++++DL+PALKALKDRLMTKN
Sbjct: 269 ---AETVED---GTRTK------GWFSSVFQSIAGGNSVIERSDLQPALKALKDRLMTKN 316
Query: 351 VA--------------------------------AMEEALVRILTPRRSIDILRDVHAAK 378
VA AME ALVRILTP RSID+LRDVHAAK
Sbjct: 317 VAEEIAEKLCESVAASLEGKKQGSFTSTASTVQAAMEAALVRILTPSRSIDVLRDVHAAK 376
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
+ +PYV+VFVGVNGVGKSTNLAKVAYWLLQH ++V +AACDTFRSGAVEQLRTHARRLQ
Sbjct: 377 DSGRPYVIVFVGVNGVGKSTNLAKVAYWLLQHDLTVTLAACDTFRSGAVEQLRTHARRLQ 436
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+P+FEKGY++DPA+VAK+AI+EA R+ SDVVLVDTAGRMQDNEPLMRALSKLI +N+PDL
Sbjct: 437 IPVFEKGYQRDPAVVAKQAIEEAARSRSDVVLVDTAGRMQDNEPLMRALSKLIAVNSPDL 496
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
VLFVGEALVGNDAVDQL++F+QKLADLS +LIDGILL+KFDT+DDKVGAALSMVY
Sbjct: 497 VLFVGEALVGNDAVDQLTQFHQKLADLSPVHVEKRLIDGILLSKFDTVDDKVGAALSMVY 556
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VSGAPVMFVGCGQSYTDLKKLNVKSIV TLLK
Sbjct: 557 VSGAPVMFVGCGQSYTDLKKLNVKSIVNTLLK 588
>gi|414864259|tpg|DAA42816.1| TPA: hypothetical protein ZEAMMB73_088569 [Zea mays]
Length = 516
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 327/526 (62%), Positives = 371/526 (70%), Gaps = 60/526 (11%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEERSADASFSQDN----YA 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
LKWTFHN+LGLVFVAVYQ+ILHLLYVDDLLA +++ FS+IYDPKRT Y DF ++FRQL +
Sbjct: 57 LKWTFHNDLGLVFVAVYQKILHLLYVDDLLAAVRKEFSQIYDPKRTSYDDFGDIFRQLHR 116
Query: 119 EAEARAEELKKSKQV--TKPMNNL-KKQGGQLQKGGFERGSNRSGGGS-ANDDGDSD--- 171
EAEAR EE+KKSKQ ++P L +K+ G +GG RG + GGS A DD D D
Sbjct: 117 EAEARTEEMKKSKQALSSRPQPALTQKKPGPKGRGGDSRGGAANKGGSGAKDDSDGDGYG 176
Query: 172 NMRGRKLENG----HSNVGNVEIEESRVTGVANGKENTS-SNIGAFDVSKLQKLR-NKGG 225
N R L NG N E T V GKEN + + GAFDVSKLQKLR NK
Sbjct: 177 NQDHRTLANGAFKGQENGVRKENSSHGRTVVVKGKENGAPKDEGAFDVSKLQKLRANKKN 236
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNI-EVEAADHGESM 284
TD K + PD KKK K++RVWDD P KLDFTDPA G + + A GESM
Sbjct: 237 GATDNGTKKLTKPDIKKK-GKQDRVWDDKPSNKKLDFTDPADERGDEVADNVAVIEGESM 295
Query: 285 MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKD 344
MDK+E SSDSE EE E+ KK GWFSSMFQSI+G L+K+DL+PALKALKD
Sbjct: 296 MDKDEDLSSDSEDEEVED-------GPKKKGWFSSMFQSISGNNVLEKSDLQPALKALKD 348
Query: 345 RLMTKNVA--------------------------------AMEEALVRILTPRRSIDILR 372
RLM KNVA AME+AL+RILTPRRSIDILR
Sbjct: 349 RLMAKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEDALLRILTPRRSIDILR 408
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
DVHAAKE+ +PYV+VFVGVNGVGKSTNLAKVAYWLLQH +SV +AACDTFRSGAVEQLRT
Sbjct: 409 DVHAAKERGRPYVIVFVGVNGVGKSTNLAKVAYWLLQHNLSVTLAACDTFRSGAVEQLRT 468
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 478
HARRLQ+PIFEKGYEKDPA+VA+EAIQEATRN SDVVLVDTAGRMQ
Sbjct: 469 HARRLQIPIFEKGYEKDPAVVAREAIQEATRNKSDVVLVDTAGRMQ 514
>gi|449520750|ref|XP_004167396.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog, partial [Cucumis sativus]
Length = 356
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 297/356 (83%), Positives = 313/356 (87%), Gaps = 33/356 (9%)
Query: 267 GGNG-SNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIA 325
G NG +NI+V AAD G+SMMDKEEVFSSDSE EEDEE K ++PDAKK GWFSSMFQSI+
Sbjct: 1 GENGDNNIDVLAADQGQSMMDKEEVFSSDSEDEEDEEGDKGSEPDAKKKGWFSSMFQSIS 60
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
GKA+LDKADLEPALKALKDRLMTKNVA A
Sbjct: 61 GKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAA 120
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
MEEALVRILTPRRSIDILRDVHAAKEQ+KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS
Sbjct: 121 MEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 180
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
VMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEAIQEA+RNGSDVVLVDT
Sbjct: 181 VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDT 240
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGRMQDNEPLMRALSKLI LN+PDLVLFVGEALVGNDAVDQLSKFNQKLADLS+SP P+L
Sbjct: 241 AGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRL 300
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDGILLTKFDTIDDKVGAALSMVY+SGAPVMFVGCGQSYTDLKKLNVKSIVKTL+K
Sbjct: 301 IDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK 356
>gi|307108633|gb|EFN56873.1| hypothetical protein CHLNCDRAFT_21935 [Chlorella variabilis]
Length = 629
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 327/649 (50%), Positives = 401/649 (61%), Gaps = 80/649 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYD-SAGAAYTL 59
ML+ + IFT+GG +LW +G LKG PI+TLIR+CLLEER+G +SF Y +G Y L
Sbjct: 1 MLDHVCIFTKGGSLLWVLSFVG--LKGDPINTLIRACLLEERAGQSSFEYIIPSGGTYAL 58
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKE 119
KW+ +N LGLVFVAVYQ+ L LLYVD+LL M ++F+ Y P +Y DFD F++L K+
Sbjct: 59 KWSLNNGLGLVFVAVYQKALKLLYVDELLERMNRAFAPRYKPGCFEYPDFDATFQRLLKD 118
Query: 120 AEARAEELKK-SKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR---- 174
E +AE ++ S Q P G Q R S GGS+ + GDSD
Sbjct: 119 CEEKAEAARRPSTQQLAPAQVGAAAGQQ------RRASGAKTGGSSQE-GDSDGTADGGE 171
Query: 175 --------------GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFD-VSKLQK 219
G ++ + + E E+ G ANG S + D + KL K
Sbjct: 172 AAAAAAAPASGSDAGPAGDSAGQSSDDAEGED----GAANGA--ASEFVPNLDKLKKLGK 225
Query: 220 LRNKGGKKTDT---VVSKGSNPDPKKKITKKNRVWDDSP---PESKLDFTDPAGGNGSNI 273
GGK T V + P K K+ RVW D+ E LDFT+ G G
Sbjct: 226 RAGPGGKVTRHHADRVEEPKKKAPAGKKGKQARVWGDAANGKEEGPLDFTE--GEPGEAQ 283
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKA 333
EV A + S++D EE + D E +EE KK G SS ++I L +
Sbjct: 284 EVAADLNQRSLIDVEEEVTYD---ELEEEEEAAAAGAPKKGGLLSSFVRTIGVNVALTRT 340
Query: 334 DLEPALKALKDRLMTKNVA--------------------------------AMEEALVRI 361
D+EPAL LK +LM +NVA A+EEAL RI
Sbjct: 341 DIEPALATLKKKLMERNVAEEIADKVTESVATSLEGRKLASFTRVSTAVQQAVEEALTRI 400
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
LTP+RSID+LR+V A + + +PY +VFVGVNGVGKSTNLAKVAYWLLQ+ V VM+AACDT
Sbjct: 401 LTPKRSIDVLREVKAVQAKGQPYTIVFVGVNGVGKSTNLAKVAYWLLQNGVKVMIAACDT 460
Query: 422 FRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
FRSGAVEQL+TH RLQVP++E+GYEKDPA VA EA + A R+G DV+LVDTAGRMQDNE
Sbjct: 461 FRSGAVEQLKTHCARLQVPLYERGYEKDPAKVAFEAAKAAQRSGIDVLLVDTAGRMQDNE 520
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ-LIDGILLT 540
PLMRALS LI LN PDLVLFVGEALVGNDAVDQL+KFNQ+LADL P + LIDGI+LT
Sbjct: 521 PLMRALSNLINLNQPDLVLFVGEALVGNDAVDQLTKFNQRLADLCPDPTQRHLIDGIVLT 580
Query: 541 KFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
KFDTIDDKVGAALSMVY SGAP+MFVGCGQ+Y DLKKL+VKS+VK+LLK
Sbjct: 581 KFDTIDDKVGAALSMVYTSGAPIMFVGCGQTYVDLKKLHVKSVVKSLLK 629
>gi|224142381|ref|XP_002324537.1| predicted protein [Populus trichocarpa]
gi|222865971|gb|EEF03102.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/312 (85%), Positives = 278/312 (89%), Gaps = 32/312 (10%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
DAKK GWFSSMFQSIAGKANL+KADLEPALKALKDRLMTKNVA
Sbjct: 1 DAKKKGWFSSMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEG 60
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
AMEEALVRILTPRRSIDILRDVHAA+EQRKPYVVVFVGVNGVGKS
Sbjct: 61 KKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAREQRKPYVVVFVGVNGVGKS 120
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 457
TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEA
Sbjct: 121 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEA 180
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI LNNPDLVLFVGEALVGNDAVDQLSK
Sbjct: 181 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNNPDLVLFVGEALVGNDAVDQLSK 240
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQKLADLS+SPNP+LIDGILLTKFDTIDDKVGAALSMVY+SG+PVMFVGCGQSYTDLKK
Sbjct: 241 FNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 300
Query: 578 LNVKSIVKTLLK 589
LNVK+I+KTLLK
Sbjct: 301 LNVKAIIKTLLK 312
>gi|147768335|emb|CAN66971.1| hypothetical protein VITISV_013670 [Vitis vinifera]
gi|297743653|emb|CBI36536.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/312 (85%), Positives = 275/312 (88%), Gaps = 32/312 (10%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
+ KK GWFS+MFQSIAGKANL+KADLEPALKALKDRLMTKNVA
Sbjct: 2 ETKKKGWFSAMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEG 61
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS
Sbjct: 62 KKLASFTRVSSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 121
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 457
TNLAKVAYWLLQH VSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPAIVAKEA
Sbjct: 122 TNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEA 181
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL+ LNNPDLVLFVGEALVGNDAVDQLSK
Sbjct: 182 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLVNLNNPDLVLFVGEALVGNDAVDQLSK 241
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQKLADLS+SP PQLIDGILLTKFDTIDDKVGAALSMVY+SGAPVMFVGCGQSYTDLKK
Sbjct: 242 FNQKLADLSTSPKPQLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKK 301
Query: 578 LNVKSIVKTLLK 589
LNVKSIVKTLLK
Sbjct: 302 LNVKSIVKTLLK 313
>gi|34581773|gb|AAQ76042.1| signal recognition particle receptor protein [Cucumis sativus]
Length = 313
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/312 (85%), Positives = 277/312 (88%), Gaps = 32/312 (10%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
DAKK GWFSSMFQSI+GKA+LDKADLEPALKALKDRLMTKNVA
Sbjct: 2 DAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEG 61
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
AMEEALVRILTPRRSIDILRDVHAAKEQ+KPYVVVFVGVNGVGKS
Sbjct: 62 KKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKS 121
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 457
TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEA
Sbjct: 122 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEA 181
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
IQEA+RNGSDVVLVDTAGRMQDNEPLMRALSKLI LN+PDLVLFVGEALVGNDAVDQLSK
Sbjct: 182 IQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLSK 241
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQKLADLS+SP P+LIDGILLTKFDTIDDKVGAALSMVY+SGAPVMFVGCGQSYTDLKK
Sbjct: 242 FNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKK 301
Query: 578 LNVKSIVKTLLK 589
LNVKSIVKTL+K
Sbjct: 302 LNVKSIVKTLIK 313
>gi|302835766|ref|XP_002949444.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f.
nagariensis]
gi|300265271|gb|EFJ49463.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f.
nagariensis]
Length = 642
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 304/660 (46%), Positives = 391/660 (59%), Gaps = 89/660 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDT---LIRSCLLEERSGLASFNY-DSAGAA 56
ML+ + F RGG +LW + L+ SP+D LIR CLLEER G +F Y +GAA
Sbjct: 1 MLDFVAAFERGGAVLWMLQF--TTLRHSPLDAINALIRGCLLEERLGENTFTYVPKSGAA 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQL 116
LKWTFHN LGLVFVAVYQ+ L LLYVD+LL +K F +Y P + DY FD++F +L
Sbjct: 59 QALKWTFHNGLGLVFVAVYQKTLSLLYVDELLTAVKDEFVGVYKPGQRDYKGFDDVFNRL 118
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
+EAE RAE K+ + + KQG + + GG + GS G A+DD + R
Sbjct: 119 LREAETRAEVSKRQPAMRTAAVVMAKQGKK-ESGGTKSGSKTGGDADADDDTAAKGNRRG 177
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQK-----LRNKGGKKTDTV 231
G S+ + + E+ +G +G + AFDVSKL K R G+
Sbjct: 178 NGAGGQSSEVSADGEDGDTSGAEDG-------VRAFDVSKLPKGIASRGRGVRGRPGAAA 230
Query: 232 VSKGSNPDPKKK----ITKKNRVWDDSPPESKLDFTDPAGGNGSNIE-VEAADHGESMMD 286
S + KKK KK R W+ P K G N I+ E D + D
Sbjct: 231 TSSKAEASSKKKEDAAPKKKARNWNTLFPSGK-------GDNPDRIDYTEEGDGPPTASD 283
Query: 287 KEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
++ V + + + EDE G + SS+ ++ G + L +AD+EPAL +K +L
Sbjct: 284 RDLVSGTSASATEDEGAGAQRAGRGLLASFVSSLKMNVVGTSALSRADVEPALADMKRKL 343
Query: 347 MTKNVA--------------------------------AMEEALVRILTPRRSIDILRDV 374
M +NVA A EEAL IL +R++D+L D+
Sbjct: 344 MERNVAEEIASQVCDSVGRRLEGQRLAGFTGVVTFVRSAFEEALSGILN-KRAVDVLLDI 402
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
++ + KPYV+VF GVNGVGKSTNLAK+AYWL H + VM+AACDTFR+GAVEQL+TH
Sbjct: 403 KKSQARGKPYVIVFCGVNGVGKSTNLAKIAYWLGGHGIKVMIAACDTFRAGAVEQLKTHC 462
Query: 435 RRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
RL+VP++E+GYEKDPA VA EAI++A R+G VVLVDTAGRMQDN+PLMRALS LI +N
Sbjct: 463 ARLRVPLYERGYEKDPAKVAYEAIRQAERDGQHVVLVDTAGRMQDNQPLMRALSNLIAVN 522
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLS-------------------------SSP 529
NP+LVLFVGEALVGNDAVDQL+KFN+ L+DL+ +
Sbjct: 523 NPNLVLFVGEALVGNDAVDQLTKFNKALSDLAPTAAAAAASGATGVSGRGNDDGSALTRR 582
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ +IDGI+LTKFDTIDDKVGAALSMVY SGAPVMFVGCGQ+Y DLKKLNVKS+VK+LLK
Sbjct: 583 HGGVIDGIVLTKFDTIDDKVGAALSMVYTSGAPVMFVGCGQTYVDLKKLNVKSVVKSLLK 642
>gi|159467803|ref|XP_001692081.1| alpha subunit of the SRP receptor [Chlamydomonas reinhardtii]
gi|158278808|gb|EDP04571.1| alpha subunit of the SRP receptor [Chlamydomonas reinhardtii]
Length = 687
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 319/704 (45%), Positives = 405/704 (57%), Gaps = 132/704 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSP---IDTLIRSCLLEERSGLASFNYD-SAGAA 56
ML+ +L F RGG ILW + +L+ +P I+ LIR CLLEER G +F ++ +GA
Sbjct: 1 MLDYVLAFERGGAILWALQF--TSLRHNPLEAINALIRGCLLEERLGDNTFTFNPKSGAP 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQL 116
TLKWTFHN LGLVFVAVYQ+ L LLYVD+LL+ +K+ F +Y P + Y FDE F +L
Sbjct: 59 QTLKWTFHNGLGLVFVAVYQKTLSLLYVDELLSNVKEEFVNVYKPGQRGYRQFDETFNRL 118
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
++AE+RA+ KK + KQG Q G + G A+ D D+ R +
Sbjct: 119 LRDAESRADAAKKQPVMRSGPPANAKQGTGSQAVGAQAKKGTQAGKDASGDDDAGAAR-K 177
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQK--------------LRN 222
NG VGN G A G++ N+ AFDVSKL K +
Sbjct: 178 GAANG--TVGNTS------DGSAGGEDGDEDNVRAFDVSKLPKGMAGRGTRGVRGRPVPG 229
Query: 223 KGGKK-TDTVVSKGSNPDPKKKITKKNRVWD--------DSPPESKLDFTDPAGGNG--- 270
G K +DT K P K KK R W+ D+P +++D+T+ G G
Sbjct: 230 AGSAKVSDTGKKKEEAPAAK---VKKARNWNTMLSGGKGDTP--TRIDYTEDGDGPGTSD 284
Query: 271 ---------SNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDA---------- 311
S E E G S MD EE DSE E+DE++
Sbjct: 285 MDLISGASASATEDEGRGVGVSRMDVEEDEYDDSEFEDDEDLNNGAGGRGGSGAGASGSA 344
Query: 312 ----KKTGWFSSMFQSIA----GKANLDKADLEPALKALKDRLMTKNVA----------- 352
KK G +S S+A GKA L +AD+EPAL +K +LM +NVA
Sbjct: 345 AAAPKKQGLLASFVSSLAMNVVGKAALSRADVEPALAEMKRKLMERNVAEEIAAQVCDSV 404
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 391
A EEAL IL +RS+D+L D+ ++ + KPYV+VF GV
Sbjct: 405 GRNLEGQRLAGFTGVAAFVRNAFEEALSGILN-KRSVDVLLDIKKSQARGKPYVIVFCGV 463
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPA 451
NGVGKSTNLAK+AYWL H + VM+AACDTFR+GAVEQL+TH RL+VP++E+GYEKDPA
Sbjct: 464 NGVGKSTNLAKIAYWLGSHNIKVMIAACDTFRAGAVEQLKTHCARLRVPLYERGYEKDPA 523
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VA EA+++A ++G VVLVDTAGRMQDN+PLMRALS LI LNNP+LVLFVGEALVGNDA
Sbjct: 524 KVAYEAVRQAEKDGVHVVLVDTAGRMQDNQPLMRALSTLISLNNPNLVLFVGEALVGNDA 583
Query: 512 VDQLSKFNQKLADLSSSP--------------------------NPQLIDGILLTKFDTI 545
VDQL+KFN+ L+DL+ + + +IDGI+LTKFDTI
Sbjct: 584 VDQLTKFNKSLSDLAPTTAGAGGPGEGTGAVGRGQADGSALTRRHGGVIDGIVLTKFDTI 643
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D+KVGAALSMVY SGAPVMFVGCGQ+Y DLKKLNVKS+VK+LLK
Sbjct: 644 DEKVGAALSMVYTSGAPVMFVGCGQTYVDLKKLNVKSVVKSLLK 687
>gi|356498770|ref|XP_003518222.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
receptor subunit alpha homolog [Glycine max]
Length = 387
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/299 (81%), Positives = 257/299 (85%), Gaps = 36/299 (12%)
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVA----------------------------AME 355
IAGKANL+K+DLEPALKALKDRLMTKNVA AME
Sbjct: 92 IAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCEXLEGKKLASFTRISSTVHTAME 151
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
EALV ILTPRRSIDILRDV+AAKEQRKPYVVVFVGV GKSTNLAKVAYWLLQH +SVM
Sbjct: 152 EALVPILTPRRSIDILRDVYAAKEQRKPYVVVFVGV---GKSTNLAKVAYWLLQHNISVM 208
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
MAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPAIVAKEAIQEA+RNGSDVVLVDTAG
Sbjct: 209 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAG 268
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
MQDNEPLMRALSKL+YLNNP+L+LFVGEALVGNDAVDQL+KFNQKLADLS+SP P+LID
Sbjct: 269 CMQDNEPLMRALSKLVYLNNPNLILFVGEALVGNDAVDQLAKFNQKLADLSTSPTPRLID 328
Query: 536 GILLTKFDTIDDKV-----GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
GILLTKFDTIDDKV GAALSMVYVSGAPVMFVGCGQSYTDLKKLN KSI KTLLK
Sbjct: 329 GILLTKFDTIDDKVCFVVAGAALSMVYVSGAPVMFVGCGQSYTDLKKLNAKSIAKTLLK 387
>gi|449530510|ref|XP_004172238.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
receptor subunit alpha homolog, partial [Cucumis
sativus]
Length = 291
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/296 (75%), Positives = 250/296 (84%), Gaps = 6/296 (2%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKELGNAL+GSPIDTLIRSCLLEERSG AS+NYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WTFHNELGLVFVAVYQRILHLLYVDDLLAM+KQ FSEIYDPKR Y DFDE FRQLR EA
Sbjct: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
EAR EL K+KQV KP+NN +KQ GQ QK GF G N+ DDGD++ +G KLEN
Sbjct: 121 EARTNELXKTKQVGKPLNNARKQ-GQDQKTGF--GENKKSNSGLADDGDAERTKGHKLEN 177
Query: 181 GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP 240
G+SN GN + ES++T V NGKENTSSN+GAFDV+KLQKLR+KGGKKTD V +KGS +P
Sbjct: 178 GYSN-GN-HVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKEEP 235
Query: 241 KKKITKKNRVWDDSPPESKLDFTDPAGGNG-SNIEVEAADHGESMMDKEEVFSSDS 295
KKK+TKKNRVWD+ P E+KLDFTDP G NG +NI+V AAD G+SMMDKEEVFSSDS
Sbjct: 236 KKKVTKKNRVWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEEVFSSDS 291
>gi|170038031|ref|XP_001846857.1| signal recognition particle receptor subunit alpha [Culex
quinquefasciatus]
gi|167881443|gb|EDS44826.1| signal recognition particle receptor subunit alpha [Culex
quinquefasciatus]
Length = 625
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 269/659 (40%), Positives = 365/659 (55%), Gaps = 104/659 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IFT+GG++LW C N L P++ LIRS +L+ERSG+ YD G +L+
Sbjct: 1 MLDLFTIFTKGGIVLW-CFRGTNQLFAPPVNALIRSVILQERSGV----YDHDG--LSLQ 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD----PKRTDYSDFDEMFRQL 116
+ NE LVFV +Q+IL L Y+D L+ + F + Y + +Y++F+ F+
Sbjct: 54 YKLDNEFELVFVVAFQKILQLSYIDKFLSDVHLEFRDKYKNDLRAENRNYTNFE--FQAD 111
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
A AE+ K KQ T P + K R GG S +
Sbjct: 112 FSRILAAAEKWGK-KQATLPKQMRSYEDSHKSKKTVASMIERRGGEEKPATKKSVKIVEA 170
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGS 236
K E E+ + VANG I ++KL + V + S
Sbjct: 171 KRE-----------EQENIAPVANGSGGNEDLIMENRKKMMEKL-SGKKGGGGKVDKQKS 218
Query: 237 NPDPKKKITKKNRVWD---------------DSPPESKLDFTDPAGGNGS------NIEV 275
P +K K+ RVW+ D P + K DF+ GS ++EV
Sbjct: 219 PKSPPQKSGKQMRVWELDGKSKDLPNLDRCKDRPEDIKSDFSSTDKMIGSMKGGIQDLEV 278
Query: 276 EAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADL 335
E+ D+ S ++++ + + P AKK+G S+F+ + G NL + D+
Sbjct: 279 ES-DNDYSEEEEDDDDDEATVT-----------PAAKKSGGMFSLFKGLVGSKNLSREDM 326
Query: 336 EPALKALKDRLMTKNVAA--------------------------------MEEALVRILT 363
+PAL LKD L++KNVA + EALV+IL+
Sbjct: 327 QPALDKLKDHLISKNVATDISHKLCESVAVKLEGKVLGTFDTIAATVKNTLTEALVQILS 386
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
P+R +DILRD AK+ ++PYV+ F GVNGVGKSTNLAK+ +WL+++ +V++AACDTFR
Sbjct: 387 PKRRVDILRDCMEAKKNKRPYVMSFCGVNGVGKSTNLAKICFWLIENNFNVLIAACDTFR 446
Query: 424 SGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A G D+VL
Sbjct: 447 AGAVEQLRTHMRHLNALHPPEKHGGRSMVQLYEKGYGKDAAGIAMEAIRHANDTGVDIVL 506
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD SS+ N
Sbjct: 507 IDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSSNEN 566
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLKKLN K++V L+K
Sbjct: 567 PHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKKLNAKAVVHALMK 625
>gi|326523427|dbj|BAJ88754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/237 (91%), Positives = 228/237 (96%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
AMEEAL+RILTPRRSIDILRDV AAKE+ KPYVVVFVGVNGVGKSTNLAKVAYWLLQH +
Sbjct: 32 AMEEALLRILTPRRSIDILRDVQAAKERGKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNL 91
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVD
Sbjct: 92 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 151
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLMRALSKLI LN PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +
Sbjct: 152 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTAR 211
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LIDGILLTKFDTIDDKVGAALSMVY+SG+PVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 212 LIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 268
>gi|18256022|gb|AAH21839.1| Signal recognition particle receptor ('docking protein') [Mus
musculus]
Length = 636
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 263/664 (39%), Positives = 369/664 (55%), Gaps = 104/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSASSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K E+ N
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTK---EKAKN------ 166
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+ RG K E + + + +G++ G EN + K ++ K
Sbjct: 167 -------NKKRGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQK 219
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------N 272
GK D + PK+K K RVW+ +K LD++ P NG+ N
Sbjct: 220 HGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDIN 278
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANL 330
+ + G + D D S +DE ++ KP A K G M + + G +L
Sbjct: 279 L-IRGTGPGGQLQD------LDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSL 331
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 332 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 391
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 392 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 451
Query: 419 CDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 452 CDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 511
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 512 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 571
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 572 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 631
Query: 586 TLLK 589
L+K
Sbjct: 632 ALMK 635
>gi|27229036|ref|NP_080406.1| signal recognition particle receptor subunit alpha [Mus musculus]
gi|47117310|sp|Q9DBG7.1|SRPR_MOUSE RecName: Full=Signal recognition particle receptor subunit alpha;
Short=SR-alpha; AltName: Full=Docking protein alpha;
Short=DP-alpha
gi|12836553|dbj|BAB23706.1| unnamed protein product [Mus musculus]
gi|26332409|dbj|BAC29922.1| unnamed protein product [Mus musculus]
Length = 636
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 263/664 (39%), Positives = 369/664 (55%), Gaps = 104/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K E+ N
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTK---EKAKN------ 166
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+ RG K E + + + +G++ G EN + K ++ K
Sbjct: 167 -------NKKRGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQK 219
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------N 272
GK D + PK+K K RVW+ +K LD++ P NG+ N
Sbjct: 220 HGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDIN 278
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANL 330
+ + G + D D S +DE ++ KP A K G M + + G +L
Sbjct: 279 L-IRGTGPGGQLQD------LDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSL 331
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 332 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 391
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 392 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 451
Query: 419 CDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 452 CDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 511
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 512 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 571
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 572 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 631
Query: 586 TLLK 589
L+K
Sbjct: 632 ALMK 635
>gi|440791588|gb|ELR12826.1| signal recognition particledocking protein [Acanthamoeba
castellanii str. Neff]
Length = 639
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 263/650 (40%), Positives = 387/650 (59%), Gaps = 74/650 (11%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLA-SFNYDSAGAAYTL 59
ML+++ +FT+GG++LW+ E L G+PID LI++ LLEER G SF +Y +
Sbjct: 1 MLDKIAVFTKGGIVLWS--ESFTNLVGNPIDDLIQTVLLEERKGAEKSF----IAGSYKI 54
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSD------FDEM 112
+WTFHN+L LVFVAVYQ+IL LLY++++L ++K+ F ++ D R + FD+
Sbjct: 55 EWTFHNDLELVFVAVYQKILQLLYIEEMLELVKKKFCSLFGDAVRAKTINLSGPLAFDKP 114
Query: 113 FRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQK-GGFERGSNRSGGGSANDDGDSD 171
F ++R + E +A+E K+++ + + K+ ++ ++ S D+G++D
Sbjct: 115 FERIRLQCETKAQEAKQARGAQRRFEDTKRGKEVVESTKAKGEKKEKASKKSKGDEGEAD 174
Query: 172 N-MRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDT 230
+ M ++E + G + S A+ + + I A + L+K G+
Sbjct: 175 DKMVEEEVEQTGDDEGTGAEDASATGESASAAADPEATIMANRAALLKKKAVGRGRGAPG 234
Query: 231 VVSKGSNP-----------DPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAAD 279
+ KG P D KKK K R W++ P K+D+++ +G E EA+D
Sbjct: 235 PMRKGPKPKVPAAAPPAAADTKKK-GKVARKWEEDGP-GKIDYSEKSGQQ----EFEASD 288
Query: 280 -HGESM----MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKAN--LDK 332
+G++ D + F + S DEE ++ K+G S+ +G N L +
Sbjct: 289 KYGDASEPINADDWDAFFKNKRSPVDEEDDDEDEGTQTKSGSSWSIGSIFSGLTNRVLKR 348
Query: 333 ADLEPALKALKDRLMTKNVAA--------------------------------MEEALVR 360
+L P L ++ L+ KNVA+ +EEAL R
Sbjct: 349 EELMPVLGKFRETLIAKNVASEIADELVESVCTSLEGKTMSSFSRVRSAVRTTLEEALTR 408
Query: 361 ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACD 420
ILTP+ ++IL++V K++ +PY + FVGVNGVGKSTNL+KV +LLQ+K++VM+ ACD
Sbjct: 409 ILTPKSRLEILQEVARVKKEGRPYTIAFVGVNGVGKSTNLSKVCNYLLQNKLNVMITACD 468
Query: 421 TFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDN 480
TFRSGAVEQLR H+R L VP+FE+GYEKDPA+VA+ I EA + G DVVL+DTAGRMQDN
Sbjct: 469 TFRSGAVEQLRVHSRNLNVPLFERGYEKDPALVAQHGIYEAKQKGMDVVLIDTAGRMQDN 528
Query: 481 EPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL--SSSPNPQLIDGIL 538
LM+AL+KL+Y NNPDL+LFVGEALVGN+AVDQL FN L+D S+ P+ IDGI+
Sbjct: 529 RRLMQALAKLVYTNNPDLILFVGEALVGNEAVDQLRGFNLALSDFVPSNVAQPRQIDGII 588
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
LTKFDTIDDKVGAA+SMVY +G P++FVG GQ Y D+K++NV ++++ LL
Sbjct: 589 LTKFDTIDDKVGAAISMVYTTGQPIVFVGTGQKYGDIKRMNVSTVIRALL 638
>gi|328766891|gb|EGF76943.1| hypothetical protein BATDEDRAFT_14566 [Batrachochytrium
dendrobatidis JAM81]
Length = 634
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 270/680 (39%), Positives = 367/680 (53%), Gaps = 137/680 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELG---NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY 57
M++Q+ I T+GG +LWT + N L ++ LI + LLEER+G ++ D +
Sbjct: 1 MIDQITILTQGGAVLWTRRLFSTQSNTL--DLVNALISNVLLEERAGKDAYLVD----PF 54
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSE-----IYDPKRTD-YSDFDE 111
LKWTF NE+GLVFVAV+Q++L L Y+D+LL +K +F I D D Y++FD+
Sbjct: 55 LLKWTFANEVGLVFVAVHQKVLSLPYIDELLQAIKSTFCSRFKNIIGDISHIDEYAEFDD 114
Query: 112 MFRQLRKEAEARAEELK---KSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDG 168
+F + E +A+E K K+ K N L +G Q +K
Sbjct: 115 VFDTILDAVEEKAKEAKVPRSFKESRKYTNTL--EGSQQKKS------------------ 154
Query: 169 DSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKG---- 224
++ + ES A+G T + + KL+KL +G
Sbjct: 155 ------------------DLAVSESVSLDAASGDPTTQTKADELAL-KLEKLAKRGVSSR 195
Query: 225 ---GKKTDTVVSKGSNPDPKKKITKKNRVWDDS------PPESKLDFTDPAGGN------ 269
KK+ +VS+ ++P KK K+ R WD + KLDF+D +
Sbjct: 196 KNTSKKSKPLVSETASPSLAKK-EKQMRAWDAAGGSMSVDSNQKLDFSDSKQDSETVLLN 254
Query: 270 --GSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKP-------DAKKTGWFSSM 320
G ++ +AD +D + + SE+E D+ + + + G S
Sbjct: 255 LVGHSLGTRSADGSYEALDIDRPAETASENESDDAKDQDSSTAHLTISKSSTSGGDLFSF 314
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------------- 353
F L + DLEPAL +K+ L+ KNVAA
Sbjct: 315 FSKWVSARTLTEVDLEPALIKIKEHLINKNVAADIASLLCDSVKSGLIGKKTGPFKALNT 374
Query: 354 -----MEEALVRILTPRRSIDILRDVHAAKEQR------------KPYVVVFVGVNGVGK 396
ME AL RILTP S D+LR+++A + +PY VFVGVNGVGK
Sbjct: 375 TIKELMEIALSRILTPSTSTDVLREINAVNNKSHSGNRLSSSHVGRPYTFVFVGVNGVGK 434
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------VPIFEKGYEKD 449
STNL+K+ +WLLQ+K V++AACDTFRSGAVEQLR H + L+ V +F++GY KD
Sbjct: 435 STNLSKICFWLLQNKKRVLIAACDTFRSGAVEQLRVHVKNLKALEKGAVVDLFDRGYGKD 494
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
PA +AKEAI AT D+VL+DTAGRMQDNEPLMRAL+KLI NNPD +LFVGEALVGN
Sbjct: 495 PAAIAKEAIAYATLERYDIVLIDTAGRMQDNEPLMRALAKLISTNNPDKILFVGEALVGN 554
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
AVDQL+KFNQ D S P+ IDG++LTKFDTIDDKVGAALSM Y +G P++FVG G
Sbjct: 555 GAVDQLTKFNQAFRDFSGMREPRQIDGMILTKFDTIDDKVGAALSMTYATGKPILFVGTG 614
Query: 570 QSYTDLKKLNVKSIVKTLLK 589
Q+YTDL+KLNV+S+V +LLK
Sbjct: 615 QTYTDLRKLNVRSVVSSLLK 634
>gi|156398259|ref|XP_001638106.1| predicted protein [Nematostella vectensis]
gi|156225224|gb|EDO46043.1| predicted protein [Nematostella vectensis]
Length = 625
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 258/653 (39%), Positives = 361/653 (55%), Gaps = 93/653 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW +E + P++ LI+ +L+ER G +F +DS TLK
Sbjct: 1 MLDLFTIFSKGGIVLWCFQESYQSFT-LPVNELIKGVILQERGGSNAFTHDS----LTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD----YSDFDEMFRQL 116
+ NE LVFV +Q+IL L Y+D LL ++ F + Y + +F + F ++
Sbjct: 56 YKLDNEFELVFVVAFQKILQLSYIDKLLNDIQLEFRDKYKDELNQGIIRNFEFSDEFNRI 115
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
K+AE ++ K + + KK + ++ ++G G + +
Sbjct: 116 LKDAENISKIEAKIPKKMRTFEESKKSQKTVASMIIDKNEEKTGKGKSKKEQKE------ 169
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV-VSKG 235
+ ++E+ G + +E N + + +R GK SKG
Sbjct: 170 ----------GIFVQETAGNGGLSAEEVIQRN-------REKLMRKMAGKPVKAAATSKG 212
Query: 236 SNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEV----- 290
S P+++ K+ R W S +++ D +G NGS+ + D E ++ + +
Sbjct: 213 SAAQPRER-KKEARKWAMSGDGKEVETLDFSGTNGSDHQANGKDDEEDLIKMKPMIGSMK 271
Query: 291 -------FSSDSESEEDEEVG--KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKA 341
+ SDSE E +E+ + +P S F+ +AG++ L K + P L+
Sbjct: 272 GNVKPLEYESDSEVELADEMTEPQPGQPSQNTNQSVFSFFKGLAGQSTLAKEQISPVLEK 331
Query: 342 LKDRLMTKNVAA--------------------------------MEEALVRILTPRRSID 369
+K+ L +KNVAA +EE+L++IL+P+R +D
Sbjct: 332 MKEHLTSKNVAADISEKLCDSVATKLEGKVIGTFSGIASTVKSSLEESLIQILSPKRRVD 391
Query: 370 ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
ILRD K + KPYVV F GVNGVGKSTNLAKV +WLL++ VM+AACDTFR+GAVEQ
Sbjct: 392 ILRDAMENKRKGKPYVVTFCGVNGVGKSTNLAKVCFWLLENNFRVMIAACDTFRAGAVEQ 451
Query: 430 LRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 476
LRTH R L V ++EKGY KD A +A +AI A DVVLVDTAGR
Sbjct: 452 LRTHVRHLNALHPPAHANGPPSVLLYEKGYGKDAASIAMDAINFAREQRVDVVLVDTAGR 511
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDG 536
MQDNEPLMRALSKLI LN+PDLVLFVGEALVGN+AVDQL KFNQ LAD SS P+LIDG
Sbjct: 512 MQDNEPLMRALSKLIKLNDPDLVLFVGEALVGNEAVDQLKKFNQALADHSSQDRPRLIDG 571
Query: 537 ILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ILLTKFDTIDD+VGAA+SM Y +G P++FVG GQ+Y DLK LNVK++V LLK
Sbjct: 572 ILLTKFDTIDDQVGAAISMTYTTGQPIVFVGTGQTYKDLKSLNVKAVVHALLK 624
>gi|24641198|ref|NP_524887.2| GTP-binding protein [Drosophila melanogaster]
gi|47117334|sp|Q9U5L1.2|SRPR_DROME RecName: Full=Signal recognition particle receptor subunit alpha
homolog; Short=DP-alpha; Short=Docking protein alpha;
Short=SR-alpha; AltName: Full=GTP-binding protein
gi|22832080|gb|AAF48002.2| GTP-binding protein [Drosophila melanogaster]
gi|201065707|gb|ACH92263.1| FI05231p [Drosophila melanogaster]
Length = 614
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 262/645 (40%), Positives = 362/645 (56%), Gaps = 87/645 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW GN+ S I++LIR +LEER+ A + Y+ A ++
Sbjct: 1 MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLA--VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSDFDEMFRQLRKE 119
+ NEL LV+ A++Q+++ L Y+D LA M+ +F E Y D + D DFD +R++
Sbjct: 57 FKLDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSA 116
Query: 120 AEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLE 179
AE + + K+ + + N +K S ++ DD R
Sbjct: 117 AEEASAKQVKAPKTMRSYNESQK-------------SKKTVASMIQDDKKPVEKR----- 158
Query: 180 NGHSNVGNVEIEESRVTGVANGKEN-TSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNP 238
V I+E+ + T S + + K +KLR K T S
Sbjct: 159 --------VNIQEAPPPSKSQPSSPPTGSPMDKIIMEKRRKLREKL-TPTKKTSPSDSKS 209
Query: 239 DPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESMMDKEEVFSS 293
+K KK RVWD +S + LD + P NI E + ++ +V S
Sbjct: 210 SKPEKAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESE 269
Query: 294 DSESEEDE----EVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTK 349
D ED E + + K G S F+ I G + ADL+PAL+ ++D L++K
Sbjct: 270 DEADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISK 329
Query: 350 NVA--------------------------------AMEEALVRILTPRRSIDILRDVHAA 377
NVA A+ E+LVRIL+P+R IDI+RD +
Sbjct: 330 NVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALES 389
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K +PY ++F GVNGVGKSTNLAK+ +WL+++ +V++AACDTFR+GAVEQLRTH R L
Sbjct: 390 KRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHL 449
Query: 438 Q-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
V ++EKGY KD A +A EAI+ A DVVLVDTAGRMQDNEPLM
Sbjct: 450 NALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLM 509
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDT 544
R+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD SS+ NP +IDGI+LTKFDT
Sbjct: 510 RSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDT 569
Query: 545 IDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 570 IDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 614
>gi|332018340|gb|EGI58945.1| Signal recognition particle receptor subunit alpha-like protein
[Acromyrmex echinatior]
Length = 613
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/650 (40%), Positives = 365/650 (56%), Gaps = 98/650 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ER+G SF +DS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERTGNHSFEHDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEM-FRQLRKE 119
+ NE LVFV YQ+IL L YVD L + F + + + + S F F +
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNDIHLEFRDRFKNELENSSWFTNFEFEHAYRM 115
Query: 120 AEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKL 178
RAE +S+ ++ K M + + S ++ D D+ + K+
Sbjct: 116 VLERAEHWSRSQAKIPKQMRTFDE----------SQKSKKTVASMIERKNDKDDKKPAKI 165
Query: 179 EN-------GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV 231
++ H N E++E T +AN +++ + G+K
Sbjct: 166 QDVPKQELPKHQAEHNGELDEE--TLIAN---------------RMKLAQKMAGQKKKA- 207
Query: 232 VSKGSNPDPKKKITKKNRVWD---DSPPESKLDFT-DPAGGNGSNIEVEAADHGE---SM 284
K +P P+K KK R+W+ + + L+ T D N + A G+ S+
Sbjct: 208 -DKQKSPKPEKA-GKKPRIWELGGTTKDLATLERTKDKPEENDDYVAANTALVGQMKGSI 265
Query: 285 MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKD 344
D E V S +S + EE+ + + KKT FS MF+S+ G +L + D+ P L+ LKD
Sbjct: 266 RDLE-VNSESEDSSDQEEIEQSKQQVQKKTSMFS-MFKSLVGSKSLKQEDMLPVLEKLKD 323
Query: 345 RLMTKNVAA--------------------------------MEEALVRILTPRRSIDILR 372
L+TKNVAA + +ALV+IL+P+R IDILR
Sbjct: 324 HLITKNVAADIAQKLCDSVGTKLEGKILGTFDSVANTVKATLTDALVQILSPKRRIDILR 383
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
D AK +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRT
Sbjct: 384 DALEAKNSNRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRT 443
Query: 433 HARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQD 479
H R L V ++EKGY KD A +A EAI+ A + DVVLVDTAGRMQD
Sbjct: 444 HMRHLNALHPPEKHGNQSMVQLYEKGYGKDAAGIAMEAIRFAKDSRIDVVLVDTAGRMQD 503
Query: 480 NEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILL 539
NEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +IDGI+L
Sbjct: 504 NEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSQSANPHMIDGIVL 563
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
TKFDTIDDKVGAA++M Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 564 TKFDTIDDKVGAAITMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 613
>gi|148693439|gb|EDL25386.1| mCG7475 [Mus musculus]
Length = 624
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 265/664 (39%), Positives = 369/664 (55%), Gaps = 116/664 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSASSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K E+ N
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTK---EKAKN------ 166
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+ RG K E +E+S G++ G EN + K ++ K
Sbjct: 167 -------NKKRGAKKEG---------VEKS---GLSAGPENGELSKEELIRRKREEFIQK 207
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------N 272
GK D + PK+K K RVW+ +K LD++ P NG+ N
Sbjct: 208 HGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDIN 266
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANL 330
+ + G + D D S +DE ++ KP A K G M + + G +L
Sbjct: 267 L-IRGTGPGGQLQD------LDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSL 319
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 320 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 379
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 380 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 439
Query: 419 CDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 440 CDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 499
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 500 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 559
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 560 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 619
Query: 586 TLLK 589
L+K
Sbjct: 620 ALMK 623
>gi|384495554|gb|EIE86045.1| hypothetical protein RO3G_10756 [Rhizopus delemar RA 99-880]
Length = 609
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 259/651 (39%), Positives = 363/651 (55%), Gaps = 105/651 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ I T+GG +LW ++ + GSP+ LI++ L+EERSG + ++ Y LK
Sbjct: 1 MLDLFTILTKGGFVLW--QKAFAPISGSPVQELIKNVLIEERSGTTEYIQNN----YALK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK-----RTDYSDFDEMFRQ 115
WTF NE+ LVFV VYQ+IL L Y+++LL +K+ F + D+S F +F +
Sbjct: 55 WTFANEVELVFVVVYQKILTLNYLEELLETVKRVFLATFQDMLGQDVMGDFSSFGPIFDR 114
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
L K+ E + LKK + + KK L +GS GS
Sbjct: 115 LLKQVEEKYINLKKQP---RKFEDTKKFEQSL------KGSQAQNTGS------------ 153
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG 235
L HS N +I+E +T NI A + R KG KK+ + +
Sbjct: 154 --LPLSHSGT-NAQIDEDEIT----------KNIRALHLQG--NPRGKGVKKSTSTKTNK 198
Query: 236 SNPDPKKKITKKN---RVWDDSPPESKLD---FTDPAGGNGSNIE------VEAADHGE- 282
+ D +K K RVWD + ++D +++ A + ++ + V+A+ G+
Sbjct: 199 PSEDTSQKKKKSQKQARVWDGQIAKGEMDAYDYSEKAAEDDTDPDRVASQWVDASKLGQK 258
Query: 283 ---SMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPAL 339
+ + +++ + E +EE K TG FS + S G L L+P +
Sbjct: 259 NEKGIYEVQDIVQQQPDDESEEEDAFDQGEPKKSTGLFSYL-TSFTGARELTADTLDPVM 317
Query: 340 KALKDRLMTKNVA--------------------------------AMEEALVRILTPRRS 367
+++ L+ +NVA +ME AL RILTP+ S
Sbjct: 318 STIREHLVAQNVATEIADHLCQSVKSSLLGKKLGSFERVSTAVRNSMEAALKRILTPKTS 377
Query: 368 IDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 427
+D+LRD+ A+ +++PY + F+GVNGVGKSTNL+KV +WLLQ+ +++AACDTFRSGAV
Sbjct: 378 LDMLRDIEQARSEKRPYSICFIGVNGVGKSTNLSKVCFWLLQNNYKILIAACDTFRSGAV 437
Query: 428 EQLRTHARRL---------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQ 478
EQLR HAR L QV +FE+GY KD A +AK+AI A + DVVL+DTAGRMQ
Sbjct: 438 EQLRVHARNLRALQTSGEGQVELFERGYGKDSAGIAKDAIGYAAMHHFDVVLIDTAGRMQ 497
Query: 479 DNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGIL 538
DNEPLMRALSKL+ +N PD ++FVGEALVGN+AVDQL+KFNQ L D S NP+ IDG++
Sbjct: 498 DNEPLMRALSKLVSVNQPDKIIFVGEALVGNEAVDQLTKFNQALKDFSGLQNPRHIDGMI 557
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LTKFDTIDDKVGAALSM Y++G P+ FVG GQ+YTDLK L V +V +LLK
Sbjct: 558 LTKFDTIDDKVGAALSMTYITGQPIYFVGTGQTYTDLKNLKVSHVVHSLLK 608
>gi|357612279|gb|EHJ67898.1| signal recognition particle receptor alpha subunit [Danaus
plexippus]
Length = 601
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 266/637 (41%), Positives = 359/637 (56%), Gaps = 84/637 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIR+ +L+ER+G +F+++ A +L+
Sbjct: 1 MLDLFSIFSKGGIVLW-CFQSTSDIFSPSVNALIRNVILQERTGNNTFSHN----ALSLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD------PKRTDYSDFDEMFR 114
+ NE LVFV YQRIL L YVD L + F + Y D+ DF F
Sbjct: 56 YKLDNEFELVFVVAYQRILQLSYVDKFLNDIHLEFRDKYKNELQGGQHNMDF-DFKTTFE 114
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
+ K+ E A K Q+ K M + + + S ++ GD N +
Sbjct: 115 SVLKQCEQWA---KTQAQIPKQMRSFED----------SQKSKKTVASMIERKGDEKNKK 161
Query: 175 GRKL-ENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
K+ EN G VE E+ +A + + + A K K K K TD V
Sbjct: 162 SVKIIENKSIPNGKVEEPEADNDLIAANRAKLAQKMAA-KNKKEAKKSPKSPKATDRV-- 218
Query: 234 KGSNPDPKKKITKKNRVWD---DSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEV 290
KK RVW+ DS LDF+ G I + G+ ++
Sbjct: 219 ------------KKPRVWELGGDSRDLPSLDFSTDKESFGE-IAPDTQLVGQMKGAIRDL 265
Query: 291 FSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKN 350
+S++ EE H +P KKTG S+F+ + G L + + P L L+D L+ KN
Sbjct: 266 EVEESDASSSEEEETH-QPSPKKTGGMFSIFKGLVGSKALTEESMRPVLDKLRDHLIAKN 324
Query: 351 VAA--------------------------------MEEALVRILTPRRSIDILRDVHAAK 378
VAA + EALV+IL+P+R +DILRD AK
Sbjct: 325 VAADIANKLCDSVAVKLEGKVLGTFDSVATTIKATLTEALVQILSPKRRVDILRDCLHAK 384
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL- 437
+Q +PYV+ F GVNGVGKSTNLAK+ +WL+++++SV++AACDTFR+GAVEQLRTH RRL
Sbjct: 385 QQGRPYVMAFCGVNGVGKSTNLAKICFWLIENRLSVLIAACDTFRAGAVEQLRTHVRRLD 444
Query: 438 -----QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
V ++EKGY KD A +A EAI+ A DVVL+DTAGRMQDNEPLMRAL+KLI
Sbjct: 445 AMHPGSVNLYEKGYGKDAAGIAMEAIKYAADTKYDVVLIDTAGRMQDNEPLMRALAKLIK 504
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+N PDLVLFVGEALVGN+AVDQL KFNQ LAD SSS NP +IDGI+LTKFDTIDDKVGAA
Sbjct: 505 VNEPDLVLFVGEALVGNEAVDQLVKFNQALADHSSSSNPHVIDGIVLTKFDTIDDKVGAA 564
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+SM Y++G P++FVG GQ+YTDLK LN ++V L+K
Sbjct: 565 ISMTYITGQPIVFVGTGQTYTDLKALNATAVVHALMK 601
>gi|148298802|ref|NP_001091807.1| signal recognition particle receptor alpha subunit [Bombyx mori]
gi|111608125|gb|ABH10806.1| signal recognition particle receptor alpha subunit [Bombyx mori]
Length = 610
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 261/645 (40%), Positives = 363/645 (56%), Gaps = 91/645 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ERSG +FN++ A TL+
Sbjct: 1 MLDLFSIFSKGGIVLW-CFQSTSEIFSPSVNALIRSVILQERSGNNTFNHN----ALTLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD------PKRTDYSDFDEMFR 114
+ NE LVFV YQRIL L YVD L + F + Y P D+ +F F
Sbjct: 56 YKLDNEFELVFVVAYQRILQLSYVDKFLNDVHLEFRDKYKNELQTGPCIVDF-NFKTTFD 114
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
++ KE E A K ++ K M + + S ++ GD +
Sbjct: 115 KVLKECEIWA---KSQAKIPKQMRTFED----------SQKSKKTVASMIERKGDE---K 158
Query: 175 GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSK 234
G+K V+I ES+ + NGK +N +D + R K +K + K
Sbjct: 159 GKK---------TVKIVESK--NLTNGKAEEVTN-NTYDDDVIAANRAKLAQKLASKPKK 206
Query: 235 GSNPDPKKKI--TKKNRVWD---DSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEE 289
+K K+ RVW+ D+ + LD++ G+ + + + G+ M
Sbjct: 207 EPKKSSPQKADRVKQPRVWELGGDTRDVAVLDYSTDQPGDAATLLPDTQLIGQ-MTGAIR 265
Query: 290 VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTK 349
+SE EE ++P +KKTG S+ + + G L + + P L L+D L+ K
Sbjct: 266 DLEVESEESSSEEEEVTSQPTSKKTGGMFSLLKGLVGAKALSEETMRPVLDKLRDHLIGK 325
Query: 350 NVAA--------------------------------MEEALVRILTPRRSIDILRDVHAA 377
NVAA + E+LVRIL+P+R +DILRD A
Sbjct: 326 NVAADIANKLCDSVAIKLEGKVLGTFDSVAKTVKATLTESLVRILSPKRRVDILRDCLHA 385
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K++ +PYV+ F GVNGVGKSTNLAK+ +WL+++ +SV++AACDTFR+GAVEQLRTH R L
Sbjct: 386 KQEGRPYVMAFCGVNGVGKSTNLAKICFWLIENDLSVLIAACDTFRAGAVEQLRTHTRHL 445
Query: 438 -------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
V ++EKGY KD A +A EAI+ A+ +DVVL+DTAGRMQDNEPLM
Sbjct: 446 NALHPPARHHARHMVTLYEKGYGKDAAGIAMEAIRYASDTKTDVVLIDTAGRMQDNEPLM 505
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDT 544
RAL+KLI +N PD VLFVGEALVGN+AVDQL KFNQ LAD SSS +P +IDGI+LTKFDT
Sbjct: 506 RALAKLIAVNEPDTVLFVGEALVGNEAVDQLVKFNQALADYSSSSSPHVIDGIVLTKFDT 565
Query: 545 IDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN ++V L+K
Sbjct: 566 IDDKVGAAISMTYITGQPIVFVGTGQTYTDLKALNANAVVHALMK 610
>gi|395846488|ref|XP_003795935.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Otolemur garnettii]
Length = 637
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 259/663 (39%), Positives = 362/663 (54%), Gaps = 101/663 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S + KP+ ++ + G+ K E+ N
Sbjct: 116 DFLRLLREAEESSKIRAPTAMKKFEDSDKAKKPVRSMIETRGEKPK---EKAKN------ 166
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
RG K E + + + +G+ G EN + K ++ K
Sbjct: 167 -------SKKRGAKKEGSDGPLATSKAVLAEKSGLPAGPENGELSKEELIRRKREEFIQK 219
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWD--DSPPESKLDFTDPAGGNGSNIE------- 274
G+ + + PK+K K RVW+ S + LD++ P S
Sbjct: 220 HGRGMEKSSKSMKSDAPKEKGKKAPRVWELGGSTNKEVLDYSTPTTNGTSEAALSEDINL 279
Query: 275 VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLD 331
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 280 IRGTGPGGQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLS 333
Query: 332 KADLEPALKALKDRLMTKNVAA--------------------------------MEEALV 359
+ D+E L ++D L+ KNVAA ++E+LV
Sbjct: 334 REDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLV 393
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AAC
Sbjct: 394 QILQPQRRVDMLRDIMDAQRCQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAAC 453
Query: 420 DTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGS 466
DTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 DTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGF 513
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S
Sbjct: 514 DVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHS 573
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+ P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 MAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAA 633
Query: 587 LLK 589
L+K
Sbjct: 634 LMK 636
>gi|126327281|ref|XP_001365549.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Monodelphis domestica]
Length = 634
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 257/659 (38%), Positives = 356/659 (54%), Gaps = 96/659 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SFN++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFNHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + +S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQHSALSLLNGTFDFHS 115
Query: 112 MFRQLRKEAEARA-----------EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSG 160
F L +EAE + E+ +K+K+ + M ER ++
Sbjct: 116 DFMHLLREAEESSKIRAPTAMKKFEDSEKAKKTVRSM--------------IERPKEKAK 161
Query: 161 GGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKL 220
N + G N + G ++ GV KE K ++
Sbjct: 162 SNKKNKGAKKEGSEGSSSANKGAPTGKPDLPTGPGDGVELSKEELMRK-------KREEF 214
Query: 221 RNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-DSPPESKLDFTDPA-GGNGSNIEVEAA 278
K G+ + + PK+K K RVW LD++ P G E
Sbjct: 215 MQKHGRGAEKSSKSSKSDAPKEKGKKAPRVWALGGSANEALDYSPPTTNGTPETTLPEDI 274
Query: 279 DHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKADL 335
+ ++ D S +DE V +++ KP A K G M + + G +L + D+
Sbjct: 275 NLIRGTQAGGQLQDLDCSSSDDEGVTQNSAKPSASKGALGGMFGMLKGLVGSKSLSREDM 334
Query: 336 EPALKALKDRLMTKNVAA--------------------------------MEEALVRILT 363
E L ++D L+ KNVAA ++E+LV+IL
Sbjct: 335 ESVLDKMRDHLIAKNVAADIALQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQ 394
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR
Sbjct: 395 PQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENNFSVLIAACDTFR 454
Query: 424 SGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+GAVEQLRTH RRL V +FEKGY KD A +A EAI A DVVL
Sbjct: 455 AGAVEQLRTHTRRLSALHPPENHGGRTMVHLFEKGYGKDAAGIAMEAISFARNQAFDVVL 514
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S +
Sbjct: 515 VDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQT 574
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y+DL+ LN K++V L+K
Sbjct: 575 PRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYSDLRSLNAKAVVAALMK 633
>gi|410972313|ref|XP_003992604.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Felis catus]
Length = 639
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/670 (39%), Positives = 368/670 (54%), Gaps = 113/670 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K E+ N
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPK---EKAKN------ 166
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-- 221
S +G K E+ + + + +G+ G EN ++SK + +R
Sbjct: 167 ------SKKNKGAKKESSDGPLVTSKAVPAEKSGLLVGPEN------GVELSKEELIRRK 214
Query: 222 -----NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE 274
K G+ + + PK+K K RVW +K LD++ P +
Sbjct: 215 REEFIQKHGRGMEKSSKSMKSDAPKEKGKKAPRVWALGGCANKEVLDYSTPTTNGAPEVA 274
Query: 275 -------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSI 324
+ G + D D S EDE +++ KP A K G M + +
Sbjct: 275 PPEDINLIRGTGPGGQLQD------LDCSSSEDEGATQNSTKPSATKGTLGGMFGMLKGL 328
Query: 325 AGKANLDKADLEPALKALKDRLMTKNVAA------------------------------- 353
G +L +AD+E L ++D L+ KNVAA
Sbjct: 329 VGSKSLSRADMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQ 388
Query: 354 -MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++
Sbjct: 389 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 448
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 449 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIA 508
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 509 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 568
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 569 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 628
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 629 AKAVVAALMK 638
>gi|338726499|ref|XP_001505146.3| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 1 [Equus caballus]
Length = 638
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/664 (39%), Positives = 365/664 (54%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + G
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKTKNSKKNKGAKK 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVT-GVANGKENTSSNIGAFDVSKLQKLRN 222
DG L G + V E+S ++ G NG E + + + +
Sbjct: 176 EGSDG--------PLATGKA----VPAEKSGLSVGPENGVELSKEELIRRKREEFIQKHG 223
Query: 223 KGGKKTDTVVSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE------ 274
KG +K+ G + PK K K RVW S + LD++ P +
Sbjct: 224 KGMEKS----KPGKSDAPKDKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEVAPPEDIS 279
Query: 275 -VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 280 LIRGTGPGGQLQD------LDCSSSDDEGATQNSTKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTHARRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHARRLSALHPPENHGGRTMVYLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|325187752|emb|CCA22298.1| signal recognition particle receptor subunit alpha [Albugo
laibachii Nc14]
Length = 589
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 258/645 (40%), Positives = 355/645 (55%), Gaps = 114/645 (17%)
Query: 1 MLEQLLIFTRGGLILWT---CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY 57
M++ ++F++ GL+LW+ CK L PI LI+ LL++RSG F +DS Y
Sbjct: 1 MIDHFIVFSKSGLVLWSQTICK-----LNNDPIQALIQQVLLQDRSGDKKFFFDS----Y 51
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS--DFDEMFRQ 115
++WTF N+L LVFV VYQ+IL L+Y+++LL +K+ F + + FD F
Sbjct: 52 CMQWTFENKLELVFVVVYQKILQLMYIEELLERVKKDFVTQFRMEIMGQVPVKFDRQFSI 111
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
+ KE E++ + + R G + S N G
Sbjct: 112 MMKETESK----------------------------YTQKMARKGPRTFESSRKSTNSSG 143
Query: 176 RKLEN----GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-NKGGKKTDT 230
RK+ + + E E +E+ G V +++ R KG KK T
Sbjct: 144 RKIHKKKDLSQESTADKEAEADDADSFGAPQES-----GRLGVKQMRTGRGRKGSKKKPT 198
Query: 231 VVSKGSNPDPKKKITKKNRVWDD---SPPE-SKLDFTDPAGGNGSNIEVEAADHGESMMD 286
K N + KK+TK W+D S E S+LD + ++ AA+ + +
Sbjct: 199 --EKKENQNSWKKMTK----WEDGKLSKKEISQLDHS---------VQASAAEEEAQLCE 243
Query: 287 KEEVF-SSDSESEEDEEVGKHNKPDA----KKTGW------FSSMFQSIAGKANLDKADL 335
+ + SDS+SE D+ + DA K+ W + SI G L K DL
Sbjct: 244 IRKAYIGSDSDSENDDLTSGASSSDAEDSEKEGSWSFGNSKVRNFLSSITGNKILTKEDL 303
Query: 336 EPALKALKDRLMTKNVA--------------------------------AMEEALVRILT 363
EPAL ++ L+ KNVA A+E AL+RILT
Sbjct: 304 EPALNQMRQILIGKNVASEVADELCDSVESNVVGKRLESFTRVSSVVRGALEAALLRILT 363
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
P++S DILR + + + Y +VFVGVNGVGKST+L+K+ Y+L V VM+AACDTFR
Sbjct: 364 PKKSTDILRAILDVRASGRAYSIVFVGVNGVGKSTSLSKICYYLKSKGVKVMIAACDTFR 423
Query: 424 SGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
SGAVEQL HA+ L VP+FE+GY K+PA VA+EAIQ AT N D VL+DTAGRMQ+NEPL
Sbjct: 424 SGAVEQLNQHAKVLDVPLFERGYAKNPAAVAQEAIQHATTNSFDCVLIDTAGRMQNNEPL 483
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
MRAL+KL+ NNPDL+LFVGEALVGND ++QLS F++ LAD S + IDGI++TKFD
Sbjct: 484 MRALAKLVSSNNPDLILFVGEALVGNDGINQLSMFDRALADSSDRQDAHGIDGIVITKFD 543
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
TIDDKVGAA+S+VY +G P+MFVG GQ YT LKKLNV+++++ LL
Sbjct: 544 TIDDKVGAAVSLVYKTGQPIMFVGTGQKYTHLKKLNVQTVMRNLL 588
>gi|157169464|ref|XP_001651530.1| signal recognition particle receptor alpha subunit (sr-alpha)
[Aedes aegypti]
gi|108878422|gb|EAT42647.1| AAEL005856-PA [Aedes aegypti]
Length = 623
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 265/665 (39%), Positives = 369/665 (55%), Gaps = 118/665 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IFT+GG++LW + N + ++ LIRS +L+ERSG+ YD G +L+
Sbjct: 1 MLDLFTIFTKGGIVLWYFRGT-NQIFAPSVNALIRSVILQERSGV----YDHDG--LSLQ 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD----PKRTDYS------DFD 110
+ NE LVFV +Q+IL L Y+D L+ + F + Y + +YS DF
Sbjct: 54 YKLDNEFELVFVVAFQKILQLSYIDKFLSDVHLEFRDKYKNDLRVENRNYSNFNFQDDFT 113
Query: 111 EMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDS 170
+ Q K +A K+ + + K +++ +G + GGS
Sbjct: 114 RILEQAEKWGRMQATLPKQMRSYEDSHKSKKTVASMIER----KGEEKPVGGSKK----- 164
Query: 171 DNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDT 230
+++ + +N E+ E+ V NG + I ++KL K G K +
Sbjct: 165 -SVKIVETKN--------EVPETIVPDQMNGANDDV--ILENRKKMMEKLNKKKGDKPKS 213
Query: 231 VVSKGSNPDPKKKITKKNRVWD---------------DSPPESKLDFTDPAG------GN 269
S P +K K+ RVWD D P + K DFT G
Sbjct: 214 PKS------PPQKSGKQMRVWDLGGNTRDLPNLDRSKDKPEDMKSDFTPTNAIIGTMKGG 267
Query: 270 GSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKAN 329
++EVE+ D+EEV + + S + KK+G S+F+ + G N
Sbjct: 268 IQDMEVESDSEYSEDEDEEEVQAYANSS---------SAAPVKKSGGVFSLFKGLVGSKN 318
Query: 330 LDKADLEPALKALKDRLMTKNVAA--------------------------------MEEA 357
L + D++PAL L+D L++KNVA+ + EA
Sbjct: 319 LTREDMQPALDKLRDHLISKNVASDISHKLCESVAVKLEGKVLGTFDTIATTVKNTLTEA 378
Query: 358 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
LV+IL+P+R +DILRD AK+ ++PYV+ F GVNGVGKSTNLAK+ +WL+++ ++V++A
Sbjct: 379 LVQILSPKRRVDILRDCLEAKKNKRPYVMSFCGVNGVGKSTNLAKICFWLIENNLNVLIA 438
Query: 418 ACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRN 464
ACDTFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A +
Sbjct: 439 ACDTFRAGAVEQLRTHMRHLNALHPPEKHSGRNMVQLYEKGYGKDAAGIAMEAIRHAKDS 498
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DVVL+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD
Sbjct: 499 AVDVVLIDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALAD 558
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLKKLN K++V
Sbjct: 559 YSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKKLNAKAVV 618
Query: 585 KTLLK 589
L+K
Sbjct: 619 HALMK 623
>gi|189531921|ref|XP_697518.3| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Danio rerio]
Length = 650
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 269/681 (39%), Positives = 368/681 (54%), Gaps = 124/681 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG F +++ +
Sbjct: 1 MLDFFAIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQERSGNNFFTHNT----LS 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DF 109
LK+ NE LVFV +Q L L YVD + ++ F + Y + +F
Sbjct: 56 LKYKLDNEFELVFVVGFQANLMLKYVDKFIDDVQLHFRDRYKNELEQRGALKFLLNNYEF 115
Query: 110 DEMFRQLRKEAEARA-----------EELKKSKQVTKPM------NNLKKQGGQLQKGGF 152
+ F +L +EAE + E+ +KSK+ K M + K+QGG+ K
Sbjct: 116 GDDFHRLLREAEESSKAKGPASMRTFEQSQKSKKTVKSMIETKDADKSKEQGGKKSKNA- 174
Query: 153 ERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAF 212
+ SGG A S + +ENG ++ EIE +R + S +G
Sbjct: 175 -KKEAESGGDKAK--AASQAPAKKAVENGSESLTQDEIERNRAKFI-------SKQLG-- 222
Query: 213 DVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPES-KLDFTDPAGGNGS 271
GGK S PK K+ NRVWD S +LD++ G N +
Sbjct: 223 -----------GGKPEKPSKSPKPQGKPKGKV---NRVWDMGGKSSGELDYSGTNGNNSN 268
Query: 272 NIEVEAADHGESMMDKEEVFSSD----------------SESEEDEEVGKHNKPDAKKTG 315
+ + E D + E D E E+ V K AK++G
Sbjct: 269 DAKSEDNDATAEPAIQVESMKGDLRGVDYESSDDEDEEVEEEEKKVVVTNTKKTGAKRSG 328
Query: 316 W--FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------------- 353
+ M + + G NL + D+EP L +KD L+ KNVAA
Sbjct: 329 FGGMFGMLKGLVGSKNLTQEDMEPVLDKMKDHLIAKNVAAEIASQLCDSVAKKLEGKVMG 388
Query: 354 ------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
++++LV+IL P+R +DILRDV A+ QRKP+V+ F GVNGVGKSTNLA
Sbjct: 389 TFTTVASTVKQALQDSLVQILQPKRRVDILRDVLEARSQRKPFVITFCGVNGVGKSTNLA 448
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEK 448
K++YWL+++ +V++AACDTFR+GAVEQLRTH RRL V +FEKGY K
Sbjct: 449 KISYWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPEKHGGQPAVQLFEKGYGK 508
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A +A EAI A G DVVL+DTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVG
Sbjct: 509 DAAGIAMEAIAFARNQGFDVVLIDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVG 568
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
N+AVDQL KFN+ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG
Sbjct: 569 NEAVDQLVKFNRALADHSKSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGT 628
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
GQ+Y+DL+ LN +++V L+K
Sbjct: 629 GQTYSDLRSLNARAVVSALMK 649
>gi|410909652|ref|XP_003968304.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 1 [Takifugu rubripes]
Length = 646
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 271/672 (40%), Positives = 383/672 (56%), Gaps = 110/672 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG SF +D A T
Sbjct: 1 MLDFFTIFSKGGIVLWCFQGAGVTQSFTG-PVNALIRSVILQERSGNNSFTHD----ALT 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--------KRTDYS--- 107
LK+ NE L+FV +Q+IL L YVD L+ ++ F + Y K ++S
Sbjct: 56 LKYKLDNEFELLFVVGFQKILTLTYVDKLIDDIQLHFRDRYKNELVQKGALKFLNHSFQF 115
Query: 108 --DFDEMFRQLRKEAEARA-------EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNR 158
DF ++ R+ ++AR+ +E +KS++ K M K +GG + + +
Sbjct: 116 ENDFIKLLREAEYSSKARSPAHMRTFKESEKSQKTVKSMIETKGGDKGKDQGGKKNKNTK 175
Query: 159 SGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
G A +LE + + ++++ V NG + +S +Q
Sbjct: 176 KEGEYA------------ELEKAEQHKSSFSVQKT----VENGNQGLTSE------EIMQ 213
Query: 219 KLRNKGGKK--TDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSNIEV 275
K R K K T V +P P+K KK RVWD+ ++ LD+++ G +N
Sbjct: 214 KKREKFFSKRMVTTAVKPSKSPKPQKPRGKKMRVWDNGETSAENLDYSERNGDGSANDGD 273
Query: 276 EAADHGESMMDKE---EVFSSDSESEEDEE-------VGKHNKPDAKKTGWFSSM---FQ 322
+ A SM + ++ S D +S E+EE V + +KP++KK+G F M +
Sbjct: 274 QEAQSDPSMQLRSMEGDLLSVDYDSSEEEEMDEERVVVSETSKPNSKKSGGFGGMFGMLK 333
Query: 323 SIAGKANLDKADLEPALKALKDRLMTKNVAA----------------------------- 353
+ G NL + D+E L+ +KD L+ KNVAA
Sbjct: 334 GLVGSKNLTREDMESVLEKMKDHLIAKNVAADISAQLCDSVAKKLEGKVMGTFTTVASTV 393
Query: 354 ---MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
++++LV IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKSTNLAK+++WL+++
Sbjct: 394 KQALQDSLVHILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAKISFWLIEN 453
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEA 457
+V++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EA
Sbjct: 454 GFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPERHGGRPMVHLYEKGYGKDAAGIAMEA 513
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
I A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL K
Sbjct: 514 IAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVK 573
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DL+
Sbjct: 574 FNQALADHSMSDRPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRN 633
Query: 578 LNVKSIVKTLLK 589
LN +++V L+K
Sbjct: 634 LNARAVVSALMK 645
>gi|322779356|gb|EFZ09612.1| hypothetical protein SINV_09353 [Solenopsis invicta]
Length = 654
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 263/643 (40%), Positives = 366/643 (56%), Gaps = 84/643 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ER+G SF +DS L+
Sbjct: 42 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERTGNHSFEHDS----LRLQ 96
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEM-FRQLRKE 119
+ NE LVFV YQ+IL L YVD L + F + + + S F F
Sbjct: 97 YKLDNEFELVFVVAYQKILQLSYVDKFLNDIHLEFRDRFKNDLENSSWFTNFEFEHAYHV 156
Query: 120 AEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKL 178
RAE +S+ ++ K M + + S ++ D D+ + K+
Sbjct: 157 VLERAEHWSRSQAKIPKQMRTFDE----------SQKSKKTVASMIERKDDKDDKKQAKI 206
Query: 179 ENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNP 238
++ V E+ + +V NG+ + + I ++++ + G+K K +P
Sbjct: 207 QD----VPKQELPKQQVQH--NGQLDEETLIA----NRMKLAQKMAGQKKKA--DKQKSP 254
Query: 239 DPKKKITKKNRVWD---DSPPESKLDFT-DPAGGNGSNIEVEAADHGE---SMMDKEEVF 291
P+K KK R+W+ + + L+ T D N + G+ S+ D E V
Sbjct: 255 KPEKA-GKKPRIWELGGTTKDLATLERTKDKPEENDEYVAANTTLVGQMKGSIRDLE-VN 312
Query: 292 SSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV 351
S +S + EE+ + + KKT FS MF+S+ G +L + D+ P L+ LKD L+TKNV
Sbjct: 313 SESEDSSDQEEIEQSKQQVQKKTSMFS-MFKSLVGSKSLKQDDMLPVLEKLKDHLITKNV 371
Query: 352 AA--------------------------------MEEALVRILTPRRSIDILRDVHAAKE 379
AA + +ALV+IL+P+R IDILRD AK+
Sbjct: 372 AADIAQKLCDSVGTKLEGKILGTFDSVANTVKTTLTDALVQILSPKRRIDILRDALEAKK 431
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ- 438
KPYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH R L
Sbjct: 432 SSKPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHMRHLNA 491
Query: 439 ------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
V ++EKGY KD A +A EAI+ A + DVVLVDTAGRMQDNEPLMRA
Sbjct: 492 LHPPEKHGNQSMVQLYEKGYGKDAAGIAMEAIRFAKDSRIDVVLVDTAGRMQDNEPLMRA 551
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +IDGI+LTKFDTID
Sbjct: 552 LAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSQSANPHIIDGIVLTKFDTID 611
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DKVGAA++M Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 612 DKVGAAITMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 654
>gi|194762610|ref|XP_001963427.1| GF20395 [Drosophila ananassae]
gi|190629086|gb|EDV44503.1| GF20395 [Drosophila ananassae]
Length = 628
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 254/656 (38%), Positives = 366/656 (55%), Gaps = 95/656 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGN------ALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ +++FT+GG++LW K G+ + S I+ LIR +LEER+ A + Y+
Sbjct: 1 MLDFVVVFTKGGVVLWNSKSNGSTSTPSESTFSSCINGLIRGVILEERNTEAKY-YEEDH 59
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP-----KRTDYSDF 109
A +++ NEL LV+ AV+Q+++ L Y+D LA M+ +F E + + ++ DF
Sbjct: 60 LA--VQFKLDNELDLVYAAVFQKVIKLTYLDTFLADMQLAFREKFGGISAAGRLSESYDF 117
Query: 110 DEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGD 169
D F+++ AE + + K+ + + N +K S ++ DDG
Sbjct: 118 DREFKRVLSAAEEASAKQVKAPKAMRSYNESQK-------------SKKTVASMIQDDGK 164
Query: 170 SDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTD 229
R V I+E++ A + I A + KL++ + KKT
Sbjct: 165 KSAPEKR-----------VNIQETQPQQQAPLSPRSKEEIIAENRRKLRE-KLTPTKKTS 212
Query: 230 TVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEE 289
+K S +K KK RVWD D + +++ ++ + +
Sbjct: 213 PGDTKPSKSSASEKAGKKPRVWDLGGNSKDAVLLDRSKDAPEDVQYQSINSDLVGTMQGV 272
Query: 290 VFSSDSESEEDEEVGKHNKPDA-----------KKTGWFSSMFQSIAGKANLDKADLEPA 338
+ D ESE+DE G + + K+ G S F+ I G + A+L+PA
Sbjct: 273 IPDLDVESEDDEANGTDSTDEEESEELVQSRKNKRGGGLLSYFKGIVGAKTMSLAELQPA 332
Query: 339 LKALKDRLMTKNVAA--------------------------------MEEALVRILTPRR 366
L+ ++D L++KNVAA + ++LVRIL+P+R
Sbjct: 333 LEKMRDHLISKNVAAEIAAKLCDSVASSLEGKQMGTFDSVAGQVKEALTQSLVRILSPKR 392
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
IDI+RD +K +PY ++F GVNGVGKSTNLAK+ +WL+++ +V++AACDTFR+GA
Sbjct: 393 RIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGA 452
Query: 427 VEQLRTHAR-------------RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
VEQLRTH R R V ++EKGY KD A +A EAI+ A DVVLVDT
Sbjct: 453 VEQLRTHTRHLNALHPATKHNGRTMVQLYEKGYGKDAAGIAMEAIKFAHDTKVDVVLVDT 512
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD SS+ NP +
Sbjct: 513 AGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHI 572
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 573 IDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVTAVVNSLMK 628
>gi|354481117|ref|XP_003502749.1| PREDICTED: signal recognition particle receptor subunit alpha
[Cricetulus griseus]
gi|344255026|gb|EGW11130.1| Signal recognition particle receptor subunit alpha [Cricetulus
griseus]
Length = 636
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 258/664 (38%), Positives = 364/664 (54%), Gaps = 104/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + +
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKSKKPVRSMIETRGEKTKEKTKNNKKKGAKKE 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+D + + + +G+ G EN + K ++ K
Sbjct: 176 GSD----------------GPLATSKTAPAEKSGLPVGPENGELSKEELIRRKREEFIQK 219
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------N 272
GK D + PK+K K RVW+ +K LD++ P NG+ N
Sbjct: 220 HGKGLDKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSAPTT-NGTPEAALSEDIN 278
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANL 330
+ + G + D D S +DE ++ KP A K G M + + G +L
Sbjct: 279 L-IRGTGPGGQLQDL------DCSSSDDEGATQNTKPSATKGALGGMFGMLKGLVGSKSL 331
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 332 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 391
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 392 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 451
Query: 419 CDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 452 CDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 511
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 512 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 571
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 572 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 631
Query: 586 TLLK 589
L+K
Sbjct: 632 ALMK 635
>gi|77627979|ref|NP_001029322.1| signal recognition particle receptor subunit alpha [Rattus
norvegicus]
gi|76779803|gb|AAI05783.1| Signal recognition particle receptor ('docking protein') [Rattus
norvegicus]
Length = 636
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 258/664 (38%), Positives = 364/664 (54%), Gaps = 104/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + +
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKKGSKKE 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+D + + + +G+ G EN + K ++ K
Sbjct: 176 GSD----------------GPLATSKTAPAEKSGLPVGPENGELSKEELIRRKREEFIQK 219
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------N 272
GK D + PK+K K RVW+ +K LD++ P NG+ N
Sbjct: 220 HGKGLDKSSKSTKSDIPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDIN 278
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANL 330
+ + G + D D S +DE ++ KP A K G M + + G +L
Sbjct: 279 L-IRGTGPGGQLQD------LDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSL 331
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 332 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 391
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 392 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 451
Query: 419 CDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 452 CDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 511
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 512 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 571
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 572 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 631
Query: 586 TLLK 589
L+K
Sbjct: 632 ALMK 635
>gi|255082426|ref|XP_002504199.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226519467|gb|ACO65457.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 650
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/311 (65%), Positives = 237/311 (76%), Gaps = 38/311 (12%)
Query: 316 WFS-----SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------ 352
W S S+ Q + GK+ LD DLEP L+ LK M KNVA
Sbjct: 337 WLSGVLGNSLVQGVVGKSALDDEDLEPVLEKLKTNFMNKNVAEDIAERLCESVAASLRGR 396
Query: 353 --------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKST 398
AMEEAL RILTP+RS+DILR+V AAK+ +PY +VFVGVNGVGKST
Sbjct: 397 KLASFSSLSAMVRTAMEEALTRILTPKRSVDILREVRAAKDAGRPYTIVFVGVNGVGKST 456
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAI 458
NL+KVAYWLLQH V VM+AACDTFR+GAVEQLRTH +RL VP+FE+GYEKDPA VA EAI
Sbjct: 457 NLSKVAYWLLQHDVKVMIAACDTFRAGAVEQLRTHCKRLGVPLFERGYEKDPANVASEAI 516
Query: 459 QEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKF 518
+ A R G D VLVDTAGRMQDNEPLMRALSKLI +N+PDL LFVGEALVGNDAVDQLSKF
Sbjct: 517 KAAQRQGCDAVLVDTAGRMQDNEPLMRALSKLINMNDPDLTLFVGEALVGNDAVDQLSKF 576
Query: 519 NQKLADLSSSP-NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
N++LADL+++ +LIDGI+L+KFDTIDDKVGAALSMVY SGAPV+FVGCGQ+YTDL++
Sbjct: 577 NERLADLNANARRTKLIDGIVLSKFDTIDDKVGAALSMVYTSGAPVVFVGCGQTYTDLRR 636
Query: 578 LNVKSIVKTLL 588
LNVKS+VK LL
Sbjct: 637 LNVKSVVKILL 647
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 82/119 (68%), Gaps = 5/119 (4%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ + IFT+GGL+L++ LKG+P+D LIR+ LLEER G F Y S A+YTLK
Sbjct: 1 MLDAVQIFTKGGLVLFSWSLGMTTLKGNPVDALIRTQLLEERGGETEFAYSSGNASYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY----DPKRTDYSDF-DEMFR 114
W+FHNELGLVFVAVYQRIL L YVDDLL K+SF Y DP R Y+ F DE+ R
Sbjct: 61 WSFHNELGLVFVAVYQRILALTYVDDLLESAKRSFVAGYFDKSDPGRASYAGFGDELTR 119
>gi|195479500|ref|XP_002100909.1| Gtp-bp [Drosophila yakuba]
gi|194188433|gb|EDX02017.1| Gtp-bp [Drosophila yakuba]
Length = 617
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 265/648 (40%), Positives = 368/648 (56%), Gaps = 90/648 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW G++ S I++LIR +LEER+ A + + A ++
Sbjct: 1 MLDFVVIFTKGGVVLWHSNASGSSF-ASCINSLIRGVILEERNTEAKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSDFDEMFRQLRKE 119
+ NEL LV+ A++Q+++ L Y+D LA M+ +F E Y D + D DFD +R++
Sbjct: 57 FKLDNELDLVYAAIFQKVIKLNYLDGFLADMQTAFKEKYGDIRLGDDYDFDREYRRVLSA 116
Query: 120 AEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLE 179
AE + + K+ + + N +K S ++ DD R
Sbjct: 117 AEEASAKQVKAPKAMRSYNESQK-------------SKKTVASMIQDDKKPVEKR----- 158
Query: 180 NGHSNVGNVEIEESRVTGVAN-GKENTSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGS 236
V I+ES + T S+ + +KLR K KKT SK S
Sbjct: 159 --------VNIQESPPPAKSQPSSPATGSSKDDIIMENRRKLREKLTPTKKTSPSDSKPS 210
Query: 237 NPDPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESM---MDKE 288
P +K KK RVWD +S LD + P NI E + + +D E
Sbjct: 211 KP-ASEKAGKKPRVWDLGGNSKDAVMLDRSKDTPEDVQYQNINSELVGTMQGVIRDLDVE 269
Query: 289 EVFSSDSESEEDEEVGKHNKPDAKKT--GWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
+++E E EE + +KK+ G S F+ I G + ADL+PAL+ ++D L
Sbjct: 270 SEAEAENEEESSEEEQEEQVQVSKKSKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHL 329
Query: 347 MTKNVA--------------------------------AMEEALVRILTPRRSIDILRDV 374
++KNVA A+ ++LVRIL+P+R IDI+RD
Sbjct: 330 ISKNVATEIAAKLCDSVATSLDGKQMGTFDSIASQVKEALTQSLVRILSPKRRIDIIRDA 389
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
+K +PY ++F GVNGVGKSTNLAK+ +WL+++ +V++AACDTFR+GAVEQLRTH
Sbjct: 390 LESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHT 449
Query: 435 R-------------RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
R R V ++EKGY KD A +A EAI+ A DVVLVDTAGRMQDNE
Sbjct: 450 RHLNALHPAAKHDGRTMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNE 509
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTK 541
PLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD SS+ NP +IDGI+LTK
Sbjct: 510 PLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTK 569
Query: 542 FDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
FDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 570 FDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 617
>gi|193662214|ref|XP_001947029.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog [Acyrthosiphon pisum]
Length = 627
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 256/663 (38%), Positives = 368/663 (55%), Gaps = 110/663 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKG--SPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + + +++LI++ +L+ER+ ++ NY+ + +
Sbjct: 1 MLDLFTIFSKGGIVLWCFQSTSQISQFFIPSVNSLIKTVILQERTS-SNNNYEQD--SLS 57
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY--DPKRTDYS---DFDEMF 113
LK+ NE LVFV +Q+IL L YVD L ++ F + Y D R +Y +F + F
Sbjct: 58 LKYRLDNEFDLVFVIAFQKILQLSYVDKFLDDIQLEFRDKYKNDLARKNYFMEFEFSKNF 117
Query: 114 RQLRKEAE----ARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGD 169
+++ K AE A+A K+ + + + K +++ G D
Sbjct: 118 KEVLKSAEEWGKAQACIPKQMRTFNESTKSKKTVASMIERTG----------------DD 161
Query: 170 SDNMRGRKLENGHSNVGNVEIEESRVTG-----VANGKENTSSNIGAFDVSKLQKLRNKG 224
+N + K+ + N + E+ + V+ + + + +GA + +KL+K + K
Sbjct: 162 KENKKNVKITDTQKN--DKEVNHNGVSFNEEDLITQNRLKMAQKMGAMNSNKLKKNKEKV 219
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESKLDFTD--PAGGNGSNIEVEAAD 279
P P K TK+ R W + S LD+T P S IE+E +
Sbjct: 220 -------------PKPSPKATKQPRTWPLGGAAKDISSLDYTKDKPNNNADSPIEIETNN 266
Query: 280 HGESMM--------DKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLD 331
M + +S+ + + + K D+KK+ + SMF+ + G+ NL
Sbjct: 267 EIVGQMVGSIKDIEIDSDSDEEESDEKFETAAERKKKNDSKKSVF--SMFKGLVGRKNLT 324
Query: 332 KADLEPALKALKDRLMTKNVA--------------------------------AMEEALV 359
D++P L+ LK+ L+ KNVA M E+LV
Sbjct: 325 ATDMDPVLEKLKEHLVAKNVAIEIATKLCDSVSSKLEGKVLGSFESVASTVKNTMIESLV 384
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
+IL+P+R IDILRD AK+ KPYV+ F GVNGVGKSTNLAK+ +WL+++ + V++AAC
Sbjct: 385 QILSPKRRIDILRDAMMAKKNEKPYVMAFCGVNGVGKSTNLAKICFWLIENNLRVLIAAC 444
Query: 420 DTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGS 466
DTFR+GAVEQLRTH + L V ++EKGY KD A +A EAI A
Sbjct: 445 DTFRAGAVEQLRTHTKHLNALHPAKKHNDQQMVQLYEKGYGKDAAGIAMEAINHAKEAKY 504
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
D+VLVDTAGRMQDNEPLMRAL+KLI +N PD+VLFVGEALVGN+AVDQL KFNQ LAD S
Sbjct: 505 DIVLVDTAGRMQDNEPLMRALTKLIKVNEPDMVLFVGEALVGNEAVDQLVKFNQALADYS 564
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
SS P LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V
Sbjct: 565 SSVTPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVAA 624
Query: 587 LLK 589
L+K
Sbjct: 625 LMK 627
>gi|195399363|ref|XP_002058290.1| GJ16008 [Drosophila virilis]
gi|194150714|gb|EDW66398.1| GJ16008 [Drosophila virilis]
Length = 633
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 262/669 (39%), Positives = 376/669 (56%), Gaps = 116/669 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW E G + I++LIR +LEER+ + + + A ++
Sbjct: 1 MLDFVVIFTKGGIVLWNSNESGKNY-AACINSLIRGVILEERNTESKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTDYSDFDEMFR 114
+ NEL +V+ AV+Q+++ L Y+D LA M+ +F E + + DY +F++ FR
Sbjct: 57 FKLDNELDVVYAAVFQKVIKLNYLDTFLADMQTAFQEKFGGIGHQERLAIDY-EFEQEFR 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
+ AEA + + K+ + + N +K S ++ DD S
Sbjct: 116 LVLSAAEAASAKQGKAPKAMRSYNESQK-------------SKKTVASMLQDDKRS---- 158
Query: 175 GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK--GGKKTDT-- 230
+N V I+ES + SN ++ +KLR K KK +
Sbjct: 159 -------VTNEKRVNIQESPPATKSQPSSPPRSNADIIQENR-RKLREKLTPTKKAASAA 210
Query: 231 ----VVSKGSNPDPKKKITKKNRVWD---------------DSPPESKL-----DFTDPA 266
+ +K +N K++ KK RVWD D+P +++L D
Sbjct: 211 ASAGLEAKPNNDREKERAGKKPRVWDLGGNSKDAMLLDRSKDAPEDAQLQTINNDLVGTM 270
Query: 267 GGNGSNIEVEA-ADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIA 325
G+ +++VE+ +D +S S DSE E+ E+ + K+ S F+ I
Sbjct: 271 QGSIRDLDVESDSDAADSEA------SDDSEQEQQEQQARRALTRKPKSAGLLSYFKGIV 324
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G L +DL+PAL+ ++D L++KNVA A
Sbjct: 325 GAKTLTLSDLQPALEKMRDHLISKNVASEIAAKLCDSVATSLEGKQMGTFDSIANMVKEA 384
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+ ++LVRIL+P+R IDI+RD +K KPY ++F GVNGVGKSTNLAK+ +WL+++ +
Sbjct: 385 LTQSLVRILSPKRRIDIIRDALESKRNGKPYTIIFCGVNGVGKSTNLAKICFWLIENDFN 444
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQE 460
V++AACDTFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+
Sbjct: 445 VLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHNGRTMVQLYEKGYGKDAAGIAMEAIKY 504
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ
Sbjct: 505 AHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQ 564
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LAD SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV
Sbjct: 565 SLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINV 624
Query: 581 KSIVKTLLK 589
++V +L+K
Sbjct: 625 NAVVSSLMK 633
>gi|443683855|gb|ELT87957.1| hypothetical protein CAPTEDRAFT_155737 [Capitella teleta]
Length = 626
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 259/652 (39%), Positives = 369/652 (56%), Gaps = 90/652 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW ++ +L S ++ LI+S +L+ER G++SF ++ A TLK
Sbjct: 1 MLDLFTIFSKGGIVLWCFQDTAQSLTSS-VNALIKSVILQERGGMSSFEHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDEMFR 114
+ NE LVFV YQ+IL L YVD L ++ F Y +++DF+ F+
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNEIQMEFRNKYKDDLQVGKISRNFTDFEATFQ 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNL---KKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
++ KE EA + E K+ + + + K+ + K E SN S A D+
Sbjct: 116 RILKETEAASREEAKAPKAMRSYDQSDKSKRSVASMIKNRPEEKSN-SKKKQAKDNQ--- 171
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV 231
+ LEN N ++E + + +E+T + + Q+ K
Sbjct: 172 ----KNLENTAKN----DVEGKIIETASKAEEDT--------LKRNQEKFFASKMKKSKS 215
Query: 232 VSKGSNPDPKKKITKKNRVW---DDSPPESKLDFTD-----PAGGNGSNIEVEAADHGES 283
+ + PKK++ K+ R W +S LD+ P G +N E E G
Sbjct: 216 SNGKGSEGPKKRV-KEARQWVHGGNSKDAKNLDYCAEESELPVNGEVAN-EEEKQWVGRM 273
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW-FSSMFQSIAGKANLDKADLEPALKAL 342
D + + SE EE+ KP + G+ F S + + G +L + D++PAL +
Sbjct: 274 RGDLQNMDEESSEEEEEVSAPVKGKPAVARGGFGFLSGLKGLVGAKSLTEEDIKPALNKM 333
Query: 343 KDRLMTKNVAA--------------------------------MEEALVRILTPRRSIDI 370
+D L+ KNVAA + ++ V++L+ +R +DI
Sbjct: 334 RDHLIAKNVAAEIAERLCESVSTRLQGKVLGTFNTVASTVKNALNDSCVQLLSHKRRVDI 393
Query: 371 LRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 430
LRD A++Q++PYVV F GVNGVGKSTNLAKVA+WL+++ V++AACDTFR+GAVEQL
Sbjct: 394 LRDCLEARQQKRPYVVTFCGVNGVGKSTNLAKVAFWLIENGFRVLIAACDTFRAGAVEQL 453
Query: 431 RTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
RTH R+L V ++EKGY +D A +A EA+ A DVVLVDTAGRM
Sbjct: 454 RTHCRKLNALHPSDTHNGQKMVELYEKGYGRDAAGIAMEAVNYARDVRMDVVLVDTAGRM 513
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
QDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL+KFNQ LAD S+ P+LIDGI
Sbjct: 514 QDNEPLMRALAKLIKVNQPDLVLFVGEALVGNEAVDQLTKFNQALADHSNMETPRLIDGI 573
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LLTKFDTIDD+VGAA+SM Y +G P++FVG GQ+YTDLK LN K++V++LL+
Sbjct: 574 LLTKFDTIDDQVGAAISMTYTTGQPIVFVGTGQTYTDLKNLNAKAVVQSLLR 625
>gi|194889839|ref|XP_001977167.1| GG18880 [Drosophila erecta]
gi|190648816|gb|EDV46094.1| GG18880 [Drosophila erecta]
Length = 615
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 260/646 (40%), Positives = 364/646 (56%), Gaps = 88/646 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW G++ S I++LIR +LEER+ A + + A ++
Sbjct: 1 MLDFVVIFTKGGVVLWHSNASGSSF-ASCINSLIRGVILEERNTEAKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSDFDEMFRQLRKE 119
+ NEL LV+ A++Q+++ L Y+D LA M+ +F E Y D + D DFD ++++
Sbjct: 57 FKLDNELDLVYAAIFQKVIKLNYLDGFLADMQVAFKEKYGDIRLGDDYDFDREYQRVLGA 116
Query: 120 AEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLE 179
AE + + K+ + + N +K S ++ DD R
Sbjct: 117 AEEASAKQVKAPKTMRSYNESQK-------------SKKTVASMIQDDKKPVEKR----- 158
Query: 180 NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSN 237
V I+ES + T+ ++ +KLR K KKT SK S
Sbjct: 159 --------VNIQESPPPSKSQPSSPTTRSMDDIIKENRRKLREKLTPTKKTSPSDSKPSK 210
Query: 238 PDPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESMMDKEEVFS 292
P +K KK RVWD +S LD + P NI E + ++ +V S
Sbjct: 211 P-ASEKAGKKPRVWDLGGNSKDAVILDRSKDTPEDVQYQNINSELVGTMQGVIRDLDVES 269
Query: 293 SDSESEEDEEVGKHNKPDAK----KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMT 348
D E++ + + + K G S F+ I G + ADL+PAL ++D L++
Sbjct: 270 DDEADSEEDSSEEQQEEQVQSKKIKRGGLLSYFKGIVGAKTMSLADLQPALDKMRDHLIS 329
Query: 349 KNVA--------------------------------AMEEALVRILTPRRSIDILRDVHA 376
KNVA A+ ++LVRIL+P+R IDI+RD
Sbjct: 330 KNVATEIAAKLCDSVATSLDGKQMGTFDSIASQVKEALTQSLVRILSPKRRIDIIRDALE 389
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR- 435
+K +PY ++F GVNGVGKSTNLAK+ +WL+++ +V++AACDTFR+GAVEQLRTH R
Sbjct: 390 SKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRH 449
Query: 436 ------------RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
R V ++EKGY KD A +A EAI+ A DVVLVDTAGRMQDNEPL
Sbjct: 450 LNALHPAAKHDGRTMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPL 509
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
MR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD SS+ NP +IDGI+LTKFD
Sbjct: 510 MRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFD 569
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
TIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 570 TIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 615
>gi|115497558|ref|NP_001068590.1| signal recognition particle receptor subunit alpha [Bos taurus]
gi|122139924|sp|Q3MHE8.1|SRPR_BOVIN RecName: Full=Signal recognition particle receptor subunit alpha;
Short=SR-alpha; AltName: Full=Docking protein alpha;
Short=DP-alpha
gi|75773717|gb|AAI05265.1| Signal recognition particle receptor (docking protein) [Bos taurus]
gi|440908885|gb|ELR58862.1| Signal recognition particle receptor subunit alpha [Bos grunniens
mutus]
Length = 639
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 260/668 (38%), Positives = 367/668 (54%), Gaps = 109/668 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + G
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKK 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-- 221
DG + E +G+ G EN ++SK +++R
Sbjct: 176 EGSDGPLATSKAAPAEK---------------SGLPVGPENGE------ELSKEEQIRRK 214
Query: 222 -----NKGGKKTDTVVSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE 274
K G+ + + PK+K K RVW S + LD++ P +N
Sbjct: 215 REEFIQKHGRGMEKSSKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPT----TNGA 270
Query: 275 VEAADHGESMMDK-----EEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAG 326
EAA + + + ++ D S +DE +++ KP A K G M + + G
Sbjct: 271 PEAAPPEDINLIRGTGPGRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVG 330
Query: 327 KANLDKADLEPALKALKDRLMTKNVAA--------------------------------M 354
+L + D+E L ++D L+ KNVAA +
Sbjct: 331 SKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQAL 390
Query: 355 EEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSV 414
+E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV
Sbjct: 391 QESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSV 450
Query: 415 MMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEA 461
++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 451 LIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFA 510
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+
Sbjct: 511 RNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRA 570
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVK 581
LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K
Sbjct: 571 LADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAK 630
Query: 582 SIVKTLLK 589
++V L+K
Sbjct: 631 AVVAALMK 638
>gi|348508203|ref|XP_003441644.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 1 [Oreochromis niloticus]
Length = 647
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 264/680 (38%), Positives = 376/680 (55%), Gaps = 125/680 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG +SF++ +
Sbjct: 1 MLDFFTIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQERSGNSSFSH----GGLS 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY------------ 106
LK+ NE L+FV +Q+IL L YVD + ++ F + Y +
Sbjct: 56 LKYKLDNEFELIFVVGFQKILTLTYVDKFINDVQLRFRDRYKNELEQKGALKLLNNSFEF 115
Query: 107 -SDFDEMFRQLRKEAEARA-------EELKKSKQVTKPMNNLKKQGG-----QLQKGGFE 153
+DF+ + + ++AR E+ KS++ K M ++ +GG Q K
Sbjct: 116 ENDFNMLLSVAEESSKARGPAGMRTFEQSGKSQKTVKSM--IETKGGDKGKEQGGKKNKN 173
Query: 154 RGSNRSGGGSANDDGDSDNMRGRKL-ENGHSNVGNVEIEESRVTGVANGKENTSSNIGAF 212
A D D + G+K+ ENG+ ++ EI
Sbjct: 174 AKKEAPAAQPAKGDQDKASPSGQKMVENGNQSLTAEEI---------------------- 211
Query: 213 DVSKLQKLRNKGGKKTDTVVSK--GSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGN 269
LQK R + +K S+ +P P+K K+NRVW+ ++ LD++D GN
Sbjct: 212 ----LQKNREEFFRKHRPGASEKPSKSPKPQKPKGKQNRVWNTGGRSTRDLDYSD-KNGN 266
Query: 270 GS------NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKH---------NKPDAKKT 314
GS N+E + + K ++ S + ES ++EE+ + KP +KK
Sbjct: 267 GSPNGAEQNLEAQFDPEMQPASMKGDLLSVEYESSDEEEMEEEDEEVVVRETTKPSSKKG 326
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------- 353
G M + + G +L + D+EP L+ +KD L+ KNVAA
Sbjct: 327 GGLFGMLKGLVGSKSLTREDMEPVLEKMKDHLIAKNVAADIASQLCDSVAKKLEGKVMGT 386
Query: 354 -----------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
++++LV+IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKSTNLAK
Sbjct: 387 FTTVASTVKQALQDSLVQILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAK 446
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKD 449
+++WL+++ +V++AACDTFR+GAVEQLR H RRL V ++EKGY KD
Sbjct: 447 ISFWLIENGFTVLIAACDTFRAGAVEQLRIHQRRLNSLHPPEKHGGRPVVQLYEKGYGKD 506
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A +A EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN
Sbjct: 507 AAGIAMEAIAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGN 566
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
+AVDQL KFNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG G
Sbjct: 567 EAVDQLVKFNQALADHSMSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTG 626
Query: 570 QSYTDLKKLNVKSIVKTLLK 589
Q+Y DL+ LN +++V L+K
Sbjct: 627 QTYNDLRSLNARAVVSALMK 646
>gi|195438862|ref|XP_002067351.1| GK16226 [Drosophila willistoni]
gi|194163436|gb|EDW78337.1| GK16226 [Drosophila willistoni]
Length = 624
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 261/666 (39%), Positives = 371/666 (55%), Gaps = 119/666 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW G S I++LIR +LEER+ + + + A ++
Sbjct: 1 MLDFVVIFTKGGIVLWNSNTSGQNF-SSCINSLIRGVILEERNTESKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMM----KQSFSEIYDPKRTDYS-DFDEMFRQ 115
+ NEL LV+ AV+Q+++ L Y+D L+ M K+ F +I +R D DF++ FR+
Sbjct: 57 FKLDNELDLVYAAVFQKVIKLNYLDGFLSDMQLAFKEKFGDISAGERLDNDYDFEQEFRR 116
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
+ AE + ++ K+ + + N +K S
Sbjct: 117 VLSSAEQASAKVLKAPKAMRSYNESQK---------------------------SKKTVA 149
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG 235
+EN + + E RV + E +S D+ +Q+ R K +K T K
Sbjct: 150 SMIENPDKDKAKKPVVEKRV-NIQESPEPSSPPRSKEDI--IQENRRKMREKL-TPTKKS 205
Query: 236 SN---PDP----KKKITKKNRVWD---------------DSPPESKL-----DFTDPAGG 268
+N P P +K KK RVWD D+P + + D G
Sbjct: 206 TNSSAPSPVESRPEKAGKKPRVWDLGGSNRDAVLLDRSKDTPEDVQYQTINNDLVGTMQG 265
Query: 269 NGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKA 328
+++VE+AD E K +E +++EE ++ + KK G S F+ I G
Sbjct: 266 GIRDLDVESADEDEDTGYK-------TEEDQEEEEEDNSSRNKKKRGGLLSYFKGIVGAK 318
Query: 329 NLDKADLEPALKALKDRLMTKNVA--------------------------------AMEE 356
+ + DL+PAL+ ++D L++KNVA A+ +
Sbjct: 319 TMSREDLQPALEKMRDHLISKNVASEIAIKLCDSVATSLEGKQMGTFDSIATLVKEALTQ 378
Query: 357 ALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMM 416
+LVRIL+P+R IDI+RD +K KPY ++F GVNGVGKSTNLAK+ +WL+++ +V++
Sbjct: 379 SLVRILSPKRRIDIIRDALESKRNGKPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLI 438
Query: 417 AACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATR 463
AACDTFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A
Sbjct: 439 AACDTFRAGAVEQLRTHTRHLNALHPPAKHNNRSMVQLYEKGYGKDAAGIAMEAIKYAHD 498
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LA
Sbjct: 499 TKVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLA 558
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
D SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++
Sbjct: 559 DYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAV 618
Query: 584 VKTLLK 589
V +L+K
Sbjct: 619 VNSLMK 624
>gi|383848887|ref|XP_003700079.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog isoform 2 [Megachile rotundata]
Length = 613
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 257/647 (39%), Positives = 362/647 (55%), Gaps = 92/647 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ER+G +F YDS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERTGNHTFEYDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY--DPKRTDYSDFDEMFRQLRK 118
+ NE LVFV YQ+IL L Y+D L + F + + + +++ + ++ F + +
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYIDKFLNDIHLEFRDRFKNELEKSQWF-YNYEFSRNYE 114
Query: 119 EAEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRK 177
A AE+ +++ ++ K M + + S ++ D DN +
Sbjct: 115 HVLAMAEQWARTQAKIPKQMRTFDE----------SQKSKKTVASMIERKDDKDNKK--- 161
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIG-----AFDVSKLQKLRNKGGKKTDTVV 232
V+++E + N + N + I A V QKL N+ K V
Sbjct: 162 ---------QVKVQEVPKQDLVNNQINHNGEINEEILIANRVKLAQKLNNQKKK-----V 207
Query: 233 SKGSNPDPKKKITKKNRVWD---DSPPESKLDFT-DPAGGNGSNIEVEAADHGESMMDKE 288
K + P+K KK RVW+ + + L+ T D +G + + G+
Sbjct: 208 DKQKSQKPEKA-GKKPRVWELGGTTKDLATLERTKDKPEESGDYVAADTTLVGQMKGSIR 266
Query: 289 EVFSSDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLM 347
++ +E ++ ++ KP KKT SMF+S+ G +L D+ P L LKD L+
Sbjct: 267 DIEIESESEDESDQEIENPKPQVQKKTNSMFSMFKSLVGNKSLKHEDMAPVLDKLKDHLI 326
Query: 348 TKNVAA--------------------------------MEEALVRILTPRRSIDILRDVH 375
TKNVAA + +ALV+IL+P+R +DILRD
Sbjct: 327 TKNVAAEIAQKLCDSVGVKLEGKVLGTFDSVSSTVKATLTDALVQILSPKRRVDILRDAM 386
Query: 376 AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
AK +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH R
Sbjct: 387 EAKRNNRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHMR 446
Query: 436 RLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEP 482
L V ++EKGY KD A +A EAI+ A + DVVLVDTAGRMQDNEP
Sbjct: 447 HLNALHPPEKHGNMSMVQLYEKGYGKDAAGIAMEAIRFAKDSRFDVVLVDTAGRMQDNEP 506
Query: 483 LMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKF 542
LMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +IDGI+LTKF
Sbjct: 507 LMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADHSQSTNPHIIDGIVLTKF 566
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 567 DTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 613
>gi|380012384|ref|XP_003690264.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog [Apis florea]
Length = 619
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 256/654 (39%), Positives = 353/654 (53%), Gaps = 100/654 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ERSG SF YDS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERSGNHSFEYDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD---YSDFDEMFRQLR 117
+ NE LVFV YQ+IL L Y+D L + F + + + + +S+F+ F+
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYIDKFLNDIHLEFRDRFKNELENSKWFSNFE--FQSNY 113
Query: 118 KEAEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
+ A AE+ +++ ++ K M + + S ++ D +N +
Sbjct: 114 EHVLAMAEQWARTQAKIPKQMRTFDE----------SQKSKKTVASMIERKDDKENKKQV 163
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGS 236
K++ V ++ + N I + KL + N KK D
Sbjct: 164 KIQE-------VVKQDLQQNNRVNHNGEIDEEILIANRMKLAQKLNNQKKKVDKHYYFTE 216
Query: 237 NPDPKKKITKKNRVWD---------------DSPPESKLDFTDPAGGNGSNIEVEAADHG 281
+K KK RVW+ D P ES G I + G
Sbjct: 217 KAKKIEKAGKKPRVWELGGTIKDLAALERTKDKPEES-----------GDYIAADKTLVG 265
Query: 282 ESMMDKEEVFSSDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKADLEPALK 340
+ ++ +E +E +++KP KKT SMF+S+ G L D+ P L
Sbjct: 266 QMKGSIRDIIVESDSEDESDEEMENSKPQMQKKTNSMFSMFKSLVGNKCLKHEDMAPVLD 325
Query: 341 ALKDRLMTKNVAA--------------------------------MEEALVRILTPRRSI 368
LKD L++KNVAA + +ALV+IL+P+R +
Sbjct: 326 KLKDHLISKNVAADIAKKLCDSVGVKLEGKILGTFDSVTSTVKATLTDALVQILSPKRRV 385
Query: 369 DILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 428
DILRD AK +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVE
Sbjct: 386 DILRDAMEAKNNHRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVE 445
Query: 429 QLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
QLRTH R L V ++EKGY KD A +A EAI+ A + DVVLVDTAG
Sbjct: 446 QLRTHMRHLNALHPPEKHGNQSMVQLYEKGYGKDAAGIAMEAIRFAKDSKIDVVLVDTAG 505
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
RMQDNEPLMRAL+KLI +N PD+VLFVGEALVGN+AVDQL KFNQ LAD S S NP +ID
Sbjct: 506 RMQDNEPLMRALAKLIKVNEPDVVLFVGEALVGNEAVDQLVKFNQALADHSQSSNPHIID 565
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
GI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 566 GIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 619
>gi|348573887|ref|XP_003472722.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Cavia porcellus]
Length = 637
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 261/657 (39%), Positives = 362/657 (55%), Gaps = 89/657 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV 231
+G K E + + + +G+ G EN + K ++ K G+ D
Sbjct: 168 KKKGAKKEGSDGPLAASKAPAAEKSGLPVGPENGELSKEELIRRKREEFIQKHGRGMDKS 227
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NIEVEAADH 280
+ PK+K K RVW+ +K LD++ P NG+ N+ +
Sbjct: 228 SKSMKSDAPKEKGKKAPRVWELGGCANKEVLDYSAPTT-NGTPEAALSEDINL-IRGTGP 285
Query: 281 GESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKADLEP 337
G + D D S EDE ++ KP A K G M + + G +L + D+E
Sbjct: 286 GGQLQD------LDCSSSEDEGATPNSTKPRAPKGTLGGMFGMLKGLVGSKSLSREDMES 339
Query: 338 ALKALKDRLMTKNVAA--------------------------------MEEALVRILTPR 365
L ++D L+ KNVAA ++E+LV+IL P+
Sbjct: 340 VLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQ 399
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR+G
Sbjct: 400 RRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAG 459
Query: 426 AVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
AVEQLRTH RRL V +FEKGY KD A +A EAI A G DVVLVD
Sbjct: 460 AVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIACARNQGFDVVLVD 519
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S + P+
Sbjct: 520 TAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPR 579
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 580 LIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 636
>gi|149027816|gb|EDL83276.1| signal recognition particle receptor ('docking protein') [Rattus
norvegicus]
Length = 622
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 259/664 (39%), Positives = 361/664 (54%), Gaps = 118/664 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ +
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIE--------------------- 154
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
RG K + N ++ +G+ G EN + K ++ K
Sbjct: 155 ---------TRGEKTKEKAKNNKKKGSKKEEKSGLPVGPENGELSKEELIRRKREEFIQK 205
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------N 272
GK D + PK+K K RVW+ +K LD++ P NG+ N
Sbjct: 206 HGKGLDKSSKSTKSDIPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDIN 264
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANL 330
+ + G + D D S +DE ++ KP A K G M + + G +L
Sbjct: 265 L-IRGTGPGGQLQD------LDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSL 317
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 318 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 377
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 378 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 437
Query: 419 CDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 438 CDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 497
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 498 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 557
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 558 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 617
Query: 586 TLLK 589
L+K
Sbjct: 618 ALMK 621
>gi|195132635|ref|XP_002010748.1| GI21534 [Drosophila mojavensis]
gi|193907536|gb|EDW06403.1| GI21534 [Drosophila mojavensis]
Length = 636
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/669 (38%), Positives = 374/669 (55%), Gaps = 113/669 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW E G S I++LIR +LEER+ + + + A ++
Sbjct: 1 MLDFVVIFTKGGVVLWNSNESGKNY-ASCINSLIRGVILEERNTESKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTDYSDFDEMFR 114
+ NEL +V+ AV+Q+++ L Y+D LA M+ +F E + + DY +F++ FR
Sbjct: 57 FKLDNELDVVYAAVFQKVIKLNYLDSFLAEMQSAFQEKFSGIAAQERLAIDY-EFEQEFR 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
+ AE + + K+ + + N +K S ++ D+ + N
Sbjct: 116 TVLSAAEEASLKQGKAPKAMRSYNESQK-------------SKKTVASMIQDEKKATNTA 162
Query: 175 GRKLENGHSNVGNVEIEESRVTGVAN--GKENTSSNIGAFDVSKL-QKLRNKGGKKTDTV 231
++ V I+ES T + T+ +I + KL +KL +
Sbjct: 163 EKR----------VNIQESPPTSKSQPASPPRTTDDIIQENRRKLREKLTPTKKVSGEAR 212
Query: 232 VSKGSNPD-PKKKITKKNRVWD---------------DSPPESKL-----DFTDPAGGNG 270
+K S D ++K KK RVWD D+P + +L + G+
Sbjct: 213 PTKQSTVDKEREKAGKKPRVWDLGGNSKDAVLLDRSKDAPEDVQLQTINNELVGTMQGSI 272
Query: 271 SNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAK-----KTGWFSSMFQSIA 325
+++VE+ G D E S DSE EE ++ + + + K G S F+ I
Sbjct: 273 RDLDVESDTDG---ADSEA--SVDSELEEKQQKQRQTQQQQRNQRKAKGGGLLSYFKGIV 327
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G + DL+PAL+ ++D L++KNVA A
Sbjct: 328 GAKTMTLNDLQPALEKMRDHLISKNVASEIAAKLCDSVATSLEGKQMGTFDSIANMVKEA 387
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+ ++LVRIL+P+R IDI+RD +K +PY ++F GVNGVGKSTNLAK+ +WL+++ S
Sbjct: 388 LTQSLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFS 447
Query: 414 VMMAACDTFRSGAVEQLRTHAR-------------RLQVPIFEKGYEKDPAIVAKEAIQE 460
V++AACDTFR+GAVEQLRTH R R V ++EKGY KD A +A EAI+
Sbjct: 448 VLIAACDTFRAGAVEQLRTHTRHLNALHPAEKHKQRTMVQLYEKGYGKDAAGIAMEAIKY 507
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ
Sbjct: 508 AHDTKVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQ 567
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LAD SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV
Sbjct: 568 SLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINV 627
Query: 581 KSIVKTLLK 589
++V +L+K
Sbjct: 628 NAVVNSLMK 636
>gi|351698957|gb|EHB01876.1| Signal recognition particle receptor subunit alpha [Heterocephalus
glaber]
Length = 637
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 256/661 (38%), Positives = 365/661 (55%), Gaps = 97/661 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILSLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + +
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKSSKKKGAKKE 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+D V + + + + G EN + K ++ K
Sbjct: 176 GSD----------------GPVATSKAAPAEKSSLPVGPENGELSKEELIRRKREEFIQK 219
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHG 281
G+ D + PK+K K RVW+ +K LD++ P +N EAA
Sbjct: 220 HGRGMDKSSKSMKSDVPKEKGKKAPRVWELGGCANKEVLDYSTPT----TNGTPEAAVSE 275
Query: 282 ESMMDKE-----EVFSSDSESEEDEEVGKHN-KPDAKKT--GWFSSMFQSIAGKANLDKA 333
+ + + ++ D S +DE ++ KP A K+ G M + + G +L +
Sbjct: 276 DINLIRGTGPGGQLQDLDCSSSDDEGAAPNSAKPSATKSTLGGMFGMLKGLVGSKSLSRE 335
Query: 334 DLEPALKALKDRLMTKNVAA--------------------------------MEEALVRI 361
D+E L ++D L+ KNVAA ++E+LV+I
Sbjct: 336 DMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQI 395
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
L P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDT
Sbjct: 396 LQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDT 455
Query: 422 FRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
FR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G DV
Sbjct: 456 FRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDV 515
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S +
Sbjct: 516 VLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMA 575
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+
Sbjct: 576 QTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 635
Query: 589 K 589
K
Sbjct: 636 K 636
>gi|197101205|ref|NP_001125759.1| signal recognition particle receptor subunit alpha [Pongo abelii]
gi|55729093|emb|CAH91283.1| hypothetical protein [Pongo abelii]
Length = 638
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 264/667 (39%), Positives = 368/667 (55%), Gaps = 108/667 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY------------SD 108
+ N+ LVFV +Q+IL L YVD L+ + + F + Y RT+ SD
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY---RTEIQQQSALSLLNGTSD 112
Query: 109 FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDG 168
F F +L +EAE +S ++ P K + + K R + G +
Sbjct: 113 FQNDFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKA 164
Query: 169 DSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR------- 221
+ +G K E + + + +G+ G EN ++SK + +R
Sbjct: 165 KNSKKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFI 218
Query: 222 NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS-------- 271
K G+ + + PK+K K RVW+ +K LD++ P NG+
Sbjct: 219 QKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSED 277
Query: 272 -NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGK 327
N+ + G + D D S +DE +++ KP A K G M + + G
Sbjct: 278 INL-IRGTGPGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGS 330
Query: 328 ANLDKADLEPALKALKDRLMTKNVAA--------------------------------ME 355
+L + D+E L ++D L+ KNVAA ++
Sbjct: 331 KSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQ 390
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV+
Sbjct: 391 ESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVL 450
Query: 416 MAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEAT 462
+AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 451 IAACDTFRAGAVEQLRTHTRRLSALHPPEKQGGRTMVQLFEKGYGKDAAGIAMEAIAFAR 510
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L
Sbjct: 511 NQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRAL 570
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
AD S + P+LIDGI+LTKFDTIDDKVGAA+SM YV+ P++FVG GQ+Y DL+ LN K+
Sbjct: 571 ADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYVTSKPIVFVGTGQTYCDLRSLNAKA 630
Query: 583 IVKTLLK 589
+V L+K
Sbjct: 631 VVAALMK 637
>gi|388452476|ref|NP_001253675.1| signal recognition particle receptor subunit alpha [Macaca mulatta]
gi|402895742|ref|XP_003910976.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Papio anubis]
gi|380815902|gb|AFE79825.1| signal recognition particle receptor subunit alpha isoform 1
[Macaca mulatta]
gi|383421055|gb|AFH33741.1| signal recognition particle receptor subunit alpha isoform 1
[Macaca mulatta]
gi|384949000|gb|AFI38105.1| signal recognition particle receptor subunit alpha isoform 1
[Macaca mulatta]
Length = 638
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 262/664 (39%), Positives = 366/664 (55%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NGS N+
Sbjct: 222 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGSPEAALSEDINL 280
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 281 -IRGTGPGGQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|350396130|ref|XP_003484452.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog [Bombus impatiens]
Length = 613
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 258/656 (39%), Positives = 359/656 (54%), Gaps = 110/656 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ER+G +F YDS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERTGNHTFEYDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD---YSDFDEMFRQLR 117
+ NE LVFV YQ+IL L YVD L + F + + + + + +F+ F+
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNDIHLEFRDRFKNELENSKWFYNFE--FQNNY 113
Query: 118 KEAEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
+ A AE+ +++ ++ K M + + S ++ D DN +
Sbjct: 114 EHVLAMAEQWARTQAKIPKQMRTFDE----------SQKSKKTVASMIERKDDKDNKK-- 161
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGS 236
V+I+E ++N + N + G D L R K +K + K
Sbjct: 162 ----------QVKIQEVPKQDLSNNQVNHN---GEMDEEVLIANRMKLAQKMNNQKKKAD 208
Query: 237 NPDPKK--KITKKNRVWD---------------DSPPESKLDFTDPAGGNGSNIEVEAAD 279
+K K KK RVW+ D P ES D G + + +
Sbjct: 209 KQKSQKPEKAGKKPRVWELGGTIKDLAALERTKDKPEES----GDYVGADKTLV------ 258
Query: 280 HGESMMDKEEVFSSDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKADLEPA 338
G+ ++ +E +E ++ KP KK+ SMF+S+ G +L D+ P
Sbjct: 259 -GQMKGGIRDIVVETDSEDESDEEMENPKPQVQKKSNSMFSMFKSLVGNKSLKHEDMAPV 317
Query: 339 LKALKDRLMTKNVAA--------------------------------MEEALVRILTPRR 366
L+ LKD L++KNVAA + +ALV+IL+P+R
Sbjct: 318 LEKLKDHLISKNVAADIAQKLCDSVGVKLEGKVLGTFDSVTSTVKATLTDALVQILSPKR 377
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
+DILRD AK+ +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GA
Sbjct: 378 RVDILRDAMEAKKNNRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGA 437
Query: 427 VEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
VEQLRTH R L V ++EKGY KD A +A EAI+ A DVVLVDT
Sbjct: 438 VEQLRTHMRHLNALHPPEKHENQSMVQLYEKGYGKDAAGIAMEAIRFAKDLKIDVVLVDT 497
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +
Sbjct: 498 AGRMQDNEPLMRALTKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADHSQSTNPHI 557
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 558 IDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 613
>gi|301782169|ref|XP_002926499.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Ailuropoda melanoleuca]
gi|281338698|gb|EFB14282.1| hypothetical protein PANDA_016150 [Ailuropoda melanoleuca]
Length = 638
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/664 (39%), Positives = 359/664 (54%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ + + S + G
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGE-KPKEKAKNSKKKGAKK 174
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+ DG + E VG GV KE K ++ K
Sbjct: 175 ESSDGSLATSKAVPAEKSGLPVGPEH-------GVELSKEELIRR-------KREEFIQK 220
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE------- 274
G+ + + PK+K K RVW +K LD++ P +
Sbjct: 221 HGRGLEKSSKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSTPTTNGAPEVAPPEDINL 280
Query: 275 VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN--KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D + S D+EV N KP A K G M + + G +L
Sbjct: 281 IRGTGPGGQLQDLDC-------SSSDDEVTTQNATKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|403262391|ref|XP_003923574.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Saimiri boliviensis boliviensis]
Length = 638
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 261/664 (39%), Positives = 366/664 (55%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFRN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P +KK + R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAP-TTMKKYEDSEKAKKPARSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWD--DSPPESKLDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ S + LD++ P NG+ N+
Sbjct: 222 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGSANKEVLDYSTPTT-NGTPEAALSEDINL 280
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 281 -IRGTGPGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|296216603|ref|XP_002754616.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Callithrix jacchus]
Length = 637
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 263/667 (39%), Positives = 369/667 (55%), Gaps = 109/667 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFRN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKP-ARSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK-------- 223
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 224 --GGKKTDTVVSKGSNPDPKKKITKKNRVWD--DSPPESKLDFTDPAGGNGS-------- 271
G +K++ K + PK+K K RVW+ S + LD++ P NG+
Sbjct: 222 GRGMEKSN----KSKSDAPKEKGKKAPRVWELGGSANKEVLDYSTPTT-NGTPEAALSED 276
Query: 272 -NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGK 327
N+ + G + D D S +DE +++ KP A K G M + + G
Sbjct: 277 INL-IRGTGPGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGS 329
Query: 328 ANLDKADLEPALKALKDRLMTKNVAA--------------------------------ME 355
+L + D+E L ++D L+ KNVAA ++
Sbjct: 330 KSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQ 389
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV+
Sbjct: 390 ESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVL 449
Query: 416 MAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEAT 462
+AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 450 IAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFAR 509
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L
Sbjct: 510 NQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRAL 569
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
AD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K+
Sbjct: 570 ADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKA 629
Query: 583 IVKTLLK 589
+V L+K
Sbjct: 630 VVAALMK 636
>gi|291383611|ref|XP_002708642.1| PREDICTED: signal recognition particle receptor [Oryctolagus
cuniculus]
Length = 637
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/665 (39%), Positives = 364/665 (54%), Gaps = 105/665 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK-------- 223
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 224 --GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE----- 274
G +K+ SK + PK+K K RVW+ +K LD++ P
Sbjct: 222 GRGLEKS----SKSKSEAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGAPEAALSEDI 277
Query: 275 --VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKAN 329
+ G + D D S +DE +++ KP + K G M + + G +
Sbjct: 278 NLIRGTGPGGQLQD------LDCSSSDDEGAAQNSTKPSSTKGTLGGMFGMLKGLVGSKS 331
Query: 330 LDKADLEPALKALKDRLMTKNVAA--------------------------------MEEA 357
L + D+E L ++D L+ KNVAA ++E+
Sbjct: 332 LSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQES 391
Query: 358 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++A
Sbjct: 392 LVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIA 451
Query: 418 ACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRN 464
ACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 452 ACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQ 511
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 512 GFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALAD 571
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 572 HSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVV 631
Query: 585 KTLLK 589
L+K
Sbjct: 632 AALMK 636
>gi|23308697|ref|NP_003130.2| signal recognition particle receptor subunit alpha isoform 1 [Homo
sapiens]
gi|397498340|ref|XP_003819942.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Pan paniscus]
gi|20455516|sp|P08240.2|SRPR_HUMAN RecName: Full=Signal recognition particle receptor subunit alpha;
Short=SR-alpha; AltName: Full=Docking protein alpha;
Short=DP-alpha
gi|12654649|gb|AAH01162.1| Signal recognition particle receptor (docking protein) [Homo
sapiens]
gi|14318624|gb|AAH09110.1| Signal recognition particle receptor (docking protein) [Homo
sapiens]
gi|15488908|gb|AAH13583.1| Signal recognition particle receptor (docking protein) [Homo
sapiens]
gi|119588090|gb|EAW67686.1| signal recognition particle receptor ('docking protein'), isoform
CRA_b [Homo sapiens]
gi|123981146|gb|ABM82402.1| signal recognition particle receptor ('docking protein') [synthetic
construct]
gi|123995977|gb|ABM85590.1| signal recognition particle receptor ('docking protein') [synthetic
construct]
gi|168277846|dbj|BAG10901.1| signal recognition particle receptor subunit alpha [synthetic
construct]
gi|189065456|dbj|BAG35295.1| unnamed protein product [Homo sapiens]
gi|410228174|gb|JAA11306.1| signal recognition particle receptor (docking protein) [Pan
troglodytes]
gi|410299064|gb|JAA28132.1| signal recognition particle receptor (docking protein) [Pan
troglodytes]
gi|410353819|gb|JAA43513.1| signal recognition particle receptor (docking protein) [Pan
troglodytes]
Length = 638
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 261/664 (39%), Positives = 366/664 (55%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 222 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 280
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 281 -IRGTGSGGQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|417515930|gb|JAA53768.1| signal recognition particle receptor subunit alpha [Sus scrofa]
Length = 638
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/660 (39%), Positives = 365/660 (55%), Gaps = 94/660 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKSKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +GV G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKAVPTEKSGVPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAADHGE 282
G+ + + PK+K K RVW S + LD++ P +N EAA +
Sbjct: 222 GRGVEKSGKSTKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPT----TNGAPEAAPPED 277
Query: 283 SMMDKE-----EVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKAD 334
+ + ++ D S +DE +++ KP + K G M + + G +L + D
Sbjct: 278 INLIRGTGPGGQLQDLDCSSSDDEGATQNSTKPSSTKGTLGGMFGMLKGLVGSKSLSRED 337
Query: 335 LEPALKALKDRLMTKNVAA--------------------------------MEEALVRIL 362
+E L ++D L+ KNVAA ++E+LV+IL
Sbjct: 338 MESVLDKMRDHLIAKNVAADIAVQLCESVASKLEGKVMGTFSTVTSTVKQALQESLVQIL 397
Query: 363 TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTF 422
P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTF
Sbjct: 398 QPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTF 457
Query: 423 RSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
R+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G DVV
Sbjct: 458 RAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVV 517
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
LVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S +
Sbjct: 518 LVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQ 577
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 578 TPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637
>gi|158287925|ref|XP_309798.4| AGAP010894-PA [Anopheles gambiae str. PEST]
gi|157019422|gb|EAA05506.5| AGAP010894-PA [Anopheles gambiae str. PEST]
Length = 655
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 268/680 (39%), Positives = 362/680 (53%), Gaps = 116/680 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IFT+GG++LW C N L ++ LI+S +L+ERSG+ YD G +L+
Sbjct: 1 MLDLFTIFTKGGIVLW-CFRSTNQLFAPSVNALIKSVILQERSGV----YDHDG--LSLQ 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDY----------SDF 109
+ NE LVFV +Q+IL L Y+D L+ + F + Y + R D +DF
Sbjct: 54 YKLDNEFELVFVVAFQKILQLSYIDKFLSDVHLEFRDRYKNDLRVDNRNYGADFEFGADF 113
Query: 110 DEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDD-- 167
+ + K +A K+ + + K +++ G E+ +G GS
Sbjct: 114 RRILERAEKWGRQQATMPKQMRSYEDSAKSKKTVASMIERKGEEKPPAGAGSGSKKSVKI 173
Query: 168 -----------GDSDNM---RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFD 213
DSD M R + +G I ESR K +
Sbjct: 174 AEKKKAASELLADSDGMEAPRSPRSNGSPPELGEDLIMESRKKFAEKMKGGSGGGGKGSK 233
Query: 214 VSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD---------------DSPPES 258
+ K QK S S P+K K+ RVWD D P +
Sbjct: 234 LEK-QK-------------SPKSPQQPQK--GKQMRVWDLGGNTKDLPNLDRSKDRPEDV 277
Query: 259 KLDFT--DPAGGN--GSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT 314
K DFT D G+ G ++ E + E+ + E ++ + GK KP +
Sbjct: 278 KSDFTPNDQIIGSMRGGIRDLAVESDSEEDDEDEDEEEEEYEEQQQQRGGK--KPSSSSR 335
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------- 353
G SMF+ + G NL + D++PAL L+D L+ KNVA+
Sbjct: 336 GGMFSMFKGLVGSKNLTRDDMQPALDKLRDHLIGKNVASDIAQKLCDSVAGKLEGRVIGT 395
Query: 354 -----------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
+ EALV+IL+P+R +DILRD AK +P+V+ F GVNGVGKSTNLAK
Sbjct: 396 FDTIATTVRNTLTEALVQILSPKRRVDILRDCLEAKRAGRPFVMSFCGVNGVGKSTNLAK 455
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKD 449
+ +WL+++ +SV++AACDTFR+GAVEQLRTH R L V ++EKGY KD
Sbjct: 456 ICFWLIENNLSVLIAACDTFRAGAVEQLRTHMRHLNALHPAERHGGRSMVQLYEKGYGKD 515
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A +A EAI+ A + DVVL+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN
Sbjct: 516 AAGIAMEAIRYANDSKIDVVLIDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGN 575
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
+AVDQL KFNQ LAD SSS P +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG G
Sbjct: 576 EAVDQLVKFNQALADYSSSERPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTG 635
Query: 570 QSYTDLKKLNVKSIVKTLLK 589
Q+YTDLK LN K++V L+K
Sbjct: 636 QTYTDLKALNAKAVVHALMK 655
>gi|355567208|gb|EHH23587.1| hypothetical protein EGK_07075 [Macaca mulatta]
gi|355752783|gb|EHH56903.1| hypothetical protein EGM_06398 [Macaca fascicularis]
Length = 640
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/667 (38%), Positives = 368/667 (55%), Gaps = 106/667 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNL-KKQGGQLQKGGFERGSNRSGGG 162
F +L +EAE ++ + + S++ KP+ ++ + +G + ++ +
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKE 175
Query: 163 SANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRN 222
DG + E VG NG E + + + +
Sbjct: 176 GEGSDGPLATSKAVPAEKSGLPVGP-----------ENGVELSKEELIRRKREEFIQKHG 224
Query: 223 KGGKKTDTVVSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS-------- 271
+G +K++ K + D PK+K K RVW+ +K LD++ P NGS
Sbjct: 225 RGMEKSN----KSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGSPEAALSED 279
Query: 272 -NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGK 327
N+ + G + D D S +DE +++ KP A K G M + + G
Sbjct: 280 INL-IRGTGPGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGS 332
Query: 328 ANLDKADLEPALKALKDRLMTKNVAA--------------------------------ME 355
+L + D+E L ++D L+ KNVAA ++
Sbjct: 333 KSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQ 392
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV+
Sbjct: 393 ESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVL 452
Query: 416 MAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEAT 462
+AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 453 IAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFAR 512
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L
Sbjct: 513 NQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRAL 572
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
AD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K+
Sbjct: 573 ADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKA 632
Query: 583 IVKTLLK 589
+V L+K
Sbjct: 633 VVAALMK 639
>gi|48146167|emb|CAG33306.1| SRPR [Homo sapiens]
Length = 638
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 261/664 (39%), Positives = 366/664 (55%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 222 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 280
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 281 -IRGTGSGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLWESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|426371003|ref|XP_004052445.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Gorilla gorilla gorilla]
Length = 638
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 261/664 (39%), Positives = 366/664 (55%), Gaps = 102/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 116 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 167
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 168 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 221
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 222 GRGMEKSNKSMKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 280
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 281 -IRGTGSGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 333
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 334 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 393
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 394 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 453
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 454 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 513
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 514 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 573
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 574 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 633
Query: 586 TLLK 589
L+K
Sbjct: 634 ALMK 637
>gi|340719159|ref|XP_003398024.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
receptor subunit alpha homolog [Bombus terrestris]
Length = 627
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 259/660 (39%), Positives = 365/660 (55%), Gaps = 104/660 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ER+G +F YDS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERTGNHTFEYDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD---YSDFDEMFRQLR 117
+ NE LVFV YQ+IL L YVD L + F + + + + + +F+ F+
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNDIHLEFRDRFKNELENSKWFYNFE--FQNNY 113
Query: 118 KEAEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
+ A AE+ +++ ++ K M + + S ++ D DN +
Sbjct: 114 EHVLAMAEQWARTQAKIPKQMRTFDE----------SQKSKKTIASMIERKDDKDNKKQG 163
Query: 177 KLENG-HSNVGN-VEIEESRVTGVANGKENTS----SNIGAFDVSKLQKLRNKGGKKTDT 230
K + G ++N + ++I+E ++N + N + + + KL + N KK D
Sbjct: 164 KRKTGVNTNRDDQMKIQEVPKQDLSNNQVNHNGEMDEEVLIANRMKLAQKMNNQKKKVDK 223
Query: 231 VVSKGSNPDPKKKITKKNRVWD---------------DSPPESKLDFTDPAGGNGSNIEV 275
K P+ K KK RVW+ D P ES D G + + +
Sbjct: 224 --QKSQKPE---KAGKKPRVWELGGTIKDLAALERTKDKPEES----GDYVGADKTLV-- 272
Query: 276 EAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKAD 334
G+ ++ +E +E ++ KP KK+ SMF+S+ +L D
Sbjct: 273 -----GQMKGGIRDIVVESDSEDESDEEMENPKPQVQKKSNSMFSMFKSLVSNKSLKHED 327
Query: 335 LEPALKALKDRLMTKNVAA--------------------------------MEEALVRIL 362
+ P L+ LKD L++KNVAA + +ALV+IL
Sbjct: 328 MAPVLEKLKDHLISKNVAADIAQKLCDSVGVKLEGKVLGTFDSVTSTVKATLTDALVQIL 387
Query: 363 TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTF 422
+P+R +DILRD AK +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTF
Sbjct: 388 SPKRRVDILRDAMEAKXNNRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTF 447
Query: 423 RSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
R+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A DVV
Sbjct: 448 RAGAVEQLRTHMRHLNALHPPEKHENQSMVQLYEKGYGKDAAGIAMEAIRFAKDLKIDVV 507
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
LVDTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S
Sbjct: 508 LVDTAGRMQDNEPLMRALTKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADHSQST 567
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 568 NPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 627
>gi|125983470|ref|XP_001355500.1| GA15385 [Drosophila pseudoobscura pseudoobscura]
gi|54643816|gb|EAL32559.1| GA15385 [Drosophila pseudoobscura pseudoobscura]
Length = 621
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 257/662 (38%), Positives = 362/662 (54%), Gaps = 114/662 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW + G S I++LIR +LE+R+ + + + A ++
Sbjct: 1 MLDFVVIFTKGGVVLWNSQTSGINF-SSCINSLIRGVILEDRNTESKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTDYSDFDEMFR 114
+ NEL LV+ AV+Q+++ L Y+D LA M+ +F E + + ++Y DFD FR
Sbjct: 57 FKLDNELDLVYAAVFQKVIKLNYLDAFLADMQFAFKEKFGSIPALERLGSEY-DFDGEFR 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
+ AE + + K+ + + N +K S ++ DD R
Sbjct: 116 SVLSAAEEASSKQVKAPKAMRSYNESQK-------------SKKTIASMIQDDKKPVEKR 162
Query: 175 GRKLENGHSNVGNVEIEES--RVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVV 232
V I+ES + + T +I + KL++ K DT
Sbjct: 163 -------------VNIQESPTQPKSQPSSPPLTKQDIIQENRRKLREKLTPTKKAADT-- 207
Query: 233 SKGSNPDPKKKITKKNRVWD---------------DSPPESKL-----DFTDPAGGNGSN 272
+ +K KK RVWD DSP + + + G +
Sbjct: 208 KSAAKQGASEKAGKKPRVWDLGGNSKDAVLLDRSKDSPEDVQYQSISNELVGTMQGVIPD 267
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDK 332
++VE+ E+ +D EE S + K NK + G S F+ I G +
Sbjct: 268 LDVES----ENDVDSEETSSEEDNVSSQSPALKKNK----RGGGLVSYFRGIVGGKIMSL 319
Query: 333 ADLEPALKALKDRLMTKNVA--------------------------------AMEEALVR 360
ADL+PAL+ ++D L++KNVA A+ ++LVR
Sbjct: 320 ADLQPALEKMRDHLISKNVASEIAVKLCDSVATSLEGKQVGTFDSVASLVKEALTQSLVR 379
Query: 361 ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACD 420
IL+P+R IDI+RD K KPY ++F GVNGVGKSTNLAK+ +WL+++ +V++AACD
Sbjct: 380 ILSPKRRIDIIRDALECKRNGKPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACD 439
Query: 421 TFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
TFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A D
Sbjct: 440 TFRAGAVEQLRTHTRHLNALHPPANHNNRTMVQLYEKGYGKDAAGIAMEAIKFAHETKVD 499
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD SS
Sbjct: 500 VVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSS 559
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +L
Sbjct: 560 NENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSL 619
Query: 588 LK 589
+K
Sbjct: 620 MK 621
>gi|30866|emb|CAA29608.1| unnamed protein product [Homo sapiens]
Length = 638
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 264/667 (39%), Positives = 371/667 (55%), Gaps = 108/667 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDRLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ + + S + G
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGE-KPKEKAKNSKKKGAKK 174
Query: 164 ANDDGDSDNMRGRKLENGHSNVG-NVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRN 222
DG + E VG E+E S+ + +E +QK
Sbjct: 175 EGSDGPLATSKPVPAEKSGLPVGPENEVELSKEELIRRKREEF-----------IQK-HG 222
Query: 223 KGGKKTDTVVSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS-------- 271
+G +K++ K + D PK+K K RVW+ +K LD++ P NG+
Sbjct: 223 RGMEKSN----KSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSED 277
Query: 272 -NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKH-NKPDAKK--TGWFSSMFQSIAGK 327
N+ + G + D D S +DE + KP A K G M + + G
Sbjct: 278 INL-IRGTGSGGQLQD------LDCSSSDDEGAAQTLTKPSATKGTLGGMFGMLKGLVGS 330
Query: 328 ANLDKADLEPALKALKDRLMTKNVAA--------------------------------ME 355
+L + D+E L ++D L+ KNVAA ++
Sbjct: 331 KSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQ 390
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV+
Sbjct: 391 ESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVL 450
Query: 416 MAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEAT 462
+AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 451 IAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFAR 510
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L
Sbjct: 511 NQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRAL 570
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
AD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K+
Sbjct: 571 ADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKA 630
Query: 583 IVKTLLK 589
+V L+K
Sbjct: 631 VVAALMK 637
>gi|134891|sp|P06625.2|SRPR_CANFA RecName: Full=Signal recognition particle receptor subunit alpha;
Short=SR-alpha; AltName: Full=Docking protein alpha;
Short=DP-alpha
gi|997|emb|CAA26945.1| signal recognition particle receptor [Canis sp.]
gi|224778|prf||1112224A signal recognition particle receptor
Length = 638
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 257/670 (38%), Positives = 366/670 (54%), Gaps = 114/670 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS------------- 107
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 108 DFDEMFRQLRKEAEARA----EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
DF + R+ + ++ RA ++ + S++ KP+ ++ + G+ K + +
Sbjct: 116 DFLRLLREREESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKE 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-- 221
++D L G + V E+S G+ G EN ++SK + +R
Sbjct: 176 SSDG---------PLATGKA----VPAEKS---GLPAGPEN------GVELSKEELIRRK 213
Query: 222 -----NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE 274
K G+ + + PK+K K RVW +K LD++ P +
Sbjct: 214 REEFIQKHGRGLEKSSKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTTNGAPDAA 273
Query: 275 -------VEAADHGESMMDKEEVFSSDSESEEDEEVGKH-NKPDAKK--TGWFSSMFQSI 324
+ G + D D S +DEE ++ +KP A K G M + +
Sbjct: 274 PPEDINLIRGTGPGGQLQD------LDCSSSDDEETAQNASKPSATKGTLGGMFGMLKGL 327
Query: 325 AGKANLDKADLEPALKALKDRLMTKNVAA------------------------------- 353
G +L + D+E L ++D L+ KNVAA
Sbjct: 328 VGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQ 387
Query: 354 -MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++
Sbjct: 388 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 447
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVE +RTH RRL V +FEKGY KD A +A EAI
Sbjct: 448 SVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIA 507
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 508 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 567
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 568 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 627
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 628 AKAVVAALMK 637
>gi|196016166|ref|XP_002117937.1| hypothetical protein TRIADDRAFT_33282 [Trichoplax adhaerens]
gi|190579510|gb|EDV19604.1| hypothetical protein TRIADDRAFT_33282 [Trichoplax adhaerens]
Length = 614
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/654 (37%), Positives = 358/654 (54%), Gaps = 106/654 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IFT+ G++LW + + ++ P++ LIR +L+ER+G ++F +DS L+
Sbjct: 1 MLDLFTIFTKSGIVLWCFQGIQHSFT-EPVNALIRDVILQERTGKSTFTHDS----LELQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS----DFDEMFRQL 116
+ NE LVFV YQ+I+ LLY+D L++ + +F + Y + + + DFD ++ +
Sbjct: 56 YKLDNEFELVFVVAYQKIVQLLYIDKLISDVHLAFRDKYKDRLSTGTYRKFDFDVEYQTI 115
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
K EE K + K M K+ +K S + + N+ D+ + G
Sbjct: 116 LKSV---IEEHKVKQAQPKKMRTFKES----EKSRKTIASLKVDQKNNNESNDAPVLEGT 168
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGS 236
L R T +AN + S+ + A S T+
Sbjct: 169 SLH-------------YRFT-IANNSSSGSNGVVAESASP-------------TIPQVAR 201
Query: 237 NPDPKKKITKK-NRVWDD---SPPESKLDFT-DPAGGNGSNIEVEAADHGESMMDKEEVF 291
N P+ K KK +RVW + + + +LD++ + A G+ N + + G +M + + F
Sbjct: 202 NVSPRAKPHKKADRVWSNGGSTRDQVELDYSSNTASGDNVNANKDKSFVG-TMKGQLKTF 260
Query: 292 SSDSESE------------EDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPAL 339
E + P ++TG S F+++ G+ + K + P L
Sbjct: 261 EEVEEQSASEESSEEEEEINNATNSSQPAPKKQQTGLLS-FFKTLTGQKIITKEGMVPIL 319
Query: 340 KALKDRLMTKNVAA--------------------------------MEEALVRILTPRRS 367
+ +K+ L+ KNVAA + E+L ++L+PRR
Sbjct: 320 EKMKEHLIAKNVAADIADQLCSSVSTKLEGKVIGTFGGITSEVKKTLAESLTQLLSPRRQ 379
Query: 368 IDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 427
IDILRD AK ++KPY + F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAV
Sbjct: 380 IDILRDCMEAKRRQKPYSITFCGVNGVGKSTNLAKICFWLMENGYRVLIAACDTFRAGAV 439
Query: 428 EQLRTHARRLQ------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
EQLRTH R L V +FEKGY KD A +A +AI A DVVL+DTAG
Sbjct: 440 EQLRTHVRHLNALHPAEGDEEPSVILFEKGYGKDAAGIAMDAINFAQDRIIDVVLIDTAG 499
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
RMQDNEPLMR+L+KL+++N PDLVLFVGEALVGN+AVDQL KFN + D S S NP+LID
Sbjct: 500 RMQDNEPLMRSLAKLVHINEPDLVLFVGEALVGNEAVDQLKKFNHAMMDFSKSDNPRLID 559
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
GILLTKFDTIDDKVGAA+SM Y +G P++FVG GQ+Y DLK+LNV+ +V +LLK
Sbjct: 560 GILLTKFDTIDDKVGAAISMTYTAGQPIVFVGTGQTYADLKRLNVQIVVNSLLK 613
>gi|403349553|gb|EJY74215.1| SRP54-type protein, GTPase domain containing protein [Oxytricha
trifallax]
Length = 589
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/644 (38%), Positives = 355/644 (55%), Gaps = 112/644 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M + + IFT GG++LW CK +K ++ I+ LLEE+S FN+ A + LK
Sbjct: 1 MFDFVCIFTTGGVVLW-CKAF-QEMKLDLLNIFIQRILLEEKSNNTQFNF----AEFVLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF-SEIYDPKRTD---YSD----FDEM 112
W N+L LVF +Y+ IL L +V+DLL +++ F ++IY + Y D FD
Sbjct: 55 WKVQNDLNLVFAIIYKEILQLQFVEDLLDLVRYEFVTKIYPQIQKQGEVYLDLPTNFDGH 114
Query: 113 FRQLRKEAEARAEELKKSKQV-----TKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDD 167
F+ L K E + +EL+ KQ+ T LK++ G + K F R S + +
Sbjct: 115 FQVLWKRWEQKTKELEGPKQMKRFDQTSKAKKLKEKSGIINKNDFSRSSTNEAREALKN- 173
Query: 168 GDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKK 227
K H+ + E + T G E+T K N GGK+
Sbjct: 174 ---------KFNKSHT------VTERKSTSTILGSEST-------------KAVNSGGKE 205
Query: 228 TDTVVSKGSNPDPKKKITKKNRVW---DDSPPESKLDFTDPAGGNGSNIEVEAADHGESM 284
R W D +L+ D + G I+++
Sbjct: 206 M--------------------RNWMGVSDKVSAKQLEQIDVSLNKGGEIDIDRQKEIYLG 245
Query: 285 MDKEEV---FSSDSESEEDEEVGKHNKPDAKKTGWFSSM---FQSIAGKANLDKADLEPA 338
D +E+ ++SD E + E + NK + G FS + FQ+I G L + D+EP
Sbjct: 246 GDDDELEGFYNSDDEIDF-ENFKRGNKGQKQGGGLFSKLTNAFQNITGNKTLSEEDVEPI 304
Query: 339 LKALKDRLMTKNVA--------------------------------AMEEALVRILTPRR 366
LK+ D L+ KNVA A+ +++ ++LTP+R
Sbjct: 305 LKSFSDALIEKNVASEIAEALCKSVANTLVDKRTESFTTVKATVKQALIDSITKLLTPKR 364
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSG 425
+IDIL+D +AK++ + Y +VF+GVNGVGKST+LAKVAY+L + + VMMA CD FRSG
Sbjct: 365 NIDILKDALSAKQKGQVYSLVFIGVNGVGKSTSLAKVAYYLKTKGNLKVMMAGCDNFRSG 424
Query: 426 AVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
A+EQL+TH L PI+EKGY+ DPAI+AKEA+QEA G DVVL+DTAGRMQ NE LMR
Sbjct: 425 AIEQLKTHCLCLDCPIYEKGYKDDPAIIAKEALQEAKTKGYDVVLIDTAGRMQGNEKLMR 484
Query: 486 ALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS-SSPNPQLIDGILLTKFDT 544
L+KL+++NNPD+VLFVGEALVGNDA+DQL+KFNQ L D + NP+ IDGI++TKFDT
Sbjct: 485 QLAKLVHINNPDVVLFVGEALVGNDAIDQLTKFNQSLIDYAVQDTNPRTIDGIIMTKFDT 544
Query: 545 IDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+D+KVG AL+MVY +G P++FVG GQ Y LKKLNV++++ L+
Sbjct: 545 VDEKVGTALNMVYTTGKPIVFVGIGQKYPHLKKLNVQTVIGALM 588
>gi|86129464|ref|NP_001034366.1| signal recognition particle receptor subunit alpha [Gallus gallus]
gi|60099127|emb|CAH65394.1| hypothetical protein RCJMB04_28a6 [Gallus gallus]
Length = 644
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 267/668 (39%), Positives = 373/668 (55%), Gaps = 104/668 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGS--PIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GGL+LW + + + P++ LIRS LL+ER G SF ++ A T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVRGPASAATAPVNALIRSVLLQERGGNNSFTHE----ALT 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS----------- 107
LK+ N+ LVFV +Q+IL L YVD L+ + + F + Y R ++
Sbjct: 57 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKY---RNEFQQKGALGILNGT 113
Query: 108 -DFDEMFRQLRKEAE----ARAEELKKS-KQVTKPMNNLK---KQGGQLQKGGFERGSNR 158
DF + F +L +EAE RA + K+ +Q K +K + G+ K + N+
Sbjct: 114 FDFKDDFLRLLREAEESSKVRAPTVMKTFEQSVKSQKTVKCMIETRGEKPKEKVKNKKNK 173
Query: 159 SGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
N+ + N K G E + + + +E T I + +
Sbjct: 174 GSKKEGNEAVTASN----KTAPG----------EKQSSAAGDKEELTKDEILQKNREEFF 219
Query: 219 KLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVE 276
K K G+K+ SK PD +K+ KK RVWD +K LD+++ GN +E
Sbjct: 220 KRHMKAGEKS----SKSPKPDAQKEKGKKPRVWDLGNSNAKVLDYSNSTTNGNSEASPME 275
Query: 277 AADHGESMMDKEE--------VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMF--QSIAG 326
D ++ D+ + SD E+EE++ + +KP KK G + + G
Sbjct: 276 DFDPDMALRDRNREPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKGGLGGMFGMLKGLVG 335
Query: 327 KANLDKADLEPALKALKDRLMTKNVAA--------------------------------M 354
+L + +++P L+ +KD L+ KNVAA +
Sbjct: 336 SKSLTRQNMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQAL 395
Query: 355 EEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSV 414
+EALV+IL P+R +D+LRDV A+ R+PYVV F GVNGVGKSTNLAK+++WL+++ SV
Sbjct: 396 QEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGFSV 455
Query: 415 MMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEA 461
++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EAI A
Sbjct: 456 LIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAISYA 515
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+
Sbjct: 516 RNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFNKA 575
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVK 581
LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K
Sbjct: 576 LADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAK 635
Query: 582 SIVKTLLK 589
++V L+K
Sbjct: 636 AVVAALMK 643
>gi|384249958|gb|EIE23438.1| SRP54-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 580
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/300 (65%), Positives = 233/300 (77%), Gaps = 33/300 (11%)
Query: 323 SIAGKANLDKADLEPALKALKDRLMTKNVA------------------------------ 352
S+ G A L + D+ PAL+ LK +LM +NVA
Sbjct: 281 SVVGTAALTREDIVPALQGLKKKLMERNVAEGIAEKVVESVAANLEGQRLGSFTRVSSAV 340
Query: 353 --AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
A+E+AL RILTPRRSIDILRD+ AK + KPY +VFVGVNGVGKSTNLAK+AYWLLQ+
Sbjct: 341 RAAVEQALHRILTPRRSIDILRDIALAKARGKPYTIVFVGVNGVGKSTNLAKIAYWLLQN 400
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+VSVM+AACDTFRSGAVEQL+TH RL VP++E+GYEKDPA VA EA + A R+ DV+L
Sbjct: 401 EVSVMIAACDTFRSGAVEQLKTHCARLGVPLYERGYEKDPAKVAYEAQRAAERSHKDVLL 460
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS-SP 529
VDTAGRMQDNEPLMRALS LI +N+PDLVLFVGEALVGNDAVDQL+KFNQ+L+DL++ +
Sbjct: 461 VDTAGRMQDNEPLMRALSNLITVNSPDLVLFVGEALVGNDAVDQLTKFNQRLSDLATDAA 520
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDGILLTKFDTIDDKVGAALSMVY SGAP+MFVGCGQ+Y DLK+LNVKS+V++LLK
Sbjct: 521 TAHTIDGILLTKFDTIDDKVGAALSMVYTSGAPIMFVGCGQTYVDLKRLNVKSVVRSLLK 580
>gi|321473979|gb|EFX84945.1| hypothetical protein DAPPUDRAFT_300824 [Daphnia pulex]
Length = 621
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/661 (37%), Positives = 354/661 (53%), Gaps = 112/661 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + S ++ LI++ +L+ER+G S+++D+ TLK
Sbjct: 1 MLDFFSIFSKGGIVLW-CFQGTSQIFTSSVNALIKAVILQERTGQLSYDHDNV----TLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY--DPKRTDYS---DFDEMFRQ 115
+ NE LV+V YQ+IL L YVD L + F + Y + + + + +EMF
Sbjct: 56 YKLDNEFELVYVVAYQKILQLSYVDKFLNDIHLEFRDAYKNELQLQQFGGKFEINEMFNS 115
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
+ K AE Q P + K + QK S G ++ +
Sbjct: 116 ILKSAEDWGR-----LQAAAP--KMMKSFEESQKSKKTVASMIERKGDDKENKKVKKVEI 168
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG 235
+ E + N+E+ E + + + + + A G K+ K
Sbjct: 169 KVPEVKPEIIQNIELSEEDI--IQQKRREFAEKMAA------------GKNKSKPPTEKL 214
Query: 236 SNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEV----EAADHGESMMDKEEVF 291
+P K +K++RVW P GG ++E + D GES + ++
Sbjct: 215 KSPKATSKKSKESRVW-------------PLGGAPKDMETLDYTKDKDIGESPLPQQASV 261
Query: 292 SSDSESEED------------------EEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKA 333
+ D + V K K+TG FS +F+++ G + +
Sbjct: 262 GTLQGEVRDMDFESESEEEEQQEEGTTDYVPKQVTQQKKQTGIFS-LFKNLVGSKTITEE 320
Query: 334 DLEPALKALKDRLMTKNVAA--------------------------------MEEALVRI 361
+ P L ++D L+ KNVA+ + E+LV+I
Sbjct: 321 VMTPVLDKMRDHLIAKNVASEIAGKLCDSVAAKLNGKVLGTFESLANTVKASLTESLVQI 380
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
L+PRR +DILRDV ++ Q +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDT
Sbjct: 381 LSPRRRVDILRDVFESQRQNRPYVMSFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDT 440
Query: 422 FRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
FR+GAVEQLRTH R L V ++EKGY KD A +A EAI A G DV
Sbjct: 441 FRAGAVEQLRTHMRHLNSIHPPEKHGGRQMVQLYEKGYGKDAAGIALEAINYARDGGIDV 500
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S+S
Sbjct: 501 VMIDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSNS 560
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
NP IDGI+LTKFDTIDDKVGAA+SM Y++G P++F+G GQ+Y DLK LNVK++V L+
Sbjct: 561 ENPHTIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFIGTGQTYADLKTLNVKAVVSILM 620
Query: 589 K 589
K
Sbjct: 621 K 621
>gi|332372748|gb|AEE61516.1| unknown [Dendroctonus ponderosae]
Length = 623
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 265/660 (40%), Positives = 369/660 (55%), Gaps = 108/660 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + S ++ LI++ +L+ER + Y+ G L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSHILTSSVNALIQNVILQERP---TNTYEDNG--LLLQ 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEM-FRQLRKE 119
+ NE LVFVA YQ+IL L YVD L ++ F + Y + D F + F Q K
Sbjct: 55 YKLDNEFDLVFVAAYQKILQLSYVDKFLNDIQLEFRDKYKNELADKRYFQGLDFSQTFKS 114
Query: 120 AEARAEELKKSK-QVTKPMNNL-------KKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
R+E KS+ ++ K M K +++ G E+ + + N ++
Sbjct: 115 VLQRSEAWGKSQSKLPKQMRTFDESDKSKKTVSSMIERKGEEKPTKKDKKKEVNFASENA 174
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV 231
L+ + G ++ + ++N F QK+ K KK D
Sbjct: 175 VQASPALDQPQN--GTID-------------DTLAANRAKF----AQKMAQK--KKGDIK 213
Query: 232 VSKGSNPDPKKKITKKNRVWD---------------DSPPESKLDFTDPAGGNGSNIEVE 276
S S P ++K +KK RVWD D P ++K FT + E
Sbjct: 214 KSPKS-PKAQEKASKKPRVWDLGGTSKDLESLERTVDRPEDAKSHFTP---------DTE 263
Query: 277 AADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT--GWFSSMFQSIAGKANLDKAD 334
+ + EV SSD E EEDE +P++KK G S+F+ + G NL AD
Sbjct: 264 MVGQMQGSIKDLEVESSDEEFEEDENEYVLEQPESKKPAKGGMFSIFKGLVGSKNLTLAD 323
Query: 335 LEPALKALKDRLMTKNVAA--------------------------------MEEALVRIL 362
+ PAL+ +KD L+ KNVA+ + ++LV+IL
Sbjct: 324 VNPALEKMKDHLIAKNVASDIAIKLCDSVAAKLEGKVLGTFDSVATIVKNTLTDSLVQIL 383
Query: 363 TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTF 422
+P R +DILRD AK+ R+P+V+ F GVNGVGKSTNL+K+ +WL+++ + V++AACDTF
Sbjct: 384 SPNRRVDILRDCLEAKKNRRPFVMSFCGVNGVGKSTNLSKICFWLIENDLQVLIAACDTF 443
Query: 423 RSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
R+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A DVV
Sbjct: 444 RAGAVEQLRTHMRHLNALHPPDRHGGKQMVQLYEKGYGKDAAGIAMEAIKFARDTKVDVV 503
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S++
Sbjct: 504 LIDTAGRMQDNEPLMRALTKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSANT 563
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
NP LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LNVK++V +L+K
Sbjct: 564 NPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKALNVKAVVHSLMK 623
>gi|327282058|ref|XP_003225761.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Anolis carolinensis]
Length = 649
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 257/665 (38%), Positives = 365/665 (54%), Gaps = 93/665 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGN--ALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GGL+LW + + A +P++ LIRS LL+ER G SF ++ A T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVRGPAAACTAPVNALIRSVLLQERGGNNSFTHE----ALT 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS----------- 107
LK+ N+ LVFV +Q+IL L YVD L+ + + F + Y R ++
Sbjct: 57 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKY---RNEFQQKGTLGILNGT 113
Query: 108 -DFDEMFRQLRKEAEARAE-----ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGG 161
DF E F L ++AE ++ +K +Q K +K ++ G +
Sbjct: 114 FDFKEDFLHLLRDAEESSKVRAPTAMKTFEQSAKSQKTVK---SMIENRGEKPKEKTKNK 170
Query: 162 GSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR 221
+ + ++M + + V +V+ E + G + +E T I + + + R
Sbjct: 171 KNKGSKKEGESML-QLIVATPKTVPSVKQEPAAAAG--DREELTKDEILQRNREEFFRKR 227
Query: 222 NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTD-PAGGNGSNIEVEAAD 279
K G+K++ K PD +K KK RVWD +K LD+++ + GN +E D
Sbjct: 228 MKVGEKSN----KSPKPDAQKDKGKKPRVWDLGNSNAKVLDYSNSTSNGNADTCPMEDFD 283
Query: 280 HGESMMDKEE----------VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKAN 329
+ D+ + E E+ + G M + + G +
Sbjct: 284 AEMLVSDRNHEPGLLREIECESEEEMEEEKVVQSSSSTSAKKGGLGGMFGMLKGLVGSKS 343
Query: 330 LDKADLEPALKALKDRLMTKNVAA--------------------------------MEEA 357
L K D++P L+ +KD L+ KNVAA ++E+
Sbjct: 344 LAKEDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQES 403
Query: 358 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
LV+IL P+R +D+LRDV A+ R+PYV+ F GVNGVGKSTNLAK+++WL+++ SV++A
Sbjct: 404 LVQILQPQRRVDVLRDVMDAQRHRRPYVITFCGVNGVGKSTNLAKISFWLIENGFSVLIA 463
Query: 418 ACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRN 464
ACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EAI A
Sbjct: 464 ACDTFRAGAVEQLRTHTRRLNALHPPENHSGRVMVQLYEKGYGKDAAGIAMEAILYARNQ 523
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 524 GFDVVLVDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNKALAD 583
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 584 HSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVV 643
Query: 585 KTLLK 589
L+K
Sbjct: 644 AALMK 648
>gi|432893934|ref|XP_004075925.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 1 [Oryzias latipes]
Length = 643
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 260/672 (38%), Positives = 371/672 (55%), Gaps = 113/672 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGS---PIDTLIRSCLLEERSGLASFNYDSAGAAY 57
ML+ IF++GG++LW + G +K S P++ LIRS +L+ERSG SF ++
Sbjct: 1 MLDFFTIFSKGGIVLWCFQ--GAGVKESFTGPVNALIRSVILQERSGSNSFTHERQ---- 54
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT---------DYSD 108
+LK+ NE L+FV +Q IL L YVD + ++ F + Y + + +
Sbjct: 55 SLKYKLDNEFELIFVVGFQNILTLTYVDKFIDDVQLRFRDRYKNELVQKGALMLLNNSFE 114
Query: 109 FDEMFRQLRKEAEARA-----------EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSN 157
F++ F+++ +EAE + +E +KSK+ K M ++ +GG ++G
Sbjct: 115 FEDDFQRILREAEETSRTRSTTYMRAFQESEKSKKTVKSM--IETKGG-------DKGKE 165
Query: 158 RSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL 217
+ G S + + K+E V NG N G +
Sbjct: 166 QGGKKSKSSKKEPPAPEPAKVEKPSPPAQK---------AVQNG------NQGLTPEEII 210
Query: 218 QKLRNKGGKK-TDTVVSKGS-NPDPKKKITKKNRVWDDSPPESK-LDFT----DPAGGNG 270
QK R + +K T K S +P P+K K RVWD+ +K LD++ D G N
Sbjct: 211 QKKREEFIRKHTAGPTEKPSKSPKPQKPRGKTKRVWDNGGTNTKELDYSAKNGDSPGVND 270
Query: 271 SNIEV-------EAADHGESM-MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQ 322
+++ +++ G+ + +D E + E E K + G M +
Sbjct: 271 KDLDAHNDLGIQQSSMKGDLLPVDYESSEEEEVEEVVVNEASKPSSKKGGGFGGMFGMLK 330
Query: 323 SIAGKANLDKADLEPALKALKDRLMTKNVAA----------------------------- 353
+ G +L + D+EP L+ +K+ L+ KNVAA
Sbjct: 331 GLVGSKSLSQEDMEPVLEKMKEHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTV 390
Query: 354 ---MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
++++LV+IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKSTNLAK++YWL+++
Sbjct: 391 KQALQDSLVQILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAKISYWLIEN 450
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEA 457
+V++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EA
Sbjct: 451 GFTVLIAACDTFRAGAVEQLRTHQRRLNALHPPEKHGGQPVVQLYEKGYGKDAAGIAMEA 510
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
I A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL K
Sbjct: 511 IAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVK 570
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DL+
Sbjct: 571 FNQALADHSMSEKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRS 630
Query: 578 LNVKSIVKTLLK 589
LN +++V L+K
Sbjct: 631 LNARAVVGALMK 642
>gi|307214651|gb|EFN89594.1| Signal recognition particle receptor subunit alpha-like protein
[Harpegnathos saltator]
Length = 621
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/655 (38%), Positives = 350/655 (53%), Gaps = 100/655 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ER+G SF +DS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERTGNHSFEHDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEM-FRQLRKE 119
+ NE LVFV YQ+IL L YVD L + F + + + + S F F +
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNDVHLEFRDRFKNELENASWFSNFEFEHAYRL 115
Query: 120 AEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLE 179
RAE+ +++ K Q++ + S ++ D D + K++
Sbjct: 116 VLERAEQWSRTQ---------AKLPKQMRTFDESQKSKKTVASMIERKDDKDEKKAAKIQ 166
Query: 180 NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPD 239
N + E + V NG+ + + I ++++ ++ G+K K +P
Sbjct: 167 E------NSKQEPMKQQAVHNGELDEETLIA----NRMKLVQKMTGQKKKA--DKQKSPK 214
Query: 240 PKKKITKKNRVWD---------------DSPPES----KLDFTDPAGGNGSNIEVEAADH 280
P+K KK R+W+ D P ES D T GS ++E
Sbjct: 215 PEKA-GKKPRIWELGGTVKDLAALERTKDKPEESGDYVPADTTLVGQMKGSIRDLEVNSE 273
Query: 281 GESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQS-IAGKANLDKADLEPAL 339
E D +E E K + K T + G +L D+ P L
Sbjct: 274 SEED-------DDDDSDQETTERSKMQQTQKKTTSSSMFSMFKSLVGSKSLKHDDMAPVL 326
Query: 340 KALKDRLMTKNVAA--------------------------------MEEALVRILTPRRS 367
LKD L+TKNVAA + +ALV+IL+P+R
Sbjct: 327 DKLKDHLITKNVAADIAQKLCDSVGTKLEGKVLGTFDNVANTVKATLTDALVQILSPKRR 386
Query: 368 IDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 427
IDILRD AK+ +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAV
Sbjct: 387 IDILRDALEAKKTGRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAV 446
Query: 428 EQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTA 474
EQLRTH R L V ++EKGY KD A +A EAI+ A D+VLVDTA
Sbjct: 447 EQLRTHMRHLNALHPQEKHGNVPMVQLYEKGYGKDAAGIAMEAIRFAKDCLFDIVLVDTA 506
Query: 475 GRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLI 534
GRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +I
Sbjct: 507 GRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSQSVNPHII 566
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DGI+LTKFDTIDDKVGAA++M Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 567 DGIVLTKFDTIDDKVGAAITMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 621
>gi|170580372|ref|XP_001895235.1| signal recognition particle receptor alpha subunit [Brugia malayi]
gi|158597920|gb|EDP35937.1| signal recognition particle receptor alpha subunit , putative
[Brugia malayi]
Length = 669
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 261/692 (37%), Positives = 374/692 (54%), Gaps = 126/692 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLE----------------ERSG 44
M+E IF +GG++LW C + G L I+ LIR L++ ER
Sbjct: 1 MIELFTIFGKGGIVLW-CFQEGGQLFTDSINQLIREVLMQVYPYYFDIISSMNEKNERGN 59
Query: 45 LASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT 104
F ++ T+K+ NE LVF+ VYQ + L Y D LL+ + + F ++Y +
Sbjct: 60 TTVFKHND----LTIKYKLDNEFELVFIVVYQSAIQLAYTDQLLSDVHKKFRDMYKNVLS 115
Query: 105 D-----------YSDFDEMFRQLRKEAEA-----------RAEELKKSKQ-----VTKPM 137
D + F ++F++L +EA+ + EE +KSK+ + +P
Sbjct: 116 DNKLLFSSTFRTFRQFSDVFQRLYREAQILSTKQPDKVMRKFEESEKSKKTIASIIERPN 175
Query: 138 NN---LKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESR 194
L K+ + QK + + N G KL NG+ +V ++ +ES
Sbjct: 176 EKSAKLLKEKEEQQKRLKHKNKEKVISSKTN---------GSKLANGY-DVSEMK-KESP 224
Query: 195 VTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDS 254
+ V + + + +++ + KG KK++ + K +N + K K+ RVWD S
Sbjct: 225 QSDVTSDSPKSDTEKEEMQRRRVEFFKKKGAKKSE--LEKQNNLSVESKKGKQARVWDLS 282
Query: 255 ----PPESKLDFTDPAGGNGSNI-EVEAADHGESMMD-----KEEVFSSDSESEED---- 300
LD++ N N+ E E E M K E+ E ED
Sbjct: 283 GNVKADIDSLDYSKGKSDNAVNMTEQEDRKFVEEQMQFVGHFKGELPGLIDEQNEDLDVN 342
Query: 301 ----EEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA--- 353
+EV + N D GWFS+ F+S+ G L D++P L +++ L+ KNVAA
Sbjct: 343 EDMNDEVNEENGHD----GWFSA-FRSLVGNKKLTVEDIKPVLDKMRETLIAKNVAADPA 397
Query: 354 -----------------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPY 384
+ +ALV++LTP+R +DILRD+ AK +++PY
Sbjct: 398 EKLCQSVEVKLEGKVVGTFSRVASIVKESVRDALVQLLTPKRRVDILRDILEAKREKRPY 457
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------ 438
++VF GVNGVGKSTNLAK+ +WL ++ V++AA DTFR+GAVEQLRTH + L
Sbjct: 458 IIVFCGVNGVGKSTNLAKITFWLNENGHKVLIAAADTFRAGAVEQLRTHTKHLNALHPNS 517
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
V ++E+GY KDPA +A AI A G+DVVLVDTAGRMQDNEPLMR+L+KLI +N PDL
Sbjct: 518 VQLYEQGYGKDPAGLAAAAISIAVERGTDVVLVDTAGRMQDNEPLMRSLAKLIQVNQPDL 577
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP-QLIDGILLTKFDTIDDKVGAALSMVY 557
VLFVGEALVGN+AVDQL KFNQ LAD ++ + +LIDGI+LTKFDTIDDKVGAA+SM Y
Sbjct: 578 VLFVGEALVGNEAVDQLVKFNQSLADHAALGDEGRLIDGIVLTKFDTIDDKVGAAISMTY 637
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
++G P++FVG GQ+Y DLK LN ++V +LLK
Sbjct: 638 ITGQPIVFVGTGQTYKDLKSLNASAVVHSLLK 669
>gi|303281744|ref|XP_003060164.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226458819|gb|EEH56116.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 628
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/386 (55%), Positives = 265/386 (68%), Gaps = 49/386 (12%)
Query: 243 KITKKNRVWDDSPPESK-LDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSD--SESEE 299
K K+ RVW D+ ++K LDF+ A G+G AD G++ + +V D + S
Sbjct: 250 KRPKEKRVWADTKGKAKDLDFS--ARGDG-------ADGGDAPTEGPDVQRVDISAPSRV 300
Query: 300 DEEVGKHNKPDAKKTGWFSSMFQSIAGKAN----LDKADLEPALKALKDRLMTKNVA--- 352
D + +S+A N L++ DL P L+ LK M KNVA
Sbjct: 301 DADDDDDALSSEDDDEDDEEEARSLAAAMNASTALEEEDLAPVLETLKTNFMNKNVAEEI 360
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKP 383
AME+AL RILTP RS+D+LR+V AK +P
Sbjct: 361 AERLCESVAASLRGRKLASFSSLSAMVKRAMEDALTRILTPTRSVDVLREVKTAKASGRP 420
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE 443
YV+ FVGVNGVGKSTNL+KVAYWLLQH V VM+AACDTFR+GAVEQLRTH +RL VP+FE
Sbjct: 421 YVITFVGVNGVGKSTNLSKVAYWLLQHDVRVMIAACDTFRAGAVEQLRTHCKRLGVPLFE 480
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
+GYEKDPA VA EA++ A R G++VVLVDTAGRMQDNEPLMRAL+KLI +N PDLVLFVG
Sbjct: 481 RGYEKDPASVASEAVKAARRTGAEVVLVDTAGRMQDNEPLMRALAKLINVNEPDLVLFVG 540
Query: 504 EALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
EALVGNDAVDQLSKFN++L+DL++ + ++IDG++L+KFDTIDDKVGAALSMVY SGAP
Sbjct: 541 EALVGNDAVDQLSKFNERLSDLATDAKKRRVIDGVVLSKFDTIDDKVGAALSMVYTSGAP 600
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
VMFVGCGQ+YTDLK+LNV+S+VK+LL
Sbjct: 601 VMFVGCGQTYTDLKRLNVRSVVKSLL 626
>gi|345484693|ref|XP_003425102.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog isoform 2 [Nasonia vitripennis]
Length = 618
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 260/647 (40%), Positives = 367/647 (56%), Gaps = 87/647 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW + S ++ LI+S +L+ER+G F +DS L+
Sbjct: 1 MLDLFTIFSKGGIVLWCFQSTAQIFTPS-VNALIKSVILQERTGNQVFEHDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD---YSDFDEMFRQLR 117
+ NE LVFV YQ+IL L YVD L + F + + + + + ++D F++
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNDIHLEFRDRFKNELQNSKWFFNYD--FKKTY 113
Query: 118 KEAEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
++ AE+ KS+ ++ K M + F+ + DD ++
Sbjct: 114 EQVLVLAEQWGKSQAKIPKQMRTFDE--------SFKSKKTVASMIERKDDKEN------ 159
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL-QKLRNKGGKKTDTVVSKG 235
K +N V V + + V NG +I + KL QK+ + KK D K
Sbjct: 160 KKQNKPIEVPKVP-DSPKPATVQNGV--LDEDILLANRLKLAQKMASGPKKKAD----KQ 212
Query: 236 SNPDPKKKITKKNRVWD---DSPPESKLDFT-DPAGGNGSNIEVEAADHGE---SMMDKE 288
+P P+K KK RVW+ + + L+ T D G + + G+ + D E
Sbjct: 213 KSPKPEKA-GKKPRVWELGGTNKDLANLERTKDKPDDTGEYVAADTTIIGQMKGGIRDLE 271
Query: 289 EVFSSDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLM 347
S+ + + DE + K + KK+G S+F+++ G L + D+ P L+ LKD L+
Sbjct: 272 VESDSEEDDDSDEPEIEQVKTQSQKKSGGVFSIFKNLVGNKALKEEDMRPVLEKLKDHLI 331
Query: 348 TKNVAA--------------------------------MEEALVRILTPRRSIDILRDVH 375
+KNVAA + +ALV+IL+P+R +DILRD
Sbjct: 332 SKNVAAEIAQKLCDSICVKLEGKVLGTFDSVANTVKASLTDALVQILSPKRRVDILRDAF 391
Query: 376 AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
AK+ +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH +
Sbjct: 392 EAKKNGRPYVMAFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHMK 451
Query: 436 RLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEP 482
L V ++EKGY KD A +A EAI+ AT + DVVLVDTAGRMQDNEP
Sbjct: 452 HLNALHPPEKHGNMTMVQLYEKGYGKDAAGIAMEAIRFATDSRFDVVLVDTAGRMQDNEP 511
Query: 483 LMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKF 542
LMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S+S NP +IDGI+LTKF
Sbjct: 512 LMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSNSTNPHIIDGIVLTKF 571
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 572 DTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 618
>gi|390352525|ref|XP_797190.3| PREDICTED: signal recognition particle receptor subunit alpha-like
[Strongylocentrotus purpuratus]
Length = 644
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 267/679 (39%), Positives = 367/679 (54%), Gaps = 126/679 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW + A G+P+++LI+S +L+ER G SFN+ TLK
Sbjct: 1 MLDLFTIFSKGGIVLWCFQGTCQAF-GAPVNSLIKSGILQERGGSNSFNH----GTLTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTD----YSDFDEMFRQ 115
NE L+FV YQ IL L Y+D + + + F + Y D R+ DF + F++
Sbjct: 56 HKLDNEFELIFVVAYQNILALAYIDKFIDDIHREFRDKYKDVLRSGRIFGQFDFSDDFQR 115
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
+ +EAE KS V K +G Q++ S ++ D +
Sbjct: 116 VLREAE-------KSSVVAK-------KGKQMKSFEESHKSKKTVASMIIDPSKEE---- 157
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR------NKGGK--K 227
+ + N + GN + E S K+ + + G+ D + + R NK K K
Sbjct: 158 KNITNKAAKKGN-KTESSPQPSKKPAKQPETIDSGSLDEETINRNREKMFNRNKPKKVEK 216
Query: 228 TDTVVSKGSNPDPKKKITKKNRVW------DDSPPESKLDFTD-PAGGNGSNIEVEAAD- 279
+ V SK P KK TK+ W D P LD+++ P G NG++ E +
Sbjct: 217 SPKVTSK-----PTKK-TKQATTWGMGGNAKDMP---DLDWSEKPPGTNGTS---EGQNG 264
Query: 280 HGESMMDKEEVFSSDSESEEDEEVGKH--------------------NKPDAK-KTG--- 315
H E ++ E + + E G + +KP A+ KTG
Sbjct: 265 HKEFDLEDESAWVGTMKGELPNIDGLNEEEEEEEEEEEEEVEVKKAASKPKAQAKTGSRF 324
Query: 316 WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------------- 352
+MF+ + G LDK + P L ++D L KNVA
Sbjct: 325 GMFNMFRGLVGSKTLDKETMAPVLDKMRDHLTAKNVARDIAEKLCESVATKLEGKVLGTF 384
Query: 353 ---------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKV 403
++E+LV+IL+PRR +DILRD AK + KP+ + F GVNGVGKSTNLAK+
Sbjct: 385 GRVTSVVKETLQESLVQILSPRRRVDILRDALEAKARNKPFSITFCGVNGVGKSTNLAKI 444
Query: 404 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDP 450
+WL+++ V++AACDTFR+GAVEQLRTH R L V ++EKGY KD
Sbjct: 445 CFWLIENGFRVLIAACDTFRAGAVEQLRTHERHLNALHPAEKHGGHAPVQLYEKGYGKDA 504
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A +A EAI+ A DVVL+DTAGRMQDNEPLMRALSKLI +N PDLVLFVGEALVGN+
Sbjct: 505 AGIAMEAIKFARDYRFDVVLIDTAGRMQDNEPLMRALSKLIKVNRPDLVLFVGEALVGNE 564
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
AVDQL+KFN LAD S S +P+LIDGI+LTKFDTIDDKVGAA+SM Y +G P++FVG GQ
Sbjct: 565 AVDQLTKFNHALADFSDSDDPRLIDGIVLTKFDTIDDKVGAAISMTYTTGQPIVFVGTGQ 624
Query: 571 SYTDLKKLNVKSIVKTLLK 589
+Y DL+ LNV+++V LLK
Sbjct: 625 TYRDLRNLNVQAVVNALLK 643
>gi|345484695|ref|XP_003425103.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog isoform 3 [Nasonia vitripennis]
Length = 612
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/648 (40%), Positives = 360/648 (55%), Gaps = 95/648 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW + S ++ LI+S +L+ER+G F +DS L+
Sbjct: 1 MLDLFTIFSKGGIVLWCFQSTAQIFTPS-VNALIKSVILQERTGNQVFEHDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF-----SEIYDPKRTDYSDFDEMFRQ 115
+ NE LVFV YQ+IL L YVD L + F +E+ + K DF + + Q
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYVDKFLNDIHLEFRDRFKNELQNSKWFFNYDFKKTYEQ 115
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
+ AE K ++ K M + S +S A+ D+
Sbjct: 116 VLVLAEQWG---KSQAKIPKQMRTFDE-------------SFKSKKTVASMIERKDDKEN 159
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL-QKLRNKGGKKTDTVVSK 234
+K H + + V NG +I + KL QK+ + KK D K
Sbjct: 160 KKQSKYH--------DSPKPATVQNGV--LDEDILLANRLKLAQKMASGPKKKAD----K 205
Query: 235 GSNPDPKKKITKKNRVWD---DSPPESKLDFT-DPAGGNGSNIEVEAADHGE---SMMDK 287
+P P+K KK RVW+ + + L+ T D G + + G+ + D
Sbjct: 206 QKSPKPEKA-GKKPRVWELGGTNKDLANLERTKDKPDDTGEYVAADTTIIGQMKGGIRDL 264
Query: 288 EEVFSSDSESEEDEEVGKHNKPDAKK-TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
E S+ + + DE + K ++K +G S+F+++ G L + D+ P L+ LKD L
Sbjct: 265 EVESDSEEDDDSDEPEIEQVKTQSQKKSGGVFSIFKNLVGNKALKEEDMRPVLEKLKDHL 324
Query: 347 MTKNVAA--------------------------------MEEALVRILTPRRSIDILRDV 374
++KNVAA + +ALV+IL+P+R +DILRD
Sbjct: 325 ISKNVAAEIAQKLCDSICVKLEGKVLGTFDSVANTVKASLTDALVQILSPKRRVDILRDA 384
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
AK+ +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH
Sbjct: 385 FEAKKNGRPYVMAFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHM 444
Query: 435 RRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
+ L V ++EKGY KD A +A EAI+ AT + DVVLVDTAGRMQDNE
Sbjct: 445 KHLNALHPPEKHGNMTMVQLYEKGYGKDAAGIAMEAIRFATDSRFDVVLVDTAGRMQDNE 504
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTK 541
PLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S+S NP +IDGI+LTK
Sbjct: 505 PLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSNSTNPHIIDGIVLTK 564
Query: 542 FDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
FDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 565 FDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 612
>gi|289740369|gb|ADD18932.1| signal recognition particle receptor alpha subunit [Glossina
morsitans morsitans]
Length = 618
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/653 (39%), Positives = 359/653 (54%), Gaps = 99/653 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ +IFT+GG++LW+ G + S I+ LIRS +LEER+ + + Y+ A ++
Sbjct: 1 MLDFAVIFTKGGIVLWSFNSTGENV-NSCINNLIRSVILEERNTESKY-YEEDNLA--IQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
+ NE L++ AV+++++ L Y++ LL+ ++ +F E F Q+ +
Sbjct: 57 FKLDNEFELIYAAVFRKVIQLPYLNILLSDLQAAFKE--------------KFGQILASS 102
Query: 121 E---ARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRK 177
E A E K + K + N K + K R N S +N K
Sbjct: 103 ERLSANYEFEKDYLETLKAVENTAKLSSKAPKQ--MRSFNESLKSKKTVASMIENPNESK 160
Query: 178 LENGHSNVGNVEI-EESRVTGVANGKENTSSNIGAFDVSKLQKLRNK-GGKKTDTVVSKG 235
V VE + S + V + E N +KLR K GKK+ K
Sbjct: 161 KPENTKKVNIVECPKASTMEKVLSSAEIIEEN--------RRKLREKFSGKKSPPAEHKN 212
Query: 236 SNPDPKKKITKKNRVWD---DSPPESKLDFT--DPAGGNGSNIEVEAADHGESMMDKEEV 290
S + K KK RVWD +S + LD + +P N+E + + EV
Sbjct: 213 SKGE---KTGKKPRVWDYGGNSKDAALLDRSKDNPHDVTFKNLENNIVGTMQGSIRDLEV 269
Query: 291 FSSDSESEEDEEVGKHN-----KP----DAKKTGWFSSMFQSIAGKANLDKADLEPALKA 341
DS+ E + G H+ KP + +K+G S F+ I G L + DL+PAL
Sbjct: 270 ---DSDEEHENVNGLHHDIVVHKPRVLQNKEKSGILS-YFKGIVGSKTLTRNDLQPALDK 325
Query: 342 LKDRLMTKNVAA--------------------------------MEEALVRILTPRRSID 369
++D L++KNVAA + +LVRIL+P+R +D
Sbjct: 326 MRDHLISKNVAADISGKLCDSVASSLEGKSVGTFDSVASMVKEALTMSLVRILSPKRRLD 385
Query: 370 ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
I+RD AK PY ++F GVNGVGKSTNLAK+ +WL+++ SV++AACDTFR+GAVEQ
Sbjct: 386 IIRDAMEAKSNNTPYTIIFCGVNGVGKSTNLAKICFWLIENDFSVLIAACDTFRAGAVEQ 445
Query: 430 LRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 476
LRTH R L V ++EKGY KD A +A EAI+ A DVVLVDTAGR
Sbjct: 446 LRTHTRHLNALHPADRHDGRSMVQLYEKGYGKDAAGIAMEAIKFARDTRVDVVLVDTAGR 505
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDG 536
MQDNEPLMR+L+KLI +N+PDLVLFVGEALVGN+AVDQL KFNQ LAD SS NP +IDG
Sbjct: 506 MQDNEPLMRSLAKLIKVNDPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSDGNPHIIDG 565
Query: 537 ILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
I+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 566 IVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 618
>gi|344291486|ref|XP_003417466.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 1 [Loxodonta africana]
Length = 639
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 257/661 (38%), Positives = 357/661 (54%), Gaps = 95/661 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EA ++S ++ P K + + K G +S
Sbjct: 116 DFLRLLREA-------EESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKTKNSK 168
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
G+K + + + + TGV G EN ++SK + +R K
Sbjct: 169 KKGGKKEGSDGGPLATGKADSVVKTGVPVGPEN------GVELSKEELVRRKREEFMQKH 222
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE-------V 275
G+ + + PK+K K RVW +K LD++ P + +
Sbjct: 223 GRGVEKSSKSLKSDAPKEKGKKAPRVWALGGCANKDVLDYSTPTTNGTPEVALPEDINLI 282
Query: 276 EAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANLDKA 333
G + D + S D E+ + KP A K G M + + G +L +
Sbjct: 283 RGTGPGGQLQDLDCSSSDDDEASQST-----TKPSATKGTLGGMFGMLKGLVGSKSLSRE 337
Query: 334 DLEPALKALKDRLMTKNVAA--------------------------------MEEALVRI 361
D+E L ++D L+ KNVAA ++E+LV+I
Sbjct: 338 DMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQI 397
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
L P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDT
Sbjct: 398 LQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDT 457
Query: 422 FRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
FR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G DV
Sbjct: 458 FRAGAVEQLRTHTRRLTALHPPENHSGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDV 517
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S +
Sbjct: 518 VLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMA 577
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+
Sbjct: 578 QTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 637
Query: 589 K 589
K
Sbjct: 638 K 638
>gi|410046032|ref|XP_003952111.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
receptor subunit alpha [Pan troglodytes]
Length = 639
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 255/664 (38%), Positives = 358/664 (53%), Gaps = 101/664 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + ++ G + L+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGXSDSCTGPVNAXFVHILFLQERGGNNSFTHE----ALTLK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 57 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 116
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 117 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 168
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 169 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 222
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 223 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 281
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 282 -IRGTGSGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 334
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 335 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 394
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 395 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 454
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 455 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 514
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 515 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 574
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 575 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 634
Query: 586 TLLK 589
L+K
Sbjct: 635 ALMK 638
>gi|345800040|ref|XP_546411.3| PREDICTED: signal recognition particle receptor subunit alpha-like
[Canis lupus familiaris]
Length = 638
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/670 (38%), Positives = 358/670 (53%), Gaps = 114/670 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWASRGASLGFLGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + +
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKE 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-- 221
++D L G + V E+S G+ G EN ++SK + +R
Sbjct: 176 SSDG---------PLATGKA----VPAEKS---GLPAGPEN------GVELSKEELIRRK 213
Query: 222 -----NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE 274
K G+ + + PK+K K RVW +K LD++ P +
Sbjct: 214 REEFIQKHGRGLEKSSKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTTNGAPDAA 273
Query: 275 -------VEAADHGESMMDKEEVFSSDSESEEDEEVGKH-NKPDAKK--TGWFSSMFQSI 324
+ G + D D S +DEE ++ +KP A K G M + +
Sbjct: 274 PPEDINLIRGTGPGGQLQDL------DCSSSDDEETAQNASKPSATKGTLGGMFGMLKGL 327
Query: 325 AGKANLDKADLEPALKALKDRLMTKNVAA------------------------------- 353
G +L + D+E L ++D L+ KNVAA
Sbjct: 328 VGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQ 387
Query: 354 -MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++
Sbjct: 388 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 447
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 448 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIA 507
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 508 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 567
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 568 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 627
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 628 AKAVVAALMK 637
>gi|312382726|gb|EFR28083.1| hypothetical protein AND_04404 [Anopheles darlingi]
Length = 668
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 262/665 (39%), Positives = 356/665 (53%), Gaps = 107/665 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IFT+GG++LW C P++ LI+S +L+ERSG+ YD G +L+
Sbjct: 1 MLDLFTIFTKGGIVLW-CFRSTQQFFAPPVNALIKSVILQERSGV----YDHDG--LSLQ 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTDYSDFDEMFR 114
+ NE LVFV +Q+IL L YVD L+ + F + Y D + DF F+
Sbjct: 54 YKLDNEFELVFVVAFQKILQLAYVDKFLSDVHLEFRDKYKNELALDGRTYGQLDFSADFQ 113
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
++ + AE + Q T P + K R GG G +++
Sbjct: 114 RILERAEKWGRQ-----QATIPKAMRSYEDSAKSKKTVASMIERRGGEEKQQPGGKKSVK 168
Query: 175 --GRKLENGHS-NVGNVEIEESRVTGVANGKEN--TSSNIGAFDVSKLQKLRNKGGKKTD 229
+K E+G + +G V S + G + +E+ N F +K+ KG K
Sbjct: 169 IVEKKEEDGSAPRIGTVP--GSPIAGSSGPEESDLIRENRKKF----AEKMAGKGKK--- 219
Query: 230 TVVSKGSNPDP--KKKITKKNRVWD---------------DSPPESKLDFT--DPAGGN- 269
V K +P ++K K+ RVWD D P + + DF+ D G+
Sbjct: 220 --VEKQKSPKSPGQQKAGKQMRVWDLGGNTKDLPNLDRSKDRPEDVRSDFSPNDQIIGSM 277
Query: 270 -GSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKA 328
G +++ + D E E D GK G FS MF+ + G
Sbjct: 278 KGGIRDLDVESDTDDDDDDYSEDEDVEEMERDS--GKKQSSGRGGGGMFS-MFRGLVGSK 334
Query: 329 NLDKADLEPALKALKDRLMTKNVAA--------------------------------MEE 356
NL + D++PAL L+D L+ KNVA + E
Sbjct: 335 NLSRDDMQPALDKLRDHLIAKNVATDIAQQLCESVAVKLEGRVIGTFDTIAATVKTTLTE 394
Query: 357 ALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMM 416
ALV+IL+P+R IDILRD AK +P+V+ F GVNGVGKSTNLAK+ +WL+++ +SV++
Sbjct: 395 ALVQILSPKRRIDILRDCLEAKRAGRPFVMSFCGVNGVGKSTNLAKICFWLIENNLSVLI 454
Query: 417 AACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATR 463
AACDTFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A
Sbjct: 455 AACDTFRAGAVEQLRTHMRHLNALHPPERHGGRSMVQLYEKGYGKDAAGIAMEAIRHAHD 514
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
+G D+VL+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL LA
Sbjct: 515 SGIDLVLIDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLV----NLA 570
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
D SS P +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++
Sbjct: 571 DYSSRDRPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKALNAKAV 630
Query: 584 VKTLL 588
V L+
Sbjct: 631 VHALM 635
>gi|326516596|dbj|BAJ92453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 218
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/218 (91%), Positives = 209/218 (95%)
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
RDV AAKE+ KPYVVVFVGVNGVGKSTNLAKVAYWLLQH +SVMMAACDTFRSGAVEQLR
Sbjct: 1 RDVQAAKERGKPYVVVFVGVNGVGKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLR 60
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
THARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 61 THARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLI 120
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
LN PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGA
Sbjct: 121 NLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGA 180
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSMVY+SG+PVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 181 ALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 218
>gi|348688644|gb|EGZ28458.1| hypothetical protein PHYSODRAFT_552205 [Phytophthora sojae]
Length = 551
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/582 (40%), Positives = 334/582 (57%), Gaps = 84/582 (14%)
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS--DFDEMFRQL 116
++W F N+L LVFV VYQ+IL LLY+++LL ++K+ F ++ + + + +++ F ++
Sbjct: 1 MQWVFENKLDLVFVVVYQKILQLLYIEELLEIVKKDFIALFPQQIANKTPVKYEDKFTKI 60
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
K E + E K++++ + N KK A G + N G+
Sbjct: 61 LKATELKFTE-KQTRKGPRAFNASKK---------------------AKAKGVTSNTAGK 98
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKE---NTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
+ S E+ + ++GK+ N A SK++K+R +K +
Sbjct: 99 TASSARSAATADSSEDGSDSHTSDGKDKDLEELENEAALRSSKVRKMRTGPRRKCKDKAA 158
Query: 234 KGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVF-- 291
K S KK KK WDD+ K A + + A + + +K E +
Sbjct: 159 KES-----KKSGKKMTKWDDTKVTKK-----EAEALDRSKMITAEEEEAQLREKREAYIG 208
Query: 292 -SSDSESEE----DEEVGKHN--KPDAKKTGW-FS-----SMFQSIAGKANLDKADLEPA 338
DS+SEE D+E + + DA +GW FS + +++G L++ DLEP
Sbjct: 209 EMEDSDSEEFSDTDDESAASSGAESDASNSGWSFSKTRLGNFLSTVSGNKILEREDLEPV 268
Query: 339 LKALKDRLMTKNVA--------------------------------AMEEALVRILTPRR 366
+ + L++KNVA A+E AL+RILTP++
Sbjct: 269 ITPMHQMLISKNVASEVADELCESVVTTVVGQRLESFTRISTVVRKALEAALLRILTPKK 328
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
S D+LR++ AK + + Y +VFVGVNGVGKST+L+KV Y+L V+VM+AACDTFRSGA
Sbjct: 329 STDVLREILQAKAEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGA 388
Query: 427 VEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
VEQL HA+ L V +F+KGY KDPA VAKEAI+ T NG D VL+DTAGRMQ+NEPLMRA
Sbjct: 389 VEQLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRA 448
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L+KL+ N PDLVLFVGEALVGND +DQLS F++ LAD S P IDGI++TKFDTID
Sbjct: 449 LAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRRVPHRIDGIVITKFDTID 508
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DKVGAA+SMVY +G PVMFVG GQ YT LKKLNV+++++ LL
Sbjct: 509 DKVGAAVSMVYKTGQPVMFVGTGQKYTHLKKLNVRTVLRHLL 550
>gi|221132103|ref|XP_002161830.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Hydra magnipapillata]
Length = 644
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/658 (40%), Positives = 365/658 (55%), Gaps = 84/658 (12%)
Query: 1 MLEQLLIFTRGGLILWTCK-ELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTL 59
ML+ IFT+GG++LW + +GN SPI+ LI++ +L+ERSG S+ + Y L
Sbjct: 1 MLDFFSIFTKGGIVLWYFQGTVGNFT--SPINELIKNVILQERSGSGSYTHGQLAIQYKL 58
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK--RTDYS--DFDEMFRQ 115
NE LVFV YQ IL L Y+D LL+ ++ F + Y+ + R+ +S +F E+F
Sbjct: 59 ----DNEFELVFVVGYQNILRLSYIDKLLSDIQLEFRDRYNNQIIRSLFSSFNFQEIFVN 114
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
+ E E ++ K+ + N KK Q+G E + + D +
Sbjct: 115 ILAENEQSSKMAKREMKSFADSNCAKKI--MKQRGTLELSNTKKDEKKIKSDDAP--ISP 170
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG 235
+ + S +V +V V T I + L K KG KK T
Sbjct: 171 KPISKSKSTSDSVTSTTEKV--VEEADLITEDQIIEQNRQLLIKGMLKGKKKVKT--ESK 226
Query: 236 SNPDPKKKITKKNRVWDDS---PPESKLDFTDPAGGNGSNIEVEAADHGESMMDKE---- 288
+P K K K+ R W + LD+++ + +N+ + ++ ++M+ +
Sbjct: 227 QSPQQKGKKVKEGRSWTNGGLLKDALVLDYSESNENHSNNMLNDVSEEDKAMVGQMRGEL 286
Query: 289 ---EVFSSDSESEEDEEVGKHNKP-----DAKKT-----GWFSSMFQSIAGKANLDKADL 335
EV + E EE EE K +K D KK+ G S F+ +AG+ + +
Sbjct: 287 KSIEVSKGNIEEEELEEQDKDSKKVTVGNDTKKSQSSVGGSVFSFFKGLAGQKAITMEAM 346
Query: 336 EPALKALKDRLMTKNVA--------------------------------AMEEALVRILT 363
+P L +++ L +KNVA +MEE+LV+IL+
Sbjct: 347 QPVLDKMREHLCSKNVATDISEKLCNSVAAKLEGKVLGTFTGVATAVRSSMEESLVQILS 406
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
P++ IDILRDV +K++ PYV+VF GVNGVGKSTNLAK+ +WLL++ VM+AACDTFR
Sbjct: 407 PKKRIDILRDVMESKKKGLPYVIVFCGVNGVGKSTNLAKICFWLLENNHRVMIAACDTFR 466
Query: 424 SGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
SGAVEQLRTH RL QV +++KGY KD A V+ EAI A DVVL
Sbjct: 467 SGAVEQLRTHTCRLKALHPKASPSAPEQVFLYDKGYGKDAAAVSMEAINLAKDLKCDVVL 526
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGRMQDNEPLMR+L+KLI +N P+LVLFVGEALVGND VDQL KFNQ LAD S N
Sbjct: 527 VDTAGRMQDNEPLMRSLAKLIKINEPNLVLFVGEALVGNDGVDQLRKFNQALADHSDVNN 586
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P LIDGI+LTKFDTIDDKVGA++SM Y +G P++FVG GQ+YTDL+ LNV ++VK LL
Sbjct: 587 PHLIDGIVLTKFDTIDDKVGASISMTYETGQPIVFVGTGQTYTDLRNLNVNAVVKALL 644
>gi|426251735|ref|XP_004019577.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
receptor subunit alpha [Ovis aries]
Length = 642
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 256/674 (37%), Positives = 359/674 (53%), Gaps = 118/674 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNAL------KGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ IF++GGL+LW + + + P+D L +ER G SF ++
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSXSPLTDPGPPSHPVDIL----FFQERGGNNSFTHE--- 53
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS------- 107
A TLK+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S
Sbjct: 54 -ALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNG 112
Query: 108 --DFDEMFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSN 157
DF F +L +EAE ++ + + S++ KP+ ++ + G+ K +
Sbjct: 113 TFDFQNDFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKK 172
Query: 158 RSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL 217
G DG + E VG NG+E +SK
Sbjct: 173 NKGAKKEGSDGPLTASKAAPAEKSGQPVGP-----------ENGEE----------LSKE 211
Query: 218 QKLR-------NKGGKKTDTVVSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGG 268
+++R K G+ + + PK+K K RVW S + LD++ P
Sbjct: 212 EQIRRKREEFIQKHGRGMEKSGKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPT-- 269
Query: 269 NGSNIEVEAADHGESMMDK-----EEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSM 320
+N EAA + + + ++ D S +DE +++ KP A K G M
Sbjct: 270 --TNGAPEAAPPEDINLIRGTGPGRQLQDLDCSSSDDEGAAQNSAKPSATKGTLGGMFGM 327
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------------- 353
+ + G +L + D+E L ++D L+ KNVAA
Sbjct: 328 LKGLVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 387
Query: 354 -----MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL
Sbjct: 388 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 447
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAK 455
++ SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A
Sbjct: 448 ENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAM 507
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL
Sbjct: 508 EAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQL 567
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL
Sbjct: 568 VKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDL 627
Query: 576 KKLNVKSIVKTLLK 589
+ LN K++V L+K
Sbjct: 628 RSLNAKAVVAALMK 641
>gi|312071485|ref|XP_003138630.1| srpr protein [Loa loa]
gi|307766205|gb|EFO25439.1| srpr protein [Loa loa]
Length = 662
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 255/679 (37%), Positives = 367/679 (54%), Gaps = 114/679 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IF +GG++LW C + G L ++ LIR L++ER F +D T+K
Sbjct: 8 MIELFTIFGKGGIVLW-CFQEGGQLFTDSVNQLIREVLMQERGNTTVFKHDD----LTIK 62
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD-----------YSDF 109
+ NE LVF+ +YQ + L Y D LL+ + + F ++Y +D Y F
Sbjct: 63 YKLDNEFELVFIVIYQSAIQLAYTDQLLSDVHKKFRDMYKNVLSDNKSLFSSTTRTYKQF 122
Query: 110 DEMFRQLRKEAEA-----------RAEELKKSKQ-----VTKPMNN---LKKQGGQLQKG 150
+++F+QL EA+ + EE +KSK+ + +P L K+ + QK
Sbjct: 123 NDVFQQLYHEAKILSTKQPDKVMRKFEESEKSKKTIASIIERPNEKSAKLLKEKEEQQK- 181
Query: 151 GFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIG 210
R +S G S + G KL NG+ NV V+ E S+ + + +
Sbjct: 182 ---RLKQKSQGKVI-----SPKINGSKLTNGY-NVSKVKKELSQ--------PDIAPDSP 224
Query: 211 AFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKIT-------KKNRVWD-DSPPESKLDF 262
D K + R + K K+ + K+ RVWD ++ +D
Sbjct: 225 KSDTEKEEIQRRRAEFFKKKGTKKFGTESEKQNVVSVESKKGKQARVWDLVGNGKADIDS 284
Query: 263 TDPAGGNGSNI-EVEAADHGESMMDKEEVFSS---------DSESEEDEEVGKHNKPDAK 312
D + +NI E+ D + + ++ + + +SE E V +
Sbjct: 285 LDYSKEKRNNIVEITKQDDRKFVEEQMQFVGHFKGELPGLIEEQSENLEVVEDEDDEMNG 344
Query: 313 KTG---WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------------- 353
+ G WFS+ F+S+ G L D++P L +++ L+ KNVAA
Sbjct: 345 EKGHGRWFSA-FRSLVGNKKLTVEDIKPVLDKMRETLIAKNVAAEPAEKLCQSVEVKLEG 403
Query: 354 ----------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
+ EALV++LTPRR +DILRD+ AK +++PY++VF GVNGVGKS
Sbjct: 404 KVVGTFSRVASIVKESVREALVQLLTPRRRVDILRDIFEAKREKRPYIIVFCGVNGVGKS 463
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPA 451
TNLAK+ +WL ++ V++AA DTFR+GAVEQLRTH L V ++E+GY KDPA
Sbjct: 464 TNLAKITFWLNENGHKVLIAAADTFRAGAVEQLRTHTMHLNALHPNSVQLYEQGYGKDPA 523
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+ AI A G+DVV+VDTAGRMQDNEPLMR+L+KLI LN PDLVLFVGEALVGN+A
Sbjct: 524 GLTAAAISIAMERGTDVVMVDTAGRMQDNEPLMRSLAKLIQLNKPDLVLFVGEALVGNEA 583
Query: 512 VDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
VDQL KFNQ LAD ++ +LIDGI+LTKFDT+DDKVGAA+SM Y++G P++FVG GQ
Sbjct: 584 VDQLVKFNQALADHAALGVEGRLIDGIVLTKFDTVDDKVGAAISMTYITGQPIVFVGTGQ 643
Query: 571 SYTDLKKLNVKSIVKTLLK 589
+Y DLK L++ ++V +LLK
Sbjct: 644 TYKDLKSLDINTVVHSLLK 662
>gi|242010419|ref|XP_002425965.1| signal recognition particle receptor alpha subunit, putative
[Pediculus humanus corporis]
gi|212509956|gb|EEB13227.1| signal recognition particle receptor alpha subunit, putative
[Pediculus humanus corporis]
Length = 615
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 258/657 (39%), Positives = 345/657 (52%), Gaps = 110/657 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF+RGG++LW C + + + ++ LIR+ +L+ERSG S+ ++ A L+
Sbjct: 1 MLDLFTIFSRGGIVLW-CFQSTSQIFTPSVNALIRTVILQERSGNNSYEHE----ALRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY--DPKRTDY-SDFDEMFRQLR 117
+ NE LVFV YQ+IL L Y+D L + F + Y D K + Y DFD
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYIDKFLNDVHLLFRDKYKDDLKLSRYFQDFDF------ 109
Query: 118 KEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRK 177
+++ + L ++Q +K N + KQ + E ++ S + + K
Sbjct: 110 --SDSYQKALHSAEQWSKIQNKIPKQMRSFE----ESAKSKKTVASMIEKREVKEKVPVK 163
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL-QKLRNKGGKKTDTVVSKGS 236
E + V E + + NG+ S I ++SKL K NK GK K
Sbjct: 164 KEASKLHAEKV-TETPKTDHLTNGE--LSEEIRLQNLSKLAMKFNNKKGK------DKTK 214
Query: 237 NPDPKKKITKKNRVWD--------------DSPPESKLDFTDPAGGNGSNIEVE-----A 277
+P P K+ KK RVWD P + L F +P + I
Sbjct: 215 SPKPSKE-GKKPRVWDLGGTVKDLDELDRTKDKPTTDLHF-NPDTAFWTKISKSYLLQMV 272
Query: 278 ADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEP 337
S+ D E +SD E E E + N K SMF+ + G L D+ P
Sbjct: 273 GKMVGSIRDIEVDSASDEEENETEMISNSNNQTVPKGKGMFSMFRGLVGSKALTLEDMSP 332
Query: 338 ALKALKDRLMTKNVAA--------------------------------MEEALVRILTPR 365
L LKD L+ KNVAA + E+LV+IL+PR
Sbjct: 333 VLDKLKDHLIAKNVAADIAGKLCDSVAVKLQGKILGTFDRIATTVEATLNESLVQILSPR 392
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
R +DILRD AK+Q +PYV+VF GVNGVGKSTNLAK+ +WL+++K V++AACDTFR+G
Sbjct: 393 RRVDILRDAFEAKKQSRPYVMVFCGVNGVGKSTNLAKICFWLIENKFRVLIAACDTFRAG 452
Query: 426 AVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
AVEQLRTH R L V ++EKGY KD A +A EAI A + D+VLVD
Sbjct: 453 AVEQLRTHTRHLNALHPPEKNNNLQMVQLYEKGYGKDAAGIAMEAIGYARDSNIDIVLVD 512
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLM+AL+KLI +N+PDLV V KFNQ LAD S S NP
Sbjct: 513 TAGRMQDNEPLMKALAKLIKVNSPDLVXXV--------------KFNQALADFSQSINPH 558
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN KS+V L+K
Sbjct: 559 LIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKSVVSALMK 615
>gi|390598347|gb|EIN07745.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 680
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/711 (36%), Positives = 359/711 (50%), Gaps = 156/711 (21%)
Query: 1 MLEQLLIFTRGGLILWT-----CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ IF +GG++LW+ + SP+++LIR L+E R+ AS++ D
Sbjct: 1 MLDHCSIFHKGGIVLWSKSFTPTAAQVASSSASPVNSLIREALIEGRAAEASYDKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY--------- 106
Y LKW+F N+L L+FV YQRIL L YVD+LLA+MK F ++++P T +
Sbjct: 57 GYALKWSFMNDLELIFVVAYQRILQLTYVDELLAVMKTLFIKMFEPFLTTFVASLHATSS 116
Query: 107 ---------------------SDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGG 145
+D MF ++ + E +A + +KS+ +PM +
Sbjct: 117 GQLASGTLGVTPASWSFAKAFEGWDAMFDKVLRGLEDKAAQERKSR--IRPMTRV----- 169
Query: 146 QLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENT 205
AN SD+ SN + ++E + +N
Sbjct: 170 -----------------VANPSPPSDDQ-----STIPSNTDSTSVDEQAIARNVQALKNR 207
Query: 206 SSNIGAFDVSKLQKL---RNKGGKKTDTVVSKGS--NPDPKKKITKKNRVWDDSPPE--- 257
G + R + G D+V + S P +K K+ R W DS P
Sbjct: 208 LRGRGGGGRRGSGRGPIARTESGSGRDSVPNSDSEMTPSKRKPKAKEQRRWGDSAPTESD 267
Query: 258 -SKLDFT-----DPAGGNGSNIE--VEAADHGESMMD-----KEEVFSSDSESEEDEE-- 302
+ LDF+ D AG + +++ V+ G D K+ F S D +
Sbjct: 268 MATLDFSVDKQSDAAGPSSLDLQALVDQTSLGTRTTDGLYEVKDWEFMEKDGSGSDSDFV 327
Query: 303 -------VGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--- 352
+ K + G F SMF + G L + DL+P L+A+K LM KNVA
Sbjct: 328 SAALKSSIDKEREEKGGGMGLFGSMFARLTGSKVLTEEDLKPVLEAMKQHLMKKNVAKEI 387
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHA------- 376
A+ +L RILTP+ S D+L +
Sbjct: 388 ADKVCEGVAEGLIGKKIGGFQTTNAAFRQALSNSLTRILTPKTSTDLLLSIRTKLSSPLP 447
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
+ + R PY + FVGVNGVGKSTNL+KV +WL+Q+ V++AACDTFRSGAVEQLR H R
Sbjct: 448 STQHRLPYSITFVGVNGVGKSTNLSKVCFWLIQNGFRVLIAACDTFRSGAVEQLRVHVRN 507
Query: 437 LQ---------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
L V +FE+GY KD A +AKEAI A N DVVL+DTAGRMQDNE
Sbjct: 508 LGMLGVNGNGPTGSKGGVELFERGYGKDAAGIAKEAITYAKDNDFDVVLIDTAGRMQDNE 567
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN----PQLIDGI 537
PLMRAL+KL+ +NNPD +LFVGEALVGN+AVDQL KF++ L D SS+ + IDG+
Sbjct: 568 PLMRALAKLVAVNNPDKILFVGEALVGNEAVDQLQKFDRALRDFSSASGGAGKGRGIDGM 627
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
++TK+DT+DDKVGAALSM YV+G P++FVG GQ+YTDLK+L V ++V+ ++
Sbjct: 628 IVTKWDTVDDKVGAALSMTYVTGQPIVFVGTGQTYTDLKQLRVANVVQAII 678
>gi|301117886|ref|XP_002906671.1| signal recognition particle receptor subunit alpha [Phytophthora
infestans T30-4]
gi|262108020|gb|EEY66072.1| signal recognition particle receptor subunit alpha [Phytophthora
infestans T30-4]
Length = 549
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/581 (40%), Positives = 329/581 (56%), Gaps = 82/581 (14%)
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS--DFDEMFRQL 116
++W F N+L LVFV VYQ+IL LLY+++LL ++K+ F ++ + + + +++ F ++
Sbjct: 1 MQWVFENKLDLVFVVVYQKILRLLYIEELLEIVKKDFMAMFPQQIANKTPVKYEDKFTKI 60
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGR 176
K E + E K++++ + N KK A G + N G+
Sbjct: 61 LKATELKFTE-KQARKGPRAFNASKK---------------------AKAKGVTSNTSGK 98
Query: 177 KLENGHSNVGNVEIEESRVTGVANGKENTSSNIG--AFDVSKLQKLRNKGGKKTDTVVSK 234
+ S E+ + ++GK+ + + A SK++K+R +K +K
Sbjct: 99 TASSSRSATTADSSEDGSDSPTSDGKDKSLEELENEAALRSKVRKMRTGPRRKGKDKAAK 158
Query: 235 GSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVF--- 291
+ KK KK WDD+ K A + A + + +K E +
Sbjct: 159 ET-----KKSGKKMTKWDDTKVSKK-----EAEALDRSKTTTAEEEEAQLREKREAYIGE 208
Query: 292 SSDSESEE-----DEEVGKHNKPDAKKTGW-FS-----SMFQSIAGKANLDKADLEPALK 340
DSESE+ DE GW FS + +++G L++ DLEP +
Sbjct: 209 MEDSESEDFSDTDDESAASSGAESDSSQGWSFSKTRLGNFLSTVSGNKILEREDLEPVIT 268
Query: 341 ALKDRLMTKNVA--------------------------------AMEEALVRILTPRRSI 368
+ L++KNVA A+E AL+RILTP++S
Sbjct: 269 PMHQMLISKNVASEVADELCESVITTVVGQRLESFTRISTVVRKALEAALLRILTPKKST 328
Query: 369 DILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 428
D+LR++ AK + + Y +VFVGVNGVGKST+L+KV Y+L V+VM+AACDTFRSGAVE
Sbjct: 329 DVLREILQAKSEGRAYSIVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAACDTFRSGAVE 388
Query: 429 QLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
QL HA+ L V +F+KGY KDPA VAKEAI+ T NG D VL+DTAGRMQ+NEPLMRAL+
Sbjct: 389 QLNQHAKVLDVELFQKGYAKDPASVAKEAIKYGTENGYDCVLIDTAGRMQNNEPLMRALA 448
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
KL+ N PDLVLFVGEALVGND +DQLS F++ LAD S P IDGI++TKFDTIDDK
Sbjct: 449 KLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALADYSDRREPHRIDGIVVTKFDTIDDK 508
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VGAA+SMVY +G P+MFVG GQ YT LKKLNV+++++ LL+
Sbjct: 509 VGAAVSMVYKTGQPIMFVGTGQKYTHLKKLNVRTVMRHLLQ 549
>gi|302692290|ref|XP_003035824.1| hypothetical protein SCHCODRAFT_74228 [Schizophyllum commune H4-8]
gi|300109520|gb|EFJ00922.1| hypothetical protein SCHCODRAFT_74228 [Schizophyllum commune H4-8]
Length = 645
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/681 (36%), Positives = 359/681 (52%), Gaps = 131/681 (19%)
Query: 1 MLEQLLIFTRGGLILWTCK-----ELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ IF +GG++LW+ SP+++L+R L+E R+G + D
Sbjct: 1 MLDLCSIFHKGGIVLWSRSFTPEASALATSAASPVNSLVRDALIEGRTGEDKYEKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY--------- 106
Y +KWT N+L L+FV YQRIL L YV+DLL +K F ++Y P T +
Sbjct: 57 GYAVKWTLVNDLELIFVVAYQRILQLTYVEDLLTALKAIFVKLYGPFLTTFVASLHAVNP 116
Query: 107 -------------SDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFE 153
+ +D++F ++ +E E + + ++ P + +
Sbjct: 117 TEVPASWDFASVFAGWDQVFDKVLREFEDK----DRKSRLRAPARAVPLEA--------- 163
Query: 154 RGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFD 213
+ ++ D E+G + NV+ ++R+ G G S GA
Sbjct: 164 -----TISATSEDSSTEPAHEIEVAEDGQAIARNVQALKNRLRG--KGARRGSHRGGA-- 214
Query: 214 VSKLQKLRNKGGKKTDTVVSKGSNPDPKK-KITKKNRVWDDSPPE----SKLDFTDPA-G 267
GG+ ++ S + PKK K K R W D P ++LD++
Sbjct: 215 ----------GGR--ESAPSSDTEATPKKSKAKKTQRKWGDQPVTEDDMAQLDYSGAGKA 262
Query: 268 GNGSNIEVEA----ADHGESMMD-----KEEVFSSDSESEEDEEVGKHNKPDAKKT-GWF 317
+ S++++ A A G D K+ F+ D+++ +G + A + G
Sbjct: 263 ADASSLDISALVDSASLGTRTRDGMYEVKDWEFARDADAAIASALGSKDGDKAGGSLGAL 322
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------- 352
S+F G L ADL+P L+A+K LM KNVA
Sbjct: 323 GSLFARFTGGKVLTAADLQPVLEAMKQHLMKKNVAREIADKVCEGVGESLVGKKVGGFQT 382
Query: 353 -------AMEEALVRILTPRRSIDILRDVH----AAKEQRKPYVVVFVGVNGVGKSTNLA 401
A+ +L +ILTP+ S D+L + A R PY + FVGVNGVGKSTNL+
Sbjct: 383 TNAAVRSALSSSLTQILTPKTSTDMLLSIRTKLSAPAPARAPYTIAFVGVNGVGKSTNLS 442
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEK 448
KV +WL+Q+ + V++AACDTFRSGAVEQLR H R L +V +FE+GY K
Sbjct: 443 KVCFWLIQNGLRVLIAACDTFRSGAVEQLRVHVRNLGMLGVNGAADSKGRVELFERGYGK 502
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A + KEAIQ A N DVVL+DTAGRMQDNEPLMRAL+KL+ +NNPD ++FVGEALVG
Sbjct: 503 DAAAIGKEAIQYAKDNDFDVVLIDTAGRMQDNEPLMRALAKLVAVNNPDKIVFVGEALVG 562
Query: 509 NDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
N+AVDQL+KF++ L D SS S + IDG+L+TK+DT+DDKVGAALSM Y++G P++FVG
Sbjct: 563 NEAVDQLTKFDRALRDFSSMSGVGRGIDGMLVTKWDTVDDKVGAALSMTYITGQPILFVG 622
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
CGQ+YTDL++L V+++V+ +L
Sbjct: 623 CGQTYTDLRQLRVQNVVQAIL 643
>gi|442756641|gb|JAA70479.1| Putative signal recognition particle receptor alpha subunit [Ixodes
ricinus]
Length = 634
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 342/661 (51%), Gaps = 99/661 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++ G++LW C + L ++ LIR+ +L+ER G SF +++ TLK
Sbjct: 1 MLDLFTIFSKSGIVLW-CFQGTTQLFTPSVNALIRTVILQERGGNNSFTHEN----LTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
+ NE LVFV YQ++L L YVD L + F + Y + F KE
Sbjct: 56 YKLDNEFELVFVVAYQKVLQLSYVDKFLDDVHLEFRDKYKTSLESGNFFSNFV--FSKEF 113
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERG-SNRSGGGSANDDGDSDNMRGRKLE 179
EA + ++ +V Q + FE ++ S D D K +
Sbjct: 114 EAVLHDAEEHGRVIAAQ--------QKKMRTFEESLKSKKTVASMIIDNKKDAKPAVKAK 165
Query: 180 NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSN 237
+ E + + NG N A + QKL K G KKT+ +
Sbjct: 166 EAAKKKPEGKKEAAPAEVLTNGDSCGDLNDDAI-MKNRQKLFEKLQGKKKTE---KSCKS 221
Query: 238 PDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSES 297
P K +KK R+W+ S L D + G + + D G S EE+ +++S S
Sbjct: 222 PTATKDKSKKPRIWEHGGKSSDLKTLDYSEG----LSQDGDDPGRS----EELLTAESRS 273
Query: 298 EEDEEVG------------------------KHNKPDAKKTGWFSSMFQSIAGKANLDKA 333
+ G K K G SMF+ + G ++
Sbjct: 274 WVGKVGGEIKDMEYSESEEETDEDEEEPTNTKQQSSKRGKAGGMFSMFRGLVGSKSIAAE 333
Query: 334 DLEPALKALKDRLMTKNVAA--------------------------------MEEALVRI 361
D+ P L+ L+D L+TKNVA + E+LV++
Sbjct: 334 DMVPVLEKLRDHLITKNVATDVAQKLCDSVAAKLEGKVLGTFGRVASTVKATLHESLVQL 393
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
L+PRR I+ILRDV ++ ++ F GVNGVGKSTNLAK+ +WL+++ V++AACDT
Sbjct: 394 LSPRRRINILRDVLESQRAQRXXXXTFCGVNGVGKSTNLAKICFWLVENNCRVLIAACDT 453
Query: 422 FRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
FR+GAVEQLRTH R L V ++EKGY KD A +A EAI A DV
Sbjct: 454 FRAGAVEQLRTHMRHLNALHPPEKHSGKQMVQLYEKGYGKDAAGIAMEAINYARETKIDV 513
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VL+DTAGRMQDNEPLMRAL+KLI +N+PDLVLFVGEALVGN+AVDQL KFNQ LAD SS
Sbjct: 514 VLIDTAGRMQDNEPLMRALAKLITVNSPDLVLFVGEALVGNEAVDQLVKFNQALADHSSQ 573
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
NP LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +N K++V L+
Sbjct: 574 ENPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYIDLKTINAKAVVHALM 633
Query: 589 K 589
K
Sbjct: 634 K 634
>gi|332208934|ref|XP_003253565.1| PREDICTED: signal recognition particle receptor subunit alpha,
partial [Nomascus leucogenys]
Length = 608
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 248/627 (39%), Positives = 343/627 (54%), Gaps = 88/627 (14%)
Query: 31 DTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAM 90
+ LIRS LL+ER G SF ++ A TLK+ N+ LVFV +Q+IL L YVD L+
Sbjct: 1 NALIRSVLLQERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDD 56
Query: 91 MKQSFSEIYDPKRTDYS---------DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLK 141
+ + F + Y + S DF F +L +EAE +S ++ P K
Sbjct: 57 VHRLFRDKYRTEIQQQSALSLLNGTFDFQNDFLRLLREAE-------ESSKIRAPTTMKK 109
Query: 142 KQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANG 201
+ + K R + G + + +G K E + + + +G+ G
Sbjct: 110 FEDSEKAKKPV-RSMIETRGEKPKEKAKNSKKKGAKKEGSDGPLATSKPVPAEKSGLPVG 168
Query: 202 KENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-- 259
EN + K ++ K G+ + + PK+K K RVW+ +K
Sbjct: 169 PENGELSKEELIRRKREEFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEV 228
Query: 260 LDFTDPAGGNGS---------NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KP 309
LD++ P NG+ N+ + G + D D S +DE +++ KP
Sbjct: 229 LDYSTPTT-NGTPEAALSEDINL-IRGTGPGGQLQD------LDCSSSDDEGAAQNSTKP 280
Query: 310 DAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------- 353
A K G M + + G +L + D+E L ++D L+ KNVAA
Sbjct: 281 SATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKL 340
Query: 354 ------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
++E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVG
Sbjct: 341 EGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVG 400
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIF 442
KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +F
Sbjct: 401 KSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLF 460
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
EKGY KD A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFV
Sbjct: 461 EKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFV 520
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
GEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P
Sbjct: 521 GEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKP 580
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLLK 589
++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 581 IVFVGTGQTYCDLRSLNAKAVVAALMK 607
>gi|195174297|ref|XP_002027915.1| GL27063 [Drosophila persimilis]
gi|194115604|gb|EDW37647.1| GL27063 [Drosophila persimilis]
Length = 610
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 253/665 (38%), Positives = 355/665 (53%), Gaps = 131/665 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW + G S I++LIR +LE+R+ + + + A ++
Sbjct: 1 MLDFVVIFTKGGVVLWNSQTSGINF-SSCINSLIRGVILEDRNTESKYFEEDHLA---VQ 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTDYSDFDEMFR 114
+ NEL LV+ AV+Q+++ L Y+D LA M+ +F E + + ++Y DFD FR
Sbjct: 57 FKLDNELDLVYAAVFQKVIKLNYLDAFLADMQFAFKEKFGSIPALERLGSEY-DFDGEFR 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
+ AE + + K+ + + N +K S ++ DD R
Sbjct: 116 SVLSAAEEASSKQVKAPKAMRSYNESQK-------------SKKTVASMIQDDKKPVEKR 162
Query: 175 GRKLENGHSNVGNVEIEES--RVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVV 232
V I+ES + + T +I + KL++ K DT
Sbjct: 163 -------------VNIQESPTQPKSQPSSPPLTKQDIIQENRRKLREKLTPTKKAADT-- 207
Query: 233 SKGSNPDPKKKITKKNRVWD---------------DSPPESKL-----DFTDPAGGNGSN 272
+ +K KK RVWD DSP + + + G +
Sbjct: 208 KSAAKQGASEKTGKKPRVWDLGGNSKDAVLLDRSKDSPEDVQYQSISNELVGTMQGVIPD 267
Query: 273 IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT---GWFSSMFQSIAGKAN 329
++VE+ D +V S ++ SEED + P KK G S F+ I G
Sbjct: 268 LDVESED---------DVDSGEASSEEDNVSSQ--SPALKKNKRGGGLVSYFRGIVGGKI 316
Query: 330 LDKADLEPALKALKDRLMTKNVA--------------------------------AMEEA 357
+ D L++KNVA A+ ++
Sbjct: 317 I-----------CADHLISKNVASEIAVKLCDSVATSLEGKQVGTFDSVASLVKEALTQS 365
Query: 358 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
LVRIL+P+R IDI+RD +K KPY ++F GVNGVGKSTNLAK+ +WL+++ +V++A
Sbjct: 366 LVRILSPKRRIDIIRDALESKRSGKPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIA 425
Query: 418 ACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRN 464
ACDTFR+GAVEQLRTH R L V ++EKGY KD A +A EAI+ A
Sbjct: 426 ACDTFRAGAVEQLRTHTRHLNALHPPANHNNRTMVQLYEKGYGKDAAGIAMEAIKFAHET 485
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD
Sbjct: 486 KVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLAD 545
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V
Sbjct: 546 YSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVV 605
Query: 585 KTLLK 589
+L+K
Sbjct: 606 NSLMK 610
>gi|395520661|ref|XP_003764444.1| PREDICTED: signal recognition particle receptor subunit alpha,
partial [Sarcophilus harrisii]
Length = 601
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 244/627 (38%), Positives = 341/627 (54%), Gaps = 103/627 (16%)
Query: 39 LEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEI 98
L+ER G SFN++ A TLK+ N+ LVFV +Q+IL L YVD L+ + + F +
Sbjct: 1 LQERGGNNSFNHE----ALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDK 56
Query: 99 YDPKRTDYS---------DFDEMFRQLRKEAEARA-----------EELKKSKQVTKPMN 138
Y + ++ DF F +L +EAE + E+ +K+K+ K M
Sbjct: 57 YRTEIQQHNALSLLNGTFDFHNDFMRLLREAEESSKIRAPTAMKKFEDSEKAKKTVKSMI 116
Query: 139 NLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGV 198
+ G+ K + G + S +G + +G ++ S GV
Sbjct: 117 EFR---GEKPKEKAKSNKKNKGAKKEGPEATSPASKG-------APIGKPDLPVSPGDGV 166
Query: 199 ANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPES 258
KE K ++ K G+ D + PK+K K RVW S +
Sbjct: 167 ELSKEELMRK-------KREEFMQKHGRGADKSSKSSKSDAPKEKGKKAPRVWGLSGRAN 219
Query: 259 K-LDFTDPA--GGNGSNIE-----VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KP 309
+ LD++ P G + ++ + G + D D S +DE + +++ KP
Sbjct: 220 EVLDYSPPTTNGTPETTLQEDINLIRGTQAGGQLQD------LDCSSSDDEGITQNSAKP 273
Query: 310 DAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------- 353
A K G M + + G +L + D+E L ++D L+ KNVAA
Sbjct: 274 SATKGALGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIALQLCESVANKL 333
Query: 354 ------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
++E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVG
Sbjct: 334 EGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVG 393
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIF 442
KSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +F
Sbjct: 394 KSTNLAKISFWLLENNFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVHLF 453
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
EKGY KD A +A EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFV
Sbjct: 454 EKGYGKDAAGIAMEAISFARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNTPDLVLFV 513
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
GEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P
Sbjct: 514 GEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKP 573
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLLK 589
++FVG GQ+Y+DL+ LN K++V L+K
Sbjct: 574 IVFVGTGQTYSDLRSLNAKAVVAALMK 600
>gi|47214780|emb|CAG00952.1| unnamed protein product [Tetraodon nigroviridis]
Length = 648
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 265/677 (39%), Positives = 367/677 (54%), Gaps = 118/677 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG SF ++ A T
Sbjct: 1 MLDFFTIFSKGGIVLWCFQGAGVTQSFTG-PVNALIRSVILQERSGNNSFTHE----ALT 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DF 109
LK+ NE L+FV +Q+IL L YVD L+ ++ F + Y + +F
Sbjct: 56 LKYKLDNEFELLFVVGFQKILTLTYVDKLIDDIQLHFRDRYKNELVQKGALKFLNRSYEF 115
Query: 110 DEMFRQLRKEAE----ARAEELKKS-KQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
++ F QL +EAE AR+ L ++ K+ K +K ++ G ++G + G +
Sbjct: 116 EDDFSQLLREAEYSSKARSPALMRTFKESEKSQKTVK---SMIETKGGDKGKDPVGKKNK 172
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKG 224
N + +LE E + + A EN + + A ++ +QK R +
Sbjct: 173 N------AKKEAELEKA---------EHHKSSSSAKMVENGNQGLTAEEI--MQKKREEF 215
Query: 225 -GKKTDTVVSKGS-NPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSNIEVEAADHG 281
K+ T +K S +P P+K KK RVWD S SK LD+++ G +N DH
Sbjct: 216 FSKRMVTTTAKTSKSPKPQKPREKKMRVWDMSGTSSKNLDYSERNGDGSAN----DGDH- 270
Query: 282 ESMMD--------------KEEVFSSD-------SESEEDEEVGKHNKPDAKKTGWFSSM 320
E+ D K ++ S D EE V K +KP +KKTG F M
Sbjct: 271 EAQSDPVGPVTEGMQLSSMKGDLLSVDYDSSEEDEVEEERVVVSKTSKPTSKKTGGFGGM 330
Query: 321 ---FQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------------ 353
+ + G NL + D+E L +KD L+ KNVAA
Sbjct: 331 FGMLKGLVGSKNLTREDMESVLDKMKDHLIAKNVAADISAQLCDSVAKKLEGKVMGTFTT 390
Query: 354 --------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
++++LV QR+P+V+ F GVNGVGKSTNLAK+++
Sbjct: 391 VASTVKQALQDSLVXXXXXXXXXXXXXXXXXXXSQRRPFVITFCGVNGVGKSTNLAKISF 450
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAI 452
WL+++ +V++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A
Sbjct: 451 WLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPERHGGRPMVQLYEKGYGKDAAG 510
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
+A EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AV
Sbjct: 511 IAMEAIAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAV 570
Query: 513 DQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY 572
DQL KFNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y
Sbjct: 571 DQLVKFNQALADHSMSDRPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTY 630
Query: 573 TDLKKLNVKSIVKTLLK 589
DL+ LN +++V L+K
Sbjct: 631 NDLRNLNARAVVSALMK 647
>gi|326676235|ref|XP_003200533.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 1 [Danio rerio]
Length = 622
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 253/669 (37%), Positives = 352/669 (52%), Gaps = 128/669 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+
Sbjct: 1 MLDFFAIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQ------------------ 41
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD-FDEMFRQLR 117
F L L +V + + L + D ++Q + + ++ D F + R+
Sbjct: 42 --VGFQANLMLKYVDKFIDDVQLHFRDRYKNELEQRGALKFLLNNYEFGDDFHRLLREAE 99
Query: 118 KEAEARA-------EELKKSKQVTKPM------NNLKKQGGQLQKGGFERGSNRSGGGSA 164
+ ++A+ E+ +KSK+ K M + K+QGG+ K + SGG A
Sbjct: 100 ESSKAKGPASMRTFEQSQKSKKTVKSMIETKDADKSKEQGGKKSKNA--KKEAESGGDKA 157
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKG 224
S + +ENG ++ EIE +R + S +G G
Sbjct: 158 K--AASQAPAKKAVENGSESLTQDEIERNRAKFI-------SKQLG-------------G 195
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPES-KLDFTDPAGGNGSNIEVEAADHGES 283
GK S PK K+ NRVWD S +LD++ G N ++ + E D
Sbjct: 196 GKPEKPSKSPKPQGKPKGKV---NRVWDMGGKSSGELDYSGTNGNNSNDAKSEDNDATAE 252
Query: 284 MMDKEEVFSSD----------------SESEEDEEVGKHNKPDAKKTGW--FSSMFQSIA 325
+ E D E E+ V K AK++G+ M + +
Sbjct: 253 PAIQVESMKGDLRGVDYESSDDEDEEVEEEEKKVVVTNTKKTGAKRSGFGGMFGMLKGLV 312
Query: 326 GKANLDKADLEPALKALKDRLMTKNVAA-------------------------------- 353
G NL + D+EP L +KD L+ KNVAA
Sbjct: 313 GSKNLTQEDMEPVLDKMKDHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTVKQA 372
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
++++LV+IL P+R +DILRDV A+ QRKP+V+ F GVNGVGKSTNLAK++YWL+++ +
Sbjct: 373 LQDSLVQILQPKRRVDILRDVLEARSQRKPFVITFCGVNGVGKSTNLAKISYWLIENGFT 432
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQE 460
V++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 433 VLIAACDTFRAGAVEQLRTHQRRLNSLHPPEKHGGQPAVQLFEKGYGKDAAGIAMEAIAF 492
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A G DVVL+DTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+
Sbjct: 493 ARNQGFDVVLIDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNR 552
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y+DL+ LN
Sbjct: 553 ALADHSKSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYSDLRSLNA 612
Query: 581 KSIVKTLLK 589
+++V L+K
Sbjct: 613 RAVVSALMK 621
>gi|449489668|ref|XP_004174624.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
receptor subunit alpha [Taeniopygia guttata]
Length = 605
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 245/621 (39%), Positives = 338/621 (54%), Gaps = 93/621 (14%)
Query: 41 ERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD 100
ER G NY TLK+ N+ L+FV +Q+IL L YVD L+ + + F + Y
Sbjct: 5 ERGG----NYSXQHEGLTLKYNLDNQFELLFVVGFQKILTLTYVDKLIDDVHKEFRDKY- 59
Query: 101 PKRTDYS------------DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQ 148
R ++ DF + F +L ++AE +S +V P + K Q Q
Sbjct: 60 --RNEFQQKGALGLLNGTFDFKDDFMRLLRDAE-------ESSKVRAP--TVMKTFEQSQ 108
Query: 149 KGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVG---NVEIEESRVTGVANGKENT 205
K G + + ++G V + +++ +E T
Sbjct: 109 KSQKTVKCMIETRGEKPKEKVKNKKNKGSKKDGTEAVAAPSKASAGDKQLSAAGEKEELT 168
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTD 264
I + + + K G+K S+ PD +K+ KK RVWD +K LD+++
Sbjct: 169 KDEILQKNREEFFRRHMKAGEK-----SRSPKPDAQKEKGKKPRVWDLGNSNAKVLDYSN 223
Query: 265 PA-GGNGSNIEVEAADHGESMMDKEEV--------FSSDSESEEDEEVGKHNKPDAKKTG 315
A G+ VE D ++ DK + SD E+EE++ V +KP KK G
Sbjct: 224 SATNGSAEACPVEEFDPDMALGDKNREPGRLYDLEYESDDEAEEEKVVQNPSKPSVKKGG 283
Query: 316 WFSSMF--QSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------------- 353
+ + G +L + D++P L+ +KD L+ KNVAA
Sbjct: 284 LGGMFGMLKGLVGSKSLTREDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMG 343
Query: 354 ------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
++EALV+IL P+R +D+LRDV A+ R+PYV+ F GVNGVGKSTNLA
Sbjct: 344 TFTTVTSTVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVITFCGVNGVGKSTNLA 403
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEK 448
K+++WL+++ SV++AACDTFR+GAVEQLRTH RRL V ++EKGY K
Sbjct: 404 KISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGK 463
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVG
Sbjct: 464 DAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVG 523
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
N+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG
Sbjct: 524 NEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGT 583
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
GQ+Y DL+ LN K++V L+K
Sbjct: 584 GQTYCDLRSLNAKAVVAALMK 604
>gi|395846490|ref|XP_003795936.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Otolemur garnettii]
Length = 609
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 245/663 (36%), Positives = 344/663 (51%), Gaps = 129/663 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S + KP+ ++ + G+ K E+ N
Sbjct: 88 DFLRLLREAEESSKIRAPTAMKKFEDSDKAKKPVRSMIETRGEKPK---EKAKN------ 138
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
RG K E + + + +G+ G EN + K ++ K
Sbjct: 139 -------SKKRGAKKEGSDGPLATSKAVLAEKSGLPAGPENGELSKEELIRRKREEFIQK 191
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWD--DSPPESKLDFTDPAGGNGSNIE------- 274
G+ + + PK+K K RVW+ S + LD++ P S
Sbjct: 192 HGRGMEKSSKSMKSDAPKEKGKKAPRVWELGGSTNKEVLDYSTPTTNGTSEAALSEDINL 251
Query: 275 VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLD 331
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 252 IRGTGPGGQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLS 305
Query: 332 KADLEPALKALKDRLMTKNVAA--------------------------------MEEALV 359
+ D+E L ++D L+ KNVAA ++E+LV
Sbjct: 306 REDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLV 365
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AAC
Sbjct: 366 QILQPQRRVDMLRDIMDAQRCQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAAC 425
Query: 420 DTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGS 466
DTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 426 DTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGF 485
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S
Sbjct: 486 DVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHS 545
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+ P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 546 MAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAA 605
Query: 587 LLK 589
L+K
Sbjct: 606 LMK 608
>gi|410972315|ref|XP_003992605.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Felis catus]
Length = 611
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 248/670 (37%), Positives = 350/670 (52%), Gaps = 141/670 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K E+ N
Sbjct: 88 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPK---EKAKN------ 138
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-- 221
S +G K E+ + + + +G+ G EN ++SK + +R
Sbjct: 139 ------SKKNKGAKKESSDGPLVTSKAVPAEKSGLLVGPEN------GVELSKEELIRRK 186
Query: 222 -----NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE 274
K G+ + + PK+K K RVW +K LD++ P +
Sbjct: 187 REEFIQKHGRGMEKSSKSMKSDAPKEKGKKAPRVWALGGCANKEVLDYSTPTTNGAPEVA 246
Query: 275 -------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSI 324
+ G + D D S EDE +++ KP A K G M + +
Sbjct: 247 PPEDINLIRGTGPGGQLQD------LDCSSSEDEGATQNSTKPSATKGTLGGMFGMLKGL 300
Query: 325 AGKANLDKADLEPALKALKDRLMTKNVAA------------------------------- 353
G +L +AD+E L ++D L+ KNVAA
Sbjct: 301 VGSKSLSRADMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQ 360
Query: 354 -MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++
Sbjct: 361 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 420
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 421 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIA 480
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 481 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 540
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 541 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 600
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 601 AKAVVAALMK 610
>gi|324507951|gb|ADY43362.1| Signal recognition particle receptor subunit alpha [Ascaris suum]
Length = 657
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 254/670 (37%), Positives = 369/670 (55%), Gaps = 94/670 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ IF +GGL+LW C + G L I+ LI+ L++ER F +++ +K
Sbjct: 1 MIDLFTIFGKGGLVLW-CFQEGGQLFTDSINELIKEVLMQERGSSTLFKHNNV----YIK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD-----------YSDF 109
+ NE LVF+ VYQ + L Y D L++ +++ F ++Y D + +F
Sbjct: 56 YKLDNEFELVFLVVYQSAIQLSYGDQLISDVQKKFRDMYKNVLCDNKALYSSSPRTFDNF 115
Query: 110 DEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSG--------- 160
E F+++ + AR+ L + ++V + +K + ER + R+
Sbjct: 116 GEHFQKIYR--SARSMNLNRPEKVMRKFEESEKSKKTVA-SMIERPAERAAKLLKEKEQQ 172
Query: 161 GGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKL 220
+ K E + + + E E ++ + ++ SS D ++++
Sbjct: 173 QKMLKQQQPTKKSTASKKEKESALIISDE-ETAKQSATSSPPVRPSSPKSDADDEEMRRK 231
Query: 221 RNKGGKKTDTVVSK---GSNPDPKKKITKKNRVWDDSPPESK-----LDFTDPAGGNGSN 272
R + KK V +K S P+ K K+ RVW + +K LD++ G NG
Sbjct: 232 RAEFFKKKGGVATKKGGDSERVPEVKKGKQARVWGLAANGNKADIASLDYSKTDGENGDA 291
Query: 273 IEVEAADHGESMMDKEEVFSSDSESE---EDEEVG---------KHNKPDAKKT--GWFS 318
EVE M+++ F + E DE++ + K +A K+ GWFS
Sbjct: 292 PEVE---EDRRFMEEQMQFVGRLKGELPGLDEDLSEDEASEEENEEGKSNATKSGGGWFS 348
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------------- 353
+ F+S+ G L D++P L ++D L+ KNVAA
Sbjct: 349 A-FKSLVGNKKLTAEDIQPVLDKMRDTLIAKNVAAEPADKLCQSVAAKLEGKVVGSFSRV 407
Query: 354 -------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+ EALV++LTP+R +DILRDV AK + +PYV+VF GVNGVGKSTNLAK+ +W
Sbjct: 408 AGIVKESIREALVQLLTPKRRVDILRDVLEAKREHRPYVIVFCGVNGVGKSTNLAKITFW 467
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQE 460
L ++ V++AA DTFR+GAVEQLRTH + L V ++E+GY KDPA +A AI
Sbjct: 468 LNENGHRVLIAAGDTFRAGAVEQLRTHTKHLNSLHPNSVQLYEQGYGKDPAGLAAAAIAI 527
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A+ DVVLVDTAGRMQDNEPLMR+L+KLI +N PDLVLFVGEALVGNDAVDQL KFNQ
Sbjct: 528 ASERNIDVVLVDTAGRMQDNEPLMRSLAKLIRINEPDLVLFVGEALVGNDAVDQLVKFNQ 587
Query: 521 KLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
LAD ++ + +LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK LN
Sbjct: 588 ALADHAALGADARLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYKDLKNLN 647
Query: 580 VKSIVKTLLK 589
+ ++V +LLK
Sbjct: 648 ISAVVHSLLK 657
>gi|383848885|ref|XP_003700078.1| PREDICTED: signal recognition particle receptor subunit alpha
homolog isoform 1 [Megachile rotundata]
Length = 603
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 246/649 (37%), Positives = 356/649 (54%), Gaps = 106/649 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY--DPKRTDYSDFDEMFRQLRK 118
++FV YQ+IL L Y+D L + F + + + +++ + ++ F + +
Sbjct: 40 --------VMFVVAYQKILQLSYIDKFLNDIHLEFRDRFKNELEKSQWF-YNYEFSRNYE 90
Query: 119 EAEARAEELKKSK-QVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR-GR 176
A AE+ +++ ++ K M + + S ++ D DN + G+
Sbjct: 91 HVLAMAEQWARTQAKIPKQMRTFDE----------SQKSKKTVASMIERKDDKDNKKQGK 140
Query: 177 KLENGHSNVGN-VEIEESRVTGVANGKENTSSNIG-----AFDVSKLQKLRNKGGKKTDT 230
+ + ++N + ++++E + N + N + I A V QKL N+ K
Sbjct: 141 RKKGVNTNKDDQLKVQEVPKQDLVNNQINHNGEINEEILIANRVKLAQKLNNQKKK---- 196
Query: 231 VVSKGSNPDPKKKITKKNRVWD---DSPPESKLDFT-DPAGGNGSNIEVEAADHGESMMD 286
V K + P+K KK RVW+ + + L+ T D +G + + G+
Sbjct: 197 -VDKQKSQKPEKA-GKKPRVWELGGTTKDLATLERTKDKPEESGDYVAADTTLVGQMKGS 254
Query: 287 KEEVFSSDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
++ +E ++ ++ KP KKT SMF+S+ G +L D+ P L LKD
Sbjct: 255 IRDIEIESESEDESDQEIENPKPQVQKKTNSMFSMFKSLVGNKSLKHEDMAPVLDKLKDH 314
Query: 346 LMTKNVAA--------------------------------MEEALVRILTPRRSIDILRD 373
L+TKNVAA + +ALV+IL+P+R +DILRD
Sbjct: 315 LITKNVAAEIAQKLCDSVGVKLEGKVLGTFDSVSSTVKATLTDALVQILSPKRRVDILRD 374
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
AK +PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH
Sbjct: 375 AMEAKRNNRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRTH 434
Query: 434 ARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDN 480
R L V ++EKGY KD A +A EAI+ A + DVVLVDTAGRMQDN
Sbjct: 435 MRHLNALHPPEKHGNMSMVQLYEKGYGKDAAGIAMEAIRFAKDSRFDVVLVDTAGRMQDN 494
Query: 481 EPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLT 540
EPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +IDGI+LT
Sbjct: 495 EPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADHSQSTNPHIIDGIVLT 554
Query: 541 KFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
KFDTIDDKVGAA+SM Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 555 KFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 603
>gi|338726501|ref|XP_003365340.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 2 [Equus caballus]
Length = 610
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/664 (37%), Positives = 347/664 (52%), Gaps = 130/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + G
Sbjct: 88 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKTKNSKKNKGAKK 147
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVT-GVANGKENTSSNIGAFDVSKLQKLRN 222
DG L G + V E+S ++ G NG E + + + +
Sbjct: 148 EGSDG--------PLATGKA----VPAEKSGLSVGPENGVELSKEELIRRKREEFIQKHG 195
Query: 223 KGGKKTDTVVSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE------ 274
KG +K+ G + PK K K RVW S + LD++ P +
Sbjct: 196 KGMEKS----KPGKSDAPKDKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEVAPPEDIS 251
Query: 275 -VEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 252 LIRGTGPGGQLQD------LDCSSSDDEGATQNSTKPSATKGTLGGMFGMLKGLVGSKSL 305
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 306 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 365
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 366 VQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 425
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTHARRL V +FEKGY KD A +A EAI A G
Sbjct: 426 CDTFRAGAVEQLRTHARRLSALHPPENHGGRTMVYLFEKGYGKDAAGIAMEAIAFARNQG 485
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 486 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 545
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 546 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 605
Query: 586 TLLK 589
L+K
Sbjct: 606 ALMK 609
>gi|193206261|ref|NP_741303.2| Protein F38A1.8 [Caenorhabditis elegans]
gi|373253931|emb|CCD63963.1| Protein F38A1.8 [Caenorhabditis elegans]
Length = 625
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 250/649 (38%), Positives = 357/649 (55%), Gaps = 86/649 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IFT+GG+ LW +E + + LI+ L+EER + YT+K
Sbjct: 1 MIELFSIFTKGGVCLWNYQEGDYNFTEAINNELIKGTLMEERGNSGQKKVGN----YTMK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF-----------SEIYDPKRTDYSDF 109
+ NE ++F+ +YQ I++L Y + LL ++ SF + + P Y +F
Sbjct: 57 FQLDNEYNVIFLVIYQTIVNLNYAEKLLNLVVDSFRGEFSENLREETALTTPPSNIYGNF 116
Query: 110 DEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGD 169
DE F ++ EA A + + + K K + R ++ SA +
Sbjct: 117 DETFHEVLSEAAKSARATENTVKKPKTFQESAKSQKTIDSLIVSRPGQKNAEKSAKN--- 173
Query: 170 SDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTD 229
++ + +E+ EES T N++S G+ D L++ K +
Sbjct: 174 AEKTPKKPVESA---------EESSATDY-----NSASPPGSPDEEVLRRRDQMFKKMSG 219
Query: 230 TVVSKG----SNPDPKKKITKKNRVWDDS--PPESK-LDFTDPAGGNGSNIEVEAADHGE 282
KG ++P PK K+ RVW S P + K LD +DP + + + E E
Sbjct: 220 NTKKKGPEEPTSPKPK---GKQARVWALSGKPADVKNLDRSDPKENDENAADEEKNRFVE 276
Query: 283 SMMDKEEVFSSDSESEEDEEVGKHNKPDA----KKTGWFSSMFQSIAGKANLDKADLEPA 338
SM ++ D +S ++ + + D + GWFS M + + G+ L DL P
Sbjct: 277 SMKEQIGTLKGDLKSLQESDDEDEDDNDQQVVKQSGGWFS-MIKGLVGEKKLSAEDLNPL 335
Query: 339 LKALKDRLMTKNVA--------------------------------AMEEALVRILTPRR 366
++ +++ L+ KNVA A+ E+LV++LTP+
Sbjct: 336 IEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNFSRVAQEVKTAVRESLVQLLTPKH 395
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
+DILRDV AK +PYV+VF GVNGVGKSTNLAK+ +WL ++K V++AA DTFR+GA
Sbjct: 396 RVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENKHRVLIAAGDTFRAGA 455
Query: 427 VEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDN 480
VEQLRTHAR L V + E+GY KDPA +A AI++A DVVLVDTAGRMQDN
Sbjct: 456 VEQLRTHARYLNDLHKNSVLLHEQGYGKDPAGLAAAAIKKAAEQDFDVVLVDTAGRMQDN 515
Query: 481 EPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILL 539
EPLMR L+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LA+ +S P+LIDGI+L
Sbjct: 516 EPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHASPGQKPRLIDGIVL 575
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
TKFDTIDDKVGAA+SM Y++G P++FVGCGQ+Y+DL+ LNV ++V +LL
Sbjct: 576 TKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYSDLRNLNVGAVVHSLL 624
>gi|334330659|ref|XP_003341388.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Monodelphis domestica]
Length = 606
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/659 (36%), Positives = 337/659 (51%), Gaps = 124/659 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + +S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQHSALSLLNGTFDFHS 87
Query: 112 MFRQLRKEAEARA-----------EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSG 160
F L +EAE + E+ +K+K+ + M ER ++
Sbjct: 88 DFMHLLREAEESSKIRAPTAMKKFEDSEKAKKTVRSM--------------IERPKEKAK 133
Query: 161 GGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKL 220
N + G N + G ++ GV KE K ++
Sbjct: 134 SNKKNKGAKKEGSEGSSSANKGAPTGKPDLPTGPGDGVELSKEELMRK-------KREEF 186
Query: 221 RNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-DSPPESKLDFTDPA-GGNGSNIEVEAA 278
K G+ + + PK+K K RVW LD++ P G E
Sbjct: 187 MQKHGRGAEKSSKSSKSDAPKEKGKKAPRVWALGGSANEALDYSPPTTNGTPETTLPEDI 246
Query: 279 DHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKADL 335
+ ++ D S +DE V +++ KP A K G M + + G +L + D+
Sbjct: 247 NLIRGTQAGGQLQDLDCSSSDDEGVTQNSAKPSASKGALGGMFGMLKGLVGSKSLSREDM 306
Query: 336 EPALKALKDRLMTKNVAA--------------------------------MEEALVRILT 363
E L ++D L+ KNVAA ++E+LV+IL
Sbjct: 307 ESVLDKMRDHLIAKNVAADIALQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQ 366
Query: 364 PRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR
Sbjct: 367 PQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENNFSVLIAACDTFR 426
Query: 424 SGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+GAVEQLRTH RRL V +FEKGY KD A +A EAI A DVVL
Sbjct: 427 AGAVEQLRTHTRRLSALHPPENHGGRTMVHLFEKGYGKDAAGIAMEAISFARNQAFDVVL 486
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S +
Sbjct: 487 VDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQT 546
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y+DL+ LN K++V L+K
Sbjct: 547 PRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYSDLRSLNAKAVVAALMK 605
>gi|326933220|ref|XP_003212705.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Meleagris gallopavo]
Length = 661
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 251/622 (40%), Positives = 344/622 (55%), Gaps = 88/622 (14%)
Query: 38 LLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSE 97
LLEER G SF ++ A TLK+ N+ LVFV +Q+IL L YVD L+ + + F +
Sbjct: 57 LLEERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRD 112
Query: 98 IYDPKRTDYS------------DFDEMFRQLRKEAEARAEELKKSKQVTKP-MNNLKKQG 144
Y R ++ DF + F +L +EAE +S +V P + +Q
Sbjct: 113 KY---RNEFQQKGALGILNGTFDFKDDFLRLLREAE-------ESSKVRAPTVMKTFEQS 162
Query: 145 GQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKEN 204
+ QK R + ++ + E + + + +E
Sbjct: 163 MKSQKTVKCMIETRGEKPKEKVKNKKNKGSKKEGNEAVTVSSKAAPGEKQSSATGDKEEL 222
Query: 205 TSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFT 263
T I + + K K G+K+ SK S PD +K+ KK RVWD +K LD++
Sbjct: 223 TKDEILQKNREEFFKRHMKAGEKS----SKSSKPDAQKEKGKKPRVWDLGNSNAKVLDYS 278
Query: 264 DPA-GGNGSNIEVEAADHGESMMDKEE--------VFSSDSESEEDEEVGKHNKPDAKKT 314
+ GN VE D ++ D+ + SD E+EE++ + +KP KK
Sbjct: 279 NSTTNGNSEASPVEEFDPDMALRDRNREPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKG 338
Query: 315 GWFSSMF--QSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------- 353
G + + G +L + D++P L+ +KD L+ KNVAA
Sbjct: 339 GLGGMFGMLKGLVGSKSLTRQDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVM 398
Query: 354 -------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNL 400
++EALV+IL P+R +D+LRDV A+ R+PYVV F GVNGVGKSTNL
Sbjct: 399 GTFTTVTSTVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNL 458
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYE 447
AK+++WL+++ SV++AACDTFR+GAVEQLRTH RRL V ++EKGY
Sbjct: 459 AKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRSMVQLYEKGYG 518
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
KD A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALV
Sbjct: 519 KDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALV 578
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG
Sbjct: 579 GNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVG 638
Query: 568 CGQSYTDLKKLNVKSIVKTLLK 589
GQ+Y DL+ LN K++V L+K
Sbjct: 639 TGQTYCDLRSLNAKAVVAALMK 660
>gi|395333360|gb|EJF65737.1| signal recognition particle binding protein [Dichomitus squalens
LYAD-421 SS1]
Length = 667
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/699 (35%), Positives = 356/699 (50%), Gaps = 145/699 (20%)
Query: 1 MLEQLLIFTRGGLILWT-----CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG++LW+ A SP+++L+R L+E RS + D
Sbjct: 1 MLDHCSISHKGGVVLWSRSFTPAASHTAASSSSPVNSLVREALIEGRSSDGKYEKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY---------------- 99
Y +KWTF N+L L+FV YQRIL L YVD+LL +K F +++
Sbjct: 57 GYAVKWTFVNDLELIFVVAYQRILQLTYVDELLLALKTLFIKLFQPFLATFVASLHVTST 116
Query: 100 -------DPK-----RTDYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQL 147
DP + + +D +F +L + E +A + ++++ V P L
Sbjct: 117 TKLSSSGDPSFLWNFQKAFEGWDAVFDKLLRGLEDKAAQERRTRVVHAPRPALDVT---- 172
Query: 148 QKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIE-ESRVTGVANGKENTS 206
+DD D+ V N +++ E ++ +N
Sbjct: 173 ---------------PPSDDVDT-----------VPAVSNADVQDEEQIARNVQALKNRL 206
Query: 207 SNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKI-TKKNRVW-DDSPPES---KLD 261
G + + + G + S P K+K K R W +++P ES LD
Sbjct: 207 RGRGGQAGRRGRSRTDVGSGRESVPGSDSETPTSKRKARAKTQRKWGNEAPTESDMVSLD 266
Query: 262 FTDPAGGNGSNIE------VEAADHGESMMD-----KEEVFSSDSESEEDEEV------- 303
++ + G V++A G D K+ F S E D+ +
Sbjct: 267 YSYDSASEGRQGTLDVSSLVDSASLGTRTQDGLYEVKDWEFLSQGEKNADDVIAEVLKKG 326
Query: 304 GKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------- 352
G+ KP + G S+F + G L + DL+P L+A+K LM KNVA
Sbjct: 327 GQEAKPASSSLGALGSIFARLTGSKVLTEKDLKPVLEAMKQHLMKKNVAKEISEKVCEDV 386
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVH-------AAKEQRKPY 384
A+ ++ RILTP+ S D+L + AA +QR+ Y
Sbjct: 387 GQSLVGKKVGGFQTTTSAVRQALANSITRILTPKTSTDLLLSIRTKLSTPVAASQQRQTY 446
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------- 437
+ FVGVNGVGKSTNL+KV +WL+Q+ V++AACDTFRSGAVEQLR H R L
Sbjct: 447 SITFVGVNGVGKSTNLSKVCFWLIQNGFRVLIAACDTFRSGAVEQLRVHVRNLGMLGVDG 506
Query: 438 ------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
+V ++E+GY KD A +AKEAI A N DVVL+DTAGRMQDNEPLMRAL+KL+
Sbjct: 507 ATNSKGRVELYERGYGKDAAGIAKEAISYARDNDFDVVLIDTAGRMQDNEPLMRALAKLV 566
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL--IDGILLTKFDTIDDKV 549
NNPD ++FVGEALVGN+AVDQL+KF++ L D S++ Q IDG+L+TK+DT+DDKV
Sbjct: 567 ATNNPDKIIFVGEALVGNEAVDQLTKFDRALRDFSAASGGQERGIDGMLVTKWDTVDDKV 626
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GAALSM YV+G P++FVGCGQ+YTDL++L V ++V+ +L
Sbjct: 627 GAALSMTYVTGQPIIFVGCGQTYTDLRQLRVANVVQAIL 665
>gi|331241410|ref|XP_003333353.1| hypothetical protein PGTG_15137 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312343|gb|EFP88934.1| hypothetical protein PGTG_15137 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 691
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 259/684 (37%), Positives = 348/684 (50%), Gaps = 124/684 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLL-EERSGLASFNYDSAGAAYTL 59
ML+ + IF RGGL+LW+ + SPI TLI L+ E+ SGL G+ Y+L
Sbjct: 37 MLDHVHIFHRGGLVLWSKSFVPTP---SPIRTLIGDGLIGEQSSGLNDLMVMQIGS-YSL 92
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKE 119
+W F NE GL+FV YQRIL L Y+ DLL MK F+ +Y S D F
Sbjct: 93 QWNFSNEFGLIFVVAYQRILQLTYITDLLESMKSLFTSLYG------SILDTTFNSWIVP 146
Query: 120 AEARAEELKK-SKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKL 178
E K K + + L K ER S+R GG D + + R
Sbjct: 147 ETGLTEGFKDLFKGWDQSFHKLLKD--------IERMSDRRRGGI--DFQKTSGLDKRAA 196
Query: 179 ENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKK-------TDTV 231
+ V+ ++ A E + NI A K +K NK TDT
Sbjct: 197 QRQAEEQQLVDDQKPTALTTATDAETIARNIAAL---KARKKPNKSSTSRATSRSGTDTD 253
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADH---GESMMDKE 288
+ P K K R WD+ ++ D A + S + D + +DK
Sbjct: 254 TAPAGKPQTTNK--KTARKWDNG----RITANDIAEYDFSEKDAHLDDSKTLSSNFIDKM 307
Query: 289 EVFSSDSESEEDEEVGKHNKPDAK------KTGWFSSMFQSI-------AGKANLDKADL 335
+ + + + + ++PD K + FS + SI +G L + D+
Sbjct: 308 SMGTRNQKGLYEVADFDRSRPDQKSEEDKSQPTLFSKIISSIPIFGGQKSGPITLREEDV 367
Query: 336 EPALKALKDRLMTKNVA----------------------------------AMEEALVRI 361
+P ++ ++ +LM KNVA ++E +L +I
Sbjct: 368 KPMIEQIQLQLMKKNVAREIAVRICERIQVELIGQKLSDRSTTALKKLINHSLEISLTKI 427
Query: 362 LTPRRSIDILRDVHAAKEQRK--------------PYVVVFVGVNGVGKSTNLAKVAYWL 407
LTP+ S+DIL D+H ++++K PYV+ FVGVNGVGKSTNL+KVA+WL
Sbjct: 428 LTPKTSVDILADIHQKQDRQKQMNLSQLSGGTSTAPYVMTFVGVNGVGKSTNLSKVAFWL 487
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL--------------------QVPIFEKGYE 447
LQ+++ V++AACDTFRSGAVEQLRTH R L + +FEKGY
Sbjct: 488 LQNRLRVLIAACDTFRSGAVEQLRTHVRNLGKLDGAIEHQSPNSNHEERKMIELFEKGYG 547
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
KD A +AKEAIQ A +G DVVL+DTAGRMQDNEPLMRAL KL+ +N PD +LFVGEALV
Sbjct: 548 KDAAGIAKEAIQYAKNDGFDVVLIDTAGRMQDNEPLMRALGKLVVVNQPDKILFVGEALV 607
Query: 508 GNDAVDQLSKFNQKLADLSS--SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
GN+AVDQL KF++ L S S P+ IDGI+LTKFDTIDDKVGAALSM Y P++F
Sbjct: 608 GNEAVDQLGKFDKSLKTFSGLDSHLPRGIDGIILTKFDTIDDKVGAALSMTYTINQPILF 667
Query: 566 VGCGQSYTDLKKLNVKSIVKTLLK 589
VG GQ+YTDLK L V +V L++
Sbjct: 668 VGTGQTYTDLKNLKVNHVVNALMR 691
>gi|417411845|gb|JAA52344.1| Putative signal recognition particle receptor alpha subunit,
partial [Desmodus rotundus]
Length = 597
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 246/625 (39%), Positives = 337/625 (53%), Gaps = 104/625 (16%)
Query: 40 EERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ER G SF ++ A TLK+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 1 QERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 56
Query: 100 DPKRTDYS---------DFDEMFRQLRKEAEARAE-----ELKK---SKQVTKPMNNLKK 142
+ S DF F QL +EAE ++ +KK S++ KP+ ++ +
Sbjct: 57 RTEIQQQSALSLLNGTFDFQNDFLQLLREAEESSKVRVPTTMKKYEDSEKAKKPVRSMIE 116
Query: 143 QGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGK 202
G+ K + N+ +D + S + E + G NG
Sbjct: 117 TRGEKPKEKAKNKKNKGAKKEGSD-----------VPLATSKTASAE----KSVGAENGV 161
Query: 203 ENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPD-PKKKITKKNRVWDDSPPESK-- 259
E + + + + KG +K+ K S D PK+K K RVW +K
Sbjct: 162 ELSKEELIRRKREEFIQKHGKGMEKS----GKSSKSDAPKEKGKKAPRVWALGGCVNKED 217
Query: 260 LDFTDPAGGNGSNIE-------VEAADHGESMMDKEEVFSSDSESEEDEEVGKH-NKPDA 311
LD++ P + + G + D D S +DE ++ +KP A
Sbjct: 218 LDYSAPTTNGAPEVVPPEDINLIRGTGPGRQLQD------LDCSSSDDEGAAQNPSKPSA 271
Query: 312 KK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------------- 353
K G M + + G +L + D+E L ++D L+ KNVAA
Sbjct: 272 TKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEG 331
Query: 354 ----------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKS
Sbjct: 332 KVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKS 391
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEK 444
TNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEK
Sbjct: 392 TNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPESHGGRTMVHLFEK 451
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGE
Sbjct: 452 GYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGE 511
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVGN+AVDQL KFN+ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++
Sbjct: 512 ALVGNEAVDQLVKFNRALADHSMSQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIV 571
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLLK 589
FVG GQ+Y DL+ LN K++V L+K
Sbjct: 572 FVGTGQTYCDLRSLNAKAVVAALMK 596
>gi|353231553|emb|CCD77971.1| putative signal recognition particle receptor alpha subunit
(sr-alpha) [Schistosoma mansoni]
Length = 659
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 250/686 (36%), Positives = 351/686 (51%), Gaps = 124/686 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ +I T+GG+ LW + + S I+T ++S +LEE +G + F DS +K
Sbjct: 1 MLDFFVIITKGGIRLWCFPGSIDIFRLS-INTFLKSLILEENAGRSPFVCDSRA----MK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD------YSDFDEMFR 114
+ NE L+FVA YQ +L L YVD L + F + Y + + Y +F +++
Sbjct: 56 FYMDNEFNLLFVAAYQNVLQLNYVDKFLTDIALEFRDKYKNRLVNHDITGSYDEFLPIYQ 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
K E +L+K + + + K + +G N +++
Sbjct: 116 ATLKRTEDEFRDLRKGAKQMRKFEDSDKSKKTVASMIVRKGKNTEV-----------DVK 164
Query: 175 GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSK 234
+ S V ++EE V G+ ++N F KG KK+ S
Sbjct: 165 ETPIAQKESLVPESKLEELPVNGIDTFEQNRLRLAAKF----------KGSKKSKEPKSP 214
Query: 235 GSNP--DPKKKITKKNRVWDDSPP---ESKLDF-----TDPAGG-----NGSNIEVEAAD 279
+P P K K++R WD+S + LDF T+ G N S E+E
Sbjct: 215 SLSPMQKPNGKKIKESRRWDNSATGEEAAALDFSGMNHTESTGNQKSDYNFSATEIETLS 274
Query: 280 HGESMM--DKEEV------------------------FSSDSESEEDEEVGKHNKPDAKK 313
M D +EV S+DS+ ++ K K
Sbjct: 275 RLRGTMKDDLDEVNVSSGDEDVDSLELKENESVEQNGLSTDSQLQKSSLDNKQTKSGYLN 334
Query: 314 TGWFSSMFQSI-----AGKANLDKADLEPALKALKDRLMTKNVA---------------- 352
G+ SS+ + + +G+ L + D+ P L+ L++RL+ KNVA
Sbjct: 335 GGFASSLLRGLRITGGSGRV-LTREDIAPCLEQLRERLVGKNVAMSIADRVCSNVADRLV 393
Query: 353 ----------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGK 396
++EE RIL R +D+LRD A+ Q +PY +VF GVNGVGK
Sbjct: 394 GTSLGTFERIYPRVRASLEEVCSRILVSGRRVDVLRDALDARTQGRPYSIVFCGVNGVGK 453
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFE 443
STNLAK+A+WL++ V++AACDTFRSGAVEQLRTH R+L V ++E
Sbjct: 454 STNLAKIAFWLIEKNFRVLIAACDTFRSGAVEQLRTHVRKLNYIHPADQHGGQTMVELYE 513
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
+GY +D A +A+ AI A DVVLVDTAGRMQDNEPLMRAL+ LI N PDLVLFVG
Sbjct: 514 QGYGRDAASIARSAINYARDRHFDVVLVDTAGRMQDNEPLMRALASLIQTNQPDLVLFVG 573
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVGN+AVDQL KFNQ LAD S S P+ IDGI+LTKFDTIDDKVGAA+SM +S P+
Sbjct: 574 EALVGNEAVDQLVKFNQSLADHSYSDRPRCIDGIVLTKFDTIDDKVGAAISMACISNQPI 633
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLLK 589
+FVG GQ+Y+DL++L+V ++VK L+K
Sbjct: 634 VFVGTGQTYSDLRQLSVNAVVKALMK 659
>gi|71005446|ref|XP_757389.1| hypothetical protein UM01242.1 [Ustilago maydis 521]
gi|46096616|gb|EAK81849.1| hypothetical protein UM01242.1 [Ustilago maydis 521]
Length = 705
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 260/723 (35%), Positives = 374/723 (51%), Gaps = 153/723 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ +F + GL+LW+ K AL G+ P+++LI+ LE+R+ F D
Sbjct: 1 MLDHFTVFAKNGLVLWS-KTFSPALSGADASTNPVNSLIKQAFLEQRTADQKFEKD---- 55
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--KRTDYSDFDEMF 113
YTL+WTF NEL L FV VYQRIL L Y+D+LL ++ F++++ P ++ S +
Sbjct: 56 GYTLRWTFANELDLTFVVVYQRILQLSYIDELLDTIRTLFTDLFAPFVRKLTLSSKSAIS 115
Query: 114 ----RQLRKEAEARAEELKKSKQ----VTKPMNNLKKQGGQLQKGGF---ERGSNRSGGG 162
R + AR E K+ T+ + NL+K Q ++ G +G+
Sbjct: 116 SGASRVITLSESARLEFAAALKEWDDIFTRTLRNLEKAAAQSKRKGVLGERKGATNQAQT 175
Query: 163 SANDDGDS--DNMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNIGAF 212
+A+ D +S + +++++ +VE +SR+ V GK+ ++S I A
Sbjct: 176 TASSDKESGQNTPISKEVKDSADISKSVEALKSRLKLEASPGGRRVVRGKK-SASGISA- 233
Query: 213 DVSKLQKLRNKGGKKTDTVVSKGSNPDP---KKKITKKNRVWDDSPPESK-----LDF-- 262
+ GG T + P K K TK+ R WD S S LDF
Sbjct: 234 ---------SNGGSAPGTPGNASGTESPSGKKAKATKEMRKWDGSRSVSAQQVAALDFSG 284
Query: 263 -TDPAGGNGSNIE----------------VEAADHGESMMDKEEVFSSDSESEEDEEVGK 305
T+ +G NG++++ E AD E D+E+ + + ++DE+ G
Sbjct: 285 ATEKSGDNGADLDSWIDEKSMGKKRSDGVYEIADVLEEEEDEEDEDEDEEDEDKDEDAGF 344
Query: 306 HNKPDAKKTGWFSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA-- 353
+ AK G+ S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 345 SST--AKSAGFLSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADV 402
Query: 354 ------------------------------MEEALVRILTPRRSIDILRDVHAAKEQR-- 381
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 403 AQRLCDSVERNLVGKNLGSFGSVKVEVKKALEEAITRILTPKSSTDILLEI-ATKRQRIT 461
Query: 382 --------------------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDT
Sbjct: 462 AASSLALATSAKDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDT 521
Query: 422 FRSGAVEQLRTHARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
FR+GAVEQLR H R L + ++E+GY KD A +AK+A+ A G
Sbjct: 522 FRAGAVEQLRVHVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGF 581
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVL+DTAGRMQDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S
Sbjct: 582 DVVLIDTAGRMQDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFS 641
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
NP+ +DG LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V
Sbjct: 642 GVSNPRGLDGSLLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNA 701
Query: 587 LLK 589
LLK
Sbjct: 702 LLK 704
>gi|410909654|ref|XP_003968305.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 2 [Takifugu rubripes]
Length = 618
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 256/672 (38%), Positives = 366/672 (54%), Gaps = 138/672 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+
Sbjct: 1 MLDFFTIFSKGGIVLWCFQGAGVTQSFTG-PVNALIRSVILQ------------------ 41
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--------KRTDYS--- 107
+G +Q+IL L YVD L+ ++ F + Y K ++S
Sbjct: 42 --------VG------FQKILTLTYVDKLIDDIQLHFRDRYKNELVQKGALKFLNHSFQF 87
Query: 108 --DFDEMFRQLRKEAEARA-------EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNR 158
DF ++ R+ ++AR+ +E +KS++ K M K +GG + + +
Sbjct: 88 ENDFIKLLREAEYSSKARSPAHMRTFKESEKSQKTVKSMIETKGGDKGKDQGGKKNKNTK 147
Query: 159 SGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
G A +LE + + ++++ V NG + +S +Q
Sbjct: 148 KEGEYA------------ELEKAEQHKSSFSVQKT----VENGNQGLTSE------EIMQ 185
Query: 219 KLRNKGGKK--TDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSNIEV 275
K R K K T V +P P+K KK RVWD+ ++ LD+++ G +N
Sbjct: 186 KKREKFFSKRMVTTAVKPSKSPKPQKPRGKKMRVWDNGETSAENLDYSERNGDGSANDGD 245
Query: 276 EAADHGESMMDKE---EVFSSDSESEEDEE-------VGKHNKPDAKKTGWFSSM---FQ 322
+ A SM + ++ S D +S E+EE V + +KP++KK+G F M +
Sbjct: 246 QEAQSDPSMQLRSMEGDLLSVDYDSSEEEEMDEERVVVSETSKPNSKKSGGFGGMFGMLK 305
Query: 323 SIAGKANLDKADLEPALKALKDRLMTKNVAA----------------------------- 353
+ G NL + D+E L+ +KD L+ KNVAA
Sbjct: 306 GLVGSKNLTREDMESVLEKMKDHLIAKNVAADISAQLCDSVAKKLEGKVMGTFTTVASTV 365
Query: 354 ---MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
++++LV IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKSTNLAK+++WL+++
Sbjct: 366 KQALQDSLVHILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAKISFWLIEN 425
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEA 457
+V++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EA
Sbjct: 426 GFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPERHGGRPMVHLYEKGYGKDAAGIAMEA 485
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
I A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL K
Sbjct: 486 IAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVK 545
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DL+
Sbjct: 546 FNQALADHSMSDRPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRN 605
Query: 578 LNVKSIVKTLLK 589
LN +++V L+K
Sbjct: 606 LNARAVVSALMK 617
>gi|391339873|ref|XP_003744271.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Metaseiulus occidentalis]
Length = 580
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 244/634 (38%), Positives = 356/634 (56%), Gaps = 99/634 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++ G++LW + G A S ++ LIR +L+ RS +++D L+
Sbjct: 1 MLDLFAIFSKSGIVLWCFQSTGEAFT-SAVNALIREIILQGRSFKEEYHHDQ----LALR 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP---KRTDYSDF--DEMFRQ 115
+ NE LVFV YQ+IL L YVD L ++ F + Y R +++F D +++
Sbjct: 56 FRMDNEFDLVFVTAYQKILQLSYVDKFLDDIQLEFRDKYRQDLESRNFFANFNLDGEYQK 115
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRG 175
L + AEA +E + K M + + E ++ + D ++ +
Sbjct: 116 LLRRAEAYGKENRAPK-----MRSFQ-----------ESQKSKKTMAALIDKKETQKVFE 159
Query: 176 RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG 235
+ E V N E +E +A K QKL ++ KK S+
Sbjct: 160 ARKEPARP-VYNAEDDE-----IAKNK---------------QKLIDRMTKKKAD--SRK 196
Query: 236 SNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSD 294
S P K K KK RVWD++ ++ LD+ + + A G++
Sbjct: 197 SPPSNKDKKGKKARVWDNAGQTTEGLDYCE------DRFMPQTAWVGQA----RGDIKDI 246
Query: 295 SESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA- 353
+++ + +++ AK T MF+ + G+ L +AD++P L+ L++ L+TKNVAA
Sbjct: 247 DYDDDESDEEDYDQRAAKNTSGVFGMFKGLVGQKALTRADVDPVLEKLREHLITKNVAAE 306
Query: 354 -------------------------------MEEALVRILTPRRSIDILRDVHAAKEQRK 382
+ EALV++L+P+R +D+LRDV + Q +
Sbjct: 307 VASSLCDSVALQMEGQVLGTFQRVASVIRDTLSEALVQVLSPKRRMDLLRDVLDCRRQGR 366
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----- 437
PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH R L
Sbjct: 367 PYVIAFCGVNGVGKSTNLAKICFWLMENDCKVLIAACDTFRAGAVEQLRTHVRHLDNLHP 426
Query: 438 -QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+V ++E+GY KD A +A EAI A + DVVLVDTAGRMQDNEPLMRAL+KL+ +N P
Sbjct: 427 GKVQLYERGYGKDAAGIAAEAIGFARDSRFDVVLVDTAGRMQDNEPLMRALAKLVVVNKP 486
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSM 555
DL+LFVGEALVGN+AVDQL++FN LAD S +P+LIDGI+L+KFDTIDDKVGAA+SM
Sbjct: 487 DLLLFVGEALVGNEAVDQLTRFNMALADHSKMQGSPRLIDGIVLSKFDTIDDKVGAAVSM 546
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
Y++G P++FVG GQ+Y DLK LN K++VK L+K
Sbjct: 547 SYITGQPIVFVGTGQTYVDLKALNPKAVVKALMK 580
>gi|56758718|gb|AAW27499.1| SJCHGC06360 protein [Schistosoma japonicum]
Length = 659
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 264/689 (38%), Positives = 368/689 (53%), Gaps = 130/689 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ +I T+GG+ LW + + S I+T ++S +LEE +G + F DS +K
Sbjct: 1 MLDFFVIITKGGIRLWCFPGSTDIFRLS-INTFLKSLILEENAGRSPFICDSRA----MK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD------YSDFDEMFR 114
+ NE L+FVA YQ++L L YVD L + F + Y K Y +F +++
Sbjct: 56 FYMDNEFNLLFVAAYQKVLQLNYVDKFLTDIALEFRDKYKNKLISHDITGSYEEFLPIYQ 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
K++E +E + NL+K Q++K FE S +S A+ M
Sbjct: 116 TTLKKSE---DEFR----------NLRKSVKQMRK--FE-DSEKSKKTVAS-------MI 152
Query: 175 GRKLENGHSNVGNVEI--EESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVV 232
RK +N S+V + + +ES VT +E NI F+ ++L KL K +
Sbjct: 153 VRKGKNSESDVKEITVAPKESVVTQ-PKSEEPPVDNIDTFEQNRL-KLAAKLKGSKKSKE 210
Query: 233 SKGSNPDPKKKI----TKKNRVWDDSPP---ESKLDF-----TDPAGG-----NGSNIEV 275
SK + P +K K++R WD++ + LDF T+ G N S E+
Sbjct: 211 SKSPSSSPMQKPNGKRVKESRRWDNAATGEEAAALDFSGINHTESTGNHKADYNFSATEI 270
Query: 276 EAADHGESMM--DKEEVFSS------------DSESEEDEEVGKHNKP-------DAKKT 314
E M D +EV S +SES E ++P + K+
Sbjct: 271 ETLSRLRGTMKDDLDEVHVSSDDEDLDVLEIDESESLEQSSFSTDSQPQKTPLKTEQTKS 330
Query: 315 GWFSSMFQS-------IAGKAN--LDKADLEPALKALKDRLMTKNVA------------- 352
G+ + F S IAG L + D+ P L+ L++RL++KNVA
Sbjct: 331 GYLNGGFASSLLRGLRIAGGTGRVLTQEDITPCLEQLRERLVSKNVAMSIAERVCSSVSD 390
Query: 353 -------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNG 393
++E+ RIL R +D+LRD A+ +PY +VF GVNG
Sbjct: 391 RLVGTSLGTFERIYPRVKASLEDVCSRILVSGRRVDVLRDALDARTPGRPYSIVFCGVNG 450
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VP 440
VGKSTNLAK+A+WL++ V++AACDTFRSGAVEQLRTH R+L V
Sbjct: 451 VGKSTNLAKIAFWLIEKNFRVLIAACDTFRSGAVEQLRTHVRKLNYIHPADQHGGQIMVE 510
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++E+GY +D A +A+ AI A DVVLVDTAGRMQDNEPLMRAL+ LI N PDLVL
Sbjct: 511 LYEQGYGRDAASIARSAINYARDRHFDVVLVDTAGRMQDNEPLMRALALLIQTNQPDLVL 570
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FVGEALVGN+AVDQL KFNQ LAD S S +P+ IDGI+LTKFDTIDDKVGAA+SM +S
Sbjct: 571 FVGEALVGNEAVDQLVKFNQSLADHSYSDHPRCIDGIVLTKFDTIDDKVGAAISMACISN 630
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++FVG GQ+Y+DL++L+V ++VK L+K
Sbjct: 631 QPIVFVGTGQTYSDLRQLSVNAVVKALMK 659
>gi|355721901|gb|AES07414.1| signal recognition particle receptor [Mustela putorius furo]
Length = 599
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 247/624 (39%), Positives = 338/624 (54%), Gaps = 101/624 (16%)
Query: 41 ERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD 100
ER G SF ++ A TLK+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 1 ERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYR 56
Query: 101 P---KRTDYS------DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGG 151
+R+ S DF F +L +EAE +S ++ P K + + K
Sbjct: 57 TEIQQRSALSLLNGTFDFQNDFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKP 109
Query: 152 FERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGA 211
R + G + + +G K E+ + + + +G+A G EN
Sbjct: 110 V-RSMIETRGEKPKEKAKNSKKKGAKKESSDGPLATSKAVPAEKSGLAVGPEN------G 162
Query: 212 FDVSKLQKLR-------NKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDF 262
++SK + +R K G+ + + PK+K K RVW +K LD+
Sbjct: 163 VELSKEELIRRKREEFIQKHGRGLEKSSKSMKSDAPKEKGKKAPRVWALGGCANKEILDY 222
Query: 263 TDPAGGNGSNIEVEAAD--------HGESMMDKEEVFSSDSESEEDEEVGKHN--KPDAK 312
+ P NG+ + D G + D + S D+EV N KP A
Sbjct: 223 STPTT-NGAPEDAPPEDISLIRGTGPGGQLQDLDC-------SSSDDEVAAQNTTKPSAT 274
Query: 313 K--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA----------------- 353
K G M + + G +L + D+E L ++D L+ KNVAA
Sbjct: 275 KGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGK 334
Query: 354 ---------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKST 398
++E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKST
Sbjct: 335 VMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKST 394
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKG 445
NLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL V +FEKG
Sbjct: 395 NLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKG 454
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
Y KD A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEA
Sbjct: 455 YGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEA 514
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
LVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++F
Sbjct: 515 LVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVF 574
Query: 566 VGCGQSYTDLKKLNVKSIVKTLLK 589
VG GQ+Y DL+ LN K++V L+K
Sbjct: 575 VGTGQTYCDLRSLNAKAVVAALMK 598
>gi|348508205|ref|XP_003441645.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 2 [Oreochromis niloticus]
Length = 619
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 251/680 (36%), Positives = 357/680 (52%), Gaps = 153/680 (22%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+
Sbjct: 1 MLDFFTIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQ------------------ 41
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY------------ 106
+Q+IL L YVD + ++ F + Y +
Sbjct: 42 --------------VGFQKILTLTYVDKFINDVQLRFRDRYKNELEQKGALKLLNNSFEF 87
Query: 107 -SDFDEMFRQLRKEAEARA-------EELKKSKQVTKPMNNLKKQGG-----QLQKGGFE 153
+DF+ + + ++AR E+ KS++ K M ++ +GG Q K
Sbjct: 88 ENDFNMLLSVAEESSKARGPAGMRTFEQSGKSQKTVKSM--IETKGGDKGKEQGGKKNKN 145
Query: 154 RGSNRSGGGSANDDGDSDNMRGRKL-ENGHSNVGNVEIEESRVTGVANGKENTSSNIGAF 212
A D D + G+K+ ENG+ ++ EI
Sbjct: 146 AKKEAPAAQPAKGDQDKASPSGQKMVENGNQSLTAEEI---------------------- 183
Query: 213 DVSKLQKLRNKGGKKTDTVVSK--GSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGN 269
LQK R + +K S+ +P P+K K+NRVW+ ++ LD++D GN
Sbjct: 184 ----LQKNREEFFRKHRPGASEKPSKSPKPQKPKGKQNRVWNTGGRSTRDLDYSD-KNGN 238
Query: 270 GS------NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKH---------NKPDAKKT 314
GS N+E + + K ++ S + ES ++EE+ + KP +KK
Sbjct: 239 GSPNGAEQNLEAQFDPEMQPASMKGDLLSVEYESSDEEEMEEEDEEVVVRETTKPSSKKG 298
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------- 353
G M + + G +L + D+EP L+ +KD L+ KNVAA
Sbjct: 299 GGLFGMLKGLVGSKSLTREDMEPVLEKMKDHLIAKNVAADIASQLCDSVAKKLEGKVMGT 358
Query: 354 -----------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
++++LV+IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKSTNLAK
Sbjct: 359 FTTVASTVKQALQDSLVQILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAK 418
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKD 449
+++WL+++ +V++AACDTFR+GAVEQLR H RRL V ++EKGY KD
Sbjct: 419 ISFWLIENGFTVLIAACDTFRAGAVEQLRIHQRRLNSLHPPEKHGGRPVVQLYEKGYGKD 478
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A +A EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN
Sbjct: 479 AAGIAMEAIAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGN 538
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
+AVDQL KFNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG G
Sbjct: 539 EAVDQLVKFNQALADHSMSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTG 598
Query: 570 QSYTDLKKLNVKSIVKTLLK 589
Q+Y DL+ LN +++V L+K
Sbjct: 599 QTYNDLRSLNARAVVSALMK 618
>gi|348573889|ref|XP_003472723.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Cavia porcellus]
Length = 609
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 247/657 (37%), Positives = 344/657 (52%), Gaps = 117/657 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV 231
+G K E + + + +G+ G EN + K ++ K G+ D
Sbjct: 140 KKKGAKKEGSDGPLAASKAPAAEKSGLPVGPENGELSKEELIRRKREEFIQKHGRGMDKS 199
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NIEVEAADH 280
+ PK+K K RVW+ +K LD++ P NG+ N+ +
Sbjct: 200 SKSMKSDAPKEKGKKAPRVWELGGCANKEVLDYSAPTT-NGTPEAALSEDINL-IRGTGP 257
Query: 281 GESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKADLEP 337
G + D D S EDE ++ KP A K G M + + G +L + D+E
Sbjct: 258 GGQLQDL------DCSSSEDEGATPNSTKPRAPKGTLGGMFGMLKGLVGSKSLSREDMES 311
Query: 338 ALKALKDRLMTKNVAA--------------------------------MEEALVRILTPR 365
L ++D L+ KNVAA ++E+LV+IL P+
Sbjct: 312 VLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQ 371
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR+G
Sbjct: 372 RRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAG 431
Query: 426 AVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
AVEQLRTH RRL V +FEKGY KD A +A EAI A G DVVLVD
Sbjct: 432 AVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIACARNQGFDVVLVD 491
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S + P+
Sbjct: 492 TAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPR 551
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 552 LIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 608
>gi|353235169|emb|CCA67186.1| related to SRP101-signal recognition particle receptor, alpha chain
[Piriformospora indica DSM 11827]
Length = 690
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 259/732 (35%), Positives = 363/732 (49%), Gaps = 188/732 (25%)
Query: 1 MLEQLLIFTRGGLILW------TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ I +GGL+LW T L + SP++ LIR L+E RS + D
Sbjct: 1 MLDNCTISHKGGLVLWSRSFTPTAATLSRS-NASPVNNLIREALIEGRSSEDRYEKD--- 56
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY-------- 106
Y ++WT N+L L+FV YQRIL L YV+DLL +K F ++Y P T +
Sbjct: 57 -GYAVRWTLANDLELIFVVAYQRILQLSYVEDLLTAIKTLFIKLYAPFLTKFVASLHAQA 115
Query: 107 --------------------SDFDEMFRQLRKEAEARAEELKK--SKQVTKPMNNLKKQG 144
D+D++F ++ +E E +A + ++ ++Q+T
Sbjct: 116 NAAPTEVADASPSWDFASAFKDWDKVFDKVLRELEQKANQERRLRTRQLT---------- 165
Query: 145 GQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESR-VTGVANGKE 203
G G++ SG S N++ H G+ ++ T +G+E
Sbjct: 166 -----GSTALGASMSGNESFNEE--------------HPERGSGATTPAKDATSPLDGQE 206
Query: 204 NTSSNIGAFDVSKLQKLRNKGGKKT--------------DTVVSKGSNPDPKKKITKKNR 249
+ NI K R KG T D+ VSK + + K R
Sbjct: 207 -IAKNIAHL------KTRMKGRNSTSGKKGKGGGAGSGSDSDVSKRQS---SLRGAKSKR 256
Query: 250 VWDDSPPE----SKLDFTD--PAGGNGSNIEVEAADHGESMMDKEEV-------FSSDSE 296
W D P S LDF+ P+ + + D + K+ V FS +
Sbjct: 257 TWGDVVPTEDDMSALDFSTDKPSDLPSAGVLDTLVDEKSRGVKKDGVYEIRDWEFSKQAS 316
Query: 297 SEEDEEVGKHNKPDAKKT---------------GWFSSMFQSIAGKAN----LDKADLEP 337
E DE++ ++T G+ SS+F + G A L + DL P
Sbjct: 317 REVDEDLDDFISKTLRETSLNSTGPTTSSEAQPGYISSLFSKLTGLAGSTRPLTQQDLGP 376
Query: 338 ALKALKDRLMTKNVA--------------------------------AMEEALVRILTPR 365
L +K+ LM KNVA A+E+A+ RILTP+
Sbjct: 377 VLAGMKEHLMKKNVARDIAERVCDGVGKSLEGKKVGGLRSIRGEVHAALEDAITRILTPK 436
Query: 366 RSIDILRDVHAAK------------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
S DIL + K + +PY + FVGVNGVGKSTNL+KVA+WLLQ+
Sbjct: 437 TSTDILHAIRQKKLTTMTTTRAGGESKMEPYSITFVGVNGVGKSTNLSKVAFWLLQNDFR 496
Query: 414 VMMAACDTFRSGAVEQLRTHARRL---------------QVPIFEKGYEKDPAIVAKEAI 458
V++AACDTFRSGAVEQLR H R L ++ ++EKGY KD A +AK+AI
Sbjct: 497 VLIAACDTFRSGAVEQLRVHVRNLGMLVNKETVEDDKGKKIDLYEKGYGKDAAGIAKDAI 556
Query: 459 QEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKF 518
A G DVVL+DTAGRMQDNEPLMRAL+KL+ LN PD ++FVGEALVGN+AVDQL+KF
Sbjct: 557 AYAKEEGFDVVLIDTAGRMQDNEPLMRALAKLVALNQPDKIVFVGEALVGNEAVDQLTKF 616
Query: 519 NQKLADLS--SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
++ L D S + + IDG+L+TK+DT+DDKVGAALSM +V+G P++FVGCGQ+YTDL+
Sbjct: 617 DRALKDFSKGEGKSGRGIDGMLVTKWDTVDDKVGAALSMTFVTGQPILFVGCGQTYTDLR 676
Query: 577 KLNVKSIVKTLL 588
+L V ++V+ LL
Sbjct: 677 QLRVSNVVQALL 688
>gi|336367716|gb|EGN96060.1| hypothetical protein SERLA73DRAFT_185575 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380430|gb|EGO21583.1| hypothetical protein SERLADRAFT_474122 [Serpula lacrymans var.
lacrymans S7.9]
Length = 669
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 249/686 (36%), Positives = 356/686 (51%), Gaps = 117/686 (17%)
Query: 1 MLEQLLIFTRGGLILWTCK-----ELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG++LW+ + SP+++LIR L+E R+ F D
Sbjct: 1 MLDLCSISHKGGIVLWSRSFTPDASQIASSSASPVNSLIREALIEGRTAEEKFEKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQ 115
Y +KWTF N+L L+FV YQRIL L YVDDLLA +K F ++++P F F
Sbjct: 57 GYAVKWTFVNDLELIFVVAYQRILQLTYVDDLLAALKTLFIKLFEP-------FLATF-- 107
Query: 116 LRKEAEARAEELKKSKQVTKPM-NNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
A + K VT P NN G+++ ++ G + R
Sbjct: 108 -----VASLHAMNSGKVVTAPAGNNTASWNFAKAFEGWDKVFDKLLKGLEDKAAQERKSR 162
Query: 175 GRK-----LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFD---------VSKLQKL 220
R L + ++ S + VA ++ + N+ A
Sbjct: 163 FRPTVHAPLADPSPPSDDLSTIPSESSVVAQDEQQIARNVQALKNRLRGRGGRRGGRGIA 222
Query: 221 RNKGGKKTDTVVSKGSNPDPKKKITKKNRVW-DDSPPES---KLDFTDPAGGNGSNIE-- 274
R G D++ S + +K TK R W ++P ES LDF+ G +G++
Sbjct: 223 RIDSGSGRDSMPSSDTESVKRKTNTKTQRKWGHEAPTESDMASLDFSFDKGDSGTDAPLS 282
Query: 275 ------VEAADHGESMMD-----KEEVFSSDSESEEDEEVGKHNKPD---AKKTGWFSSM 320
V+ A G D K+ F S + E ++ + + +P+ AK+
Sbjct: 283 QDALSLVDKASLGTRTRDGMYEVKDWEFGS-GDGETNDVISRALQPNGGVAKQASSSLGA 341
Query: 321 ----FQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
F + G L + DL+P L+ +K LM KNVA
Sbjct: 342 LSSLFARLTGSKVLTEQDLKPVLEGMKQHLMKKNVAMEIADKVCEGVGESLVGKKVGGFQ 401
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKS 397
A+ +L RILTP+ S D+L + + +QR PY + FVGVNGVGKS
Sbjct: 402 TTNAAVRLALSSSLTRILTPKTSTDLLLSIRTKLSSALTSSQQRVPYSITFVGVNGVGKS 461
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEK 444
TNL+KV +WL+Q+ + V++AACDTFRSGAVEQLR H R L +V ++E+
Sbjct: 462 TNLSKVCFWLMQNGLRVLIAACDTFRSGAVEQLRVHVRNLSKIAAESATDNGTRVELYER 521
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A +AK+AI A N DVVL+DTAGRMQDNEPLMRAL+KL+ +NNPD ++FVGE
Sbjct: 522 GYGKDAAGIAKQAISYAQENNFDVVLIDTAGRMQDNEPLMRALAKLVGVNNPDKIIFVGE 581
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSP--NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
ALVGN+AVDQL+KF++ L D SS+ + IDG+L+TK+DT+DDKVGAALSM YV+G P
Sbjct: 582 ALVGNEAVDQLTKFDRALRDFSSASAGKSRGIDGMLVTKWDTVDDKVGAALSMTYVTGQP 641
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
++FVGCG++YTDL++L V ++V+ +L
Sbjct: 642 IIFVGCGETYTDLRQLRVANVVRAIL 667
>gi|343427123|emb|CBQ70651.1| related to SRP101-signal recognition particle receptor, alpha chain
[Sporisorium reilianum SRZ2]
Length = 707
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 257/722 (35%), Positives = 363/722 (50%), Gaps = 149/722 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ IFT+ G +LW+ K AL + P+++LI+ LE+R+ F+ D
Sbjct: 1 MLDHFTIFTKNGFVLWS-KTFSPALNSADASANPVNSLIKQAFLEQRTADQKFDKD---- 55
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP------------KR 103
YTL+WTF NEL L FV VYQRIL L Y+D+LL ++ F++++ P
Sbjct: 56 GYTLRWTFANELDLTFVVVYQRILQLSYIDELLDTIRSLFTDLFAPFVQKLALASKSAVS 115
Query: 104 TDYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGF---ERGSNRSG 160
+ S + +R E A +E TK + NL+K Q ++ G ++G+
Sbjct: 116 SGTSKAATLSENVRLEFAAALKEW--DDIFTKTLRNLEKAAAQSKRKGVLGEKKGATNQA 173
Query: 161 ---GGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNI 209
GS D G + + +++ +VE +SR+ V GK++TS
Sbjct: 174 QIAAGSDKDSGHNTPSSTKDVKDSADIAKSVEALKSRLKLEASPGGRRVVRGKKSTS--- 230
Query: 210 GAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-----LDFT- 263
A S G + T G P K K+ R WD S S LDF+
Sbjct: 231 -AISASNGGSAPGTPGHASGTESPGGKKP----KAAKEMRKWDGSRSVSAQQVAALDFSG 285
Query: 264 ------DPAGGNGSNIEVEA--ADHGESMMDKEEVFSSDSESEEDEEVGKHNKPD----- 310
D G S I+ ++ + + + +V D + E+DE+ ++ D
Sbjct: 286 ATEKTDDDGAGLDSWIDEKSMGTKRSDGVYEIADVLEGDEDDEDDEDENENEDADGDAEA 345
Query: 311 ----AKKTGWFSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA--- 353
AK G+ S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 346 RGGIAKSAGFLSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADVA 405
Query: 354 -----------------------------MEEALVRILTPRRSIDILRDVHAAKEQRK-- 382
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 406 QRLCDSVERNLVGKNLGSFGSVKLEVKKALEEAITRILTPKSSTDILLEI-ATKRQRSAA 464
Query: 383 --------------------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTF 422
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDTF
Sbjct: 465 ASSLALATSAKDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDTF 524
Query: 423 RSGAVEQLRTHARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
R+GAVEQLR H R L + ++E+GY KD A +AK+A+ A G D
Sbjct: 525 RAGAVEQLRVHVRNLGQLRVDGIALDEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFD 584
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVL+DTAGRMQDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S
Sbjct: 585 VVLIDTAGRMQDNEPLMRALAKLVAVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSG 644
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
NP+ +DG LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V L
Sbjct: 645 VSNPRGLDGSLLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNAL 704
Query: 588 LK 589
LK
Sbjct: 705 LK 706
>gi|402895744|ref|XP_003910977.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Papio anubis]
gi|387542094|gb|AFJ71674.1| signal recognition particle receptor subunit alpha isoform 2
[Macaca mulatta]
Length = 610
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 248/664 (37%), Positives = 348/664 (52%), Gaps = 130/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 140 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 193
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NGS N+
Sbjct: 194 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGSPEAALSEDINL 252
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 253 -IRGTGPGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 305
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 306 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 365
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 366 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 425
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 426 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 485
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 486 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 545
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 546 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 605
Query: 586 TLLK 589
L+K
Sbjct: 606 ALMK 609
>gi|403262393|ref|XP_003923575.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Saimiri boliviensis boliviensis]
Length = 610
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 348/664 (52%), Gaps = 130/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFRN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P +KK + R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAP-TTMKKYEDSEKAKKPARSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 140 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 193
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWD--DSPPESKLDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ S + LD++ P NG+ N+
Sbjct: 194 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGSANKEVLDYSTPTT-NGTPEAALSEDINL 252
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 253 -IRGTGPGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 305
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 306 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 365
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 366 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 425
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 426 CDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 485
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 486 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 545
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 546 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 605
Query: 586 TLLK 589
L+K
Sbjct: 606 ALMK 609
>gi|296216605|ref|XP_002754617.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Callithrix jacchus]
Length = 609
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 249/667 (37%), Positives = 351/667 (52%), Gaps = 137/667 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFRN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKP-ARSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK-------- 223
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 140 KKKGAKKEGSDGPLATSKAVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 193
Query: 224 --GGKKTDTVVSKGSNPDPKKKITKKNRVWD--DSPPESKLDFTDPAGGNGS-------- 271
G +K++ K + PK+K K RVW+ S + LD++ P NG+
Sbjct: 194 GRGMEKSN----KSKSDAPKEKGKKAPRVWELGGSANKEVLDYSTPTT-NGTPEAALSED 248
Query: 272 -NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGK 327
N+ + G + D D S +DE +++ KP A K G M + + G
Sbjct: 249 INL-IRGTGPGGQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGS 301
Query: 328 ANLDKADLEPALKALKDRLMTKNVAA--------------------------------ME 355
+L + D+E L ++D L+ KNVAA ++
Sbjct: 302 KSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQ 361
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
E+LV+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV+
Sbjct: 362 ESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVL 421
Query: 416 MAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEAT 462
+AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 422 IAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIAFAR 481
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ L
Sbjct: 482 NQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRAL 541
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
AD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K+
Sbjct: 542 ADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKA 601
Query: 583 IVKTLLK 589
+V L+K
Sbjct: 602 VVAALMK 608
>gi|295424842|ref|NP_001171313.1| signal recognition particle receptor subunit alpha isoform 2 [Homo
sapiens]
gi|397498342|ref|XP_003819943.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Pan paniscus]
Length = 610
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 348/664 (52%), Gaps = 130/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 140 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 193
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 194 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 252
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 253 -IRGTGSGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 305
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 306 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 365
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 366 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 425
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 426 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 485
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 486 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 545
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 546 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 605
Query: 586 TLLK 589
L+K
Sbjct: 606 ALMK 609
>gi|426371005|ref|XP_004052446.1| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2 [Gorilla gorilla gorilla]
Length = 610
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 348/664 (52%), Gaps = 130/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 140 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 193
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 194 GRGMEKSNKSMKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 252
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 253 -IRGTGSGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 305
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 306 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 365
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 366 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 425
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 426 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 485
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 486 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 545
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V
Sbjct: 546 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVA 605
Query: 586 TLLK 589
L+K
Sbjct: 606 ALMK 609
>gi|194382530|dbj|BAG64435.1| unnamed protein product [Homo sapiens]
Length = 610
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 246/664 (37%), Positives = 348/664 (52%), Gaps = 130/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K R + G + +
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPV-RSMIETRGEKPKEKAKNS 139
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
+G K E + + + +G+ G EN ++SK + +R K
Sbjct: 140 KKKGAKKEGSDGPLATSKPVPAEKSGLPVGPEN------GVELSKEELIRRKREEFIQKH 193
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NI 273
G+ + + PK+K K RVW+ +K LD++ P NG+ N+
Sbjct: 194 GRGMEKSNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL 252
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANL 330
+ G + D D S +DE +++ KP A K G M + + G +L
Sbjct: 253 -IRGTGSGGQLQDL------DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSL 305
Query: 331 DKADLEPALKALKDRLMTKNVAA--------------------------------MEEAL 358
+ D+E L ++D L+ KNVAA ++E+L
Sbjct: 306 SREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESL 365
Query: 359 VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAA 418
V+IL P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AA
Sbjct: 366 VQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAA 425
Query: 419 CDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
CDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G
Sbjct: 426 CDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQG 485
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD
Sbjct: 486 FDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADH 545
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K+++
Sbjct: 546 SMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVLA 605
Query: 586 TLLK 589
L+K
Sbjct: 606 ALMK 609
>gi|118351025|ref|XP_001008791.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila]
gi|89290558|gb|EAR88546.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila SB210]
Length = 618
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 237/637 (37%), Positives = 342/637 (53%), Gaps = 69/637 (10%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IFT G+IL+ + + L+ +D LI+ L+ ER S+ D+ Y +
Sbjct: 1 MIELACIFTTSGVILFY--KAFSTLRYDLVDDLIKKNLINERFSEQSYLLDN----YRVM 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-------DPKRTDYSDFDEMF 113
WT E LVF+ Y +LHL D + ++K + E Y + + FD+ F
Sbjct: 55 WTRDQERNLVFMIAYSELLHLQSTDKFIKLLKAIYVEDYYNQIKIENHVIKEIPSFDKGF 114
Query: 114 RQ-LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDN 172
Q + K E E ++ K K KK G +L+KG G + G + D
Sbjct: 115 EQSVMKWQEYLKVERERQKSTMKSFEETKK-GQELKKGA--SGVQKKKPGKVGTEKDEYT 171
Query: 173 MRGRK-LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSK---LQKLRNKGGKKT 228
G L N +VG+ +S + K N+ + ++ K L K + + KK
Sbjct: 172 PSGNSALNNSVGSVGSYNSIDSADESKTDAKRNSIDSSEQSEIEKARLLLKQKFEKPKKE 231
Query: 229 DTVVSKGSNPDPKKKITKKNRVWDDSPPESKL--DFTDPAGGNGSNIEVEAADHGESMMD 286
T V K P ++K K V S+L + +I +E + +
Sbjct: 232 PTPVEK---PVVEQKKQKDKAVGTAGKYSSQLAKQLDQSSNKQEEDINLEKQKYLGGENE 288
Query: 287 KEEVFSSDSESEEDEEVGKHNKPDAKKTGWFS---SMFQSIAGKANLDKADLEPALKALK 343
K + F S E+++EV +K G+FS S F+ + G LD DL+P L K
Sbjct: 289 KIKGFDDISSDEDEQEV--------EKRGFFSKIVSNFKQLTGTKILDAQDLQPILDKFK 340
Query: 344 DRLMTKNVA--------------------------------AMEEALVRILTPRRSIDIL 371
++LM KNV ++++A+ +ILTP+R+IDI+
Sbjct: 341 EQLMNKNVGEQIAQQLCDSIKKNLINTQAKALTLLNKTVKESLQDAISKILTPKRNIDII 400
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
+ ++E+ KPY++ F+GVNGVGKSTNLAKVAY + SVM AACD FR+GAVEQ++
Sbjct: 401 AEAMRSREKGKPYIITFIGVNGVGKSTNLAKVAYLFKKEGFSVMFAACDNFRAGAVEQIK 460
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
TH R L++P+F++GY+ +PA +A +AI+EA DV+L+DTAGRMQDNEPLM+ LS L+
Sbjct: 461 THGRCLEIPVFDRGYKDEPADIAFQAIREAQAKKVDVLLIDTAGRMQDNEPLMKQLSTLV 520
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
NNPDL++F+GEALVGND DQL KFN+ L DLS + ID I+L+KFDT+DDKVGA
Sbjct: 521 VQNNPDLIVFIGEALVGNDGTDQLMKFNKALIDLSPKDRIREIDAIILSKFDTVDDKVGA 580
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ALSM Y +G P++F G GQ YT LKKLNV+++V LL
Sbjct: 581 ALSMTYNTGKPILFCGVGQKYTHLKKLNVRTVVHALL 617
>gi|344944602|gb|AEN25798.1| signal recognition particle receptor alpha chain [Ustilago maydis]
Length = 694
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 257/712 (36%), Positives = 368/712 (51%), Gaps = 153/712 (21%)
Query: 12 GLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNE 66
GL+LW+ K AL G+ P+++LI+ LE+R+ F D YTL+WTF NE
Sbjct: 1 GLVLWS-KTFSPALSGADASTNPVNSLIKQAFLEQRTADQKFEKD----GYTLRWTFANE 55
Query: 67 LGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--------KRTDYSDFDEMFRQLRK 118
L L FV VYQRIL L Y+D+LL ++ F++++ P ++ S L +
Sbjct: 56 LDLTFVVVYQRILQLSYIDELLDTIRTLFTDLFAPFVRKLTLSSKSAISSGASRVITLSE 115
Query: 119 EAEAR-AEELKKSKQV-TKPMNNLKKQGGQLQKGGF---ERGSNRSGGGSANDDGDS--D 171
A A LK+ + T+ + NL+K Q ++ G +G+ +A+ D +S +
Sbjct: 116 SARLEFASALKEWDNIFTRTLRNLEKAAAQSKRKGVLGERKGATNQAQTTASSDKESGQN 175
Query: 172 NMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNIGAFDVSKLQKLRNK 223
+++++ +VE +SR+ V GK+ ++S I A +
Sbjct: 176 TPISKEVKDSADISKSVEALKSRLKLEASPGGRRVVRGKK-SASGISA----------SN 224
Query: 224 GGKKTDTVVSKGSNPDP---KKKITKKNRVWDDSPPESK-----LDF---TDPAGGNGSN 272
GG T + P K K TK+ R WD S S LDF T+ +G NG++
Sbjct: 225 GGSAPGTPGNASGTESPSGKKAKATKEMRKWDGSRSVSAQQVAALDFSGATEKSGDNGAD 284
Query: 273 IE----------------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
++ E AD E D+E+ + + ++DE+ G + AK G+
Sbjct: 285 LDSWIDEKSMGKKRSDGVYEIADVLEEEEDEEDEDEDEEDEDKDEDAGFSST--AKSAGF 342
Query: 317 FSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA------------- 353
S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 343 LSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADVAQRLCDSVERN 402
Query: 354 -------------------MEEALVRILTPRRSIDILRDVHAAKEQR------------- 381
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 403 LVGKNLGSFGSVKVEVKKALEEAITRILTPKSSTDILLEI-ATKRQRITAASSLALATSA 461
Query: 382 ---------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDTFR+GAVEQLR
Sbjct: 462 KDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDTFRAGAVEQLRV 521
Query: 433 HARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
H R L + ++E+GY KD A +AK+A+ A G DVVL+DTAGRM
Sbjct: 522 HVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFDVVLIDTAGRM 581
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
QDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S NP+ +DG
Sbjct: 582 QDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLDGS 641
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V LLK
Sbjct: 642 LLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNALLK 693
>gi|344944613|gb|AEN25808.1| signal recognition particle receptor alpha chain [Ustilago maydis]
Length = 695
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 257/712 (36%), Positives = 368/712 (51%), Gaps = 153/712 (21%)
Query: 12 GLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNE 66
GL+LW+ K AL G+ P+++LI+ LE+R+ F D YTL+WTF NE
Sbjct: 2 GLVLWS-KTFSPALSGADASTNPVNSLIKQAFLEQRTADQKFEKD----GYTLRWTFANE 56
Query: 67 LGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--------KRTDYSDFDEMFRQLRK 118
L L FV VYQRIL L Y+D+LL ++ F++++ P ++ S L +
Sbjct: 57 LDLTFVVVYQRILQLSYIDELLDTIRTLFTDLFAPFVRKLTLSSKSAISSGASRVITLSE 116
Query: 119 EAEAR-AEELKKSKQV-TKPMNNLKKQGGQLQKGGF---ERGSNRSGGGSANDDGDS--D 171
A A LK+ + T+ + NL+K Q ++ G +G+ +A+ D +S +
Sbjct: 117 SARLEFASALKEWDNIFTRTLRNLEKAAAQSKRKGVLGERKGATNQAQTTASSDKESGQN 176
Query: 172 NMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNIGAFDVSKLQKLRNK 223
+++++ +VE +SR+ V GK+ ++S I A +
Sbjct: 177 TPISKEVKDSADISKSVEALKSRLKLEASPGGRRVVRGKK-SASGISA----------SN 225
Query: 224 GGKKTDTVVSKGSNPDP---KKKITKKNRVWDDSPPESK-----LDF---TDPAGGNGSN 272
GG T + P K K TK+ R WD S S LDF T+ +G NG++
Sbjct: 226 GGSAPGTPGNASGTESPSGKKAKATKEMRKWDGSRSVSAQQVAALDFSGATEKSGDNGAD 285
Query: 273 IE----------------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
++ E AD E D+E+ + + ++DE+ G + AK G+
Sbjct: 286 LDSWIDEKSMGKKRSDGVYEIADVLEEEEDEEDEDEDEEDEDKDEDAGFSST--AKSAGF 343
Query: 317 FSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA------------- 353
S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 344 LSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADVAQRLCDSVERN 403
Query: 354 -------------------MEEALVRILTPRRSIDILRDVHAAKEQR------------- 381
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 404 LVGKNLGSFGSVKVEVKKALEEAITRILTPKSSTDILLEI-ATKRQRITAASSLALATSA 462
Query: 382 ---------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDTFR+GAVEQLR
Sbjct: 463 KDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDTFRAGAVEQLRV 522
Query: 433 HARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
H R L + ++E+GY KD A +AK+A+ A G DVVL+DTAGRM
Sbjct: 523 HVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFDVVLIDTAGRM 582
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
QDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S NP+ +DG
Sbjct: 583 QDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLDGS 642
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V LLK
Sbjct: 643 LLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNALLK 694
>gi|344944514|gb|AEN25718.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944525|gb|AEN25728.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944591|gb|AEN25788.1| signal recognition particle receptor alpha chain [Ustilago maydis]
Length = 694
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 257/712 (36%), Positives = 368/712 (51%), Gaps = 153/712 (21%)
Query: 12 GLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNE 66
GL+LW+ K AL G+ P+++LI+ LE+R+ F D YTL+WTF NE
Sbjct: 1 GLVLWS-KTFSPALSGADASTNPVNSLIKQAFLEQRTADQKFEKD----GYTLRWTFANE 55
Query: 67 LGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--KRTDYSDFDEMF----RQLRKEA 120
L L FV VYQRIL L Y+D+LL ++ F++++ P ++ S + R +
Sbjct: 56 LDLTFVVVYQRILQLSYIDELLDTIRTLFTDLFAPFVRKLTLSSKSAISSGASRVITLSE 115
Query: 121 EARAEELKKSKQ----VTKPMNNLKKQGGQLQKGGF---ERGSNRSGGGSANDDGDS--D 171
AR E K+ T+ + NL+K Q ++ G +G+ +A+ D +S +
Sbjct: 116 SARLEFAAALKEWDNIFTRTLRNLEKAAAQSKRKGVLGERKGATNQAQTTASSDKESGQN 175
Query: 172 NMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNIGAFDVSKLQKLRNK 223
+++++ +VE +SR+ V GK+ ++S I A +
Sbjct: 176 TPISKEVKDSADISKSVEALKSRLKLEASPGGRRVVRGKK-SASGISA----------SN 224
Query: 224 GGKKTDTVVSKGSNPDP---KKKITKKNRVWDDSPPESK-----LDF---TDPAGGNGSN 272
GG T + P K K TK+ R WD S S LDF T+ +G NG++
Sbjct: 225 GGSAPGTPGNASGTESPSGKKAKATKEMRKWDGSRSVSAQQVAALDFSGATEKSGDNGAD 284
Query: 273 IE----------------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
++ E AD E D+E+ + + ++DE+ G + AK G+
Sbjct: 285 LDSWIDEKSMGKKRSDGVYEIADVLEEEEDEEDEDEDEEDEDKDEDAGFSST--AKSAGF 342
Query: 317 FSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA------------- 353
S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 343 LSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADVAQRLCDSVERN 402
Query: 354 -------------------MEEALVRILTPRRSIDILRDVHAAKEQR------------- 381
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 403 LVGKNLGSFGSVKVEVKKALEEAITRILTPKSSTDILLEI-ATKRQRITAASSLALATSA 461
Query: 382 ---------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDTFR+GAVEQLR
Sbjct: 462 KDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDTFRAGAVEQLRV 521
Query: 433 HARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
H R L + ++E+GY KD A +AK+A+ A G DVVL+DTAGRM
Sbjct: 522 HVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFDVVLIDTAGRM 581
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
QDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S NP+ +DG
Sbjct: 582 QDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLDGS 641
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V LLK
Sbjct: 642 LLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNALLK 693
>gi|344944569|gb|AEN25768.1| signal recognition particle receptor alpha chain [Ustilago maydis]
Length = 695
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 257/712 (36%), Positives = 368/712 (51%), Gaps = 153/712 (21%)
Query: 12 GLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNE 66
GL+LW+ K AL G+ P+++LI+ LE+R+ F D YTL+WTF NE
Sbjct: 2 GLVLWS-KTFSPALSGADASTNPVNSLIKQAFLEQRTADQKFEKD----GYTLRWTFANE 56
Query: 67 LGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--KRTDYSDFDEMF----RQLRKEA 120
L L FV VYQRIL L Y+D+LL ++ F++++ P ++ S + R +
Sbjct: 57 LDLTFVVVYQRILQLSYIDELLDTIRTLFTDLFAPFVRKLTLSSKSAISSGASRVITLSE 116
Query: 121 EARAEELKKSKQ----VTKPMNNLKKQGGQLQKGGF---ERGSNRSGGGSANDDGDS--D 171
AR E K+ T+ + NL+K Q ++ G +G+ +A+ D +S +
Sbjct: 117 SARLEFAAALKEWDDIFTRTLRNLEKAAAQSKRKGVLGERKGATNQAQTTASSDKESGQN 176
Query: 172 NMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNIGAFDVSKLQKLRNK 223
+++++ +VE +SR+ V GK+ ++S I A +
Sbjct: 177 TPISKEVKDSADISKSVEALKSRLKLEASPGGRRVVRGKK-SASGISA----------SN 225
Query: 224 GGKKTDTVVSKGSNPDP---KKKITKKNRVWDDSPPESK-----LDF---TDPAGGNGSN 272
GG T + P K K TK+ R WD S S LDF T+ +G NG++
Sbjct: 226 GGSAPGTPGNASGTESPSGKKAKATKEMRKWDGSRSVSAQQVAALDFSGATEKSGDNGAD 285
Query: 273 IE----------------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
++ E AD E D+E+ + + ++DE+ G + AK G+
Sbjct: 286 LDSWIDEKSMGKKRSDGVYEIADVLEEEEDEEDEDEDEEDEDKDEDAGFSST--AKSAGF 343
Query: 317 FSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA------------- 353
S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 344 LSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADVAQRLCDSVERN 403
Query: 354 -------------------MEEALVRILTPRRSIDILRDVHAAKEQR------------- 381
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 404 LVGKNLGSFGSVKVEVKKALEEAITRILTPKSSTDILLEI-ATKRQRITAASSLALATSA 462
Query: 382 ---------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDTFR+GAVEQLR
Sbjct: 463 KDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDTFRAGAVEQLRV 522
Query: 433 HARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
H R L + ++E+GY KD A +AK+A+ A G DVVL+DTAGRM
Sbjct: 523 HVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFDVVLIDTAGRM 582
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
QDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S NP+ +DG
Sbjct: 583 QDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLDGS 642
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V LLK
Sbjct: 643 LLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNALLK 694
>gi|392576933|gb|EIW70063.1| hypothetical protein TREMEDRAFT_43682 [Tremella mesenterica DSM
1558]
Length = 652
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 256/680 (37%), Positives = 352/680 (51%), Gaps = 122/680 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALK------GSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ + I + GL+LW+ K A SPI+ L+R +E R Y+ G
Sbjct: 1 MLDHISISHQSGLVLWS-KSFTPAFSTLVTSTASPINALVREGFIENRL-TEETGYEKDG 58
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFR 114
Y+++WT N LGLVFV V+ +L L Y+ LLA KQ F ++ + +
Sbjct: 59 --YSVRWTMENGLGLVFVVVFPALLPLAYIPQLLARTKQLFLSLFQ------TYLQGLIG 110
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
L A E + +S L+ QL+ + R +R D +S +
Sbjct: 111 SL-NSGSAIVEHISQSA--------LRLLQTQLEIQQWGRIFDR-----CLKDCESQDTV 156
Query: 175 G---RKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTV 231
G L + HS+ + + E+ A E S N+ A SKL+ + +GG+++ V
Sbjct: 157 GFSYHTLRSTHSSCLSDSVVETSTPVTA---EEISKNVQAIK-SKLKARKPRGGRES-AV 211
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESK----LDFTDPA-GGNGS---------NIEVEA 277
S S P K R W DS ++ D++ PA NG ++ A
Sbjct: 212 SSSPSRKTPSSAGAKLMRKWGDSVVSAEDMASFDYSAPAPTTNGHSDAPAVKTDDLISTA 271
Query: 278 ADHGESMMDKEEVFSSD---SESEEDEEV-----GKHNKPDA--KKTGWFSSMFQSIAGK 327
A + EV D SE +EE+ G+ D KK GW M + GK
Sbjct: 272 AMGTRNKQGTYEVADWDLGRSELPTEEEILARVTGELKITDKVEKKVGW-GDMLNRLTGK 330
Query: 328 ANLDKADLEPALKALKDRLMTKNVA--------------------------------AME 355
L + DL P L+ ++ LM KNVA ++
Sbjct: 331 KILTEEDLRPVLREMEKHLMGKNVAKDIAEKMCEGVGAALVGKRLAGLTSIKSQVQSSLS 390
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRK-------PYVVVFVGVNGVGKSTNLAKVAYWLL 408
++L R+LTPR S DIL ++ + PY + FVGVNGVGKSTNL+KV +WLL
Sbjct: 391 DSLTRVLTPRTSTDILLEIQRKRSALTSLSTSPGPYTLTFVGVNGVGKSTNLSKVCFWLL 450
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRL---------------QVPIFEKGYEKDPAIV 453
Q+ + V++AACDTFRSGAVEQLR H R L +V +FE+GY KD A +
Sbjct: 451 QNGLRVLIAACDTFRSGAVEQLRVHVRNLGALGDEMGLAGEGGKKVELFERGYGKDAAGI 510
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVD 513
AK+AI A G DVVL+DTAGRMQDNEPLMRAL+KL+ +N+PD ++FVGEALVGN+AVD
Sbjct: 511 AKDAISYAKEQGFDVVLIDTAGRMQDNEPLMRALAKLVSVNDPDKIIFVGEALVGNEAVD 570
Query: 514 QLSKFNQKLADLSS-----SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
QL+KF++ L D S+ + + IDGI+LTKFDTIDDKVGAALSM YV+G P++FVGC
Sbjct: 571 QLTKFDRALKDFSAAGIGGTQRKRGIDGIILTKFDTIDDKVGAALSMTYVTGQPILFVGC 630
Query: 569 GQSYTDLKKLNVKSIVKTLL 588
GQ+YTDL++L V IV+ LL
Sbjct: 631 GQTYTDLRQLRVNHIVQALL 650
>gi|344944504|gb|AEN25709.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944536|gb|AEN25738.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944547|gb|AEN25748.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944558|gb|AEN25758.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944580|gb|AEN25778.1| signal recognition particle receptor alpha chain [Ustilago maydis]
gi|344944624|gb|AEN25818.1| signal recognition particle receptor alpha chain [Ustilago maydis]
Length = 695
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 257/712 (36%), Positives = 368/712 (51%), Gaps = 153/712 (21%)
Query: 12 GLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNE 66
GL+LW+ K AL G+ P+++LI+ LE+R+ F D YTL+WTF NE
Sbjct: 2 GLVLWS-KTFSPALSGADASTNPVNSLIKQAFLEQRTADQKFEKD----GYTLRWTFANE 56
Query: 67 LGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--KRTDYSDFDEMF----RQLRKEA 120
L L FV VYQRIL L Y+D+LL ++ F++++ P ++ S + R +
Sbjct: 57 LDLTFVVVYQRILQLSYIDELLDTIRTLFTDLFAPFVRKLTLSSKSAISSGASRVITLSE 116
Query: 121 EARAEELKKSKQ----VTKPMNNLKKQGGQLQKGGF---ERGSNRSGGGSANDDGDS--D 171
AR E K+ T+ + NL+K Q ++ G +G+ +A+ D +S +
Sbjct: 117 SARLEFAAALKEWDNIFTRTLRNLEKAAAQSKRKGVLGERKGATNQAQTTASSDKESGQN 176
Query: 172 NMRGRKLENGHSNVGNVEIEESRVT--------GVANGKENTSSNIGAFDVSKLQKLRNK 223
+++++ +VE +SR+ V GK+ ++S I A +
Sbjct: 177 TPISKEVKDSADISKSVEALKSRLKLEASPGGRRVVRGKK-SASGISA----------SN 225
Query: 224 GGKKTDTVVSKGSNPDP---KKKITKKNRVWDDSPPESK-----LDF---TDPAGGNGSN 272
GG T + P K K TK+ R WD S S LDF T+ +G NG++
Sbjct: 226 GGSAPGTPGNASGTESPSGKKAKATKEMRKWDGSRSVSAQQVAALDFSGATEKSGDNGAD 285
Query: 273 IE----------------VEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
++ E AD E D+E+ + + ++DE+ G + AK G+
Sbjct: 286 LDSWIDEKSMGKKRSDGVYEIADVLEEEEDEEDEDEDEEDEDKDEDAGFSST--AKSAGF 343
Query: 317 FSSMFQS----------IAGKANLDKADLEPALKALKDRLMTKNVAA------------- 353
S + + + G L K DL PAL A+ L +KNVAA
Sbjct: 344 LSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHLQSKNVAADVAQRLCDSVERN 403
Query: 354 -------------------MEEALVRILTPRRSIDILRDVHAAKEQR------------- 381
+EEA+ RILTP+ S DIL ++ A K QR
Sbjct: 404 LVGKNLGSFGSVKVEVKKALEEAITRILTPKSSTDILLEI-ATKRQRITAASSLALATSA 462
Query: 382 ---------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
PY + FVGVNGVGKSTNLAKV +WLLQ+++ V++AACDTFR+GAVEQLR
Sbjct: 463 KDKELASKPDPYSICFVGVNGVGKSTNLAKVCFWLLQNRLRVLIAACDTFRAGAVEQLRV 522
Query: 433 HARRL---------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
H R L + ++E+GY KD A +AK+A+ A G DVVL+DTAGRM
Sbjct: 523 HVRNLGQLRVDGVALEEQKGHIELYERGYGKDAAGIAKDALSYAKAEGFDVVLIDTAGRM 582
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
QDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++KF+ + D S NP+ +DG
Sbjct: 583 QDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLDGS 642
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++L V +V LLK
Sbjct: 643 LLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQLRVHHVVNALLK 694
>gi|307172333|gb|EFN63821.1| Signal recognition particle receptor subunit alpha-like protein
[Camponotus floridanus]
Length = 611
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/343 (54%), Positives = 234/343 (68%), Gaps = 46/343 (13%)
Query: 293 SDSESEEDEEVGKHNKPDA-KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV 351
S+SE D+E +H+K KK SMF+S+ G +L + D+ P L+ LKD L+TKNV
Sbjct: 269 SESEDNSDQEEIEHSKLQMQKKNKSMFSMFKSLVGSKSLKQEDMLPVLEKLKDHLITKNV 328
Query: 352 AA--------------------------------MEEALVRILTPRRSIDILRDVHAAKE 379
AA + +ALV+IL+P+R IDILRD AK+
Sbjct: 329 AADIAQKLCDSVGMKLEGKVLGTFDSVANTIKATLTDALVQILSPKRRIDILRDALEAKK 388
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-- 437
+PYV+ F GVNGVGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTH R L
Sbjct: 389 SNRPYVMTFCGVNGVGKSTNLAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHTRHLNA 448
Query: 438 -----------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
V ++EKGY KD A +A EAI+ A + D+VLVDTAGRMQDNEPLMRA
Sbjct: 449 LHPPEKHRNQSMVQLYEKGYGKDAAGIAMEAIRFAKDSRIDIVLVDTAGRMQDNEPLMRA 508
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S S NP +IDGI+LTKFDTID
Sbjct: 509 LTKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADYSQSANPHIIDGIVLTKFDTID 568
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DKVGAA++M Y++G P++FVG GQ+YTDLK LN K++V L+K
Sbjct: 569 DKVGAAITMTYITGQPIVFVGTGQTYTDLKSLNAKAVVHALMK 611
>gi|427794263|gb|JAA62583.1| Putative signal recognition particle receptor alpha subunit,
partial [Rhipicephalus pulchellus]
Length = 669
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 248/681 (36%), Positives = 337/681 (49%), Gaps = 139/681 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++ G++LW C + ++ LIR+ +L+ER G SF +++ Y L
Sbjct: 36 MLDLFTIFSKSGIVLW-CFQGTTQFFTPSVNALIRTVILQERGGDNSFTHENLVLKYKLD 94
Query: 61 WTF--------HNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD---- 108
F L L +V + +HL + D A ++ +++ +
Sbjct: 95 NEFELVFVVAYQKVLQLSYVDKFLDDVHLEFRDKYKACLESGNFFSNFSFSSEFQEVLRG 154
Query: 109 ---FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGS--------- 156
+ M +K+ E LK K V + N K KG
Sbjct: 155 AEEYGRMLATQQKKMRTFEESLKSKKTVASMIENKKDAKPAATKGKEAAKKKPEAPKKEA 214
Query: 157 -------NRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNI 209
N GG NDD + N R + E
Sbjct: 215 APKEAVVNGDAGGDPNDDDIAKN-RQKLFE------------------------------ 243
Query: 210 GAFDVSKLQKLRNKGGKKTDTVVSKGS-NPDPKKKITKKNRVWDDSPPESKLDFTDPAGG 268
KLQ G KK+D KG+ +P K +KK R+WD S L D + G
Sbjct: 244 ------KLQ-----GKKKSD----KGAKSPAAAKDKSKKPRIWDHGGKSSDLKTLDYSEG 288
Query: 269 -------NGSNIEVEAADH-------GESMMDKEEVFSSDSESEEDEEVG-KHNKPDAKK 313
NG + ++ A+ G + D E S + EED V K K
Sbjct: 289 APPEGEENGRSEDILTAESRSWVGKGGGEIKDMEYSESEEEMEEEDAHVSSKQKSTKGGK 348
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------------- 353
+G MF+ + G ++ D+ P L L+D L+ KNVAA
Sbjct: 349 SGGMFGMFRGLVGSKSITAEDMAPVLDKLRDHLIAKNVAADVSQKLCDSVGARLEGRVLG 408
Query: 354 ------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
+ +ALV++L+P+R +++LRDV A+ +P+V+ F GVNGVGKSTNLA
Sbjct: 409 SFTGVASTVRATLVDALVQLLSPKRRVNLLRDVLEAQRASRPFVITFCGVNGVGKSTNLA 468
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEK 448
K+ +WL+++ V++AACDTFR+GAVEQLRTH R L V ++EKGY K
Sbjct: 469 KICFWLIENNCRVLIAACDTFRAGAVEQLRTHMRHLNALHPPEKHGGKQMVQLYEKGYGK 528
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A +A EAI A DVVL+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVG
Sbjct: 529 DAAGIAMEAINYARETKIDVVLIDTAGRMQDNEPLMRALAKLITVNKPDLVLFVGEALVG 588
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
N+AVDQL KFNQ LAD SS NP LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG
Sbjct: 589 NEAVDQLVKFNQALADHSSEENPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGT 648
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
GQ+Y DLK +N K++V L+K
Sbjct: 649 GQTYIDLKTINAKAVVHALMK 669
>gi|427788983|gb|JAA59943.1| Putative signal recognition particle receptor alpha subunit
[Rhipicephalus pulchellus]
Length = 671
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 248/681 (36%), Positives = 337/681 (49%), Gaps = 139/681 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++ G++LW C + ++ LIR+ +L+ER G SF +++ Y L
Sbjct: 38 MLDLFTIFSKSGIVLW-CFQGTTQFFTPSVNALIRTVILQERGGDNSFTHENLVLKYKLD 96
Query: 61 WTF--------HNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD---- 108
F L L +V + +HL + D A ++ +++ +
Sbjct: 97 NEFELVFVVAYQKVLQLSYVDKFLDDVHLEFRDKYKACLESGNFFSNFSFSSEFQEVLRG 156
Query: 109 ---FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGS--------- 156
+ M +K+ E LK K V + N K KG
Sbjct: 157 AEEYGRMLATQQKKMRTFEESLKSKKTVASMIENKKDAKPAATKGKEAAKKKPEAPKKEA 216
Query: 157 -------NRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNI 209
N GG NDD + N R + E
Sbjct: 217 APKEAVVNGDAGGDPNDDDIAKN-RQKLFE------------------------------ 245
Query: 210 GAFDVSKLQKLRNKGGKKTDTVVSKGS-NPDPKKKITKKNRVWDDSPPESKLDFTDPAGG 268
KLQ G KK+D KG+ +P K +KK R+WD S L D + G
Sbjct: 246 ------KLQ-----GKKKSD----KGAKSPAAAKDKSKKPRIWDHGGKSSDLKTLDYSEG 290
Query: 269 -------NGSNIEVEAADH-------GESMMDKEEVFSSDSESEEDEEVG-KHNKPDAKK 313
NG + ++ A+ G + D E S + EED V K K
Sbjct: 291 APPEGEENGRSEDILTAESRSWVGKGGGEIKDMEYSESEEEMEEEDAHVSSKQKSTKGGK 350
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------------- 353
+G MF+ + G ++ D+ P L L+D L+ KNVAA
Sbjct: 351 SGGMFGMFRGLVGSKSITAEDMAPVLDKLRDHLIAKNVAADVSQKLCDSVGARLEGRVLG 410
Query: 354 ------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
+ +ALV++L+P+R +++LRDV A+ +P+V+ F GVNGVGKSTNLA
Sbjct: 411 SFTGVASTVRATLVDALVQLLSPKRRVNLLRDVLEAQRASRPFVITFCGVNGVGKSTNLA 470
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEK 448
K+ +WL+++ V++AACDTFR+GAVEQLRTH R L V ++EKGY K
Sbjct: 471 KICFWLIENNCRVLIAACDTFRAGAVEQLRTHMRHLNALHPPEKHGGKQMVQLYEKGYGK 530
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A +A EAI A DVVL+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVG
Sbjct: 531 DAAGIAMEAINYARETKIDVVLIDTAGRMQDNEPLMRALAKLITVNKPDLVLFVGEALVG 590
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
N+AVDQL KFNQ LAD SS NP LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG
Sbjct: 591 NEAVDQLVKFNQALADHSSEENPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGT 650
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
GQ+Y DLK +N K++V L+K
Sbjct: 651 GQTYIDLKTINAKAVVHALMK 671
>gi|189236353|ref|XP_001807129.1| PREDICTED: similar to signal recognition particle receptor alpha
subunit (sr-alpha) [Tribolium castaneum]
gi|270005877|gb|EFA02325.1| hypothetical protein TcasGA2_TC007993 [Tribolium castaneum]
Length = 614
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 230/330 (69%), Gaps = 47/330 (14%)
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA----------- 353
+ KP A + G FS +F+ + G NL AD++PAL +KD L+ KNVAA
Sbjct: 287 QQTKP-ASRGGMFS-IFKGLVGSKNLTAADMQPALDKMKDHLIAKNVAADIAIKLCESVA 344
Query: 354 ---------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVN 392
+ E+LV+IL+P+R +DILRD A+ +PYV+ F GVN
Sbjct: 345 LKLEGKVLGTFESVASTVKSTLTESLVQILSPKRRVDILRDCMEAQRSGRPYVMTFCGVN 404
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------V 439
GVGKSTNLAK+ +WL+++ + V++AACDTFR+GAVEQLRTH R L V
Sbjct: 405 GVGKSTNLAKICFWLIENNMRVLIAACDTFRAGAVEQLRTHMRHLNALHPPERHGGRQMV 464
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
++EKGY KD A +A EAI+ AT + DVVL+DTAGRMQDNEPLMRAL+KLI +N PDLV
Sbjct: 465 QLYEKGYGKDAAGIAMEAIKYATDSRFDVVLIDTAGRMQDNEPLMRALTKLIKVNEPDLV 524
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFVGEALVGN+AVDQL KFNQ LAD SSS NP +IDGI+LTKFDTIDDKVGAA+SM Y++
Sbjct: 525 LFVGEALVGNEAVDQLVKFNQALADYSSSSNPHIIDGIVLTKFDTIDDKVGAAISMTYIT 584
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++FVG GQ+YTDLK LN K++V +L+K
Sbjct: 585 GQPIVFVGTGQTYTDLKALNAKAVVHSLMK 614
>gi|260831512|ref|XP_002610703.1| hypothetical protein BRAFLDRAFT_202369 [Branchiostoma floridae]
gi|229296070|gb|EEN66713.1| hypothetical protein BRAFLDRAFT_202369 [Branchiostoma floridae]
Length = 629
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 183/329 (55%), Positives = 225/329 (68%), Gaps = 47/329 (14%)
Query: 308 KPDAKKTGWFS--SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------ 353
+ D+KK+ F +MF+ + G+ + + P L +KD L+ KNVAA
Sbjct: 301 QKDSKKSSGFGVFNMFKGLVGQKTVTAEAMAPVLDKMKDHLIGKNVAADIADQLCTSVAT 360
Query: 354 --------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNG 393
+ ++LV+ILTP+R IDILRDV AK Q +PY + F GVNG
Sbjct: 361 KLEGRVLGTFSGVTSTIRQAIRDSLVQILTPKRRIDILRDVMEAKSQNRPYTITFCGVNG 420
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVP 440
VGKSTNLAK+ +WL+++ V++AACDTFR+GAVEQLRTHARR+ V
Sbjct: 421 VGKSTNLAKICFWLVENGFRVLIAACDTFRAGAVEQLRTHARRMAALHPPEHHSGVKMVQ 480
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++EKGY KD A +A EAI A DVVLVDTAGRMQDNEPLMRALSKLI +N P+LVL
Sbjct: 481 LYEKGYGKDAAGIAMEAINFAREQRIDVVLVDTAGRMQDNEPLMRALSKLIKVNQPELVL 540
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FVGEALVGND+VDQL+KFNQ LAD SS NP+LIDGILLTKFDTIDDKVGAA+SM Y +G
Sbjct: 541 FVGEALVGNDSVDQLTKFNQALADFSSMENPRLIDGILLTKFDTIDDKVGAAISMTYTTG 600
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
PV+FVG GQ+YTDLK LNV+++V LLK
Sbjct: 601 QPVVFVGTGQTYTDLKALNVQAVVNALLK 629
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW + + L P++ LI++ +L+ER ++SF + S TL+
Sbjct: 1 MLDLFTIFSKGGIVLWYFQGVNQVLT-EPVNALIKTVILQERGSVSSFQHGS----LTLE 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS-----DFDEMFRQ 115
+ NE L+FV YQ+IL L Y+D + +++ F + Y D + DF E F++
Sbjct: 56 YKLDNEFELIFVVAYQKILQLSYIDKFIDDVRREFRDKYAQDLRDGNVMRDFDFTEEFQR 115
Query: 116 LRKEAEARAE-ELKKSKQV 133
L K+AEA A+ + K+ +Q+
Sbjct: 116 LLKKAEASAKNQAKQPRQM 134
>gi|388851837|emb|CCF54431.1| related to SRP101-signal recognition particle receptor, alpha chain
[Ustilago hordei]
Length = 706
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 254/732 (34%), Positives = 355/732 (48%), Gaps = 170/732 (23%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGS-----PIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ IFT+ G +LW+ K AL + P+++LI+ LE+R+ F+ D
Sbjct: 1 MLDHFTIFTKNGFVLWS-KTFSPALNSADAATNPVNSLIKQAFLEQRTADQKFDKD---- 55
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQ 115
YTL+WTF NEL L FV VYQRIL L Y+ +LL ++ F+++ ++ F
Sbjct: 56 GYTLRWTFANELDLTFVVVYQRILQLSYIYELLDTVRSLFTDL-------FAPFVRTLAL 108
Query: 116 LRKEAEA----RAEELKKSKQV-------------TKPMNNLKKQGGQLQKGGFERGSNR 158
K A A +A L +S ++ TK + NL+K Q ++ G G +
Sbjct: 109 SSKSALASGTSKAATLSESARLEFSAALKEWGDIFTKTLRNLEKAAAQSKRKGL-LGEKK 167
Query: 159 SGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
A SD G+ N +V +ES +AN E S + + S
Sbjct: 168 GVTNQAQAAAGSDKESGQNTPNSIKDV-----KES--ADIANSVEALKSRL-KLEASPAG 219
Query: 219 KLRNKGGKKTDTVVSKGSNPDP---------------KKKITKKNRVWDDSPPESK---- 259
+ G K T + + P K K TK+ R WD S S
Sbjct: 220 RRAVHGKKSTPGLSASNGGSVPGTPGHASGTESPGGKKGKATKEMRKWDGSRSVSTQQVA 279
Query: 260 -LDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSES-EEDEEV-------------- 303
LDF+ + + EA +S +D++ + S+ E +V
Sbjct: 280 ALDFS-----GATEKDAEAGADLDSWIDEKSMGKKRSDGVYEIADVLEEDEDDDEEEEDD 334
Query: 304 -------GKHNKPDAKKTGWFSSMFQS----------IAGKANLDKADLEPALKALKDRL 346
K G+ S + + + G L K DL PAL A+ L
Sbjct: 335 EEEDDTKDGDTAASGKSAGFLSRIGSASSSGASFFSRLTGAKTLTKEDLAPALSAMASHL 394
Query: 347 MTKNVA--------------------------------AMEEALVRILTPRRSIDILRDV 374
+KNVA A+EEA+ RILTP+ S DIL ++
Sbjct: 395 QSKNVAVDVAQRLCDSVERNLVGKNLGSFGSVKAEVKKALEEAITRILTPKSSTDILLEI 454
Query: 375 HAAKEQRK----------------------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A K QR PY + FVGVNGVGKSTNLAKV +WLLQ+++
Sbjct: 455 -ATKRQRSAAASSLALATNAKDKELASKPDPYSISFVGVNGVGKSTNLAKVCFWLLQNRL 513
Query: 413 SVMMAACDTFRSGAVEQLRTHARRL---------------QVPIFEKGYEKDPAIVAKEA 457
V++AACDTFR+GAVEQLR H R L +V ++E+GY KD A +AK+A
Sbjct: 514 RVLIAACDTFRAGAVEQLRVHVRNLGQLRVDGVALDEQKGRVELYERGYGKDAAGIAKDA 573
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
+ A G DVVL+DTAGRMQDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQ++K
Sbjct: 574 LTYAKAEGYDVVLIDTAGRMQDNEPLMRALAKLVSVNRPDKIIFVGEALVGNEAVDQITK 633
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
F++ + D S NP+ +DG LLTK+DT+DDKVG AL+ +G P+ F+G GQ+YTDL++
Sbjct: 634 FDRAMKDFSGVSNPRGLDGSLLTKWDTVDDKVGTALTTTSATGLPIYFLGTGQTYTDLRQ 693
Query: 578 LNVKSIVKTLLK 589
L V +V LLK
Sbjct: 694 LRVHHVVNALLK 705
>gi|432893936|ref|XP_004075926.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 2 [Oryzias latipes]
Length = 615
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 246/672 (36%), Positives = 351/672 (52%), Gaps = 141/672 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGS---PIDTLIRSCLLEERSGLASFNYDSAGAAY 57
ML+ IF++GG++LW + G +K S P++ LIRS +L+
Sbjct: 1 MLDFFTIFSKGGIVLWCFQ--GAGVKESFTGPVNALIRSVILQ----------------- 41
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT---------DYSD 108
+Q IL L YVD + ++ F + Y + + +
Sbjct: 42 ---------------VGFQNILTLTYVDKFIDDVQLRFRDRYKNELVQKGALMLLNNSFE 86
Query: 109 FDEMFRQLRKEAEARA-----------EELKKSKQVTKPMNNLKKQGGQLQKGGFERGSN 157
F++ F+++ +EAE + +E +KSK+ K M ++ G ++G
Sbjct: 87 FEDDFQRILREAEETSRTRSTTYMRAFQESEKSKKTVKSM---------IETKGGDKGKE 137
Query: 158 RSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL 217
+ G S + + K+E V NG N G +
Sbjct: 138 QGGKKSKSSKKEPPAPEPAKVEKPSPPAQK---------AVQNG------NQGLTPEEII 182
Query: 218 QKLRNKGGKK-TDTVVSKGS-NPDPKKKITKKNRVWDDSPPESK-LDFT----DPAGGNG 270
QK R + +K T K S +P P+K K RVWD+ +K LD++ D G N
Sbjct: 183 QKKREEFIRKHTAGPTEKPSKSPKPQKPRGKTKRVWDNGGTNTKELDYSAKNGDSPGVND 242
Query: 271 SNIEV-------EAADHGESM-MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQ 322
+++ +++ G+ + +D E + E E K + G M +
Sbjct: 243 KDLDAHNDLGIQQSSMKGDLLPVDYESSEEEEVEEVVVNEASKPSSKKGGGFGGMFGMLK 302
Query: 323 SIAGKANLDKADLEPALKALKDRLMTKNVAA----------------------------- 353
+ G +L + D+EP L+ +K+ L+ KNVAA
Sbjct: 303 GLVGSKSLSQEDMEPVLEKMKEHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVASTV 362
Query: 354 ---MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
++++LV+IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKSTNLAK++YWL+++
Sbjct: 363 KQALQDSLVQILQPKRRVDILRDVMEAQSQRRPFVITFCGVNGVGKSTNLAKISYWLIEN 422
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEA 457
+V++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EA
Sbjct: 423 GFTVLIAACDTFRAGAVEQLRTHQRRLNALHPPEKHGGQPVVQLYEKGYGKDAAGIAMEA 482
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
I A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL K
Sbjct: 483 IAYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNMPDLVLFVGEALVGNEAVDQLVK 542
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
FNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DL+
Sbjct: 543 FNQALADHSMSEKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRS 602
Query: 578 LNVKSIVKTLLK 589
LN +++V L+K
Sbjct: 603 LNARAVVGALMK 614
>gi|299753684|ref|XP_002911906.1| signal recognition particle binding protein [Coprinopsis cinerea
okayama7#130]
gi|298410414|gb|EFI28412.1| signal recognition particle binding protein [Coprinopsis cinerea
okayama7#130]
Length = 661
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 247/695 (35%), Positives = 351/695 (50%), Gaps = 143/695 (20%)
Query: 1 MLEQLLIFTRGGLILWTCK-----ELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG++LW+ + SP+++LIR L+E R+ + D
Sbjct: 1 MLDHCSISHKGGIVLWSRSFTPDAAQLASSSASPVNSLIREALIEGRTAEEKYEKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLL---------------YVDDLLAMMKQSFSEIYD 100
Y ++WTF N+L L+FV YQRIL L Y + +A S I
Sbjct: 57 GYAVRWTFVNDLELIFVVAYQRILQLTYVDDLLSAIKTLFIKYFEPFIAAFVASLHAINT 116
Query: 101 PK----RTDYSDF-------DEMFRQLRKEAEARAEELKKSK--QVTKPMNNLKKQGGQL 147
+ +T DF D +F ++ + E +A +KS+ +P+ +L
Sbjct: 117 ARAAAVQTTSWDFSKAFEGWDNIFDKVLRGFEEKAALERKSRLRAPVRPVEDLSTP---- 172
Query: 148 QKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSS 207
++D G + ++ NV+ ++R+ G +
Sbjct: 173 ---------------PSDDQGTEPTVTADTSQDEQQIARNVQALKNRLRGRGGRRGGRGG 217
Query: 208 NIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKI-TKKNRVW-DDSPPES---KLDF 262
R+ G D+V S PK+K TK R W D+ P ES LDF
Sbjct: 218 G------------RSDAGSGRDSVPHSDSEFTPKRKTKTKAQRKWGDEVPTESDMASLDF 265
Query: 263 T------DPAGGNGSNIEVEAADHGESMMD-----KEEVFSSDSESEEDEEVGKHNKP-- 309
+ G + V+ A G D K+ FS++ + + D + +P
Sbjct: 266 SIDKPEDSEVGSHDLQSLVDQASLGTRTRDGMYEVKDWEFSTN-DKDTDNAIANVLRPIE 324
Query: 310 -DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------- 352
A T S+F + G L +ADL+P L+ +K LM KNVA
Sbjct: 325 HKAASTSALGSLFARLTGSKVLTEADLKPVLEGMKQHLMKKNVAMDIAEKVCEGVGETLV 384
Query: 353 ----------------AMEEALVRILTPRRSIDILRDVHAAK-------EQRKPYVVVFV 389
A+ +L RILTP+ S D+L + + +QR PY + FV
Sbjct: 385 GKKIGSFQTVTAAVRVALSNSLTRILTPKTSTDLLLSIKNKRASALPSGQQRMPYSITFV 444
Query: 390 GVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------------ 437
GVNGVGKSTNL+KV +WL+Q+ + V++AACDTFRSGAVEQLR H R L
Sbjct: 445 GVNGVGKSTNLSKVCFWLIQNGLRVLIAACDTFRSGAVEQLRVHVRNLGMLGVNGAGDSK 504
Query: 438 -QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+V +FE+GY KD A +AKEAI A N DVVL+DTAGRMQDNEPLMRAL+KL+ +NNP
Sbjct: 505 GRVELFERGYGKDAAGIAKEAILYAKDNDFDVVLIDTAGRMQDNEPLMRALAKLVAVNNP 564
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP---QLIDGILLTKFDTIDDKVGAAL 553
D ++FVGEALVGN+AVDQL+KF++ L D SS+ + IDG+L+TK+DT+DDKVGAAL
Sbjct: 565 DKIIFVGEALVGNEAVDQLTKFDRALRDFSSASGAGKGRGIDGMLVTKWDTVDDKVGAAL 624
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
SM YV+G P++FVGCGQ+YTDL++L V ++V +L
Sbjct: 625 SMTYVTGQPIIFVGCGQTYTDLRQLRVANVVGAIL 659
>gi|402593985|gb|EJW87912.1| hypothetical protein WUBG_01178, partial [Wuchereria bancrofti]
Length = 586
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 231/603 (38%), Positives = 334/603 (55%), Gaps = 105/603 (17%)
Query: 74 VYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD-----------YSDFDEMFRQLRKEAEA 122
VYQ + L Y D LL+ + + F ++Y +D + F+++F++L +EA+
Sbjct: 2 VYQSAIQLAYTDQLLSDVHKKFRDMYKNVLSDNKLLFSSTIRTFRQFNDVFQRLYREAQI 61
Query: 123 -----------RAEELKKSKQ-----VTKPMNN---LKKQGGQLQKGGFERGSNRSGGGS 163
+ EE +KSK+ + +P L K+ + QK ++ +
Sbjct: 62 LSTKQPDKVMRKFEESEKSKKTIASIIERPSEKSAKLLKEKEEQQKRLKQKNKEKVISSK 121
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
N G KL NG+ +V ++ E + ++ ++ + + + + K
Sbjct: 122 TN---------GSKLTNGY-DVSEMKKELPQSDATSDSPKSDTEK-EEMQRRRAEFFKKK 170
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDS-PPESKLDFTDPAGGNGSN----IEVEAA 278
G KK++ + K +N + K K+ RVWD S ++ +D D + G N E E
Sbjct: 171 GTKKSE--LEKQNNLSVESKKGKQARVWDLSGNAKTDIDSLDYSKGKSDNAVNMTEQEDR 228
Query: 279 DHGESMMD-------------KEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIA 325
E M E+ D + D+EV + N D GWFS+ F+S+
Sbjct: 229 KFVEEQMQFVGHFKGELPGLIDEQNEDLDVNEDMDDEVNEENGHD----GWFSA-FRSLV 283
Query: 326 GKANLDKADLEPALKALKDRLMTKNVAA-------------------------------- 353
G L D++P L +++ L+ KNVAA
Sbjct: 284 GNKKLTAEDIKPVLDKMRETLIAKNVAADPAEKLCQSVEVKLEGKVVGTFSRVASIVRES 343
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+ +ALV++LTP+R +DILRD+ AK +++PY++VF GVNGVGKSTNLAK+ +WL ++
Sbjct: 344 VRDALVQLLTPKRRVDILRDILEAKREKRPYIIVFCGVNGVGKSTNLAKITFWLNENGHK 403
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQV------PIFEKGYEKDPAIVAKEAIQEATRNGSD 467
V++AA DTFR+GAVEQLRTH + L V ++E+GY KDPA +A AI A G+D
Sbjct: 404 VLIAAADTFRAGAVEQLRTHTKHLNVLHPNSVQLYEQGYGKDPAGLAAAAISIAVERGTD 463
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVLVDTAGRMQDNEPLMR+L+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD ++
Sbjct: 464 VVLVDTAGRMQDNEPLMRSLAKLIQVNQPDLVLFVGEALVGNEAVDQLVKFNQALADHAA 523
Query: 528 -SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK LN ++V +
Sbjct: 524 LGTEGRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYKDLKSLNANAVVHS 583
Query: 587 LLK 589
LLK
Sbjct: 584 LLK 586
>gi|344291488|ref|XP_003417467.1| PREDICTED: signal recognition particle receptor subunit alpha-like
isoform 2 [Loxodonta africana]
Length = 611
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 339/661 (51%), Gaps = 123/661 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQ-------------------- 39
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 40 ------------VGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 87
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F +L +EAE +S ++ P K + + K G +S
Sbjct: 88 DFLRLLREAE-------ESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKTKNSK 140
Query: 172 NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKG 224
G+K + + + + TGV G EN ++SK + +R K
Sbjct: 141 KKGGKKEGSDGGPLATGKADSVVKTGVPVGPEN------GVELSKEELVRRKREEFMQKH 194
Query: 225 GKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE-------V 275
G+ + + PK+K K RVW +K LD++ P + +
Sbjct: 195 GRGVEKSSKSLKSDAPKEKGKKAPRVWALGGCANKDVLDYSTPTTNGTPEVALPEDINLI 254
Query: 276 EAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANLDKA 333
G + D + S D E+ + KP A K G M + + G +L +
Sbjct: 255 RGTGPGGQLQDLDCSSSDDDEASQ-----STTKPSATKGTLGGMFGMLKGLVGSKSLSRE 309
Query: 334 DLEPALKALKDRLMTKNVAA--------------------------------MEEALVRI 361
D+E L ++D L+ KNVAA ++E+LV+I
Sbjct: 310 DMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQI 369
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
L P+R +D+LRD+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDT
Sbjct: 370 LQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDT 429
Query: 422 FRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
FR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A G DV
Sbjct: 430 FRAGAVEQLRTHTRRLTALHPPENHSGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDV 489
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S +
Sbjct: 490 VLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMA 549
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+
Sbjct: 550 QTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 609
Query: 589 K 589
K
Sbjct: 610 K 610
>gi|296471767|tpg|DAA13882.1| TPA: signal recognition particle receptor subunit alpha [Bos
taurus]
Length = 597
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 238/627 (37%), Positives = 335/627 (53%), Gaps = 109/627 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 115
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ K + G
Sbjct: 116 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKK 175
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-- 221
DG + E +G+ G EN ++SK +++R
Sbjct: 176 EGSDGPLATSKAAPAEK---------------SGLPVGPENGE------ELSKEEQIRRK 214
Query: 222 -----NKGGKKTDTVVSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIE 274
K G+ + + PK+K K RVW S + LD++ P +N
Sbjct: 215 REEFIQKHGRGMEKSSKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPT----TNGA 270
Query: 275 VEAADHGESMMDK-----EEVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAG 326
EAA + + + ++ D S +DE +++ KP A K G M + + G
Sbjct: 271 PEAAPPEDINLIRGTGPGRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVG 330
Query: 327 KANLDKADLEPALKALKDRLMTKNVAA--------------------------------M 354
+L + D+E L ++D L+ KNVAA +
Sbjct: 331 SKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQAL 390
Query: 355 EEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSV 414
+E+LV+IL P+R +D+LRD+ A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV
Sbjct: 391 QESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSV 450
Query: 415 MMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEA 461
++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI A
Sbjct: 451 LIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFA 510
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+
Sbjct: 511 RNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRA 570
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDK 548
LAD S + P+LIDGI+LTKFDTIDDK
Sbjct: 571 LADHSMAQTPRLIDGIVLTKFDTIDDK 597
>gi|195048490|ref|XP_001992537.1| GH24806 [Drosophila grimshawi]
gi|193893378|gb|EDV92244.1| GH24806 [Drosophila grimshawi]
Length = 628
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 224/322 (69%), Gaps = 45/322 (13%)
Query: 313 KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------- 352
KTG S F+ I G + +DL+PAL+ ++D L++KNVA
Sbjct: 307 KTGGLLSYFKGIVGAKTMTLSDLQPALEKMRDHLISKNVASEIAGKLCDSVATSLEGKQM 366
Query: 353 ------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNL 400
A+ ++LVRIL+P+R IDI+RD +K +PY ++F GVNGVGKSTNL
Sbjct: 367 GTFDSIANMVKEALTQSLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNL 426
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR-------------RLQVPIFEKGYE 447
AK+ +WL+++ +V++AACDTFR+GAVEQLRTH R R V ++EKGY
Sbjct: 427 AKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAVKHNNRTMVQLYEKGYG 486
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
KD A +A EAI+ A DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALV
Sbjct: 487 KDAAGIAMEAIKFANDTKIDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALV 546
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GN+AVDQL KFNQ LAD SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG
Sbjct: 547 GNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVG 606
Query: 568 CGQSYTDLKKLNVKSIVKTLLK 589
GQ+Y DLK +NV ++V +L+K
Sbjct: 607 TGQTYADLKAINVNAVVNSLMK 628
>gi|328787996|ref|XP_395013.3| PREDICTED: signal recognition particle receptor subunit alpha
homolog isoform 1 [Apis mellifera]
Length = 614
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 220/323 (68%), Gaps = 45/323 (13%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------ 353
KKT SMF+S+ G L D+ P L LKD L++KNVAA
Sbjct: 292 KKTNSMFSMFKSLVGNKCLKHEDMAPVLDKLKDHLISKNVAADIAKKLCDSVGVKLEGKI 351
Query: 354 --------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
+ +ALV+IL+P+R +DILRD AK +PYV+ F GVNGVGKSTN
Sbjct: 352 LGTFDSVASTVKATLTDALVQILSPKRRVDILRDAMEAKNNHRPYVMTFCGVNGVGKSTN 411
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGY 446
LAK+ +WL+++ V++AACDTFR+GAVEQLRTH R L V ++EKGY
Sbjct: 412 LAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHMRHLNALHPPEKHGNQSMVQLYEKGY 471
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A +A EAI+ A + D+VLVDTAGRMQDNEPLMRAL+KLI +N PD+VLFVGEAL
Sbjct: 472 GKDAAGIAMEAIRFAKDSKIDIVLVDTAGRMQDNEPLMRALAKLIKVNEPDVVLFVGEAL 531
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VGN+AVDQL KFNQ LAD S S NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FV
Sbjct: 532 VGNEAVDQLVKFNQALADHSQSSNPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFV 591
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ+YTDLK LN K++V L+K
Sbjct: 592 GTGQTYTDLKSLNAKAVVHALMK 614
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW C + + + ++ LIRS +L+ERSG SF YDS L+
Sbjct: 1 MLDLFTIFSKGGIVLW-CFQSTSQIFAPSVNALIRSVILQERSGNHSFEYDS----LRLQ 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLL 88
+ NE LVFV YQ+IL L Y+D L
Sbjct: 56 YKLDNEFELVFVVAYQKILQLSYIDKFL 83
>gi|290974685|ref|XP_002670075.1| signal recognition particle receptor alpha subunit family protein
[Naegleria gruberi]
gi|284083630|gb|EFC37331.1| signal recognition particle receptor alpha subunit family protein
[Naegleria gruberi]
Length = 678
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/316 (55%), Positives = 219/316 (69%), Gaps = 38/316 (12%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------- 352
KK FS+ F ++ L K DL+P ++ K LM KNVA
Sbjct: 363 KKGNIFSTFFSNLTNGRTLTKEDLDPVMEDFKQSLMKKNVAQEIAVSICDSVSENLVGKK 422
Query: 353 -------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
AMEEAL RILTP R+I+IL++ +EQ +PYV+V GVNGVGKST
Sbjct: 423 LGTFSSIKSEVTKAMEEALTRILTPSRTINILKEASTVREQGRPYVIVMCGVNGVGKSTT 482
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
L+K+ YWLLQ + S ++AACDTFRSGAVEQL+ HAR L VP+F+KGY K+ A +AKEAI
Sbjct: 483 LSKICYWLLQKEFSCLIAACDTFRSGAVEQLQVHARCLNVPVFQKGYGKNAASLAKEAIN 542
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A +NG D+VLVDTAGRMQDNEPLM++L +LI +N PDLVLFVGEALVGND +DQL KFN
Sbjct: 543 HAKKNGFDIVLVDTAGRMQDNEPLMKSLIELIQVNTPDLVLFVGEALVGNDGIDQLQKFN 602
Query: 520 QKLADLSSSPNP------QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
L L+SS N LIDGI+LTKFDTID+KVGAA+SMV+ +G P++FVG GQ+YT
Sbjct: 603 SSLKVLASSENAATKQTKDLIDGIVLTKFDTIDEKVGAAVSMVHKTGHPIVFVGVGQTYT 662
Query: 574 DLKKLNVKSIVKTLLK 589
DL+ L V+S+VK+LLK
Sbjct: 663 DLRTLKVESVVKSLLK 678
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 30/163 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ I T+GGL+L++ G AL G+PI+ LIRS LLE+R +FNY + Y L
Sbjct: 1 MIDNFTILTKGGLVLYSF--TGFALNGNPINELIRSVLLEDRLSDKTFNYQNE---YLLT 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
W NE L+FV V+Q + + ++D LL +K F+ F+++ ++A
Sbjct: 56 WLQENEFDLIFVVVHQIAIQITFIDTLLENIKNKFT--------------STFKKVLQDA 101
Query: 121 EARAE--------ELKKSKQVTKPMNNLK---KQGGQLQKGGF 152
+ + + E K+ TK +NNL+ ++ QLQK G
Sbjct: 102 KGKGKGMSVLSEHEFSFDKEFTKILNNLEERSREEKQLQKEGL 144
>gi|345484697|ref|XP_001599499.2| PREDICTED: signal recognition particle receptor subunit alpha
homolog isoform 1 [Nasonia vitripennis]
Length = 590
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/323 (55%), Positives = 226/323 (69%), Gaps = 45/323 (13%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------ 353
KK+G S+F+++ G L + D+ P L+ LKD L++KNVAA
Sbjct: 268 KKSGGVFSIFKNLVGNKALKEEDMRPVLEKLKDHLISKNVAAEIAQKLCDSICVKLEGKV 327
Query: 354 --------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
+ +ALV+IL+P+R +DILRD AK+ +PYV+ F GVNGVGKSTN
Sbjct: 328 LGTFDSVANTVKASLTDALVQILSPKRRVDILRDAFEAKKNGRPYVMAFCGVNGVGKSTN 387
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGY 446
LAK+ +WL+++ V++AACDTFR+GAVEQLRTH + L V ++EKGY
Sbjct: 388 LAKICFWLIENNFRVLIAACDTFRAGAVEQLRTHMKHLNALHPPEKHGNMTMVQLYEKGY 447
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A +A EAI+ AT + DVVLVDTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEAL
Sbjct: 448 GKDAAGIAMEAIRFATDSRFDVVLVDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEAL 507
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VGN+AVDQL KFNQ LAD S+S NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FV
Sbjct: 508 VGNEAVDQLVKFNQALADYSNSTNPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFV 567
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ+YTDLK LN K++V L+K
Sbjct: 568 GTGQTYTDLKSLNAKAVVHALMK 590
>gi|328857956|gb|EGG07070.1| hypothetical protein MELLADRAFT_35731 [Melampsora larici-populina
98AG31]
Length = 601
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 243/657 (36%), Positives = 343/657 (52%), Gaps = 125/657 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG---AAY 57
ML+ IF RGG++LW+ + SP+ +I L+E + S D+ AY
Sbjct: 1 MLDHFHIFHRGGIVLWSKAFVSTP---SPVRQIISQALIEPSTN-HSNQQDAQSLHLGAY 56
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD------FDE 111
+++W N+LGLVF YQRIL L Y+++LL ++ F +Y P + + F +
Sbjct: 57 SVQWRLSNDLGLVFAVAYQRILQLTYINELLEAVQSLFLSLYAPLINNVLNPSSSIAFSK 116
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSD 171
F + + E R L K E G+N
Sbjct: 117 GFMSVFEGWENRFMCLLKE---------------------LEAGANSQS----------- 144
Query: 172 NMRGRKLENGH--SNVGNVEIEE----SRVTGVANGKENTSSNIGAFDVSKLQKLRNKGG 225
R +KL + H S + E+E S+ + A E + NI A + + +K
Sbjct: 145 --RAKKLISDHHQSAIQRAEVERMSDNSQRSTTATDSETIARNIAALKARRRKPTGSKAS 202
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE----SKLDFTD----PAGGNGSNIEVEA 277
++ T G P P++ R WDD S+ D+++ PA N +I+
Sbjct: 203 SRSGTDTETG-GPKPQQA----RRKWDDGTMSAQDISQYDYSEDVDIPAASN--SIKNLI 255
Query: 278 ADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIA--GKAN----LD 331
D+ + +KE V+ ++ E G G F+ ++ G++N L
Sbjct: 256 DDNALGIRNKEGVYEVADYEDKKELTG----------GIFARFLNNLPFIGRSNTSPTLT 305
Query: 332 KADLEPALKALKDRLMTKNVA-------------------------------AMEEALVR 360
A+L P L+ ++ +L+ KNVA A+ +L +
Sbjct: 306 SAELNPILQQMQTQLLKKNVARSVAEEICDKLGVELLGKKRDGTSLRELVRDALSTSLRQ 365
Query: 361 ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACD 420
ILTPR S+D+L +V ++ KPYV+ FVGVNGVGKSTNLAKVA+WLLQ+++ V++AACD
Sbjct: 366 ILTPRTSVDLLMEVRR-RQSGKPYVITFVGVNGVGKSTNLAKVAFWLLQNRLRVLIAACD 424
Query: 421 TFRSGAVEQLRTHARRLQ--------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
TFRSGAVEQLRTH R L V +FEKGY KD A +AK AI A NG DVVL+D
Sbjct: 425 TFRSGAVEQLRTHVRNLSSIDQPNGMVELFEKGYGKDAAGIAKAAIAHAETNGFDVVLID 484
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLMRAL KLI +N PD V+FVGEALVGN+AVDQL FN + S P +
Sbjct: 485 TAGRMQDNEPLMRALGKLISVNEPDKVIFVGEALVGNEAVDQLQGFNTSIQKF-SGPISR 543
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+DG++LTKFDTIDD+VGAA+SM +V+ P+ FVG GQ+YTDL+ L V +V+ L++
Sbjct: 544 SLDGMILTKFDTIDDQVGAAVSMTFVTRQPIWFVGTGQTYTDLRVLRVGHVVEALMR 600
>gi|15214760|gb|AAH12512.1| Srpr protein, partial [Mus musculus]
Length = 359
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 228/343 (66%), Gaps = 47/343 (13%)
Query: 294 DSESEEDEEVGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV 351
D S +DE ++ KP A K G M + + G +L + D+E L ++D L+ KNV
Sbjct: 16 DCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNV 75
Query: 352 AA--------------------------------MEEALVRILTPRRSIDILRDVHAAKE 379
AA ++E+LV+IL P+R +D+LRD+ A+
Sbjct: 76 AADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQR 135
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-- 437
+++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RRL
Sbjct: 136 RQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTA 195
Query: 438 -----------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
V +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN PLM A
Sbjct: 196 LHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTA 255
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTID
Sbjct: 256 LAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTID 315
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 316 DKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 358
>gi|119588088|gb|EAW67684.1| signal recognition particle receptor ('docking protein'), isoform
CRA_a [Homo sapiens]
gi|119588089|gb|EAW67685.1| signal recognition particle receptor ('docking protein'), isoform
CRA_a [Homo sapiens]
Length = 414
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/409 (47%), Positives = 254/409 (62%), Gaps = 67/409 (16%)
Query: 240 PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGS---------NIEVEAADHGESMMDKE 288
PK+K K RVW+ +K LD++ P NG+ N+ + G + D
Sbjct: 13 PKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINL-IRGTGSGGQLQDL- 69
Query: 289 EVFSSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
D S +DE +++ KP A K G M + + G +L + D+E L ++D
Sbjct: 70 -----DCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDH 124
Query: 346 LMTKNVAA--------------------------------MEEALVRILTPRRSIDILRD 373
L+ KNVAA ++E+LV+IL P+R +D+LRD
Sbjct: 125 LIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRD 184
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
+ A+ +++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH
Sbjct: 185 IMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTH 244
Query: 434 ARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDN 480
RRL V +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN
Sbjct: 245 TRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDN 304
Query: 481 EPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLT 540
PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LT
Sbjct: 305 APLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLT 364
Query: 541 KFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
KFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 365 KFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 413
>gi|443925308|gb|ELU44168.1| signal recognition particle binding protein [Rhizoctonia solani
AG-1 IA]
Length = 674
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 231/642 (35%), Positives = 343/642 (53%), Gaps = 99/642 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLAS-FNYDSAGAAYTL 59
ML+ I +GG ILW+ ++ SP+++L+R ++++R+ F D Y +
Sbjct: 1 MLDHCSISHKGGAILWSRSFTPSS---SPVNSLVREAIIQDRTAPEDVFEKD----GYAI 53
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKE 119
K+ F N+L L+FV YQRIL L YVDDLL +M+ F +++ P + +
Sbjct: 54 KFKFVNDLELIFVVAYQRILQLTYVDDLLNVMRSVFVDMFAPFLKSFLAAVHAGTGVVTR 113
Query: 120 AEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLE 179
+ +A+ + + K + L+ + Q +K + + R ++ +
Sbjct: 114 FDFKAQFAEWDQTFDKILRTLQDKAAQERKSRLGKPTPRVALPVTPPSDNAPALAAETPT 173
Query: 180 NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPD 239
+ NV+ +SR+ G G+ + + GG +DT +
Sbjct: 174 DAEEIARNVQALKSRLKGQPKGRARRTPAATSV-----------GGSDSDT------SHT 216
Query: 240 PKKKITKKNRVWDDSPPE----SKLDFTD-PAGGNGS-----NIEVEAADHGESMMD--- 286
P+KK K R W DS + LD++ P+ + S ++ V+ + G D
Sbjct: 217 PRKKPAKTARRWADSALSVEDMAALDYSSAPSDVDISRSVDLSLLVDESSRGAVGADGMY 276
Query: 287 --KEEVFSSDSESEEDEEV-----GKHNKPDAKKTGWFSSMFQSIA----GKANLDKADL 335
K+ ++S+S+ E+ E++ K N+ ++T S+ + ++ G L DL
Sbjct: 277 EVKDLDWASNSKDEDTEDLISRALSKTNQEQKQETSVSSTAWSWLSRLTGGGKVLTSEDL 336
Query: 336 EPALKALKDRLMTKNVA--------------------------------AMEEALVRILT 363
P L +++ LM KNVA A+ A+ RILT
Sbjct: 337 TPVLNGMREHLMKKNVAKEIADKICESVGEGLVGKRVSGFASIKSETRTALSSAITRILT 396
Query: 364 PRRSIDIL---RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACD 420
P+ S D+L R AA+ +PYV+ FVGVNGVGKST+L KVA+WLLQ+ + V++AACD
Sbjct: 397 PKTSTDLLLSIRSQKAAQPTPQPYVITFVGVNGVGKSTSLGKVAFWLLQNNLRVLVAACD 456
Query: 421 TFRSGAVEQLRTHARRL------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
TFRSGAVEQLR H R L ++ ++EKGY KD A +AKEAI A++ DV
Sbjct: 457 TFRSGAVEQLRVHVRNLGMLNNNTSEGGEKIELYEKGYGKDAAGIAKEAIAYASQRDYDV 516
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VLVDTAGRMQDNEPLM+AL+KL +N PD ++FVGEALVGN+AVDQLSKF++ L D S
Sbjct: 517 VLVDTAGRMQDNEPLMKALAKLAAVNQPDKIIFVGEALVGNEAVDQLSKFDRALKDFS-- 574
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
N + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGCGQ
Sbjct: 575 -NGRGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGCGQ 615
>gi|281202878|gb|EFA77080.1| signal recognition particle receptor alpha subunit [Polysphondylium
pallidum PN500]
Length = 669
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 214/311 (68%), Gaps = 35/311 (11%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------- 352
K F FQ++ G +D DLEP L+ LK L +KNVA
Sbjct: 359 KPVSGFMKYFQTLTGSRTIDNNDLEPILQKLKSHLTSKNVALDIAEKLVDSVGQSLQGKK 418
Query: 353 -------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
AMEEA+ RILTP+++IDILRDV A + R PY +VF GVNGVGKSTN
Sbjct: 419 LSTFQGVNSVVKQAMEEAVTRILTPKKTIDILRDVQAVRGTR-PYTIVFSGVNGVGKSTN 477
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
LAK+ YWL H VMMAACDTFRSGA+EQL+THA RL V +FE+GY KD A +A EAI
Sbjct: 478 LAKICYWLTAHGYKVMMAACDTFRSGAIEQLKTHAERLNVEVFERGYGKDAASIAGEAID 537
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A DVVL+DT GRMQ+NEPLMRALSKL+ N DLVLFVGEALVGND VDQL KF+
Sbjct: 538 YARATNHDVVLIDTTGRMQNNEPLMRALSKLVNQNTIDLVLFVGEALVGNDGVDQLVKFD 597
Query: 520 QKLADLSSSPNPQL--IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
+ L+ L+ S ++ IDGI+LTKFDTIDDKVGAA+SMVY +G P++F+G GQ+YTDLK+
Sbjct: 598 KSLSLLADSTQTKVRTIDGIILTKFDTIDDKVGAAISMVYSTGHPIIFLGTGQNYTDLKR 657
Query: 578 LNVKSIVKTLL 588
+NVK +VK+LL
Sbjct: 658 MNVKVVVKSLL 668
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 6/99 (6%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ I T+GG++L + + LKG PI+ LIR L++ER SF D+ YTLK
Sbjct: 1 MIDNFTILTKGGIVLLSIE--WARLKGHPINNLIRKVLVQERGSETSFQSDN----YTLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
WTF NE+ L+FV VYQ+IL L+Y+D+LL ++K+ F ++Y
Sbjct: 55 WTFANEVDLIFVVVYQKILSLMYIDELLNVVKRKFVKMY 93
>gi|427797013|gb|JAA63958.1| Putative signal recognition particle receptor alpha subunit,
partial [Rhipicephalus pulchellus]
Length = 542
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/435 (46%), Positives = 261/435 (60%), Gaps = 67/435 (15%)
Query: 218 QKLRNK--GGKKTDTVVSKGS-NPDPKKKITKKNRVWDDSPPESKLDFTDPAGG------ 268
QKL K G KK+D KG+ +P K +KK R+WD S L D + G
Sbjct: 112 QKLFEKLQGKKKSD----KGAKSPAAAKDKSKKPRIWDHGGKSSDLKTLDYSEGAPPEGE 167
Query: 269 -NGSNIEVEAADH-------GESMMDKEEVFSSDSESEEDEEVG-KHNKPDAKKTGWFSS 319
NG + ++ A+ G + D E S + EED V K K+G
Sbjct: 168 ENGRSEDILTAESRSWVGKGGGEIKDMEYSESEEEMEEEDAHVSSKQKSTKGGKSGGMFG 227
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------------------- 353
MF+ + G ++ D+ P L L+D L+ KNVAA
Sbjct: 228 MFRGLVGSKSITAEDMAPVLDKLRDHLIAKNVAADVSQKLCDSVGARLEGRVLGSFTGVA 287
Query: 354 ------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +ALV++L+P+R +++LRDV A+ +P+V+ F GVNGVGKSTNLAK+ +WL
Sbjct: 288 STVRATLVDALVQLLSPKRRVNLLRDVLEAQRASRPFVITFCGVNGVGKSTNLAKICFWL 347
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVA 454
+++ V++AACDTFR+GAVEQLRTH R L V ++EKGY KD A +A
Sbjct: 348 IENNCRVLIAACDTFRAGAVEQLRTHMRHLNALHPPEKHGGKQMVQLYEKGYGKDAAGIA 407
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
EAI A DVVL+DTAGRMQDNEPLMRAL+KLI +N PDLVLFVGEALVGN+AVDQ
Sbjct: 408 MEAINYARETKIDVVLIDTAGRMQDNEPLMRALAKLITVNKPDLVLFVGEALVGNEAVDQ 467
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
L KFNQ LAD SS NP LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y D
Sbjct: 468 LVKFNQALADHSSEENPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYID 527
Query: 575 LKKLNVKSIVKTLLK 589
LK +N K++V L+K
Sbjct: 528 LKTINAKAVVHALMK 542
>gi|350588626|ref|XP_003130105.2| PREDICTED: signal recognition particle receptor subunit alpha
isoform 2, partial [Sus scrofa]
Length = 570
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 319/586 (54%), Gaps = 89/586 (15%)
Query: 75 YQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDEMFRQLRKEAEARAE 125
+Q+IL L YVD L+ + + F + Y + S DF F +L +EAE
Sbjct: 2 FQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQNDFLRLLREAE---- 57
Query: 126 ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNV 185
+S ++ P K + + K R + G + + +G K E +
Sbjct: 58 ---ESSKIRAPTTMKKFEDSEKSKKPV-RSMIETRGEKPKEKAKNSKKKGAKKEGSDGPL 113
Query: 186 GNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR-------NKGGKKTDTVVSKGSNP 238
+ + +GV G EN ++SK + +R K G+ + +
Sbjct: 114 ATSKAVPTEKSGVPVGPEN------GVELSKEELIRRKREEFIQKHGRGVEKSGKSTKSD 167
Query: 239 DPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKE-----EVF 291
PK+K K RVW S + LD++ P +N EAA + + + ++
Sbjct: 168 APKEKGKKAPRVWALGGSANKEVLDYSTPT----TNGAPEAAPPEDINLIRGTGPGGQLQ 223
Query: 292 SSDSESEEDEEVGKHN-KPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMT 348
D S +DE +++ KP + K G M + + G +L + D+E L ++D L+
Sbjct: 224 DLDCSSSDDEGATQNSTKPSSTKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIA 283
Query: 349 KNVAA--------------------------------MEEALVRILTPRRSIDILRDVHA 376
KNVAA ++E+LV+IL P+R +D+LRD+
Sbjct: 284 KNVAADIAVQLCESVASKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMD 343
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
A+ ++PYVV F GVNGVGKSTNLAK+++WLL++ SV++AACDTFR+GAVEQLRTH RR
Sbjct: 344 AQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRR 403
Query: 437 LQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
L V +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN PL
Sbjct: 404 LSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPL 463
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
M AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFD
Sbjct: 464 MTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFD 523
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
TIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 524 TIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 569
>gi|198433605|ref|XP_002122258.1| PREDICTED: similar to mCG7475 [Ciona intestinalis]
Length = 639
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 219/323 (67%), Gaps = 45/323 (13%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------ 353
K +G SMF+ + G L K L+P L +++D L+ KNVAA
Sbjct: 317 KSSGGIFSMFRGLVGSKALTKEALQPVLNSMRDHLIGKNVAADIAEKMCDSVANKLEGKM 376
Query: 354 --------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
+ ++LV ILTP+R +DILRDV A+ KPYV+ F GVNGVGKSTN
Sbjct: 377 VGTFSTIASTVKQSLNDSLVLILTPKRRVDILRDVLEAQRAGKPYVITFCGVNGVGKSTN 436
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGY 446
LAK+ +WL+++ VM+AACDTFR+GAVEQLRTH RL V +FEKGY
Sbjct: 437 LAKICFWLMENGFRVMIAACDTFRAGAVEQLRTHKTRLHTLHPPSMHGGRDGVNLFEKGY 496
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A +A +AI A DVVLVDTAGRMQDNEPLMR+L+KLI +N+PDLVLFVGEAL
Sbjct: 497 GKDAAGIAMQAINAAREQRYDVVLVDTAGRMQDNEPLMRSLAKLITVNSPDLVLFVGEAL 556
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VGN+AVDQL KFNQ LAD S++ NP+ IDGI+LTKFDTIDDKVGAA+SM Y +G P++FV
Sbjct: 557 VGNEAVDQLVKFNQALADYSNAENPRSIDGIVLTKFDTIDDKVGAAISMTYTTGQPIVFV 616
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQSY DL++LN K++V LLK
Sbjct: 617 GTGQSYPDLRRLNAKAVVHALLK 639
>gi|326436082|gb|EGD81652.1| hypothetical protein PTSG_02368 [Salpingoeca sp. ATCC 50818]
Length = 668
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 240/362 (66%), Gaps = 48/362 (13%)
Query: 276 EAADHGESMMDKEEVFSSDSE----SEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLD 331
+AA E + D + F +D E + D++ N + TG ++F+ I G + +
Sbjct: 303 QAARMAEGVQDVDFGFDADEELLGQEDGDDDGNAANASASTTTGSLFTLFRKITGTSEMT 362
Query: 332 KADLEPALKALKDRLMTKNVAA--------------------------------MEEALV 359
K +++P L ++ LM KNVAA +EE+L
Sbjct: 363 KENVQPILDQMQQHLMAKNVAADVAAKLCASVGEKLVGRTKGTFTTIKSVVKQALEESLT 422
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
+IL+P+R IDILRDV AA+++ +P+ +VF GVNGVGKSTNL+K+A+WLL + + VM+AAC
Sbjct: 423 QILSPKRQIDILRDVRAAQQEGRPFSMVFCGVNGVGKSTNLSKIAFWLLSNNMRVMIAAC 482
Query: 420 DTFRSGAVEQLRTHARRLQ------------VPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
DTFRSGAVEQLRTH R+L+ V ++++GY ++ A VA +AI+ A D
Sbjct: 483 DTFRSGAVEQLRTHCRKLRTMLDDTDDAHPRVVVYDRGYGRNDAEVAADAIRIAKSEKYD 542
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVL+DTAGRMQDN PLMR+L++LI N PDLVLFVGEALVGN+AVDQL+KFN+ L D S
Sbjct: 543 VVLIDTAGRMQDNAPLMRSLTQLIRTNKPDLVLFVGEALVGNEAVDQLTKFNRALQDYSE 602
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
NP++IDGILLTKFDT+DDKVG+++SM Y++G P++FVG GQ Y DL+KLNVKS+V L
Sbjct: 603 ERNPRVIDGILLTKFDTVDDKVGSSISMTYITGQPIVFVGTGQHYFDLRKLNVKSVVSAL 662
Query: 588 LK 589
LK
Sbjct: 663 LK 664
>gi|145545839|ref|XP_001458603.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426424|emb|CAK91206.1| unnamed protein product [Paramecium tetraurelia]
Length = 585
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 235/663 (35%), Positives = 336/663 (50%), Gaps = 152/663 (22%)
Query: 1 MLEQLLIFTRGGLILW---TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY 57
M++ + I T GG+IL+ C+ +K + +I CL ++++ L +
Sbjct: 1 MIDLVSIITTGGVILFYKALCQ-----IKEDVLGKVIDGCL-QQKTSLQL-------GSM 47
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP---KRTDY-------S 107
++W NELGL+F+ YQ I + Y+D LL M++ F +IY+P ++ Y S
Sbjct: 48 KVQWVILNELGLIFIVSYQEIFFIQYIDVLLKMLQTQFKQIYNPAIKQKGIYKSIPEFDS 107
Query: 108 DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDD 167
F+E+ + + + R+E+ K+ P +Q Q Q FE
Sbjct: 108 GFEEVMKMWQLYCDKRSEKEKEG-----PTRTQDQQ--QEQFSTFE-------------- 146
Query: 168 GDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKK 227
K+E G++ N N G +SK + ++ K +K
Sbjct: 147 --------PKVETGNT-------------------PNEEPNDGQQKLSKSEIIKMKMQQK 179
Query: 228 TDTVVSKGSNPDPKKKITKKNRVWDDSPPES-------------KLDFTDPAGGNGSNIE 274
+ T K P+ K+ V SP +S LDFT + +
Sbjct: 180 SGTRSPKDGAKSPQD--GAKSPVDSRSPKQSVIMNTNITKKQIDSLDFT-----SKGQTQ 232
Query: 275 VEAADHGESMMDKEE-------------VFSSDSESEEDEEVGKHNKPDAKKTGWFSSM- 320
V++ + + M ++E +F SD E N KK G F +
Sbjct: 233 VQSNQNEKYMTQEQEDDLLKQFIGDDDPLFGSDDE----------NPKQQKKQGLFQKLT 282
Query: 321 --FQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
Q++ G L + DL P L K+ LM KNVA
Sbjct: 283 GKIQNLTGNKQLTEEDLLPVLDDFKNALMQKNVAEEIAQKLVDSIKTNLLATKTKAFQSI 342
Query: 353 ------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
AM+ L RILTP R IDI+ + AKE++KPYV+V +GVNGVGKST LAK+ Y
Sbjct: 343 RTSVQEAMKSTLTRILTPNRHIDIIAEALRAKEKQKPYVIVIIGVNGVGKSTTLAKLGYL 402
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
S+M+AACD FR+GAVEQL+TH + L +P++++GY+ DP +A +AI+EAT
Sbjct: 403 FKSQGFSLMIAACDNFRAGAVEQLKTHGQCLGIPVYDRGYKDDPPEIAYQAIREATIKKI 462
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVLVDTAGRMQ NEPLMRALS+++ +NNPDLVLFVGEALVGND VDQL FN+ L S
Sbjct: 463 DVVLVDTAGRMQHNEPLMRALSRIVTMNNPDLVLFVGEALVGNDGVDQLVNFNKALIVNS 522
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
N + ID I+L+KFDT+D+KVGAALS+ +G P++FVG GQ YT LKKLNV ++V+
Sbjct: 523 PKDNVREIDAIILSKFDTVDEKVGAALSLTSATGKPILFVGVGQKYTHLKKLNVNTVVRA 582
Query: 587 LLK 589
LL+
Sbjct: 583 LLQ 585
>gi|313231336|emb|CBY08451.1| unnamed protein product [Oikopleura dioica]
Length = 587
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/309 (54%), Positives = 217/309 (70%), Gaps = 38/309 (12%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------------- 353
SMF+++ + L +A ++P L+ KD L++KNVA+
Sbjct: 279 SMFKTLVSQKELTEASIDPILQKYKDNLISKNVASEIATKLISAVKNKLVGQTIGTFSSI 338
Query: 354 -------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+EE+LV+ILTPRR +DILRDV AK + +PY + F GVNGVGKSTNLAK+ +W
Sbjct: 339 KKAVFNGLEESLVQILTPRRRVDILRDVLHAKGEGRPYSITFCGVNGVGKSTNLAKICFW 398
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQE 460
L+++ +M+AACDTFR+GAVEQL+TH R+ V +FE+GY KDPA +A AI
Sbjct: 399 LVENGFRIMIAACDTFRAGAVEQLKTHVHRINGVHADSVKLFEQGYGKDPATIAMHAISA 458
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A G DV L+DTAGRMQDNEPLMRAL+KLI +N PD VLFVGEALVGNDA+DQL+KFN+
Sbjct: 459 ARDQGYDVCLIDTAGRMQDNEPLMRALAKLIAINRPDAVLFVGEALVGNDAIDQLTKFNK 518
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LA+ S S NP+LIDGI+L+KFDTIDDKVGAA+SM Y +G P++F+G GQ+Y DL LN
Sbjct: 519 SLANHSQSNNPRLIDGIVLSKFDTIDDKVGAAISMTYTTGQPIVFIGTGQTYKDLNSLNP 578
Query: 581 KSIVKTLLK 589
K++V LL+
Sbjct: 579 KAVVNLLLR 587
>gi|224613354|gb|ACN60256.1| Signal recognition particle receptor subunit alpha [Salmo salar]
Length = 521
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 221/325 (68%), Gaps = 48/325 (14%)
Query: 313 KTGWFSSMF---QSIAGKANLDKADLEPALKALKDRLMTKNVAA---------------- 353
K G F MF + + G +L + D+EP L ++D L+ KNVAA
Sbjct: 196 KKGAFGGMFGMLKGLVGSKSLSQEDMEPVLDKMRDHLIAKNVAAEIASQLCGSVAKKLEG 255
Query: 354 ----------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
++++LV+IL P+R +DILRDV A+ QR+P+V+ F GVNGVGKS
Sbjct: 256 KVMGTFTTVASTVKGALQDSLVQILQPKRRVDILRDVLEARSQRRPFVITFCGVNGVGKS 315
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEK 444
TNLAK+++WL+++ +V++AACDTFR+GAVEQLRTH RRL V ++EK
Sbjct: 316 TNLAKISFWLIENGFTVLIAACDTFRAGAVEQLRTHQRRLNSLHPPQDHGGRPIVQLYEK 375
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A +A EAI A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGE
Sbjct: 376 GYGKDAAGIAMEAIAYARNQAFDVVLVDTAGRMQDNTPLMTALAKLIAVNMPDLVLFVGE 435
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVGN+AVDQL KFNQ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++
Sbjct: 436 ALVGNEAVDQLVKFNQALADHSMSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIV 495
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLLK 589
FVG GQ+Y DL+ LN +++V L+K
Sbjct: 496 FVGTGQTYNDLRSLNARAVVGALMK 520
>gi|387915970|gb|AFK11594.1| signal recognition particle receptor subunit alpha isoform 2
[Callorhinchus milii]
Length = 640
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/417 (46%), Positives = 258/417 (61%), Gaps = 64/417 (15%)
Query: 236 SNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNI--------EVEAADHGESM- 284
++ PK + K++R W D LD++ P+ NG + + H ESM
Sbjct: 224 TSKSPKPRKPKQDRKWSLDQKASAKGLDYS-PSLVNGQSTVSNSGDNSSSNMSKHLESMK 282
Query: 285 -----MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGW--FSSMFQSIAGKANLDKADLEP 337
+D + S + E EE + + +K K+ G+ M + + G +L D+EP
Sbjct: 283 GNLKDVDHDSSDSEEQEEEEHSVIQEVSKTSEKRAGFGGMLGMLKGLVGSKSLTPQDMEP 342
Query: 338 ALKALKDRLMTKNVAA--------------------------------MEEALVRILTPR 365
L+ +KD L+ KNVAA ++++LV+IL P+
Sbjct: 343 VLEKMKDHLIAKNVAADIAVQLCESVAKKLEGKVMGTFSTVTSTVKQALQDSLVQILQPK 402
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
R +DILRDV A++QR+P+++ F GVNGVGKSTNLAK+++WL+++ V++AACDTFR+G
Sbjct: 403 RRVDILRDVIEAQKQRRPFIITFCGVNGVGKSTNLAKISFWLMENGFRVLIAACDTFRAG 462
Query: 426 AVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
AVEQLRTHA RL V +FE+GY KD A +A EAI A + DVVLVD
Sbjct: 463 AVEQLRTHAHRLNSLHPPEKNNGQPMVQLFERGYGKDAAGIAMEAIAFARNHEFDVVLVD 522
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S PQ
Sbjct: 523 TAGRMQDNTPLMTALAKLIAINMPDLVLFVGEALVGNEAVDQLVKFNQALADHSMIEKPQ 582
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DL+ LN K+IV L+K
Sbjct: 583 LIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYNDLRSLNAKAIVSALIK 639
>gi|58264896|ref|XP_569604.1| signal recognition particle binding protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134109623|ref|XP_776926.1| hypothetical protein CNBC4160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259606|gb|EAL22279.1| hypothetical protein CNBC4160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225836|gb|AAW42297.1| signal recognition particle binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 674
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 246/710 (34%), Positives = 357/710 (50%), Gaps = 159/710 (22%)
Query: 1 MLEQLLIFTRGGLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ + I + GL+LW+ + L N SPI+ L++S +E G A N + G
Sbjct: 1 MLDHISISHQSGLVLWSRAFTPAFETLANT-PNSPINALVKSTFIE---GKAMTNGEEQG 56
Query: 55 A---AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLL--------AMMKQSFSEIYDPKR 103
Y+++W+ N LGLVFV V+ +L L YV LL A+ + + + +
Sbjct: 57 LEKDGYSVRWSVDNGLGLVFVVVFPALLPLTYVPALLERTKALFLALFQPYVTSLIESLS 116
Query: 104 TDYSDFDEMFRQLR-KEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGG 162
+ + +QL+ K E R +E+ + + KK L K +R S+R+
Sbjct: 117 SGGASAGSALKQLKEKIVEERWDEVWD--RCFRSCEGEKKSRSTLVK---QRVSDRTNPA 171
Query: 163 -SANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR 221
S+ D D D VG+ A E + N+ + K +
Sbjct: 172 ISSADTSDVD-------------VGSQS---------ALSAEEIAKNVQSL------KAK 203
Query: 222 NKGGKK-------TDTVVSKGSNPDPKKKITKKNRVWDDSPPESK----LDFTDPAGGNG 270
KGGK+ + + S P +K R W D+P ++ LD++ PA +
Sbjct: 204 MKGGKRRGVRDGLSPSPSPSPSRKPPSNATSKLMRRWGDTPVTAEDMAALDYSTPAPDSS 263
Query: 271 SN----IEVEAADHGESMMDKEEV---------------FSSDSESEEDEEVGKH----- 306
+N ++ E+ E++ + + S +S E+E + +
Sbjct: 264 ANDTAHVDKESLISSEALGTRNDTGAYQVADWDFRRAPASSHESLPSEEEIIARGTSRLS 323
Query: 307 -NKP--DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------- 352
N+P D ++SMF + G L + DLEP L ++ LM+KNVA
Sbjct: 324 LNRPTDDGSNQSSWTSMFSRLTGSKILTRNDLEPVLIEMEKHLMSKNVAKDIAEKLCNSV 383
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVHAAKEQR---------- 381
+ +L R+LTP+ S DIL ++ +
Sbjct: 384 GAALVGKKLGGLNSVKSEVQSVLSTSLTRVLTPKTSTDILLEIQRKRSSHLATLSTTSSP 443
Query: 382 -----KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
PY + FVGVNGVGKSTNL+KV +WLLQ+ + V++AACDTFRSGAVEQLR H R
Sbjct: 444 LDSGPDPYTLTFVGVNGVGKSTNLSKVCFWLLQNGLRVLIAACDTFRSGAVEQLRVHVRN 503
Query: 437 L-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
L ++ +FE+GY KD A +AK+AI A + DVVL+DTAGRMQDNEPL
Sbjct: 504 LGALGEEMGQGQGKRIELFERGYGKDAAGIAKDAIAYAKEHAFDVVLIDTAGRMQDNEPL 563
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS-----PNPQLIDGIL 538
MRAL+KL+ +NNPD ++FVGEALVGN+AVDQL+KF++ L D S + + IDGI+
Sbjct: 564 MRALAKLVTVNNPDKIVFVGEALVGNEAVDQLTKFDRALRDFSGAGVGGVARKRGIDGII 623
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
LTKFDTIDDKVGAALSM Y++G P++FVGCGQ+YTDL++L V IV+ LL
Sbjct: 624 LTKFDTIDDKVGAALSMTYITGQPILFVGCGQTYTDLRQLRVNHIVQALL 673
>gi|328865257|gb|EGG13643.1| signal recognition particle receptor alpha subunit [Dictyostelium
fasciculatum]
Length = 607
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/396 (48%), Positives = 244/396 (61%), Gaps = 64/396 (16%)
Query: 234 KGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGE----SMMDKEE 289
K + P +K K+ R WDD G + E+E+ + + +++KE
Sbjct: 234 KKKDSTPTQKKGKEARSWDD--------------GKATKREMESLNRSDRSSKQVIEKET 279
Query: 290 VFSS---DSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
F D + DEE D TG F FQ + G + K DLEP L+ L
Sbjct: 280 EFIKHDLDMDISSDEE-------DKPVTG-FMKYFQVLTGNRTIAKEDLEPVLQKFVGHL 331
Query: 347 MTKNVA--------------------------------AMEEALVRILTPRRSIDILRDV 374
+KNVA AMEE+L RILTP++ IDIL+D+
Sbjct: 332 TSKNVALDIAEKLVESIGSSLEGKKLSTFQGVTTVVKTAMEESLTRILTPKKHIDILKDI 391
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
K R PY +VF GVNGVGKSTNLAKV YWL + VM+AACDTFRSGA+EQL THA
Sbjct: 392 QLLKGSR-PYAIVFSGVNGVGKSTNLAKVCYWLKANGHRVMLAACDTFRSGAIEQLGTHA 450
Query: 435 RRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
RL V +FE+GY KD A +A +AI+ A + DVVL+DT GRMQ+NEPLMRALSKL+ N
Sbjct: 451 ARLDVELFERGYGKDAASIAGDAIEYARQTKHDVVLIDTTGRMQNNEPLMRALSKLVNQN 510
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLS--SSPNPQLIDGILLTKFDTIDDKVGAA 552
DLVLFVGEALVGND VDQL+KF++ L+ LS S N + IDGI+LTKFDTIDDKVGAA
Sbjct: 511 TIDLVLFVGEALVGNDGVDQLTKFDKSLSLLSDASKNNVRTIDGIILTKFDTIDDKVGAA 570
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+SMVY +G P++F+G GQ+YTDLK++NVK++VKTLL
Sbjct: 571 ISMVYSTGHPIIFLGTGQNYTDLKRMNVKTVVKTLL 606
>gi|66818279|ref|XP_642799.1| signal recognition particle receptor alpha subunit [Dictyostelium
discoideum AX4]
gi|74856964|sp|Q54ZR7.1|SRPR_DICDI RecName: Full=Signal recognition particle receptor subunit alpha;
Short=SR-alpha; Short=Signal recognition particle
receptor; AltName: Full=Docking protein alpha;
Short=DP-alpha
gi|60470903|gb|EAL68875.1| signal recognition particle receptor alpha subunit [Dictyostelium
discoideum AX4]
Length = 615
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/312 (55%), Positives = 214/312 (68%), Gaps = 35/312 (11%)
Query: 311 AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------ 352
AK F F + G +DK DLEP L K L KNVA
Sbjct: 304 AKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGK 363
Query: 353 --------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKST 398
ME+ + RILTP+R+IDILR+V A K +R PY +VF GVNGVGKST
Sbjct: 364 KLATFQGVTSVVKQQMEDTITRILTPKRNIDILREVQAVKGKR-PYSIVFSGVNGVGKST 422
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAI 458
NLAKV YWL + M+AACDTFRSGA+EQL+THA RL V +FE+GY KD A VA++AI
Sbjct: 423 NLAKVCYWLTANGYKCMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSKDAASVAQDAI 482
Query: 459 QEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKF 518
A G DVVL+DT GRMQ+NEPLM+ALSKL+ NN DLVLFVGEALVGND VDQL+KF
Sbjct: 483 AFAKDTGYDVVLIDTTGRMQNNEPLMKALSKLVNQNNVDLVLFVGEALVGNDGVDQLTKF 542
Query: 519 NQKLADLSSSPNPQL--IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
++ L+ L+++ + IDGI+LTKFDTIDDKVGAA+SMVY +G P++F+G GQ+YTDLK
Sbjct: 543 DKSLSLLANTTQTHIRTIDGIILTKFDTIDDKVGAAISMVYSTGHPILFLGTGQNYTDLK 602
Query: 577 KLNVKSIVKTLL 588
++N+KS+VK+LL
Sbjct: 603 RMNIKSVVKSLL 614
>gi|405123248|gb|AFR98013.1| signal recognition particle binding protein [Cryptococcus
neoformans var. grubii H99]
Length = 674
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 245/709 (34%), Positives = 351/709 (49%), Gaps = 157/709 (22%)
Query: 1 MLEQLLIFTRGGLILW------TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ + I + GL+LW T + L N SPI+ L++S +E G A N + G
Sbjct: 1 MLDHISISHQSGLVLWSRAFTPTFETLANT-PNSPINALVKSTFIE---GKAMANGEEQG 56
Query: 55 A---AYTLKWTFHNELGLVFVAVYQRILHLLYVDDL--------LAMMKQSFSEIYDPKR 103
Y+++W+ N LGLVFV V+ +L L YV L LA+ + + + +
Sbjct: 57 LEKDGYSVRWSVDNGLGLVFVVVFPALLPLTYVPALLERTKALFLALFQPYVTSLIESLS 116
Query: 104 TDYSDFDEMFRQLR-KEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGG 162
+ + +QL+ K E R +E+ + + KK L K G+N +
Sbjct: 117 SGGASAGSALKQLKEKIVEERWDEVWD--RCFRNCEGEKKSRSTLVKQRVSDGANPAI-- 172
Query: 163 SANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRN 222
S+ D D D VG+ A E + N+ + K +
Sbjct: 173 SSADTSDVD-------------VGSQP---------AVSAEEIAKNVQSL------KAKM 204
Query: 223 KGGKK-------TDTVVSKGSNPDPKKKITKKNRVWDDSPPES----KLDFTDPAGGNGS 271
KGGK+ + + S P +K R W DSP + LD++ PA + +
Sbjct: 205 KGGKRRGVRDGLSPSPSPSPSRKPPVNATSKLMRRWGDSPVTADDMAALDYSTPAPDSSA 264
Query: 272 N----IEVEAADHGESMMDKEE---------------VFSSDSESEEDEEVGKHNK---- 308
N ++ E+ E++ + E V S ++ E+E + +
Sbjct: 265 NDTVSVDKESLVSSEALGTRNETGAYQVADWDFRRAPVTSQENLPSEEEIIARGTSRLSL 324
Query: 309 ----PDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
D ++SMF + G L + DL P L ++ LM+KNVA
Sbjct: 325 NRATDDGSSQSSWTSMFSRLTGSKILTRNDLAPVLVEMEKHLMSKNVAKDIAEKLCDSVG 384
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAKEQR----------- 381
+ +L R+LTP+ S DIL ++ +
Sbjct: 385 AALVGKKLGGLSSVKSEVQSVLSTSLTRVLTPKTSTDILLEIQRKRSSHLATLSATSSSL 444
Query: 382 ----KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
PY + FVGVNGVGKSTNL+KV +WLLQ+ + V++AACDTFRSGAVEQLR H R L
Sbjct: 445 DSGPDPYTMTFVGVNGVGKSTNLSKVCFWLLQNGLRVLIAACDTFRSGAVEQLRVHVRNL 504
Query: 438 -------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
++ +FE+GY KD A +AK+AI A + DVVL+DTAGRMQDNEPLM
Sbjct: 505 GALGEEMGQGKGKRIELFERGYGKDAAGIAKDAITYAKEHAFDVVLIDTAGRMQDNEPLM 564
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS-----PNPQLIDGILL 539
RAL+KL+ +NNPD ++FVGEALVGN+AVDQL+KF++ L D S + + IDGI+L
Sbjct: 565 RALAKLVTVNNPDKIVFVGEALVGNEAVDQLTKFDRALRDFSGAGVGGVARKRGIDGIIL 624
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
TKFDTIDDKVGAALSM Y++G P++FVGCGQ+YTDL++L V IV+ LL
Sbjct: 625 TKFDTIDDKVGAALSMTYITGQPILFVGCGQTYTDLRQLRVNHIVQALL 673
>gi|340501931|gb|EGR28659.1| signal recognition particle receptor, putative [Ichthyophthirius
multifiliis]
Length = 586
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 163/331 (49%), Positives = 226/331 (68%), Gaps = 42/331 (12%)
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSM---FQSIAGKANLDKADLEPALKALKDRLMTK 349
+D S+EDE+ + KK G+F+S+ + + G LD DL+P L+ KD+LM++
Sbjct: 262 NDLSSDEDEQ-------NIKKRGFFASLSNSLKQLTGSKVLDAQDLQPVLEKFKDQLMSR 314
Query: 350 NVA--------------------------------AMEEALVRILTPRRSIDILRDVHAA 377
NVA +++EA+ +ILTP+ +IDI+ + +A
Sbjct: 315 NVAEQIAQQLCDSIKQNLLKTKSQAFTTLYKTVKESLQEAISKILTPKTNIDIISEALSA 374
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
+E+ KPY++ F+GVNGVGKSTNLAKVAY SVM+AACD FR+GAVEQ++TH R L
Sbjct: 375 REKGKPYIITFIGVNGVGKSTNLAKVAYLFKTQGFSVMLAACDNFRAGAVEQIKTHGRCL 434
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+P+++KGY ++PA +A +AI+EAT D++L+DTAGRMQDNEPLM+ LSKL+ +NNPD
Sbjct: 435 NIPVYDKGYREEPADIAFQAIREATMKKIDILLIDTAGRMQDNEPLMKQLSKLVVMNNPD 494
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L+LF+GEA+VGND DQL KFN+ L DLS N + IDGI+L+KFD ++DKVGAALSM Y
Sbjct: 495 LILFIGEAVVGNDGTDQLMKFNKALVDLSPKENIKEIDGIILSKFDIVEDKVGAALSMTY 554
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F G GQ Y LKKLNV+++V LL
Sbjct: 555 NTGKPIVFCGVGQKYPHLKKLNVRTVVHALL 585
>gi|358058867|dbj|GAA95265.1| hypothetical protein E5Q_01921 [Mixia osmundae IAM 14324]
Length = 985
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 230/663 (34%), Positives = 347/663 (52%), Gaps = 105/663 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----A 56
+++ IFT+GGL+LW+ + G++ +P+++L R L++ RS +S + D A
Sbjct: 8 LIDHASIFTKGGLVLWS-RSYGSS--RNPMNSLARDVLIQGRSH-SSLSADEAQTWECDN 63
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD------FD 110
++ +T NE L+ + R++ L Y+ L +K F ++ K + S+ +
Sbjct: 64 LSVGYTLANEYDLILAIAHPRVIQLSYLPAFLVALKALFISMFATKLSALSNALKVNAVE 123
Query: 111 EMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDS 170
+ +QL + A + L+ L +Q + G + + ++ G + DS
Sbjct: 124 ALAQQLGGISLASPDWLQGWDAA---FARLLQQFDKTSSRGMK--ATKTPGLAVASPEDS 178
Query: 171 DNMRGRKLE---NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKK 227
D+ + + +G + N+ ++R G+ GK+ S+ + G
Sbjct: 179 DSAPASEPDQPLDGKAISKNMAAFKTRQKGLRGGKQ----------ASRPSSRASLAGSG 228
Query: 228 TDTVVSKGSNPDPKKKITKKNRVWDDSPPE----SKLDFTDPAGGNGSNIEVEAADHGES 283
+DT G D K+K +K R W D P + LDF+ N +N E A G
Sbjct: 229 SDT----GPESDAKRKASKVMRKWGDGVPTEEDMTALDFSS----NDANGHEEIAPSG-- 278
Query: 284 MMDKEEVFSSDSESEED--EEVGKHNKPDAKKTGWFSSMFQSIA-----GKANLDKADLE 336
++D + D + + P TG S+F + G L +L+
Sbjct: 279 LVDSRAMGQVDRNGLYNVADYALPAAAPAEASTGGLGSLFSKLTASVGLGSRKLTAEELK 338
Query: 337 PALKALKDRLMTKNVA--------------------------------AMEEALVRILTP 364
P L +++ LM +NVA A+E ALVRILTP
Sbjct: 339 PVLSTMREHLMNRNVARDVAEKICESVGQSLQGTTLSGMASVKTEVRKALEVALVRILTP 398
Query: 365 RRSIDILRDVHAAKEQR-----KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
R S D+L ++ + PYV+ FVGVNGVGKSTNL+KVA+WLLQ+K+ VM+AAC
Sbjct: 399 RTSTDVLLEITRKRSTSIMSAPTPYVITFVGVNGVGKSTNLSKVAFWLLQNKLRVMIAAC 458
Query: 420 DTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQEATRNGS 466
DTFRSGAVEQLR H L + ++E+GY KD A +AK+AI A + G
Sbjct: 459 DTFRSGAVEQLRVHVNNLSKLSVQPRIDGRSSIELYERGYGKDAAGIAKDAIAYAKQEGF 518
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DV+L+DTAGRMQDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQL KFN L + S
Sbjct: 519 DVILIDTAGRMQDNEPLMRALAKLVMVNQPDKIVFVGEALVGNEAVDQLKKFNDSLRNFS 578
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+S +DGI+++KFDT+ +KVGA LSM Y +GAPV+FVG GQ+Y+DL+ L V+ IV+
Sbjct: 579 NSQRG--VDGIIVSKFDTVSEKVGAVLSMTYTTGAPVLFVGTGQTYSDLRSLRVQHIVQA 636
Query: 587 LLK 589
L++
Sbjct: 637 LVR 639
>gi|389584386|dbj|GAB67118.1| signal recognition particle receptor [Plasmodium cynomolgi strain
B]
Length = 587
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 343/617 (55%), Gaps = 61/617 (9%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ + IF++GGLILW T E+ + I T+++ L+EE+ Y+ A
Sbjct: 1 MIDVIRIFSKGGLILWSYTFYEIDDV----TIRTIVKQVLIEEKYEDFCKKYNKFHA--- 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD------FDEM 112
KW N++ +V + VYQ I + YV++L +K+SF ++ PK DY D FD+
Sbjct: 54 -KWKLLNDVDVVILIVYQGIQNSAYVENLFLKIKKSFVKLL-PKSLDYFDLDLPLNFDKQ 111
Query: 113 FRQLRKEAEA------RAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGG---S 163
F ++ ++ EA + + S + + ++ G +KGG + G S GG S
Sbjct: 112 FLKIVEDVEAILACTGGGADRRGSVDGRRGSIDGRRGGIDGRKGGID-GRKGSIGGRRTS 170
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGK--ENTSSNIGAFDVSKLQKLR 221
A+ SD R E + + + ++G E N +++K R
Sbjct: 171 ADARNSSDKARDDHTEASEDTGASERTDADSYSDNSDGNYDETKGKNKHGAHKVEVEKYR 230
Query: 222 NKGGKKTDTVVSKGSNPDPKKKITKKN-----RVWDDSPPESKLDFTDPAGGNGSNIEVE 276
+ + D + + DP K K R W+ S +K D +E
Sbjct: 231 KQRSDEDDKTLE---DDDPSVKRKSKTKKKSAREWELSKKITKRD-------------IE 274
Query: 277 AADHGESMMDKEEVFSSDSESEED--EEV--GKHNKPDAKKTGWFSSMFQSIAGKANLDK 332
D+ ++ + +VFS +S+ EE+ E V G NK +K S + ++ K K
Sbjct: 275 KLDYSKNEKNSTDVFSYNSKIEENDIESVLQGVKNKLLSKNVA--SEICDTLIEKM---K 329
Query: 333 ADLEPALKALKDRLMTKNVAA-MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 391
+L K L + K V+ + E + IL P+ S+D+LR AK K Y +VF+GV
Sbjct: 330 GNLIGKKKTLFAMNVKKTVSTVLSETIQSILIPKESVDVLRAALEAKSIGKLYSIVFLGV 389
Query: 392 NGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 450
NGVGKSTNLAKV Y+L + + +M+AACDTFR+GAVEQLRTHA L V ++EKGY KD
Sbjct: 390 NGVGKSTNLAKVCYYLKTKGNLKIMIAACDTFRAGAVEQLRTHANCLDVFLYEKGYGKDA 449
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A +AKEAI A + +V+L+DTAGRMQDNEPLMR+L KLI +NNPD +LFVGEALVGND
Sbjct: 450 AAIAKEAIAYAKKENFNVILIDTAGRMQDNEPLMRSLGKLILINNPDFILFVGEALVGND 509
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
A+DQL KFNQ L D + + N + IDGILLTKFDT+DDKVG ALSMVY++G P++FVG GQ
Sbjct: 510 AIDQLKKFNQALTDATCNANKRTIDGILLTKFDTVDDKVGTALSMVYLTGKPIVFVGIGQ 569
Query: 571 SYTDLKKLNVKSIVKTL 587
YT LKK NV +VK L
Sbjct: 570 KYTHLKKFNVNMVVKAL 586
>gi|358333532|dbj|GAA31593.2| signal recognition particle receptor subunit alpha [Clonorchis
sinensis]
Length = 543
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 258/449 (57%), Gaps = 83/449 (18%)
Query: 223 KGGKKTDTVVSKGSNP--DPKKKITKKNRVWDDSPP---ESKLDFTDPAGGNGSN----- 272
K KK S S+P P K K++R WD++ + LDF+ G G N
Sbjct: 96 KASKKPKESTSPTSSPLQKPNGKRIKESRRWDNAASGEEAAALDFSSSVGA-GENKGKAD 154
Query: 273 ---IEVEAAD----HGESMMDKEEVFSSDSESEE--------DEEVGKHNKPDAK----- 312
+ EAA G D +EV S E EE E + P++K
Sbjct: 155 YVLSKSEAATLSRLRGSMKNDLDEVHVSSDEGEEFVIEPAEIANETAESTAPNSKENGDV 214
Query: 313 ---KTGWFSSMFQSI---AGKAN-LDKADLEPALKALKDRLMTKNVA------------- 352
+ G SS+ + + G L + D+ P+L+ L+DRL+ KNVA
Sbjct: 215 KDNRGGLVSSLLKGLRLPGGNGRILTREDIAPSLEQLRDRLVAKNVAVEIAQRVCDSVAE 274
Query: 353 -------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNG 393
++EE R+L R +D+LRD A+ Q KPY +VF GVNG
Sbjct: 275 RLVGTPLGAFERIYTRVRTSLEEVCTRVLASGRRVDVLRDALDARSQGKPYTIVFCGVNG 334
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VP 440
VGKSTNLAK+A+WL++ V++AACDTFRSGAVEQLRTH +L V
Sbjct: 335 VGKSTNLAKIAFWLIEKNFRVLIAACDTFRSGAVEQLRTHVHKLNYIHPPEQHGGQKMVE 394
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++E+GY +D A +A+ AI A DVVLVDTAGRMQDNEPLMRAL+ LI++N PDLVL
Sbjct: 395 LYEQGYGRDAASIARSAINYARDRHLDVVLVDTAGRMQDNEPLMRALASLIHMNQPDLVL 454
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FVGEALVGN+AVDQL KFNQ LAD S + P+ IDGI+LTKFDTIDDKVGAA+SM Y+S
Sbjct: 455 FVGEALVGNEAVDQLVKFNQSLADHSMADKPRTIDGIVLTKFDTIDDKVGAAISMAYISS 514
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++FVG GQ+Y DL++L+V ++VK L+K
Sbjct: 515 QPIVFVGTGQTYADLRQLSVGAVVKALMK 543
>gi|449274875|gb|EMC83932.1| Signal recognition particle receptor subunit alpha, partial
[Columba livia]
Length = 606
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 234/628 (37%), Positives = 328/628 (52%), Gaps = 101/628 (16%)
Query: 40 EERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ER G SF ++ A LK+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 1 QERGGSNSFTHE----ALMLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKY 56
Query: 100 DPKRTDYS------------DFDEMFRQLRKEAEARAEE-----LKKSKQVTKPMNNLKK 142
R ++ DF + F +L +EAE ++ +K +Q K +K
Sbjct: 57 ---RNEFQQKGTLALLNGTFDFKDDFTRLLREAEESSKTRAPVAMKTFEQSLKSQKTIK- 112
Query: 143 QGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGK 202
++ G + + ++ + + G E ++ G + +
Sbjct: 113 --CMIETRGEKPKEKVKPKKNKGSKKEATEV---------AVPGKAPAGEKQLPGAGDRE 161
Query: 203 ENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LD 261
E + I + + K K G++ SK P+ +K+ KK RVWD +K LD
Sbjct: 162 ELSKDEILQKNREEFFKRHMKAGER----ASKSPKPEAQKEKGKKPRVWDLGNSNAKVLD 217
Query: 262 FTDPA-GGNGSNIEVEAADHGESMMDKEEV--------FSSDSESEEDEEVGKHNKPDAK 312
+++ A G+ VE D ++ D+ + SD E+EE++ V +K AK
Sbjct: 218 YSNSATNGSAEPGPVEEFDPDTALGDRNREPGRLYDLEYESDDETEEEKIVPNPSKTSAK 277
Query: 313 KTGWFSSMF--QSIAGKANLDKADLEPALKALKDRLMTKNVAA----------------- 353
K G + + G +L + D++P L+ +KD L+ KNVAA
Sbjct: 278 KGGLGGMFGMLKGLVGSKSLTREDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGK 337
Query: 354 ---------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKST 398
++EALV+IL P+R +D+LRDV A+ Q +PYVV F GVNGVGKST
Sbjct: 338 VMGTFTTVTSTVKQALQEALVQILQPQRRVDVLRDVLDAQRQHRPYVVTFCGVNGVGKST 397
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAV----EQLRTHARRLQ-------------VPI 441
NLAKV + L + +CD SG Q RTH RRL V +
Sbjct: 398 NLAKVGHGPLGERGDNSSPSCDISGSGGTILLPFQRRTHTRRLNALHPPESHGGRTMVQL 457
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+EKGY KD A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLF
Sbjct: 458 YEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLF 517
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
VGEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++
Sbjct: 518 VGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSK 577
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 578 PIVFVGTGQTYCDLRSLNAKAVVAALMK 605
>gi|330844238|ref|XP_003294039.1| hypothetical protein DICPUDRAFT_51281 [Dictyostelium purpureum]
gi|325075556|gb|EGC29428.1| hypothetical protein DICPUDRAFT_51281 [Dictyostelium purpureum]
Length = 572
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/395 (50%), Positives = 248/395 (62%), Gaps = 63/395 (15%)
Query: 234 KGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEV--- 290
K N K+ K+ R WDD G S E+E+ + ES K+ V
Sbjct: 200 KNKNTPDKQGNKKQARKWDD--------------GKLSKEELESLNKSESTPTKQIVKEK 245
Query: 291 ---FSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLM 347
F+ D E DEE +KP F F + G +DKADL P L K L
Sbjct: 246 IQKFNIDMEVSSDEE----DKP----ASGFMKYFNVLTGNRVIDKADLVPILDNFKTHLT 297
Query: 348 TKNVAA--------------------------------MEEALVRILTPRRSIDILRDVH 375
KNVAA MEE + RILTP+R+IDILR+V
Sbjct: 298 KKNVAADIADKLVESIGTGLEGKKLSTFQGVSGVVKQQMEETITRILTPKRNIDILREVQ 357
Query: 376 AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
A K +R PY +VF GVNGVGKSTNLAK+ YWL + M+AACDTFRSGA+EQL+THA
Sbjct: 358 AVKGKR-PYTIVFSGVNGVGKSTNLAKICYWLTANGYRCMLAACDTFRSGAIEQLKTHAD 416
Query: 436 RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
RL VP++E+GY KD A VA +AI EA G DVVL+DT GRMQ+NEPLM+ALSKL+ NN
Sbjct: 417 RLGVPLYERGYSKDAANVAADAIAEAKDMGIDVVLIDTTGRMQNNEPLMKALSKLVNQNN 476
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL--IDGILLTKFDTIDDKVGAAL 553
DLVLFVGEALVGND VDQL+KF++ L+ LSS+ + ++ IDGI+LTKFDTIDDKVGAA+
Sbjct: 477 ADLVLFVGEALVGNDGVDQLTKFDKSLSLLSSTTSSKIRTIDGIILTKFDTIDDKVGAAI 536
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
SMVY +G P++F+G GQ+YTDLK++N+KS+VK+LL
Sbjct: 537 SMVYSTGHPILFLGTGQNYTDLKRMNIKSVVKSLL 571
>gi|422295604|gb|EKU22903.1| signal recognition particle receptor subunit alpha [Nannochloropsis
gaditana CCMP526]
Length = 375
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/302 (55%), Positives = 212/302 (70%), Gaps = 32/302 (10%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F + G A L A+++P ++ ++ L+ KNVA
Sbjct: 74 LFARMTGNAVLSAAEVDPIMEEMRMLLIGKNVASEIAQDICESVRTSLVGQKLPSLTSVK 133
Query: 353 -----AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL 407
A+E A+VR+LTPR+S D+LR V AAK + +PY VVFVG+NGVGKST+L+KV Y+L
Sbjct: 134 TVVREALERAIVRVLTPRKSTDLLRQVMAAKAEGRPYSVVFVGINGVGKSTSLSKVCYYL 193
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
QH + V++AACDTFRSGAVEQL+ HAR L+V +++KGY KDPA VAK AI+EAT G D
Sbjct: 194 KQHGLRVLIAACDTFRSGAVEQLKVHARCLEVDLYDKGYHKDPAAVAKAAIKEATDKGHD 253
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVLVDTAGRMQ+ EPLMRAL+KL+ N PDLV+FVGEALVGND +DQL+ FNQ LA+ S
Sbjct: 254 VVLVDTAGRMQNKEPLMRALAKLVSDNQPDLVVFVGEALVGNDGIDQLTVFNQALANYSP 313
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
IDGI+LTKFDT+D+KVGAALSM Y +G P++FVG GQ YT LKKLNV I+ L
Sbjct: 314 PGKTHQIDGIILTKFDTVDEKVGAALSMCYKTGQPILFVGTGQKYTHLKKLNVNLILNCL 373
Query: 588 LK 589
+
Sbjct: 374 FR 375
>gi|167519717|ref|XP_001744198.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777284|gb|EDQ90901.1| predicted protein [Monosiga brevicollis MX1]
Length = 317
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 213/315 (67%), Gaps = 44/315 (13%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
S F S+ G L + L P + ++ L+ KNVA
Sbjct: 3 SFFSSLTGSTKLTREALAPVMAKMRLHLIEKNVAQNIAEKLCESVEEQLVGTEKSSFSSI 62
Query: 353 ------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
A+ +AL RILTP+R ++ILRDV A+ Q++PYV+ F GVNGVGKSTNL+K+A+W
Sbjct: 63 ATVVRQAISDALTRILTPKRQVNILRDVREAQRQQRPYVITFCGVNGVGKSTNLSKIAFW 122
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------------VPIFEKGYEKDPAIVA 454
LL + + V++AACDTFRSGAVEQL+TH +L+ V IF++GY KD A VA
Sbjct: 123 LLSNNMRVLIAACDTFRSGAVEQLKTHCTKLRNMLQQDDQQAPIVSIFDQGYGKDDAGVA 182
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
AI A G DVVLVDTAGRMQDNEPLMR+L+KLI N PDLVLFVGEALVGN+AVDQ
Sbjct: 183 ALAISLAKTEGYDVVLVDTAGRMQDNEPLMRSLTKLIKHNKPDLVLFVGEALVGNEAVDQ 242
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
L+KFN+ L D S S P+ +DGI+L+KFDT+DDKVG+A+SM Y++G P++FVG GQ Y D
Sbjct: 243 LTKFNKALQDFSESSQPRTLDGIVLSKFDTVDDKVGSAISMTYITGQPIVFVGTGQDYYD 302
Query: 575 LKKLNVKSIVKTLLK 589
LK LNV+S+V+ LLK
Sbjct: 303 LKTLNVESVVQALLK 317
>gi|452819240|gb|EME26304.1| fused signal recognition particle receptor [Galdieria sulphuraria]
Length = 626
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/304 (54%), Positives = 208/304 (68%), Gaps = 33/304 (10%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
S F+ + K L K DLEP L +D L+TKNVA
Sbjct: 323 SFFKGLTTKKELTKEDLEPVLNKFRDTLITKNVASDIAQRLCDSVGLTLQGNKLDTFGSV 382
Query: 353 ------AMEEALVRILTPRRSIDILRD-VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
A+E ++ R+LTPR+S D++ D V+ +E KP+V+VF GVNGVGKST LAKV Y
Sbjct: 383 SRIIRNALEISVARMLTPRQSDDLVADIVNKRRETGKPFVIVFCGVNGVGKSTTLAKVCY 442
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
+L + + VM+AACDTFR+GAVEQLR HAR L V +FEKGY KDP+ VA +AI A+
Sbjct: 443 YLQSNDLKVMIAACDTFRAGAVEQLRIHARCLNVELFEKGYAKDPSSVASDAIHYASEKN 502
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DV+LVDTAGRMQDNEPLM+AL+KL+ LN PD V FVGEALVGNDAVDQL KFN L D
Sbjct: 503 VDVLLVDTAGRMQDNEPLMKALAKLVNLNKPDRVFFVGEALVGNDAVDQLLKFNDALIDN 562
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
++ P+ IDGI+LTKFD+IDDKVGAA+SMVY + P++FVG GQ+Y DLKK+N+ VK
Sbjct: 563 QNTNKPREIDGIILTKFDSIDDKVGAAVSMVYSTNIPIVFVGVGQTYVDLKKMNISWFVK 622
Query: 586 TLLK 589
LL+
Sbjct: 623 ALLR 626
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNAL---KGSPIDTLIRSCLLEERSGLASFNYDSAGAAY 57
M++ +IFTRGG +L+ +AL +G PID LIRS LL +++GL +Y +
Sbjct: 1 MIDLFVIFTRGGFVLFY-----DALIHTEGRPIDRLIRSVLLVDKAGLGQLSY----GNF 51
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
T+KWT N+ GLVF V+ R L + Y + LL K SF + +
Sbjct: 52 TVKWTLSNQHGLVFAVVFPRRLPISYANVLLEQTKDSFCKRF 93
>gi|449547517|gb|EMD38485.1| hypothetical protein CERSUDRAFT_113658 [Ceriporiopsis subvermispora
B]
Length = 669
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 195/435 (44%), Positives = 260/435 (59%), Gaps = 81/435 (18%)
Query: 235 GSNPDPKKKITKKNRV---W-DDSPPES----------KLDFTDPAGGNGSNIEVEAADH 280
GS+ D + K K +V W D++P ES K+D P + + V+ +
Sbjct: 233 GSDTDTQSKRKAKAKVQRKWGDEAPSESDMASLDYSYEKVDSARPGTSHDVSALVDKSSL 292
Query: 281 G----ESMMD-KEEVFSSDSESEED--EEVGKHNKPDAKKT------GWFSSMFQSIAGK 327
G E + + K+ FSS S +D EV K AK T G S+F + G
Sbjct: 293 GVRNEEGLYEVKDWEFSSSGRSTDDVIAEVLKGAPQSAKPTSTSGSLGALGSIFARLTGS 352
Query: 328 ANLDKADLEPALKALKDRLMTKNVA--------------------------------AME 355
L + DL+P L+A+K LM KNVA A+
Sbjct: 353 KVLTEQDLKPVLEAMKQHLMKKNVAKEISEKVCEGVGESLVGKKVGGFQTTNAAVRLALS 412
Query: 356 EALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
A+ RILTP+ S D+L + + +QR PY +VFVGVNGVGKSTNL+KV +WL+
Sbjct: 413 NAITRILTPKTSTDLLLSIRTKLSSPLPSTQQRMPYSIVFVGVNGVGKSTNLSKVCFWLI 472
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAK 455
Q+ + V++AACDTFRSGAVEQLR H R L +V ++E+GY KD A +AK
Sbjct: 473 QNGLRVLIAACDTFRSGAVEQLRVHVRNLSMLGVNGATDSKSRVELYERGYGKDAAGIAK 532
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
EAI A NG DVVLVDTAGRMQDNEPLMRAL+KL+ N+PD ++FVGEALVGN+AVDQL
Sbjct: 533 EAISYAKDNGFDVVLVDTAGRMQDNEPLMRALAKLVATNSPDKIIFVGEALVGNEAVDQL 592
Query: 516 SKFNQKLADLSSSPN--PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
+KF++ L D S+S + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGCGQ+YT
Sbjct: 593 TKFDRALRDFSASSGGKERGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGCGQTYT 652
Query: 574 DLKKLNVKSIVKTLL 588
DL++L V ++V+ +L
Sbjct: 653 DLRQLRVSNVVQAIL 667
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 1 MLEQLLIFTRGGLILWT-----CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG++LW+ A SP+++LIR L+E R+ + D
Sbjct: 1 MLDHCSISHKGGIVLWSRSFTPAASQSAASAASPVNSLIREALIEGRTAEDKYEKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
Y +KW+F N+L L+FV YQRIL L YVD+LLA +K F ++++P
Sbjct: 57 GYAVKWSFVNDLELIFVVAYQRILQLTYVDELLAALKTLFVKLFEP 102
>gi|409082461|gb|EKM82819.1| hypothetical protein AGABI1DRAFT_89509 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 928
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/440 (43%), Positives = 262/440 (59%), Gaps = 81/440 (18%)
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK----LDFT--DPAGGNGSNIEVEA 277
GG+++ + S+ P +K TK R W DS P + LD++ P G+G
Sbjct: 493 GGRESQSN-SESEAPTKRKNKTKVGRTWGDSHPTEQDMEALDYSADRPIDGSG-----RV 546
Query: 278 ADHGESMMDKEEVFSSDSE---SEEDEEVGK-HN---------KPDAKKT-GWFSSMFQS 323
+ ++++D+ + S + + +D E K HN KPD + G F S+
Sbjct: 547 TEDVQTLVDQSSLGSRNRDGLYEVKDWEFSKDHNDVLAKVIESKPDPSSSLGTFGSLIAR 606
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVA------------------------------- 352
+ G L +ADL+P L ++ LM KNVA
Sbjct: 607 LTGSKVLTQADLKPILDGMEQHLMKKNVAKEIAEKICESVGENLVGRKVGGFETTNAAVR 666
Query: 353 -AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
A+ ++ RILTP+ S D+L + + +QR PY + FVGVNGVGKSTNL+KV
Sbjct: 667 KALSTSITRILTPKTSTDLLLSIRTKLSSPLPSTQQRMPYSITFVGVNGVGKSTNLSKVC 726
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPA 451
+WL+Q+ + V++AACDTFRSGAVEQLR H R L +V ++EKGY KD A
Sbjct: 727 FWLIQNGLRVLIAACDTFRSGAVEQLRVHVRNLSMLGVNGAGDSKGRVELYEKGYGKDAA 786
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+AKEAI A N DVVL+DTAGRMQDNEPLMRAL+KL+ NNPD ++FVGEALVGN+A
Sbjct: 787 AIAKEAITYARDNDFDVVLIDTAGRMQDNEPLMRALAKLVATNNPDKIIFVGEALVGNEA 846
Query: 512 VDQLSKFNQKLADLSSSPNP---QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
VDQL+KF++ L D SS+ + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGC
Sbjct: 847 VDQLTKFDRALRDFSSASGVGKGRGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGC 906
Query: 569 GQSYTDLKKLNVKSIVKTLL 588
GQ+YTDL++L V ++V+ +L
Sbjct: 907 GQTYTDLRQLKVANVVQAIL 926
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 12 GLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHN 65
GL+LW+ +L ++ SP+++LIR L+E R+ + D Y +KWTF N
Sbjct: 281 GLVLWSRSFTPAAAQLASS-PVSPVNSLIRDALIEGRTTDEKYEKD----GYAVKWTFVN 335
Query: 66 ELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
+L L+FV YQRIL L YVD+LL +K F + Y+P
Sbjct: 336 DLELIFVVAYQRILQLTYVDELLLALKTLFVKYYEP 371
>gi|401405495|ref|XP_003882197.1| putative signal recognition particle protein [Neospora caninum
Liverpool]
gi|325116612|emb|CBZ52165.1| putative signal recognition particle protein [Neospora caninum
Liverpool]
Length = 520
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/370 (49%), Positives = 255/370 (68%), Gaps = 33/370 (8%)
Query: 239 DPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESE 298
D +++TKKN LDF+ A NG +V+ D +MM++ + + +
Sbjct: 163 DSNQRVTKKNM--------DTLDFSKKAASNG---DVQNGDTSMAMMERAIYGADEELED 211
Query: 299 EDEEVG--KHNKPDAKKTGWF---SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA- 352
++E ++ +A +GWF +S Q+ GK N+ + ++ L +++ RL A
Sbjct: 212 SEDEDALLENEVNEAATSGWFGRIASKLQTFTGK-NVAEEVIDLLLHSVQSRLKGTRTAS 270
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
A +A+V+ILTP++++D+LR AK + + + +VF+GVNGVGKSTNLAK
Sbjct: 271 FTTVHQTVRMATRDAIVKILTPKKTVDVLRLALEAKAEGRVFSIVFLGVNGVGKSTNLAK 330
Query: 403 VAYWLLQHK--VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQE 460
VAY+L +HK + V++AACDTFR+GAVEQLRTH+R LQVP+FE+GY KD A +A+EA+
Sbjct: 331 VAYYL-KHKGNLDVLIAACDTFRAGAVEQLRTHSRCLQVPLFERGYGKDAAAIAREALAT 389
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A + G DVVL+DTAGRMQDNEPLMR+L+KL+ +NNPD++LFVGEALVGNDAVDQL KFNQ
Sbjct: 390 ARQEGRDVVLIDTAGRMQDNEPLMRSLAKLVAINNPDMILFVGEALVGNDAVDQLKKFNQ 449
Query: 521 KLADLSS--SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
L DL++ P+ +DGI+LTKFDT+DDKVGAALSMVY++G PV+FVG GQ Y +LKKL
Sbjct: 450 ALVDLTALGGRPPRTVDGIILTKFDTVDDKVGAALSMVYITGQPVVFVGTGQKYPNLKKL 509
Query: 579 NVKSIVKTLL 588
N +VK LL
Sbjct: 510 NPTMVVKALL 519
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 32/141 (22%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTL 59
M++ + FTRGG++LW+ C ++GSP D LI++ LLE
Sbjct: 1 MIDAICAFTRGGVVLWSFCFA---KVQGSPFDHLIKNVLLE------------------- 38
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-DY------SDFDEM 112
W F N L +VFV +Y+ + + ++D LL +F + + ++ D+ + FDE
Sbjct: 39 -WKFLNNLEIVFVVIYRGMAQIAFLDALLDQTALAFVKHMEGRKALDFVASPPSTPFDET 97
Query: 113 FRQLRKEAEARAEELKKSKQV 133
F QL + E +K+ QV
Sbjct: 98 FVQLFTSLYQQQRE-RKTNQV 117
>gi|412990347|emb|CCO19665.1| predicted protein [Bathycoccus prasinos]
Length = 500
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/321 (48%), Positives = 220/321 (68%), Gaps = 41/321 (12%)
Query: 304 GKHNKPDAKKTGWFSSMFQ-----SIAGKANLDKADLEPALKALKDRLMTKNVA------ 352
GK N P W + + Q + GK L ++D +P ++ K +L+ KNVA
Sbjct: 182 GKDNSPSI----WVTEILQGKLAKKLIGKVKLSESDFKPVIEEFKLKLVNKNVAETIAEN 237
Query: 353 --------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVV 386
+ + LV+IL+P R +D+LR++ ++ +++ Y++
Sbjct: 238 ICKSASIQLLNNTITSLSQVSKILDQVVVDNLVQILSPLRQVDVLREIQESRFKKQVYII 297
Query: 387 VFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 446
+FVGVNGVGKST+L+KVAYW+ ++++S M+AACDTFR+GAVEQLRTH +RL +P++E+GY
Sbjct: 298 LFVGVNGVGKSTSLSKVAYWIQKNELSPMVAACDTFRAGAVEQLRTHCQRLGIPLYERGY 357
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
EKDPA+VA EA++ A R DV+L+DTAGRMQDNEPLMRALSKLI LN P+L LFVGEAL
Sbjct: 358 EKDPAVVAYEAVKHANRLKMDVLLIDTAGRMQDNEPLMRALSKLINLNKPNLTLFVGEAL 417
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VGN+A +QL FNQ+L DL +DGI+L+KFDT+ DK+GAA+SMVY + P++F+
Sbjct: 418 VGNEASEQLKTFNQRLLDLIDERKHTAVDGIILSKFDTVGDKIGAAISMVYSNNIPIIFL 477
Query: 567 GCGQSYTDLKKLNVKSIVKTL 587
GCGQ+YTDL++ +V++ K L
Sbjct: 478 GCGQTYTDLRRFDVETFAKVL 498
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 1 MLEQLLIFTRGGLIL--WTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
++E I RGG IL WT E + K + I+ LL ++SG +Y ++ +
Sbjct: 2 VIETFFILHRGGEILFRWTTNEESD--KQFSFNVFIKDRLLRKKSGDQLSSYAPVSSSLS 59
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY----DPKRTDYSDFDEMFR 114
W ++EL LVF+ Q+ L + Y+ D L ++ + ++ T S FD +F
Sbjct: 60 FSWITYDELELVFLVSNQKSLTVPYLHDFLVQVRCACVDVLLENSQSTSTFASVFDGIFE 119
Query: 115 QLR 117
++R
Sbjct: 120 KIR 122
>gi|426200295|gb|EKV50219.1| hypothetical protein AGABI2DRAFT_199741 [Agaricus bisporus var.
bisporus H97]
Length = 928
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/440 (43%), Positives = 262/440 (59%), Gaps = 81/440 (18%)
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK----LDFT--DPAGGNGSNIEVEA 277
GG+++ + S+ P +K TK R W DS P + LD++ P G+G
Sbjct: 493 GGRESQSN-SESEAPTKRKNKTKVGRTWGDSHPTEQDMEALDYSADRPIDGSG-----RV 546
Query: 278 ADHGESMMDKEEVFSSDSE---SEEDEEVGK-HN---------KPDAKKT-GWFSSMFQS 323
+ ++++D+ + S + + +D E K HN KPD + G F S+
Sbjct: 547 TEDVQTLVDQSSLGSRNRDGLYEVKDWEFSKDHNDVLAKVIESKPDPSSSLGTFGSLIAR 606
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVA------------------------------- 352
+ G L +ADL+P L ++ LM KNVA
Sbjct: 607 LTGSKVLTEADLKPILDGMEQHLMKKNVAKEIAEKICESVGENLVGRKVGGFETTNAAVR 666
Query: 353 -AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
A+ ++ RILTP+ S D+L + + +QR PY + FVGVNGVGKSTNL+KV
Sbjct: 667 KALSTSITRILTPKTSTDLLLSIRTKLSSPLPSTQQRMPYSITFVGVNGVGKSTNLSKVC 726
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPA 451
+WL+Q+ + V++AACDTFRSGAVEQLR H R L +V ++EKGY KD A
Sbjct: 727 FWLIQNGLRVLIAACDTFRSGAVEQLRVHVRNLSMLGVNGAGDSKGRVELYEKGYGKDAA 786
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+AKEAI A N DVVL+DTAGRMQDNEPLMRAL+KL+ NNPD ++FVGEALVGN+A
Sbjct: 787 AIAKEAITYARDNDFDVVLIDTAGRMQDNEPLMRALAKLVATNNPDKIIFVGEALVGNEA 846
Query: 512 VDQLSKFNQKLADLSSSPNP---QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
VDQL+KF++ L D SS+ + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGC
Sbjct: 847 VDQLTKFDRALRDFSSASGVGKGRGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGC 906
Query: 569 GQSYTDLKKLNVKSIVKTLL 588
GQ+YTDL++L V ++V+ +L
Sbjct: 907 GQTYTDLRQLKVANVVQAIL 926
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 12 GLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHN 65
GL+LW+ +L ++ SP+++LIR L+E R+ + D Y +KWTF N
Sbjct: 281 GLVLWSRSFTPAAAQLASS-PVSPVNSLIRDALIEGRTTDEKYEKD----GYAVKWTFVN 335
Query: 66 ELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
+L L+FV YQRIL L YVD+LL +K F + Y+P
Sbjct: 336 DLELIFVVAYQRILQLTYVDELLLALKTLFVKYYEP 371
>gi|157877214|ref|XP_001686937.1| putative signal recognition particle receptor like protein
[Leishmania major strain Friedlin]
gi|68130012|emb|CAJ09320.1| putative signal recognition particle receptor like protein
[Leishmania major strain Friedlin]
Length = 605
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 237/647 (36%), Positives = 333/647 (51%), Gaps = 100/647 (15%)
Query: 1 MLEQLLIFTRGGLILWTC--KELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + G++LW C E G + ++ LI+ LLE+R+GLA ++ D Y
Sbjct: 1 MIDTLSIVSDSGVVLWQCTTHETGRRVM---VNKLIQEVLLEDRAGLAQYSVDD----YQ 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
L+W N+ VAVY + Y+ L + +F++ Y K+T DF F ++
Sbjct: 54 LRWALENDARFFVVAVYPKFFKPHYMHVFLRDIATTFAKKYG-KQTAQQDF---FSSIQG 109
Query: 119 EA-EARAEELKK-SKQVTKPMNNLKKQGGQLQKGGFER---------GSNRSGG-----G 162
+ + AE L + S + + + G E GS+ + G G
Sbjct: 110 SSNQVPAENLMEFSAEYAALLAKFNTSEEAASRHGVESEDRDEAACSGSSGAAGEASDSG 169
Query: 163 SANDDG-DSDNMRGRKLENGHSNVGNVEIEES--RVT-GVANGKENTSSNIGAFDVSKLQ 218
SA DG D D R + N G V + + R+T G GK N S GA V+
Sbjct: 170 SAQGDGADDDFYRDNPQQPAAQNAGKVIVTKDGRRLTIGGGPGKGNAS---GASKVAPSS 226
Query: 219 KLRNKGGKKTDTVVSKGSNPDP--KKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVE 276
K GKK + + DP +K++ +K + ++ +
Sbjct: 227 GAAKKRGKKPTRCDNPWAAHDPMVEKQLHQKK-------------------ATEAELQAQ 267
Query: 277 AADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLE 336
A+ H E+ + + E + E + G ++ +S G +D DL+
Sbjct: 268 ASIHRETYIKRLPNGGIAPVKEREWE--------GQSRGCLATWLRSYVGTREVDAEDLK 319
Query: 337 PALKALKDRLMTKNVA--------------------------------AMEEALVRILTP 364
+ L+++L+ KNVA AM +L RIL P
Sbjct: 320 KIIPDLREKLIVKNVAVEVAEHVCKSVEASLAGKRLGTFDSLYKTVEDAMMASLRRILQP 379
Query: 365 RRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRS 424
+ +++LR+V AAK KPY +V GVNGVGKST+LAK+AYWL Q+ SV++AA DTFR
Sbjct: 380 KCEVNLLRNVAAAKAAGKPYSIVLCGVNGVGKSTSLAKIAYWLQQNGNSVLLAAGDTFRH 439
Query: 425 GAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
GAVEQL H R L VPIF+ GY DP+ VA A+ +A++ DVV+VDTAGRMQD+E M
Sbjct: 440 GAVEQLGVHGRCLGVPIFQLGYGTDPSTVAAAAMAQASKQHIDVVMVDTAGRMQDHESRM 499
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL--IDGILLTKF 542
RAL+KLI+ N PDLVLFVGEALVGN+ +DQL KFNQ L D + QL IDGI+LTKF
Sbjct: 500 RALAKLIHDNQPDLVLFVGEALVGNNGIDQLRKFNQCLVDFAPV-GSQLRGIDGIVLTKF 558
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DTIDDKVGAALSMVY G P++FVG GQ+Y DLK + + +V L+K
Sbjct: 559 DTIDDKVGAALSMVYELGQPIVFVGVGQTYQDLKVIEPEVVVSALMK 605
>gi|298708560|emb|CBJ30645.1| SRP101, alpha subunit of the signal recognition particle receptor
[Ectocarpus siliculosus]
Length = 589
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/319 (50%), Positives = 214/319 (67%), Gaps = 40/319 (12%)
Query: 310 DAKKTGWFSSMFQS--------IAGKANLDKADLEPALKALKDRLMTKNVA--------- 352
D K W ++ ++ + G L++ DLEP + ++++LM +NVA
Sbjct: 270 DENKGSWAGTLLKTSLGGFLHGLTGTKVLEERDLEPVMTKMREQLMGRNVASEVANDITA 329
Query: 353 -----------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFV 389
A++EA+ R+LTP++S D+LR+V AA+ + K Y + FV
Sbjct: 330 SVQATLIDQKLKSFTRVKTAVQSALKEAVSRVLTPKKSTDVLREVKAARSRGKVYSMAFV 389
Query: 390 GVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKD 449
G+NGVGKST+LAKVAY+L ++ + V++AACDTFRSGAVEQLR H R L VP+FEKGY +D
Sbjct: 390 GINGVGKSTSLAKVAYYLKENGIKVLIAACDTFRSGAVEQLRVHCRCLDVPLFEKGYARD 449
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
+ VA+EA++ A G D VL+DTAGRMQ+NEPLMRALSKLI N P+LVLFVGEALVGN
Sbjct: 450 SSAVAREAVKHAAEEGYDCVLIDTAGRMQNNEPLMRALSKLINENEPELVLFVGEALVGN 509
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
D V+QL FNQ LA+ S + IDG++LTKFDTID KVGAALSM Y +G P++FVG G
Sbjct: 510 DGVNQLQMFNQALANNSPAGRYHQIDGVVLTKFDTIDTKVGAALSMCYKTGQPILFVGTG 569
Query: 570 QSYTDLKKLNVKSIVKTLL 588
Q YT L+KLNV ++K L
Sbjct: 570 QKYTHLRKLNVNYVIKALF 588
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS-----DFDEMFR 114
+W+ NELGLV VA+YQ+ L L YV+ L+ +++ Y P + + +DE F
Sbjct: 17 RWSLANELGLVVVALYQKSLQLQYVEGLVDNIRRDIVRRYGPSLKNAAAAEPVAYDEHFD 76
Query: 115 QLRKEAE-ARAEELKKSKQVTKP 136
++ KEAE A E +++ KP
Sbjct: 77 RILKEAERGSAAEGRRASSSPKP 99
>gi|392567335|gb|EIW60510.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 668
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 220/339 (64%), Gaps = 54/339 (15%)
Query: 304 GKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------- 352
G+ KP + G S+F + G L + DL+P L+A+K LM KNVA
Sbjct: 328 GQEQKPASGSLGALGSIFARLTGSKVLSEEDLKPVLEAMKQHLMKKNVAKEISDKICEDV 387
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPY 384
A+ ++ RILTP+ S D+L + A +QR+PY
Sbjct: 388 GQSLVGKKVGGFQTTSSAVRQALGNSITRILTPKTSTDLLLSIRTKLSSPLPASQQRQPY 447
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------- 437
+ FVGVNGVGKSTNL+KV +WL+Q+ V++AACDTFRSGAVEQLR H R L
Sbjct: 448 SITFVGVNGVGKSTNLSKVCFWLIQNGFRVLIAACDTFRSGAVEQLRVHVRNLSMLGVDG 507
Query: 438 ------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
+V ++E+GY KD A +AKEAI A N DVVL+DTAGRMQDNEPLMRAL+KL+
Sbjct: 508 ATNSKGRVELYERGYGKDAAGIAKEAISYARDNEFDVVLIDTAGRMQDNEPLMRALAKLV 567
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL--IDGILLTKFDTIDDKV 549
NNPD +LFVGEALVGN+AVDQL+KF++ L D S++ Q IDG+++TK+DT+DDKV
Sbjct: 568 ATNNPDKILFVGEALVGNEAVDQLTKFDRALRDFSAASGVQERGIDGMVVTKWDTVDDKV 627
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GAALSM YV+G P++FVGCGQ+YTDL++L V ++V+ +L
Sbjct: 628 GAALSMTYVTGQPIIFVGCGQTYTDLRQLRVANVVQAIL 666
>gi|170094140|ref|XP_001878291.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646745|gb|EDR10990.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 664
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/426 (44%), Positives = 247/426 (57%), Gaps = 77/426 (18%)
Query: 241 KKKITKKNRVWDDSPPE----SKLDF--------TDPAGGNGSNIEVEAADHGESMMD-- 286
K K K R W D+ P + LDF T G + V+ A G D
Sbjct: 238 KSKKAKTQRKWGDTAPTESDMASLDFSIDKPDAATSDLGSHDLQSLVDQASLGTRTRDGL 297
Query: 287 ---KEEVFSSDSESEEDEEVGKHNKP-------DAKKTGWFSSMFQSIAGKANLDKADLE 336
K+ FS + D + KP A G S+F + G L +ADL+
Sbjct: 298 YEVKDWEFSQGKDKRTDNLLAGALKPLDRNASSSASSLGPLGSLFARLTGSKVLTEADLK 357
Query: 337 PALKALKDRLMTKNVA--------------------------------AMEEALVRILTP 364
P L+ +K LM KNVA A+ +L RILTP
Sbjct: 358 PVLEGMKQHLMKKNVAMEIADKVCENVGENLVGRKVGGFQTTSAAVHLALSTSLTRILTP 417
Query: 365 RRSIDILRDVH-------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
+ S D+L + + ++R PY + FVGVNGVGKSTNL+KV +WL+Q+ + V++A
Sbjct: 418 KTSTDLLLSIRNKLSSPLPSTQRRVPYSITFVGVNGVGKSTNLSKVCFWLIQNGLRVLIA 477
Query: 418 ACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRN 464
ACDTFRSGAVEQLR H R L +V +FE+GY KD A +A+EAI A N
Sbjct: 478 ACDTFRSGAVEQLRVHVRNLSMLGVDGATNSKSRVELFERGYGKDAAGIAREAIGYAQEN 537
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DVVL+DTAGRMQDNEPLMRAL+KL+ +NNPD ++FVGEALVGN+AVDQL+KF++ L D
Sbjct: 538 DFDVVLIDTAGRMQDNEPLMRALAKLVAVNNPDKIIFVGEALVGNEAVDQLTKFDRALRD 597
Query: 525 LSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
SS S + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGCGQ+YTDL++L V ++
Sbjct: 598 FSSVSGRSRGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGCGQTYTDLRQLRVANV 657
Query: 584 VKTLLK 589
V+ +LK
Sbjct: 658 VEAILK 663
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 11/107 (10%)
Query: 1 MLEQLLIFTRGGLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ I +GG++LW+ +L + SP+++LIR L+E R+ + D
Sbjct: 1 MLDHCSISHKGGIVLWSRSFTPEAAQLATS-TASPVNSLIREALIEGRTADEKYEKD--- 56
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
Y +KWTF N+L L+FV YQRIL L YVDDLL +K F + ++P
Sbjct: 57 -GYAVKWTFVNDLELIFVVAYQRILQLTYVDDLLTALKALFVKCFEP 102
>gi|221481269|gb|EEE19666.1| signal recognition particle protein, putative [Toxoplasma gondii
GT1]
Length = 588
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 221/317 (69%), Gaps = 40/317 (12%)
Query: 311 AKKTGWFSSM---FQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------- 352
A +GWF S+ QS G L AD+ L A + L KNVA
Sbjct: 248 AAASGWFRSLTSKLQSFTGNKLLTNADIAEVLPAFRAHLAEKNVAEEVIDLLLHSVQSRL 307
Query: 353 -----------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
AM +A+V+ILTP++++D+LR AK + + + +VF+GVNGVG
Sbjct: 308 KGTRTASFTSVHQTVRMAMRDAIVKILTPKKTVDVLRLALEAKAEGRVFSIVFLGVNGVG 367
Query: 396 KSTNLAKVAYWLLQHK--VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIV 453
KSTNLAKVAY+L +HK + V++AACDTFR+GAVEQLRTH+R LQVP+FE+GY KD A +
Sbjct: 368 KSTNLAKVAYYL-KHKGNLDVLIAACDTFRAGAVEQLRTHSRCLQVPLFERGYGKDAAAI 426
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVD 513
A+EA+ A + G DVVL+DTAGRMQDNEPLMR+L+KL+ +N+PD++LFVGEALVGNDAVD
Sbjct: 427 AREALATARQEGRDVVLIDTAGRMQDNEPLMRSLAKLVAMNSPDMILFVGEALVGNDAVD 486
Query: 514 QLSKFNQKLADLSS--SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
QL KFNQ L DL++ P+ +DGI+LTKFDT+DDKVGAALSMVY++G PV+FVG GQ
Sbjct: 487 QLKKFNQALVDLTALGGRPPRTVDGIILTKFDTVDDKVGAALSMVYITGQPVVFVGTGQK 546
Query: 572 YTDLKKLNVKSIVKTLL 588
Y +LKKLNV S LL
Sbjct: 547 YPNLKKLNVSSTFHVLL 563
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTL 59
M++ + F+RGG++LW+ C + SP D LI++ LLEERSG S + + YTL
Sbjct: 1 MIDAICAFSRGGVVLWSFCFA---KVPSSPFDHLIKNVLLEERSGSCS----ATLSPYTL 53
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-DY------SDFDEM 112
+W F N L +VFV +Y+ I L ++D LL +F + D K D+ + FDE+
Sbjct: 54 QWKFLNNLEIVFVVIYRGIAQLAFLDALLDHTALAFVKHMDGKNALDFVASPPSTSFDEV 113
Query: 113 FRQL 116
F +L
Sbjct: 114 FVKL 117
>gi|237844315|ref|XP_002371455.1| signal recognition particle protein, putative [Toxoplasma gondii
ME49]
gi|211969119|gb|EEB04315.1| signal recognition particle protein, putative [Toxoplasma gondii
ME49]
Length = 564
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 222/317 (70%), Gaps = 40/317 (12%)
Query: 311 AKKTGWFSSM---FQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------- 352
A +GWF S+ QS G L AD+ L A + L KNVA
Sbjct: 248 AAASGWFRSLTSKLQSFTGNKLLTNADIAEVLPAFRAHLAEKNVAEEVIDLLLHSVQSRL 307
Query: 353 -----------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
AM +A+V+ILTP++++D+LR AK + + + +VF+GVNGVG
Sbjct: 308 KGTRTASFTSVHQTVRMAMRDAIVKILTPKKTVDVLRLALEAKAEGRVFSIVFLGVNGVG 367
Query: 396 KSTNLAKVAYWLLQHK--VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIV 453
KSTNLAKVAY+L +HK + V++AACDTFR+GAVEQLRTH+R LQVP+FE+GY KD A +
Sbjct: 368 KSTNLAKVAYYL-KHKGNLDVLIAACDTFRAGAVEQLRTHSRCLQVPLFERGYGKDAAAI 426
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVD 513
A+EA+ A + G DVVL+DTAGRMQDNEPLMR+L+KL+ +N+PD++LFVGEALVGNDAVD
Sbjct: 427 AREALATARQEGRDVVLIDTAGRMQDNEPLMRSLAKLVAMNSPDMILFVGEALVGNDAVD 486
Query: 514 QLSKFNQKLADLSS--SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
QL KFNQ L DL++ P+ +DGI+LTKFDT+DDKVGAALSMVY++G PV+FVG GQ
Sbjct: 487 QLKKFNQALVDLTALGGRPPRTVDGIILTKFDTVDDKVGAALSMVYITGQPVVFVGTGQK 546
Query: 572 YTDLKKLNVKSIVKTLL 588
Y +LKKLN +VK LL
Sbjct: 547 YPNLKKLNPTMVVKALL 563
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 15/124 (12%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTL 59
M++ + F+RGG++LW+ C + SP D LI++ LLEERSG S + + YTL
Sbjct: 1 MIDAICAFSRGGVVLWSFCFA---KVPSSPFDHLIKNVLLEERSGSCS----ATLSPYTL 53
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-DY------SDFDEM 112
+W F N L +VFV +Y+ I L ++D LL +F + D K D+ + FDE+
Sbjct: 54 QWKFLNNLEIVFVVIYRGIAQLAFLDALLDHTALAFVKHMDGKNALDFVASPPSTSFDEV 113
Query: 113 FRQL 116
F +L
Sbjct: 114 FVKL 117
>gi|431904386|gb|ELK09771.1| Signal recognition particle receptor subunit alpha [Pteropus
alecto]
Length = 644
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 227/631 (35%), Positives = 317/631 (50%), Gaps = 103/631 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 74 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 128
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS---------DFDE 111
+ N+ LVFV +Q+IL L YVD L+ + + F + Y + S DF
Sbjct: 129 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 188
Query: 112 MFRQLRKEAEARAE--------ELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
F +L +EAE ++ + + S++ KP+ ++ + G+ + + + + G
Sbjct: 189 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGE-KPKEKAKNNKKKGAKK 247
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
DG + E + VE+ + + K ++ K
Sbjct: 248 EGFDGPLATSKAVPAEKSVAPENGVELSKEELI-----------------RRKREEFIQK 290
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIE------- 274
GK D + PK+K K RVW +K LD++ P +
Sbjct: 291 HGKGMDKSSKSTKSDAPKEKGKKAPRVWALGGCANKEDLDYSPPTTNGAPEVAPPEDINL 350
Query: 275 VEAADHGESMMDKEEVFSSDSESEEDE-EVGKHNKPDAKK--TGWFSSMFQSIAGKANLD 331
+ G + D D S +DE V KP A K G M + + G +L
Sbjct: 351 IRGTGPGGQLQDL------DCSSSDDEGAVQNSTKPSATKGTLGGMFGMLKGLVGSKSLS 404
Query: 332 KADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 391
+ D+E L ++D L+ KNVAA ++ + V E
Sbjct: 405 REDMESVLDKMRDHLIAKNVAA-----------DIAVQLCESVANKLE------------ 441
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------------- 438
KV ++ SV++AACDTFR+GAVEQLRTH RRL
Sbjct: 442 ---------GKVMGTFSKNGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTM 492
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
V +FEKGY KD A +A EAI A G DVVLVDTAGRMQDN PLM AL+KLI +N PDL
Sbjct: 493 VQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDL 552
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
VLFVGEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y+
Sbjct: 553 VLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYI 612
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 613 TSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 643
>gi|340375698|ref|XP_003386371.1| PREDICTED: signal recognition particle receptor subunit alpha-like
[Amphimedon queenslandica]
Length = 639
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 187/410 (45%), Positives = 251/410 (61%), Gaps = 55/410 (13%)
Query: 234 KGSNPDPKKKITKKNRVWDDSPPESKLDFTD--PAGGNGSNIEVEA-ADHGESMMDKEEV 290
K SN PK K ++ V LD++ P NG N + E SM+ + +
Sbjct: 231 KPSNGKPKTKEARQWMVGGSKGDTKALDYSGGAPPTTNGVNHDEEKDLSLKGSMIGQLQP 290
Query: 291 FSSDSESE----EDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
D+ E ++ ++ N+ + G FS +F+SI + + P ++ +K+ L
Sbjct: 291 VDQDTPKERYLIKNNQLVVINQLTSGGGGVFS-LFKSITAGRVITAESIGPVMEKMKEHL 349
Query: 347 MTKNVA--------------------------------AMEEALVRILTPRRSIDILRDV 374
+TKNVA ++EEALV+IL+P+ ID+L+D
Sbjct: 350 ITKNVAIEIADKLCSSVTGKLDGKTIGTFSGIQSVVKSSVEEALVQILSPKVRIDVLQDA 409
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
AKE +P+VV F GVNGVGKSTNLAK+ +WLL++ + V++AACDTFRSGAVEQL+TH
Sbjct: 410 LKAKEAGRPFVVTFCGVNGVGKSTNLAKICFWLLENGLRVLIAACDTFRSGAVEQLKTHT 469
Query: 435 RRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
RL +V +FE+GY KD A + EA+ A + DVVLVDTAGRMQDNE
Sbjct: 470 CRLSSLHPPEREGGPPRVLLFERGYGKDAASICMEAVNFARQQRYDVVLVDTAGRMQDNE 529
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL--SSSPNPQLIDGILL 539
PLM +L+KLI +N+PDLVLFVGEALVGN+AVDQL KFN+ L D SS NP+ IDGI+L
Sbjct: 530 PLMVSLAKLIRVNSPDLVLFVGEALVGNEAVDQLVKFNRALIDFADSSDQNPRSIDGIVL 589
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
TKFDTIDDKVGAA+SM Y +G P++FVG GQ+Y DL+ LNV+++V LLK
Sbjct: 590 TKFDTIDDKVGAAISMTYTTGQPIVFVGTGQTYQDLRTLNVQAVVAALLK 639
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 91/160 (56%), Gaps = 28/160 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSP-IDTLIRSCLLEERSGLASFNYDSAGAAYTL 59
ML+ IFT+GG++LW + G AL +P +++L+++ LL+ER G+ FN++S L
Sbjct: 1 MLDLFTIFTKGGIVLWYFQ--GTALSLTPAVNSLVKTVLLQERGGMDVFNHES----LKL 54
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD--------YSDFDE 111
++ NE L+FV VYQ+IL L Y+D L+ ++ +F + Y + T+ YS+F +
Sbjct: 55 QFKLDNEFELIFVVVYQKILQLAYLDKLMEQVQLAFRDKYKNRLTNSTPLNPSMYSEFGD 114
Query: 112 MFRQLR-------KEAEARAEEL------KKSKQVTKPMN 138
+F+ + +++ + E+ KK + VTKP N
Sbjct: 115 VFKNILFSLEEADRQSRQKPREMKHWNGTKKKENVTKPFN 154
>gi|402218379|gb|EJT98456.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 655
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/329 (50%), Positives = 213/329 (64%), Gaps = 54/329 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------- 353
GWF ++ + G L +L+P L A+K+ LM KNVAA
Sbjct: 326 GWFGNIVSRLTGSRMLTDQELQPVLGAMKEHLMRKNVAAEIADKVVESVGRELRGKKVTG 385
Query: 354 -----------MEEALVRILTPRRSIDILRDVHAAKEQRK-----PYVVVFVGVNGVGKS 397
+ ++ RILTP+ S D+L + A + PY + FVGVNGVGKS
Sbjct: 386 FKGIKTEVRAALSASITRILTPKTSTDLLLSIRAKRSSSLLSSPVPYSLTFVGVNGVGKS 445
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------------VPIFEKG 445
TNL+KVA+WLLQ+ + V++AACDTFRSGAVEQLR H R L V +FEKG
Sbjct: 446 TNLSKVAFWLLQNGLEVLVAACDTFRSGAVEQLRVHVRNLTLLGGAQAGGGRRVELFEKG 505
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
Y KD A +A+EAI A N DVVL+DTAGRMQDNEPLMRALSKL+ +NNPD ++FVGEA
Sbjct: 506 YGKDAAGIAREAIAYAKENAFDVVLIDTAGRMQDNEPLMRALSKLVAVNNPDKIIFVGEA 565
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPN-----PQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
LVGN+AVDQL+KF++ L D S+S + IDG+L+TK+DT+DDKVGAALSM YV+G
Sbjct: 566 LVGNEAVDQLTKFDRSLKDFSASSGLGAGRGRGIDGMLVTKWDTVDDKVGAALSMTYVTG 625
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++FVGCGQ+YTDL++L V IV LL+
Sbjct: 626 QPILFVGCGQTYTDLRQLRVGHIVDALLR 654
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEE--RSGLASFNYDSAGAAYT 58
ML+ I +GGL+LWT ++ G P++ L+R L+E RS + Y+ G Y
Sbjct: 1 MLDHCSISHKGGLVLWTRSFTPSSPLG-PVNALVREALIEGQGRSDGETEGYEKDG--YA 57
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
++WT NE+ L+FV YQR LHL Y+ LLA +K F +++ P
Sbjct: 58 IRWTTSNEMELIFVVAYQRFLHLSYIPSLLAQLKSFFLKLFTP 100
>gi|341900182|gb|EGT56117.1| hypothetical protein CAEBREN_06988 [Caenorhabditis brenneri]
Length = 629
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/405 (47%), Positives = 251/405 (61%), Gaps = 50/405 (12%)
Query: 233 SKGSNPDPKKKITKKNRVWDDS--PPESK-LDFTDPAGGNGSNIEVEAADHGESMMDKEE 289
+ G P K K+ RVW S P + K LD +DP +G+ E ESM D+
Sbjct: 225 ATGDTPTSPKPKGKQARVWALSGKPSDLKSLDRSDPKENDGNAAAEEVNRLAESMRDQIG 284
Query: 290 VFSSDSESEEDEEVGKHNKPDAKKT-------GWFSSMFQSIAGKANLDKADLEPALKAL 342
D S ++ + N D + GWFS M + + G+ L DL P ++ +
Sbjct: 285 SLRGDLRSLQESDDEDENDNDENEQQVVKSSGGWFS-MIKGLVGEKKLTAEDLTPLVEKM 343
Query: 343 KDRLMTKNVAA--------------------------------MEEALVRILTPRRSIDI 370
+D L+ KNVAA + E+LV++LTP+ +DI
Sbjct: 344 RDNLIMKNVAAEPAEKICQSVVSKLEGKVVNNFSRVAQEVKTAVRESLVQLLTPKHRVDI 403
Query: 371 LRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 430
LRDV AK +PYV+VF GVNGVGKSTNLAK+ +WL ++ V++AA DTFR+GAVEQL
Sbjct: 404 LRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENNHRVLIAAGDTFRAGAVEQL 463
Query: 431 RTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
RTH R L V ++E+GY KD A +A AI+ A DVVLVDTAGRMQDNEPLM
Sbjct: 464 RTHTRCLNDLHKNSVYLYEQGYGKDAAGLAAAAIKIAAERDFDVVLVDTAGRMQDNEPLM 523
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS-PNPQLIDGILLTKFD 543
R L+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LA+ +S P+LIDGI+LTKFD
Sbjct: 524 RELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHASPGQKPRLIDGIVLTKFD 583
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
TIDDKVGAA+SM Y++G P++FVGCGQ+Y+DL+ LNV ++V +LL
Sbjct: 584 TIDDKVGAAVSMTYITGQPIVFVGCGQTYSDLRNLNVGAVVHSLL 628
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 19/146 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IFT+GG+ LW+ +E + + + LI+S L+E++ N YT+K
Sbjct: 1 MIELFSIFTKGGVCLWSYQESDHCFTDTINNELIKSTLMEDKGN----NGQKKVGNYTMK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF-----------SEIYDPKRTDYSDF 109
+ NE +VF+ +YQ I++L Y + LL ++ SF + +Y P Y+ F
Sbjct: 57 FQLDNEYNVVFLVIYQTIVNLNYAEKLLNLVVDSFRGEFADSLKDETALYTPPSIIYNSF 116
Query: 110 DEMFRQLRKEA--EARAEE--LKKSK 131
D+ F+ + +A ARA E +KK K
Sbjct: 117 DDTFQDVLSKAAKSARATEAVVKKPK 142
>gi|392596076|gb|EIW85399.1| signal recognition particle binding protein [Coniophora puteana
RWD-64-598 SS2]
Length = 663
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/414 (44%), Positives = 244/414 (58%), Gaps = 74/414 (17%)
Query: 249 RVWDDSPPE----SKLDFTDPAGGNGSNIE-------VEAADHGESMMDK-EEV--FSSD 294
R W D P + LDF+ + NI V+ A G D EV + D
Sbjct: 248 RKWGDQVPTEEDMASLDFSSDKPNDAGNIGSHDLQALVDQASLGTRTNDGLYEVKDWEFD 307
Query: 295 SESEEDEEV-----GKHNKPDAKKT-GWFSSMFQSIAGKANLDKADLEPALKALKDRLMT 348
S+++E ++V G +K + G S F G L + DL+PAL+ +K LM
Sbjct: 308 SQTDEADDVIARTMGSQVAEQSKGSLGALGSFFARFTGSKVLTEEDLKPALEGMKQHLMK 367
Query: 349 KNVA-------------------------------AMEEALVRILTPRRSIDILRDVHA- 376
KNVA A+ ++ RILTP+ S D+L +
Sbjct: 368 KNVAKNIADKVCEGVGESLVGKKLGFQTTGNAVRTALSTSITRILTPKTSTDLLLSIRTK 427
Query: 377 ------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 430
+ +QR PY + FVGVNGVGKSTNL+KV +WL+Q+ V++AACDTFRSGAVEQL
Sbjct: 428 LSTPVPSAQQRMPYSITFVGVNGVGKSTNLSKVCFWLIQNGFRVLIAACDTFRSGAVEQL 487
Query: 431 RTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
R H R L +V +FE+GY KD A +AKEAI N DVVL+DTAGRM
Sbjct: 488 RVHVRNLGMLGVNGATNSKGRVELFERGYGKDAAGIAKEAIAYGKDNDFDVVLIDTAGRM 547
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP---QLI 534
QDNEPLMRAL+KL+ +NNPD ++FVGEALVGN+AVDQL+KF++ L D SS+ + I
Sbjct: 548 QDNEPLMRALAKLVAVNNPDRIIFVGEALVGNEAVDQLTKFDRALRDFSSASGAGKGRGI 607
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DG+L+TK+DT+DDKVGAALSM YV+G P+ FVGCGQ+YTDL++L V ++VK +L
Sbjct: 608 DGMLVTKWDTVDDKVGAALSMTYVTGQPIFFVGCGQTYTDLRQLRVGNVVKAIL 661
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 1 MLEQLLIFTRGGLILWT---CKELGNA--LKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG +LW+ E+ SP+++LIR L+E R+ A YD G
Sbjct: 1 MLDHCSISHKGGFVLWSRSFTPEVAQTASSSSSPVNSLIRDALIEGRN--ADDKYDKDG- 57
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY 106
YT+KWTF N+L L+FV YQRIL L YV+DLLA +K F ++Y+P T +
Sbjct: 58 -YTVKWTFVNDLELIFVVAYQRILQLTYVEDLLAAIKTLFMKLYEPFLTTF 107
>gi|403416238|emb|CCM02938.1| predicted protein [Fibroporia radiculosa]
Length = 676
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 186/436 (42%), Positives = 258/436 (59%), Gaps = 80/436 (18%)
Query: 233 SKGSNPDPKKKITKKNRVW-DDSPPES---KLDFTDP---AGGNGSNIEVEA-ADHGESM 284
S P +K K R W D++P ES LDF+ A +++++ A D G
Sbjct: 239 SDSDTPTKRKPKAKAQRKWGDEAPSESDMASLDFSYEKIDANSQAASVDLSALVDEGSLG 298
Query: 285 MDKEEVFS-------SDSESEEDEEVGK----HNKPD-------AKKTGWFSSMFQSIAG 326
M ++ S+ +S+ D+ V + + +P+ G S+F + G
Sbjct: 299 MRTQDGLYEVKDWEFSNGKSDADDVVSQVLKGNMQPEKSASSSSVGSLGALGSLFARLTG 358
Query: 327 KANLDKADLEPALKALKDRLMTKNVA--------------------------------AM 354
L ++DL+P L+ +K LM KNVA A+
Sbjct: 359 SKVLTESDLKPVLEGMKQHLMKKNVAKDIAEKVCEGVGESLVGKKVGGFQTTNAAVRLAL 418
Query: 355 EEALVRILTPRRSIDILRDVH-------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL 407
+L RILTP+ S D+L + + +QR+PY + FVGVNGVGKSTNL+KV +WL
Sbjct: 419 SNSLTRILTPKTSTDLLLSIRNKLSSPLPSSQQRQPYSITFVGVNGVGKSTNLSKVCFWL 478
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVA 454
+Q+ + V++AACDTFRSGAVEQLR H R L +V ++E+GY KD A +A
Sbjct: 479 IQNGMRVLIAACDTFRSGAVEQLRVHVRNLSMLGVNGATNSKGRVELYERGYGKDAAGIA 538
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
KEAI A N DVVL+DTAGRMQDNEPLMRAL+KL+ +N PD +LFVGEALVGN+AVDQ
Sbjct: 539 KEAIAHARDNDFDVVLIDTAGRMQDNEPLMRALAKLVAVNTPDKILFVGEALVGNEAVDQ 598
Query: 515 LSKFNQKLADLSSSPN--PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY 572
L+KF++ L D S+S + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGCGQ+Y
Sbjct: 599 LTKFDRALRDFSASSGGKERGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGCGQTY 658
Query: 573 TDLKKLNVKSIVKTLL 588
TDL++L V ++V+ +L
Sbjct: 659 TDLRQLRVANVVQAIL 674
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 1 MLEQLLIFTRGGLILWT-----CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG++LW+ A SP+++LIR L+E R+ + D
Sbjct: 1 MLDHCSISHKGGIVLWSRSFTPAASQTAASAASPVNSLIREALIEGRTAEDKYEKD---- 56
Query: 56 AYTLKWTFHNELGLVFV-----AVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
Y +KWTF N+L L+FV YQRIL L YVD+LLA +K F ++++P
Sbjct: 57 GYAVKWTFVNDLELIFVRSPPQVAYQRILQLTYVDELLAALKTVFVKLFEP 107
>gi|393220263|gb|EJD05749.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 667
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 190/438 (43%), Positives = 256/438 (58%), Gaps = 82/438 (18%)
Query: 233 SKGSNPDPKKKITKKNRVW-DDSPPES---KLDFTDPAGGNGSNIEVEAADHG-ESMMDK 287
S P KK K R W +++P E+ LDF+ G G + AA ++++DK
Sbjct: 228 SDSDTPSKKKGKAKSQRKWGNEAPTEADMESLDFSVDKPGAGPDSRRPAASPDVDALVDK 287
Query: 288 EEVFSSDSESE---EDEEVGKHN---------------KPDAKKT----GWFSSMFQSIA 325
+ + + + +D E K N + + +K+ G S+F +
Sbjct: 288 DSLGTRREDGLYEIKDWEFNKGNDGADFISRALAAQQQREEPQKSNGSLGALGSIFARLT 347
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G L ++DL+P L+++K LM KNVA A
Sbjct: 348 GSKVLTESDLKPVLESMKQHLMKKNVAKEIADKICEGVGEGLVGKKVGGFQTINATVRQA 407
Query: 354 MEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+ +L RILTP S D+L V + +QR PY +VFVGVNGVGKSTNL+KV +W
Sbjct: 408 LSTSLTRILTPSTSTDLLLSVRTKLSSPLPSTQQRLPYSMVFVGVNGVGKSTNLSKVCFW 467
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------------VPIFEKGYEKDPAIVA 454
L+Q+ V++AACDTFRSGAVEQLR H R L V +FE+GY KD A +A
Sbjct: 468 LIQNGFKVLIAACDTFRSGAVEQLRVHVRNLGMLDVSGPDGKGGVELFERGYGKDAAGIA 527
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
KEAI A + DVVL+DTAGRMQDNEPLMRAL+KL+ NNPD ++FVGEALVGN+AVDQ
Sbjct: 528 KEAITYAKDHNFDVVLIDTAGRMQDNEPLMRALAKLVSTNNPDKIIFVGEALVGNEAVDQ 587
Query: 515 LSKFNQKLADLSSSPNP----QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
LSKF++ L D SS+ + IDG+L+TK+DT+DDKVGAALSM YV+G P++FVGCGQ
Sbjct: 588 LSKFDRALRDFSSASETTGRGRGIDGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGCGQ 647
Query: 571 SYTDLKKLNVKSIVKTLL 588
+YTDL++L V ++V+ LL
Sbjct: 648 TYTDLRQLRVSNVVQALL 665
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKG------SPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ I +GGL+LW A + SP+++LIR L+E RSG + D
Sbjct: 1 MLDHCSISHKGGLVLWKRSFTPTAAQSVANPSTSPVNSLIRDVLIEGRSGENKYEKD--- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
Y ++WTF NEL L+FV YQRIL L YV+DLLA +K F ++++P
Sbjct: 58 -GYAIRWTFVNELELIFVVAYQRILQLTYVEDLLAAIKALFVKLFEP 103
>gi|339244977|ref|XP_003378414.1| signal recognition particle receptor subunit alpha [Trichinella
spiralis]
gi|316972676|gb|EFV56341.1| signal recognition particle receptor subunit alpha [Trichinella
spiralis]
Length = 665
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 244/696 (35%), Positives = 341/696 (48%), Gaps = 138/696 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E L IFT+GG++LW + L I+ ++++ +L ER A Y +
Sbjct: 1 MIEHLCIFTKGGVVLWNVEPPSEQLSAG-INAILKTVVLHERMDKAVHEYGD----FAFH 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP---------KRTD---YSD 108
N+ L+++ Y + + Y D+ LA F++ YD +R D ++D
Sbjct: 56 LCLDNKFELIYLLAYPSVSPVGYADEFLAEFADIFAQQYDLVLRDRGALLQRCDSDYFAD 115
Query: 109 FDEMFRQL-RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDD 167
F L RK + +L T +N K+ L
Sbjct: 116 VLTTFNHLTRKFCRIQDNKLPAKTMRTFEQSNKAKRNATLLV------------------ 157
Query: 168 GDSDNMRGRKLENGHSNVGNVEIEESRVTGVANG----------KENTSSNIGAFDVSKL 217
D+ + +K N SN NV S V A+G EN+SS + SKL
Sbjct: 158 -DASQKKNKKQNNTASNSKNVN---SAVPVPASGIPTKLDANATVENSSSTVVV--ESKL 211
Query: 218 QKLRNKGGKKTDT---------VVSKGSNPDPKKKITKKNRVWDDSPPESK------LDF 262
K+R K+T ++ K+K K+NR WD+ + LDF
Sbjct: 212 AKMRENFLKRTQAKEKKSSSSSGGKLAADSTSKRKKVKENRRWDEIGGNCQFYDMNELDF 271
Query: 263 T-------DPAGG---------NGSNIEVEAADHGE-------------SMMDKEEVFSS 293
+ DP G N ++IE + G+ ++++ S
Sbjct: 272 SSSQTNAGDPTAGAAAAVDPLLNRASIEEQRRYVGQMRGELGGLSDDDHLDEEEDDERSV 331
Query: 294 DSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA 353
S ++ + +NK K G + FQS+ G L L L+ +K++L+ KNVAA
Sbjct: 332 TSGQKQFDSTAANNKK--KGGGGLLAAFQSLVGNKTLTDDLLLGPLEKMKEQLIGKNVAA 389
Query: 354 --------------------------------MEEALVRILT-PRRSIDILRDVHAAKEQ 380
+ LV++L P R+ +LRD+ A+E
Sbjct: 390 EVADKLCQSVRTSLRGSVVGQFSLIAGVVRDAFRQCLVQLLLKPERNSCLLRDIFQARES 449
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-- 438
+ Y +VF GVNGVGKSTNLAKVA+WL ++ V++AACDTFR+GAVEQLRTH R L
Sbjct: 450 ARCYSIVFCGVNGVGKSTNLAKVAFWLNENGFRVLIAACDTFRAGAVEQLRTHVRYLDEL 509
Query: 439 ----VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
V ++E+GY KD A VA AI A N DVVLVDTAGRMQDNEPLMRAL KLI +N
Sbjct: 510 HPGLVQLYEQGYGKDAAAVAASAISYAEANNLDVVLVDTAGRMQDNEPLMRALGKLIRVN 569
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL-IDGILLTKFDTIDDKVGAAL 553
PDLVLFVGEALVGN+AVDQL KF++ L D ++ IDGI+LTKFDTIDDKVGAA+
Sbjct: 570 EPDLVLFVGEALVGNEAVDQLQKFSRALIDCAAVDQQDTPIDGIMLTKFDTIDDKVGAAV 629
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
SM Y++G P++FVG GQ+Y DLK+L+ +V LL+
Sbjct: 630 SMTYITGKPILFVGTGQTYKDLKQLDANVVVNALLR 665
>gi|70951146|ref|XP_744837.1| signal recognition particle receptor alpha subunit, [Plasmodium
chabaudi chabaudi]
gi|56524952|emb|CAH76902.1| signal recognition particle receptor alpha subunit, putative
[Plasmodium chabaudi chabaudi]
Length = 532
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/303 (52%), Positives = 206/303 (67%), Gaps = 34/303 (11%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------MEEALV---------- 359
S+F+ + ++++D+E L+ +K +L++KNVA M+E L+
Sbjct: 229 SIFKMFSSNNTIEESDIEKILQDIKTKLLSKNVAVGICDVLIETMKEKLIGQKKTMFSLN 288
Query: 360 --------------RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
IL P+ S+D+LR AK K Y + F+GVNGVGKSTNLAKV Y
Sbjct: 289 VKKTVSTIFSDTLQSILIPKDSVDVLRSALEAKSLGKLYSICFLGVNGVGKSTNLAKVCY 348
Query: 406 WL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
+L + + +M+AACDTFR+GA+EQLR HA+ L V +FEKGY K+ A +AK+AI A +
Sbjct: 349 YLKSKGNLKIMIAACDTFRAGAIEQLRIHAKCLDVHLFEKGYGKNAAAIAKDAISYAKKE 408
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DV+L+DTAGRMQDNEPLMR+L KLI +NNPDL+LFVGEALVGNDA+DQL KFNQ L D
Sbjct: 409 KYDVILIDTAGRMQDNEPLMRSLGKLILINNPDLILFVGEALVGNDAIDQLKKFNQTLID 468
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ N + IDGI+LTKFDT+DDKVG ALSMVY++G P++FVG GQ YT LKK NV +V
Sbjct: 469 ATCDTNKRTIDGIILTKFDTVDDKVGTALSMVYLTGRPIVFVGVGQKYTHLKKFNVNMVV 528
Query: 585 KTL 587
K L
Sbjct: 529 KAL 531
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 35/192 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ + IF +GG++LW+ ++ + I T+I++ L+E + + + Y K
Sbjct: 1 MIDVINIFNKGGIVLWSYNFY--EIEENIIRTIIKTGLIEGQHE----EFSNKHNKYYSK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS-----DFDEMFRQ 115
W F N+L +V + VYQ I + Y+D+L +K+ F ++ P + +FD+ F +
Sbjct: 55 WKFVNDLDMVILIVYQGIQNSAYLDNLFNKIKKHFVKLIPPNFNLFEYDLPINFDKQFLK 114
Query: 116 LRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDS----- 170
+ +E++ +A E + K +N K +GG+ AND+ DS
Sbjct: 115 ILEESD-KAMERSTTDSANKNNSNNKSEGGE-----------------ANDENDSEASGK 156
Query: 171 -DNMRGRKLENG 181
DN +G+ +N
Sbjct: 157 RDNKKGKTKKNA 168
>gi|406696438|gb|EKC99727.1| signal recognition particle binding protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 732
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 227/660 (34%), Positives = 325/660 (49%), Gaps = 151/660 (22%)
Query: 1 MLEQLLIFTRGGLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ + I + GLILW+ +L ++ SP+++LI+ L+E ++ ++ G
Sbjct: 1 MLDHISISHQSGLILWSRSFTPAFTDLAASVN-SPVNSLIKEALIEGKARGEDEVFERDG 59
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDF----- 109
Y+++WT N LGLVFV V+ +L L Y+ +L +KQ F +++P D
Sbjct: 60 --YSVRWTMENGLGLVFVVVFPALLPLTYIPAMLQRVKQLFLSLFEPYLQSLVDVLSNRG 117
Query: 110 ---DEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAND 166
D+ LR E E+ + K + + N + GG RS
Sbjct: 118 GVVDQSRSALRTLGEKIVED-RWDKIFDRCLKNFEGSGG------------RSRSLPQRP 164
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGK 226
D DN R + NV+ + R+ G KGG+
Sbjct: 165 DVSDDN---RAAPSAEEIAKNVQALKGRMKG------------------------RKGGR 197
Query: 227 KTDTVVSKGSNPDPKK---KITKKNRVWDDSPPESK----LDFTDPAGGNGS-------- 271
+T +K K R W DS S+ LD++ PA +
Sbjct: 198 GRNTASPSPVPSPSRKASGTTAKLMRKWGDSQVSSQDMAALDYSAPAPETATVDVDALVS 257
Query: 272 -----------NIEVEAADHGES--MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFS 318
N EV D+G + + +EE+ + ++ + ++ + + +G ++
Sbjct: 258 TDAMGTRTATGNYEVADWDYGRTDDLPTEEEILARRTQKLKIDDDDEE----PEDSGTWT 313
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
+MF ++GK L K DL P L ++ LM+KNVA
Sbjct: 314 NMFSRLSGKKVLTKEDLRPVLADMEKHLMSKNVAKDIAEKLCDAVGSAIVGKKLGGLTSV 373
Query: 353 ------AMEEALVRILTPRRSIDILRDVHAAKEQRK----------PYVVVFVGVNGVGK 396
A+ +++ RILTP+ S DIL D+ + Q PY + FVGVNGVGK
Sbjct: 374 KSEVQRALSDSMTRILTPKTSTDILVDIQRKRSQPSSIADPNSPPDPYAITFVGVNGVGK 433
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-----------------QV 439
STNL+KV +WLLQ+ + V++AACDTFRSGAVEQLR H R L ++
Sbjct: 434 STNLSKVCFWLLQNNMRVLIAACDTFRSGAVEQLRVHVRNLGALGDELGMGTDAAGQRRI 493
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
++E+GY KD A +AK+AI A N DVVL+DTAGRMQDNEPLMRAL+KL+ +NNPD +
Sbjct: 494 ELYERGYGKDAAGIAKDAIAYAKENRFDVVLIDTAGRMQDNEPLMRALAKLVTVNNPDKI 553
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSS---SPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+FVGEALVGN+AVDQL+KF++ L D SS S + IDGILLTKFDTIDDKVGAALSM
Sbjct: 554 VFVGEALVGNEAVDQLTKFDRALKDFSSASGSTKRRGIDGILLTKFDTIDDKVGAALSMT 613
>gi|68072141|ref|XP_677984.1| signal recognition particle receptor alpha subunit, [Plasmodium
berghei strain ANKA]
gi|56498300|emb|CAH97107.1| signal recognition particle receptor alpha subunit, putative
[Plasmodium berghei]
Length = 546
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 239/395 (60%), Gaps = 45/395 (11%)
Query: 228 TDTVVSKGSNPDPKKKITKKN-RVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMD 286
+DT S + KK TKKN R W+ + +K D +++ + E+ +
Sbjct: 161 SDTNKSTSGKCENKKSKTKKNAREWELNKKITKKDIE----------KLDYSSKSENKNN 210
Query: 287 KEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
E+ + E ++ + + + S+ + ++++D+E L+ +K +L
Sbjct: 211 SNEIVKYEGEFDDSSDSSITENKNNIMSQLNDSILKMFLSNNTIEESDIEKILQEIKTKL 270
Query: 347 MTKNVAA---------MEEALV------------------------RILTPRRSIDILRD 373
++KNVA+ M+E L+ IL P+ S+D+LR
Sbjct: 271 LSKNVASEICDILIERMKEKLIGKKKTMFSLNVKKTVSTIFSDTLQSILIPKDSVDVLRS 330
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRT 432
AK K Y + F+GVNGVGKSTNLAKV Y+L + + +M+AACDTFR+GA+EQLR
Sbjct: 331 ALEAKSLGKLYSICFLGVNGVGKSTNLAKVCYYLKTKGNLKIMIAACDTFRAGAIEQLRI 390
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HA+ L V +FEKGY K+ A +AK+AI A + DV+L+DTAGRMQDNEPLMR+L KLI
Sbjct: 391 HAKCLDVYLFEKGYGKNAAAIAKDAISYAKKEKYDVILIDTAGRMQDNEPLMRSLGKLIL 450
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+NNPDL+LFVGEALVGNDA+DQL KFNQ L D + + + IDGILLTKFDT+DDKVG A
Sbjct: 451 INNPDLILFVGEALVGNDAIDQLKKFNQTLIDATCDTHKRTIDGILLTKFDTVDDKVGTA 510
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
LSMVY++G P++FVG GQ YT LKK NV +VK L
Sbjct: 511 LSMVYLTGRPIVFVGVGQKYTHLKKFNVNMVVKAL 545
>gi|340059189|emb|CCC53572.1| putative signal recognition particle receptor like protein
[Trypanosoma vivax Y486]
Length = 575
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 214/629 (34%), Positives = 320/629 (50%), Gaps = 96/629 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ L I ++GG++LW + + S ++ +I+ LLE+R+G+ ++ Y +
Sbjct: 1 MIDTLSIISKGGVVLWEHSSDSSGRR-SVVNGVIQEFLLEDRTGME----EATIGDYKVH 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY---SDFDEMFRQLR 117
W N+ VAV+ + + + + + +SF++ Y + DF +
Sbjct: 56 WALENQAHFFVVAVFPKFVSCPQMGAFVRDVVRSFAKKYGCMQNFVWGDCDFAHEYALTL 115
Query: 118 KEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRK 177
K+ E + ++ + +P + +Q +D + + M
Sbjct: 116 KKLEVVSSDVD-TYPAAEPQYTVVQQ----------------------EDANDEEME--- 149
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSN 237
N G E+EE+ VT V+ NT V++ + + GKKT V++K ++
Sbjct: 150 ------NEGFQEVEEA-VTSVSYHDANTI-------VTRSGAVIGRKGKKT--VINKSAH 193
Query: 238 PDPKKKITKKNRV---WDDSP--PESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFS 292
+K TK+ + W+ P P + G + +A S + + +
Sbjct: 194 SPTSQKRTKQAKQATRWETPPLDPAVERQMRQQPGATREELMAQAEKQKPSFIRR---LA 250
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
+ S + E N+ D + G +S +S G+ LD D E + L+D+L++KNVA
Sbjct: 251 NGSAAPVRE-----NEWDNQPRGSVASWLRSFVGRRELDSQDFEKVIPGLRDKLISKNVA 305
Query: 353 --------------------------------AMEEALVRILTPRRSIDILRDVHAAKEQ 380
AM +L RIL P+ I+ILR V ++K +
Sbjct: 306 VEVADHVCKSVEASLTGKKLGTFESLQQSIESAMVASLHRILQPKHEINILRAVASSKAR 365
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
RKPY +V GVNGVGKST LAK+ YWL Q+ SV++AA DTFR GAVEQL H L VP
Sbjct: 366 RKPYSIVLCGVNGVGKSTTLAKITYWLQQNGHSVLIAAGDTFRHGAVEQLEIHGHCLGVP 425
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F+ GY DP+ VA AI AT DVV++DTAGRMQD+E M AL+KLI+ N PDL L
Sbjct: 426 VFQMGYGADPSSVAAAAISRATHQELDVVMIDTAGRMQDHESRMHALAKLIHDNQPDLTL 485
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
FVGEALVGN VDQL +FN+ L D + P+ IDGI+LTKFDT+DDKVGAA+SMVY
Sbjct: 486 FVGEALVGNSGVDQLRRFNRCLVDYAPVGTAPRGIDGIVLTKFDTVDDKVGAAISMVYEL 545
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++FVG GQ+Y DLK + +V L+
Sbjct: 546 GQPIVFVGAGQTYQDLKIMAPDVVVSALM 574
>gi|388582570|gb|EIM22874.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Wallemia sebi CBS 633.66]
Length = 604
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 222/652 (34%), Positives = 318/652 (48%), Gaps = 155/652 (23%)
Query: 28 SPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDL 87
SP + ++R ++E R +Y+ AYT+ W+ N+L L+FV Y +++ L YV++L
Sbjct: 6 SPTNHILREGVIEGRLTSTPIDYE----AYTVHWSLENKLDLIFVIAYSKMIQLNYVEEL 61
Query: 88 LAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQL 147
+ KQ F ++ P E+L S +P+N ++
Sbjct: 62 IETTKQLFVSLFKP---------------------LIEQLVNSLSGGEPLNQMESIPSLF 100
Query: 148 QKGGFERGSNRSGGGSAND----DGDSDNMRGRKLEN---GHSNVGNVEIEESRVTGVAN 200
+ G S D D DS+ + KL+N + VE E++ T
Sbjct: 101 K-----------GWDSVFDKLLKDIDSNKKQRAKLQNNKKAAKSTPKVEQGETQSTEKVV 149
Query: 201 GKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDD---SPPE 257
+ N+ A K R K T + + KK K+ R W + S
Sbjct: 150 DANEIAKNVEAM------KARLKASSNTKKAKAAPAADQNTKKSKKEMRNWGNKVTSQEM 203
Query: 258 SKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHN---------- 307
S LDF+ ++ +++ + + + ++ DE G +N
Sbjct: 204 SALDFS------------STSNDSDNVGNLDNLVDKSAKGTYDESTGVYNLAEYNNDDED 251
Query: 308 --------------KPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA 353
+P T F + G +DKA ++P L + LM KNVAA
Sbjct: 252 EDLLDIDIPALETEQPQQDSTWGFLKGLTGLTGGKTIDKATIQPVLANMSMLLMKKNVAA 311
Query: 354 ---------MEEALV-----------------------RILTPRRSIDILRDVHAAKEQR 381
+E+ LV RILTP+ S DIL ++ K++
Sbjct: 312 EISEKVCASVEQQLVGRKIGTFTTIKSEVKNALNNSITRILTPKTSTDILFEISQKKKKA 371
Query: 382 K------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
PY +VF GVNGVGKSTNL+KV YWLL+++++V++AACDTFRSGAVEQLRTH
Sbjct: 372 SSKGGNDPYSLVFCGVNGVGKSTNLSKVCYWLLENRLNVLIAACDTFRSGAVEQLRTHVN 431
Query: 436 RL-----------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
L ++ ++E+GY KD A +A++AI N DVVL+DTAGRMQDNEPLM
Sbjct: 432 NLDNLKLGSGVTSRIELYERGYGKDAAGIARDAIAYGKENKFDVVLIDTAGRMQDNEPLM 491
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP--QLIDGILLTKF 542
RAL+KL+ +N PD ++FVGEALVGN+A DQL KF++ L DLSSS + IDG+LLTKF
Sbjct: 492 RALAKLVSVNKPDKIIFVGEALVGNEATDQLVKFDRALKDLSSSAAVYGRGIDGMLLTKF 551
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCG----------------QSYTDLKKL 578
DTIDDKVGAALSM Y++G P+ FVGCG Q+YTDL++L
Sbjct: 552 DTIDDKVGAALSMTYITGQPIFFVGCGQVGIHPIYKRLLSKVLQTYTDLRQL 603
>gi|414864258|tpg|DAA42815.1| TPA: hypothetical protein ZEAMMB73_088569 [Zea mays]
Length = 327
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 193/338 (57%), Positives = 223/338 (65%), Gaps = 28/338 (8%)
Query: 1 MLEQLLIFTRGGLILWT-CKELGNA-LKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
MLE+LLIFTRGGLILW+ C+ LG A LKGSPID LIRSCLLEERS ASF+ D+ Y
Sbjct: 1 MLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEERSADASFSQDN----YA 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRK 118
LKWTFHN+LGLVFVAVYQ+ILHLLYVDDLLA +++ FS+IYDPKRT Y DF ++FRQL +
Sbjct: 57 LKWTFHNDLGLVFVAVYQKILHLLYVDDLLAAVRKEFSQIYDPKRTSYDDFGDIFRQLHR 116
Query: 119 EAEARAEELKKSKQV--TKPMNNL-KKQGGQLQKGGFERGSNRSGGGS-ANDDGDSD--- 171
EAEAR EE+KKSKQ ++P L +K+ G +GG RG + GGS A DD D D
Sbjct: 117 EAEARTEEMKKSKQALSSRPQPALTQKKPGPKGRGGDSRGGAANKGGSGAKDDSDGDGYG 176
Query: 172 NMRGRKLEN----GHSNVGNVEIEESRVTGVANGKENTS-SNIGAFDVSKLQKLR-NKGG 225
N R L N G N E T V GKEN + + GAFDVSKLQKLR NK
Sbjct: 177 NQDHRTLANGAFKGQENGVRKENSSHGRTVVVKGKENGAPKDEGAFDVSKLQKLRANKKN 236
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNI-EVEAADHGESM 284
TD K + PD KKK K++RVWDD P KLDFTDPA G + + A GESM
Sbjct: 237 GATDNGTKKLTKPDIKKK-GKQDRVWDDKPSNKKLDFTDPADERGDEVADNVAVIEGESM 295
Query: 285 MDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQ 322
MDK+E SSDSE EE E+ KK GWFSSMFQ
Sbjct: 296 MDKDEDLSSDSEDEEVED-------GPKKKGWFSSMFQ 326
>gi|401888394|gb|EJT52352.1| signal recognition particle binding protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 757
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 228/660 (34%), Positives = 334/660 (50%), Gaps = 126/660 (19%)
Query: 1 MLEQLLIFTRGGLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ + I + GLILW+ +L ++ SP+++LIR L+E ++ ++ G
Sbjct: 1 MLDHISISHQSGLILWSRSFTPAFTDLAASVN-SPVNSLIREALIEGKARGEDEVFERDG 59
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDF----- 109
Y+++WT N LGLVFV V+ +L L Y+ +L +KQ F +++P D
Sbjct: 60 --YSVRWTMENGLGLVFVVVFPALLPLTYIPAMLQRVKQLFLSLFEPYLQSLVDVLSNRG 117
Query: 110 ---DEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAND 166
D+ LR E EE + K + + + GG+ + +R + + G
Sbjct: 118 GVVDQSRSALRTLGEKIVEE-RWDKIFDRCLKTFEGSGGR-SRSLPQRQIHLTAG----- 170
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGK 226
+D+ + G +++R A E + N+ A K + KGG+
Sbjct: 171 --PTDSSKLTPATAFQLTPGPDVSDDNRA---APSAEEIAKNVQAL---KGRMKGRKGGR 222
Query: 227 KTDTVVSKGSNPDPKK---KITKKNRVWDDSPPESK----LDFTDPAGGNGS-------- 271
+T +K K R W DS S+ LD++ PA +
Sbjct: 223 GRNTASPSPVPSPSRKASGTTAKLMRKWGDSQVSSQDMAALDYSAPAPETATVDVDALVS 282
Query: 272 -----------NIEVEAADHG--ESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFS 318
N EV D+G + + +EE+ + ++ + ++ + + +G ++
Sbjct: 283 TDAMGTRTATGNYEVADWDYGRNDDLPTEEEILARRTQKLKIDDDDEE----PEDSGTWT 338
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
+MF ++GK L K DL P L ++ LM+KNVA
Sbjct: 339 NMFSRLSGKKVLTKEDLRPVLADMEKHLMSKNVAKDIAEKLCDAVGSAIVGKKLGGLTSV 398
Query: 353 ------AMEEALVRILTPRRSIDILRDVHAAKEQRK----------PYVVVFVGVNGVGK 396
A+ +++ RILTP+ S DIL D+ + Q PY + FVGVNGVGK
Sbjct: 399 KSEVQRALSDSMTRILTPKTSTDILVDIQRKRSQPSSIADPNSPPDPYAITFVGVNGVGK 458
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-----------------QV 439
STNL+KV +WLLQ+ + V++AACDTFRSGAVEQLR H R L ++
Sbjct: 459 STNLSKVCFWLLQNNMRVLIAACDTFRSGAVEQLRVHVRNLGALGDELGMGTDAAGQRRI 518
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
++E+GY KD A +AK+AI A N DVVL+DTAGRMQDNEPLMRAL+KL+ +NNPD +
Sbjct: 519 ELYERGYGKDAAGIAKDAIAYAKENRFDVVLIDTAGRMQDNEPLMRALAKLVTVNNPDKI 578
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSS---SPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+FVGEALVGN+AVDQL+KF++ L D SS S + IDGILLTKFDTIDDKVGAALSM
Sbjct: 579 VFVGEALVGNEAVDQLTKFDRALKDFSSASGSTKRRGIDGILLTKFDTIDDKVGAALSMT 638
>gi|300120716|emb|CBK20270.2| unnamed protein product [Blastocystis hominis]
Length = 565
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 207/306 (67%), Gaps = 32/306 (10%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G + + + G+ + +L P + +LK +L+ KNVA
Sbjct: 259 GKLTGFMKRLVGETPITNEELTPVIDSLKKKLVEKNVATDIADSICENVRTKILGKKLGG 318
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
A+EE++ ILT R S+DILR V A++Q K + +VF GVNGVGKST+L+K
Sbjct: 319 IKSVTSVVRAALEESIESILTTRSSVDILRLVQDARKQGKTFSIVFCGVNGVGKSTSLSK 378
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEAT 462
VAY+ + V++AACDT+RSGAVEQLR H RL + +FE+GY KDP+ VA A++ A
Sbjct: 379 VAYYFKSKGLRVLLAACDTYRSGAVEQLRVHVDRLGLDLFERGYTKDPSDVAYYALRYAN 438
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G DV L+DTAGRMQ+NE LMR+L KL+ +N+PDL+LFVGEALVGND VDQL +FN+ L
Sbjct: 439 EQGFDVCLIDTAGRMQNNEGLMRSLVKLVNVNHPDLILFVGEALVGNDGVDQLREFNRAL 498
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
DLS P+L+DGI+LTKFDTIDDKVGAALSMVY +G P++FVG GQ YT+LK+LNVK
Sbjct: 499 HDLSDLAEPRLVDGIVLTKFDTIDDKVGAALSMVYCTGKPIVFVGTGQKYTNLKRLNVKD 558
Query: 583 IVKTLL 588
+V LL
Sbjct: 559 VVNLLL 564
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 16/136 (11%)
Query: 1 MLEQLLIFTRGGLILWT---CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY 57
M++ IFT GL+LW+ C+ LKG+PI+ LI+ +L ER+ F YD Y
Sbjct: 1 MIDLFCIFTTTGLVLWSKSFCE-----LKGTPINKLIKDVILVERTNEKVF-YDDQ---Y 51
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD---PKRTDYS-DFDEMF 113
LKW+F+N+LGLVFV VYQRIL L+YVDDLLA +K++F + P T DFDE F
Sbjct: 52 ALKWSFNNDLGLVFVVVYQRILQLMYVDDLLAAVKKAFVTSFKDSLPVTTICEFDFDEQF 111
Query: 114 RQLRKEAEARAEELKK 129
QL E+ ++ K+
Sbjct: 112 SQLLDSVESASQRSKR 127
>gi|145342437|ref|XP_001416189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576414|gb|ABO94482.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 525
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 139/236 (58%), Positives = 187/236 (79%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++EE+++RIL+ + ID+L +V +A++ R+P+V+ FVGVNGVGKST+L+KV +WL Q
Sbjct: 287 SLEESIIRILSSAKKIDLLTEVGSARKSRRPFVIAFVGVNGVGKSTSLSKVVHWLSQQNF 346
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SVM+AACDTFR+GAVEQLRTH +RL +FE+GYE+DP+++A++AIQ+ATR G DVV++D
Sbjct: 347 SVMVAACDTFRAGAVEQLRTHCQRLDCALFERGYERDPSVIAQQAIQQATRQGIDVVMID 406
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLMRAL+KL+ +N PDL LFVGEALVGND V Q+ +F +L L +
Sbjct: 407 TAGRMQDNEPLMRALAKLLSVNLPDLTLFVGEALVGNDGVSQILQFEHRLQALMQTEKKC 466
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+IDGI L+KFDTID+KVG ALS+VY S P+MFVG GQ Y D++ ++I LL
Sbjct: 467 VIDGIFLSKFDTIDNKVGTALSLVYASSIPIMFVGTGQMYKDVRTFQAENIATVLL 522
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 2 LEQLLIFTRGGLIL-WTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY--- 57
L+Q+ +F+RGGL+L C K + T + C +S + + +S AAY
Sbjct: 4 LKQVSVFSRGGLVLVHEC-----FTKEVVLLTELSECAHTLKSD-SDRSIESRIAAYDSQ 57
Query: 58 --TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQ 115
+ W GL F+ ++ L DDLL K +F+E Y+ R DYS+F
Sbjct: 58 KSKVIWLSDAVTGLTFILSFEEALEKHEADDLLRTSKDAFAEYYEHDRFDYSEFLPAL-- 115
Query: 116 LRKEAEARAEELKKSKQ 132
+AR ++L++S +
Sbjct: 116 -----QARIQQLERSNE 127
>gi|301622214|ref|XP_002940432.1| PREDICTED: signal recognition particle receptor subunit alpha
[Xenopus (Silurana) tropicalis]
Length = 578
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 221/634 (34%), Positives = 319/634 (50%), Gaps = 102/634 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GG++LW + + + G P++ LIRS +L+ER G +N+DS TLK
Sbjct: 1 MLDFFTIFSKGGIVLWCFQGVPASFTG-PVNALIRSVILQERGGNNYYNHDS----LTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD-------------YS 107
+ N+ LVFV YQ+IL L YVD L+ + + F + Y +
Sbjct: 56 YKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRDKYRNQIQHNGTLGLLNGSFEFQD 115
Query: 108 DFDEMFRQLRKEAEARAEE-LKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAND 166
DF+ + R + ++ARA +K+ +Q K +K ++K G + N ++
Sbjct: 116 DFNTILRAAEESSKARAPPAMKRFEQSLKSQKTVK---SMIEKPGDKVKENNKKNKASKK 172
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGK 226
+ KL + ++S + E T+ I + + + KGG
Sbjct: 173 ESSEVVTSSNKLSSAP--------KQSSPAAAGDKDELTAEEIMLRKREEFFRKQMKGGN 224
Query: 227 KTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPAGGNGSNIEVEAADHGESMM 285
K V+K P+ +K+ K+ RVW +K LD++ A S + + D
Sbjct: 225 K----VNKSPKPEAQKEKGKQPRVWVPGASNNKELDYSKAAPKGSSEVPIPIDDLATLQY 280
Query: 286 DKEEVFSS--DSESEEDEEVGKHNKPDAKKT---------------GWFSSMFQSIAGKA 328
E + + D E + E + P K G M + + G
Sbjct: 281 SSESMQGNPPDLECDSSSEEEEEELPTIKAKAAPAATKSSSKKSSFGGMFGMLKGLVGAK 340
Query: 329 NLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVF 388
+L D+EP L+ +KD L + M V+ L+ + I
Sbjct: 341 SLTMEDMEPVLEKMKDHL----IGNMSGESVQFLSGFPQMQI------------------ 378
Query: 389 VGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------- 437
++WL+++ SV++AACDTFR+GAVEQLRTH +RL
Sbjct: 379 ---------------SFWLIENGFSVLIAACDTFRAGAVEQLRTHTQRLNSRHPPEKHKG 423
Query: 438 --QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
V ++EKGY KD A +A EAI A DVVLVDTAGRMQDN PLM AL+KLI +N
Sbjct: 424 RTMVQLYEKGYGKDAAGIAMEAISYARNQAFDVVLVDTAGRMQDNAPLMTALAKLIAVNV 483
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PDLVLFVGEALVGN+AVDQL KFN+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM
Sbjct: 484 PDLVLFVGEALVGNEAVDQLVKFNKALADYSMADKPRLIDGIVLTKFDTIDDKVGAAISM 543
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
Y++G P++FVG GQ+Y DL+ LN K++V L+K
Sbjct: 544 TYITGQPIVFVGTGQTYCDLRLLNAKAVVAALMK 577
>gi|342186080|emb|CCC95565.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 579
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 312/629 (49%), Gaps = 92/629 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ L I + GG +LW + + + S I+ +I+ LE+R G+ +++ Y L
Sbjct: 1 MIDTLSIISNGGFVLWE-QSIDVTGRCSMINHVIQEFFLEDRVGM----HEAVVGEYKLH 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT----DYSDFDEMFRQL 116
W F N+ VA++ + + + L + + F + Y ++ DY DF + +
Sbjct: 56 WMFENDARFYVVAIHPKFVSYPLISTFLRTIVRKFLKKYGRVQSGCFLDY-DFSAEYAEA 114
Query: 117 RKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS---ANDDGDSDNM 173
+ +A + S+ G RG N GS +ND D D
Sbjct: 115 LRCLDAGIADCNVSE-------------------GRNRGDNEDSEGSDEVSNDSADEDTK 155
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
+ G E ++GV G + G + KG K T T +
Sbjct: 156 GTDEPAAG----------EGGISGVQLGANTFVTKSG-------HTIARKGRKLTGTKSA 198
Query: 234 KGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGG-NGSNIEVEAADHGESMMDKEEVFS 292
K++ + R WD+ +S ++ GG +EV+ A + + +
Sbjct: 199 TSPTQKRNKQVKRATR-WDEPSIDSAVEEQRRQGGPTEEELEVQTAIQRAAFIKRLPNGH 257
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
E++ E ++ G ++ +S G+ LD D + L+++L+ KNVA
Sbjct: 258 VAPVQEKEWE--------GQQRGLLANWLRSYVGRRELDSQDFNNVIPNLREKLIEKNVA 309
Query: 353 --------------------------------AMEEALVRILTPRRSIDILRDVHAAKEQ 380
AM AL RIL P+ I+ILR V +++ +
Sbjct: 310 VEVAEHVCKSVETSLAGKVLGTFESLHHCIENAMVSALHRILQPKHEINILRAVASSRSR 369
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KPY +V GVNGVGKST LAK+ YWL Q+ SV++AA DTFR GAVEQL H R L V
Sbjct: 370 NKPYSIVLCGVNGVGKSTTLAKITYWLQQNGRSVIIAAGDTFRHGAVEQLEVHGRCLGVD 429
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F+ GY DP+ VA AI A+R+ DVV++DTAGRMQD+E MRAL+KLI+ N PDLVL
Sbjct: 430 VFQMGYGTDPSAVAAAAIMRASRDRHDVVMIDTAGRMQDHESRMRALAKLIHDNQPDLVL 489
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
FVGEALVGN VDQL +FNQ L D + P+ IDGI+LTKFDTIDDKVGAA+SMVY
Sbjct: 490 FVGEALVGNSGVDQLRRFNQCLVDFAPVGTTPRGIDGIVLTKFDTIDDKVGAAISMVYEL 549
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++FVG GQ+Y DLK + +V L+
Sbjct: 550 GQPIVFVGSGQTYQDLKVMEPDVVVSALM 578
>gi|124514042|ref|XP_001350377.1| signal recognition particle receptor alpha subunit, putative
[Plasmodium falciparum 3D7]
gi|23615794|emb|CAD52786.1| signal recognition particle receptor alpha subunit, putative
[Plasmodium falciparum 3D7]
Length = 576
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/304 (51%), Positives = 204/304 (67%), Gaps = 35/304 (11%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
S+F+ + + +++ D+E L +K++L++KNVA
Sbjct: 272 SLFKMFSYNSKIEEEDIEKILHEIKNKLLSKNVAIGICDTLIDRMKENLIGKKKTLFALN 331
Query: 353 -------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
+ E + IL P+ S+D+LR +K K Y +VF+GVNGVGKSTNLAKV Y
Sbjct: 332 VKKTVSNVLSETIQSILIPKDSVDVLRSAIESKSMGKLYSIVFLGVNGVGKSTNLAKVCY 391
Query: 406 WLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
+L + +M+AACDTFR+GAVEQLR HA L V ++EKGY KD + +AKEAI A +
Sbjct: 392 YLKNKGNLKIMIAACDTFRAGAVEQLRIHANCLNVFLYEKGYGKDASAIAKEAILYAKKE 451
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DV+L+DTAGRMQDNEPLMR+L KLI NNPDL+LFVGEALVGNDA+DQL KFNQ L D
Sbjct: 452 NYDVILIDTAGRMQDNEPLMRSLGKLILYNNPDLILFVGEALVGNDAIDQLKKFNQALTD 511
Query: 525 LS-SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
+ +S N + IDGI+LTKFDT+DDKVG ALSMVY++G P++FVG GQ YT LKK NV +
Sbjct: 512 ATCNSTNKRTIDGIILTKFDTVDDKVGTALSMVYLTGKPIVFVGVGQKYTHLKKFNVNMV 571
Query: 584 VKTL 587
VK L
Sbjct: 572 VKAL 575
>gi|67624007|ref|XP_668286.1| signal recognition particle receptor alpha subunit [Cryptosporidium
hominis TU502]
gi|54659474|gb|EAL38049.1| signal recognition particle receptor alpha subunit [Cryptosporidium
hominis]
Length = 548
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 222/638 (34%), Positives = 315/638 (49%), Gaps = 139/638 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKE--------LGNALKGSPIDTLIRSCLLEERSGLASFNYDS 52
M++ +F + GL+LW+ + L L+G L+ LEER L YD
Sbjct: 1 MIDAFFVFNKTGLVLWSYRSEDAGPEEILEQVLQG-----LVEHIFLEER--LTQKYYDQ 53
Query: 53 AGAAYTLKWTFHNELGLVFVAVYQRILHLL----YVDDLLAMMKQSFSEIYDPKRTDYSD 108
Y + W+ NE ++ VYQ + Y + LL M ++ +I D
Sbjct: 54 G--PYRVNWSTINEHQIILAIVYQNAYSAVSSSTYFETLLTMARKKIIKIITENLNSVED 111
Query: 109 FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFER--GSNRSGGGSAND 166
D F R + + N +KK G + F+ N + D
Sbjct: 112 -DTYFEGFRDQFVEMIDFC--------DTNLMKKGGSKADLSSFDSLDEKNSYSKSKSYD 162
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGK 226
D D+ E+T+S SK +K+ + G
Sbjct: 163 DKTKDS------------------------------EDTNSQ-----TSKFKKVSRQWGN 187
Query: 227 KTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMD 286
+ K+TKKN LD++ +G + E + S +
Sbjct: 188 Q---------------KVTKKNM--------EMLDYSKRSGNS------EESQSKLSFYE 218
Query: 287 KEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
+ E SD +E EE+ + K + + + S+ F + L +E L+ LK +L
Sbjct: 219 RNEDEVSD---DEMEEINQEKKAVSYWSNFLSTQFGILNNNTTLTAEMVEKPLQKLKSQL 275
Query: 347 MTKNVAA---------------------------------MEEALVRILTPRRSIDILRD 373
+ KNVA+ + +A+ +IL+P++ D+L D
Sbjct: 276 VEKNVASEIAQDIIDSVSNALVGVKTQGGFSKLDTILLNSLRDAITKILSPKKPTDVLSD 335
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK--VSVMMAACDTFRSGAVEQLR 431
AK+ + Y +VF+GVNGVGKSTNLAKV Y LL++K ++V++ ACDTFR+GA+EQL+
Sbjct: 336 ALKAKQHSQVYSIVFLGVNGVGKSTNLAKVCY-LLKNKGNLNVLIVACDTFRAGAIEQLK 394
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
THA L V ++EKGY KD A+VAK+AI A G DVVL+DTAGRMQDN PLM++L+KL+
Sbjct: 395 THANCLGVQLYEKGYGKDAAMVAKDAISYAKDKGFDVVLIDTAGRMQDNVPLMKSLAKLV 454
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
+NNP+LVLFVGEALVGNDAV QL FN+ L + P IDGI+LTKFDT+DDKVGA
Sbjct: 455 QVNNPNLVLFVGEALVGNDAVHQLQVFNKYLVEFGDRP----IDGIILTKFDTVDDKVGA 510
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSMVY +G PV+FVG GQ Y +LK L+V S+V LLK
Sbjct: 511 ALSMVYTTGQPVVFVGTGQKYFNLKTLSVPSVVNALLK 548
>gi|321253682|ref|XP_003192816.1| signal recognition particle binding protein [Cryptococcus gattii
WM276]
gi|317459285|gb|ADV21029.1| signal recognition particle binding protein, putative [Cryptococcus
gattii WM276]
Length = 671
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/343 (47%), Positives = 212/343 (61%), Gaps = 64/343 (18%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
DA +SSMF + G L + DL P L ++ LM+KNVA
Sbjct: 328 DASNQSSWSSMFSRLTGSKILTQNDLAPVLVEMEKHLMSKNVAKNIAEKLCDSVGAALVG 387
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVHAAKEQR--------------KP 383
+ +L R+LTP+ S DIL ++ + P
Sbjct: 388 KKLGGLSSVKSEVQSVLSTSLTRVLTPKTSTDILLEIQRKRSSHLATLGTTSSPDSGPDP 447
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------ 437
Y + FVGVNGVGKSTNL+KV +WLLQ+ + V++AACDTFRSGAVEQLR H R L
Sbjct: 448 YTLTFVGVNGVGKSTNLSKVCFWLLQNGLKVLIAACDTFRSGAVEQLRVHVRNLGALGEE 507
Query: 438 -------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL 490
++ +FE+GY KD A +AK+AI A + DVVL+DTAGRMQDNEPLMRAL+KL
Sbjct: 508 MGQGKGKRIELFERGYGKDAAGIAKDAIAYAKEHAFDVVLIDTAGRMQDNEPLMRALAKL 567
Query: 491 IYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS-----PNPQLIDGILLTKFDTI 545
+ +NNPD ++FVGEALVGN+AVDQL+KF++ L D S + + IDGI+LTKFDTI
Sbjct: 568 VTVNNPDKIVFVGEALVGNEAVDQLTKFDRALRDFSGAGVGGVARKRGIDGIILTKFDTI 627
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DDKVGAALSM Y++G P++FVGCGQ+YTDL++L V IV+ LL
Sbjct: 628 DDKVGAALSMTYITGQPILFVGCGQTYTDLRQLRVNHIVQALL 670
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 1 MLEQLLIFTRGGLILW------TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ + I + GL+LW T + L N SPI+ L++S +E G A N + G
Sbjct: 1 MLDHISISHQSGLVLWSRAFTPTFETLANT-PNSPINALVKSAFIE---GKAMANGEEQG 56
Query: 55 A---AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
Y+++W+ N LGLVFV V+ +L L YV LL K F ++ P
Sbjct: 57 LEKDGYSVRWSVDNGLGLVFVVVFPALLPLAYVPALLERTKTLFLALFQP 106
>gi|82594110|ref|XP_725288.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23480234|gb|EAA16853.1| similar to RIKEN cDNA 1300011P19 gene [Plasmodium yoelii yoelii]
Length = 524
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 156/303 (51%), Positives = 205/303 (67%), Gaps = 34/303 (11%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------MEEALV---------- 359
S+ + + +++ D+E L+ +K +L++KNVA+ M+E L+
Sbjct: 221 SILKIFSSTNTIEEGDIEKILQDIKTKLLSKNVASEICDILIETMKEKLIGKKKTMFSLN 280
Query: 360 --------------RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
IL P+ S+D+LR AK K Y + F+GVNGVGKSTNLAKV Y
Sbjct: 281 VKKTVSTIFSDTLQSILIPKDSVDVLRSALEAKSLGKLYSICFLGVNGVGKSTNLAKVCY 340
Query: 406 WL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
+L + + +M+AACDTFR+GA+EQLR HA+ L V +FEKGY K+ A +AK+AI A +
Sbjct: 341 YLKTKGNLKIMIAACDTFRAGAIEQLRIHAKCLDVYLFEKGYGKNAAGIAKDAISYAKKE 400
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DV+L+DTAGRMQDNEPLMR+L KLI +NNPDL+LFVGEALVGNDA+DQL KFNQ L D
Sbjct: 401 KYDVILIDTAGRMQDNEPLMRSLGKLILINNPDLILFVGEALVGNDAIDQLKKFNQTLID 460
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ + + IDGI+LTKFDT+DDKVG ALSMVY++G P++FVG GQ YT LKK NV +V
Sbjct: 461 ATCDTHKRTIDGIVLTKFDTVDDKVGTALSMVYLTGKPIVFVGVGQKYTHLKKFNVNMVV 520
Query: 585 KTL 587
K L
Sbjct: 521 KAL 523
>gi|156088505|ref|XP_001611659.1| SRP54-type protein, GTPase domain containing protein [Babesia
bovis]
gi|154798913|gb|EDO08091.1| SRP54-type protein, GTPase domain containing protein [Babesia
bovis]
Length = 566
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 230/638 (36%), Positives = 326/638 (51%), Gaps = 121/638 (18%)
Query: 1 MLEQLLIFTRGGLILWTCK-----ELGNALKG-SPIDTLIRSCLLEERSGLASFNYDSAG 54
M++ + +RGG++LW+ + GN G + ++ LI +LEER N ++
Sbjct: 1 MIDFACVVSRGGVVLWSQTFDHGFQQGNKQNGRNTVNKLIEDVILEERGA----NQQASV 56
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFR 114
L+W R++H +D ++ ++ Q + DE
Sbjct: 57 DGLNLRW---------------RVMH--SIDAVMYIIYQGIQ--------NSQCLDEF-- 89
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
L A+ + +KK + +N + + G F + G +
Sbjct: 90 -LETAAQRFVKRVKKHHESITNINWITDELGFEYDSEFAEMLYKIGSKTVLS-------- 140
Query: 175 GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSK 234
V + E +S+ T V K+ SSN K +KLR + G K VVSK
Sbjct: 141 --------QPVSSQEQAQSKGTTV---KKQDSSN-------KHEKLRREWGFKE--VVSK 180
Query: 235 --------GSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMD 286
++ +PK KIT+ + +P + K G GS ++ + +
Sbjct: 181 KDIDALDYSTDKEPKVKITEPDVTSTITPEDHK------PKGFGSLLDGARNTLSKLFLR 234
Query: 287 KEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
K+ ++ ES+ E ++P T FS M AG L +E LK LK L
Sbjct: 235 KK----NEVESKVKEADNTPSRPSVLDT--FSQMVLKYAGNMVLTPEVIEEPLKELKLNL 288
Query: 347 MTKNVA--------------------------------AMEEALVRILTPRRSIDILRDV 374
TKNVA A+E+A+ RILTP+ I++LR+V
Sbjct: 289 NTKNVANDISTMICDSISAGLVGKKTASLKSVSATVREALEDAVRRILTPKEPINLLRNV 348
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
AK + + Y V+F+GVNGVGKST+LAKV Y L + VM+ ACDTFRSGAVEQL+ HA
Sbjct: 349 SEAKARGEVYSVLFLGVNGVGKSTSLAKVTYLLKCNGFKVMLIACDTFRSGAVEQLKIHA 408
Query: 435 RRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
+L V +FE+GY KDP+ + +E ++ A N D VL+DTAGRMQDNEPLM AL+KLI++N
Sbjct: 409 DKLGVELFERGYGKDPSAICREGLKHARANSYDAVLIDTAGRMQDNEPLMTALAKLIHVN 468
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFN---QKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
NP L+LFVGEALVGNDAVDQL KFN QK+ D S + IDGI+LTKFDT+DDKVGA
Sbjct: 469 NPHLLLFVGEALVGNDAVDQLRKFNQAIQKMGDSSDELRGRKIDGIVLTKFDTVDDKVGA 528
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSM Y++G PV+FVG GQ+YT+L KL + +V+ L K
Sbjct: 529 ALSMCYITGQPVVFVGTGQTYTNLAKLEIDDVVRALTK 566
>gi|409046139|gb|EKM55619.1| hypothetical protein PHACADRAFT_121298 [Phanerochaete carnosa
HHB-10118-sp]
Length = 681
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 162/338 (47%), Positives = 214/338 (63%), Gaps = 64/338 (18%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S+F I G L +ADL P L+ +K LM KNVA
Sbjct: 342 GALGSLFSRITGSKTLTQADLAPVLEGMKQHLMKKNVAKEIAEKVVESVGEDLIGRRITG 401
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAAKEQ------------RKPYVVVFVG 390
A+ AL RILTP+ S D+L + + ++PY +VFVG
Sbjct: 402 WGGTNTAVRNALSTALTRILTPKTSTDLLLSIRTKLSESQSSMVGGQTGKKEPYSIVFVG 461
Query: 391 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------------- 437
VNGVGKSTNL+KV +WL+Q+ + V++AACDTFRSGAVEQLR H R L
Sbjct: 462 VNGVGKSTNLSKVCFWLVQNGMRVLIAACDTFRSGAVEQLRVHVRNLSMLGVNGATDSKG 521
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+V ++EKGY KD A +AKE+I A + DVVL+DTAGRMQDNEPLMRAL+KL+ N+PD
Sbjct: 522 RVELYEKGYGKDAAGIAKESISYAKDHDFDVVLIDTAGRMQDNEPLMRALAKLVSTNSPD 581
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSS-------SPNPQLIDGILLTKFDTIDDKVG 550
++FVGEALVGN+AVDQL+KF++ L D S+ S + IDG+++TK+DT+DDKVG
Sbjct: 582 KIIFVGEALVGNEAVDQLTKFDRALRDFSAASGYGGGSAKERGIDGMIVTKWDTVDDKVG 641
Query: 551 AALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
AALSM YV+G P++FVGCGQ+YTDL++L V ++V+ +L
Sbjct: 642 AALSMTYVTGQPIIFVGCGQTYTDLRQLRVSNVVQAIL 679
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 1 MLEQLLIFTRGGLILWT-----CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG+ILW+ A SP+ +LIR L+E RS + F D
Sbjct: 1 MLDHCSISHKGGVILWSRSFTPAASQSAASSASPVSSLIRDALIEGRSAESQFEKD---- 56
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP 101
Y LKWTF N+L L+FV YQRIL L YVDDLLA +K F +++ P
Sbjct: 57 GYALKWTFVNDLELIFVVAYQRILQLTYVDDLLAALKTLFVKVFQP 102
>gi|393236516|gb|EJD44064.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 642
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 208/330 (63%), Gaps = 56/330 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S++F G L DL P L A+K+ LM KNVA
Sbjct: 311 GALSNVFARFTGGKVLTAEDLTPVLNAMKEHLMKKNVAKEIADKVCESVGESLIGKKVSG 370
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAAKE----------QRKPYVVVFVGVN 392
A+ +L RILTP+ S D+L + A +R PY + FVGVN
Sbjct: 371 FKTVKAEVQNALSASLTRILTPKTSTDLLLSIRAKLANAAASSSADAKRTPYAITFVGVN 430
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIF 442
GVGKSTNL+KV +WL+Q+ V++AACDTFRSGAVEQLR H R L V ++
Sbjct: 431 GVGKSTNLSKVCFWLIQNGFKVLIAACDTFRSGAVEQLRVHVRNLGMLAEGEQKGSVELY 490
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E+GY KD A +AKEAI A + DVVL+DTAGRMQDNEPLMRAL+KL+ NNPD ++FV
Sbjct: 491 ERGYGKDAAGIAKEAIAYAKESAIDVVLIDTAGRMQDNEPLMRALAKLVSTNNPDKIIFV 550
Query: 503 GEALVGNDAVDQLSKFNQKLADLSS----SPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
GEALVGN+AVDQL KF++ L D SS + IDG+L+TK+DT+DDKVGAALSM YV
Sbjct: 551 GEALVGNEAVDQLQKFDRALRDFSSVGGGPGTGRGIDGMLVTKWDTVDDKVGAALSMTYV 610
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++FVGCGQ+YTDL++L V ++V+ LL
Sbjct: 611 TGQPIIFVGCGQTYTDLRQLRVGNVVQALL 640
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 1 MLEQLLIFTRGGLILWT-----CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
ML+ I +GG++LW E A SP++ L+R L++ R+ S Y+ G
Sbjct: 1 MLDHCSISHKGGVVLWQRSFTPAAETLAASAASPVNNLVREALIDSRAASDS-KYEKDG- 58
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS 107
Y +KW+F N+L L+FV YQRIL L YVDDL+A +K F ++Y+P +S
Sbjct: 59 -YAIKWSFVNDLELIFVVAYQRILQLTYVDDLIAALKALFVKLYEPFLRSFS 109
>gi|389749040|gb|EIM90217.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 683
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 212/330 (64%), Gaps = 56/330 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G SMF + G L + DL+P L+ +K LM KNVA
Sbjct: 352 GALGSMFARLTGSKVLTEEDLKPVLEGMKQHLMKKNVAMDIAEKVCEGVGESLVGKKVGG 411
Query: 353 ----------AMEEALVRILTPRRSIDILRDVH-------AAKEQRKPYVVVFVGVNGVG 395
A+ ++ RILTP S D+L + A+ +QR PY + FVGVNGVG
Sbjct: 412 FQTTSAAVRQALSNSITRILTPNTSTDLLLSIRSKLSSPLASTQQRLPYSITFVGVNGVG 471
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIF 442
KSTNL+KV +WL+Q+ + V++AACDTFRSGAVEQLR H R L +V ++
Sbjct: 472 KSTNLSKVCFWLIQNGLRVLIAACDTFRSGAVEQLRVHVRNLSMLGVNGATDSKGRVELY 531
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E+GY KD A +A+EAI N DVVL+DTAGRMQDNEPLMRAL+KL+ +NNPD V+FV
Sbjct: 532 ERGYGKDAAGIAREAIAYGRDNDFDVVLIDTAGRMQDNEPLMRALAKLVSVNNPDKVIFV 591
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQL----IDGILLTKFDTIDDKVGAALSMVYV 558
GEALVGN+AVDQLSKF++ L D SS+ IDG+L+TK+DT+DDKVGAALSM YV
Sbjct: 592 GEALVGNEAVDQLSKFDRSLKDFSSASGGAGSGRGIDGMLVTKWDTVDDKVGAALSMTYV 651
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++FVG GQ+YTDL++L V ++V+ +L
Sbjct: 652 TGQPIIFVGTGQTYTDLRQLRVANVVQAIL 681
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
Query: 1 MLEQLLIFTRGGLILWT------CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG 54
ML+ I +GG++LW+ +L ++ SP+++LIR L+E R+ + D
Sbjct: 1 MLDHCSISHKGGVVLWSRSFTPAASQLASS-PASPVNSLIRDALIEGRTTGDKYEKD--- 56
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY 106
Y ++WTF N+L L+FV YQRIL L YVDDLLA +K F +++ P T++
Sbjct: 57 -GYAVRWTFVNDLELIFVVAYQRILQLTYVDDLLAALKTLFVKLFQPFLTNF 107
>gi|66361764|ref|XP_627404.1| Srp101p GTpase. signal recognition particle receptor alpha subunit
[Cryptosporidium parvum Iowa II]
gi|46228777|gb|EAK89647.1| Srp101p GTpase, signal recognition particle receptor alpha subunit
[Cryptosporidium parvum Iowa II]
Length = 548
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/407 (44%), Positives = 246/407 (60%), Gaps = 60/407 (14%)
Query: 221 RNKGGKKTDTVVSK---GSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEA 277
+NK + T++ SK S +K+TKKN LD++ +G + E
Sbjct: 164 KNKDSEDTNSQTSKFKKASRQWGNQKVTKKNM--------EMLDYSKRSGNS------EE 209
Query: 278 ADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEP 337
+ S ++ E SD +E EE+ + K + + + SS F + L +E
Sbjct: 210 SQSKLSFYERNEDEVSD---DEIEEINQEKKAVSYWSNFLSSQFGILNNNTTLTAEMVEK 266
Query: 338 ALKALKDRLMTKNVAA---------------------------------MEEALVRILTP 364
L+ LK +L+ KNVA+ + +A+ +IL+P
Sbjct: 267 PLQKLKSQLVEKNVASEIAQDIIDSVSNALVGVKTQGGFSKLDTILLNSLRDAITKILSP 326
Query: 365 RRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK--VSVMMAACDTF 422
++ D+L D AK+ + Y +VF+GVNGVGKSTNLAKV Y LL++K ++V++ ACDTF
Sbjct: 327 KKPTDVLSDALKAKQHSQVYSIVFLGVNGVGKSTNLAKVCY-LLKNKGNLNVLIVACDTF 385
Query: 423 RSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEP 482
R+GA+EQL+THA L V ++EKGY KD A+VAK+AI A G DVVL+DTAGRMQDN P
Sbjct: 386 RAGAIEQLKTHANCLGVQLYEKGYGKDAAMVAKDAISYAKDKGFDVVLIDTAGRMQDNVP 445
Query: 483 LMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKF 542
LM++L+KL+ +NNP+LVLFVGEALVGNDAV QL FN+ L + P IDGI+LTKF
Sbjct: 446 LMKSLAKLVQVNNPNLVLFVGEALVGNDAVHQLQVFNKYLVEFGDRP----IDGIILTKF 501
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
DT+DDKVGAALSMVY +G PV+FVG GQ Y +LK L+V S+V LLK
Sbjct: 502 DTVDDKVGAALSMVYTTGQPVVFVGTGQKYFNLKTLSVPSVVNALLK 548
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKE--------LGNALKGSPIDTLIRSCLLEERSGLASFNYDS 52
M++ +F + GL+LW+ + L L+G L+ LEER L YD
Sbjct: 1 MIDAFFVFNKTGLVLWSYRSEDAGPEEILEQVLQG-----LVEHIFLEER--LTQKYYDQ 53
Query: 53 AGAAYTLKWTFHNELGLVFVAVYQRILHLL----YVDDLLAMMKQSFSEI 98
AY + W+ NE ++ VYQ + Y + LL M ++ +I
Sbjct: 54 --GAYRVNWSTINEHQIILAIVYQNAYSAVSSGTYFETLLTMARKKIIKI 101
>gi|156055398|ref|XP_001593623.1| hypothetical protein SS1G_05051 [Sclerotinia sclerotiorum 1980]
gi|154702835|gb|EDO02574.1| hypothetical protein SS1G_05051 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 660
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 227/684 (33%), Positives = 334/684 (48%), Gaps = 123/684 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ K+ + + + I++LI + +EER+ + D AA
Sbjct: 1 MLDTFEILTTSGVVLWS-KQF-SPVSPAVINSLITNVFIEERTLPGAGVADDVSAARNPP 58
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRTDY 106
+TLKWT ELGL+FV VY+ +LHL ++D L+ +K F ++Y P T
Sbjct: 59 FKHDQHTLKWTTCKELGLIFVVVYRSLLHLSWIDKLVDNVKTIFVDLYGDQLKKPHTTVV 118
Query: 107 -SDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
FDE F Q +E E N L + + FE S
Sbjct: 119 ECPFDEYFDQQVRELEK---------------NALNQDARVAEASAFEETIPLV---STT 160
Query: 166 DDGDSDNMRGRKLENGHS--NVGNVEIEESRVTGVANGKENT-SSNIGAFDVSKLQKLRN 222
D ++ + G L G S NV ++ E G N + +T +S+I + K+
Sbjct: 161 SDDEAPPLPG-SLSRGQSKNNVKDLPSPELTPLGTPNSRPSTPASHILSAKAGPGGKVSR 219
Query: 223 KGGKKTDTVVSKGSNPDPKKKI------TKKNRVWD-----DSPPESKLDFTDPAGGNGS 271
+ K T S + KKI KK R WD D ++ LD++ PA G S
Sbjct: 220 RARKAAQTPTYASSGDESHKKIRNAKARLKKGRKWDAEGMVDEDSDTPLDYSAPANGATS 279
Query: 272 NIE---------VEAADHGES-------MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTG 315
+ VE G + D E+ S +S ++ P +
Sbjct: 280 GEDEGRPGAVEGVEQTSWGSKTGKGQFVLKDLEDEVHSILDSANAKKAVSTTSPTSLVGS 339
Query: 316 WFSS---MFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------- 352
FS+ +F+++ G L K DL+ A+K ++D L+ KNVA
Sbjct: 340 SFSAIGGLFRNVVGGKTLTKEDLDKAMKGMEDHLLRKNVAREAAMRLCEGVERELIGVKT 399
Query: 353 ------------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNG 393
AME +L +ILTP S+D+LR++ A + ++++PYV+ VGVNG
Sbjct: 400 GSFESVQARIATAMESSLRKILTPTSSLDLLREIDAVVSPPALSLKKKRPYVMSIVGVNG 459
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEK 444
VGKSTNL+K+ Y+LLQ+K V++ ACDTFRSGAVEQL H R L QV +++K
Sbjct: 460 VGKSTNLSKICYFLLQNKYKVLVVACDTFRSGAVEQLAVHVRNLKELTAREGGQVELYQK 519
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A VAK+++ A + G DVVL+DTAGR +++ LM +L K PD +L VGE
Sbjct: 520 GYGKDAANVAKDSVSFAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGE 579
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVG D+V Q FN S +DG +++K DT+ D VG +SMV+ + PV+
Sbjct: 580 ALVGTDSVAQARNFNAAFGQGRS------LDGFIISKCDTVGDMVGTLVSMVHATNVPVL 633
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
FVG GQ Y+DL+ L+VK V+ L+
Sbjct: 634 FVGVGQHYSDLRNLSVKWAVEKLM 657
>gi|308799976|ref|XP_003074769.1| SrrA undefined product (IC) [Ostreococcus tauri]
gi|116061309|emb|CAL52027.1| SrrA undefined product (IC) [Ostreococcus tauri]
Length = 502
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/245 (56%), Positives = 188/245 (76%), Gaps = 2/245 (0%)
Query: 344 DRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKV 403
+ +MT ++EEA++R+L+ R +DIL D++ + R PYV+ FVGVNGVGKST+L+K+
Sbjct: 258 ESVMTIIHRSLEEAVIRVLSSARKVDILHDINRVGKSR-PYVITFVGVNGVGKSTSLSKL 316
Query: 404 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATR 463
YWL Q SVM+AACDTFR+GAVEQLRTH RL ++E+GYE+DP+ +A++AIQ+ATR
Sbjct: 317 VYWLTQQNFSVMVAACDTFRAGAVEQLRTHCHRLGCALYERGYERDPSTIAQQAIQQATR 376
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
DVV++DTAGRMQDNEPLMR+L+KL+ +N PD FVG+ALVGND V Q+ +F ++L
Sbjct: 377 QNIDVVMIDTAGRMQDNEPLMRSLAKLLNVNKPDFTFFVGDALVGNDGVSQILQFERRLQ 436
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
+L+ +IDGI LTKFDTID+KVGAALS+V+ S PV+FVG GQ+Y DL++ + I
Sbjct: 437 ELTELSGG-VIDGIFLTKFDTIDEKVGAALSLVHASAIPVLFVGTGQTYGDLRRFQAEYI 495
Query: 584 VKTLL 588
+ LL
Sbjct: 496 AEALL 500
>gi|221057428|ref|XP_002261222.1| signal recognition particle receptor alpha subunit [Plasmodium
knowlesi strain H]
gi|194247227|emb|CAQ40627.1| signal recognition particle receptor alpha subunit, putative
[Plasmodium knowlesi strain H]
Length = 595
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/303 (52%), Positives = 206/303 (67%), Gaps = 34/303 (11%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------------- 353
S+ + + + +++ D+E L+ +K++L++KNVAA
Sbjct: 292 SILKVFSYNSKIEENDIESILQGVKNKLLSKNVAAGICDTLIEKMKGNLIGKKKTLFSMN 351
Query: 354 --------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
+ + + IL P+ S+DILR AK K Y +VF+GVNGVGKSTNLAKV Y
Sbjct: 352 VKKTVSTVLSDTIQSILIPKESVDILRAALEAKSIGKLYSIVFLGVNGVGKSTNLAKVCY 411
Query: 406 WL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
+L + + +M+AACDTFR+GAVEQLRTHA L V ++EKGY KD A +AKEAI A +
Sbjct: 412 YLKTKGNLKIMIAACDTFRAGAVEQLRTHANCLDVFLYEKGYGKDAAAIAKEAIAYAKKE 471
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
+V+L+DTAGRMQDNEPLMR+L KLI +NNPD +LFVGEALVGNDA+DQL KFNQ L D
Sbjct: 472 NFNVILIDTAGRMQDNEPLMRSLGKLILINNPDFILFVGEALVGNDAIDQLKKFNQALTD 531
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ + N + IDGILLTKFDT+DDKVG ALSMVY++G P++FVG GQ YT LKK NV +V
Sbjct: 532 ATCNSNKRTIDGILLTKFDTVDDKVGTALSMVYLTGKPIVFVGIGQKYTHLKKFNVSMVV 591
Query: 585 KTL 587
K L
Sbjct: 592 KAL 594
>gi|154302571|ref|XP_001551695.1| hypothetical protein BC1G_09862 [Botryotinia fuckeliana B05.10]
gi|347827501|emb|CCD43198.1| similar to signal recognition particle receptor subunit alpha
[Botryotinia fuckeliana]
Length = 660
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 227/683 (33%), Positives = 337/683 (49%), Gaps = 121/683 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ K+ + + + I++LI + +EER+ + D AA
Sbjct: 1 MLDTFEILTTSGVVLWS-KQF-SPVSPAIINSLITNVFIEERTLPGAGVADDISAASNPP 58
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSD-- 108
+TLKWT ELGL+FV VY+ +LHL ++D L+ +K F ++Y D R ++
Sbjct: 59 FKHDQHTLKWTTCKELGLIFVVVYRSLLHLSWIDKLVDNVKTIFVDLYGDQLRKPHTTVV 118
Query: 109 ---FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
FDE F Q +E E A L + + FE S N
Sbjct: 119 ECPFDEYFDQQVRELEKSA---------------LNQDARVAEASAFEESIPLISTTSDN 163
Query: 166 DDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENT-SSNIGAFDVSKLQKL--RN 222
+ + R +NV + ES G N + +T +S+I + K+ R
Sbjct: 164 EPPPMPGLPSRG--QSKNNVKDTPSPESTPLGTPNSRPSTPASHILSAKAGPGGKVSRRA 221
Query: 223 KGGKKTDTVVSKGSNPDPKKKITK----KNRVWD-----DSPPESKLDFTDPAGGNGSNI 273
+ +T T S G K + K K R WD D ++ LD++ PA G S
Sbjct: 222 RKAAQTPTYTSSGDESHRKSRSVKTGPKKGRKWDADGMADEDSDTPLDYSAPANGATSG- 280
Query: 274 EVEAADHGESMMDKEEVFSSDSESE------EDEEVGKHNKPDAKKT-----------GW 316
E EA G +++ S + + EDE + +AKK
Sbjct: 281 EDEARPGGVEGVEQTSWGSKTGKGQFVLKDLEDEVHSILDSANAKKAESSAPAAGLVGSS 340
Query: 317 FSS---MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
FS+ +F+++ G L K DL+ A+K ++D L+ KNVA
Sbjct: 341 FSAIGGLFRNVVGGKTLTKEDLDKAMKGMEDHLLRKNVAREAAMRLCEGVERELIGVKTG 400
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGV 394
AME +L +ILTP S+D+LR++ + + ++++PYV+ VGVNGV
Sbjct: 401 NFESVQTRIATAMEASLRKILTPTSSLDLLREIDSIVSPPALSLKKKRPYVMSIVGVNGV 460
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKG 445
GKSTNL+K+ Y+LLQ+K V++ ACDTFRSGAVEQL H R L QV +++KG
Sbjct: 461 GKSTNLSKICYFLLQNKYKVLVVACDTFRSGAVEQLAVHVRNLKELTTREGGQVELYQKG 520
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
Y KD A VAK+++ A + G DVVL+DTAGR +++ LM +L K PD +L VGEA
Sbjct: 521 YGKDAANVAKDSVSFAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEA 580
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
LVG D+V Q FN S +DG +++K DT+ D VG +SMV+ + PV+F
Sbjct: 581 LVGTDSVAQARNFNAAFGQGRS------LDGFIISKCDTVGDMVGTLVSMVHATNVPVLF 634
Query: 566 VGCGQSYTDLKKLNVKSIVKTLL 588
VG GQ Y+DL+ L+VK V+ L+
Sbjct: 635 VGVGQHYSDLRNLSVKWAVEKLM 657
>gi|375152086|gb|AFA36501.1| putative signal recognition particle receptor, partial [Lolium
perenne]
Length = 158
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/158 (91%), Positives = 152/158 (96%)
Query: 432 THARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
THARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN SDVVLVDTAGRMQDNEPLMRALSKLI
Sbjct: 1 THARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLI 60
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGA 551
LN PDLVLFVGEALVGNDAVDQL+KFNQKLADLS+ P +LIDGILLTKFDTIDDKVGA
Sbjct: 61 NLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGA 120
Query: 552 ALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ALSMVY+SG+PVMFVGCGQSYTDLKKLNVKSIVKTLLK
Sbjct: 121 ALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 158
>gi|156101509|ref|XP_001616448.1| signal recognition particle receptor [Plasmodium vivax Sal-1]
gi|148805322|gb|EDL46721.1| signal recognition particle receptor, putative [Plasmodium vivax]
Length = 602
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/303 (52%), Positives = 205/303 (67%), Gaps = 34/303 (11%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------------------- 353
S+ + + + +++ D+E L+ +K++L++KNVA
Sbjct: 299 SILKVFSYNSKIEENDIESVLQGVKNKLLSKNVAVGICDMLIEKMKGNLIGKKKTLFSMN 358
Query: 354 --------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
+ E + IL P++S+D+LR AK K Y +VF+GVNGVGKSTNLAKV Y
Sbjct: 359 VKKTVSTVLSETIQSILIPKQSVDVLRAALEAKSIGKLYSIVFLGVNGVGKSTNLAKVCY 418
Query: 406 WL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
+L + + +M+AACDTFR+GAVEQLRTHA L V ++EKGY KD A +AKEAI A +
Sbjct: 419 YLKTKGNLKIMIAACDTFRAGAVEQLRTHANCLDVFLYEKGYGKDAAAIAKEAIAYAKKE 478
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
V+L+DTAGRMQDNEPLMR+L KLI +NNPD +LFVGEALVGNDA+DQL KFNQ L D
Sbjct: 479 NFHVILIDTAGRMQDNEPLMRSLGKLILINNPDFILFVGEALVGNDAIDQLKKFNQALTD 538
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ + N + IDGILLTKFDT+DDKVG ALSMVY++G P++FVG GQ YT LKK NV +V
Sbjct: 539 ATCNGNKRTIDGILLTKFDTVDDKVGTALSMVYLTGKPIVFVGIGQKYTHLKKFNVSMVV 598
Query: 585 KTL 587
K L
Sbjct: 599 KAL 601
>gi|209882278|ref|XP_002142576.1| signal recognition particle receptor subunit alpha [Cryptosporidium
muris RN66]
gi|209558182|gb|EEA08227.1| signal recognition particle receptor subunit alpha, putative
[Cryptosporidium muris RN66]
Length = 519
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 166/382 (43%), Positives = 226/382 (59%), Gaps = 56/382 (14%)
Query: 246 KKNRVWDDSPPESK----LDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDE 301
KK R W+ K LD++ GN E K E + +SES+E E
Sbjct: 156 KKERQWNHQKITKKAMEQLDYSLKNNGN------------EIKTKKLEFYQGESESDEFE 203
Query: 302 EVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------- 352
E N + W ++ F + + K + L+ LK RL+ KNVA
Sbjct: 204 E--NINTKKSFWNNWITNNFGILQNNTIITKDIIYNPLQDLKSRLIGKNVAPEIAEDIIQ 261
Query: 353 ------------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVF 388
+ + + RIL+P+R ID+L + AK + Y +VF
Sbjct: 262 SINKTLIGVKVQGGFTKLNTILDNCLRDTITRILSPKRIIDVLNEAIDAKRHGQIYSIVF 321
Query: 389 VGVNGVGKSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
+GVNGVGKSTNLAKV Y+L + VM+ ACDTFR+GA+EQL+THA L V ++E+GY
Sbjct: 322 LGVNGVGKSTNLAKVCYYLKNKGNLKVMIVACDTFRAGAIEQLKTHANCLDVYLYERGYG 381
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
KD A +AK+AI A N D+VL+DTAGRMQDN PLM++L+KL+ +NNP+LV+FVGEALV
Sbjct: 382 KDAAFIAKDAILYAKENKYDIVLIDTAGRMQDNVPLMKSLAKLVMINNPNLVIFVGEALV 441
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GNDAV+QL FN+ L D ++ P IDGILLTKFDT+DDK+GAALSMVY +G P++F+G
Sbjct: 442 GNDAVNQLQTFNKFLIDHANRP----IDGILLTKFDTVDDKIGAALSMVYSTGQPIIFIG 497
Query: 568 CGQSYTDLKKLNVKSIVKTLLK 589
GQ Y +L+ L V ++V ++ K
Sbjct: 498 TGQKYFNLRTLPVSTVVNSIFK 519
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGN-----ALKGSPIDTLIRSCLLEERSGLASFNYDSAGA 55
M+++ IF +GGLILW+ K GN L ++ LI+ LE+R L + YD
Sbjct: 1 MIDEFFIFNKGGLILWSYK--GNNENKFTLYLEILNKLIQEVFLEDRLSLKYYEYD---- 54
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLL---YVDDLLAMMKQSFSEIYDPKRTDYSDFD-- 110
Y + WT N+ L+ V +YQ I + Y+D +L M K+ +I + T+Y++ D
Sbjct: 55 IYRVNWTILNDRDLILVVIYQGIYCYISSSYIDKILTMSKKQILKILN---TNYNNHDNH 111
Query: 111 EMFRQLRKEAE-----ARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNR 158
E F R + + + + KSK + + NN + KG ER N
Sbjct: 112 EYFELFRSKFDEIIYFCDLQYMTKSKSLDES-NNYELNKNISNKGKKERQWNH 163
>gi|443895191|dbj|GAC72537.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 703
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 204/335 (60%), Gaps = 70/335 (20%)
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVAA------------------------------ 353
+ G L K DL PAL A+ L +KNVAA
Sbjct: 369 LTGAKTLTKEDLAPALSAMASHLQSKNVAADVAQRLCDSVERNLVGKNLGSFGSVKAEVK 428
Query: 354 --MEEALVRILTPRRSIDILRDVHAAKEQRK----------------------PYVVVFV 389
+EEA+ RILTP+ S DIL ++ A K QR PY + FV
Sbjct: 429 KALEEAITRILTPKSSTDILLEI-ATKRQRSAAASSLALATSAKDKELASKPDPYSICFV 487
Query: 390 GVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------------ 437
GVNGVGKSTNLAKV +WLLQ+++ V++AACDTFR+GAVEQLR H R L
Sbjct: 488 GVNGVGKSTNLAKVCFWLLQNRMRVLIAACDTFRAGAVEQLRVHVRNLGQLRVDGIALEE 547
Query: 438 ---QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
++ ++E+GY KD A +AK+A+ A G DVVL+DTAGRMQDNEPLMRAL+KL+ +N
Sbjct: 548 QKGRIELYERGYGKDAAGIAKDALSYAKAEGFDVVLIDTAGRMQDNEPLMRALAKLVAVN 607
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
PD ++FVGEALVGN+AVDQ++KF+ + D S NP+ +DG LLTK+DT+DDKVG AL+
Sbjct: 608 RPDKIIFVGEALVGNEAVDQITKFDGAMKDFSGVSNPRGLDGSLLTKWDTVDDKVGTALT 667
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+G P+ F+G GQ+YTDL++L V +V LLK
Sbjct: 668 TTSATGLPIYFLGTGQTYTDLRQLRVHHVVNALLK 702
>gi|256088727|ref|XP_002580477.1| signal recognition particle receptor alpha subunit (sr-alpha)
[Schistosoma mansoni]
Length = 658
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 232/692 (33%), Positives = 333/692 (48%), Gaps = 137/692 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ +I T+GG+ LW + + S I+T ++S +LEE +G + F DS +K
Sbjct: 1 MLDFFVIITKGGIRLWCFPGSIDIFRLS-INTFLKSLILEENAGRSPFVCDSRA----MK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD------YSDFDEMFR 114
+ NE L+FVA YQ +L L YVD L + F + Y + + Y +F +++
Sbjct: 56 FYMDNEFNLLFVAAYQNVLQLNYVDKFLTDIALEFRDKYKNRLVNHDITGSYDEFLPIYQ 115
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMR 174
K E +L+K + + + K + +G N +++
Sbjct: 116 ATLKRTEDEFRDLRKGAKQMRKFEDSDKSKKTVASMIVRKGKNTEV-----------DVK 164
Query: 175 GRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSK 234
+ S V ++EE V G+ ++N F KG KK+ S
Sbjct: 165 ETPIAQKESLVPESKLEELPVNGIDTFEQNRLRLAAKF----------KGSKKSKEPKSP 214
Query: 235 GSNP--DPKKKITKKNRVWDDSPP---ESKLDF-----TDPAGG-----NGSNIEVEAAD 279
+P P K K++R WD+S + LDF T+ G N S E+E
Sbjct: 215 SLSPMQKPNGKKIKESRRWDNSATGEEAAALDFSGMNHTESTGNQKSDYNFSATEIETLS 274
Query: 280 HGESMM--DKEEV------------------------FSSDSESEEDEEVGKHNKPDAKK 313
M D +EV S+DS+ ++ K K
Sbjct: 275 RLRGTMKDDLDEVNVSSGDEDVDSLELKENESVEQNGLSTDSQLQKSSLDNKQTKSGYLN 334
Query: 314 TGWFSSMFQSI-----AGKANLDKADLEPALKALKDRLMTKNVA---------------- 352
G+ SS+ + + +G+ L + D+ P L+ L++RL+ KNVA
Sbjct: 335 GGFASSLLRGLRITGGSGRV-LTREDIAPCLEQLRERLVGKNVAMSIADRVCSNVADRLV 393
Query: 353 ----------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGK 396
++EE RIL R +D+LRD A+ Q +PY +VF GVNGVGK
Sbjct: 394 GTSLGTFERIYPRVRASLEEVCSRILVSGRRVDVLRDALDARTQGRPYSIVFCGVNGVGK 453
Query: 397 STNLAKVAYWL-LQHKVSVMMAACDT-------------FRSGAVEQLRTHARRLQVPIF 442
STNLAKV + L ++ V + A + F+ + + + H PI
Sbjct: 454 STNLAKVCHLTKLLLQIFVFICAYQSCFCAKVPNTSMGRFKQTILNEFKRH------PIA 507
Query: 443 EKGYEKDPAIVAKEA----IQEATRNGS-DVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+ D A+ A EA + TR+ DVVLVDTAGRMQDNEPLMRAL+ LI N PD
Sbjct: 508 QASGRVDNAM-AFEAKGIGFECQTRDRHFDVVLVDTAGRMQDNEPLMRALASLIQTNQPD 566
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
LVLFVGEALVGN+AVDQL KFNQ LAD S S P+ IDGI+LTKFDTIDDKVGAA+SM
Sbjct: 567 LVLFVGEALVGNEAVDQLVKFNQSLADHSYSDRPRCIDGIVLTKFDTIDDKVGAAISMAC 626
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+S P++FVG GQ+Y+DL++L+V ++VK L+K
Sbjct: 627 ISNQPIVFVGTGQTYSDLRQLSVNAVVKALMK 658
>gi|429327556|gb|AFZ79316.1| signal recognition particle receptor alpha subunit, putative
[Babesia equi]
Length = 560
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 186/237 (78%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+++A+ RILTP+ I++++ + Y +VF+GVNGVGKSTNLAKVA+ L +
Sbjct: 324 ALKDAVRRILTPKEPINLMQRIRETNANGNVYSIVFLGVNGVGKSTNLAKVAHLLKSNGF 383
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+++ ACDTFRSGAVEQL+ HA++L + +FE+GY KDPA +AK+ ++ A NG +VVL+D
Sbjct: 384 KILLVACDTFRSGAVEQLKIHAQKLDIELFERGYGKDPAQIAKDGLKYANGNGFNVVLID 443
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLM AL+KLI +NNP+L+LFVGEALVGNDAVDQL KFN + + + +
Sbjct: 444 TAGRMQDNEPLMAALAKLINVNNPNLILFVGEALVGNDAVDQLQKFNHAINKMGENSINR 503
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDG++LTKFDT+DDKVG ALSMVY++G P++FVG GQ+YTDL KL+ I+K+L+K
Sbjct: 504 NIDGLILTKFDTVDDKVGTALSMVYITGRPILFVGNGQNYTDLSKLDPDMIIKSLIK 560
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSP-----IDTLIRSCLLEERSGLASFNYDSAGA 55
M++ TRGGLI+W+ ++ +P I+TLIR+ ++EER G Y
Sbjct: 1 MIDSASAITRGGLIIWSYAFEDDSSNLTPNENAIINTLIRNAIIEERGG---GKYSCLDG 57
Query: 56 AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD------- 108
+ +W N L L+F Y+ I + + +LL + + F+ + + + S+
Sbjct: 58 IH-FRWNIINSLDLIFFISYKGIQNTQNLVELLDVCSERFTALVQKEIKNASNINWIELD 116
Query: 109 ----FDEMFRQL 116
FDE FR L
Sbjct: 117 KKFGFDEEFRSL 128
>gi|408390378|gb|EKJ69779.1| hypothetical protein FPSE_10027 [Fusarium pseudograminearum CS3096]
Length = 659
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 218/684 (31%), Positives = 335/684 (48%), Gaps = 124/684 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G+++W+ A+ S I+ I +EE+SG + + + +A
Sbjct: 1 MLDSFEILTTSGVVVWS--RTYTAINPSIINNFIADTFIEEKSGAIALSDSRSASANPPY 58
Query: 57 ----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-------D 105
+TLKWT ELG++FVAVY+ +LHL +VD L+ +K F ++Y + T +
Sbjct: 59 KSDQHTLKWTLVKELGIIFVAVYRSLLHLSWVDKLVDNIKTIFVKLYGEQLTKPHTTLVE 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
FDE F + + EEL ++ P + L++ R + A+
Sbjct: 119 CHAFDEYF-------DVQIEELDQT-STKVPSTTITAGAIPLEEEIIPRNT-------AD 163
Query: 166 DDGDSDNM--RGRKLENGHSNVGNVEIEESRVTGVANG-KENTSSN----IGAFDVSKLQ 218
+ + + RGR L H + +ES NG + T SN ++K+
Sbjct: 164 EPPVAPGLTYRGRHLNGPHDAL---SADESTPALTPNGSRPGTPSNHLLSAKGGPIAKIS 220
Query: 219 KLRNKGGKKTDTVVSKGSN-PDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSN 272
+ K +T S G P KK KK R WD D + +LD++ + S
Sbjct: 221 RRARKAKNQTSAPASSGDEAPRKKKTAVKKGRKWDADGFADEDDDVQLDYSKAQATSDSE 280
Query: 273 IE--------VEAADHGESMMDK----------EEVFSSDSESEEDEEVGKHNKPDAKKT 314
E +++ G + K E+ +S E+E+ E +K T
Sbjct: 281 AEGRSTALDEIDSNTWGSTSKGKFVLKDLGDEVHEILAS--EAEKAAETKSQSKSGLLGT 338
Query: 315 G--WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------- 352
G S +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 339 GVSAISGLFRNVVGGKTLTKEDLDKAMKGMEEHLLQKNVAREAAVRLCEGVEKELVGVKT 398
Query: 353 ------------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNG 393
AME +L ++LTP S+D+LR++ A + + +PYV+ VGVNG
Sbjct: 399 GSFESINARIQAAMEASLTKMLTPTSSLDLLREIDAITAPSVTSLRKPRPYVMSIVGVNG 458
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEK 444
VGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++K
Sbjct: 459 VGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGRVELYQK 518
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGE
Sbjct: 519 GYGKDAATVAKDAVSHAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGE 578
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVG D+V Q FN + + +DG +++K DT+ D VG +S+V+ + PV+
Sbjct: 579 ALVGTDSVAQARNFNAAFGAV------RTLDGFIISKCDTVGDMVGTLVSLVHATNVPVL 632
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
FVG GQ Y+DL+ +VK V+ LL
Sbjct: 633 FVGVGQHYSDLRNFSVKWAVEKLL 656
>gi|46128914|ref|XP_388961.1| hypothetical protein FG08785.1 [Gibberella zeae PH-1]
Length = 659
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 334/683 (48%), Gaps = 122/683 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G+++W+ A+ S I+ I +EE+SG + + DS A+
Sbjct: 1 MLDSFEILTTSGVVVWS--RTYTAINPSIINNFIADTFIEEKSGAIALS-DSRSASTNPP 57
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT------- 104
+TLKWT ELG++FVAVY+ +LHL +VD L+ +K F ++Y + T
Sbjct: 58 YKSDQHTLKWTLVKELGIIFVAVYRSLLHLSWVDKLVDNIKTIFVKLYGEQLTKPHTTLV 117
Query: 105 DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
+ FDE F + + EEL ++ P + L++ R G
Sbjct: 118 ECHAFDEYF-------DVQIEELDQT-STKVPSTTITAGAIPLEEEIIPRNI-----GDE 164
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANG-KENTSSN----IGAFDVSKLQK 219
RGR L NG + + +ES NG + T SN ++K+ +
Sbjct: 165 PPVAPGLTYRGRHL-NGPQDA--LSADESTPALTPNGSRPGTPSNHILSAKGGPIAKISR 221
Query: 220 LRNKGGKKTDTVVSKGSNPDPKKKIT-KKNRVWD-----DSPPESKLDFTDPAGGNGSNI 273
K +T S G KKK T KK R WD D + +LD++ + S
Sbjct: 222 RARKAKNQTSAPASSGDEAPRKKKTTAKKGRKWDADGFADEDDDVQLDYSKAQATSDSEA 281
Query: 274 E--------VEAADHGESMMDK----------EEVFSSDSESEEDEEVGKHNKPDAKKTG 315
E +++ G + K E+ +S E+E+ E +K TG
Sbjct: 282 EGRSTALDEIDSNTWGSTSKGKFVLKDLGDEVHEILAS--EAEKAAETKSQSKSGLLGTG 339
Query: 316 --WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
S +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 340 VSAISGLFRNVVGGKTLTKEDLDKAMKGMEEHLLQKNVAREAAVRLCEGVEKELVGVKTG 399
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGV 394
AME +L ++LTP S+D+LR++ A + + +PYV+ VGVNGV
Sbjct: 400 SFESINARIQAAMEASLTKMLTPTSSLDLLREIDAITAPSVTSLRKPRPYVMSIVGVNGV 459
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKG 445
GKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++KG
Sbjct: 460 GKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGRVELYQKG 519
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
Y KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEA
Sbjct: 520 YGKDAATVAKDAVSHAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEA 579
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
LVG D+V Q FN + + +DG +++K DT+ D VG +S+V+ + PV+F
Sbjct: 580 LVGTDSVAQARNFNAAFGAV------RTLDGFIISKCDTVGDMVGTLVSLVHATNVPVLF 633
Query: 566 VGCGQSYTDLKKLNVKSIVKTLL 588
VG GQ Y+DL+ +VK V+ LL
Sbjct: 634 VGVGQHYSDLRNFSVKWAVEKLL 656
>gi|342879271|gb|EGU80526.1| hypothetical protein FOXB_08986 [Fusarium oxysporum Fo5176]
Length = 662
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 220/685 (32%), Positives = 332/685 (48%), Gaps = 123/685 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G+++W+ + S I+ I +EE+SG + + DS AA
Sbjct: 1 MLDSFEILTTSGVVVWS--RTYTPINPSIINNFIADTFIEEKSGAIALS-DSRSAAVNTP 57
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT------- 104
+TLKWT ELG++FVAVY+ +LHL +VD L+ +K F ++Y + T
Sbjct: 58 YKSDQHTLKWTLVKELGVIFVAVYRSLLHLSWVDKLVDNIKTIFVKLYGEQLTKPHTTLV 117
Query: 105 DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
+ FDE F + + EEL ++ P + L++ E S G
Sbjct: 118 ECHAFDEYF-------DIQLEELDQT-STKVPSTTITAGAVPLEE---EIISGNPGDNPP 166
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAF-----DVSKLQK 219
G + RGR L NG + + +ES NG + N ++K+ +
Sbjct: 167 VAPGLT--YRGRHL-NGPQDA--LSADESTPALTPNGSRPGTPNNHLLVAKGGPIAKISR 221
Query: 220 LRNKGGKKTDTVVSKGSN-PDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSNI 273
K +T VS G P KK + KK R WD D + +LD++ A S+
Sbjct: 222 RARKAKNQTSAPVSSGDEAPRKKKAVAKKGRKWDADGFADEEDDVQLDYSAKAHAT-SDS 280
Query: 274 EVEAADHGESM--MDK--------------------EEVFSSDSESEEDEEVGKHNKPDA 311
EVEA ++ +D E+ +S++E + +
Sbjct: 281 EVEAMGRSTAVDEIDSNTWGSTSKGKFVLKDLGDEVHEILASEAEKAAGAKTQTRSGLLG 340
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------- 352
S +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 341 SGVSAISGLFRNVVGGKTLTKEDLDKAMKGMEEHLLQKNVAREAAVRLCEGVEKELLGVK 400
Query: 353 -------------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVN 392
AME +L ++LTP S+D+LR++ A + + +PYV+ VGVN
Sbjct: 401 TGSFESINARIQAAMEASLTKMLTPTSSLDLLREIDAITAPPVTSLRKARPYVMSIVGVN 460
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFE 443
GVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++
Sbjct: 461 GVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGRVELYQ 520
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
KGY KD A VAK+A+ A G DVVL+DTAGR +++ LM +L K PD +L VG
Sbjct: 521 KGYGKDAATVAKDAVTHAAHEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVG 580
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + + +DG +++K DT+ D VG +S+V+ + PV
Sbjct: 581 EALVGTDSVAQARNFNAAFGAVRT------LDGFIISKCDTVGDMVGTLVSLVHATNVPV 634
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 635 LFVGVGQHYSDLRNFSVKWAVEKLL 659
>gi|294952735|ref|XP_002787438.1| signal recognition particle receptor alpha subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239902410|gb|EER19234.1| signal recognition particle receptor alpha subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 882
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 203/298 (68%), Gaps = 38/298 (12%)
Query: 311 AKKTGWFSSM---FQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------- 352
A G F+++ ++I G L DLEP L ++LM+KNVA
Sbjct: 290 ATTNGIFATLTRQLKNITGNQVLTNRDLEPVLATFCEQLMSKNVAMDVANAIADGVSSSL 349
Query: 353 -----------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
A+ +++ RILTP++S+D+LR AK + Y +VF+GVNGVG
Sbjct: 350 VGTRTGQFTSVHTTVKDALTQSISRILTPKKSVDVLRAAMQAKANGQVYSIVFLGVNGVG 409
Query: 396 KSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
KSTNL+KVAY+L + + V++ ACDTFR+GAVEQLRTHAR L V +FEKGY KD A +A
Sbjct: 410 KSTNLSKVAYYLRKKGGLRVLICACDTFRAGAVEQLRTHARCLNVDLFEKGYGKDAAEIA 469
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
K+ + A N DVVL+DTAGRMQDNEPLM++L++L+ +NNPDL+LFVGEALVG DA+DQ
Sbjct: 470 KQGLYYAKHNAYDVVLIDTAGRMQDNEPLMKSLARLVAVNNPDLILFVGEALVGYDAIDQ 529
Query: 515 LSKFNQKLAD--LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
L+KF++ L D LS+ + IDGILLTK+DT+DDKVGAALSMVY++G P++FVG GQ
Sbjct: 530 LTKFDRALMDYSLSNKDSSNGIDGILLTKYDTVDDKVGAALSMVYITGEPIVFVGTGQ 587
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ + IFT+GG++LW+ G +D L++ L+E+R+G+ Y+ Y
Sbjct: 1 MIDGISIFTKGGIVLWSTTYAGVQEDTLNKRVDKLVKEVLIEDRAGVDCI-YEDKIERYC 59
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF 95
+KW N +GLV V Y+ +L LY++ LL M+ + F
Sbjct: 60 MKWKNINNIGLVLVIAYEGVLKQLYLNYLLDMLTKEF 96
>gi|256088725|ref|XP_002580476.1| signal recognition particle receptor alpha subunit (sr-alpha)
[Schistosoma mansoni]
Length = 655
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 238/693 (34%), Positives = 342/693 (49%), Gaps = 142/693 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ +I T+GG+ LW + + S I+T ++S +LEE +G + F DS +K
Sbjct: 1 MLDFFVIITKGGIRLWCFPGSIDIFRLS-INTFLKSLILEENAGRSPFVCDSRA----MK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY---SDFDEMFRQLR 117
+ NE L+FVA YQ +L L YVD L + F + Y + ++ +DE F +
Sbjct: 56 FYMDNEFNLLFVAAYQNVLQLNYVDKFLTDIALEFRDKYKNRLVNHDITGSYDE-FLPIY 114
Query: 118 KEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRK 177
+ R E+ +L+K Q++K FE S++S A+ M RK
Sbjct: 115 QATLKRTED---------EFRDLRKGAKQMRK--FE-DSDKSKKTVAS-------MIVRK 155
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLR----NKGGKKTDTVVS 233
+N V+++E+ + + + + D + +LR KG KK+ S
Sbjct: 156 GKNTE-----VDVKETPIAQKESLVPESKLEVNGIDTFEQNRLRLAAKFKGSKKSKEPKS 210
Query: 234 KGSNP--DPKKKITKKNRVWDDSPP---ESKLDF-----TDPAGG-----NGSNIEVEAA 278
+P P K K++R WD+S + LDF T+ G N S E+E
Sbjct: 211 PSLSPMQKPNGKKIKESRRWDNSATGEEAAALDFSGMNHTESTGNQKSDYNFSATEIETL 270
Query: 279 DHGESMM--DKEEV------------------------FSSDSESEEDEEVGKHNKPDAK 312
M D +EV S+DS+ ++ K K
Sbjct: 271 SRLRGTMKDDLDEVNVSSGDEDVDSLELKENESVEQNGLSTDSQLQKSSLDNKQTKSGYL 330
Query: 313 KTGWFSSMFQSI-----AGKANLDKADLEPALKALKDRLMTKNVA--------------- 352
G+ SS+ + + +G+ L + D+ P L+ L++RL+ KNVA
Sbjct: 331 NGGFASSLLRGLRITGGSGRV-LTREDIAPCLEQLRERLVGKNVAMSIADRVCSNVADRL 389
Query: 353 -----------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
++EE RIL R +D+LRD A+ Q +PY +VF GVNGVG
Sbjct: 390 VGTSLGTFERIYPRVRASLEEVCSRILVSGRRVDVLRDALDARTQGRPYSIVFCGVNGVG 449
Query: 396 KSTNLAKVAYWL-LQHKVSVMMAACDT-------------FRSGAVEQLRTHARRLQVPI 441
KSTNLAKV + L ++ V + A + F+ + + + H PI
Sbjct: 450 KSTNLAKVCHLTKLLLQIFVFICAYQSCFCAKVPNTSMGRFKQTILNEFKRH------PI 503
Query: 442 FEKGYEKDPAIVAKEA----IQEATRNGS-DVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ D A+ A EA + TR+ DVVLVDTAGRMQDNEPLMRAL+ LI N P
Sbjct: 504 AQASGRVDNAM-AFEAKGIGFECQTRDRHFDVVLVDTAGRMQDNEPLMRALASLIQTNQP 562
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
DLVLFVGEALVGN+AVDQL KFNQ LAD S S P+ IDGI+LTKFDTIDDKVGAA+SM
Sbjct: 563 DLVLFVGEALVGNEAVDQLVKFNQSLADHSYSDRPRCIDGIVLTKFDTIDDKVGAAISMA 622
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+S P++FVG GQ+Y+DL++L+V ++VK L+K
Sbjct: 623 CISNQPIVFVGTGQTYSDLRQLSVNAVVKALMK 655
>gi|403222020|dbj|BAM40152.1| signal recognition particle receptor subunit alpha [Theileria
orientalis strain Shintoku]
Length = 558
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/313 (48%), Positives = 207/313 (66%), Gaps = 36/313 (11%)
Query: 312 KKTGWF----SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-------------- 353
K + WF S++ + AG L + ++ L LK++L +KNVAA
Sbjct: 245 KSSQWFLDHFSNLVLTYAGNLTLTEETVKAPLNELKNKLRSKNVAADICDMIGDSVSESL 304
Query: 354 ------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
+E A+ RILTP I++++++ Y +VF+GVNGVG
Sbjct: 305 VGRKTESLKSLSATVREALEGAVRRILTPNEPINLIKNIRETNMSGGVYSLVFLGVNGVG 364
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
KST+LAKVA+ L + +V++ ACDTFRSGAVEQL+ HA L + +FE+GY KDP+ +A+
Sbjct: 365 KSTSLAKVAFLLKTNGFNVLLVACDTFRSGAVEQLKIHANNLGLELFERGYGKDPSQIAR 424
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E ++ A N +VVL+DTAGRMQDNEPLM AL+KLI +NNP+++LFVGEALVGNDAVDQL
Sbjct: 425 EGLKYAAANNYNVVLIDTAGRMQDNEPLMAALAKLINVNNPNMILFVGEALVGNDAVDQL 484
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
KFN ++ + S + IDG++LTKFDT+DDKVGAALSMVY++G P++FVG GQSY DL
Sbjct: 485 RKFNAAISKMGESARNRSIDGLVLTKFDTVDDKVGAALSMVYITGRPILFVGNGQSYKDL 544
Query: 576 KKLNVKSIVKTLL 588
L+V IVK L+
Sbjct: 545 SSLDVDVIVKHLI 557
>gi|261334999|emb|CBH17993.1| signal recognition particle receptor alpha subunit, putative
[Trypanosoma brucei gambiense DAL972]
Length = 582
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 234/410 (57%), Gaps = 43/410 (10%)
Query: 214 VSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSN- 272
V+K + + GKK S + + K K+ WD+ +S ++ G +
Sbjct: 180 VTKTGHVIGRKGKKLAGSKSTTATSQKRSKQVKRATRWDEPSADSAVEEQRGQGTRPTEE 239
Query: 273 -IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLD 331
+EV+ A + + + S E++ E ++ G ++ +S G+ LD
Sbjct: 240 ELEVQTALQRAAFIKRLPNGSVAPVREKEWE--------GQQRGLLANWLRSYVGRRELD 291
Query: 332 KADLEPALKALKDRLMTKNVA--------------------------------AMEEALV 359
D + L+++L+TKNVA AM AL
Sbjct: 292 SQDFNNVIPGLREKLITKNVAVEVAEHVCKSVEASLTGKVLGTFESLHQCIEAAMISALR 351
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
RIL P+ I+ILR V +++ + KPY +V GVNGVGKST LAK+ YWL Q+ +VM+AA
Sbjct: 352 RILQPKHEINILRAVASSRGRNKPYSIVLCGVNGVGKSTTLAKITYWLQQNGHTVMIAAG 411
Query: 420 DTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQD 479
DTFR GAVEQL H R L V +F+ GY DP+ VA AI ATR+G DVV++DTAGRMQD
Sbjct: 412 DTFRHGAVEQLEVHGRCLGVDVFQMGYGTDPSAVAAAAISRATRDGCDVVMIDTAGRMQD 471
Query: 480 NEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN-PQLIDGIL 538
+E MRAL+KLI+ N PDLVLFVGEALVGN VDQL +FNQ L D + P+ IDGI+
Sbjct: 472 HESRMRALAKLIHDNQPDLVLFVGEALVGNTGVDQLRRFNQCLVDFVPVGSVPRGIDGIV 531
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
LTKFDTIDDKVGAA+SMVY G P++FVG GQ+Y DLK + +V L+
Sbjct: 532 LTKFDTIDDKVGAAVSMVYELGQPIVFVGAGQTYQDLKVMEPDVVVSALM 581
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ L I + GG++LW + + K S I+ +++ LLE+R+G+ +++ Y +
Sbjct: 1 MIDTLSIVSNGGIVLWE-RSSDVSRKCSIINQVVQEFLLEDRAGM----HETVIGDYKVH 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKR 103
W N+ VA++ + + + L + + F + Y R
Sbjct: 56 WMLENDAHFFVVAIHPKFVSYPQMCAFLRTIARCFVKKYGRVR 98
>gi|74024974|ref|XP_829053.1| signal recognition particle receptor subunit alpha [Trypanosoma
brucei]
gi|70834439|gb|EAN79941.1| signal recognition particle receptor alpha subunit, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 582
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 234/410 (57%), Gaps = 43/410 (10%)
Query: 214 VSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSN- 272
V+K + + GKK S + + K K+ WD+ +S ++ G +
Sbjct: 180 VTKSGHVIGRKGKKLAGSKSTTATSQKRSKQVKRATRWDEPSADSAVEEQRGQGTRPTEE 239
Query: 273 -IEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLD 331
+EV+ A + + + S E++ E ++ G ++ +S G+ LD
Sbjct: 240 ELEVQTALQRAAFIKRLPNGSVAPVREKEWE--------GQQRGLLANWLRSYVGRRELD 291
Query: 332 KADLEPALKALKDRLMTKNVA--------------------------------AMEEALV 359
D + L+++L+TKNVA AM AL
Sbjct: 292 SQDFNNVIPGLREKLITKNVAVEVAEHVCKSVEASLTGKVLGTFESLHQCIEAAMISALR 351
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
RIL P+ I+ILR V +++ + KPY +V GVNGVGKST LAK+ YWL Q+ +VM+AA
Sbjct: 352 RILQPKHEINILRAVASSRGRNKPYSIVLCGVNGVGKSTTLAKITYWLQQNGHTVMIAAG 411
Query: 420 DTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQD 479
DTFR GAVEQL H R L V +F+ GY DP+ VA AI ATR+G DVV++DTAGRMQD
Sbjct: 412 DTFRHGAVEQLEVHGRCLGVDVFQMGYGTDPSAVAAAAISRATRDGCDVVMIDTAGRMQD 471
Query: 480 NEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN-PQLIDGIL 538
+E MRAL+KLI+ N PDLVLFVGEALVGN VDQL +FNQ L D + P+ IDGI+
Sbjct: 472 HESRMRALAKLIHDNQPDLVLFVGEALVGNTGVDQLRRFNQCLVDFVPVGSVPRGIDGIV 531
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
LTKFDTIDDKVGAA+SMVY G P++FVG GQ+Y DLK + +V L+
Sbjct: 532 LTKFDTIDDKVGAAVSMVYELGQPIVFVGAGQTYQDLKVMEPDVVVSALM 581
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ L I + GG++LW + + K S I+ +I+ LLE+R+G+ +++ Y +
Sbjct: 1 MIDTLSIVSNGGIVLWE-RSSDVSRKCSIINQVIQEFLLEDRAGM----HETVIGDYKVH 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
W N+ VA++ + + + L + + F + Y
Sbjct: 56 WMLENDAHFFVVAIHPKFVSYPQMCAFLRTIARCFVKKY 94
>gi|407402200|gb|EKF29134.1| signal recognition particle receptor like protein, putative
[Trypanosoma cruzi marinkellei]
Length = 582
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 237/411 (57%), Gaps = 51/411 (12%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRV------WDDSPPESKLDFTDPAGGNGS 271
Q + KG K T GS P K TKK + WD+ + ++ P +
Sbjct: 184 QIIGRKGNKMT-----VGSKPTASTKATKKGKPLKKATRWDEPSLDPAVNDQRPQRAP-T 237
Query: 272 NIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLD 331
E+EA + + + + + + ++E N+P + W +S G+ LD
Sbjct: 238 QEELEAQAEAQRALFIKRLPNGNVAPVREKE--WENQPRGRLANWL----RSYVGRRELD 291
Query: 332 KADLEPALKALKDRLMTKNVA--------------------------------AMEEALV 359
D + + +L+++L+ KNVA AM AL
Sbjct: 292 SQDFQRVIPSLREKLIAKNVAVEVAEHVCKSVETSLEGMKLGTFDSLHQCIEKAMISALH 351
Query: 360 RILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
RIL P+ ++ILR V +A+ ++KPY +V GVNGVGKST LAK+AYWL Q+ S+M+AA
Sbjct: 352 RILQPKHEVNILRAVASAQSRKKPYSIVLCGVNGVGKSTTLAKIAYWLQQNGHSIMIAAG 411
Query: 420 DTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQD 479
DTFR GAVEQL H R L VP+F+ GY DP+ VA AI +ATR DVV++DTAGRMQD
Sbjct: 412 DTFRHGAVEQLEVHGRCLGVPVFQMGYGTDPSAVAAAAIAQATRQQYDVVMIDTAGRMQD 471
Query: 480 NEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN-PQLIDGIL 538
+E MRAL+KLI+ N PDLVLFVGEALVGN VDQL +FN+ L D S P+ IDGI+
Sbjct: 472 HESRMRALAKLIHDNQPDLVLFVGEALVGNSGVDQLRRFNRCLVDFSPVGTVPRGIDGIV 531
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LTKFDTIDDKVGAALSMVY G P++FVG GQ+Y DLK + +V L++
Sbjct: 532 LTKFDTIDDKVGAALSMVYELGQPIVFVGSGQTYQDLKVMQPDVVVGALME 582
>gi|440638038|gb|ELR07957.1| hypothetical protein GMDG_02816 [Geomyces destructans 20631-21]
Length = 657
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 229/693 (33%), Positives = 333/693 (48%), Gaps = 144/693 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERS--GLASFNYDSAGA--- 55
ML+ I T G++LW+ + I+ LI++ +EER+ G A + D + A
Sbjct: 1 MLDTFEIITTSGVVLWS--RTYTPTSPAIINGLIKNVFIEERTRAGGAGASDDISAANNP 58
Query: 56 -----AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYS-- 107
+TLKWT EL L+FVAVY+ +LHL ++D L+ +K F ++Y D R ++
Sbjct: 59 PYKHDQHTLKWTTVKELNLIFVAVYRSLLHLSWIDKLVDNIKTLFVDLYGDQLRRPHTTG 118
Query: 108 ---DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
FD+ F Q +E EA A S T P + K G
Sbjct: 119 VECHFDKYFDQQIRELEATAATHDLSVPSTPPHFDQKLAPG------------------- 159
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKG 224
D + + G L G S N+ ES T +A + S + L KG
Sbjct: 160 --DDEPPPIPG-VLSRGQSRQANLTSSES--TPIATPDTSRPSTPSS------HILTTKG 208
Query: 225 G---------KKTDTVVSKGSNPDPKKK-----ITKKNRVWD-----DSPPESKLDFTDP 265
G +KT+ +VS G K K KK R WD D +++LD++ P
Sbjct: 209 GPGGKISRRARKTN-LVSSGDEASRKGKGGKAPTAKKGRRWDADGNADEDDDTQLDYSIP 267
Query: 266 ---------AGGNGSNIEVEAADH---------GESMM----DKEEVFSSDSESEEDEEV 303
A G+G +EA D G+ ++ D+ S ++S++
Sbjct: 268 SIDVTNDGEAEGSGLPGAMEAVDQESWGSRTGKGQFVLKDLDDQVHAILSSADSKKAATT 327
Query: 304 GKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------- 352
+ +F+++ G L KADL+ A+K ++D L+ KNVA
Sbjct: 328 TAPSGIVGSSLSAIGGLFRNVVGGKVLSKADLDKAMKGMEDHLLKKNVAREAAMRLCEGV 387
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVH-------AAKEQRKPY 384
AME +L +ILTP S+D+LR++ + ++ +PY
Sbjct: 388 ERELIGTKTGNFESTEARIRAAMEVSLQKILTPSTSLDLLREIDDVTSPSTVSLKKARPY 447
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------- 437
V+ VGVNGVGKSTNL+K+ ++LLQ+K V++ ACDTFRSGAVEQL H R L
Sbjct: 448 VISIVGVNGVGKSTNLSKICFFLLQNKYKVLVVACDTFRSGAVEQLAVHVRNLKELSARE 507
Query: 438 --QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
QV +++KGY KD A VAK+AI A + DVVL+DTAGR +++ LM +L K N
Sbjct: 508 GGQVELYQKGYGKDAASVAKDAITFAAQEKFDVVLIDTAGRRHNDQRLMSSLEKFAKFAN 567
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PD +L VGEALVG D+V Q FN + +DG +++K DT+ D +G +SM
Sbjct: 568 PDKLLMVGEALVGTDSVAQARNFNAAFG------ATRRLDGFIISKCDTVGDMIGTLVSM 621
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+ SG PV+FVG GQ Y+D++ LNVK V LL
Sbjct: 622 VHASGTPVLFVGVGQHYSDIRSLNVKWAVDKLL 654
>gi|407841764|gb|EKG00905.1| signal recognition particle receptor like protein, putative
[Trypanosoma cruzi]
Length = 575
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/316 (50%), Positives = 201/316 (63%), Gaps = 37/316 (11%)
Query: 307 NKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------- 352
N+P + W + G+ LD D + + +L+++L+ KNVA
Sbjct: 264 NQPRGRLANWL----RLYVGRRELDSQDFQRVIPSLREKLIAKNVAVEVAEHVCKSVETS 319
Query: 353 ------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGV 394
AM AL RIL P+ ++ILR V +A+ ++KPY +V GVNGV
Sbjct: 320 LEGMKLGTFDSLHQCIEKAMTSALHRILQPKHEVNILRAVASAQSRKKPYSIVLCGVNGV 379
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
GKST LAK+AYWL Q+ S+M+AA DTFR GAVEQL H R L VP+F+ GY DP+ VA
Sbjct: 380 GKSTTLAKIAYWLQQNDHSIMIAAGDTFRHGAVEQLEVHGRCLGVPVFQMGYGTDPSAVA 439
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
AI +ATR DVV++DTAGRMQD+E MRAL+KLI+ N PDLVLFVGEALVGN VDQ
Sbjct: 440 AAAIAQATRQQYDVVMIDTAGRMQDHESRMRALAKLIHDNQPDLVLFVGEALVGNSGVDQ 499
Query: 515 LSKFNQKLADLSSSPN-PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
L +FNQ L D S P+ IDGI+LTKFDTIDDKVGAALSMVY G P++FVG GQ+Y
Sbjct: 500 LRRFNQCLVDFSPVGTVPRGIDGIVLTKFDTIDDKVGAALSMVYELGQPIVFVGSGQTYQ 559
Query: 574 DLKKLNVKSIVKTLLK 589
DLK + +V L++
Sbjct: 560 DLKVMQPDVVVSALME 575
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + GG++LW + G L ++ +I+ LLE+R+G+ Y
Sbjct: 1 MIDTLSIISNGGIVLWEQSSDSSGRRLM---VNRVIQEVLLEDRAGVPELVIGD----YK 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDE 111
+ W N+ + VY + L L++ L + ++F++ Y R S FDE
Sbjct: 54 VCWALENDAQFFVMCVYPKFLPYLHMGAFLRGIVRTFAKKYG--RIQDSLFDE 104
>gi|71652778|ref|XP_815039.1| signal recognition particle receptor like protein [Trypanosoma
cruzi strain CL Brener]
gi|70880063|gb|EAN93188.1| signal recognition particle receptor like protein, putative
[Trypanosoma cruzi]
Length = 574
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/316 (50%), Positives = 200/316 (63%), Gaps = 37/316 (11%)
Query: 307 NKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------- 352
N+P + W + G+ LD D + + L+++L+ KNVA
Sbjct: 263 NQPRGRLANWL----RLYVGRRELDSQDFQRVIPCLREKLIAKNVAVEVAEHVCKSVETS 318
Query: 353 ------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGV 394
AM AL RIL P+ ++ILR V +A+ ++KPY +V GVNGV
Sbjct: 319 LEGMKLGTFDSLHQCIEKAMTSALHRILQPKHEVNILRAVASAQSRKKPYSIVLCGVNGV 378
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
GKST LAK+AYWL Q+ S+M+AA DTFR GAVEQL H R L VP+F+ GY DP+ VA
Sbjct: 379 GKSTTLAKIAYWLQQNDHSIMIAAGDTFRHGAVEQLEVHGRCLGVPVFQMGYGTDPSAVA 438
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
AI +ATR DVV++DTAGRMQD+E MRAL+KLI+ N PDLVLFVGEALVGN VDQ
Sbjct: 439 AAAIAQATRQQYDVVMIDTAGRMQDHESRMRALAKLIHDNQPDLVLFVGEALVGNSGVDQ 498
Query: 515 LSKFNQKLADLSSSPN-PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
L +FNQ L D S P+ IDGI+LTKFDTIDDKVGAALSMVY G P++FVG GQ+Y
Sbjct: 499 LRRFNQCLVDFSPVGTVPRGIDGIVLTKFDTIDDKVGAALSMVYELGQPIVFVGSGQTYQ 558
Query: 574 DLKKLNVKSIVKTLLK 589
DLK + +V L++
Sbjct: 559 DLKVMQPDVVVSALME 574
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + GG++LW + G L ++ +I+ LLE+R+G+ Y
Sbjct: 1 MIDTLSIISNGGIVLWEQSSDSSGRRLM---VNRVIQEVLLEDRAGVPELVIGD----YK 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDE 111
+ W N+ + VY + L L++ L + ++F++ Y R S FDE
Sbjct: 54 VCWALENDAQFFVMCVYPKFLPYLHMGAFLRGIVRTFAKKYG--RIQDSLFDE 104
>gi|322693736|gb|EFY85586.1| signal sequence receptor alpha subunit [Metarhizium acridum CQMa
102]
Length = 654
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 227/684 (33%), Positives = 338/684 (49%), Gaps = 129/684 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ +E + S +++ I +EE+SG ++ DS AA
Sbjct: 1 MLDTFEIITTNGVVLWS-REYA-PINSSIVNSFISDTFIEEKSGSSALG-DSQSAATNPP 57
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT-- 104
+TLKWT ELG++FVAVY+ +LHL +VD L+ +K F +Y P T
Sbjct: 58 YKSDQHTLKWTVVKELGVIFVAVYRSLLHLSWVDKLVDNIKTIFINLYGEQLKKPHTTIV 117
Query: 105 DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
+ + FD F Q E + S + +P+ ++ G G RG N +GG
Sbjct: 118 ECTGFDNYFDQQLHELDTST----ASNRTVQPVRSVDD--GPSAPGLTYRGRNINGG--- 168
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKG 224
D+G SD+ N SR + + G + A V+K+ + K
Sbjct: 169 QDEGLSDDSSPVLTPN-----------TSRPSTPSTGNLLVAK---AGPVAKMSRRARKA 214
Query: 225 GKKTDTVVSKGSNPDPKKKIT----KKNRVWD------DSPPESKLDFT-DPAG------ 267
S G K+K + KK R WD + + +LD++ +P
Sbjct: 215 KNSASAPASSGDEAASKQKKSAKGPKKGRKWDADGFAEEDDTDVQLDYSANPTSDVEAET 274
Query: 268 -GNGSNIE-VEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAKK----T 314
G S ++ V+A+ G S K +EV S + S E E+ K + K T
Sbjct: 275 VGRSSALDAVDASTWGTSTKGKFVLKDLGDEVHSMLA-SAEAEKAAVATKSETKSGLLGT 333
Query: 315 G--WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------- 352
G +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 334 GVNALGGLFRNVVGGKTLTKEDLDKAMKGMEEHLLRKNVAREAAVRLCEGVEKELVGVRT 393
Query: 353 ------------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVVVFVGVNG 393
AME +L ++LTP S+D+LR++ + A RK PYV+ VGVNG
Sbjct: 394 GNFESINTKIQTAMESSLTKMLTPTSSLDLLREIDSITAPPATSLRKARPYVISIVGVNG 453
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEK 444
VGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++K
Sbjct: 454 VGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGRVELYQK 513
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGE
Sbjct: 514 GYGKDAATVAKDAVSHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGE 573
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVG D+V Q FN + + +DG +++K DT+ D VG +S+V+ + PV+
Sbjct: 574 ALVGTDSVAQARNFNAAFGSV------RTLDGFIISKCDTVGDMVGTLVSLVHATNVPVL 627
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
FVG GQ Y+DL+ +VK V+ LL
Sbjct: 628 FVGVGQHYSDLRNFSVKWAVEKLL 651
>gi|406861527|gb|EKD14581.1| SRP54-type protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 669
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 229/692 (33%), Positives = 329/692 (47%), Gaps = 130/692 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ K S I++LI S +EER+ S + AA
Sbjct: 1 MLDSFEILTTSGVVLWS-KSFA-PTSPSIINSLITSVFIEERTLPGSGTANDISAADNPP 58
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--KRTDYS-- 107
+TLKWT EL L+FVAVY+ +LHL ++D L+ +K F ++Y KR + +
Sbjct: 59 YKYEQHTLKWTTVKELNLIFVAVYRSLLHLSWIDKLVDNIKAIFVDLYGDQLKRPNTTLV 118
Query: 108 --DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
FDE F Q + ++L+K+ L K + F + S G N
Sbjct: 119 ECHFDEYFDQ-------QIQKLEKT--------GLGKDTRAAESSLFVEEAPPSTSG--N 161
Query: 166 DDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVA---NGKENT-SSNIGAFDVSKLQKLR 221
D + M G L G S ++ + T V N + +T +S+I V K
Sbjct: 162 FDDEPPPMPGL-LSRGQSKNNYRDLTSNDSTPVVTPENSRPSTPASHILTGKVGPGGKGS 220
Query: 222 NKGGKKTDTVVSKGSNPDP---------KKKITKKNRVWD-----DSPPESKLDFTDPAG 267
+ K +T S+ D K KK R WD D ++ LD++ PA
Sbjct: 221 RRARKAANTPTVYASSGDESFFKKGKTGKPSGAKKGRKWDADGLADEDSDTPLDYSAPAN 280
Query: 268 GN-----------GSNIEVEAADHGESMMDKEEVF------------SSDSESEEDEEVG 304
G G+ EV+ A G + V S+D++ E+
Sbjct: 281 GATSGEDEGKERPGAMEEVDQATWGSKTGKGQFVLKDLDDQVNSILASADAKKAEETSTA 340
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
+F+++ G L K DL A+K ++D L+ KNVA
Sbjct: 341 ATTGIVGSSLSAIGGLFRNVVGGKTLTKEDLNKAMKGMEDHLLRKNVAREAAVRLCEGVE 400
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAK-------EQRKPYV 385
AME +L +ILTP S+D+LR++ A ++R+PYV
Sbjct: 401 RELIGVKTGNFESVQAKIQTAMESSLRKILTPTSSLDLLREIDAVTAPSALSLQKRRPYV 460
Query: 386 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------- 437
+ VGVNGVGKSTNL+K+ ++LLQ+K V++ ACDTFRSGAVEQL H R L
Sbjct: 461 MSIVGVNGVGKSTNLSKICFFLLQNKYKVLVVACDTFRSGAVEQLAVHVRNLKELTSREG 520
Query: 438 -QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
QV +++KGY KD A VAK+A+ A G DVVL+DTAGR +++ LM +L K P
Sbjct: 521 GQVELYQKGYGKDAANVAKDAVTLAGEEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQP 580
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L VGEALVG D+V Q FN S +DG +++K DT+ D VG +SMV
Sbjct: 581 DKILMVGEALVGTDSVAQARNFNAAFGSGRS------LDGFIISKCDTVGDMVGTLVSMV 634
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ + PV+FVG GQ Y+DL+ L+VK V+ LL
Sbjct: 635 HATNVPVLFVGVGQHYSDLRNLSVKWAVEKLL 666
>gi|396463367|ref|XP_003836294.1| similar to signal recognition particle receptor subunit alpha
[Leptosphaeria maculans JN3]
gi|312212847|emb|CBX92929.1| similar to signal recognition particle receptor subunit alpha
[Leptosphaeria maculans JN3]
Length = 641
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 220/679 (32%), Positives = 322/679 (47%), Gaps = 130/679 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----- 55
ML+ I T G++LW+ + + + I++LIR +EER D AGA
Sbjct: 1 MLDTFEIVTTSGVVLWSRTYV--PVGANVINSLIRDVFIEER---IQPQADDAGAKPSYR 55
Query: 56 --AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK-RTDYSD---- 108
YTLKWT +LGL+FVAVYQ ++HL ++D LL ++ F +Y + +T+ S
Sbjct: 56 KDGYTLKWTASKDLGLMFVAVYQSLVHLTWIDKLLDNVRALFIGLYGEQLKTERSSVVNC 115
Query: 109 --FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAND 166
F F + E E ++ S ++T P ++ + ND
Sbjct: 116 DKFASYFDRQIHELEGASDSGAPSIKLTTPESS-----------------------TDND 152
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGK 226
D + L+ + + + + V + T ++ G K R GGK
Sbjct: 153 SADERAPQPPSLQKPQRPLYDTSADSTPVPTPDTSRPTTPAHSGIL----TGKTRPLGGK 208
Query: 227 KT-----------DTVVSKGSNPDPKKKI---TKKNRVW--------DDSPPE-SKLDFT 263
+ S G K+K KK RVW DDS + S+ D
Sbjct: 209 MSRRDKKKASAFNSAPASSGDEASVKRKAKGSAKKGRVWGEFGAEEEDDSVLDYSQSDVR 268
Query: 264 DPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT--------- 314
GN + E++ G +K E D + E D + + N K T
Sbjct: 269 GETSGNEALEEIKQETWGRKT-NKGEFVLKDLDDEMDAIIAEQNAKREKDTPAAASGLVG 327
Query: 315 ---GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------- 352
G +F+++ G L K DL LK ++ L+ KNVA
Sbjct: 328 SSLGAIGGLFRNVVGGKTLTKEDLAKPLKGMEQHLLKKNVALEAAVRLCESVERDLVGMK 387
Query: 353 -------------AMEEALVRILTPRRSIDILRDVHAAK-EQRKPYVVVFVGVNGVGKST 398
+ME+AL +ILTP S+D+LR++ +PYV+ VGVNGVGKST
Sbjct: 388 TPSFTTIETTIKASMEKALTKILTPTSSLDLLREIQQTNATTSRPYVLSIVGVNGVGKST 447
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKD 449
NL+K+A++LLQ+ V++AA DTFRSGAVEQLR H RL QV +FEKGY KD
Sbjct: 448 NLSKIAFFLLQNHHRVLIAAADTFRSGAVEQLRVHVDRLKELSQREGGQVDLFEKGYGKD 507
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A +A +A+ A +N +VVL+DTAGR +++ LM +L K L NPD +L VGEALVG
Sbjct: 508 AANIAADAVIFAEKNNFNVVLIDTAGRRHNDQRLMSSLEKFGKLANPDKILMVGEALVGT 567
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
D+V Q FN S +DG +++K DT+ D VG +SMV+ +G PV+F+G G
Sbjct: 568 DSVAQARNFNASFGAGRS------LDGFVISKCDTVGDMVGTLVSMVHATGIPVVFLGTG 621
Query: 570 QSYTDLKKLNVKSIVKTLL 588
Q Y+DL+ LNV ++ + L+
Sbjct: 622 QHYSDLRTLNVGAVTRLLM 640
>gi|84995142|ref|XP_952293.1| signal recognition particle receptor alpha subunit [Theileria
annulata strain Ankara]
gi|65302454|emb|CAI74561.1| signal recognition particle receptor alpha subunit, putative
[Theileria annulata]
Length = 547
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/236 (59%), Positives = 181/236 (76%), Gaps = 4/236 (1%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+E+++ RILTP+ I++++ V Y +VF+GVNGVGKST+LAKVAY L
Sbjct: 315 ALEDSVRRILTPKNPINLIKQVKELNANGSVYSIVFLGVNGVGKSTSLAKVAYLLKSSGF 374
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V++ ACDTFRSGAVEQL+TH R L + +FE+GY KDP+ +AKE ++ AT N DVVL+D
Sbjct: 375 KVLVIACDTFRSGAVEQLKTHTRNLGLQLFERGYGKDPSQIAKEGLKYATANQFDVVLID 434
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLM AL+KLI +NNP+L+LFVGEALVGNDAVDQL KFN + +
Sbjct: 435 TAGRMQDNEPLMAALTKLITVNNPNLILFVGEALVGNDAVDQLKKFNTAIGKGTDRS--- 491
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ID +LLTKFDT+DDKVGAALSMVY++G P++FVG GQ+Y+DL+ L+V+ I K LL
Sbjct: 492 -IDALLLTKFDTVDDKVGAALSMVYITGKPILFVGNGQTYSDLQPLDVELITKFLL 546
>gi|71030694|ref|XP_764989.1| signal recognition particle receptor subunit alpha [Theileria parva
strain Muguga]
gi|68351945|gb|EAN32706.1| signal recognition particle receptor alpha subunit, putative
[Theileria parva]
Length = 579
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 199/304 (65%), Gaps = 36/304 (11%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
F+++ +G + + L + L D+L +KNVA
Sbjct: 279 FTTLVLKYSGNMMITEESLVTPISILTDKLRSKNVAGDICEMIGRSIVTHLVGKRTESLR 338
Query: 353 --------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
A+E ++ RILTP+ I++++ V Y +VF+GVNGVGKST+LAKVA
Sbjct: 339 SLSSTVRTALESSVRRILTPKDPINLIKQVKHTVANGGIYSIVFLGVNGVGKSTSLAKVA 398
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
Y L + V++ ACDTFRSGAVEQL+TH L + +FE+GY KDPA +AKE I+ A N
Sbjct: 399 YLLKSNGFKVLVVACDTFRSGAVEQLKTHTTNLGLHLFERGYGKDPAQIAKEGIKHAVNN 458
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DVVL+DTAGRMQDNEPLM AL+KLI +NNP+L++FVGEALVGNDAVDQL KFN +
Sbjct: 459 QFDVVLIDTAGRMQDNEPLMAALTKLIVVNNPNLIIFVGEALVGNDAVDQLKKFNLAIGK 518
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ + ID +LLTKFDT+DDKVGAALSMVY++G P++FVG GQ+Y+DL+ LN++ I
Sbjct: 519 GTD----RTIDALLLTKFDTVDDKVGAALSMVYITGKPILFVGNGQTYSDLQPLNIELIT 574
Query: 585 KTLL 588
+ LL
Sbjct: 575 QFLL 578
>gi|449015852|dbj|BAM79254.1| signal recognition particle receptor alpha subunit [Cyanidioschyzon
merolae strain 10D]
Length = 664
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 222/673 (32%), Positives = 336/673 (49%), Gaps = 100/673 (14%)
Query: 5 LLIFTRGGLILW-----------TCKELGNALKGSPIDTLIRSCLLEERSG--LASFNYD 51
IF GGL+L+ T + +A S + L+R+ LL E++G +A
Sbjct: 4 FCIFHLGGLVLFFRDLSEASDAGTDDQHTSAQPESVLRDLVRTVLLAEKAGARIAQLRKQ 63
Query: 52 SAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP-----KRTDY 106
+ + W N+ LVF A L L ++ L + SF + Y + +
Sbjct: 64 -----HLVAWRAANQFQLVFAAEAPSTLELHLLEQFLECCRSSFCQTYGSLLQRRRWSTE 118
Query: 107 SDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGG-GSAN 165
SDFD + + ARA + + + G LQ+G + + S
Sbjct: 119 SDFDSFAETVDR---ARATLQLGNTRAVFAADEHAHVGAALQRGRVSSPTPAANTRSSVQ 175
Query: 166 DDGDSDNMRGRKLEN-----------GHSNVGNVEIEESRVTGVANGKE--NTSSNIGAF 212
DS + L GH+ + + V +N + N S + A
Sbjct: 176 TLEDSQSAVPSSLSAPTTDAPDVHAPGHAGSIKDTLADDDVPIRSNAEPLMNASIPVEAA 235
Query: 213 DVSKLQKLRNKGGKKTDTVVSKGS-NPD---PKKKITK--KNRVWDDSPPESK----LDF 262
+ N+ K + + + S P+ P KK TK R WDDS P ++ LD
Sbjct: 236 ALETSTHPSNQAKKLSRGSIQRHSARPEQRRPPKKHTKLAAGRRWDDSIPTAEELAALDL 295
Query: 263 TDPAG---GNGSNIEVEAADHGESMMDKEEVFSSDSESEE------DEEVGKHNKPDAKK 313
+ A G+ ++ A + E+ + +F + + EE + +VG A+
Sbjct: 296 SGEASCPLGSADDVGRARAAYLETQ-PRASIFENLTTDEEATNNDMERDVGADG---ARG 351
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------------------- 351
+G +AG L +ADLE L+ +DRL+ +NV
Sbjct: 352 SGNLWRTLGRLAGSRPLTRADLEKPLQYFRDRLIARNVAPTVAEKLTQSVEASLENRTLD 411
Query: 352 ---------AAMEEALVRILTPRRSI-DILRDVHAAKEQ---RKPYVVVFVGVNGVGKST 398
AA+E+AL R+L P D++ + +++ R+P+V+VF GVNGVGKST
Sbjct: 412 ALTVHRMVRAAVEDALQRVLQPLHGTQDLVLAIEQHRQRASIRRPFVIVFTGVNGVGKST 471
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAI 458
LAK+A+ LLQH + +++AA DTFR+GA+EQLR HAR L +P++E+GY KDP+ VA AI
Sbjct: 472 TLAKIAFLLLQHNLRLLLAAGDTFRAGAIEQLRIHARCLNIPLYERGYGKDPSSVAAAAI 531
Query: 459 QEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKF 518
+A + DVVL+DTAGRMQDNEPLM+AL+ L+ P+ + FVGEALVGN+A+DQL KF
Sbjct: 532 SQAEQEQRDVVLIDTAGRMQDNEPLMKALAALVQRAAPERLFFVGEALVGNEAIDQLVKF 591
Query: 519 NQKLADLS--SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
NQ L S P+LIDGI+LTKFD +D+KVGAA++M+Y + P++FVG GQ+Y DL+
Sbjct: 592 NQALLRYQQGSGGKPRLIDGIILTKFDAVDEKVGAAVTMMYTTSIPIVFVGTGQTYHDLE 651
Query: 577 KLNVKSIVKTLLK 589
+N+ +VK L++
Sbjct: 652 PVNIPKLVKALVR 664
>gi|154346124|ref|XP_001568999.1| putative signal recognition particle receptor like protein
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066341|emb|CAM44132.1| putative signal recognition particle receptor like protein
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 601
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/318 (49%), Positives = 204/318 (64%), Gaps = 33/318 (10%)
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
K + + + G ++ +S G +D DL+ + L+++L+ KNVA
Sbjct: 284 KEREWEGQPRGRLATWLRSYVGTREVDADDLKHIIPDLREKLIAKNVAVEVAEQVCKSVE 343
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVN 392
AM +L RIL P+R +++LRDV AK KPY ++ GVN
Sbjct: 344 VSLAGKRLGTFDSLYKTVEDAMTASLRRILQPKREVNLLRDVAVAKAAHKPYSIILCGVN 403
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAI 452
GVGKST+LAK+AYWL Q+ SV++AA DTFR GAVEQL H R L VP+F+ GY DP+
Sbjct: 404 GVGKSTSLAKIAYWLQQNDNSVLLAAGDTFRHGAVEQLEVHGRCLGVPVFQLGYGTDPSA 463
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
VA AI A++ +DVV++DTAGRMQD+E MRAL+KLI+ N PDLVLFVGEALVGN+ +
Sbjct: 464 VAAAAIVHASKQHTDVVIIDTAGRMQDHESRMRALAKLIHDNQPDLVLFVGEALVGNNGI 523
Query: 513 DQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
DQL KFNQ L D + + IDGI+LTKFDTIDDKVGAALSMVY G P++FVG GQ+
Sbjct: 524 DQLRKFNQCLVDFAPVGSRSRGIDGIVLTKFDTIDDKVGAALSMVYELGQPIVFVGVGQT 583
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DLK + + +V L+K
Sbjct: 584 YQDLKVIEPEVVVSALMK 601
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + G++LW T E G + + ++ LI+ LLE+R+GLA ++ D Y
Sbjct: 1 MIDTLSIVSDSGVVLWQRTTHETG---RRAMVNKLIQEVLLEDRAGLAQYSVDD----YQ 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDF 109
L+W N+ VAVY + Y+ L + +F++ Y K+T DF
Sbjct: 54 LRWVLENDAKFFVVAVYPKFFKPHYMHVFLRDIATTFAKKYG-KQTARQDF 103
>gi|322712148|gb|EFZ03721.1| signal sequence receptor alpha subunit [Metarhizium anisopliae
ARSEF 23]
Length = 655
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 227/691 (32%), Positives = 329/691 (47%), Gaps = 143/691 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ K + S +++ I +EE+SG S DS AA
Sbjct: 1 MLDTFEIITTNGVVLWSRKYA--PINSSVVNSFISDTFIEEKSG-GSVVGDSQSAATNPP 57
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT-- 104
+TLKWT ELG++FVAVY+ +LHL +VD L+ +K F +Y P T
Sbjct: 58 YKSDQHTLKWTVVKELGVIFVAVYRSLLHLSWVDKLVDNIKTIFINLYGEQLKKPHTTIV 117
Query: 105 DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
+ + FD F Q E + S +P+ ++
Sbjct: 118 ECTGFDNYFDQQLHELDTST----ASNPTVQPVRSV------------------------ 149
Query: 165 NDDGDSD---NMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSN-----IGAFDVSK 216
DD S RGR + +G + V + S V + +T S A V+K
Sbjct: 150 -DDSPSAPGLTYRGRNINDGQNE--GVSNDSSPVPTPNTSRPSTPSTGNLLVAKAGPVAK 206
Query: 217 LQKLRNKGGKKTDTVVSKGSNPDPKKKIT----KKNRVWD------DSPPESKLDFT-DP 265
+ + K T S G K+K + KK R WD + + +LD++ +P
Sbjct: 207 MSRRARKAKNSTSAPASSGDEAASKQKKSARGPKKGRKWDADGFAEEDDTDVQLDYSANP 266
Query: 266 AG-------GNGSNIE-VEAADHGESMMDK-------EEVFS---SDSESEEDEEVGKHN 307
G S ++ VEA+ G S K +EV S S +
Sbjct: 267 TSDVEAETVGRSSALDAVEASTWGTSTKGKFVLKDLGDEVHSMLASAEAEKAAAATKSET 326
Query: 308 KPDAKKTG--WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------- 352
K TG S MF+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 327 KSGLLGTGVNALSGMFRNVVGGKTLTKEDLDKAMKGMEEHLLRKNVAREAAVRLCEGVEK 386
Query: 353 -------------------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVV 386
AME +L ++LTP S+D+LR++ + A RK PYV+
Sbjct: 387 ELVGVKTGNFESISSKIQTAMESSLTKMLTPTSSLDLLREIDSITAPPATSLRKARPYVI 446
Query: 387 VFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL--------- 437
VGVNGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L
Sbjct: 447 SIVGVNGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGG 506
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
QV +++KGY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD
Sbjct: 507 QVELYQKGYGKDAATVAKDAVSHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPD 566
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+L VGEALVG D+V Q FN + + +DG +++K DT+ D VG +S+V+
Sbjct: 567 KILMVGEALVGTDSVAQARNFNAAFGSV------RTLDGFIISKCDTVGDMVGTLVSLVH 620
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 621 ATNVPVLFVGVGQHYSDLRNFSVKWAVEKLL 651
>gi|302920457|ref|XP_003053074.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734014|gb|EEU47361.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 658
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 221/690 (32%), Positives = 330/690 (47%), Gaps = 137/690 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G+++W+ + S I+ I +EE+SG + + DS AA
Sbjct: 1 MLDSFEILTTSGVVVWS--RTYTPINPSIINNFIADTFIEEKSGAVALS-DSRSAANNPA 57
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT------- 104
+TLKWT ELG++FVAVY+ +LHL +VD L+ ++ F ++Y + T
Sbjct: 58 YKSDQHTLKWTLVKELGVIFVAVYRSLLHLSWVDKLVDNIRTIFVKLYGEQLTKPHTTLV 117
Query: 105 DYSDFDEMF-RQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
+ FDE F +QL++ + A+ + P+ K G L G
Sbjct: 118 ECHAFDEYFDQQLQELDQTTAKGVPSVTVGALPLEE-KTISGNL--------------GD 162
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSK----LQK 219
RGR L N + +S NG T+ + V+K + +
Sbjct: 163 EPPVAPGLTYRGRTLNNTNEPTS----RDSTPALTPNGSRPTTPSNNHLLVAKGPLKMSR 218
Query: 220 LRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSNIE 274
K ++ VS G KKK KK R WD D + +LD++ A E
Sbjct: 219 RARKAKNQSSAPVSSGDEAPKKKKAPKKGRKWDADGFADEDDDVQLDYSAKAHATS---E 275
Query: 275 VEAADHGESMMDKE------------------------EVFSSDSESEEDEEVGKHNKPD 310
EA G S E E+ +S++E D + ++P
Sbjct: 276 SEAEATGRSTAIDEIDSNTWGSRSKGKFVLKDLGDEVHEILASEAEKAADAK----SQPK 331
Query: 311 AKKTG----WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------- 352
A G S +F+++ G L KADL+ A+K +++ L+ KNVA
Sbjct: 332 AGLFGSGVNAISGLFRNVVGGKTLTKADLDAAMKGMEEHLLKKNVAREAAVRLCEGVEKE 391
Query: 353 ------------------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVV 387
AME +L ++LTP S+D+LR++ A + + +PYV+
Sbjct: 392 LLGVKTGSFESINTRIQAAMEASLTKMLTPTSSLDLLREIDAITAPSVTSMRKARPYVMS 451
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ--------- 438
VGVNGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+
Sbjct: 452 IVGVNGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGR 511
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
V +++KGY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD
Sbjct: 512 VELYQKGYGKDAATVAKDAVTHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDK 571
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+L VGEALVG D+V Q FN + + +DG +++K DT+ D VG +S+V+
Sbjct: 572 ILMVGEALVGTDSVAQARNFNAAFGAVRT------LDGFIISKCDTVGDMVGTLVSLVHA 625
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 626 TNVPVLFVGVGQHYSDLRNFSVKWAVEKLL 655
>gi|123473765|ref|XP_001320069.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121902866|gb|EAY07846.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 533
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 229/384 (59%), Gaps = 37/384 (9%)
Query: 238 PDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSES 297
P+ K + +K SP + ++ +T + NIE ++ G + K E +
Sbjct: 151 PNKKAQRSKSEPGRKKSPSKERIRYTSKSK---ENIEEQSTVVGLEEVGKVERIEVKQYN 207
Query: 298 EEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---- 353
+D P+A K+ +FS + I G+ +LD LEP LK + L++KNVA+
Sbjct: 208 MDDFTGVFQANPNANKS-FFSGILSGIVGEKSLDIKTLEPFLKEFESHLISKNVASAIAH 266
Query: 354 ----------------------------MEEALVRILTPRRSIDILRDVHAAKEQRKPYV 385
+ E + RILTP RSIDI+RD+ A++Q KPYV
Sbjct: 267 ELTTAVGQKLDGTKCGTFQSVKTVVMATLREQIERILTPHRSIDIIRDIQLARKQGKPYV 326
Query: 386 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKG 445
F+GVNGVGKST LAKVAY + H V++ CDTFRSGAV+QL HA RL + +F++G
Sbjct: 327 FSFIGVNGVGKSTTLAKVAYLMKSHDFKVLIVGCDTFRSGAVKQLAEHAERLGIELFQRG 386
Query: 446 YEK-DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
++ DP VAK+AIQ A DVVLVDTAGRMQ++E LM+ +++LI PDL LFV E
Sbjct: 387 NDRRDPVPVAKDAIQYAIDKKIDVVLVDTAGRMQNSEGLMKQIARLINEVKPDLSLFVAE 446
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVG + DQ+S F+ L + + + IDGI+LTKFDTIDDKVGAAL++VY +G P++
Sbjct: 447 ALVGGNGSDQISSFDMNLKRYAGVKDAKGIDGIVLTKFDTIDDKVGAALTLVYETGHPII 506
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
++G GQ+Y DL+++N + +V TLL
Sbjct: 507 YLGVGQTYRDLRRMNPEFVVNTLL 530
>gi|401420442|ref|XP_003874710.1| putative signal recognition particle receptor like protein
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490946|emb|CBZ26210.1| putative signal recognition particle receptor like protein
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 605
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/318 (49%), Positives = 203/318 (63%), Gaps = 33/318 (10%)
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
K + + + G ++ +S G +D DL+ + L+++L+ KNVA
Sbjct: 288 KEREWEGQSRGRLATWLRSYVGTREVDAEDLKNIIPDLREKLIAKNVAVEVAEHVCKSVE 347
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVN 392
AM +L RIL P+R +++LRDV AAK KPY +V GVN
Sbjct: 348 ASLAGKRLGTFDSLYKTVEDAMMASLRRILQPKREVNLLRDVAAAKAAGKPYSIVLCGVN 407
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAI 452
GVGKST+LAK+ YWL Q+ SV++AA DTFR GAVEQL H R L VP+F+ GY DP+
Sbjct: 408 GVGKSTSLAKITYWLQQNGNSVLLAAGDTFRHGAVEQLGVHGRCLGVPVFQLGYGTDPSA 467
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
VA A+ +A + DVV+VDTAGRMQD+E MRAL+KLI+ N PDLVLFVGEALVGN+ +
Sbjct: 468 VAAAAMAQANKQHIDVVMVDTAGRMQDHESRMRALAKLIHDNQPDLVLFVGEALVGNNGI 527
Query: 513 DQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
DQL KFNQ L D + + IDGI+LTKFDTIDDKVGAALSMVY G P++FVG GQ+
Sbjct: 528 DQLRKFNQCLVDFAPVGSRSRGIDGIVLTKFDTIDDKVGAALSMVYELGQPIVFVGVGQT 587
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DLK + + +V L+K
Sbjct: 588 YQDLKVIEPEVVVSALMK 605
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 1 MLEQLLIFTRGGLILWTC--KELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + G++LW C E G + + ++ LI+ LLE+R+G A +N D Y
Sbjct: 1 MIDTLSIVSDSGVVLWQCTTHETG---RRTMVNKLIQEVLLEDRAGHAQYNVDD----YQ 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDF 109
L+WT N+ VAVY + Y+ L + +F++ Y K+T DF
Sbjct: 54 LRWTLENDARFFVVAVYPKFFKPHYMHVFLRDIATTFAKKYG-KQTAQQDF 103
>gi|400593362|gb|EJP61313.1| SRP54-type protein [Beauveria bassiana ARSEF 2860]
Length = 631
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 320/663 (48%), Gaps = 110/663 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER-SG--LASFNYDSAGAAY 57
ML+ I T G++LW+ + S I+ I +EER SG + S SA AY
Sbjct: 1 MLDTFEIITTSGVVLWS--RTYAPVNPSVINDFIADTFIEERHSGNVVRSAQSASANPAY 58
Query: 58 -----TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--D 105
T KWT ELG++FV VY+ +LHL +VD L+ ++ F +Y P T +
Sbjct: 59 KTDHHTFKWTMVKELGVIFVVVYRSLLHLSWVDKLVDNIQTIFVSLYGEQVKKPHTTLVE 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQ--GGQLQKGGFERGSNRSGGGS 163
FDE F Q +E + + SK TK ++ G +L G
Sbjct: 119 CHGFDEYFDQQLRELDRSS-----SKDYTKTTEDVDSSPDGKRLSAPGL----------- 162
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNI---GAFDVSKLQKL 220
RGR + NG + +S T + SSN+ A V+K+ +
Sbjct: 163 --------TYRGRTVSNGADK--DAASPDSTPTA-SRPTTPASSNLVVAKAGPVAKMSRR 211
Query: 221 RNKGGKKTDTVVSKGSNPDPKKKIT-KKNRVWD-----DSPPESKLDFTDPAG-GNGSNI 273
K T V S + KK + KK R WD D + +LD++ G G G +
Sbjct: 212 ARKAKHNTGPVSSGDESTRSKKGPSGKKGRKWDADGFADEDDDVQLDYSAQGGDGIGKSS 271
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKK---------------TGWFS 318
VE+ D + F +E + + + + S
Sbjct: 272 AVESVDSSTWGTSSKGKFVLRDLGDEVQGILATAEAEKAAASRAASAKSGILGSGVNAIS 331
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-----------------AMEEALVRI 361
+F+++ G L DL A+K +++ L+ KNVA AME +L ++
Sbjct: 332 GIFRNVVGGKTLTSDDLAKAMKGMEEHLLQKNVAREAAVRLCEGINARIQTAMEASLTKM 391
Query: 362 LTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSV 414
LTP S+D+LRD+ + + QR+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V
Sbjct: 392 LTPTSSLDLLRDIDSITSPPVTSLRQRRPYVMSIVGVNGVGKSTNLSKICFFLLQNKYKV 451
Query: 415 MMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKDPAIVAKEAIQEATRNG 465
++AA DTFRSGAVEQL H R L QV +++KGY KD A VAK+A+ A +
Sbjct: 452 LIAAGDTFRSGAVEQLAVHVRNLKELTVREGGQVELYQKGYGKDAATVAKDAVAHAAQER 511
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVL+DTAGR +++ LM +L K PD +L VGEALVG D+V Q FN +
Sbjct: 512 YDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVGTDSVAQARNFNAAFGAV 571
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S +DG +++K DT+ D VG +S+V+ + PV+FVG GQ Y+DL+ +VK V+
Sbjct: 572 RS------LDGFIISKCDTVGDMVGTLVSLVHATNVPVLFVGVGQHYSDLRNFSVKWAVE 625
Query: 586 TLL 588
LL
Sbjct: 626 KLL 628
>gi|428170455|gb|EKX39380.1| hypothetical protein GUITHDRAFT_160017 [Guillardia theta CCMP2712]
Length = 258
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/237 (63%), Positives = 184/237 (77%), Gaps = 19/237 (8%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
AME+ L+RILTP++S+DILR V A+ +++PYVVVFVGVNGVGKST+L+KV +WL K+
Sbjct: 41 AMEDGLMRILTPKQSMDILRQVKVAQNEKRPYVVVFVGVNGVGKSTSLSKVCFWLKSQKL 100
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V++AACDTFRSGAVEQL+THA RL+VP+FEKGY KD A +A +A++ A +NG DVVLVD
Sbjct: 101 KVLLAACDTFRSGAVEQLKTHAARLEVPVFEKGYNKDAASIAMDAVKYAGQNGFDVVLVD 160
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQDNEPLMRALSKL+ LNNPDLV + E G P+
Sbjct: 161 TAGRMQDNEPLMRALSKLVNLNNPDLVQALKETAYGQGP-------------------PR 201
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
LIDGI+LTKFDTIDDKVGAA+SM YV+G PV+ VG GQ+YTDLKKLN K+IVK LL+
Sbjct: 202 LIDGIMLTKFDTIDDKVGAAVSMTYVTGQPVLLVGVGQTYTDLKKLNAKNIVKLLLR 258
>gi|440290931|gb|ELP84230.1| signal recognition particle receptor alpha subunit, putative
[Entamoeba invadens IP1]
Length = 490
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 180/239 (75%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ + E L RI+TP ID+ +++ K + + + +VF+GVNGVGKST+L+K+A WL
Sbjct: 252 IQGVTEVLTRIMTPSNVIDVAKEIEEKKSKGEVFTMVFIGVNGVGKSTSLSKMACWLTSL 311
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
VM+AACDTFR+GAV+QL HA+RL +P++EKGY+ DP+ +A+ A++ A +G DV+L
Sbjct: 312 NYKVMIAACDTFRAGAVDQLAVHAQRLGIPLYEKGYDTDPSAIARNALKRAKEDGYDVLL 371
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGRMQ N+ LM+A++KL++ DLVLFV EALVGNDAV+QL+ FN+ + D +
Sbjct: 372 VDTAGRMQGNDALMKAIAKLVHSAQTDLVLFVAEALVGNDAVNQLTTFNRYVIDYAPVKT 431
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ + GI+LTKFDTIDDKVGAA+S+ Y +G P++FVG GQ YTDLK LNV+ ++ +LLK
Sbjct: 432 TKGVSGIILTKFDTIDDKVGAAISLTYCTGIPILFVGTGQHYTDLKLLNVQDLIDSLLK 490
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 2 LEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKW 61
+E++ + T GG++L++ K + ++G P++T+I+ +L +RSG N ++ Y + W
Sbjct: 1 MEEICVVTTGGIVLYSKKY--SEVRGEPVNTMIKEYILADRSGECKANIEN----YQVHW 54
Query: 62 TFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKR 103
+ E +F+AV+ + + + Y + +L+ ++ + + Y P +
Sbjct: 55 VTNVETSTLFIAVHMKTIKVDYCERMLSDIEAKYRDEYLPSK 96
>gi|398024652|ref|XP_003865487.1| signal recognition particle receptor like protein, putative
[Leishmania donovani]
gi|322503724|emb|CBZ38810.1| signal recognition particle receptor like protein, putative
[Leishmania donovani]
Length = 605
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 202/318 (63%), Gaps = 33/318 (10%)
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
K + + + G ++ +S G +D DL+ + L+++L+ KNVA
Sbjct: 288 KEREWEGQSRGRLATWLRSYVGTREVDAEDLKKIIPDLREKLIAKNVAVEVAEHVCKSVE 347
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVN 392
AM +L RIL P+ +++LRDV AAK KPY +V GVN
Sbjct: 348 ASLAGKRLGTFDSLYKTVEDAMMASLRRILQPKCEVNLLRDVAAAKAAGKPYSIVLCGVN 407
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAI 452
GVGKST+LAK+ YWL Q+ SV++AA DTFR GAVEQL H R L P+F+ GY DP+
Sbjct: 408 GVGKSTSLAKITYWLQQNGNSVLLAAGDTFRHGAVEQLGVHGRCLGAPVFQLGYGTDPSA 467
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
VA A+ +A++ DVV++DTAGRMQD+E MRAL+KLI+ N PDLVLFVGEALVGN+ +
Sbjct: 468 VAAAAMAQASKQHIDVVMIDTAGRMQDHESRMRALAKLIHDNQPDLVLFVGEALVGNNGI 527
Query: 513 DQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
DQL KFNQ L D + + IDGI+LTKFDTIDDKVGAALSMVY G P++FVG GQ+
Sbjct: 528 DQLRKFNQCLVDFAPVGSRSRGIDGIVLTKFDTIDDKVGAALSMVYELGQPIVFVGVGQT 587
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DLK + + +V L+K
Sbjct: 588 YQDLKVIEPEVVVSALMK 605
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 1 MLEQLLIFTRGGLILWTC--KELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + G++LW C E G + ++ LI+ LLE+R+GLA ++ D+ Y
Sbjct: 1 MIDTLSIVSDSGVVLWQCTTHETGRRVM---VNKLIQEVLLEDRAGLAQYSVDN----YQ 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDF 109
L+W N+ VAVY + Y+ L + +F++ Y K+T DF
Sbjct: 54 LRWVLENDARFFVVAVYPKFFKPHYMHVFLRDIATTFAKKYG-KQTAQQDF 103
>gi|146103857|ref|XP_001469660.1| putative signal recognition particle receptor like protein
[Leishmania infantum JPCM5]
gi|134074030|emb|CAM72771.1| putative signal recognition particle receptor like protein
[Leishmania infantum JPCM5]
Length = 605
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 202/318 (63%), Gaps = 33/318 (10%)
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
K + + + G ++ +S G +D DL+ + L+++L+ KNVA
Sbjct: 288 KEREWEGQSRGRLATWLRSYVGTREVDAEDLKKIIPDLREKLIAKNVAVEVAEHVCKSVE 347
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVN 392
AM +L RIL P+ +++LRDV AAK KPY +V GVN
Sbjct: 348 ASLAGKRLGTFDSLYKTVEDAMMASLRRILQPKCEVNLLRDVAAAKAAGKPYSIVLCGVN 407
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAI 452
GVGKST+LAK+ YWL Q+ SV++AA DTFR GAVEQL H R L P+F+ GY DP+
Sbjct: 408 GVGKSTSLAKITYWLQQNGNSVLLAAGDTFRHGAVEQLGVHGRCLGAPVFQLGYGTDPSA 467
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
VA A+ +A++ DVV++DTAGRMQD+E MRAL+KLI+ N PDLVLFVGEALVGN+ +
Sbjct: 468 VAAAAMAQASKQHIDVVMIDTAGRMQDHESRMRALAKLIHDNQPDLVLFVGEALVGNNGI 527
Query: 513 DQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
DQL KFNQ L D + + IDGI+LTKFDTIDDKVGAALSMVY G P++FVG GQ+
Sbjct: 528 DQLRKFNQCLVDFAPVGSRSRGIDGIVLTKFDTIDDKVGAALSMVYELGQPIVFVGVGQT 587
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DLK + + +V L+K
Sbjct: 588 YQDLKVIEPEVVVSALMK 605
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 1 MLEQLLIFTRGGLILWTC--KELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
M++ L I + G++LW C E G + + ++ LI+ LLE+R+GLA ++ D+ Y
Sbjct: 1 MIDTLSIVSDSGVVLWQCTTHETG---RRAMVNKLIQEVLLEDRAGLAQYSVDN----YQ 53
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDF 109
L+W N+ VAVY + Y+ L + +F++ Y K+T DF
Sbjct: 54 LRWVLENDARFFVVAVYPKFFKPHYMHVFLRDIATTFAKKYG-KQTAQQDF 103
>gi|346325465|gb|EGX95062.1| signal sequence receptor alpha subunit [Cordyceps militaris CM01]
Length = 644
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 223/679 (32%), Positives = 323/679 (47%), Gaps = 129/679 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER-SGLASFNYDSAGA--AY 57
ML+ I T G++LW+ + S I+ I +EE+ SG + SA A AY
Sbjct: 1 MLDTFEIITTSGVVLWS--RTYAPVNPSIINNFIIDTFIEEKHSGNVVQSAQSAAANPAY 58
Query: 58 -----TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--D 105
TLKW ELG++FV VY+ +LHL +VD L+ ++ F +Y P T +
Sbjct: 59 KTDHHTLKWAMVKELGVIFVVVYRSLLHLSWVDKLVDNIRTIFVSLYGEQVKKPHTTLVE 118
Query: 106 YSDFDEMF----RQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGG 161
FDE F R+L + + A E + N L G
Sbjct: 119 CHGFDEYFDQQIRELDESSTADPTEAIDDANSSPDSNTLSAPG----------------- 161
Query: 162 GSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNI---GAFDVSKLQ 218
RGR + N +V + SSN+ A VSK+
Sbjct: 162 ---------LTYRGRTVSN---SVSKEAASADSTPTTSRPTTPASSNLVVAKAGPVSKMS 209
Query: 219 KLRNKGGKKTDTVVSKGSNPDPKKKIT--KKNRVWD-----DSPPESKLDFTDPAGGNG- 270
+ R + K S G KK+ KK R WD D + +LD++ GG+G
Sbjct: 210 R-RARKAKHNSAPASSGDEATRPKKVASGKKGRKWDADGFADEDDDVQLDYSAQDGGDGV 268
Query: 271 ---SNIE-VEAADHGESMMDKEEVFSSDSESE-----EDEEVGKHNKPDAKKTGW----- 316
S +E V+++ G S K + E + + + ++ + KTG
Sbjct: 269 GKSSAVESVDSSTWGTSTKGKFVLRDLGDEVQGILASAEAKRAAASRAASAKTGLVGSGV 328
Query: 317 --FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
S +F+++ G L DL A+K ++D L+ KNVA
Sbjct: 329 NAISGLFRNVVGGKTLTTEDLANAMKGMEDHLLRKNVAREAAVRLCEGVEKELVGTKTGT 388
Query: 353 -------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKST 398
AME +L ++LTP S+D+LRD+ + + QR+PYV+ VGVNGVGKST
Sbjct: 389 FEGKIQTAMEASLTKMLTPTSSLDLLRDIDSITSPPVTSLRQRRPYVMSIVGVNGVGKST 448
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKD 449
NL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L QV +++KGY KD
Sbjct: 449 NLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLTELTAREGGQVELYQKGYGKD 508
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG
Sbjct: 509 AATVAKDAVTHAAQQGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVGT 568
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
D+V Q FN + S +DG +++K DT+ D VG +S+V+ + PV+FVG G
Sbjct: 569 DSVAQARNFNAAFGAVRS------LDGFIISKCDTVGDMVGTLVSLVHATNVPVVFVGVG 622
Query: 570 QSYTDLKKLNVKSIVKTLL 588
Q Y+DL+ +VK V+ LL
Sbjct: 623 QHYSDLRNFSVKWAVEKLL 641
>gi|429860493|gb|ELA35229.1| signal sequence receptor alpha subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 666
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 218/693 (31%), Positives = 337/693 (48%), Gaps = 135/693 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY--- 57
ML+ I T G++LW+ + S I+ I +EE++G AS ++ Y
Sbjct: 1 MLDTFEILTTSGVVLWS--RTYAPVNPSVINNFISDVFIEEKAGAASSQSAASNPPYKRD 58
Query: 58 --TLKWTFHNELGLVFVAVYQRILHLLYVDDLL---AMMKQSFSEIYDPKRT-------D 105
TL++TF ELG++FVAVY+ +LHL ++D L+ +K F ++Y + T +
Sbjct: 59 QHTLRYTFVKELGVIFVAVYRSLLHLSWIDKLVDXXXXIKTIFVDLYGEQLTKPHTTLVE 118
Query: 106 YSDFDEMFRQLRKEAEAR----------AEELKKSKQVTKPMNNLKKQGGQLQKGGFERG 155
+ FDE F Q +E E A+ K+ + ++ + + L G RG
Sbjct: 119 CTKFDEYFDQQMRELETTGPKGDSNISDADFAKEDETLSGNLGDEPPLPSGLHYRG--RG 176
Query: 156 SNRSGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS 215
N + GG++ N + + GV GK ++ +
Sbjct: 177 INGANGGAST--------------NESTPIITPNTSRPSTPGVVVGKPGPAAKMS----R 218
Query: 216 KLQKLRNKGGKKTDTV-VSKGSNPDP-KKKITKKNRVWD-----DSPPESKLDFTDPAGG 268
+ +K +N G + S G P P + TKK R WD D + +LD++
Sbjct: 219 RARKAQNPGAVAASSGDESSGRRPRPATRSSTKKGRKWDADGLADEEDDVQLDYSAAPRS 278
Query: 269 NGSNIEVEAADHGESMMDKEEVFSSDSESEE--------DEEVGKHN-------KPDAK- 312
S+ E E S ++ + + +++ + D+EV HN K D+
Sbjct: 279 ATSDSEAEGTAARSSALEHVDASTWGNKTSKGQFILKDLDDEV--HNILASAQSKTDSST 336
Query: 313 --KTGWFSS-------MFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------- 352
+G S +F+++ G L KADL+ A+K +++ L+ KNVA
Sbjct: 337 EASSGLIGSGLSTIGGLFRNVVGGKTLTKADLDKAMKGMEEHLLKKNVAREAAIRLCEGV 396
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PY 384
AME +L ++LTP S+D+LR++ A A RK PY
Sbjct: 397 EKELLGVKTGSFESINIKIQSAMEASLTKMLTPTSSLDLLREIDAITAPPATTLRKARPY 456
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------- 437
V+ VGVNGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L
Sbjct: 457 VISIVGVNGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTSRE 516
Query: 438 --QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
+V +++KGY KD A VA++A+ A + G DVVL+DTAGR +++ LM +L K
Sbjct: 517 GGRVELYQKGYGKDAATVARDAVSFAGQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQ 576
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PD +L VGEALVG D+V Q FN + S +DG +++K DT+ + VG +S+
Sbjct: 577 PDKILMVGEALVGTDSVAQARNFNAAFGAVRS------LDGFIISKCDTVGNMVGTLVSL 630
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+ + PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 631 VHATNVPVLFVGVGQHYSDLRNFSVKWAVEKLL 663
>gi|407925008|gb|EKG18030.1| Signal recognition particle SRP54 subunit GTPase [Macrophomina
phaseolina MS6]
Length = 658
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 211/682 (30%), Positives = 327/682 (47%), Gaps = 119/682 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ + T G++LW+ + + ID LI +EERS +A+ + ++A
Sbjct: 1 MLDSFEVLTTSGVVLWS--KTYAKVPAKTIDALINEVFIEERSEVATDDQNAAQKPTFKR 58
Query: 57 --YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD------ 108
YTLKWT + GL+FVAVYQ ++HL ++D LL ++ F+E+Y + S
Sbjct: 59 DRYTLKWTTAKDFGLIFVAVYQSLVHLTWIDKLLDNVRALFTELYKDQLRKRSTAVINCP 118
Query: 109 FDEMFRQLRKEAEARAEELKKSK-------QVTKPMNNLKKQG-GQLQKGGFERGSNRSG 160
FD+ F + +E E L+ + + T P ++ Q G + + +
Sbjct: 119 FDDYFDRQVQELEPNQGSLRTLESSVSTVAEFTPPSSSGTDQADAPPPMPGLRKPTPKPM 178
Query: 161 GGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKL 220
N D+ ++ + +S N + A G S ++
Sbjct: 179 YSDNNTSTDATPIQTPETSRPNSPAVNNHLL------AAKGGPGRQS----------RRA 222
Query: 221 RNKGGKKTDTVVSKGSNPDPKKKITK----KNRVWD-----DSPPESKLDFTDPAGGN-- 269
+ K S G + P ++ K K R WD D +++LD++ + G+
Sbjct: 223 KKKANAMASAPASSG-DESPARRPAKGAAKKGRKWDEFGAADEEDDTQLDYSTHSVGSEA 281
Query: 270 GSNIEVEAADHGE--SMMDKEEVFSSDSESEEDEEVGKHN-KPDAKKT----------GW 316
++ VEA D K E D + E DE + N K ++ ++ G
Sbjct: 282 PASSTVEAVDSSSWGKRTGKGEFVLKDLDDEMDEIIAAANAKKESSQSAPSGLVGSGLGA 341
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
+F+++ G L K DL LK ++D L+ KNVA
Sbjct: 342 IGGLFRNVVGGKTLTKEDLAKPLKGMEDHLLKKNVAREAAVRLCESVEQDLIGVKTSSFT 401
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKS 397
+ME AL +ILTP S+D+LR + + + +PYV+ VGVNGVGKS
Sbjct: 402 SVETTIRNSMESALRKILTPTNSLDLLRAIQTVNQPSALSMQSPRPYVISIVGVNGVGKS 461
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKGYEK 448
TNL+K+ Y+LLQ+K+ V++ A DTFRSGAVEQLR H RL+ V ++E+GY K
Sbjct: 462 TNLSKICYFLLQNKLRVLVVAADTFRSGAVEQLRVHVDRLKELSAREGGSVDLYERGYGK 521
Query: 449 DPAIVAKEAIQEATRNGS--DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
D A +A +A++ AT + DVVL+DTAGR +++ LM +L K L PD +L VGEAL
Sbjct: 522 DAANIAADAVKFATSADTPYDVVLIDTAGRRHNDQRLMSSLEKFAKLAKPDKILMVGEAL 581
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FN + +DG +++K DT+ D VG +SMV+ +G PV+F+
Sbjct: 582 VGTDSVAQARNFNASFG------AGRKLDGFIISKCDTVGDMVGTLVSMVHATGIPVVFL 635
Query: 567 GCGQSYTDLKKLNVKSIVKTLL 588
G GQ Y+DL++LNV L+
Sbjct: 636 GTGQHYSDLRQLNVSWATNLLM 657
>gi|320163424|gb|EFW40323.1| GTP-binding protein-PA [Capsaspora owczarzaki ATCC 30864]
Length = 631
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 185/294 (62%), Gaps = 53/294 (18%)
Query: 309 PDAKKTGWFS---SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA------------ 353
P AKK G+ S S FQ ++G L DL L+ K+ L+ KNVAA
Sbjct: 335 PVAKKAGFGSGLLSFFQGLSGNKVLTAEDLAATLEKTKEHLINKNVAADISEKLCDSVRT 394
Query: 354 --------------------MEEALVRILTPRRSIDILRDVHAAKEQR--KPYVVVFVGV 391
+EEA+ IL+P R +DILRDV A ++ +P+ +VF GV
Sbjct: 395 NLVGKTMPSFTTITSTVTKSLEEAVTSILSPNRRVDILRDVLAKRQDPSGRPFTIVFCGV 454
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------- 437
NGVGKSTNLAK+ YWL+Q+ +S+++AACDTFR+GAVEQLR H R L
Sbjct: 455 NGVGKSTNLAKICYWLVQNDISILIAACDTFRAGAVEQLRVHTRCLNDLQRSNGKLGPND 514
Query: 438 --QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
V ++EKGY KD A +A +A+ DVVLVDTAGRMQDNEPLMR+L+KL+ N
Sbjct: 515 PDSVMLYEKGYGKDAAAIAFDAVNYGRDQRRDVVLVDTAGRMQDNEPLMRSLAKLVKTNE 574
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
PDLVLFVGEALVGN+AVDQL +FNQ LAD S S NP LIDGI+LTKFDTIDDKV
Sbjct: 575 PDLVLFVGEALVGNEAVDQLKRFNQSLADFSESTNPHLIDGIVLTKFDTIDDKV 628
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 23/178 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERS-GLASFNYDSAGAAYTL 59
MLE + IFTRGG++LW+ + A+ + I+ LI S +E+R+ F +D + L
Sbjct: 1 MLELVTIFTRGGVVLWSRQSGAVAVSPTVINALISSAFIEKRAVSDKQFVHDH----FAL 56
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSE--------------IYDPKRTD 105
KW NEL LVFV V+Q+ L L YVD+LL+ M SF ++ P
Sbjct: 57 KWAIVNELDLVFVVVHQKALQLNYVDELLSSMATSFVNTNGDDVRAFAAGLPLFKPSGKH 116
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGS 163
DFD F + + R EE S ++ K M + ++ + QK G +S S
Sbjct: 117 VVDFDARFDTIWEGVMQRYEE---SLRIPKAMKSF-EESKKAQKSGIASPEPKSPSAS 170
>gi|115386444|ref|XP_001209763.1| hypothetical protein ATEG_07077 [Aspergillus terreus NIH2624]
gi|114190761|gb|EAU32461.1| hypothetical protein ATEG_07077 [Aspergillus terreus NIH2624]
Length = 645
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 218/693 (31%), Positives = 309/693 (44%), Gaps = 152/693 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSA---GAAY 57
MLE I T G++LW+ + +++LI +EER L + S Y
Sbjct: 1 MLEAFEILTTSGVVLWSKSYA--PVGAHVVNSLINDVFIEERVQLQATTNTSPIYKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLR 117
TLKW E L+FVAVYQ +LHL ++D LL + F ++Y D++
Sbjct: 59 TLKWKRVKEFNLIFVAVYQSLLHLGWIDKLLDNISTLFIDLYK---------DQL----- 104
Query: 118 KEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGF------------------------- 152
K + AR E K + + L+ G + GF
Sbjct: 105 KSSRARIVEYPFEKYFDQQVRELEDNSGAITSEGFVAETEDKKDPFVSSDNGGPPPPHTP 164
Query: 153 --ERGSNRSGGGSANDDGDS-----DNMR----GRKLENGHSNVGNVEIEESRVTGVANG 201
R ++ G D + D R G ++ S G RV+ A
Sbjct: 165 HLLRAQRQAALGVPTSDDSTPPQTPDTSRPSTPGSQILTAKSGPGG------RVSRRARK 218
Query: 202 KENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPP 256
N S+ + + D + + KGGK R WD D
Sbjct: 219 AANASAPVSSGDETSRKGKTAKGGKTM--------------------RKWDADGLADEDD 258
Query: 257 ESKLDFTDPAGGN---GSNIEVEAADHGESMMDKEEVFSSD--SESEEDEEVGKHNKPDA 311
+ LD++ PA + +E + D K + D E E + K A
Sbjct: 259 GTVLDYSAPANDDEAAAPTVEAVSQDSWGRRTGKGQFVLKDLGDEVHSILENADNEKAKA 318
Query: 312 KKTGWFSSMFQSIAGKAN-------LDKADLEPALKALKDRLMTKNVA------------ 352
+G+ S F +I G L +ADLE LK ++D L+ KNVA
Sbjct: 319 SSSGFVGSGFNAIGGLLRNIVGGKVLTEADLEKPLKTMEDHLLKKNVAREAAVRLCDGVK 378
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAA------KEQRKPYVV 386
AME AL +ILTP S+D+LR++ A ++ +PYV+
Sbjct: 379 RELVGKKTANFQSVDAALQLAMESALRKILTPTSSLDLLREIDAVSSPTTKQQSPRPYVI 438
Query: 387 VFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL--------- 437
VGVNGVGKSTNL K+ Y+LLQ+ V++AACDTFRSGAVEQLR HAR L
Sbjct: 439 SIVGVNGVGKSTNLGKICYFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENV 498
Query: 438 -QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+V ++EKGY KD A VAK+A++ N DVVL+DTAGR +++ LM +L K P
Sbjct: 499 GEVELYEKGYGKDAANVAKDAVEYGAANKFDVVLIDTAGRRHNDQRLMSSLEKFAKFAKP 558
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D + VGEALVG D+V Q FNQ + +DG +++K DT+ D VG +SMV
Sbjct: 559 DKIFMVGEALVGTDSVMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMV 612
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 613 HATGIPIVFLGVGQHYGDLRGLSVPWAVNLLMK 645
>gi|67473872|ref|XP_652685.1| Signal recognition particle receptor alpha subunit [Entamoeba
histolytica HM-1:IMSS]
gi|56469558|gb|EAL47298.1| Signal recognition particle receptor alpha subunit, putative
[Entamoeba histolytica HM-1:IMSS]
gi|449702761|gb|EMD43337.1| signal recognition particle receptor alpha subunit, putative
[Entamoeba histolytica KU27]
Length = 488
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 179/239 (74%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ + E L RI+TP ID+ +++ K + Y +VF+GVNGVGKST+L+K+A WL
Sbjct: 250 IQGVTEVLTRIMTPTSPIDVAKEISEKKANGEVYTMVFLGVNGVGKSTSLSKMACWLTSL 309
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
VM+AACDTFR+GAV+QL HA++L + ++EKGY+ DP+ +A+ A++ A +G DV+L
Sbjct: 310 NYKVMIAACDTFRAGAVDQLAVHAQKLGITLYEKGYDTDPSAIARNALKRAKEDGYDVLL 369
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGRMQ N+ LM+A++KL++ DLVLFV EALVGNDAV+QL+ FN+ + D + +
Sbjct: 370 VDTAGRMQGNDALMKAIAKLVHSAQTDLVLFVAEALVGNDAVNQLTTFNRYIIDYAPNKQ 429
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ ++GI+LTKFDTIDDKVGAA+S+ Y +G P++FVG GQ YTDLK L++ ++ TLLK
Sbjct: 430 SKGVNGIILTKFDTIDDKVGAAISLTYCTGIPILFVGSGQHYTDLKLLDIDELISTLLK 488
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 2 LEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKW 61
+E++ I T GG++L+ + L+G PI+ +I+ LL +R+G + ++ Y ++W
Sbjct: 1 MEEIDIITTGGIVLFKWGQ--GKLRGEPINAVIKDHLLADRTGESKAIVEN----YMIRW 54
Query: 62 TFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY-SDFDEMFRQLRKEA 120
NE + + V+ + + + Y+D + M + F E Y P +T S + + KE
Sbjct: 55 LSDNETSTIILVVHVKTIKVDYIDLFIKEMMKKFKEQYLPSKTIVKSVMNTTAEETLKEC 114
Query: 121 EARAEELKKSKQVTK 135
+ R ++ K +K++ K
Sbjct: 115 QERCKQDKANKRMRK 129
>gi|121703808|ref|XP_001270168.1| signal sequence receptor alpha subunit, putative [Aspergillus
clavatus NRRL 1]
gi|119398312|gb|EAW08742.1| signal sequence receptor alpha subunit, putative [Aspergillus
clavatus NRRL 1]
Length = 654
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 224/688 (32%), Positives = 317/688 (46%), Gaps = 133/688 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
MLE I T GL+LW+ + +++LI +EE+ + S N ++ +
Sbjct: 1 MLEAFEILTTSGLVLWSKSYA--PVGAHVVNSLINDVFIEEK--VRSQNQATSSVSPVYK 56
Query: 57 ---YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMF 113
YTLKW + L+FVAVYQ +LHL ++D LL + F ++Y D++
Sbjct: 57 KEKYTLKWKRVKDFDLIFVAVYQSLLHLGWIDKLLDNIATIFIDLYK---------DQL- 106
Query: 114 RQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSN-RSGGGSANDDGDSDN 172
K AR E + + L+ G L G + R ++D+G
Sbjct: 107 ----KGTRARIAEYPFDNYFDQQVRELENNAGALPSDTLAAGVDERKNPLVSSDNGGPPP 162
Query: 173 MRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQK------LRNKGG- 225
L + N E + S G A E+T + + D+S+ L KGG
Sbjct: 163 PPIPGLVKAN----NHEAQRSVAQGAAISDESTPPH--SPDISRSSTPVSSHILTAKGGP 216
Query: 226 ------------------KKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDF 262
D + KG P K KK R WD D LD+
Sbjct: 217 AGRSSRRARKAANASANASSGDENIRKGKTP----KSGKKMRKWDADGYADEDDGKVLDY 272
Query: 263 TDPAGGNGSNIEVEAADHGESM---MDKEEVFSSDSESEED---EEVGKHNKPDAKKTGW 316
+ PA G+ + V A ES K + D E E + A TG
Sbjct: 273 SAPAHGDEVSAPVVEAVAQESWGRRTGKGQFVLKDLGDEVHSILENADQEKAKAASSTGL 332
Query: 317 FSS-------MFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
S F++I G L +ADLE LKA++D L+ KNVA
Sbjct: 333 VGSGVNAIGGFFRNIVGGKVLTEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVQRELVG 392
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVHAAK------EQRKPYVVVFVGV 391
AME +L +ILTP S+D+LR++ + + +PYV+ VGV
Sbjct: 393 KKTGNFQSVDAALRSAMESSLRKILTPTSSLDLLREIETVRSPSSKGQAPRPYVISIVGV 452
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPI 441
NGVGKSTNL+K+ Y+LLQ+ V++AACDTFRSGAVEQLR HAR L +V +
Sbjct: 453 NGVGKSTNLSKICYFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARETAGEVEL 512
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+EKGY KD A VAK+A++ N DVVL+DTAGR +++ LM +L K PD +
Sbjct: 513 YEKGYGKDAANVAKDAVEYGAANDFDVVLIDTAGRRHNDQRLMSSLEKFAKFAKPDKIFM 572
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
VGEALVG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G
Sbjct: 573 VGEALVGTDSVMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGI 626
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++F+G GQ Y DL+ L+V V L+K
Sbjct: 627 PIVFLGVGQHYGDLRGLSVPWAVNLLMK 654
>gi|167376693|ref|XP_001734103.1| signal recognition particle receptor alpha subunit [Entamoeba
dispar SAW760]
gi|165904558|gb|EDR29773.1| signal recognition particle receptor alpha subunit, putative
[Entamoeba dispar SAW760]
Length = 488
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 178/239 (74%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ + E L RI+TP ID+ +++ K Y +VF+GVNGVGKST+L+K+A WL
Sbjct: 250 IQGVTEVLTRIMTPTSPIDVAKEISEKKANGDVYTMVFLGVNGVGKSTSLSKMACWLTSL 309
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
VM+AACDTFR+GAV+QL HA++L + ++EKGY+ DP+ +A+ A++ A +G DV+L
Sbjct: 310 NYKVMIAACDTFRAGAVDQLAVHAQKLGITLYEKGYDTDPSAIARNALKRAKEDGYDVLL 369
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGRMQ N+ LM+A++KL++ DLVLFV EALVGNDAV+QL+ FN+ + D + +
Sbjct: 370 VDTAGRMQGNDALMKAIAKLVHSAQTDLVLFVAEALVGNDAVNQLTTFNRYIIDYAPNKQ 429
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ ++GI+LTKFDTIDDKVGAA+S+ Y +G P++FVG GQ YTDLK L++ ++ TLLK
Sbjct: 430 SKGVNGIILTKFDTIDDKVGAAISLTYCTGIPILFVGSGQHYTDLKLLDIDELISTLLK 488
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 2 LEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKW 61
+E++ I T GG++L+ + L+G PI+T+I+ LL +R+G + ++ Y ++W
Sbjct: 1 MEEIDIITTGGIVLFKWGQ--GKLRGEPINTVIKDHLLADRTGESKAIVEN----YMIRW 54
Query: 62 TFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY-SDFDEMFRQLRKEA 120
NE + + V+ + + + Y+D + M + F E Y P +T S + + KE
Sbjct: 55 LSDNETSTIIMVVHVKTIKVDYIDLFIKEMMKKFKEQYLPNKTIVKSIMNTTVEETLKEC 114
Query: 121 EARAEELKKSKQVTK 135
+ R ++ K +K++ K
Sbjct: 115 QERTKQEKANKKMRK 129
>gi|399217145|emb|CCF73832.1| unnamed protein product [Babesia microti strain RI]
Length = 524
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 212/363 (58%), Gaps = 54/363 (14%)
Query: 260 LDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSS 319
LDF++ + N ++ A + +D E S DS EE E + T ++
Sbjct: 179 LDFSEKVQSD--NGQMGQAINTSQYIDSE---SDDSYCEEKESIF---------TRYYRK 224
Query: 320 M---FQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
+ QS G L D++ A+ LK L ++NV+
Sbjct: 225 VADSLQSYMGNKTLTIEDVDKAMVELKSLLASRNVSTDVCEMLCESVKKGLIGKTTKRFV 284
Query: 353 --------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
A+ A+ ++LT +IDI + K Q Y + F GVNGVGKST LAKV
Sbjct: 285 SVNKAINDALCNAVTQVLTYSGTIDIFAEATRHKNQNLLYTIAFCGVNGVGKSTTLAKVC 344
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
Y+L V++AACDTFRSGAVEQL+ HA L V +F++GY K+P +AK AI A +N
Sbjct: 345 YFLKNKGFKVLLAACDTFRSGAVEQLKIHANCLNVEVFDRGYGKNPDEIAKSAISYAEQN 404
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DVVL+DTAGRMQDNEPLM++L+KL+++NNP + FVGEALVGND VDQL KFN
Sbjct: 405 SYDVVLIDTAGRMQDNEPLMKSLAKLVHVNNPSRIFFVGEALVGNDGVDQLEKFNNCF-- 462
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ + IDGI+LTKFDT+D+KVGAALSM Y++G P++FVG GQ+Y +L+ LN S+V
Sbjct: 463 ---KHSKRGIDGIILTKFDTVDNKVGAALSMSYIAGKPIVFVGTGQNYNNLRPLNSASVV 519
Query: 585 KTL 587
K+L
Sbjct: 520 KSL 522
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ + FTR GLILW ++ ++L I+ LI+ LL E+S L + +D G Y +
Sbjct: 1 MIDAAIAFTREGLILWC--QIYDSLDLKAINKLIQDYLLSEKSNLDTVYFD--GIYY--R 54
Query: 61 WTFHNELGLVFVAVYQRIL----HLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
W+ NE ++FV ++ +L L+++D+ K+ K +++ DF
Sbjct: 55 WSMINEYNIIFVLSHRALLPSDKTKLFINDITRSFKKYIKRRVTSKTLLILESSEFEDFS 114
Query: 111 EMFRQLRKEAEARAEEL---KKSKQVTKPMNNLKK 142
F ++ + + KS+ NNL K
Sbjct: 115 NEFTKIISNSNRLTSNITGVNKSQTAKSETNNLDK 149
>gi|340516435|gb|EGR46684.1| predicted protein [Trichoderma reesei QM6a]
Length = 657
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 221/687 (32%), Positives = 328/687 (47%), Gaps = 132/687 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSG-LASFNYDSAGA---- 55
ML+ + T G++LW+ + S ++ I +EE++G +A + SA
Sbjct: 1 MLDAFEVLTTSGVVLWSRSYA--PVSPSIVNNFIADTFIEEKTGSIAPSDSQSAATNPAY 58
Query: 56 ---AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-------D 105
+TLKWTF ELGL+FV VY+ +LHL +VD L+ +K F E+Y + T +
Sbjct: 59 RSDQHTLKWTFVKELGLIFVVVYRSLLHLSWVDKLVDNIKTIFVELYGEQLTKPHTTLVE 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQK--GGFERGSNRSGGGS 163
F E F Q + +EL KS V +N + QG G RG +GG +
Sbjct: 119 CHSFGEYFDQ-------QLQELDKSSTVGS-INPIDDQGSSRPSAAGLTYRGRTINGGAA 170
Query: 164 ANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
A D S + + V GV K A V+K+ + K
Sbjct: 171 AAQDTTSAD---------STPVPTPNASRPSTPGVVVAK--------AGPVAKMSRRARK 213
Query: 224 GGKKTDTVVSKG-----SNPDPKK-KITKKNRVW------DDSPPESKLDFTDPAGGNGS 271
S G SN K K TKK R W D+ + +LD++ P+ + S
Sbjct: 214 AHNSGSAPASSGDEALSSNRQKKSGKATKKGRKWNAEGFADEEDDDVQLDYSRPSLTSDS 273
Query: 272 NIE----------VEAADHGESMMDK----------EEVFSSDSESEEDEEVGKHNKPDA 311
E V+++ G + K ++ +S + + K
Sbjct: 274 EAEAVGRSSALDAVDSSTWGSTSKGKFILKDLGDEVHDILASAQAQKAQKSARSETKTGL 333
Query: 312 KKTG--WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
+G S +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 334 LGSGVNAISGLFRNVVGGKTLTKEDLDKAMKGMEEHLLRKNVAREAAVRLCEGVEKELIG 393
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVVVFVG 390
AME +L ++LTP S+D+LR++ + A RK PYV+ VG
Sbjct: 394 VKTGNFESINAKIQSAMESSLTKMLTPTSSLDLLREIDSITSPPATSLRKARPYVISIVG 453
Query: 391 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPI 441
VNGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +
Sbjct: 454 VNGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGRVEL 513
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
++KGY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L
Sbjct: 514 YQKGYGKDAAAVAKDAVNHAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILM 573
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
VGEALVG D+V Q FN + + +DG +++K DT+ D VG +S+V+ +
Sbjct: 574 VGEALVGTDSVAQARNFNAAFG------SDRALDGFIISKCDTVGDMVGTLVSLVHATNV 627
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 628 PVVFVGVGQHYSDLRNFSVKWAVEKLL 654
>gi|224009369|ref|XP_002293643.1| signal recognition particle-like protein [Thalassiosira pseudonana
CCMP1335]
gi|220971043|gb|EED89379.1| signal recognition particle-like protein [Thalassiosira pseudonana
CCMP1335]
Length = 368
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 199/305 (65%), Gaps = 40/305 (13%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G+FS++ + L K+DL+P LK ++ L +KNVA
Sbjct: 72 GFFSNLLST---NRPLTKSDLDPPLKQMQQLLTSKNVAPSTAQAICEVVERQLLGKKVGT 128
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
A+E+A+ RIL P + + K + PY +V +G+NGVGKST+LAK
Sbjct: 129 LVGVKRAVRHALEDAVERILCPE--LGGIGGRAEIKRGKSPYTIVMIGINGVGKSTSLAK 186
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEAT 462
+AY+L ++ + ++AACDTFRSGAVEQL HA L +P++ +GY KDP+ VAK AI +AT
Sbjct: 187 IAYYLQSNQCNPLLAACDTFRSGAVEQLSVHASCLSLPLYHQGYAKDPSTVAKAAISKAT 246
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
+G+DVVL+DTAGRMQ+N PLM+AL+KL+ NPDLVLFV EALVGND +DQL+ F +
Sbjct: 247 EDGNDVVLIDTAGRMQNNVPLMKALAKLVTETNPDLVLFVCEALVGNDGMDQLTMFQKA- 305
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
L+S + +LIDGI+LTKFDT+ DKVGAAL++ +++G P+ F G GQ Y LK L+V
Sbjct: 306 --LTSGGHTRLIDGIVLTKFDTVSDKVGAALTLTHLTGVPIAFCGTGQKYNHLKPLSVPF 363
Query: 583 IVKTL 587
++++L
Sbjct: 364 VIQSL 368
>gi|389646963|ref|XP_003721113.1| signal recognition particle receptor subunit alpha [Magnaporthe
oryzae 70-15]
gi|351638505|gb|EHA46370.1| signal recognition particle receptor subunit alpha [Magnaporthe
oryzae 70-15]
gi|440467039|gb|ELQ36280.1| signal recognition particle receptor subunit alpha [Magnaporthe
oryzae Y34]
gi|440488957|gb|ELQ68641.1| signal recognition particle receptor subunit alpha [Magnaporthe
oryzae P131]
Length = 661
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 215/686 (31%), Positives = 322/686 (46%), Gaps = 126/686 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLAS--------FNYDS 52
ML+ I T G++LW+ + L + S I++ I +EE++G S N
Sbjct: 1 MLDTFEIVTTTGVVLWS-RTL-TPVSPSVINSFISDVFIEEKAGAGSTRESSSASSNPPY 58
Query: 53 AGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-------D 105
++TL+W F ELGL+FVAVY+ + HL ++D L+ ++ F +Y + T D
Sbjct: 59 RTDSHTLRWAFVKELGLIFVAVYRSLFHLSWIDKLVDNIRAIFVNLYGEQLTKPNTTIVD 118
Query: 106 YSDFDEMFRQLRKEAE----ARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGG 161
+ FD+ F Q KE E +RA E + + NL ++ G NR+G
Sbjct: 119 CAGFDDYFNQQVKELEGAKDSRASETARPLEDAFVSGNLGEEPPLPSAPGLHHRGNRAGA 178
Query: 162 GSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSN-IGAFDVSKLQKL 220
+ + DS + + TG T +N + L K+
Sbjct: 179 AAQDKSVDSSPV-------------------ASPTGSRPATPGTGTNHLLVAKAGPLAKM 219
Query: 221 RNKGGKKTDTVVSKGSNPDPKKKITKKN-----RVWDD--------------SPPESKLD 261
+ +K + + G P +K K R WD S + D
Sbjct: 220 SRRA-RKAQSANTSGDETSPARKAKAKATGKKGRKWDADGLATEDDDVQLDYSQTNAASD 278
Query: 262 FTDPAGGNGSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAKKT 314
D G + + EV+AA G K +EV S + + +K DA
Sbjct: 279 IDDGVGRSSALEEVDAATWGTKTKGKFVLRDLGDEVHSILESEKNKAQANSSSKQDAGLI 338
Query: 315 G----WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------ 352
G +F+++ G L + DL+ A+K ++D L+ KNVA
Sbjct: 339 GSSLSTIGGLFRNVVGGKVLTREDLDKAMKGMEDHLLRKNVAREAAVRLCEGVEKELVGV 398
Query: 353 --------------AMEEALVRILTPRRSIDILRDVHAAKE-------QRKPYVVVFVGV 391
AME +L R+LTP S+D+LR++ + + + +PYV+ VGV
Sbjct: 399 KTGSFESINTRVQAAMEASLTRMLTPTSSLDLLREIDSVTQPSVTSLRKPRPYVMSIVGV 458
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIF 442
NGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L QV ++
Sbjct: 459 NGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGQVELY 518
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+KGY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L V
Sbjct: 519 QKGYGKDAAAVAKDAVSHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMV 578
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
GEALVG D+V Q FN S +DG +++K DT+ VG +S+V+ + P
Sbjct: 579 GEALVGTDSVAQARNFNAAFGSGRS------LDGFIISKCDTVGTMVGTLVSIVHATNVP 632
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 633 VLFVGVGQHYSDLRNFSVKWAVEKLL 658
>gi|325096521|gb|EGC49831.1| signal sequence receptor alpha subunit [Ajellomyces capsulatus H88]
Length = 748
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 215/650 (33%), Positives = 308/650 (47%), Gaps = 126/650 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER------SGLASFNYDSAG 54
ML+ I T G++LW+ + I++LI +EE+ SG + Y
Sbjct: 1 MLDSFEIITSSGVVLWSRSYA--PVGAHVINSLINDVFIEEKFQQEAGSGTVAPRYRKE- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSD 108
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K F EIY+ + R
Sbjct: 58 -KYTLKWKRAKDLGLIFVAVYQSLLHLTWIDELLENIKTIFVEIYNEQLKKPNSRIIEYR 116
Query: 109 FDEMFRQLRKEAEARAEEL----------KKSKQVTKPMNNLKKQGGQLQKGGFERGSNR 158
FD+ F Q KE E+ A + +K + + N +R + R
Sbjct: 117 FDKYFDQQVKELESAAGKAVEGSHSLLIEEKKDTLVEADNGGPPPPPIPGLLPAQRHAAR 176
Query: 159 SGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
+ S N+ S + + + R + A N+S+N+ +
Sbjct: 177 AVANS-NESSPSQTPETSRPATPNHIITAKAGPGGRTSRRARKAANSSANVSS------- 228
Query: 219 KLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSNI 273
G+ T + K N K KK R WD D LD++ P NGS
Sbjct: 229 ------GEDT---IKKAKNA---KSAVKKMRKWDSEGFADEDNGEILDYSAP-NVNGSES 275
Query: 274 E------VEAADH---------GESMMDK--EEVFS--SDSESEEDEEVGKHNKPDAKKT 314
E VEA D G+ ++ +EV S D+++ +D N
Sbjct: 276 EEVAGPPVEAVDQNSWGTKTKKGQFVLKDLGDEVHSILQDADAAKDR-ASMSNGVVGSSL 334
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 335 GAISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCDGVEQELIGKKTGS 394
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A ++++R+PYV+ VGVNGVGK
Sbjct: 395 FQSIDAALRAAMESSLRKILTPTSSLDLLREIEAVTSPSNSQKRRRPYVISIVGVNGVGK 454
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGY 446
STNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY
Sbjct: 455 STNLSKICFFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGY 514
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ A N DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 515 GKDAANVAKDAVAYAAMNNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 574
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
VG D+V Q FNQ + +DG +++K DT+ D VGA L V
Sbjct: 575 VGTDSVMQARNFNQAFG------TGRKLDGFIMSKCDTVGDMVGALLFHV 618
>gi|171683961|ref|XP_001906922.1| hypothetical protein [Podospora anserina S mat+]
gi|170941941|emb|CAP67593.1| unnamed protein product [Podospora anserina S mat+]
Length = 646
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 213/691 (30%), Positives = 321/691 (46%), Gaps = 151/691 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----- 55
ML+ I T G++LW+ A+ S ++ I +EE+S +A ++ A
Sbjct: 1 MLDTFEILTTSGVVLWS--RTYAAVSPSVVNNFINDIFIEEKSSVAGAKNGASAAENPPY 58
Query: 56 ---AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--D 105
+TL+WTF ELG++FVAVY+ +LH+ ++D L+ ++ F +Y P T +
Sbjct: 59 KHDQHTLRWTFEKELGIIFVAVYRSLLHISWIDQLVDNIRAIFVGLYRDELTKPNTTIVE 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
FD+ F Q +E L++ GG+ + S + +
Sbjct: 119 CLTFDQYFDQQLRE--------------------LEQAGGKSDTRALK--SEVLSEDTGD 156
Query: 166 DDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKL-------- 217
+ N RG++ + GV+ G S G S L
Sbjct: 157 EPPSPPNNRGQQA----------------LRGVSPGSSPNVSRPGTPSASHLLVAKAGPG 200
Query: 218 QKLRNKGGKKTDTVVSKGSNPD------PKKKITKKNRVWD-----DSPPESKLDFT--- 263
KL + K +T + S+ D K K K+ R WD D +LD++
Sbjct: 201 AKLSRRARKMQNTTSAPASSGDEGPARKAKAKPVKRGRKWDADGLADEDDGVQLDYSVPT 260
Query: 264 -------DPAGGNGSNIEVEAADHGESMMDK-------EEVFSS-DSESEEDEEVGKHNK 308
+P G+ EV+A+ G K +EV S + K +
Sbjct: 261 LTSDSEAEPGARPGAVEEVDASTWGSQTKGKFVLRDLGDEVNSILADADAKKNAATKTDA 320
Query: 309 PDAKKTGWFSS---MFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------- 352
P S+ +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 321 PSGLVGTGLSAIGGLFRNVVGGKVLTKQDLDKAMKGMEEHLLKKNVAREAAIRLCEGVEK 380
Query: 353 -------------------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVV 386
AME +L ++LTP S+D+LR++ A A RK PYV+
Sbjct: 381 ELVGVKTGSFESINARIQKAMEASLTKMLTPTSSLDLLREIDAITSPSATSLRKARPYVM 440
Query: 387 VFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL--------- 437
VGVNGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L
Sbjct: 441 SIVGVNGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGG 500
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
QV +++KGY KD A VAK+A+ A + G +VVL+DTAGR +++ LM +L K PD
Sbjct: 501 QVELYQKGYGKDAATVAKDAVAYAAQEGFNVVLIDTAGRRHNDQRLMSSLEKFAKFAQPD 560
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+L V ALVG D+V Q FN S +DG +++K DT+ D VG +S+V+
Sbjct: 561 KILMV--ALVGTDSVAQARNFNAAFGSGRS------LDGFIISKCDTVGDMVGTLVSIVH 612
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 613 ATNVPVLFVGVGQHYSDLRNFSVKWAVEKLL 643
>gi|240280412|gb|EER43916.1| signal sequence receptor alpha subunit [Ajellomyces capsulatus
H143]
Length = 823
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 213/649 (32%), Positives = 307/649 (47%), Gaps = 126/649 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER------SGLASFNYDSAG 54
ML+ I T G++LW+ + I++LI +EE+ SG + Y
Sbjct: 1 MLDSFEIITSSGVVLWSRSYA--PVGAHVINSLINDVFIEEKFQQEAGSGTVAPRYRKE- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSD 108
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K F EIY+ + R
Sbjct: 58 -KYTLKWKRAKDLGLIFVAVYQSLLHLTWIDELLENIKTIFVEIYNEQLKKPNSRIIEYR 116
Query: 109 FDEMFRQLRKEAEARAEEL----------KKSKQVTKPMNNLKKQGGQLQKGGFERGSNR 158
FD+ F Q KE E+ A + +K + + N +R + R
Sbjct: 117 FDKYFDQQVKELESAAGKTVEGSPSLLIEEKKDTLVEADNGGPPPPPIPGLLPAQRHAAR 176
Query: 159 SGGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
+ S N+ S + + + R + A N+S+N+ +
Sbjct: 177 AVANS-NESSPSQTPETSRPATPNHIITAKAGPGGRTSRRARKAANSSANVSS------- 228
Query: 219 KLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSNI 273
G+ T + K N K KK R WD D LD++ P NGS
Sbjct: 229 ------GEDT---IKKAKNA---KSAVKKMRKWDSEGFADEDNGEILDYSAP-NVNGSES 275
Query: 274 E------VEAADH---------GESMMDK--EEVFS--SDSESEEDEEVGKHNKPDAKKT 314
E VEA D G+ ++ +EV S D+++ +D N
Sbjct: 276 EEVAGPPVEAVDQNSWGTKTKKGQFVLKDLGDEVHSILQDADAAKDR-ASMSNGVVGSSL 334
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 335 GAISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCDGVEQELIGKKTGS 394
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A ++ +R+PYV+ VGVNGVGK
Sbjct: 395 FQSIDAALRAAMESSLRKILTPTSSLDLLREIEAVTSPSNSQNRRRPYVISIVGVNGVGK 454
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGY 446
STNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY
Sbjct: 455 STNLSKICFFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGY 514
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ A N DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 515 GKDAANVAKDAVAYAAMNNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 574
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
VG D+V Q FNQ + +DG +++K DT+ D VGA ++
Sbjct: 575 VGTDSVMQARNFNQAFG------TGRKLDGFIMSKCDTVGDMVGALVTF 617
>gi|336465361|gb|EGO53601.1| hypothetical protein NEUTE1DRAFT_150870 [Neurospora tetrasperma
FGSC 2508]
gi|350295660|gb|EGZ76637.1| SRP54-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 657
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 217/683 (31%), Positives = 328/683 (48%), Gaps = 124/683 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ A+ + ++ I +EE+S +A ++ +A
Sbjct: 1 MLDTFEILTTSGVVLWS--RTYAAVSPAVVNNFISDVFIEEKSAVAGTKDGASASANPPY 58
Query: 57 ----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--- 104
+TL+W+F ELG++FVAVY+ +LHL ++D L+ ++ F +Y P T
Sbjct: 59 KHDQHTLRWSFEKELGIIFVAVYRSLLHLSWIDKLVDNIRTIFVNLYGDQLKKPNVTLIQ 118
Query: 105 -----DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRS 159
DY FD+ ++L K + ++ Q ++L L G RG
Sbjct: 119 CAKFDDY--FDQQLQELEKTGSKSDSKDVRAFQDEALSDDLSDMPPPLP--GLVRGGRAP 174
Query: 160 GGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVT--GVANGKENTSSNIGAFDVSKL 217
+ + GDSD + SR T VA+ G +
Sbjct: 175 SNTNTSKQGDSDF--------------DTSPNTSRSTTPAVASHLLVAKPGPGGKMSRRA 220
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFT--------- 263
+KL+N + + S K K+ KK R WD D + +LDF+
Sbjct: 221 RKLQNSAPASSG---DEASVKRTKAKLAKKGRKWDADGLADEEDDVQLDFSASKATSDSE 277
Query: 264 DPAGGNGSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
AG + EV+A+ G + K +EV S + +E K + P
Sbjct: 278 TEAGRRPAIEEVDASTWGSTTKGKFVLRDLGDEVHSILASAEAKNSASKTDAPTGLVGTG 337
Query: 317 FSS---MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
S+ +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 338 LSAIGGLFRNVVGGKVLTKEDLDKAMKGMEEHLLKKNVAREAAVRLCEGVEKELIGVKTG 397
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVVVFVGVNGV 394
AME +L ++LTP S+D+LR++ + A RK PYV+ VGVNGV
Sbjct: 398 SFESINTRIQKAMEVSLTKMLTPTSSLDLLREIDSITSPPATSLRKARPYVMSIVGVNGV 457
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKG 445
GKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++KG
Sbjct: 458 GKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTQREGGKVELYQKG 517
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
Y KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEA
Sbjct: 518 YGKDAAAVAKDAVAFAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEA 577
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
LVG D+V Q FN S +DG +++K DT+ D VG +S+V+ + PV+F
Sbjct: 578 LVGTDSVAQAKNFNASFGAGRS------LDGFIISKCDTVGDMVGTIVSIVHATNVPVLF 631
Query: 566 VGCGQSYTDLKKLNVKSIVKTLL 588
VG GQ Y+DL+ +VK V+ LL
Sbjct: 632 VGVGQHYSDLRNFSVKWAVEKLL 654
>gi|164428471|ref|XP_001728457.1| hypothetical protein NCU11187 [Neurospora crassa OR74A]
gi|157072159|gb|EDO65366.1| hypothetical protein NCU11187 [Neurospora crassa OR74A]
Length = 659
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 216/683 (31%), Positives = 328/683 (48%), Gaps = 122/683 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ A+ + ++ I +EE+S +A ++ +A
Sbjct: 1 MLDTFEILTTSGVVLWS--RTYAAVSPAVVNNFISDVFIEEKSAVAGTKDGASASANPPY 58
Query: 57 ----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--- 104
+TL+W+F ELG++FVAVY+ +LHL ++D L+ ++ F +Y P T
Sbjct: 59 KHDQHTLRWSFEKELGIIFVAVYRSLLHLSWIDKLVDNIRTIFVNLYGDQLKKPNVTLIQ 118
Query: 105 -----DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRS 159
DY FD+ ++L K + ++ Q ++L L G RG
Sbjct: 119 CAKFDDY--FDQQLQELEKTGSKSDSKDVRAFQDEALSDDLSDMPPPLP--GLVRGGRVP 174
Query: 160 GGGSANDDGDSDNMRGRKLENGHSNVGNVEIEESRVT--GVANGKENTSSNIGAFDVSKL 217
+ + GDSD + SR T VA+ G +
Sbjct: 175 SNTNTSKQGDSDF--------------DTSPNASRPTTPAVASHLLVAKPGPGGKMSRRA 220
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFT--------- 263
+KL+N + + S K K+ KK R WD D + +LDF+
Sbjct: 221 RKLQNTNSAPASSG-DEASVKRTKAKLAKKGRKWDADGLADEEDDVQLDFSASKATSDSE 279
Query: 264 DPAGGNGSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAKKTGW 316
AG + EV+A+ G + K +EV S + +E + + P
Sbjct: 280 TEAGRRSAVEEVDASTWGSTTKGKFVLRDLGDEVHSILASAEAKNSASRTDAPTGLVGTG 339
Query: 317 FSS---MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
S+ +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 340 LSAIGGLFRNVVGGKVLTKEDLDKAMKGMEEHLLKKNVAREAAVRLCEGVEKELIGVKTG 399
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVVVFVGVNGV 394
AME +L ++LTP S+D+LR++ + A RK PYV+ VGVNGV
Sbjct: 400 SFESINTRIQKAMEVSLTKMLTPTSSLDLLREIDSITSPPATSLRKARPYVMSIVGVNGV 459
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKG 445
GKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++KG
Sbjct: 460 GKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTQREGGKVELYQKG 519
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
Y KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEA
Sbjct: 520 YGKDAAAVAKDAVAFAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEA 579
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
LVG D+V Q FN S +DG +++K DT+ D VG +S+V+ + PV+F
Sbjct: 580 LVGTDSVAQAKNFNASFGAGRS------LDGFIISKCDTVGDMVGTIVSIVHATNVPVLF 633
Query: 566 VGCGQSYTDLKKLNVKSIVKTLL 588
VG GQ Y+DL+ +VK V+ LL
Sbjct: 634 VGVGQHYSDLRNFSVKWAVEKLL 656
>gi|116193091|ref|XP_001222358.1| hypothetical protein CHGG_06263 [Chaetomium globosum CBS 148.51]
gi|88182176|gb|EAQ89644.1| hypothetical protein CHGG_06263 [Chaetomium globosum CBS 148.51]
Length = 651
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 219/692 (31%), Positives = 333/692 (48%), Gaps = 148/692 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I G++LW+ A+ S ++ I +EE+S + ++ AA
Sbjct: 1 MLDAFEIINTSGVVLWSRNYA--AVSPSVVNNFISDVFIEEKSTVTGAKDGASAAANPPY 58
Query: 57 ----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--D 105
++L+WTF+ ELG++FVAVY+ +LHL ++D L+ +K F +Y P T +
Sbjct: 59 KYDQHSLRWTFNKELGIIFVAVYRSLLHLPWIDKLVDNIKAIFLSLYGDQLKKPNTTIIE 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGG---- 161
FDE F Q Q+Q+ E+GS++S
Sbjct: 119 CIKFDEYFEQ------------------------------QIQE--LEQGSSKSDTRAYI 146
Query: 162 --GSANDDGDSDNMRGRKLENGH-SNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ 218
++ D GD + + N + + E V+ ++S++
Sbjct: 147 DEATSEDAGDDPPLPPALVPNQKPQDKSSAEPSPVATPNVSRPSTPSASHLLVAKPGPGG 206
Query: 219 KLRNKGGKKTDTVVSKGSNPD--PKKK-----ITKKNRVWD-----DSPPESKLDFT--- 263
K+ + K +T + S+ D P +K K+ R WD D + +LD++
Sbjct: 207 KMSRRARKIQNTTSAPPSSGDEGPGRKGKPVKAAKRGRKWDADGLADETDDVQLDYSITN 266
Query: 264 ----DPAGGNGSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAK 312
+ G G+ EV+A+ GE+ K +EV S + D + K+ A+
Sbjct: 267 DSGAEAGGRPGAVEEVDASTWGETSKGKFVLRDLGDEVHSILA----DADAKKNTTAKAE 322
Query: 313 -KTGWFSS-------MFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
TG S +F+++ G L K DLE A+K +++ L+ KNVA
Sbjct: 323 GSTGLVGSSLSAIGGLFRNVVGGKTLTKQDLEKAMKGMEEHLLKKNVAREAAVRLCEGVE 382
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYV 385
AME +L ++LTP S+D+LR++ A A RK PYV
Sbjct: 383 KELLGVKTGNFESINARIQKAMEASLTKMLTPTSSLDLLREIDAITAPSATSLRKARPYV 442
Query: 386 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------- 437
+ VGVNGVGKSTNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L
Sbjct: 443 MSIVGVNGVGKSTNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREG 502
Query: 438 -QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
QV +++KGY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K P
Sbjct: 503 GQVELYQKGYGKDAAAVAKDAVAFAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQP 562
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L VGEALVG D+V Q FN S +DG +++K DT+ D VG +S+V
Sbjct: 563 DKILMVGEALVGTDSVAQARNFNAAFGSGRS------LDGFIISKCDTVGDMVGTLVSIV 616
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ + PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 617 HATNVPVLFVGVGQHYSDLRNFSVKWAVEKLL 648
>gi|367021274|ref|XP_003659922.1| hypothetical protein MYCTH_2297489 [Myceliophthora thermophila ATCC
42464]
gi|347007189|gb|AEO54677.1| hypothetical protein MYCTH_2297489 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 216/693 (31%), Positives = 323/693 (46%), Gaps = 147/693 (21%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I G++LW+ + S ++ I +EE+S +A D A AA
Sbjct: 1 MLDAFEIINTSGVVLWSRSYA--PVSPSVVNNFISDVFIEEKSTVAGAK-DGASAASNPP 57
Query: 57 -----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD-----PKRT-- 104
++L+WTF+ ELG++FVAVY+ +LHL +VD L+ +K F +YD P T
Sbjct: 58 YKHDQHSLRWTFNKELGIIFVAVYRSLLHLPWVDKLVDNIKAIFVSLYDDQLKKPNTTIV 117
Query: 105 DYSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
FDE F Q +E E+ N+S +
Sbjct: 118 QCVKFDEYFDQQLRE--------------------------------LEQAGNKSDARAY 145
Query: 165 NDDGDSDNMRGRK-----LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSK--- 216
D+ S +++ L N H+ N ES N ++ + V+K
Sbjct: 146 GDETVSGSIKDEPPLPSALSN-HAKAQNKSSAESSPVPTPNVSRPSTPSASHLLVAKPGP 204
Query: 217 ---LQKLRNKGGKKTDTVVSKGSNPDPKK----KITKKNRVWD-----DSPPESKLDF-- 262
+ + K S G +K K K+ R WD D + +LD+
Sbjct: 205 GAKMSRRARKMQNNNPVPPSSGDEATGRKGKPAKAAKRGRKWDADGLADETDDVQLDYSV 264
Query: 263 ----TD---PAGGN-GSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHN 307
TD AGG G+ EV+A+ G K +EV S +++E +
Sbjct: 265 HASTTDNEAVAGGRPGAVEEVDASTWGSRTKGKFVLRDLGDEVHSILADAEAKNKAATET 324
Query: 308 KPDAKKTG----WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------- 352
+ G +F+++ G L K DLE A+K +++ L+ KNVA
Sbjct: 325 EASTGLVGSSLSAIGGLFRNVVGGKTLTKQDLEKAMKGMEEHLLKKNVAREAAVRLCEGV 384
Query: 353 ---------------------AMEEALVRILTPRRSIDILRDVHAAK-------EQRKPY 384
AME +L ++LTP S+D+LR++ + + +PY
Sbjct: 385 EKELIGVKTGSFESINSRIRKAMEASLTKMLTPTSSLDLLREIDSVTSPPATSLRKARPY 444
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------ 438
V+ VGVNGVGKSTNL+K+ ++LLQ++ V++AA DTFRSGAVEQL H R L+
Sbjct: 445 VMSIVGVNGVGKSTNLSKICFFLLQNQYKVLIAAGDTFRSGAVEQLAVHVRNLKELTARE 504
Query: 439 ---VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
V +++KGY KD A VAK+A+ A + G DVVL+DTAGR +++ LM +L K
Sbjct: 505 GGKVELYQKGYGKDAAAVAKDAVAFAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQ 564
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PD +L VGEALVG D+V Q FN S +DG +++K DT+ D VG +S+
Sbjct: 565 PDKILMVGEALVGTDSVAQARNFNAAFGSGRS------LDGFIISKCDTVGDMVGTLVSI 618
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+ + PV+FVG GQ Y+DL+ +VK V+ LL
Sbjct: 619 VHATNVPVLFVGVGQHYSDLRNFSVKWAVEKLL 651
>gi|219123108|ref|XP_002181873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406474|gb|EEC46413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 308
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 190/311 (61%), Gaps = 49/311 (15%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------- 352
+ + QS G L ADL+ LK+++ L +KNVA
Sbjct: 5 TGLMQSWTGNKTLSDADLDQPLKSMEQLLTSKNVAREVAHELCLGIRGKLEGKKLNSLYR 64
Query: 353 -------AMEEALVRILTPRRSIDILRDVHAAK--------EQRKPYVVVFVGVNGVGKS 397
A+E L ++L + +D+LR+ + + +R PYV+ VG+NGVGKS
Sbjct: 65 VQTAVRQALESTLTKML--KMHVDLLRNTMSKRGDNSLFKMSKRAPYVIAVVGINGVGKS 122
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 457
T+LAK+AY+ Q+ S ++ A DTFRSGAVEQL+ HA L +P++ +GY KDP+IVAK A
Sbjct: 123 TSLAKLAYYFKQNGCSPLLVAGDTFRSGAVEQLKVHASCLDIPMYSQGYSKDPSIVAKAA 182
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSK 517
IQ AT DVVL+DTAGRMQ+N PLM+AL KL+ N PD V+ V EALVG+D + Q +
Sbjct: 183 IQHATEENHDVVLIDTAGRMQNNVPLMKALGKLVTENKPDFVILVCEALVGHDGLSQFTM 242
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
F Q L + IDG++LTKFDT+ DKVGAAL++ + +GAP++F G GQ Y LKK
Sbjct: 243 FKQALG-------IRGIDGLILTKFDTVSDKVGAALTLTHQTGAPIIFCGTGQKYHHLKK 295
Query: 578 LNVKSIVKTLL 588
L+V S++++L
Sbjct: 296 LSVTSVIQSLF 306
>gi|86196350|gb|EAQ70988.1| hypothetical protein MGCH7_ch7g395 [Magnaporthe oryzae 70-15]
Length = 640
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 210/680 (30%), Positives = 316/680 (46%), Gaps = 135/680 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLAS------------F 48
ML+ I T G++LW+ + L + S I++ I +EE++G S +
Sbjct: 1 MLDTFEIVTTTGVVLWS-RTL-TPVSPSVINSFISDVFIEEKAGAGSTRESSSASSNPPY 58
Query: 49 NYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSD 108
DS +TL+W F ELGL+FVAVY+ + HL ++D L+ ++ F +Y
Sbjct: 59 RTDS----HTLRWAFVKELGLIFVAVYRSLFHLSWIDKLVDNIRAIFVNLYG-------- 106
Query: 109 FDEMFRQLRKEAEARAEELK-KSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDD 167
E R L+ + L+ S+ + P + + G RG NR+G + +
Sbjct: 107 --EQSRSLKAQRTLGPPRLRAHSRMRSCPETSARNHPFPSAPGLHHRG-NRAGAAAQDKS 163
Query: 168 GDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSN-IGAFDVSKLQKLRNKGGK 226
DS + + TG T +N + L K+ + +
Sbjct: 164 VDSSPV-------------------ASPTGSRPATPGTGTNHLLVAKAGPLAKMSRRA-R 203
Query: 227 KTDTVVSKGSNPDPKKKITKKN-----RVWDD--------------SPPESKLDFTDPAG 267
K + + G P +K K R WD S + D D G
Sbjct: 204 KAQSANTSGDETSPARKAKAKATGKKGRKWDADGLATEDDDVQLDYSQTNAASDIDDGVG 263
Query: 268 GNGSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAKKTG----W 316
+ + EV+AA G K +EV S + + +K DA G
Sbjct: 264 RSSALEEVDAATWGTKTKGKFVLRDLGDEVHSILESEKNKAQANSSSKQDAGLIGSSLST 323
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
+F+++ G L + DL+ A+K ++D L+ KNVA
Sbjct: 324 IGGLFRNVVGGKVLTREDLDKAMKGMEDHLLRKNVAREAAVRLCEGVEKELVGVKTGSFE 383
Query: 353 --------AMEEALVRILTPRRSIDILRDVHAAKE-------QRKPYVVVFVGVNGVGKS 397
AME +L R+LTP S+D+LR++ + + + +PYV+ VGVNGVGKS
Sbjct: 384 SINTRVQAAMEASLTRMLTPTSSLDLLREIDSVTQPSVTSLRKPRPYVMSIVGVNGVGKS 443
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEK 448
TNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L QV +++KGY K
Sbjct: 444 TNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGQVELYQKGYGK 503
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG
Sbjct: 504 DAAAVAKDAVSHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVG 563
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
D+V Q FN S +DG +++K DT+ VG +S+V+ + PV+FVG
Sbjct: 564 TDSVAQARNFNAAFGSGRS------LDGFIISKCDTVGTMVGTLVSIVHATNVPVLFVGV 617
Query: 569 GQSYTDLKKLNVKSIVKTLL 588
GQ Y+DL+ +VK V+ LL
Sbjct: 618 GQHYSDLRNFSVKWAVEKLL 637
>gi|303324207|ref|XP_003072091.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111801|gb|EER29946.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320037086|gb|EFW19024.1| signal sequence receptor alpha subunit [Coccidioides posadasii str.
Silveira]
Length = 647
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 197/341 (57%), Gaps = 57/341 (16%)
Query: 300 DEEVGKHNKPD---AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---- 352
D+E K N P + G S +F+++ G L KADLE +KA++D L+ KNVA
Sbjct: 313 DQEKAKSNTPSGMVSSGLGAISGLFRNVVGGKVLTKADLEKPIKAMEDHLLKKNVAREAA 372
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDVHAA------K 378
AME +L +ILTP S+D+LR++ A +
Sbjct: 373 LRLCEGVEHELVGKKTGSFQSIDSALRSAMESSLRKILTPTSSLDLLREIDAVTSPRNNQ 432
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL- 437
+ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L
Sbjct: 433 QARRPYVISIVGVNGVGKSTNLSKICFFLLQNNYKVLIAACDTFRSGAVEQLRVHARNLK 492
Query: 438 ---------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
Q+ ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 493 ELSEREQVGQIELYEKGYGKDAANVAKDAVAYAASNDFDVVLIDTAGRRHNDQRLMSSLE 552
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
K PD + VGEALVG D+V Q FNQ S +DG +++K DT+ D
Sbjct: 553 KFAKFAAPDKIFMVGEALVGTDSVMQARNFNQAFGTGRS------LDGFIISKCDTVGDM 606
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 607 VGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 647
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER--------SGLASFNYDS 52
ML+ I T G++LW+ + ++ LI + +EE+ G A Y
Sbjct: 1 MLDSFEIITTSGVVLWSRSYA--PVGAHIVNDLISTVFIEEKIHLPDSGAEGTAHQQYKK 58
Query: 53 AGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDY 106
YTL+WT +LGL+FVAVYQ +LHL ++D+LL K F ++Y + R
Sbjct: 59 E--KYTLRWTRSKDLGLLFVAVYQSLLHLSWIDELLENTKTIFIDLYKEQLKGSKHRVVE 116
Query: 107 SDFDEMFRQLRKEAEARA 124
FD F Q +E E A
Sbjct: 117 YPFDPYFDQQLQELENAA 134
>gi|225561032|gb|EEH09313.1| signal sequence receptor alpha subunit [Ajellomyces capsulatus
G186AR]
Length = 914
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 302/646 (46%), Gaps = 122/646 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER------SGLASFNYDSAG 54
ML+ I T G++LW+ + I++LI +EE+ SG + Y
Sbjct: 1 MLDSFEIITSSGVVLWSRSYA--PVGAHVINSLINDVFIEEKFQQEAGSGTVAPRYRKE- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFR 114
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K + F E++
Sbjct: 58 -KYTLKWKRAKDLGLIFVAVYQSLLHLTWIDELLENIK--------------TIFVEIYN 102
Query: 115 QLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGG------------FERGSNRSGGG 162
+ K+ +R E + K + + L+ G+ +G E +
Sbjct: 103 EQLKKPNSRIIEYRFDKYFDQQVKELESAAGKAVEGSPSLLIEEKKDTLVEADNGGPPPP 162
Query: 163 SANDDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRN 222
+ R + N + + + E SR N + G + +K N
Sbjct: 163 PIPGLLPAQRHAARAVANSNESSPSQTPETSR-PATPNHIITAKAGPGGRTSRRARKAAN 221
Query: 223 KGGKKT--DTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSNIE- 274
+ + + K N K KK R WD D LD++ + NGS E
Sbjct: 222 SSANVSSGEDTIKKAKN---AKSAVKKMRKWDSEGFADEDNGEILDYS-ASNVNGSESEE 277
Query: 275 -----VEAADH---------GESMMDK--EEVFS--SDSESEEDEEVGKHNKPDAKKTGW 316
VEA D G+ ++ +EV S D+++ +D N G
Sbjct: 278 VAGPPVEAVDQDSWGTKTKKGQFVLKDLGDEVHSILQDADAAKDR-ASMSNGVVGSSLGA 336
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 337 ISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCDGVEQELIGKKTGSFQ 396
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGKST 398
AME +L +ILTP S+D+LR++ A +++QR+PYV+ VGVNGVGKST
Sbjct: 397 SIDAALRAAMESSLRKILTPTSSLDLLREIEAVTSPSNSQKQRRPYVISIVGVNGVGKST 456
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEK 448
NL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY K
Sbjct: 457 NLSKICFFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGYGK 516
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A VAK+A+ A N DVVL+DTAGR +++ LM +L K PD + VGEALVG
Sbjct: 517 DAANVAKDAVAYAAVNNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEALVG 576
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
D+V Q FNQ + +DG +++K DT+ D VGA ++
Sbjct: 577 TDSVMQARNFNQAFG------TGRKLDGFIMSKCDTVGDMVGALVT 616
>gi|119173320|ref|XP_001239133.1| hypothetical protein CIMG_10155 [Coccidioides immitis RS]
gi|392869339|gb|EAS27241.2| signal sequence receptor alpha subunit [Coccidioides immitis RS]
Length = 647
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 197/341 (57%), Gaps = 57/341 (16%)
Query: 300 DEEVGKHNKPD---AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---- 352
D+E K N P + G S +F+++ G L KADLE +KA++D L+ KNVA
Sbjct: 313 DQEKAKSNTPSGMVSSGLGAISGLFRNVVGGKVLTKADLEKPIKAMEDHLLKKNVAREAA 372
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDVHAA------K 378
AME +L +ILTP S+D+LR++ A +
Sbjct: 373 LRLCEGVEHELVGKKTGSFQSIDSALRSAMESSLRKILTPTSSLDLLREIDAVTSPRNNQ 432
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL- 437
+ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L
Sbjct: 433 QARRPYVISIVGVNGVGKSTNLSKICFFLLQNNYKVLIAACDTFRSGAVEQLRVHARNLK 492
Query: 438 ---------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
Q+ ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 493 ELSEREQVGQIELYEKGYGKDAANVAKDAVAYAASNDFDVVLIDTAGRRHNDQRLMSSLE 552
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
K PD + VGEALVG D+V Q FNQ S +DG +++K DT+ D
Sbjct: 553 KFAKFAAPDKIFMVGEALVGTDSVMQARNFNQAFGAGRS------LDGFIISKCDTVGDM 606
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 607 VGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 647
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER--------SGLASFNYDS 52
ML+ I T G++LW+ + ++ LI + +EE+ G A Y
Sbjct: 1 MLDSFEIITASGVVLWSRSYA--PVGAHIVNDLISTVFIEEKIHLPDSGAEGTAHQQYKK 58
Query: 53 AGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD-----PK-RTDY 106
YTL+WT +LGL+FVAVYQ +LHL ++D+LL +K F ++Y PK R
Sbjct: 59 E--KYTLRWTRSKDLGLLFVAVYQSLLHLSWIDELLENIKTIFIDLYKEQLKGPKHRVVE 116
Query: 107 SDFDEMFRQLRKEAEARA 124
FD F Q +E E A
Sbjct: 117 YPFDPYFDQQLQELENAA 134
>gi|154277597|ref|XP_001539638.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413223|gb|EDN08606.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 651
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 193/323 (59%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 335 GAISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCDGVEQELIGKKTGS 394
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A +++QR+PYV+ VGVNGVGK
Sbjct: 395 FQSIDAALRAAMESSLRKILTPTSSLDLLREIEAVTSPSNSQKQRRPYVISIVGVNGVGK 454
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGY 446
STNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY
Sbjct: 455 STNLSKICFFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGY 514
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ A N DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 515 GKDAANVAKDAVAYAAVNNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 574
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VGA +SMV+ +G P++F+
Sbjct: 575 VGTDSVMQARNFNQAFG------TGRKLDGFIMSKCDTVGDMVGALVSMVHATGIPIVFL 628
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L+K
Sbjct: 629 GIGQHYGDLRGLSVPWAVGLLMK 651
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER------SGLASFNYDSAG 54
ML+ I T G++LW+ + I++LI +EE+ SG + Y
Sbjct: 1 MLDSFEIITSSGVVLWSRSYAPVGVH--VINSLINDVFIEEKFQQEAGSGAVAPRYRKE- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSD 108
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K F EIY+ + R
Sbjct: 58 -KYTLKWKRAKDLGLIFVAVYQSLLHLTWIDELLENIKTIFVEIYNEQLKKPNSRIIEYR 116
Query: 109 FDEMFRQLRKEAEARA 124
FD+ F Q KE E+ A
Sbjct: 117 FDKYFDQQVKELESAA 132
>gi|397639727|gb|EJK73726.1| hypothetical protein THAOC_04633, partial [Thalassiosira oceanica]
Length = 700
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 193/309 (62%), Gaps = 53/309 (17%)
Query: 330 LDKADLEPALKALKDRLMTKNVA--------------------------------AMEEA 357
L K DLEP L +K L +KNV+ A+E+A
Sbjct: 394 LTKPDLEPPLNQMKLLLTSKNVSPKTAKAICDCVQDQLLGKQVGTLTGVKRAVRHALEDA 453
Query: 358 LVRILTPR-----------RSIDILRDVHAAK-------EQRKPYVVVFVGVNGVGKSTN 399
+ +IL P +S+D+LR V + +Q++PYV+ +G+NGVGKST+
Sbjct: 454 IEKILRPELGNGRLSFQKGKSLDVLRGVVEKRGGVGMVGKQKRPYVICMIGINGVGKSTS 513
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
LAK+AY+L +K M+AACDTFRSGAVEQL HA L +P+F +GY KDP+ VAK AI
Sbjct: 514 LAKIAYYLQSNKCKPMLAACDTFRSGAVEQLSVHASCLGLPLFHQGYAKDPSAVAKAAIA 573
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
+A +G+DVVLVDTAGRMQ+N PLM+AL+KL+ PDLVLFV EALVG D +DQL+ F
Sbjct: 574 KAAADGNDVVLVDTAGRMQNNLPLMKALAKLVTETKPDLVLFVCEALVGTDGLDQLTMFQ 633
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LSS + + IDGI+LTKFDT+ DKVGAAL++ +++G P+ F G GQ Y LK L+
Sbjct: 634 KA---LSSGGHLRPIDGIVLTKFDTVSDKVGAALTLTHLTGVPIAFCGTGQKYNHLKPLS 690
Query: 580 VKSIVKTLL 588
V ++ +L
Sbjct: 691 VPYVISSLF 699
>gi|315053627|ref|XP_003176188.1| signal recognition particle receptor subunit alpha [Arthroderma
gypseum CBS 118893]
gi|311338034|gb|EFQ97236.1| signal recognition particle receptor subunit alpha [Arthroderma
gypseum CBS 118893]
Length = 650
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 198/342 (57%), Gaps = 58/342 (16%)
Query: 300 DEEVGKHNKPDA----KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--- 352
DEE K N A G SSMF+++ G L +ADL LKA++D L+ KNVA
Sbjct: 315 DEEKAKANGSSAGVVNSSIGAISSMFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAREA 374
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHAA------ 377
ME +L +ILTP S+D+LR++
Sbjct: 375 AVRLCEGVQKELVGKKTASFQSIDSALRAGMESSLRKILTPTSSLDLLREIEVVTSPTNR 434
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR L
Sbjct: 435 QQPRRPYVISVVGVNGVGKSTNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHARNL 494
Query: 438 Q----------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
+ V ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 495 KELSARENAGHVELYEKGYGKDAANVAKDAVSYAATNDFDVVLIDTAGRRHNDQRLMSSL 554
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
K NPD +L VGEALVG D+V Q FNQ + + +DG +++K DT+ D
Sbjct: 555 EKFAKFANPDKILMVGEALVGTDSVMQARNFNQAFG------SGRGLDGFIISKCDTVGD 608
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 609 MVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 650
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGL--ASFNYDSAGAAYT 58
ML+ + T G++LW+ + ++ ++ LI+ +EER+G+ A+ Y+ YT
Sbjct: 1 MLDAFEVITTSGVVLWS--KTYAPVRTHIVNALIKDVFIEERTGIDRAARKYNKE--QYT 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDEM 112
L+WT GL+FVAVYQ +LHL ++DDLL +K F +Y + R FD+
Sbjct: 57 LRWTEAKGFGLIFVAVYQSLLHLSWIDDLLENIKTIFLGLYKEQLKGSQFRVTNYPFDKY 116
Query: 113 FRQLRKEAEARAE 125
F Q +E + E
Sbjct: 117 FEQQLRELDQTTE 129
>gi|169609444|ref|XP_001798141.1| hypothetical protein SNOG_07814 [Phaeosphaeria nodorum SN15]
gi|160701846|gb|EAT85280.2| hypothetical protein SNOG_07814 [Phaeosphaeria nodorum SN15]
Length = 567
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 226/414 (54%), Gaps = 66/414 (15%)
Query: 232 VSKGSNPDPKKK---ITKKNRVW--------DDSPPE-SKLDFTDPAGGNGSNIEVEAAD 279
VS G K+K TK+NRVW DDS + S+ D D N + E++
Sbjct: 162 VSSGDESSSKRKGKSATKRNRVWGEFGAEEEDDSVLDYSQTDLRDENSENEAMAEIKQET 221
Query: 280 HGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT-------------GWFSSMFQSIAG 326
G +K E D + E D + N K+ G +F+++ G
Sbjct: 222 WGRKT-NKGEFVLKDLDEEMDAIISAQNAKKDKEASTAASGGLVGSSLGAIGGLFRNVVG 280
Query: 327 KANLDKADLEPALKALKDRLMTKNVAAMEEALVR----------------------ILTP 364
L K DL +K +++ L+ KNVA EA+VR ILTP
Sbjct: 281 GKTLTKEDLVKPIKGMEEHLLKKNVA--REAVVRLCESVERDLIGMKTPNFTTLTKILTP 338
Query: 365 RRSIDILRDV-HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFR 423
S+D+LR++ H +PYV+ VGVNGVGKSTNL+K+A++LLQ+ V++AA DTFR
Sbjct: 339 TSSLDLLREIAHTNSSSPRPYVLSIVGVNGVGKSTNLSKIAFFLLQNHHRVLIAAADTFR 398
Query: 424 SGAVEQLRTHARRLQ---------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTA 474
SGAVEQLR H + LQ V +FEKGY KD A +A +A+ A +NG +VVL+DTA
Sbjct: 399 SGAVEQLRVHVKNLQELSKREGGEVDLFEKGYGKDAANIAADAVTHAQKNGFNVVLIDTA 458
Query: 475 GRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLI 534
GR +++ LM +L K L NPD +L VGEALVG D+V Q FN +S + +
Sbjct: 459 GRRHNDQRLMSSLEKFAKLANPDKILMVGEALVGTDSVAQARNFN------ASFGAGRKL 512
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DG +++K DT+ D VG +SMV+ +G PV+F+G GQ Y+DL+ LNV ++ + L+
Sbjct: 513 DGFVISKCDTVGDMVGTLVSMVHATGIPVVFLGTGQHYSDLRTLNVGAVTRLLM 566
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 27/189 (14%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER------SGLASFNYDSAG 54
ML+ I T G++LW+ + + + I++LIR +EER + Y G
Sbjct: 1 MLDTFEILTTSGVVLWSRTYV--PVGANVINSLIRDVFIEERILPQPEDAGSKPTYKKEG 58
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDY-------S 107
YTLKWT +LGL+FV VY+ +D++ A+ + E +R+ S
Sbjct: 59 --YTLKWTASKDLGLIFV-VYK------LLDNVRALFVGLYGEQLKTQRSSVVNCDKFGS 109
Query: 108 DFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDD 167
FD L +++ A +K S T P + GG+L + ++ S S G ++ D
Sbjct: 110 YFDRQMHDLEGASDSGAPSIKIS---TPPSRKTRPGGGKLSRRDKKKASAMSSGPVSSGD 166
Query: 168 GDSDNMRGR 176
S +G+
Sbjct: 167 ESSSKRKGK 175
>gi|295666231|ref|XP_002793666.1| signal sequence receptor alpha subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277960|gb|EEH33526.1| signal sequence receptor alpha subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 651
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 191/323 (59%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 335 GAISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCEGVEHELVGKKTAS 394
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A ++ QR+PYV+ VGVNGVGK
Sbjct: 395 FQSIDSALRSAMESSLRKILTPTSSLDLLREIEAVTSPSSSQRQRRPYVISIVGVNGVGK 454
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGY 446
STNL+K+ ++LLQ+ V++ ACDTFRSGAVEQLR HAR LQ V ++EKGY
Sbjct: 455 STNLSKICFFLLQNNYRVLITACDTFRSGAVEQLRVHARNLQELSSRENVGHVGLYEKGY 514
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ AT N DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 515 GKDAANVAKDAVAYATANNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 574
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+
Sbjct: 575 VGTDSVMQARNFNQAFG------TGRGLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFL 628
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L+K
Sbjct: 629 GIGQHYGDLRGLSVSWAVGLLMK 651
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER----SGLASFNYDSAGAA 56
ML+ I T G++LW+ + I++LI +EE+ +G S
Sbjct: 1 MLDSFEIVTTSGVVLWSRSYA--PVGAQIINSLINDVFIEEKLQPEAGAGSVAPRYRKEN 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K F E+Y + R FD
Sbjct: 59 YTLKWRRAKDLGLIFVAVYQSLLHLTWIDELLENIKTIFVEMYKEQLKQPNFRMIEYPFD 118
Query: 111 EMFRQLRKEAEARA 124
F Q KE E+ A
Sbjct: 119 RYFDQQVKELESSA 132
>gi|326469321|gb|EGD93330.1| signal sequence receptor alpha subunit [Trichophyton tonsurans CBS
112818]
Length = 650
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 197/342 (57%), Gaps = 58/342 (16%)
Query: 300 DEEVGKHNKPDA----KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--- 352
DEE K N A G SS+F+++ G L +ADL LKA++D L+ KNVA
Sbjct: 315 DEEKAKANGSSAGVVNSSIGAISSLFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAREA 374
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHAA------ 377
ME +L +ILTP S+D+LR++
Sbjct: 375 AVRLCEGVQKELVGKKTASFQSIDSALRAGMESSLRKILTPTTSLDLLREIEVVTSPTNQ 434
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR L
Sbjct: 435 QQPRRPYVISVVGVNGVGKSTNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHARNL 494
Query: 438 Q----------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
+ V ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 495 KELSARENAGHVELYEKGYGKDAANVAKDAVAYAASNDFDVVLIDTAGRRHNDQRLMSSL 554
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
K NPD +L VGEALVG D+V Q FNQ P L DG +++K DT+ D
Sbjct: 555 EKFAKFANPDKILMVGEALVGTDSVMQARNFNQAFG-----PGRGL-DGFIISKCDTVGD 608
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 609 MVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 650
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 16/135 (11%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGL--ASFNYDSAGAA 56
ML+ + T G++LW T +G+ + I+ LI+ +EER+G+ A+ Y+
Sbjct: 1 MLDAFEVITTSGVVLWSKTYAPVGSHI----INALIKDVFIEERTGVDRAARKYNKE--Q 54
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTL+WT GL+FVAVYQ +LHL ++D+LL +K F +Y + R FD
Sbjct: 55 YTLRWTEAKGFGLIFVAVYQSLLHLTWIDELLENIKTIFLGLYKEQLKGSQFRVANYPFD 114
Query: 111 EMFRQLRKEAEARAE 125
+ F Q +E + E
Sbjct: 115 KYFEQRLRELDQTTE 129
>gi|225683852|gb|EEH22136.1| signal recognition particle receptor subunit alpha
[Paracoccidioides brasiliensis Pb03]
Length = 554
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 191/323 (59%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 238 GAISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCEGVVHELVGKKTAS 297
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A ++ QR+PYV+ VGVNGVGK
Sbjct: 298 FQSIDSALRSAMESSLRKILTPTSSLDLLREIEAVTSPSSSQRQRRPYVISIVGVNGVGK 357
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGY 446
STNL+K+ ++LLQ+ V++ ACDTFRSGAVEQLR HAR LQ V +++KGY
Sbjct: 358 STNLSKICFFLLQNNYRVLITACDTFRSGAVEQLRVHARNLQELSSRENVGHVGLYQKGY 417
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ AT N DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 418 GKDAANVAKDAVAYATANSFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 477
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+
Sbjct: 478 VGTDSVMQARNFNQAFG------AGRGLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFL 531
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L+K
Sbjct: 532 GIGQHYGDLRGLSVSWAVGLLMK 554
>gi|302654315|ref|XP_003018965.1| hypothetical protein TRV_06976 [Trichophyton verrucosum HKI 0517]
gi|291182655|gb|EFE38320.1| hypothetical protein TRV_06976 [Trichophyton verrucosum HKI 0517]
Length = 650
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 197/342 (57%), Gaps = 58/342 (16%)
Query: 300 DEEVGKHNKPDA----KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--- 352
DEE K N A G SS+F+++ G L +ADL LKA++D L+ KNVA
Sbjct: 315 DEEKAKANGSSAGVVNSSIGAISSLFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAREA 374
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHAA------ 377
ME +L +ILTP S+D+LR++
Sbjct: 375 AVRLCEGVQKELVGKKTASFQSIDSALRAGMESSLRKILTPTTSLDLLREIEVVTSPTNQ 434
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR L
Sbjct: 435 QQPRRPYVISVVGVNGVGKSTNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHARNL 494
Query: 438 Q----------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
+ V ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 495 KELSARENAGHVELYEKGYGKDAANVAKDAVAYAATNDFDVVLIDTAGRRHNDQRLMSSL 554
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
K NPD +L VGEALVG D+V Q FNQ P L DG +++K DT+ D
Sbjct: 555 EKFAKFANPDKILMVGEALVGTDSVMQARNFNQAFG-----PGRGL-DGFIISKCDTVGD 608
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 609 MVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 650
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 16/135 (11%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGL--ASFNYDSAGAA 56
ML+ + T G++LW T +G + I+ LI+ +EER+G+ A+ Y+
Sbjct: 1 MLDAFEVITTSGVVLWSKTYAPVGTHI----INALIKDVFIEERTGIDRAARKYNKE--Q 54
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTL+WT GL+FVAVYQ +LHL ++D+LL +K F +Y + R FD
Sbjct: 55 YTLRWTEAKGFGLIFVAVYQSLLHLTWIDELLENIKTIFLGLYKEQLKGSRFRVANYPFD 114
Query: 111 EMFRQLRKEAEARAE 125
+ F Q +E + E
Sbjct: 115 KYFEQQLRELDQTTE 129
>gi|430811210|emb|CCJ31304.1| unnamed protein product [Pneumocystis jirovecii]
Length = 577
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/634 (28%), Positives = 301/634 (47%), Gaps = 121/634 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML IF +GG++LW + + L + I+ I +EE+S + D+ +K
Sbjct: 1 MLTLFTIFNKGGIVLW--ERCFDPLFCNIINNFIHDIFVEEQSSKTIYVKDNL----VVK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
WT NE L+F VY ++Y+D+ L K+ F E+Y K + ++ F
Sbjct: 55 WTLSNEYDLIFAIVYSEFAQIIYIDEFLESTKKFFCELYYEKLQEKCFLEKNF-SFDSHF 113
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
+ R +E + F N + N+ ++N + E
Sbjct: 114 DVRIKEFE-----------------------FLNAKNVASSTQVNEVFLNENTSSQDFEL 150
Query: 181 GHSNVGNVE---IEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSN 237
+ + ++ + + + + +N+ + ++ NK KK T V+ +N
Sbjct: 151 DKDILDDDIPKTLKSDLESQLPETPQFSETNVSFLKKDRNKRNSNKKLKKNITKVNNLNN 210
Query: 238 PDPKKKITKKNRVWDD------SPPESKLDFTDPAGGNGSNIEVEAAD-HGESMMDK--- 287
+P KK K R W+D S LD++ + + + ++ + E+ M K
Sbjct: 211 DEPIKKNKKLMRKWEDDSILCNSDKADFLDYSVHSEKSSAPVQNDIVRLTQENCMSKDLQ 270
Query: 288 ---------EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPA 338
+++ SD + E +E+ TG F S+F ++A K L DL PA
Sbjct: 271 NGFTIREFGDDLQKSDKKGESSKEIH---------TGMF-SIFTNLAKKRILSLNDLTPA 320
Query: 339 LKALKDRLMTKNVA-------------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYV 385
L + + L+ KN+A ME +L +ILTP SID+L++++ +K Q++PY
Sbjct: 321 LTKMNELLLKKNIAKEVADTIQSIVKTTMESSLKQILTPSMSIDLLKEINFSKSQKRPYT 380
Query: 386 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------- 438
+ FVGVNGVGKST+L+K+A+WLL++ +++AACDTFRSGA+EQL+ H + LQ
Sbjct: 381 ISFVGVNGVGKSTSLSKIAFWLLKNHFKIVIAACDTFRSGAIEQLQVHVKNLQQLSEKEK 440
Query: 439 ---VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
+ +FEKGY KD ++VA AI A + D+VL+DT+GR ++ LM L K
Sbjct: 441 CGKIELFEKGYGKDASLVAGNAILYAKKKEFDIVLIDTSGRRHNDPRLMSPLEK------ 494
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
+ +KL DG +++K DT+ + VG +S+
Sbjct: 495 ------------------SFPSYKKKL------------DGFIISKVDTVGNAVGTIVSI 524
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
++ +G P++F+G GQ+YTD++ L+V +VK L+K
Sbjct: 525 IWATGIPILFIGNGQTYTDIRILSVSWVVKMLMK 558
>gi|50556754|ref|XP_505785.1| YALI0F23375p [Yarrowia lipolytica]
gi|4838528|gb|AAD31027.1|AF132597_1 signal sequence receptor alpha subunit [Yarrowia lipolytica]
gi|49651655|emb|CAG78596.1| YALI0F23375p [Yarrowia lipolytica CLIB122]
Length = 557
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 192/644 (29%), Positives = 299/644 (46%), Gaps = 142/644 (22%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M++ + FT+GG++ W + ++ LI +EE + Y YT +
Sbjct: 1 MIDHFVAFTKGGIVKWQYSPPSASNVTHIVNDLISDVFIEESYPVQDSTYTKD--IYTAR 58
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
W NE GLVFV +Y+ +LHL +V L+ +Q F ++ D ++++ F K A
Sbjct: 59 WAVANEQGLVFVCIYKTLLHLPWVGQLVTQARQLFPQL------DDNEYEAWFAT--KLA 110
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
AE +K +P+ K
Sbjct: 111 SLEAETVKP-----EPVAKAK--------------------------------------- 126
Query: 181 GHSNVGNVEIEESRVTGVA--NGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNP 238
V +E ES VT V + S+ IG + R K GKK D+ K
Sbjct: 127 ----VPVIEKIESSVTVVDTDSAASGASTPIGGGKTRR----RGKKGKKDDSTAEK---- 174
Query: 239 DPKKKITKKNRVWDD--------SPPESKLDFTD-PAGGNGSNIEVEAADHGESMMDKEE 289
KK + +K W + S ++ LDF+ P+G +V+ ++G + +
Sbjct: 175 -KKKGVMRK---WGEDGQALDVGSDDDADLDFSSGPSGATAVVEDVDMTNYGGANKQGDF 230
Query: 290 VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTK 349
V +++G P K+ + ++I G + + D++ ++++LM K
Sbjct: 231 VL---------KQLGDDEPPIPSKSRF--GFLKNIMGGKTITQEDMDKVTAKVEEQLMKK 279
Query: 350 NVA--------------------------------AMEEALVRILTPRRSIDILRDVHAA 377
NVA AM +AL +ILTP S+D+L +V
Sbjct: 280 NVAKEVAVHLCDQVSRSLVGCTTNSWTTVEQTVQQAMADALRKILTPSASLDLLHEVQRH 339
Query: 378 KE--QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
K+ +PYV+ VGVNGVGKSTNL+K+ +WLLQ+K+ +++AACDTFRSGAVEQL H
Sbjct: 340 KKLGGGRPYVISVVGVNGVGKSTNLSKIGFWLLQNKMRLLVAACDTFRSGAVEQLGVHVN 399
Query: 436 RL----------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
RL +V +F +GY KDPA A++A++ ++G DVVL+DTAGR ++ LM
Sbjct: 400 RLSELAGRQGTGEVELFAQGYGKDPAHTAEKAVEYGEKHGFDVVLIDTAGRRHSDKRLMG 459
Query: 486 ALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTI 545
L K P+ ++ VGEALVG D+V Q FN + +D L++K DT+
Sbjct: 460 DLEKFAKRARPNKIIMVGEALVGTDSVQQARNFNDAFG------KDRNLDFFLISKCDTV 513
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D +G+ ++M Y + PV+FVG GQ YTDL+ L+V V+ L +
Sbjct: 514 GDMIGSIVNMTYATNIPVLFVGTGQHYTDLRTLSVDWAVRLLTQ 557
>gi|226293236|gb|EEH48656.1| signal recognition particle protein [Paracoccidioides brasiliensis
Pb18]
Length = 651
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 191/323 (59%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADL+ LKA+++ L+ KNVA
Sbjct: 335 GAISGLFRNIVGGKVLTKADLDKPLKAMEEHLLKKNVAREAAVRLCEGVVHELVGKKTAS 394
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A ++ QR+PYV+ VGVNGVGK
Sbjct: 395 FQSIDSALRSAMESSLRKILTPTSSLDLLREIEAVTSPSSSQRQRRPYVISIVGVNGVGK 454
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGY 446
STNL+K+ ++LLQ+ V++ ACDTFRSGAVEQLR HAR LQ V +++KGY
Sbjct: 455 STNLSKICFFLLQNNYRVLITACDTFRSGAVEQLRVHARNLQELSSRENVGHVGLYQKGY 514
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ AT N DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 515 GKDAANVAKDAVAYATANSFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 574
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+
Sbjct: 575 VGTDSVMQARNFNQAFG------AGRGLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFL 628
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L+K
Sbjct: 629 GIGQHYGDLRGLSVSWAVGLLMK 651
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER----SGLASFNYDSAGAA 56
ML+ I T G++LW+ + I++LI +EE+ +G S
Sbjct: 1 MLDSFEIITTSGVVLWSRSYA--PVGAQIINSLINDVFIEEKLQPEAGAGSVAPRYRKEN 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP--KRTDYS----DFD 110
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K F E+Y KR ++ FD
Sbjct: 59 YTLKWRRAKDLGLIFVAVYQSLLHLTWIDELLENIKTIFVEMYKEQLKRPNFRVIEYPFD 118
Query: 111 EMFRQLRKEAEARA 124
F Q KE E+ A
Sbjct: 119 RYFDQQVKELESAA 132
>gi|326483433|gb|EGE07443.1| signal recognition particle receptor subunit alpha [Trichophyton
equinum CBS 127.97]
Length = 650
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 197/342 (57%), Gaps = 58/342 (16%)
Query: 300 DEEVGKHNKPDA----KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--- 352
DEE K N A G SS+F+++ G L +ADL LKA++D L+ KNVA
Sbjct: 315 DEEKVKANGSSAGVVNSSIGAISSLFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAREA 374
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHAA------ 377
ME +L +ILTP S+D+LR++
Sbjct: 375 AVRLCEGVQKELVGKKTASFQSIDSALRAGMESSLRKILTPTTSLDLLREIEVVTSPTNQ 434
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR L
Sbjct: 435 QQPRRPYVISVVGVNGVGKSTNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHARNL 494
Query: 438 Q----------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
+ V ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 495 KELSARENAGHVELYEKGYGKDAANVAKDAVAYAASNDFDVVLIDTAGRRHNDQRLMSSL 554
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
K NPD +L VGEALVG D+V Q FNQ P L DG +++K DT+ D
Sbjct: 555 EKFAKFANPDKILMVGEALVGTDSVMQARNFNQAFG-----PGRGL-DGFIISKCDTVGD 608
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 609 MVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 650
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 16/146 (10%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGL--ASFNYDSAGAA 56
ML+ + T G++LW T +G+ + I+ LI+ +EER+G+ A+ Y+
Sbjct: 1 MLDAFEVITTSGVVLWSKTYAPVGSHI----INALIKDVFIEERTGVDRAARKYNKE--Q 54
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTL+WT GL+FVAVYQ +LHL ++D+LL +K F +Y + R FD
Sbjct: 55 YTLRWTEAKGFGLIFVAVYQSLLHLTWIDELLENIKTIFLGLYKEQLKGSQFRVANYPFD 114
Query: 111 EMFRQLRKEAEARAEELKKSKQVTKP 136
+ F Q +E + E + K+ +P
Sbjct: 115 KYFEQRLRELDQTTELPAEDKRQLRP 140
>gi|345562910|gb|EGX45918.1| hypothetical protein AOL_s00112g107 [Arthrobotrys oligospora ATCC
24927]
Length = 663
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 188/310 (60%), Gaps = 48/310 (15%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------------- 352
++ G L + D E A+ + L+ KNVA
Sbjct: 359 LRNFVGGKTLTREDTEKAISGVMTHLLEKNVAREAAVQICDSVQTSLVGQKTGSFQSIES 418
Query: 353 ----AMEEALVRILTPRRSIDILRDVHAAKE-QRKPYVVVFVGVNGVGKSTNLAKVAYWL 407
AME+AL +ILTP S+D+LR++ +E + +PYV+ VGVNGVGKSTNL+K++++L
Sbjct: 419 LVKLAMEDALRKILTPTTSLDLLREIGQVRETEERPYVISVVGVNGVGKSTNLSKISFFL 478
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKGYEKDPAIVAKEAI 458
LQ+K+ V++AACDTFRSGAVEQLR HAR L+ V ++EKGY KD A +AK+A+
Sbjct: 479 LQNKLKVLIAACDTFRSGAVEQLRVHARNLKELSEREGGVVELYEKGYGKDAANIAKDAV 538
Query: 459 QEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKF 518
A NG DVVL+DTAGR +++ LM +L K NPD +L VGEALVG+D+V Q F
Sbjct: 539 SYAGTNGFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKILMVGEALVGSDSVQQARNF 598
Query: 519 NQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
N + +DG +++K DT+ D VG +SMV+ +G PV+F+G GQ+YTDL+ L
Sbjct: 599 NAAFG------KERKLDGFIISKCDTVGDMVGTLISMVFATGIPVVFLGVGQNYTDLRTL 652
Query: 579 NVKSIVKTLL 588
NVK V L+
Sbjct: 653 NVKWAVGLLM 662
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 28/152 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLAS----FNYDSAGAA 56
ML+ + T G++LW+ +K S I++LI +EER+ S F DS
Sbjct: 1 MLDLFEVITTSGVVLWSKSYA--PVKPSIINSLISDVFIEERNQPGSDGKWFKKDS---- 54
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYS------DFD 110
YTLKWT ++GLVFVAVYQ ++HL ++D+LL +K+ F +Y K + FD
Sbjct: 55 YTLKWTLAADVGLVFVAVYQSLIHLTWIDELLDQVKKLFVALYGEKIKASTGTKIQCHFD 114
Query: 111 EMF----RQLRKEAEARAEELKKSKQVTKPMN 138
+ F R L ++A A T+P N
Sbjct: 115 QYFEASLRSLERQAGGAA--------TTRPTN 138
>gi|261196279|ref|XP_002624543.1| signal sequence receptor alpha subunit [Ajellomyces dermatitidis
SLH14081]
gi|239587676|gb|EEQ70319.1| signal sequence receptor alpha subunit [Ajellomyces dermatitidis
SLH14081]
gi|239614635|gb|EEQ91622.1| signal sequence receptor alpha subunit [Ajellomyces dermatitidis
ER-3]
gi|327356628|gb|EGE85485.1| signal sequence receptor alpha subunit [Ajellomyces dermatitidis
ATCC 18188]
Length = 650
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 191/323 (59%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F++I G L KADLE LKA++++L+ KNVA
Sbjct: 334 GAISGLFRNIVGGKVLTKADLEKPLKAMEEQLLKKNVAREAAIRLCDGVEKELTGKKTGN 393
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ A ++QR+PYV+ VGVNGVGK
Sbjct: 394 FQSIDSALRTAMESSLRKILTPTSSLDLLREIEAVTSPSSTQKQRRPYVISIVGVNGVGK 453
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGY 446
STNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L+ V ++EKGY
Sbjct: 454 STNLSKICFFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGHVELYEKGY 513
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ N DV+L+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 514 GKDAANVAKDAVSYGAANNFDVILIDTAGRRHNDQRLMSSLEKFAKFAQPDKIFMVGEAL 573
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+
Sbjct: 574 VGTDSVMQARNFNQAFG------AGRGLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFL 627
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L+K
Sbjct: 628 GVGQHYGDLRGLSVPWAVGLLMK 650
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER------SGLASFNYDSAG 54
ML+ I T G++LW+ ++ I++LI +EER SG+ + Y
Sbjct: 1 MLDSFEIITTSGVVLWSRSYAPVGVQ--IINSLINDVFIEERLQQEAGSGIVAPRYKKE- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSD 108
YTLKW +LGL+FVAVYQ +LHL ++D+LL +K F E+Y + R
Sbjct: 58 -KYTLKWKQAKDLGLIFVAVYQSLLHLTWIDELLENIKTIFVEMYKEQLKQPNSRIVEYP 116
Query: 109 FDEMFRQLRKEAEARA 124
FD+ F Q KE E+ A
Sbjct: 117 FDKYFDQQVKELESAA 132
>gi|302504693|ref|XP_003014305.1| hypothetical protein ARB_07612 [Arthroderma benhamiae CBS 112371]
gi|291177873|gb|EFE33665.1| hypothetical protein ARB_07612 [Arthroderma benhamiae CBS 112371]
Length = 650
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 195/342 (57%), Gaps = 58/342 (16%)
Query: 300 DEEVGKHNKPDA----KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--- 352
DEE K N G SS+F+++ G L +ADL LKA++D L+ KNVA
Sbjct: 315 DEEKAKANGSSTGVVNSSIGAISSLFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAREA 374
Query: 353 -----------------------------AMEEALVRILTPRRSIDILRDVHAA------ 377
ME +L +ILTP S+D+LR++
Sbjct: 375 AVRLCEGVQKELVGKKTASFQSIDSALRAGMESSLRKILTPTTSLDLLREIEVVTSPTNQ 434
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
+ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR L
Sbjct: 435 QHPRRPYVISVVGVNGVGKSTNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHARNL 494
Query: 438 Q----------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
+ V ++EKGY KD A VAK+A+ A N DVVL+DTAGR +++ LM +L
Sbjct: 495 KELSARENAGHVELYEKGYGKDAANVAKDAVAYAASNDFDVVLIDTAGRRHNDQRLMSSL 554
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
K NPD +L VGEALVG D+V Q FNQ P L DG +++K DT+ D
Sbjct: 555 EKFAKFANPDKILMVGEALVGTDSVMQARNFNQAFG-----PGRGL-DGFIISKCDTVGD 608
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 609 MVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 650
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 16/135 (11%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGL--ASFNYDSAGAA 56
ML+ + T G++LW T +G + I+ LI+ +EER+G+ A+ Y+
Sbjct: 1 MLDAFEVITTSGVVLWSKTYAPVGTHI----INALIKDVFIEERTGIDRAARKYNKE--Q 54
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTL+WT GL+FVAVYQ +LHL ++D+LL +K F +Y + R FD
Sbjct: 55 YTLRWTEAKGFGLIFVAVYQSLLHLTWIDELLENIKTIFLGLYKEQLKGSRFRVANYPFD 114
Query: 111 EMFRQLRKEAEARAE 125
+ F Q +E + E
Sbjct: 115 KYFEQQLRELDQTTE 129
>gi|358374024|dbj|GAA90619.1| signal sequence receptor alpha subunit [Aspergillus kawachii IFO
4308]
Length = 646
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 195/344 (56%), Gaps = 61/344 (17%)
Query: 301 EEVGKHNKPDAKKTGWFSSMF-------QSIAGKANLDKADLEPALKALKDRLMTKNVA- 352
E G DA G+ S F ++I G L +ADLE LK ++D L+ KNVA
Sbjct: 309 ENAGSDKAKDASSAGFVGSGFNAIGGLLRNIVGGKTLTEADLEKPLKTMEDHLLKKNVAR 368
Query: 353 -------------------------------AMEEALVRILTPRRSIDILRDVHA----- 376
AME +L +ILTP S+D+LR++ A
Sbjct: 369 EAAVRLCEGVKRELVGKKTGNFQSVDAALRSAMESSLRKILTPTSSLDLLREIDAVTSPT 428
Query: 377 AKEQR-KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
+K+Q +PYV+ VGVNGVGKSTNL K+ Y+LLQ+K V++AACDTFRSGAVEQLR HAR
Sbjct: 429 SKQQAPRPYVISIVGVNGVGKSTNLGKICYFLLQNKYRVLIAACDTFRSGAVEQLRVHAR 488
Query: 436 RL----------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
L +V ++EKGY KD A VAK+A++ N DVVL+DTAGR +++ LM
Sbjct: 489 NLKELSARENAGEVELYEKGYGKDAANVAKDAVEYGAANHFDVVLIDTAGRRHNDQRLMS 548
Query: 486 ALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTI 545
+L K NPD + VGEALVG D+V Q FNQ + +DG +++K DT+
Sbjct: 549 SLEKFAKFANPDKIFMVGEALVGTDSVMQARNFNQAFG------TGRNLDGFIISKCDTV 602
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 603 GDMVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVNLLMK 646
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG---AAY 57
MLE I T G++LW+ + +++LI +EE+ L + + + Y
Sbjct: 1 MLEAFEILTASGVVLWSKSYA--PVGAHIVNSLISDVFIEEKVQLQATSNAAPSFKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
TLKW E L+FVAVYQ +L L ++D LL + + ++Y + R FD+
Sbjct: 59 TLKWKRVKEFDLIFVAVYQSLLQLGWIDKLLDNISTLYIDLYKDQLRSTRARIAQYPFDK 118
Query: 112 MFRQLRKEAEARA 124
F Q +E E ++
Sbjct: 119 YFDQQVRELEDKS 131
>gi|327309164|ref|XP_003239273.1| signal sequence receptor alpha subunit [Trichophyton rubrum CBS
118892]
gi|326459529|gb|EGD84982.1| signal sequence receptor alpha subunit [Trichophyton rubrum CBS
118892]
Length = 650
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 197/344 (57%), Gaps = 58/344 (16%)
Query: 298 EEDEEVGKHNKPDAK----KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA 353
+ DEE K N G SS+F+++ G L +ADL LKA++D L+ KNVA
Sbjct: 313 DADEEKAKANGSSTSVVNSSIGAISSLFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAC 372
Query: 354 --------------------------------MEEALVRILTPRRSIDILRDVHAA---- 377
ME +L +ILTP S+D+LR++
Sbjct: 373 EAAVRLCEGVQKELVGKKTASFQSIDSALRAGMESSLRKILTPTTSLDLLREIEVVTSPM 432
Query: 378 --KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
++ R+PYV+ VGVNGVGKSTNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR
Sbjct: 433 NQQQPRRPYVISVVGVNGVGKSTNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHAR 492
Query: 436 RLQ----------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
L+ V ++EKGY KD A VAK+A+ A N +VVL+DTAGR +++ LM
Sbjct: 493 NLKELSARENAGHVELYEKGYGKDAANVAKDAVAYAASNDFEVVLIDTAGRRHNDQRLMS 552
Query: 486 ALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTI 545
+L K NPD +L VGEALVG D+V Q FNQ P L DG +++K DT+
Sbjct: 553 SLEKFAKFANPDKILMVGEALVGTDSVMQARNFNQAFG-----PGRGL-DGFIISKCDTV 606
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 607 GDMVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVGLLMK 650
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 16/135 (11%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGL--ASFNYDSAGAA 56
ML+ + T G++LW T +G + I+ LI+ +EER+G+ A+ Y+
Sbjct: 1 MLDSFEVITTSGVVLWSKTYAPVGTHI----INALIKDVFIEERTGIDRAARKYNKE--Q 54
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTL+WT GL+FVAVYQ +LHL ++D+LL +K F +Y + R FD
Sbjct: 55 YTLRWTEAKGFGLIFVAVYQSLLHLTWIDELLENIKTIFLGLYKEQLKGSRFRVANYPFD 114
Query: 111 EMFRQLRKEAEARAE 125
+ F Q +E + E
Sbjct: 115 KYFEQQLRELDQTTE 129
>gi|296814538|ref|XP_002847606.1| signal recognition particle receptor subunit alpha [Arthroderma
otae CBS 113480]
gi|238840631|gb|EEQ30293.1| signal recognition particle receptor subunit alpha [Arthroderma
otae CBS 113480]
Length = 646
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 191/323 (59%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S+MF+++ G L +ADL LKA++D L+ KNVA
Sbjct: 330 GAISNMFRNVVGGKVLTEADLVKPLKAMEDHLLKKNVAREAAVRLCEGVQKELVGKKTAS 389
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAA------KEQRKPYVVVFVGVNGVGK 396
ME +L +ILTP S+D+LR++ ++ R+PYV+ VGVNGVGK
Sbjct: 390 FQSIDSALRAGMESSLRKILTPTSSLDLLREIEVVTSPTNKQQPRRPYVISVVGVNGVGK 449
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGY 446
STNL+K+ ++LLQ+K V++AACDTFRSGAVEQLR HAR L+ V ++EKGY
Sbjct: 450 STNLSKLCFFLLQNKYKVLIAACDTFRSGAVEQLRVHARNLKELSARENVGHVELYEKGY 509
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ A N DVVL+DTAGR +++ LM +L K NPD +L VGEAL
Sbjct: 510 GKDAANVAKDAVSYAAANDFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKILMVGEAL 569
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+
Sbjct: 570 VGTDSVMQARNFNQAFG------AGRGLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFL 623
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L+K
Sbjct: 624 GVGQHYGDLRGLSVPWAVGLLMK 646
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG---- 54
ML+ + T G++LW T +G + I++LI+ +EER+ L D +
Sbjct: 1 MLDTFEVITTSGVVLWSKTYAPVGTHI----INSLIKDVFIEERTHLQDSGVDRSARRYN 56
Query: 55 -AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYS 107
YTLKWT GL+FV+ +LHL ++DDLL +K F +Y + R
Sbjct: 57 KEQYTLKWTEAKGFGLIFVS----LLHLTWIDDLLENIKTIFLGLYKEQLKGSRSRVANY 112
Query: 108 DFDEMFRQLRKEAEARAEELKKSKQ 132
FD+ F Q +E + E L K+
Sbjct: 113 PFDKYFEQQLRELDQTTELLADDKR 137
>gi|119467570|ref|XP_001257591.1| signal sequence receptor alpha subunit, putative [Neosartorya
fischeri NRRL 181]
gi|119405743|gb|EAW15694.1| signal sequence receptor alpha subunit, putative [Neosartorya
fischeri NRRL 181]
Length = 649
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 221/427 (51%), Gaps = 76/427 (17%)
Query: 229 DTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGSN---IEVEAADH 280
D + KG P K KK R WD D LD++ PA G + +EV A +
Sbjct: 233 DESIRKGKTP----KSGKKMRKWDADGFADEDDGKVLDYSAPADGEDAPAPVVEVVAQES 288
Query: 281 GESMMDKEEVFSSD--SESEEDEEVGKHNKPDAKK-TGWFSS-------MFQSIAGKANL 330
K + D E E H K A TG S F++I G L
Sbjct: 289 WGRRTGKGQFVLKDLGDEVHSILENADHEKAKASSSTGLVGSGVNALGGFFRNIVGGKVL 348
Query: 331 DKADLEPALKALKDRLMTKNVA--------------------------------AMEEAL 358
+ADLE LKA++D L+ KNVA AME +L
Sbjct: 349 TEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVQRELVGKKTGNFQSVDAALRSAMESSL 408
Query: 359 VRILTPRRSIDILRDVHAAK------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
+ILTP S+D+LR++ A + + +PYV+ VGVNGVGKSTNL K+ Y+LLQ+
Sbjct: 409 RKILTPTSSLDLLREIDAVRSPTSKGQAPRPYVISIVGVNGVGKSTNLGKICYFLLQNNY 468
Query: 413 SVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPAIVAKEAIQEAT 462
V++AACDTFRSGAVEQLR HAR L +V ++EKGY KD A VAK+A++
Sbjct: 469 RVLIAACDTFRSGAVEQLRVHARNLKELSARENAGEVELYEKGYGKDAANVAKDAVEYGA 528
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
N DVVL+DTAGR +++ LM +L K PD + VGEALVG D+V Q FNQ
Sbjct: 529 ANQFDVVLIDTAGRRHNDQRLMSSLEKFAKFAKPDKIFMVGEALVGTDSVMQARNFNQAF 588
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
+ +DG +++K DT+ D VG +SMV+ +G P++F+G GQ Y DL+ L+V
Sbjct: 589 G------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPW 642
Query: 583 IVKTLLK 589
V L+K
Sbjct: 643 AVNLLMK 649
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
MLE + T G++LW+ + +++LI +EE+ + + N ++ AA
Sbjct: 1 MLEAFEVLTTSGVVLWSKSYA--PVGAHVVNSLINDVFIEEK--VRAQNQATSSAAPIYK 56
Query: 57 ---YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYS 107
YTLKW + L+FVAVYQ +LHL ++D LL + F ++Y + R
Sbjct: 57 KEKYTLKWKQVKDFNLIFVAVYQSLLHLGWIDKLLDNISTIFVDLYKDELRSARARIIEY 116
Query: 108 DFDEMFRQLRKEAEARA 124
FD+ F Q +E E A
Sbjct: 117 PFDKYFDQQVRELEDNA 133
>gi|258570483|ref|XP_002544045.1| hypothetical protein UREG_03562 [Uncinocarpus reesii 1704]
gi|237904315|gb|EEP78716.1| hypothetical protein UREG_03562 [Uncinocarpus reesii 1704]
Length = 579
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 190/323 (58%), Gaps = 54/323 (16%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------------- 352
G S +F+++ G L KADLE LKA++D L+ KNVA
Sbjct: 263 GAISGLFRNVIGGKVLTKADLENPLKAMEDHLLKKNVAREAAVRLCEGVEQELVGKKTGS 322
Query: 353 ----------AMEEALVRILTPRRSIDILRDV------HAAKEQRKPYVVVFVGVNGVGK 396
AME +L +ILTP S+D+LR++ H ++ R+PYV+ VGVNGVGK
Sbjct: 323 FQSIDAALRSAMESSLQKILTPTSSLDLLREIEAVTSPHDRQQARRPYVISIVGVNGVGK 382
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGY 446
STNL+K+ ++LLQ+ V++AACDTFRSGAVEQLR HAR L+ + ++EKGY
Sbjct: 383 STNLSKICFFLLQNNYKVLIAACDTFRSGAVEQLRVHARNLKELSERENVGHIELYEKGY 442
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A VAK+A+ A + DVVL+DTAGR +++ LM +L K PD + VGEAL
Sbjct: 443 GKDAANVAKDAVAYAASSNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAAPDKIFMVGEAL 502
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
VG D+V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+
Sbjct: 503 VGTDSVMQARNFNQAFG------TGRGLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFL 556
Query: 567 GCGQSYTDLKKLNVKSIVKTLLK 589
G GQ Y DL+ L+V V L++
Sbjct: 557 GVGQHYGDLRGLSVSWAVGLLMR 579
>gi|336275445|ref|XP_003352475.1| hypothetical protein SMAC_01309 [Sordaria macrospora k-hell]
gi|380094363|emb|CCC07742.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 676
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 317/669 (47%), Gaps = 112/669 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ A+ + ++ I +EE+S +A ++ +A
Sbjct: 1 MLDTFEILTTSGVVLWS--RTYAAVSPAVVNNFISDVFIEEKSAVAGTKDGASASANPPY 58
Query: 57 ----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-----DPKRT--D 105
+TL+W+F ELG++FVAVY+ +LHL ++D L+ ++ F +Y P T
Sbjct: 59 KYDQHTLRWSFEKELGIIFVAVYRSLLHLSWIDKLVDNIRTIFVNLYGDQLKKPNVTLIQ 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQK-GGFERGSNRSGGGSA 164
+ FD F Q +E E + + L +G G RG +
Sbjct: 119 CAKFDNYFDQQLQELEKTGSKTDSKDLLAFHDETLSDEGDMPPPLPGLVRGGRVPSNINT 178
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVEIEESRVT--GVANGKENTSSNIGAFDVSKLQKLRN 222
+ GDSD + SR T VA+ GA + +KL+N
Sbjct: 179 SKQGDSDF--------------DTSPNASRPTTPAVASHLLVAKPGPGAKMSRRARKLQN 224
Query: 223 KGGKKTDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDP---------AGG 268
+ + S K K KK R WD D + +LDF+ AG
Sbjct: 225 TNSAPASSG-DEASVKRAKAKAAKKGRKWDADGLADEGDDVQLDFSASKATSDSEGEAGR 283
Query: 269 NGSNIEVEAADHGESMMDK-------EEVFSSDSESEEDEEVGKHNKPDAKKTGW--FSS 319
+ EV+A+ G + K +EV S + +E K+ TG
Sbjct: 284 RPAVEEVDASTWGSTTRGKFVLRDLGDEVHSILASAEAKNSASKNAPAGLVGTGLSAIGG 343
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F+++ G L K DL+ +K +++ L+ KNVA
Sbjct: 344 LFRNVVGGKVLTKEDLDKTMKGMEEHLLKKNVAREAAVRLCEGVEKELIGVKTGSFESIN 403
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQRK--PYVVVFVGVNGVGKSTNL 400
AME +L ++LTP S+D+LR++ + A RK PYV+ VGVNGVGKSTNL
Sbjct: 404 TRIQKAMEVSLTKMLTPTSSLDLLREIDSITSPPATSLRKARPYVMSIVGVNGVGKSTNL 463
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKGYEKDPA 451
+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++KGY KD A
Sbjct: 464 SKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTQREGGKVELYQKGYGKDAA 523
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG D+
Sbjct: 524 AVAKDAVTFAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVGTDS 583
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FN S +DG +++K DT+ D VG +S+V+ + PV+FVG GQ
Sbjct: 584 VAQAKNFNASFGAGRS------LDGFIISKCDTVGDMVGTIVSIVHATNVPVLFVGVGQH 637
Query: 572 YTDLKKLNV 580
Y+DL+ +V
Sbjct: 638 YSDLRNFSV 646
>gi|255946073|ref|XP_002563804.1| Pc20g13240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588539|emb|CAP86653.1| Pc20g13240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 646
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 189/318 (59%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
F++I G L ++DLE LKA++D L+ KNVA
Sbjct: 335 FFRNIVGGKVLTESDLEKPLKAMEDHLLKKNVAREAAVRLCEGVKREMIGKKTGNFQSTD 394
Query: 353 -----AMEEALVRILTPRRSIDILRDVHAA------KEQRKPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR+++A ++ +PYV+ VGVNGVGKSTNL+
Sbjct: 395 AALHVAMESSLRKILTPTSSLDLLREINAVVAPTTKQQAPRPYVMSIVGVNGVGKSTNLS 454
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGYEKDPA 451
K+ Y+LLQ+K V++AACDTFRSGAVEQLR HA RL+ V I++KGY KD A
Sbjct: 455 KICYFLLQNKYRVLIAACDTFRSGAVEQLRVHADRLKELSVRENAGDVEIYQKGYGKDAA 514
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A+ A N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 515 NVAKDAVDYAAANKFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 574
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 575 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 628
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 629 YGDLRGLSVPWAVSLLMK 646
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
MLE I T G++LW+ + + I++LI +EE+ + N + G +
Sbjct: 1 MLEAFEILTTSGVVLWS--KAYAPVGAHVINSLINDVFIEEK--VVPQNETAGGVSPAYK 56
Query: 57 ---YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYS 107
YTLKW E L+FVAVYQ +LHL ++D LL + F ++Y + R
Sbjct: 57 KEKYTLKWKRVKEFDLIFVAVYQSLLHLGWIDKLLENISTIFIDLYKDQVKGNRVRIQTY 116
Query: 108 DFDEMFRQLRKEAE 121
FD+ F Q +E E
Sbjct: 117 RFDQYFEQQVRELE 130
>gi|390986523|gb|AFM35781.1| hypothetical protein, partial [Oryza eichingeri]
Length = 159
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/134 (86%), Positives = 125/134 (93%)
Query: 345 RLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
R+ + AMEEAL+RILTPRRSIDILRDVHAAKE+ KPYV+VFVGVNGVGKSTNLAKVA
Sbjct: 26 RISSTVQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGVNGVGKSTNLAKVA 85
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
YWLLQH +SV +AACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPA+VAKEAIQEATRN
Sbjct: 86 YWLLQHNLSVSLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 145
Query: 465 GSDVVLVDTAGRMQ 478
SDVVLVDTAGRMQ
Sbjct: 146 KSDVVLVDTAGRMQ 159
>gi|396082212|gb|AFN83822.1| signal recognition particle GTPase [Encephalitozoon romaleae
SJ-2008]
Length = 424
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 214/372 (57%), Gaps = 31/372 (8%)
Query: 224 GGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEV--EAADHG 281
GG K V K K + + K R W+D+ E +L+++ + G + +EV +A
Sbjct: 75 GGNKPKIVEGK-----KKTRNSIKGRKWEDAGNEEELNYSTSSSGISNLVEVIRKATVQK 129
Query: 282 ESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKA 341
+ K+E+ S+ + D T S S K +D +E A +
Sbjct: 130 AFGLFKDEIQVSELK-------------DKMTTHLISKNVSSQITKTLVDNITMELAEEG 176
Query: 342 LKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
L+ M L R++ S+D R + K + + + FVGVNGVGKST+LA
Sbjct: 177 LESISEKAFKQKMSNVLSRLIP---SVDHERMLDKIKRHKGVFSICFVGVNGVGKSTSLA 233
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-----VPIFEKGYEKDPAIVAKE 456
K+ YWLLQ+K V +AACDTFR+GA+EQLRTH R + V +EKGY KD A VA+
Sbjct: 234 KICYWLLQNKFRVYIAACDTFRAGAIEQLRTHVERFKLGGHLVGFYEKGYGKDDASVARC 293
Query: 457 AIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLS 516
AIQEA G DV+L+DTAGRM + + LM +L+KLI +NNPD +++VGEALVG+D++D +
Sbjct: 294 AIQEAQHEGYDVILIDTAGRMHNKKNLMASLTKLIKINNPDHIIYVGEALVGSDSLDHIR 353
Query: 517 KFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+FN+ + D S ID ILLTK DT+D+K+G L+M + S AP++F+G GQS +DL
Sbjct: 354 EFNKAIGDAGQSRK---IDSILLTKVDTVDNKIGQILNMAFSSHAPILFLGVGQSNSDLS 410
Query: 577 KLNVKSIVKTLL 588
+ + IV +L+
Sbjct: 411 NIGSEDIVNSLM 422
>gi|317035358|ref|XP_001396706.2| signal sequence receptor alpha subunit [Aspergillus niger CBS
513.88]
Length = 646
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 188/318 (59%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+ ++I G L +ADLE LK ++D L+ KNVA
Sbjct: 335 LLRNIVGGKTLTEADLEKPLKTMEDHLLRKNVAREAAVRLCEGVQRELVGKKTGNFQSVD 394
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR++ A +K+Q +PYV+ VGVNGVGKSTNL
Sbjct: 395 AALRSAMESSLRKILTPTSSLDLLREIDAVTSPTSKQQSPRPYVISIVGVNGVGKSTNLG 454
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ Y+LLQ+K V++AACDTFRSGAVEQLR HAR L +V ++EKGY KD A
Sbjct: 455 KICYFLLQNKYRVLIAACDTFRSGAVEQLRVHARNLRELSARENVGEVELYEKGYGKDAA 514
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A++ N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 515 NVAKDAVEYGAANHFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 574
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 575 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 628
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 629 YGDLRGLSVPWAVNLLMK 646
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG---AAY 57
MLE I T G++LW+ + +++LI +EE+ L + N + Y
Sbjct: 1 MLEAFEILTASGVVLWSKSYA--PVGAHIVNSLINDVFIEEKVQLQATNNAAPSFKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
TLKW E L+FVAVYQ +L L ++D LL + + ++Y + R FD+
Sbjct: 59 TLKWKRVKEFDLIFVAVYQSLLQLGWIDKLLDNISTLYIDLYKDQLRSTRARIAQYPFDK 118
Query: 112 MFRQLRKEAEARA 124
F Q +E E ++
Sbjct: 119 YFDQQVRELEDKS 131
>gi|134082225|emb|CAL00980.1| unnamed protein product [Aspergillus niger]
Length = 585
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 188/318 (59%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+ ++I G L +ADLE LK ++D L+ KNVA
Sbjct: 274 LLRNIVGGKTLTEADLEKPLKTMEDHLLRKNVAREAAVRLCEGVQRELVGKKTGNFQSVD 333
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR++ A +K+Q +PYV+ VGVNGVGKSTNL
Sbjct: 334 AALRSAMESSLRKILTPTSSLDLLREIDAVTSPTSKQQSPRPYVISIVGVNGVGKSTNLG 393
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ Y+LLQ+K V++AACDTFRSGAVEQLR HAR L +V ++EKGY KD A
Sbjct: 394 KICYFLLQNKYRVLIAACDTFRSGAVEQLRVHARNLRELSARENVGEVELYEKGYGKDAA 453
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A++ N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 454 NVAKDAVEYGAANHFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 513
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 514 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 567
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 568 YGDLRGLSVPWAVNLLMK 585
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG---AAY 57
MLE I T G++LW+ + +++LI +EE+ L + N + Y
Sbjct: 1 MLEAFEILTASGVVLWSKSYA--PVGAHIVNSLINDVFIEEKVQLQATNNAAPSFKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
TLKW E L+FVAVYQ +L L ++D LL + + ++Y + R FD+
Sbjct: 59 TLKWKRVKEFDLIFVAVYQSLLQLGWIDKLLDNISTLYIDLYKDQLRSTRARIAQYPFDK 118
Query: 112 MFRQLRKEAEARA 124
F Q +E E ++
Sbjct: 119 YFDQQVRELEDKS 131
>gi|350636177|gb|EHA24537.1| hypothetical protein ASPNIDRAFT_210080 [Aspergillus niger ATCC
1015]
Length = 638
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 188/318 (59%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+ ++I G L +ADLE LK ++D L+ KNVA
Sbjct: 327 LLRNIVGGKTLTEADLEKPLKTMEDHLLRKNVAREAAVRLCEGVQRELVGKKTGNFQSVD 386
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR++ A +K+Q +PYV+ VGVNGVGKSTNL
Sbjct: 387 AALRSAMESSLRKILTPTSSLDLLREIDAVTSPTSKQQSPRPYVISIVGVNGVGKSTNLG 446
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ Y+LLQ+K V++AACDTFRSGAVEQLR HAR L +V ++EKGY KD A
Sbjct: 447 KICYFLLQNKYRVLIAACDTFRSGAVEQLRVHARNLRELSARENVGEVELYEKGYGKDAA 506
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A++ N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 507 NVAKDAVEYGAANHFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 566
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 567 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 620
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 621 YGDLRGLSVPWAVNLLMK 638
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAG---AAY 57
MLE I T G++LW+ + +++LI +EE+ L + N + Y
Sbjct: 1 MLEAFEILTASGVVLWSKSYA--PVGAHIVNSLINDVFIEEKVQLQATNNAAPSFKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
TLKW E L+FVAVYQ +L L ++D LL + + ++Y + R FD+
Sbjct: 59 TLKWKRVKEFDLIFVAVYQSLLQLGWIDKLLDNISTLYIDLYKDQLRSTRARIAQYPFDK 118
Query: 112 MFRQLRKEAEARA 124
F Q +E E ++
Sbjct: 119 YFDQQVRELEDKS 131
>gi|452003830|gb|EMD96287.1| hypothetical protein COCHEDRAFT_1167367 [Cochliobolus
heterostrophus C5]
Length = 1409
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 210/664 (31%), Positives = 307/664 (46%), Gaps = 128/664 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----A 56
ML+ I T G++LW+ + + + I++LIR +EER + + S A
Sbjct: 1 MLDTFEILTTSGVVLWSRTYV--PVGANVINSLIRDVFIEERIQPQADDIGSKPAYKKDG 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTDYSDFD 110
YTLKWT ++GL+FVAVYQ ++HL ++D LL ++ F +Y D + F
Sbjct: 59 YTLKWTAAKDVGLIFVAVYQSLVHLTWIDKLLDNVRALFVGLYGDKLQSDSSVVNCDKFG 118
Query: 111 EMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDS 170
F + E E ++ S ++T P ++ + ND D
Sbjct: 119 TYFDRQMHELEGASDSGAPSIKLTTPESS-----------------------TDNDSADD 155
Query: 171 DNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ--KLRNKGGKKT 228
++ L+ + + + + V + T + S+L K R GGK +
Sbjct: 156 TAIKPAGLQKPQRPLYDTSADSTPVPTPDTSRPATPAQ------SQLLTGKSRPIGGKMS 209
Query: 229 -----------DTVVSKG---SNPDPKKKITKKNRVWDDSPPE----SKLDFTDP----- 265
VS G S K KK RVW + E S LD++
Sbjct: 210 RRDKKKASAFSSAPVSSGDEASAKKKGKGSAKKGRVWGEFGAEEEDDSILDYSQSDVQGD 269
Query: 266 AGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT----------- 314
GN + E++ G +K E D + E D + N K T
Sbjct: 270 TSGNEALEEIKQETWGRKT-NKGEFVLKDLDDEMDAIIAAQNAKRDKDTPAAAGGLVGSS 328
Query: 315 -GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
G +F+++ G L K DL LK +++ L+ KNVA
Sbjct: 329 LGAIGGLFRNVVGGKTLTKEDLAKPLKGMEEHLLRKNVAREAAVRLCESVERDLVGIKTP 388
Query: 353 -----------AMEEALVRILTPRRSIDILRDV-HAAKEQRKPYVVVFVGVNGVGKSTNL 400
+ME+AL +ILTP S+D+LR++ H +PYV+ VGVNGVGKSTNL
Sbjct: 389 SFTTIETTIKASMEKALTKILTPTSSLDLLREIQHTNSTTTRPYVLSIVGVNGVGKSTNL 448
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKDPA 451
+K+A++LLQ+ V++AA DTFRSGAVEQLR H RL V +FEKGY KD A
Sbjct: 449 SKIAFFLLQNHHRVLIAAADTFRSGAVEQLRVHVDRLKELSQREGGHVDLFEKGYGKDAA 508
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+A +A+ AT+N +VVL+DTAGR +++ LM +L K L NPD +L VGEALVG D+
Sbjct: 509 NIAADAVTFATKNNFNVVLIDTAGRRHNDQRLMSSLEKFGKLANPDKILMVGEALVGTDS 568
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FN S P L DG +++K DT+ D VG +SM A F+G +
Sbjct: 569 VAQARNFNA-----SFGPGRNL-DGFVISKCDTVGDMVGTLVSM-KTPPAGQGFLGWIKK 621
Query: 572 YTDL 575
+T+L
Sbjct: 622 FTNL 625
>gi|70984356|ref|XP_747692.1| signal sequence receptor alpha subunit [Aspergillus fumigatus
Af293]
gi|66845319|gb|EAL85654.1| signal sequence receptor alpha subunit, putative [Aspergillus
fumigatus Af293]
gi|159122478|gb|EDP47599.1| signal sequence receptor alpha subunit, putative [Aspergillus
fumigatus A1163]
Length = 649
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 215/410 (52%), Gaps = 72/410 (17%)
Query: 246 KKNRVWD-----DSPPESKLDFTDPAGGNGSNIEVEAADHGESM---MDKEEVFSSD--S 295
KK R WD D LD++ PA G + V A ES K + D
Sbjct: 246 KKMRKWDADGFADEDDGKVLDYSAPADGEDAPAPVVEAVAQESWGRRTGKGQFVLKDLGD 305
Query: 296 ESEEDEEVGKHNKP-DAKKTGWFSS-------MFQSIAGKANLDKADLEPALKALKDRLM 347
E E H K + TG+ S F++I G L +ADLE LKA++D L+
Sbjct: 306 EVHSILENADHEKTKSSSSTGFVGSGVNALGGFFRNIVGGKVLTEADLEKPLKAMEDHLL 365
Query: 348 TKNVA--------------------------------AMEEALVRILTPRRSIDILRDVH 375
KNVA AME +L +ILTP S+D+LR++
Sbjct: 366 KKNVAREAAVRLCQGVQRELVGKKTGNFQSVDAALRSAMESSLRKILTPTSSLDLLREID 425
Query: 376 AAK------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
A + + +PYV+ VGVNGVGKSTNL K+ Y+LLQ+ V++AACDTFRSGAVEQ
Sbjct: 426 AVRSPTSKGQAPRPYVISIVGVNGVGKSTNLGKICYFLLQNNYRVLIAACDTFRSGAVEQ 485
Query: 430 LRTHARRL----------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQD 479
LR HAR L +V ++EKGY KD A VAK+A++ N DVVL+DTAGR +
Sbjct: 486 LRVHARNLKELSTRENAGEVELYEKGYGKDAANVAKDAVEYGAANHFDVVLIDTAGRRHN 545
Query: 480 NEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILL 539
++ LM +L K PD + VGEALVG D+V Q FNQ + +DG ++
Sbjct: 546 DQRLMSSLEKFAKFAKPDKIFMVGEALVGTDSVMQARNFNQAFG------TGRNLDGFII 599
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+K DT+ D VG +SMV+ +G P++F+G GQ Y DL+ L+V V L+K
Sbjct: 600 SKCDTVGDMVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWAVNLLMK 649
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY--- 57
MLE + T G++LW+ + +++LI +EE+ + SA Y
Sbjct: 1 MLEAFEVLTTSGVVLWSKSYA--PVGAHVVNSLINDVFIEEKVRAQNQAASSAAPIYKKE 58
Query: 58 --TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYS-----DF 109
TLKW + L+FVAVYQ +LHL ++D LL + F ++Y D R+ + F
Sbjct: 59 KYTLKWKQVKDFNLIFVAVYQSLLHLGWIDKLLDNVSTIFIDLYKDELRSTRARIIEYPF 118
Query: 110 DEMFRQLRKEAEARA 124
D+ F Q +E E A
Sbjct: 119 DKYFDQQVRELEDNA 133
>gi|425773869|gb|EKV12194.1| Signal sequence receptor alpha subunit, putative [Penicillium
digitatum PHI26]
gi|425782445|gb|EKV20354.1| Signal sequence receptor alpha subunit, putative [Penicillium
digitatum Pd1]
Length = 647
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 189/318 (59%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
F++I G L ++DLE LKA+++ L+ KNVA
Sbjct: 336 FFRNIVGGKVLTESDLEKPLKAMEEHLLKKNVAREAAVRLCEGVKREMIGKKTGNFQSTD 395
Query: 353 -----AMEEALVRILTPRRSIDILRDVHAA------KEQRKPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR+++A ++ +PYV+ VGVNGVGKSTNL+
Sbjct: 396 AALHVAMESSLRKILTPTSSLDLLREINAVVAPTTKQQAPRPYVMSIVGVNGVGKSTNLS 455
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGYEKDPA 451
K+ Y+LLQ+K V++AACDTFRSGAVEQLR HA RL+ V I++KGY KD A
Sbjct: 456 KICYFLLQNKYRVLIAACDTFRSGAVEQLRVHADRLKELSVRENTGDVEIYQKGYGKDAA 515
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A+ A N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 516 NVAKDAVDYAAANKFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 575
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 576 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 629
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 630 YGDLRGLSVPWAVSLLMK 647
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
MLE I T G++LW+ + + I++LI +EE+ + D A
Sbjct: 1 MLETFEILTTSGVVLWS--KAYAPVGAHVINSLINDVFIEEKVVPQNVTADGISPAFKKE 58
Query: 57 -YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDF 109
YTLKW E L+FVAVYQ +LHL ++D LL + F ++Y + R F
Sbjct: 59 KYTLKWKRVKEFDLIFVAVYQSLLHLGWIDKLLENISTIFIDLYKDQVKGNRVRIQTYRF 118
Query: 110 DEMFRQLRKEAE 121
D+ F Q +E E
Sbjct: 119 DQYFEQQVRELE 130
>gi|453088973|gb|EMF17013.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 696
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 192/328 (58%), Gaps = 52/328 (15%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
T S +F+++ G L K DLE ++A+++ L+ KNVA
Sbjct: 369 TSKLSGLFRNVVGGRALTKQDLEQPMQAMRNSLIEKNVAPEAAGRLCSSVETDLLNSKTA 428
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHAAKEQR--KPYVVVFVGVNGVGKSTN 399
+M AL +ILTP S+D+LR+++ E + +PYV+ VGVNGVGKSTN
Sbjct: 429 SFTSIDKTIRESMGRALTKILTPTSSLDLLRNINNTIEGQNPRPYVISIVGVNGVGKSTN 488
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-----------QVPIFEKGYEK 448
L+K+AY+LLQ+K V++ ACDTFRSGAVEQLR H R L V +FEKGY K
Sbjct: 489 LSKIAYFLLQNKFRVLVVACDTFRSGAVEQLRVHVRNLTELSRREANAGTVELFEKGYGK 548
Query: 449 DPAIVAKEAIQEATRNGS-----DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
D A VAK+A+ A+ G DVVL+DTAGR +++ LM +L+K L NPD + VG
Sbjct: 549 DAADVAKQAVAFASNAGGGNMLYDVVLIDTAGRRHNDQRLMSSLTKFGQLANPDKIFMVG 608
Query: 504 EALVGNDAVDQLSKFNQKLADLSSS--PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
EALVG D+V Q F ++ D N + +DG +++K DT+ D VG +SMV+ +G
Sbjct: 609 EALVGTDSVSQARHFAEQFVDRKGQMRSNGKGMDGFIISKCDTVGDMVGTLVSMVHATGI 668
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
PV+F+G GQ Y DL+ LNV V L+K
Sbjct: 669 PVVFLGVGQHYGDLRGLNVDWAVNKLMK 696
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 33/147 (22%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW ++ L I++LI +E+R + +A AA
Sbjct: 1 MLDAFEIVTSSGIVLW--RKHYAPLSPHVINSLINDVFIEDRHVHTASTTAAAAAAASNP 58
Query: 57 ---------------YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-- 99
YTLK+ ++GL+FVAVYQ +LHL +VD+LL K F+ Y
Sbjct: 59 ASSLASSADTYRKDKYTLKYATAKDVGLIFVAVYQSLLHLSWVDNLLTTAKALFTRRYAA 118
Query: 100 ----DPKR------TDYSDFDEMFRQL 116
P+ D DFD+ F L
Sbjct: 119 DLKPQPQHQQHVASIDTRDFDQTFDAL 145
>gi|358398038|gb|EHK47396.1| hypothetical protein TRIATDRAFT_145049 [Trichoderma atroviride IMI
206040]
Length = 661
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 187/320 (58%), Gaps = 54/320 (16%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
S +F++I G L KADLE A+K ++D L+ KNVA
Sbjct: 345 ISGLFRNIVGGKTLTKADLENAMKGMEDHLLRKNVAREAAVRLCESVEKELVGVKTGNFE 404
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKS 397
AME +L ++LTP S+D+LR++ + + + +PYV+ VGVNGVGKS
Sbjct: 405 SINAKIHSAMESSLTKMLTPTSSLDLLREIDSITSPPVTSLRKARPYVISIVGVNGVGKS 464
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEK 448
TNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L QV +++KGY K
Sbjct: 465 TNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGQVELYQKGYGK 524
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG
Sbjct: 525 DAATVAKDAVSHAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVG 584
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
D+V Q FN + + +DG +++K DT+ D VG +S+V+ + PV+FVG
Sbjct: 585 TDSVAQARNFNAAFG------SDRALDGFIISKCDTVGDMVGTLVSLVHATNVPVVFVGV 638
Query: 569 GQSYTDLKKLNVKSIVKTLL 588
GQ Y+DL+ +VK V LL
Sbjct: 639 GQHYSDLRNFSVKWAVGKLL 658
>gi|451855697|gb|EMD68988.1| hypothetical protein COCSADRAFT_77360 [Cochliobolus sativus ND90Pr]
Length = 1411
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 211/672 (31%), Positives = 309/672 (45%), Gaps = 142/672 (21%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA--- 55
ML+ I T G++LW T +G + I++LIR +EER + D AG+
Sbjct: 1 MLDTFEILTTSGVVLWSRTYVPVGTNV----INSLIRDVFIEERIQPQA---DDAGSKPA 53
Query: 56 ----AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY------DPKRTD 105
YTLKWT ++GL+FVAVYQ ++HL ++D LL ++ F +Y D +
Sbjct: 54 YKKDGYTLKWTAAKDVGLIFVAVYQSLVHLTWIDKLLDNVRALFIGLYGDKLQSDSSVVN 113
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
F F + E E ++ S ++T P ++ + N
Sbjct: 114 CDKFGSYFDRQMHELEGASDSGAPSIKLTTPESS-----------------------TDN 150
Query: 166 DDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ--KLRNK 223
D D ++ L+ + + + + V + T + S+L K R
Sbjct: 151 DSADDTAIKPAGLQKPQRPLYDTSADSTPVPTPDTSRPTTPAQ------SQLLTGKARPI 204
Query: 224 GGKKT-----------DTVVSKG---SNPDPKKKITKKNRVWDDSPPE----SKLDFTDP 265
GGK + VS G S K KK RVW + E S LD++
Sbjct: 205 GGKMSRRDKKKASAFSSAPVSSGDEASAKKKGKGSAKKGRVWGEFGAEEEDDSILDYSQS 264
Query: 266 -----AGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT------ 314
A GN + E++ G +K E D + E D + N K T
Sbjct: 265 DVQGNASGNETLEEIKQETWGRKT-NKGEFVLKDLDDEMDAIIAAQNAKRDKDTPAAAGG 323
Query: 315 ------GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------------- 352
G +F+++ G L K DL LK +++ L+ KNVA
Sbjct: 324 LVGSSLGAIGGLFRNVVGGKTLTKEDLAKPLKGMEEHLLRKNVAREAAVRLCESVERDLV 383
Query: 353 ----------------AMEEALVRILTPRRSIDILRDV-HAAKEQRKPYVVVFVGVNGVG 395
+ME+AL +ILTP S+D+LR++ H +PYV+ VGVNGVG
Sbjct: 384 GIKTPSFTTIETTIKSSMEKALTKILTPTSSLDLLREIQHTNSTTTRPYVLSIVGVNGVG 443
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGY 446
KSTNL+K+A++LLQ+ V++AA DTFRSGAVEQLR H RL V +FEKGY
Sbjct: 444 KSTNLSKIAFFLLQNHHRVLIAAADTFRSGAVEQLRVHVDRLKELSQREGGHVDLFEKGY 503
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
KD A +A +A+ AT+N +VVL+DTAGR +++ LM +L K L NPD +L VGEAL
Sbjct: 504 GKDAANIAADAVTFATKNNFNVVLIDTAGRRHNDQRLMSSLEKFGKLANPDKILMVGEAL 563
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM-- 564
VG D+V Q FN S P L DG +++K DT+ D L++++ P
Sbjct: 564 VGTDSVAQARNFNA-----SFGPGRNL-DGFVISKCDTVGDM--CLLTILFSEKTPPAGQ 615
Query: 565 -FVGCGQSYTDL 575
F+G + +T+L
Sbjct: 616 GFLGWVKKFTNL 627
>gi|83771777|dbj|BAE61907.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 607
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 187/318 (58%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F++I G L ++DLE LKA++D L+ KNVA
Sbjct: 296 LFRNIVGGKVLTESDLEKPLKAMEDHLLKKNVAREAAVRLCDGVQRELVGKKTGNFQSVD 355
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR++ +K+Q +PYV+ VGVNGVGKSTNL
Sbjct: 356 AALRQAMESSLRKILTPTSSLDLLREIDTVTSPTSKQQSPRPYVISIVGVNGVGKSTNLG 415
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ Y+LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY KD A
Sbjct: 416 KICYFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGYGKDAA 475
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A++ N DVVL+DTAGR +++ LM +L K PD + VGEALVG D+
Sbjct: 476 NVAKDAVEYGAANKFDVVLIDTAGRRHNDQRLMSSLEKFGKFAKPDKIFMVGEALVGTDS 535
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 536 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 589
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 590 YGDLRGLSVPWAVNLLMK 607
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSA---GAAY 57
MLE I T G++LW+ + I++LI +EE+ + + N Y
Sbjct: 1 MLEAFEILTTSGVVLWSKSYA--PVGAHIINSLINDVFIEEKVQIQAANAAYPVYKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
TLKW E L+FVAVYQ +LHL ++D LL + F +IY + R FD+
Sbjct: 59 TLKWKKVKEFNLIFVAVYQSLLHLGWIDKLLDNISTLFIDIYKDQLRSTRVRVVEYPFDK 118
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMN 138
F Q KE E + + VT N
Sbjct: 119 YFEQQVKELEDNSAPINSEGVVTGAEN 145
>gi|317148977|ref|XP_001823040.2| signal sequence receptor alpha subunit [Aspergillus oryzae RIB40]
gi|391871271|gb|EIT80431.1| signal recognition particle receptor, alpha subunit [Aspergillus
oryzae 3.042]
Length = 646
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 187/318 (58%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F++I G L ++DLE LKA++D L+ KNVA
Sbjct: 335 LFRNIVGGKVLTESDLEKPLKAMEDHLLKKNVAREAAVRLCDGVQRELVGKKTGNFQSVD 394
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR++ +K+Q +PYV+ VGVNGVGKSTNL
Sbjct: 395 AALRQAMESSLRKILTPTSSLDLLREIDTVTSPTSKQQSPRPYVISIVGVNGVGKSTNLG 454
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ Y+LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY KD A
Sbjct: 455 KICYFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGYGKDAA 514
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A++ N DVVL+DTAGR +++ LM +L K PD + VGEALVG D+
Sbjct: 515 NVAKDAVEYGAANKFDVVLIDTAGRRHNDQRLMSSLEKFGKFAKPDKIFMVGEALVGTDS 574
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 575 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 628
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 629 YGDLRGLSVPWAVNLLMK 646
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSA---GAAY 57
MLE I T G++LW+ + I++LI +EE+ + + N Y
Sbjct: 1 MLEAFEILTTSGVVLWSKSYA--PVGAHIINSLINDVFIEEKVQIQAANAAYPVYKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
TLKW E L+FVAVYQ +LHL ++D LL + F +IY + R FD+
Sbjct: 59 TLKWKKVKEFNLIFVAVYQSLLHLGWIDKLLDNISTLFIDIYKDQLRSTRVRVVEYPFDK 118
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMN 138
F Q KE E + + VT N
Sbjct: 119 YFEQQVKELEDNSAPINSEGVVTGAEN 145
>gi|238494260|ref|XP_002378366.1| signal sequence receptor alpha subunit, putative [Aspergillus
flavus NRRL3357]
gi|220695016|gb|EED51359.1| signal sequence receptor alpha subunit, putative [Aspergillus
flavus NRRL3357]
Length = 646
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 187/318 (58%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F++I G L ++DLE LKA++D L+ KNVA
Sbjct: 335 LFRNIVGGKVLTESDLEKPLKAMEDHLLKKNVAREAAVRLCDGVQRELVGKKTGNFQSVD 394
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+LR++ +K+Q +PYV+ VGVNGVGKSTNL
Sbjct: 395 AALRQAMESSLRKILTPTSSLDLLREIDTVTSPTSKQQSPRPYVISIVGVNGVGKSTNLG 454
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ Y+LLQ+ V++AACDTFRSGAVEQLR HAR L QV ++EKGY KD A
Sbjct: 455 KICYFLLQNNYRVLIAACDTFRSGAVEQLRVHARNLKELSARENVGQVELYEKGYGKDAA 514
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A++ N DVVL+DTAGR +++ LM +L K PD + VGEALVG D+
Sbjct: 515 NVAKDAVEYGAANKFDVVLIDTAGRRHNDQRLMSSLEKFGKFAKPDKIFMVGEALVGTDS 574
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ + +DG +++K DT+ D VG +SMV+ +G P++F+G GQ
Sbjct: 575 VMQARNFNQAFG------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQH 628
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 629 YGDLRGLSVPWAVNLLMK 646
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSA---GAAY 57
MLE I T G++LW+ + I++LI +EE+ + + N Y
Sbjct: 1 MLEAFEILTTSGVVLWSKSYA--PVGAHIINSLINDVFIEEKVQIQAANAAYPVYKKEKY 58
Query: 58 TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFDE 111
LKW E L+FVAVYQ +LHL ++D LL + F +IY + R FD+
Sbjct: 59 ALKWKKVKEFNLIFVAVYQSLLHLGWIDKLLDNISTLFIDIYKDQLRSTRVRVVEYPFDK 118
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMN 138
F Q KE E + + VT N
Sbjct: 119 YFEQQVKELEDNSAPINSEGVVTGAEN 145
>gi|452989725|gb|EME89480.1| hypothetical protein MYCFIDRAFT_76824 [Pseudocercospora fijiensis
CIRAD86]
Length = 655
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 232/441 (52%), Gaps = 79/441 (17%)
Query: 228 TDTVVSKGSNPDPKKKITKKN----RVWD------DSPPESKLDFTDPAGGNGSNIEVEA 277
T S G D + K +K N R WD D + LD++ A N + +
Sbjct: 215 TSAPASSGDESDRRPKSSKGNVKSKRRWDADGLAVDGDDDQVLDYSAAATPNLEDEKSLD 274
Query: 278 ADH------------GESMMDK--EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSS---- 319
DH G+ ++ +EV + +ES++ + K K D+ G SS
Sbjct: 275 VDHIKADQMGSRTGKGQFVLKDLDDEVNAILAESKQQQAEAKVEKLDSGLLGSASSKITG 334
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F+++ G L K DL+ L +++ L+ KNVA
Sbjct: 335 LFRNVVGGKTLSKEDLKQPLLQMQNHLLEKNVAREAAERLCASVEADLLNQRTASFTSIE 394
Query: 353 -----AMEEALVRILTPRRSIDILRDVHAAKE--QRKPYVVVFVGVNGVGKSTNLAKVAY 405
+M +AL RILTP S+D+LR+++ E +PYV+ VGVNGVGKSTNL+K+AY
Sbjct: 395 KTIHESMIKALTRILTPSTSLDLLRNINKTIEGPNARPYVISIVGVNGVGKSTNLSKIAY 454
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGYEKDPAIVAK 455
+LLQ+ V++ ACDTFRSGAVEQLR H R L+ V +FEKGY KD A VAK
Sbjct: 455 FLLQNNFRVLITACDTFRSGAVEQLRVHVRNLEELSRREKVGHVELFEKGYGKDAADVAK 514
Query: 456 EAIQEATRNGS-----DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
+A+ AT G DVVL+DTAGR +++ LM +L+K L NPD + VGEALVG D
Sbjct: 515 QAVTFATNAGKGNMLFDVVLIDTAGRRHNDQRLMSSLTKFGQLANPDKIFMVGEALVGTD 574
Query: 511 AVDQLSKFNQKLADLSSSPNPQLI--DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
+V Q F ++ D + DG +++K DT+ D VG +SMV+ +G PV+F+G
Sbjct: 575 SVAQARHFAEQFVDTKGVRRNGGVGMDGFIISKCDTVGDMVGTLVSMVHATGIPVVFLGV 634
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
GQ Y DL+ LNV+ V L+K
Sbjct: 635 GQHYGDLRGLNVEWAVTKLMK 655
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 23/133 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER-------SGLASFNYDSA 53
ML+ I T G++LW ++ L+ I++LI +EER S + ++ D
Sbjct: 1 MLDAFEIITTSGIVLW--RKHYTPLQPKLINSLISDVFIEERQKSAEGDSTVPTYRKDK- 57
Query: 54 GAAYTLKWTFHN---ELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP-------KR 103
YTL++T ++GL+FVAVYQ +LHL +V+DLL ++ F++ Y +
Sbjct: 58 ---YTLRYTTAKTAKDVGLIFVAVYQSLLHLSWVNDLLIAVRGIFTKQYKADLDNKHVTK 114
Query: 104 TDYSDFDEMFRQL 116
D +FD+ F L
Sbjct: 115 IDTREFDQTFDAL 127
>gi|398403727|ref|XP_003853330.1| hypothetical protein MYCGRDRAFT_71375 [Zymoseptoria tritici IPO323]
gi|339473212|gb|EGP88306.1| hypothetical protein MYCGRDRAFT_71375 [Zymoseptoria tritici IPO323]
Length = 673
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 187/327 (57%), Gaps = 51/327 (15%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
T S +F+++ G L + DL PAL +++ L+ KN+A
Sbjct: 347 TSKISGLFRNVVGGKKLTRQDLAPALLQMRNHLLEKNIAREAAERLCDSVETDLLNSTTA 406
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHAAKE--QRKPYVVVFVGVNGVGKSTN 399
+M +AL RILTP S+D+LR++ + E +PYV+ VGVNGVGKSTN
Sbjct: 407 SFTSIDKTIRESMAKALTRILTPTSSLDLLRNITSTVEGTNPRPYVISIVGVNGVGKSTN 466
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKD 449
L+K+AY+LLQ+K V++ A DTFRSGAVEQLR H R L V +FEKGY KD
Sbjct: 467 LSKIAYFLLQNKFRVLVVAADTFRSGAVEQLRVHVRNLTELARRENVGHVELFEKGYGKD 526
Query: 450 PAIVAKEAIQEATRNGS-----DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
A VA++A+ AT G DVVLVDTAGR ++ LM +L+K L NPD + VGE
Sbjct: 527 AATVARDAVAHATNAGKGNMLFDVVLVDTAGRRHNDARLMSSLTKFGQLANPDKIFMVGE 586
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLI--DGILLTKFDTIDDKVGAALSMVYVSGAP 562
ALVG D+V Q F ++ D + DG +++K DT+ D VG +SMV+ +G P
Sbjct: 587 ALVGTDSVAQARNFAKEFVDTKGQMRNGGVGMDGFIISKCDTVGDMVGTLVSMVHATGIP 646
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLLK 589
V+F+G GQ Y DL+ LNV V L+K
Sbjct: 647 VVFLGVGQHYGDLRGLNVDWAVGKLMK 673
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERS------GLASFNYDSAG 54
ML+ I T G++LW ++ L + I+ LI +EER G AS Y
Sbjct: 1 MLDAFEIVTASGVVLW--RKHYAPLSANVINGLINDVFIEERQKPGAQEGSASAPYRKD- 57
Query: 55 AAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK-------RTDYS 107
YTL++T ++GL+FVAVYQ +LHL +V+DLL +K F + Y + R +
Sbjct: 58 -KYTLRFTTAKDVGLIFVAVYQSLLHLSWVNDLLTAVKALFVKQYGAELKKQNFVRVSTT 116
Query: 108 DFDEMFRQL 116
DFD F L
Sbjct: 117 DFDPTFDAL 125
>gi|67540914|ref|XP_664231.1| hypothetical protein AN6627.2 [Aspergillus nidulans FGSC A4]
gi|40738966|gb|EAA58156.1| hypothetical protein AN6627.2 [Aspergillus nidulans FGSC A4]
gi|259480207|tpe|CBF71127.1| TPA: signal sequence receptor alpha subunit, putative
(AFU_orthologue; AFUA_6G03850) [Aspergillus nidulans
FGSC A4]
Length = 636
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 217/426 (50%), Gaps = 75/426 (17%)
Query: 229 DTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGN---GSNIEVEAADH 280
D V KG P KK+ RVWD D LD++ PA + +E A +
Sbjct: 221 DEQVRKGKTPKSGKKL----RVWDADGLADEDDGRVLDYSAPAEADDAVAPTVEAVAQES 276
Query: 281 GESMMDKEEVFSSDSESE-------EDEEVGKHNKPDAKKTGWFSS---MFQSIAGKANL 330
K + D E D + + P FS+ + ++I G L
Sbjct: 277 WGRRTGKGQFVLKDLGDEVHSILENADNKKATSSAPSGLVGSGFSAIGGLLRNIVGGKIL 336
Query: 331 DKADLEPALKALKDRLMTKNVA--------------------------------AMEEAL 358
+ADLE LKA++D L+ KNVA AME +L
Sbjct: 337 TEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVKQELVGKKTGNFQSVDAALKSAMESSL 396
Query: 359 VRILTPRRSIDILRDVHAAKEQRK-----PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+ILTP S+D+L ++ + K PYV+ VGVNGVGKSTNL K+ Y+LLQ+
Sbjct: 397 RKILTPTSSLDLLHEIDTVTKANKQGTSRPYVISIVGVNGVGKSTNLGKICYFLLQNNYR 456
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGYEKDPAIVAKEAIQEATR 463
+++AACDTFRSGAVEQLR HAR L+ V ++EKGY KD A VAK+A++
Sbjct: 457 ILIAACDTFRSGAVEQLRVHARNLKELSARENVGAVELYEKGYGKDAANVAKDAVEYGAA 516
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
N DVVL+DTAGR +++ LM +L K P+ + VGEALVG D+V Q FNQ
Sbjct: 517 NNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPNKIFMVGEALVGTDSVMQARNFNQAFG 576
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
+ +DG +++K DT+ D VG +SMV+ +G P++F+G GQ Y DL+ L+V
Sbjct: 577 ------TGRNLDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQHYGDLRGLSVPWA 630
Query: 584 VKTLLK 589
V L+K
Sbjct: 631 VNLLMK 636
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----A 56
MLE I + G++LW+ + +++L+ +EE++ L + +
Sbjct: 1 MLEAFEILSTSGVVLWSKSYA--PVGAHVVNSLVNDVFIEEKAQLQNATNSVSPIFKKEK 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYSDFD 110
YTLKW + L+FVAVYQ +LHL ++D LL + F ++Y + R FD
Sbjct: 59 YTLKWRKSKDFNLIFVAVYQSLLHLGWIDKLLDNISTIFVDLYKTQLQSERARIVQYPFD 118
Query: 111 EMFRQLRKEAEARA 124
+ F Q +E E A
Sbjct: 119 KYFDQQVQELEDNA 132
>gi|242780873|ref|XP_002479687.1| signal sequence receptor alpha subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218719834|gb|EED19253.1| signal sequence receptor alpha subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 644
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 185/318 (58%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F++I G L + DLE LKA++D LM KNVA
Sbjct: 333 LFRNIVGGKILREEDLEKPLKAMEDHLMKKNVAREAALRLCEGVKQELVGKKTANFQSVD 392
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+L ++ A AKEQ +PYV+ VGVNGVGKSTNL+
Sbjct: 393 AALRSAMEASLRKILTPTSSLDLLHEIQAVTAPTAKEQAPRPYVISIVGVNGVGKSTNLS 452
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ ++LLQ+ V++AACDTFRSGAVEQLR H R L +V ++EKGY KD A
Sbjct: 453 KICFFLLQNNYRVLVAACDTFRSGAVEQLRVHVRNLTELSARENIGEVELYEKGYGKDAA 512
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A+ N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 513 NVAKDAVAYGAANKFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 572
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ P L DG +++K DT+ D VG +SMV+ + P++F+G GQ
Sbjct: 573 VMQARNFNQAFG-----PGRNL-DGFIISKCDTVGDMVGTLVSMVHATSIPIVFLGVGQH 626
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 627 YGDLRGLSVPWAVGLLMK 644
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 1 MLEQLLIFTRGGLILWT--CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA-- 56
ML+ I T G++LW+ +G+ + I++LI +EE+ D A A
Sbjct: 1 MLDAFEIVTTSGVVLWSRSYAPVGSHI----INSLISEVFIEEKV----IPTDGASTAFK 52
Query: 57 ---YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYS 107
YTLKW +LGL+FVAVYQ +LHL +VD LL + F ++Y + R
Sbjct: 53 KEKYTLKWRRAKDLGLIFVAVYQSLLHLSWVDKLLDNIAIIFVDVYKDQLKNTRARIYEY 112
Query: 108 DFDEMFRQLRKEAE 121
FD+ F Q +E E
Sbjct: 113 PFDKYFDQQVRELE 126
>gi|150864210|ref|XP_001382942.2| GTP binding signal recognition particle receptor [Scheffersomyces
stipitis CBS 6054]
gi|149385466|gb|ABN64913.2| GTP binding signal recognition particle receptor [Scheffersomyces
stipitis CBS 6054]
Length = 545
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 214/417 (51%), Gaps = 76/417 (18%)
Query: 228 TDTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPAGGNGS---------NI 273
T T V + P KK+ R WD ++ S LD++ A G+ NI
Sbjct: 148 TSTPVRRNVKQTPNKKM----RKWDGDEMVENVDNSVLDYSASADGDVDGALGDDRVLNI 203
Query: 274 EVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKA 333
+ A H ++ E+ +ES++DE+ K D K G+FS + + G
Sbjct: 204 DDSAFVHENELVLVNELNDILNESDDDED-----KNDGKAGGFFSKITSFLGGSI----- 253
Query: 334 DLEPALKALKDRLMTKNVA----------------------------AMEEALVRILTPR 365
D+E K D+L++KN+A + E L +ILTP
Sbjct: 254 DIEDVSKKFNDQLISKNIAPNTAKIIIDKIRDKLGNQRNVTLALYKQTLTEELTKILTPN 313
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
S D+L D+ +PYV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACDTFRSG
Sbjct: 314 VSTDLLYDIKRNSTNPRPYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSG 373
Query: 426 AVEQLRTHARRLQ------------VPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLV 471
AVEQL+ H LQ + IFEKGY +V AK AIQ A D+VL+
Sbjct: 374 AVEQLKVHVNNLQRLNSQSSNGENKIDIFEKGYGSGDHVVTTAKMAIQHAASEKFDIVLI 433
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR N LM L K NPD ++ VGEALVG D+V+Q FN N
Sbjct: 434 DTAGRTHSNTKLMAPLKKFGDAANPDKIIMVGEALVGTDSVEQAINFNNAFG------NK 487
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ +D +++K DT+ D VG ++MV + P++FVG GQ+YTD+K+L+VK +V L+
Sbjct: 488 RSLDFFIISKVDTVGDLVGTMINMVMATKVPILFVGTGQTYTDIKRLSVKRVVDMLM 544
>gi|212526426|ref|XP_002143370.1| signal sequence receptor alpha subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210072768|gb|EEA26855.1| signal sequence receptor alpha subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 645
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 185/318 (58%), Gaps = 54/318 (16%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F++I G L + DLE LKA++D LM KNVA
Sbjct: 334 LFRNIVGGKTLTEEDLEKPLKAMEDHLMKKNVAREAALRLCEGVKQELVGKKTANFQSVD 393
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-----AKEQR-KPYVVVFVGVNGVGKSTNLA 401
AME +L +ILTP S+D+L ++ A AK Q +PYV+ VGVNGVGKSTNL+
Sbjct: 394 AALRTAMEASLRKILTPTSSLDLLHEIQAVTAPIAKGQAPRPYVISIVGVNGVGKSTNLS 453
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKDPA 451
K+ ++LLQ+ V++AACDTFRSGAVEQLR H R L +V ++EKGY KD A
Sbjct: 454 KICFFLLQNNYRVLVAACDTFRSGAVEQLRVHVRNLTELSARENIGEVELYEKGYGKDAA 513
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A+ N DVVL+DTAGR +++ LM +L K NPD + VGEALVG D+
Sbjct: 514 NVAKDAVAYGAANKFDVVLIDTAGRRHNDQRLMSSLEKFAKFANPDKIFMVGEALVGTDS 573
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FNQ S N +DG +++K DT+ D VG +SMV+ + P++F+G GQ
Sbjct: 574 VMQARNFNQAFG---SGRN---LDGFIISKCDTVGDMVGTLVSMVHATSIPIVFLGVGQH 627
Query: 572 YTDLKKLNVKSIVKTLLK 589
Y DL+ L+V V L+K
Sbjct: 628 YGDLRGLSVPWAVGLLMK 645
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 1 MLEQLLIFTRGGLILWT--CKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA-- 56
ML+ I T G++LW+ +G+ + I++LI +EE+ D A A
Sbjct: 1 MLDAFEIVTTSGVVLWSRSYAPVGSHI----INSLISEVFIEEKV----VPTDGASTAFK 52
Query: 57 ---YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK------RTDYS 107
YTLKW +LGL+FVAVYQ +LHL +VD LL + F ++Y + R
Sbjct: 53 KEKYTLKWRRAKDLGLIFVAVYQSLLHLSWVDKLLDNIAIIFVDLYKDQLKSSRARIYEY 112
Query: 108 DFDEMFRQLRKEAE 121
FD+ F Q +E E
Sbjct: 113 PFDKYFDQQVRELE 126
>gi|449298846|gb|EMC94861.1| hypothetical protein BAUCODRAFT_73744 [Baudoinia compniacensis UAMH
10762]
Length = 649
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 190/330 (57%), Gaps = 54/330 (16%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
T + +F++ G A L K+ L+ L A+++ L+ KNVA
Sbjct: 320 TSRLTGLFRNALGGATLTKSSLQQPLAAMRNHLLEKNVAREAADRLCASVETDLLNQKTA 379
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHAAKE--QRKPYVVVFVGVNGVGKSTN 399
+ME+AL RILTP S+D+LRDV +PYV+ VGVNGVGKSTN
Sbjct: 380 SFTSIDKTIRESMEKALTRILTPTSSLDLLRDVTTTTTGPSARPYVISIVGVNGVGKSTN 439
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKD 449
L+K+AY+LLQ+ V++ A DTFRSGAVEQLR H R L +V +FEKGY KD
Sbjct: 440 LSKIAYFLLQNHFRVLIVAGDTFRSGAVEQLRVHVRNLSELARREAVGRVELFEKGYGKD 499
Query: 450 PAIVAKEAIQEATRNGS--------DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
A VAKEA+ A+ N DVVL+DTAGR ++ LM +L+K L NPD +
Sbjct: 500 AASVAKEAVSYASNNTGKGGGEMLYDVVLIDTAGRRHNDTRLMSSLTKFGQLANPDKIFM 559
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSS--PNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
VGEALVG+D+V Q F ++ D + N +DG +++K DT+ D VG +SMV+ +
Sbjct: 560 VGEALVGSDSVAQARNFAKEFVDTKGNLRNNGVGMDGFIISKCDTVGDMVGTLVSMVHAT 619
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G PV+F+G GQ Y DL+ LNV V+ L++
Sbjct: 620 GIPVVFLGVGQHYGDLRGLNVGWAVERLMR 649
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ I T G++LW ++ + S +D LIR +EE+ ++ Y YTLK
Sbjct: 1 MLDAFEILTTSGIVLW--RKHYAPIAPSIVDGLIRDVFIEEKQSPSNEQYRKE--RYTLK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
W+ ++GLVFVAVYQ +LHL +VD+LL +K F + Y
Sbjct: 57 WSLAKDVGLVFVAVYQSLLHLSWVDNLLTAVKALFVKEY 95
>gi|164657404|ref|XP_001729828.1| hypothetical protein MGL_2814 [Malassezia globosa CBS 7966]
gi|159103722|gb|EDP42614.1| hypothetical protein MGL_2814 [Malassezia globosa CBS 7966]
Length = 540
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 271/580 (46%), Gaps = 154/580 (26%)
Query: 63 FHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD-----------PKRT------D 105
NEL L F+A++QRIL L YVD LL +K+ F+ + P+ T
Sbjct: 1 MSNELELTFLAIHQRILQLTYVDALLQSVKERFTARFKDVLKTLPSFSAPRETLSSFASS 60
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQV-TKPMNNLKKQGGQLQKGGFERGSNRSGGGSA 164
++ +D F QL ++ E+ ++K+ + P +K +
Sbjct: 61 FASWDAEFLQLVRQHESNNAKMKRDRLAGVLPSETPQKD-------------------VS 101
Query: 165 NDDGDSDNMRGRKLENGHSNVGNVE-IEESRVTGVANGKENTSSNIGAFDVSKLQKLRNK 223
+ G + + LEN S E ++ ++ A G+ S K++K +K
Sbjct: 102 DVSGSATSPTTVTLENSTSERSKTEPLKGTKAAMSAGGRRVVS--------GKMKK--SK 151
Query: 224 GGKKTDTVVSKGSNPDPKKKIT---KKNRVWDDSPPE------SKLDFTDPAGGNGSNIE 274
G TV P+P+ K + K R WD S + LDF+ + ++
Sbjct: 152 GA----TVAQADPVPEPQAKKSVPGKTQRKWDTSKAAVSQGEIASLDFSQDTSQSKVDLS 207
Query: 275 --VEAADHGESMMDKEEVFSSDSESEEDEE---------VGKHNKPDAKKTGWFSSMFQS 323
++ G D + D +E G+ + ++ TG SS+
Sbjct: 208 PWIDETKLGTKRSDGIYELAEDDLAETSTSGPGLFAMLGSGRASSLLSRLTGAKSSL--- 264
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNV-------------------------------- 351
GK +LD P L+A++ L +KNV
Sbjct: 265 --GKQDLD-----PILQAMQTHLQSKNVASDVAALICEGVEKRLIGKKIGNFGSVKAEVR 317
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRK--------------------PYVVVFVGV 391
A++ +++ RILTP S DIL D+ + K++R PY + FVGV
Sbjct: 318 ASLNDSITRILTPSTSTDILLDIASKKQRRSELLATLPAHAVRGNVSPSLNPYSIGFVGV 377
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------- 437
NGVGKSTNLAKV +WLLQ++ V++AACDTFRSGAVEQLRTH R L
Sbjct: 378 NGVGKSTNLAKVCFWLLQNRYRVLIAACDTFRSGAVEQLRTHVRNLGELEVDGHRVADGA 437
Query: 438 ------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI 491
+ ++E+GY KD A +AK+A+ A G DVVL+DTAGRMQDNEPLMRAL+KLI
Sbjct: 438 PGTGAAMLELYERGYGKDAAGIAKDALAYARNEGFDVVLIDTAGRMQDNEPLMRALAKLI 497
Query: 492 YLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
+N PD VLFVGEALVGN+AVDQL+KFN+ L D S +P
Sbjct: 498 AVNQPDKVLFVGEALVGNEAVDQLTKFNRALKDYSGMSSP 537
>gi|330907618|ref|XP_003295869.1| hypothetical protein PTT_03573 [Pyrenophora teres f. teres 0-1]
gi|311332427|gb|EFQ96034.1| hypothetical protein PTT_03573 [Pyrenophora teres f. teres 0-1]
Length = 1411
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 207/669 (30%), Positives = 316/669 (47%), Gaps = 137/669 (20%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----- 55
ML+ + T G++LW+ + + + I++LIR +EER + + AG+
Sbjct: 1 MLDTFEVLTTSGVVLWSRTYV--PVGANVINSLIRDVFIEERIQPQA---EDAGSKPTYK 55
Query: 56 --AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK-RTDYSD---- 108
YTLKWT +LGL+FVAVYQ ++HL ++D LL ++ F +Y + +T S
Sbjct: 56 KEGYTLKWTAAKDLGLIFVAVYQSLVHLTWIDKLLENVRALFVGLYGEQLKTQNSSVVKC 115
Query: 109 --FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAND 166
F F + +E E ++ S ++ P ++ + ND
Sbjct: 116 DKFGSYFDRQMQELEGASDSGTPSIKLITPESS-----------------------TDND 152
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ--KLRNKG 224
D ++ L+ ++ + + + + + T + S+L K R G
Sbjct: 153 SADETALKPPGLQKAQQSLYDTSADSTPMPTPDTSRPTTPAQ------SQLLTGKARPLG 206
Query: 225 GKKT-----------DTVVSKG--SNPDPKKKITKKNRVW--------DDSPPE-SKLDF 262
GK + VS G ++ K K +KK RVW DDS + S+ D
Sbjct: 207 GKMSRRDKKKASAFSSAPVSSGDEASAKKKGKGSKKGRVWGEFGAEEEDDSVLDYSRSDI 266
Query: 263 TDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNK------PDA----- 311
GN + E++ G +K E D + E D + + N P A
Sbjct: 267 QGDVSGNEALEEIKQETWGRKT-NKGEFVLRDLDDEMDAIIAEQNAKKDKDAPAAASGLV 325
Query: 312 -KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------ 352
G +F+++ G L K DL LK +++ L+ KNVA
Sbjct: 326 GSSLGAIGGLFRNVVGGKTLTKEDLAKPLKGMEEHLLRKNVAREAAVRLCESVERDLVGI 385
Query: 353 --------------AMEEALVRILTPRRSIDILRDV-HAAKEQRKPYVVVFVGVNGVGKS 397
+ME+AL +ILTP S+D+LR++ H +PYV+ VGVNGVGKS
Sbjct: 386 KTPNFTTIEKTFKASMEKALTKILTPTSSLDLLREIQHTNSTTTRPYVLSIVGVNGVGKS 445
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEK 448
TNL+K+A++LLQ+ V++AA DTFRSGAVEQLR H RL QV +FEKGY K
Sbjct: 446 TNLSKIAFFLLQNHHRVLIAAADTFRSGAVEQLRVHVDRLKELSQREGGQVELFEKGYGK 505
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A +A +A+ AT+N ++VL+DTAGR +++ LM +L K L NPD +L VGEALVG
Sbjct: 506 DAANIAADAVTFATKNNFNIVLIDTAGRRHNDQRLMSSLEKFGKLANPDKILMVGEALVG 565
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
D+V Q FN +S + +DG +++K DT+ D + L+ V+ P + C
Sbjct: 566 TDSVAQARNFN------ASFGVGRTLDGFIISKCDTVGDML---LTDVFREKTPSVGSSC 616
Query: 569 -GQSYTDLK 576
G+ T LK
Sbjct: 617 VGRFKTFLK 625
>gi|448121616|ref|XP_004204255.1| Piso0_000087 [Millerozyma farinosa CBS 7064]
gi|358349794|emb|CCE73073.1| Piso0_000087 [Millerozyma farinosa CBS 7064]
Length = 547
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 220/403 (54%), Gaps = 64/403 (15%)
Query: 240 PKKKITKKNRVW------DDSPPESKLDFT--DPAGGNGSNIEVE----AADHGESMMDK 287
+K + KK R W DD+ S+LDF+ + NGSN +++ A + ++
Sbjct: 156 AQKTVKKKMRRWNNGEVVDDNADASELDFSKEEELKANGSNRDIDFDQNAFERENDLVLV 215
Query: 288 EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLM 347
EE+ ++ + +ED E + + G+F+ + G+ DL K D+L+
Sbjct: 216 EELKNALDDDDEDSEDESTSNSGTFRRGFFNKVMSYFGGEV-----DLNTLSKQFHDQLI 270
Query: 348 TKNVAA----------------------------MEEALVRILTPRRSIDILRDVHAAKE 379
KN++A ++ L +IL+P S D+L ++ + +
Sbjct: 271 AKNISAGTSKTILDRIQSQFGKKKTVSLEAFKSALQVELTKILSPNVSTDLLFEIKSKSQ 330
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-- 437
+ KPYV+ VGVNGVGKSTNLAK+A+WLLQ+ ++V++ ACDTFRSGAVEQL+ HA L
Sbjct: 331 KGKPYVISVVGVNGVGKSTNLAKLAFWLLQNNLNVLICACDTFRSGAVEQLKIHANNLSA 390
Query: 438 ---------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
++ IFEKGY +V AK AI+ A G +VVL+DTAGR N LM
Sbjct: 391 LNKSSASTSKINIFEKGYGGGNHVVATAKSAIEHAENEGYNVVLIDTAGRTHSNAKLMAP 450
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L K NPD ++ VGEALVG+D+V+Q FN + +D +++K DT+
Sbjct: 451 LKKFGDAANPDKIIMVGEALVGSDSVEQAINFNNAFG------TKRNLDFFIISKVDTVG 504
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D VG ++MV + P++F+G GQ+YTD+K+L+VKS+V LLK
Sbjct: 505 DMVGTMINMVMATNVPILFIGTGQTYTDIKRLSVKSVVDMLLK 547
>gi|310791224|gb|EFQ26753.1| SRP54-type protein [Glomerella graminicola M1.001]
Length = 663
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 186/317 (58%), Gaps = 54/317 (17%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F+++ G L KADL+ A+K +++ L+ KNVA
Sbjct: 350 LFRNVVGGKTLTKADLDKAMKGMEEHLLKKNVAREAAVRLCEGVEKELLGVKTGSFESIN 409
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNL 400
AME +L ++LTP S+D+LR++ A + + +PYV+ VGVNGVGKSTNL
Sbjct: 410 AKIQAAMEASLTKMLTPTSSLDLLREIDAITAPPATSLRRARPYVISIVGVNGVGKSTNL 469
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKDPA 451
+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L V +++KGY KD A
Sbjct: 470 SKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTVREGGHVELYQKGYGKDAA 529
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VA++A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG D+
Sbjct: 530 TVARDAVSHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVGTDS 589
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FN + + +DG +++K DT+ + VG +S+V+ + PV+FVG GQ
Sbjct: 590 VAQARNFNAAFGAV------RTLDGFIISKCDTVGNMVGTLVSLVHATNVPVLFVGVGQH 643
Query: 572 YTDLKKLNVKSIVKTLL 588
Y+DL+ +VK V+ LL
Sbjct: 644 YSDLRNFSVKWAVEKLL 660
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAY--- 57
ML+ I T G++LW+ + S I+ I +EE+ G AS ++ Y
Sbjct: 1 MLDTFEILTTSGVVLWS--RTYAPINPSVINNFIADVFIEEKGGAASSQSAASNPPYKRD 58
Query: 58 --TLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT-------DYSD 108
TL++TF ELG++FVAVY+ +LHL ++D L+ +K F ++Y + T +
Sbjct: 59 QHTLRYTFVKELGVIFVAVYRSLLHLSWIDKLVDNIKTIFVDLYGEQLTKPHTTLVECHK 118
Query: 109 FDEMFRQLRKEAE 121
FDE F Q +E E
Sbjct: 119 FDEYFDQQVRELE 131
>gi|380477261|emb|CCF44256.1| signal recognition particle receptor subunit alpha [Colletotrichum
higginsianum]
Length = 411
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 187/317 (58%), Gaps = 54/317 (17%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F+++ G L KADL+ A+K +++ L+ KNVA
Sbjct: 98 LFRNVVGGKTLTKADLDKAMKGMEEHLLKKNVAREAAVRLCEGVEKELLGVKTGNFESIN 157
Query: 353 -----AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKSTNL 400
AME +L ++LTP S+D+LR++ A + + +PYV+ VGVNGVGKSTNL
Sbjct: 158 ARIQAAMEASLTKMLTPTSSLDLLREIDAITAPPATSLRRARPYVISIVGVNGVGKSTNL 217
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKGYEKDPA 451
+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++KGY KD A
Sbjct: 218 SKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHXRNLKELTIREGGRVELYQKGYGKDAA 277
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VA++A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG D+
Sbjct: 278 TVARDAVSHAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVGTDS 337
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FN + + +DG +++K DT+ + VG +S+V+ + PV+FVG GQ
Sbjct: 338 VAQARNFNAAFGAVRT------LDGFIISKCDTVGNMVGTLVSLVHATNVPVLFVGVGQH 391
Query: 572 YTDLKKLNVKSIVKTLL 588
Y+DL+ +VK V+ LL
Sbjct: 392 YSDLRNFSVKWAVEKLL 408
>gi|401827599|ref|XP_003888092.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
gi|392999292|gb|AFM99111.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
Length = 424
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 175/258 (67%), Gaps = 14/258 (5%)
Query: 336 EPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
E L+++ +++ + ++ + L+ P S+D + + K+ + + + FVGVNGVG
Sbjct: 174 EEGLESVSEKIFKEKMSGVLSRLI----P--SVDHEKMLDRIKKHKGVFSICFVGVNGVG 227
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-----VPIFEKGYEKDP 450
KST+LAK+ YWLLQ+K+ V +AACDTFR+GA+EQL+ H R + V +EKGY KD
Sbjct: 228 KSTSLAKICYWLLQNKLKVYIAACDTFRAGAIEQLKIHVERFKLGGHLVGFYEKGYGKDD 287
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A VA+ AIQEA G DV+L+DTAGRM + + LM +L+KLI +N PD +++VGEALVG+D
Sbjct: 288 ASVARCAIQEAQHEGYDVILIDTAGRMHNKKNLMASLTKLIRINGPDHIIYVGEALVGSD 347
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
++D + +FN+ + D S ID ILLTK DT+D+K+G L+M + S AP++F+G GQ
Sbjct: 348 SLDHIREFNKAIGDAGQSKR---IDSILLTKVDTVDNKIGQILNMAFSSHAPILFLGVGQ 404
Query: 571 SYTDLKKLNVKSIVKTLL 588
S +DL + + IV +L+
Sbjct: 405 SNSDLSSIGSEDIVNSLM 422
>gi|68467725|ref|XP_722021.1| hypothetical protein CaO19.11434 [Candida albicans SC5314]
gi|46443968|gb|EAL03246.1| hypothetical protein CaO19.11434 [Candida albicans SC5314]
Length = 535
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 192/340 (56%), Gaps = 59/340 (17%)
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
SD E E+ +E + +G+FS + + G N+D+ K +++L+TKN+
Sbjct: 212 SDDEGEQVDETN-----GSVGSGFFSKISSYLGGTINVDEVS-----KKFREQLITKNIT 261
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDV-HAAKEQRKP 383
A+ + L +ILTP S D+L D+ A+ +P
Sbjct: 262 PGIATTIIDKIKTKLSSNKKVTMAVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRP 321
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------ 437
YV+ VGVNGVGKSTNLAK+A+W LQH ++V++ ACDTFRSGAVEQL+ H L
Sbjct: 322 YVISVVGVNGVGKSTNLAKLAFWFLQHNLNVLICACDTFRSGAVEQLKVHVTNLNRLNEA 381
Query: 438 ------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
++ IFEKGY +V AK+A+Q A N D+VL+DTAGR N LM L K
Sbjct: 382 STNTKSRIDIFEKGYGSGDHVVQTAKQAVQYAEENKFDIVLIDTAGRTHSNAKLMAPLKK 441
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
NP+ ++ VGEALVG D+V+Q + FN+ N + +D +++K DT+ D V
Sbjct: 442 FGDAANPNKIIMVGEALVGTDSVEQATNFNKAFG------NKRTLDFFIISKVDTVGDLV 495
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G ++MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 496 GTMINMVMATNVPILFVGTGQTYTDIKRLSVKQVVEMLMK 535
>gi|19074626|ref|NP_586132.1| SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|19069268|emb|CAD25736.1| SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
Length = 425
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 173/258 (67%), Gaps = 14/258 (5%)
Query: 336 EPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
E +K++ ++ + +A + L+ + +D +R + + + FVGVNGVG
Sbjct: 175 EEEIKSVSEKTFKEKMANVLSKLIPSVDHEEMLDRIRG------HKGVFSICFVGVNGVG 228
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-----VPIFEKGYEKDP 450
KST+LAK+ YWLLQ+K+ V +AACDTFR+GA+EQL+TH R + V +EKGY KD
Sbjct: 229 KSTSLAKICYWLLQNKLRVYIAACDTFRAGAIEQLKTHVERFKLGGHLVGFYEKGYGKDD 288
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A VA+ AIQEA G DV+L+DTAGRM + + LM +L+KL+ +N PD +++VGEALVG+D
Sbjct: 289 ASVARCAIQEAQHEGYDVILIDTAGRMHNKKNLMASLTKLMKINRPDHIIYVGEALVGSD 348
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
++D + +FN+ + D S ID ILLTK DT+DD++G L+M + S AP++F+G GQ
Sbjct: 349 SLDHIREFNKAIRDADQSRK---IDSILLTKVDTVDDRIGQILNMAFSSHAPILFLGVGQ 405
Query: 571 SYTDLKKLNVKSIVKTLL 588
S +DL K+ + IV +L+
Sbjct: 406 SNSDLSKIGSEDIVSSLM 423
>gi|449330218|gb|AGE96479.1| signal recognition particle receptor alpha subunit [Encephalitozoon
cuniculi]
Length = 425
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 173/258 (67%), Gaps = 14/258 (5%)
Query: 336 EPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVG 395
E +K++ ++ + +A + L+ + +D +R + + + FVGVNGVG
Sbjct: 175 EEEIKSVSEKTFKEKMANVLSKLIPSVDHEEMLDRIRG------HKGVFSICFVGVNGVG 228
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-----VPIFEKGYEKDP 450
KST+LAK+ YWLLQ+K+ V +AACDTFR+GA+EQL+TH R + V +EKGY KD
Sbjct: 229 KSTSLAKICYWLLQNKLRVYIAACDTFRAGAIEQLKTHVERFKLGGHLVGFYEKGYGKDD 288
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A VA+ AIQEA G DV+L+DTAGRM + + LM +L+KL+ +N PD +++VGEALVG+D
Sbjct: 289 ASVARCAIQEAQHEGYDVILIDTAGRMHNKKNLMASLTKLMKINRPDHIIYVGEALVGSD 348
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
++D + +FN+ + D S ID ILLTK DT+DD++G L+M + S AP++F+G GQ
Sbjct: 349 SLDHIREFNKAIRDADQSRK---IDSILLTKVDTVDDRIGQILNMAFSSHAPILFLGVGQ 405
Query: 571 SYTDLKKLNVKSIVKTLL 588
S +DL K+ + IV +L+
Sbjct: 406 SNSDLSKIGSEDIVSSLM 423
>gi|253748466|gb|EET02574.1| Signal recognition particle receptor [Giardia intestinalis ATCC
50581]
Length = 572
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 181/623 (29%), Positives = 294/623 (47%), Gaps = 98/623 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+QL GL++W + + PID LI +E+R+ + + + + L
Sbjct: 1 MLDQLAFVHTSGLVIWQSAKQPDVY---PIDQLITLVYVEKRAIPSPYILGN----HALH 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
+ + EL L +A+ + L + ++D+L M F + Y EA
Sbjct: 54 YLYIKELSLFAIAIIKHGLTIPGIEDILTAMTHLFIKDY-------------------EA 94
Query: 121 EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN 180
R ++ K+V +P + G L K G S G + + ++ G+ +
Sbjct: 95 SIRVLPIEYVKEVYQPFS--AHYDGNL-KSLISTGKTLSARGLSTQQNEQESATGKAAQM 151
Query: 181 GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP 240
N+ N E+ + V G + + + I + + LR K+ + +
Sbjct: 152 DPDNMDN-ELADPPVAGASINLADVKAKIKQMTFERQESLR--ASKRLSAQEEAKKSNET 208
Query: 241 KKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGES--MMD-KEEVFSSDSES 297
+ ++++ ++ SK+D + N + E EA G+S + D K VF+S E+
Sbjct: 209 ASQTKRRDQQAEEFLQYSKIDNGESPAANAIS-EQEAIRSGKSSHIADAKSLVFTSSKET 267
Query: 298 EEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---- 353
G F+S K L DLE L +L+ L+++NVA+
Sbjct: 268 ---------------IFGLFNS-------KKELTANDLEKLLSSLRQALLSQNVASEVAD 305
Query: 354 ---------MEEALVRILTPRRSIDI------------------LRDVHAAKEQR----- 381
+E + + + +S+ I L+ + AAKE+R
Sbjct: 306 ELLKGVSANLEGEKIGLFSRTKSLVIQTLKDSIRKIVQFEDRFLLKRILAAKEERAAGRR 365
Query: 382 -KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+PYV+ GVNGVGK+T++AK+ Y + ++ ACD+FRSGAVEQL+ H RL
Sbjct: 366 SRPYVICMTGVNGVGKTTSIAKLLYIFRNNDFRSLVCACDSFRSGAVEQLQEHCTRLGAT 425
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++ +GY K+ + +AK I+EA D+ L+DT GR +N PLM+AL L+ N PD+VL
Sbjct: 426 LYSQGYGKNASAIAKYGIKEAESLDYDICLIDTTGRQYNNGPLMQALGALVLENAPDVVL 485
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FVGEAL GN+ ++QL +F+ L S N + +DGI+LTKFDT DKVGAAL++ +V
Sbjct: 486 FVGEALTGNEGIEQLKQFD---CALRSYTNSRGVDGIILTKFDTCGDKVGAALNLCFVCN 542
Query: 561 APVMFVGCGQSYTDLKKLNVKSI 583
P+++VG GQSY D L+ I
Sbjct: 543 IPIIYVGTGQSYPDFAILDPSHI 565
>gi|149238239|ref|XP_001524996.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451593|gb|EDK45849.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 562
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 129/320 (40%), Positives = 185/320 (57%), Gaps = 52/320 (16%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
+ +K+G+FS + + G NLD+ K ++L++KN+A
Sbjct: 255 NGQKSGFFSKLSSYLGGSINLDEVS-----KKFYEQLISKNIAPGTAKAIIDKIKARLSG 309
Query: 353 ----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
A+ + L +ILTP S D+L ++ R PYV+ VGVNGVGKSTNLAK
Sbjct: 310 KKVTMTIFKQALTDELTKILTPNVSTDLLYEIKRNNTGR-PYVISVVGVNGVGKSTNLAK 368
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-----------QVPIFEKGYEKDPA 451
+AYW LQ+ ++V++ ACDTFRSGAVEQL+ H L Q+ I+EKGY
Sbjct: 369 LAYWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLNQLNSGLSNKSQIDIYEKGYGGGDH 428
Query: 452 IV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
+V AK+AI+ A N DVVL+DTAGR N LM L K NP+ ++ VGEALVG
Sbjct: 429 VVTTAKQAIEYAKANAFDVVLIDTAGRTHSNAKLMAPLKKFGDAANPNKIIMVGEALVGT 488
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
D+V+Q + FNQ N + +D +++K DT+ D VG ++MV + P++FVG G
Sbjct: 489 DSVEQATNFNQAFG------NKRSLDFFIVSKVDTVGDLVGTMINMVMATKVPILFVGTG 542
Query: 570 QSYTDLKKLNVKSIVKTLLK 589
Q+YTD+K+L+VK +V+ L+K
Sbjct: 543 QTYTDIKRLSVKQVVEMLMK 562
>gi|448123996|ref|XP_004204808.1| Piso0_000087 [Millerozyma farinosa CBS 7064]
gi|358249441|emb|CCE72507.1| Piso0_000087 [Millerozyma farinosa CBS 7064]
Length = 548
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 224/417 (53%), Gaps = 67/417 (16%)
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVW------DDSPPESKLDFT--DPAGGNGSNIEVE- 276
KK+ +K P KK K R W DD+ S+LDF+ + NG N +++
Sbjct: 146 KKSSVASTKSKTPKTGKK---KMRRWNNGEIVDDNADASELDFSKDEELRANGGNRDIDF 202
Query: 277 ---AADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKA 333
A + ++ EE+ ++ + +ED E ++ + G+F+ + G+
Sbjct: 203 DQNAFERENDLVLVEELKNALDDEDEDSEDESNSNGGTFRRGFFNKVMSYFGGEV----- 257
Query: 334 DLEPALKALKDRLMTKNVAA----------------------------MEEALVRILTPR 365
DL K D+L+TKN++A ++ L +IL+P
Sbjct: 258 DLNTLSKQFHDQLITKNISAGTSKTILDRIQSQFGKKKTVSLEAFKSALQVELTKILSPN 317
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
S D+L ++ + E+ KPYV+ VGVNGVGKSTNLAK+A+WLLQ+ ++V++ ACDTFRSG
Sbjct: 318 VSTDLLFEIKSKSEKGKPYVISVVGVNGVGKSTNLAKLAFWLLQNNLNVLICACDTFRSG 377
Query: 426 AVEQLRTHARRL-----------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVD 472
AVEQL+ H L ++ IFEKGY +V A+ AI+ A G +VVL+D
Sbjct: 378 AVEQLKIHVNNLSALNKSSASTSKINIFEKGYGGGNHVVATARSAIEHAENEGYNVVLID 437
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR N LM L K NPD ++ VGEALVG+D+V+Q FN +
Sbjct: 438 TAGRTHSNAKLMAPLKKFGDAANPDKIIMVGEALVGSDSVEQAINFNNAFG------TKR 491
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+D +++K DT+ D VG ++MV + P++F+G GQ+YTD+K+L+VK++V LLK
Sbjct: 492 NLDFFIISKVDTVGDMVGTMINMVMATNVPILFIGTGQTYTDIKRLSVKTVVDMLLK 548
>gi|452847004|gb|EME48936.1| hypothetical protein DOTSEDRAFT_67849 [Dothistroma septosporum
NZE10]
Length = 685
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 186/327 (56%), Gaps = 51/327 (15%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------- 352
T + +F ++ G L K DL+ L +++ L+ KN+A
Sbjct: 359 TSKIAGLFANVVGGKQLTKQDLQQPLLQMQNALLEKNIAREAAERLCQSVEADLLNQTTA 418
Query: 353 -----------AMEEALVRILTPRRSIDILRDVHAAKE--QRKPYVVVFVGVNGVGKSTN 399
M +AL R+LTP S+D+LR++++ +PYV+ VGVNGVGKSTN
Sbjct: 419 SFTSIEKTIREGMSKALTRMLTPTSSLDLLRNINSTTSGSNPRPYVISIVGVNGVGKSTN 478
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------QVPIFEKGYEKD 449
L+K+AY+LLQ+K V++ A DTFRSGAVEQLR H R L V +FEKGY KD
Sbjct: 479 LSKIAYFLLQNKFRVLVVAADTFRSGAVEQLRVHVRNLSELSRRETVGHVELFEKGYGKD 538
Query: 450 PAIVAKEAIQEATRNGS-----DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
A VA++A+ AT +G DVVL+DTAGR ++ LM +L+K L NPD + VGE
Sbjct: 539 AAEVARQAVTYATNSGKGDMLYDVVLIDTAGRRHNDTRLMSSLTKFGQLANPDKIFMVGE 598
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLI--DGILLTKFDTIDDKVGAALSMVYVSGAP 562
ALVG D+V Q F ++ D + + DG +++K DT+ D VG +SMV+ +G P
Sbjct: 599 ALVGTDSVAQARNFAKEFVDQKGAMRNGGVGMDGFIISKCDTVGDMVGTLVSMVHATGIP 658
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLLK 589
V+F+G GQ Y DL+ LNV V L+K
Sbjct: 659 VVFLGVGQHYGDLRGLNVDWAVSKLMK 685
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW ++ + + +++LI +EER A+ + A
Sbjct: 1 MLDAFEIVTTSGIVLW--RKQYAPVSSNVVNSLINDVFIEERQKPAAAVEGATTAPAYRK 58
Query: 57 --YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLA-----MMKQSFSEIYDPKRT--DYS 107
Y L++T ++GL+FVAVYQ +LHL +VDDLL +KQ +E+ P+ T +
Sbjct: 59 DKYILRYTTAKDVGLIFVAVYQSLLHLSWVDDLLTAVRGMFIKQYGNELKKPETTKVEAR 118
Query: 108 DFDEMFRQLRKEAEARAEELKKSKQ 132
FD+ F L ++ + + ++S+
Sbjct: 119 GFDQTFDALLRKLDTGSTRRRQSEH 143
>gi|190346780|gb|EDK38947.2| hypothetical protein PGUG_03045 [Meyerozyma guilliermondii ATCC
6260]
Length = 529
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 216/404 (53%), Gaps = 60/404 (14%)
Query: 233 SKGSNPDPKKKITKKN-RVWD-----DSPPESKLDFTDPAGGNGSNIEVEAADHGESMMD 286
S S P + TKK R WD + LD+++ G+ S I ++ G++
Sbjct: 139 SGTSTPKKVQSQTKKTMRKWDGNQMVEVNANEVLDYSEGKAGDDSAINTDSLVSGDAFSQ 198
Query: 287 KEE-VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
+++ V ++ DE+V +KK+G+F + G +LD+ K D+
Sbjct: 199 QDDLVLVNELNDILDEDVPSDEV--SKKSGFFGKISSYFGGPIDLDEVS-----KTFTDQ 251
Query: 346 LMTKNVA---------------------------AMEEALVRILTPRRSIDILRDV--HA 376
++KN+A A+ L +ILTP S D+L DV ++
Sbjct: 252 FISKNIAPATAKTITDKLNHELKGKKVTLKDYKRALTVELTKILTPNVSTDLLYDVKRNS 311
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
+ +PYV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACDTFRSGAVEQL+ H
Sbjct: 312 STSNSRPYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSGAVEQLKVHVNN 371
Query: 437 L---------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
L ++ IFEKGY +V AK AI+ A G D+VL+DTAGR N LM
Sbjct: 372 LKRLNTTTNTKIDIFEKGYGGGDHVVATAKSAIEFAGAEGFDIVLIDTAGRTHSNAKLMA 431
Query: 486 ALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTI 545
L K NP+ ++ VGEALVG D+V+Q FN N + +D +++K DT+
Sbjct: 432 PLKKFGDAANPNKIIMVGEALVGTDSVEQAVNFNNAFG------NRRSLDFFIISKVDTV 485
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D VG+ ++MV + P++FVG GQ YTD+K+L+VKS+V L++
Sbjct: 486 GDLVGSMINMVMATKVPILFVGTGQVYTDIKRLSVKSVVDALMR 529
>gi|68468044|ref|XP_721861.1| hypothetical protein CaO19.3952 [Candida albicans SC5314]
gi|46443803|gb|EAL03082.1| hypothetical protein CaO19.3952 [Candida albicans SC5314]
Length = 535
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 192/340 (56%), Gaps = 59/340 (17%)
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
SD E E+ +E + +G+FS + + G N+D+ K +++L+TKN+
Sbjct: 212 SDDEGEQVDETN-----GSVGSGFFSKISSYLGGTINVDEVS-----KKFREQLITKNIT 261
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDV-HAAKEQRKP 383
A+ + L +ILTP S D+L D+ A+ +P
Sbjct: 262 PGIATTIIDKIKTKLSANKKVTMAVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRP 321
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------ 437
YV+ VGVNGVGKSTNLAK+A+W LQ+ ++V++ ACDTFRSGAVEQL+ H L
Sbjct: 322 YVISVVGVNGVGKSTNLAKLAFWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLNRLNEA 381
Query: 438 ------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
++ IFEKGY +V AK+A+Q A N D+VL+DTAGR N LM L K
Sbjct: 382 STNTKSRIDIFEKGYGSGDHVVQTAKQAVQYAEENKFDIVLIDTAGRTHSNAKLMAPLKK 441
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
NP+ ++ VGEALVG D+V+Q + FN+ N + +D +++K DT+ D V
Sbjct: 442 FGDAANPNKIIMVGEALVGTDSVEQATNFNKAFG------NKRTLDFFIISKVDTVGDLV 495
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G ++MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 496 GTMINMVMATNVPILFVGTGQTYTDIKRLSVKQVVEMLMK 535
>gi|238882842|gb|EEQ46480.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 535
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 192/340 (56%), Gaps = 59/340 (17%)
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
SD E E+ +E + +G+FS + + G N+D+ K +++L+TKN+
Sbjct: 212 SDDEGEQVDETN-----GSVGSGFFSKISSYLGGTINVDEVS-----KKFREQLITKNIT 261
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDV-HAAKEQRKP 383
A+ + L +ILTP S D+L D+ A+ +P
Sbjct: 262 PGIATTIIDKIKTKLSANKKVTMAVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRP 321
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------ 437
YV+ VGVNGVGKSTNLAK+A+W LQ+ ++V++ ACDTFRSGAVEQL+ H L
Sbjct: 322 YVISVVGVNGVGKSTNLAKLAFWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLNRLNEA 381
Query: 438 ------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
++ IFEKGY +V AK+A+Q A N D+VL+DTAGR N LM L K
Sbjct: 382 STNTKSRIGIFEKGYGSGDHVVQTAKQAVQYAEENKFDIVLIDTAGRTHSNAKLMAPLKK 441
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
NP+ ++ VGEALVG D+V+Q + FN+ N + +D +++K DT+ D V
Sbjct: 442 FGDAANPNKIIMVGEALVGTDSVEQATNFNKAFG------NKRTLDFFIISKVDTVGDLV 495
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G ++MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 496 GTMINMVIATNVPILFVGTGQTYTDIKRLSVKQVVEMLMK 535
>gi|378730951|gb|EHY57410.1| signal recognition particle receptor [Exophiala dermatitidis
NIH/UT8656]
Length = 655
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 184/324 (56%), Gaps = 54/324 (16%)
Query: 313 KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------- 352
K G S F++I G L K DLE LK++++ L+ KNVA
Sbjct: 337 KLGAISGYFRNIVGGKTLTKQDLEKPLKSMEEHLINKNVARDAAVRICQVVEEEMVGKRT 396
Query: 353 ------------AMEEALVRILTPRRSIDILRDVH------AAKEQRKPYVVVFVGVNGV 394
A+E AL RILTP+ S+D+L+ + K + +P+V+ +GVNGV
Sbjct: 397 GAFESIDTALRPALETALKRILTPKSSLDLLQQIETITKPSGVKAKPRPFVITILGVNGV 456
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEK 444
GKSTNL+K+ Y+LLQ+ V++AA DTFRSGAVEQL H R L+ V I+E+
Sbjct: 457 GKSTNLSKLCYFLLQNNYRVLIAAGDTFRSGAVEQLNVHVRNLKELTARENLGAVDIYER 516
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
GY KD A VAK+A+ A+ N VVL+DTAGR N LM +L KL+ L PDL+L V E
Sbjct: 517 GYGKDAANVAKDAVAFASANDYQVVLIDTAGRAHTNTQLMASLEKLVDLAKPDLILQVAE 576
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVGND+V Q F + L + +DG +++K DT+ +G +S+V+ + PV
Sbjct: 577 ALVGNDSVGQAQNFTKALG------KNRKLDGFIVSKIDTVGSGIGTMISLVHATSVPVQ 630
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
F+G GQ Y DL++L+V V L+
Sbjct: 631 FIGVGQHYGDLRQLSVPWAVNMLM 654
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 23/133 (17%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEER-------SGLASFNYDSA 53
ML+ I T G++LW+ + + + +++LI +EE+ SG ++ +D
Sbjct: 1 MLDAFEILTTSGVVLWSRSS--SKVGATAVNSLINDVFIEEKVRLSSTTSGHPAYKHDK- 57
Query: 54 GAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY--DPKRTDYS---- 107
YTLK+ +LGL+FVAVYQ +LHL +VD LL ++ F E+Y + DY+
Sbjct: 58 ---YTLKYALVKDLGLMFVAVYQSLLHLTWVDKLLDDVRTIFVEVYRGQLEELDYAVLKY 114
Query: 108 ----DFDEMFRQL 116
FDE R+L
Sbjct: 115 PFDKYFDEELRRL 127
>gi|344300773|gb|EGW31094.1| hypothetical protein SPAPADRAFT_56999 [Spathaspora passalidarum
NRRL Y-27907]
Length = 548
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 189/340 (55%), Gaps = 59/340 (17%)
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
++S+ EE EE +K+G+FS + G N+D+ K D+L++KN+A
Sbjct: 225 NESDDEEQEE-----GAGTQKSGFFSKISSYFGGAINVDEVS-----KKFHDQLISKNIA 274
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDVHAAKEQ-RKP 383
+ + L +ILTP S D+L D+ K + +P
Sbjct: 275 PQTSKSIIEKIKLKLQNKSNITMAVYQQTLTDELTKILTPNVSTDLLYDIKKQKTRGTRP 334
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----- 438
YV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACDTFRSGAVEQL+ H LQ
Sbjct: 335 YVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLQKLNDM 394
Query: 439 -------VPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
+ +FEKGY +V AK AIQ AT D+VL+DTAGR N LM L K
Sbjct: 395 STTTSSKIELFEKGYGAGDHVVQTAKSAIQFATDEKFDIVLIDTAGRTHSNAKLMAPLKK 454
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
+PD ++ VGEALVG D+V+Q FN N + +D +++K DT+ D V
Sbjct: 455 FGDAADPDKIIMVGEALVGTDSVEQAINFNNAFG------NKRNLDFFIISKVDTVGDLV 508
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G ++MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 509 GTMINMVMATKVPILFVGTGQTYTDIKRLSVKQVVEMLMK 548
>gi|146418701|ref|XP_001485316.1| hypothetical protein PGUG_03045 [Meyerozyma guilliermondii ATCC
6260]
Length = 529
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 216/404 (53%), Gaps = 60/404 (14%)
Query: 233 SKGSNPDPKKKITKKN-RVWD-----DSPPESKLDFTDPAGGNGSNIEVEAADHGESMMD 286
S S P + TKK R WD + LD+++ G+ S I ++ G++
Sbjct: 139 SGTSTPKKVQSQTKKTMRKWDGNQMVEVNANEVLDYSEGKAGDDSAINTDSLVSGDAFSQ 198
Query: 287 KEE-VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
+++ V ++ DE+V +KK+G+F + G +LD+ K D+
Sbjct: 199 QDDLVLVNELNDILDEDVPSDEV--SKKSGFFGKISSYFGGPIDLDEVS-----KTFTDQ 251
Query: 346 LMTKNVA---------------------------AMEEALVRILTPRRSIDILRDV--HA 376
++KN+A A+ L +ILTP S D+L DV ++
Sbjct: 252 FISKNIAPATAKTITDKLNHELKGKKVTLKDYKRALTVELTKILTPNVSTDLLYDVKRNS 311
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
+ +PYV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACDTFRSGAVEQL+ H
Sbjct: 312 STSNSRPYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSGAVEQLKVHVNN 371
Query: 437 L---------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
L ++ IFEKGY +V AK AI+ A G D+VL+DTAGR N LM
Sbjct: 372 LKRLNTTTNTKIDIFEKGYGGGDHVVATAKLAIEFAGAEGFDIVLIDTAGRTHSNAKLMA 431
Query: 486 ALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTI 545
L K NP+ ++ VGEALVG D+V+Q FN N + +D +++K DT+
Sbjct: 432 PLKKFGDAANPNKIIMVGEALVGTDSVEQAVNFNNAFG------NRRSLDFFIISKVDTV 485
Query: 546 DDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D VG+ ++MV + P++FVG GQ YTD+K+L+VKS+V L++
Sbjct: 486 GDLVGSMINMVMATKVPILFVGTGQVYTDIKRLSVKSVVDALMR 529
>gi|260948082|ref|XP_002618338.1| hypothetical protein CLUG_01797 [Clavispora lusitaniae ATCC 42720]
gi|238848210|gb|EEQ37674.1| hypothetical protein CLUG_01797 [Clavispora lusitaniae ATCC 42720]
Length = 529
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 225/426 (52%), Gaps = 76/426 (17%)
Query: 226 KKTDTVVS-----KGSNPDPKKKIT----KKNRVWDDSP------PESKLDFTDPAGGNG 270
KK DTV + +NP KKK K R W + E+ LD+++ G +
Sbjct: 118 KKEDTVPQEQPKMQETNPSNKKKTQNPPKKAMRKWVNGELVEVGNNEAPLDYSELHGEDS 177
Query: 271 SNIEVEAADHGESMMDKEEVFSSDSESEE------DEEVGKHNKPDAKKTGWFSSMFQSI 324
++ E+E +S KE E E ++ + +KP K+G+ S +
Sbjct: 178 ADREMEEVSIDQSAFSKENDLVLVRELNEILGEDEEDSEEEESKP---KSGFLSKVTSYF 234
Query: 325 AGKANLDKADLEPALKALKDRLMTKNVA---------------------------AMEEA 357
A +D+ K D+L++KN+A A+ E
Sbjct: 235 GSTAPIDEVS-----KKFNDQLISKNIAPPTAKAITEKIKTRLGSKTVTVNAFKQALTEE 289
Query: 358 LVRILTPRRSIDILRDVH-AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMM 416
L +ILTP S D+L ++ ++ +++PYV+ VGVNGVGKSTNLAK+AYWLLQ+ ++V++
Sbjct: 290 LTKILTPNVSTDLLYEIKKSSAAKKRPYVISVVGVNGVGKSTNLAKLAYWLLQNNLNVLI 349
Query: 417 AACDTFRSGAVEQLRTHARRL-----------QVPIFEKGYEKDPAIV--AKEAIQEATR 463
ACDTFRSGAVEQL+ H + L ++ +FEKGY +V AK AIQ AT
Sbjct: 350 CACDTFRSGAVEQLKVHVKNLKRLNASNDTECKIDLFEKGYGGGDHVVKTAKSAIQHATT 409
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
G D+VL+DTAGR N LM L K +PD ++ VGEALVG D+V+Q FN
Sbjct: 410 EGYDIVLIDTAGRTHSNAKLMAPLKKFGDAADPDKIIMVGEALVGTDSVEQAINFNNAFG 469
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
N + +D +++K DT+ D VGA ++MV + P++FVG GQ+YTD+K+L+VK +
Sbjct: 470 ------NKRNLDFFIISKVDTVGDLVGAMINMVMATNVPILFVGTGQTYTDIKRLSVKRV 523
Query: 584 VKTLLK 589
V L K
Sbjct: 524 VDMLTK 529
>gi|294659968|ref|XP_462420.2| DEHA2G20196p [Debaryomyces hansenii CBS767]
gi|199434369|emb|CAG90930.2| DEHA2G20196p [Debaryomyces hansenii CBS767]
Length = 545
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 210/421 (49%), Gaps = 77/421 (18%)
Query: 230 TVVSKGSNPDPKKK----ITKKNRVWD------DSPPESKLDFTDPAGGNGSNIEVEAAD 279
TV S P K+ TKK R WD +S LDF++ + S+ V
Sbjct: 139 TVSSNSGTSTPNKQKTGASTKKMRKWDGDQMVENSGDSQVLDFSNKNESSNSDNRV---- 194
Query: 280 HGESMMDKEEVFSSDSESEEDEEVG-----------KHNKPDAKKTGWFSSMFQSIAGKA 328
+ + + FS D++ +E+ + + K G+F +
Sbjct: 195 YNDQLKVDPTAFSKDNDLVLVQELNDILADDDDDEEEEESANTKSGGFFGKVTSYFGSSI 254
Query: 329 NLDKADLEPALKALKDRLMTKNVA----------------------------AMEEALVR 360
N+D+ K D+L+TKN+A M E L +
Sbjct: 255 NIDEVS-----KKFLDQLITKNIAPPTAKIILDKIKNKLGNKQGVTIAMYKQTMVEELTK 309
Query: 361 ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACD 420
ILTP S D+L ++ KPYV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACD
Sbjct: 310 ILTPNVSTDLLYEIKDRSSSGKPYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACD 369
Query: 421 TFRSGAVEQLRTHARRLQ-----------VPIFEKGYEKDPAIV--AKEAIQEATRNGSD 467
TFRSGAVEQL+ H LQ + IFEKGY +V AK AIQ A+ D
Sbjct: 370 TFRSGAVEQLKVHVNNLQKLNNSSSSESKIDIFEKGYGGGDHVVATAKSAIQHASTEHYD 429
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
+VL+DTAGR N LM L K NPD ++ VGEALVG D+V+Q FN
Sbjct: 430 IVLIDTAGRTHSNAKLMTPLKKFGDAANPDKIIMVGEALVGTDSVEQAINFNNAFG---- 485
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
N + +D +++K DT+ D VG ++MV + P++FVG GQ+YTD+K+L+VK++V L
Sbjct: 486 --NRRNLDFFIISKIDTVGDLVGTMINMVMATKVPILFVGTGQTYTDIKRLSVKTVVDML 543
Query: 588 L 588
+
Sbjct: 544 M 544
>gi|303390938|ref|XP_003073699.1| signal recognition particle GTPase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302847|gb|ADM12339.1| signal recognition particle GTPase [Encephalitozoon intestinalis
ATCC 50506]
Length = 425
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 161/227 (70%), Gaps = 8/227 (3%)
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
S+D + + ++ + + + FVGVNGVGKST+LAK+ YWLL++K+ V +AACDTFR+GA
Sbjct: 200 SVDHEKMLDGIRKHKGVFSICFVGVNGVGKSTSLAKICYWLLKNKLKVYIAACDTFRAGA 259
Query: 427 VEQLRTHARRLQ-----VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
+EQL+TH R Q V ++KGY KD A VA+ AIQEA G DV+L+DTAGRM + +
Sbjct: 260 IEQLKTHVERFQLGGYSVGFYQKGYGKDDASVARCAIQEAQHEGYDVILIDTAGRMHNKK 319
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTK 541
LM +L+KL+ +N PD +++VGEALVG+D+++ + +FN+ + D N ID ILLTK
Sbjct: 320 NLMMSLTKLMKINKPDHIIYVGEALVGSDSLEHIKEFNRAIKDADQLRN---IDSILLTK 376
Query: 542 FDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DT+D+K+G L+M + S AP++F+G GQ+ +DL + + IV +L+
Sbjct: 377 VDTVDNKIGQILNMAFSSNAPILFLGVGQTNSDLSNIGSEDIVNSLM 423
>gi|255723319|ref|XP_002546593.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130724|gb|EER30287.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 539
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 173/297 (58%), Gaps = 47/297 (15%)
Query: 334 DLEPALKALKDRLMTKNVA----------------------------AMEEALVRILTPR 365
DL K D+LM+KN+A A+ + L +ILTP
Sbjct: 249 DLNEVSKQFNDQLMSKNIAPGTSKQIIEKIKNKLSGNKKVTMSMYKQALTDELTKILTPN 308
Query: 366 RSIDILRDV-HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRS 424
S D+L D+ A+ +PYV+ VGVNGVGKSTNLAK+AYWLLQ+ +V++ ACDTFRS
Sbjct: 309 VSTDLLHDIKRNAETNTRPYVISVVGVNGVGKSTNLAKLAYWLLQNNFNVLICACDTFRS 368
Query: 425 GAVEQLRTHARRL----------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVD 472
GAVEQL+ H L ++ +FEKGY +V AK+AIQ AT + D+VL+D
Sbjct: 369 GAVEQLKVHVNNLNRLNENSENSKIDLFEKGYGSGDHVVQTAKQAIQYATDHKFDIVLID 428
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR N LM L K NP+ ++ VGEALVG D+V+Q FN N +
Sbjct: 429 TAGRTHSNAKLMAPLKKFGDAANPNKIIMVGEALVGTDSVEQAINFNNAFG------NKR 482
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+D +++K DT+ D VG ++MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 483 SLDFFIISKVDTVGDLVGTMINMVMATKVPILFVGTGQTYTDIKRLSVKQVVEMLMK 539
>gi|241956007|ref|XP_002420724.1| signal recognition particle (SRP) receptor subunit alpha, putative
[Candida dubliniensis CD36]
gi|223644066|emb|CAX41809.1| signal recognition particle (SRP) receptor subunit alpha, putative
[Candida dubliniensis CD36]
Length = 535
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 191/340 (56%), Gaps = 59/340 (17%)
Query: 293 SDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
SD ESE ++ + G+FS + + G N+D+ K +++L++KN+
Sbjct: 212 SDDESESPDQTS-----GSVGNGFFSKIGSYLGGTINVDEVS-----KKFREQLISKNIT 261
Query: 353 ----------------------------AMEEALVRILTPRRSIDILRDV-HAAKEQRKP 383
A+ + L +ILTP S D+L D+ A+ +P
Sbjct: 262 PGTATTIIDKIKTKLSTNKKVTMAVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRP 321
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL------ 437
YV+ VGVNGVGKSTNLAK+A+W LQ+ ++V++ ACDTFRSGAVEQL+ H L
Sbjct: 322 YVISVVGVNGVGKSTNLAKLAFWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLNRLNEA 381
Query: 438 ------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
++ IFEKGY +V AK+AIQ A N D+VL+DTAGR N LM L K
Sbjct: 382 STNTKSRIDIFEKGYGSGDHVVQTAKQAIQYAGENNFDIVLIDTAGRTHSNAKLMAPLKK 441
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
+P+ ++ VGEALVG D+V+Q + FN+ N + +D +++K DT+ D V
Sbjct: 442 FGDAASPNKIIMVGEALVGTDSVEQATNFNKAFG------NKRTLDFFIISKVDTVGDLV 495
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G ++MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 496 GTMINMVMATNVPILFVGTGQTYTDIKRLSVKQVVEMLMK 535
>gi|354547308|emb|CCE44042.1| hypothetical protein CPAR2_502670 [Candida parapsilosis]
Length = 533
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 218/412 (52%), Gaps = 68/412 (16%)
Query: 233 SKGSNPDPKKKI-----TKKNRVWDDSPPESKLDFTDPAGGNGSNIEV--EAADHGESMM 285
S GS P K+ +KK R WD+S +D++D + SN + E+ E +
Sbjct: 135 SNGSKPQSKQPAQKQVSSKKMRKWDNSG--EMVDYSDNQVLDYSNSQGQDESIRPKEMKV 192
Query: 286 DKEEVFSSDSESEEDEEVG-------------KHNKPDAKKTGWFSSMFQSIAGKANLDK 332
+ E F+ +SE E+ NKP TG+F + G N+D+
Sbjct: 193 NNEAAFTKESELVLVNELNDILNESDEEEEDETQNKP----TGFFGKIGSYFGGSINVDE 248
Query: 333 A-----------DLEPAL-KALKDRLMTK------NVAAMEEALV----RILTPRRSIDI 370
++ P+ K + D+L T+ N+A ++ LV +ILTP S D+
Sbjct: 249 VSKKFNEQLISKNIAPSTAKTIIDKLKTRLAGKKVNMATYKQTLVDELTKILTPNVSTDL 308
Query: 371 LRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 430
L ++ R PYV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACDTFRSGAVEQL
Sbjct: 309 LYEIKRNDTGR-PYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSGAVEQL 367
Query: 431 RTHARRL-----------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRM 477
+ H L ++ +FEKGY +V AK AIQ AT DVVL+DTAGR
Sbjct: 368 KVHVNNLDRLNSELSNKSKIALFEKGYGSGDHVVQTAKSAIQYATEERFDVVLIDTAGRT 427
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
N LM L K NP+ ++ VGEALVG D+V+Q FN N + +D
Sbjct: 428 HSNAKLMAPLKKFGDAANPNKIIMVGEALVGTDSVEQAINFNNAFG------NRRNLDFF 481
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+++K DT+ D VG ++MV + P++FVG GQ+YTD+K+L+V+ +V L K
Sbjct: 482 IISKVDTVGDLVGTMINMVMATKVPILFVGTGQTYTDIKRLSVRQVVDMLTK 533
>gi|340975863|gb|EGS22978.1| hypothetical protein CTHT_0014570 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2963
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 301/646 (46%), Gaps = 123/646 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLA-SFNYDSAGA---- 55
ML+ I T G++LW+ + S ++ I +EE+S +A S N SA +
Sbjct: 1 MLDAFEILTTSGVVLWS--RTYAPVNPSVVNDFITDVFIEEKSAVAGSKNGGSAASNPPY 58
Query: 56 ---AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYD-----PKRT--D 105
++L+WTF ELG++FVAVY+ +LHL +VD L+ ++ F +Y P T +
Sbjct: 59 KHDQHSLRWTFVKELGIIFVAVYRSLLHLPWVDKLVDNIRAIFVSLYSEQFKRPNTTIIE 118
Query: 106 YSDFDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAN 165
+FD+ F Q +E E + +V + ++ ++ F A
Sbjct: 119 CINFDKYFDQQLQELE------QTGSRVDARVPKIEAHSADEEEQPFVPSPAGKSEQKAP 172
Query: 166 DDGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGG 225
+ S N HS V G + + + +KL+N
Sbjct: 173 IESISQN---------HSRPTTSSTSHLVVPRPGPGGKLSR---------RARKLQNSNS 214
Query: 226 KKTDTVVSKGSNPDPKKKITKKNRVWD-------DSPPESKLDFTDPA---------GGN 269
+ S + K+ K+ R WD D + +LD++ PA G
Sbjct: 215 APASSGDEAPSRKGKQGKLVKRGRKWDADGLAIEDDGSDVQLDYSAPALTSDSEAEASGR 274
Query: 270 GSNIE-VEAADHGESMMDK-------EEVFS--SDSESEEDEEVGKHNKPD--AKKTGWF 317
+IE V+A+ G K +EV S +D+E++++ E
Sbjct: 275 AISIERVDASTMGSRTKGKFVLKDLGDEVHSILADAEAKKNAETSSEASSGIVGSSLNAI 334
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------- 352
+F++ G L K DLE A+K +++ L+ KNVA
Sbjct: 335 GGLFRNFVGGKVLTKQDLEKAMKGMEEHLLKKNVAREAAVRLCESVEKELIGVKTGSFES 394
Query: 353 -------AMEEALVRILTPRRSIDILRDVHAAK-------EQRKPYVVVFVGVNGVGKST 398
AME +L ++LTP SID+LR++ + QR+PYV+ VGVNGVGKST
Sbjct: 395 ISRTVQKAMEASLTKMLTPTSSIDLLREIDSVTSPPPTSGRQRRPYVISIVGVNGVGKST 454
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKD 449
NL+K+ ++LLQ++ V++AA DTFRSGAVEQL H R L +V +++KGY KD
Sbjct: 455 NLSKICFFLLQNQYKVLIAAADTFRSGAVEQLAVHVRNLKELTAREGGRVELYQKGYGKD 514
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A VAK+A+ A + G DVVL+DTAGR +++ LM +L K L PD +L VGEALVG
Sbjct: 515 AAAVAKDAVVFAAQEGFDVVLIDTAGRRHNDQRLMSSLEKFTKLAKPDKILMVGEALVGT 574
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
D+V Q FN S +DG +++K DT+ D VG +S+
Sbjct: 575 DSVAQARNFNAAFGAGRS------LDGFIISKCDTVGDMVGTLVSI 614
>gi|429961902|gb|ELA41446.1| hypothetical protein VICG_01551 [Vittaforma corneae ATCC 50505]
Length = 418
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 150/216 (69%), Gaps = 8/216 (3%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K+ + + FVGVNGVGKST LAK+AYWL+Q+ + V +AACDTFR+GA+EQL+ H R
Sbjct: 205 KKHTGVFSICFVGVNGVGKSTTLAKIAYWLIQNGLRVYIAACDTFRAGAIEQLKVHVERF 264
Query: 438 Q-----VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+ V FE GY KD A VAK AI +A DV+L+DTAGRM + E LM +L+KLI
Sbjct: 265 KLGGHDVGFFESGYAKDDASVAKHAIMKANSENYDVILIDTAGRMHNKEALMVSLTKLIK 324
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+NPD ++FVGEAL+G D++ + +FN+++++ SS + ID I+LTK DT+DDK+G
Sbjct: 325 TSNPDHIIFVGEALIGGDSLHHIKEFNKRISEGSSG---RRIDSIILTKIDTVDDKIGQV 381
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
L+ + + +P+MF+G GQS TDL + K+I LL
Sbjct: 382 LNFTFTANSPIMFLGTGQSNTDLTIMEGKAISDILL 417
>gi|269860608|ref|XP_002650024.1| signal recognition particle receptor alpha subunit [Enterocytozoon
bieneusi H348]
gi|220066575|gb|EED44052.1| signal recognition particle receptor alpha subunit [Enterocytozoon
bieneusi H348]
Length = 405
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 165/237 (69%), Gaps = 8/237 (3%)
Query: 357 ALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMM 416
L ++L ++++ + ++ KP+V FVGVNGVGKST++AK+ WLL+HK+SV +
Sbjct: 171 VLSKLLPSLNHVNLINKIKETNKEGKPFVFCFVGVNGVGKSTSVAKMTKWLLEHKLSVFI 230
Query: 417 AACDTFRSGAVEQLRTHARRL-----QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
AACDTFR+GA+EQL+T+ + V ++ GY KD AIVAK AI +A N DVVL+
Sbjct: 231 AACDTFRAGAIEQLKTYVDQFITSGYNVGFYKSGYNKDDAIVAKTAIAKAHENNYDVVLI 290
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRM +N LM +LSK+I +N PD +++VGEAL GND+++ + +FN+ +++ S
Sbjct: 291 DTAGRMHNNGMLMSSLSKIIRMNTPDHIVYVGEALTGNDSLNFVEEFNKYISNAQSG--- 347
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
++ID I+LTK DT+D K+G ++ + + AP++F+GCGQ+ +DL +++ I+ LL
Sbjct: 348 RIIDSIILTKIDTVDKKLGQIFNLTFKAQAPILFLGCGQTNSDLIEVDPDKILDLLL 404
>gi|349805335|gb|AEQ18140.1| putative signal recognition particle receptor subunit alpha
[Hymenochirus curtipes]
Length = 374
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 152/243 (62%), Gaps = 49/243 (20%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA--------------------- 353
G M + + G +L D+EP L+ +KD L+ KNVAA
Sbjct: 138 GGMFGMLKGLVGAKSLSMEDMEPVLEKMKDHLIAKNVAADISLQLCESVAKNLEKVMGTF 197
Query: 354 ---------MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
++E+LV+IL P+R +DILRDV A PYV+ F GVNGVGKSTNLAK++
Sbjct: 198 STVTSSVKALQESLVQILQPKRRVDILRDVMEA-----PYVITFCGVNGVGKSTNLAKIS 252
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPA 451
+WL+++ SV++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A
Sbjct: 253 FWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNSLHPPEEHKGRAMVQLYEKGYGKDAA 312
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+A EA+ A DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVG +LVGN+A
Sbjct: 313 GIAMEAVSYARNQVFDVVLVDTAGRMQDNAPLMTALAKLIAVNVPDLVLFVG-SLVGNEA 371
Query: 512 VDQ 514
VDQ
Sbjct: 372 VDQ 374
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 38 LLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSE 97
+L+ER G +N+DS TLK+ N+ LVFV YQ+IL L YVD L+ + + F +
Sbjct: 1 ILQERGGNNCYNHDS----LTLKYKLDNQFELVFVVGYQKILTLTYVDKLIDDVHKVFRD 56
Query: 98 IY 99
Y
Sbjct: 57 KY 58
>gi|300708288|ref|XP_002996326.1| hypothetical protein NCER_100586 [Nosema ceranae BRL01]
gi|239605619|gb|EEQ82655.1| hypothetical protein NCER_100586 [Nosema ceranae BRL01]
Length = 415
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 156/224 (69%), Gaps = 11/224 (4%)
Query: 370 ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
+L+D+ K +++ + + FVGVNGVGKST+LAK+ YWLL++ + V +AACDTFR+GAVEQ
Sbjct: 197 LLKDI---KNKKEAFSICFVGVNGVGKSTSLAKICYWLLENDLKVYIAACDTFRAGAVEQ 253
Query: 430 LRTHARRLQ-----VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM 484
L+ H R + V +EKGY KD A VA+ AIQ AT DV+L+DTAGRM + LM
Sbjct: 254 LKVHVDRFRQSGYSVGFYEKGYGKDDASVARTAIQIATSEKYDVILIDTAGRMHNKLSLM 313
Query: 485 RALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDT 544
+LSKLI +N PD +++VGEALVG D++D + +FN+ +S + ID +LLTK DT
Sbjct: 314 ESLSKLIKINEPDFIVYVGEALVGVDSLDHIKEFNKF---ISKGSIHRKIDSLLLTKVDT 370
Query: 545 IDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DDK+G L+M + S APV F+G GQ+ +DL ++ IV +LL
Sbjct: 371 VDDKIGQILNMTFTSHAPVFFLGTGQANSDLSEITSGDIVNSLL 414
>gi|159118036|ref|XP_001709237.1| Signal recognition particle receptor [Giardia lamblia ATCC 50803]
gi|157437353|gb|EDO81563.1| Signal recognition particle receptor [Giardia lamblia ATCC 50803]
Length = 571
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 178/625 (28%), Positives = 295/625 (47%), Gaps = 103/625 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M +QL GL++W + + PID LI +E+R+ + + + Y L
Sbjct: 1 MFDQLAFVHTSGLVIWQSTKQPDTY---PIDHLITLVYVEKRAIPSPYVLE----GYALH 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
+ + EL + +A+ ++ L + +D+L M F + +++ R L E
Sbjct: 54 YLYIKELSMFAIAIIKQGLTVSGAEDILLAMTHLFIK----------EYEASIRVLPVE- 102
Query: 121 EARAEELKKS--KQVTKPMNNLKKQGGQLQKGGFE-RGSNRSGGGSANDDGDSDNMRGRK 177
A+E +S Q + +L G L + G + +N+ D D++ G K
Sbjct: 103 --YAKETYQSFDAQYDGNLKSLISTGKTLHERGLSVQQTNQESTAKDTAQLDPDSI-GDK 159
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSN 237
+ + ++ ++ +E+ + + I + + LR K+ + K SN
Sbjct: 160 VVDLSADAASINLEDVK------------AKIKQMAFERQESLR--ASKRLSGLPDKKSN 205
Query: 238 -PDPKKKITKKNRVWDDSPPESKLDFTDPAGGN-GSNIEVEAADHGESMMDKEEVFSSDS 295
P+ K + +R D+ SK++ T + N + EV A S+ D + + + S
Sbjct: 206 ETTPQAK--RNDRQVDEFLQYSKVETTKSSAANIIAEPEVSQASKPSSISDAKHITFTPS 263
Query: 296 ESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---- 351
++F K L D+E L +L+ L+ +NV
Sbjct: 264 R---------------------EAVFGLFNNKKELTSNDVEKLLSSLRQALINQNVASDV 302
Query: 352 ---------AAMEEALVRILTPRRSIDI------------------LRDVHAAKEQR--- 381
A++E V + + +S+ I ++ + A+KE+R
Sbjct: 303 ADELLKGVSASLEGEKVGLFSRTKSVVIQALKDSIRKIVQFEDRFLMKRILASKEERAAG 362
Query: 382 ---KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
+PYV+ GVNGVGK+T++AK+ Y + + ++ ACD+FRSGAVEQL+ H RL
Sbjct: 363 QRSRPYVICMTGVNGVGKTTSIAKLLYIFKNNGLRSLVCACDSFRSGAVEQLQEHCNRLG 422
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
++ +GY K+ + +AK I+EA D+ L+DT GR +N PLM+AL L+ N PD+
Sbjct: 423 ATLYSQGYGKNASAIAKYGIKEAESLNYDICLIDTTGRQYNNGPLMQALGALVLENAPDV 482
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
VLFVGEAL GN+ V+QL +F+ L S N + IDGI+LTKFDT DKVGAAL++ +V
Sbjct: 483 VLFVGEALTGNEGVEQLKQFD---CALKSYTNSRGIDGIILTKFDTCGDKVGAALNLCFV 539
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSI 583
P+++VG GQSY D L+ I
Sbjct: 540 CDLPILYVGTGQSYPDFGVLDPSHI 564
>gi|448515900|ref|XP_003867441.1| Srp101 protein [Candida orthopsilosis Co 90-125]
gi|380351780|emb|CCG22003.1| Srp101 protein [Candida orthopsilosis]
Length = 534
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 215/413 (52%), Gaps = 69/413 (16%)
Query: 233 SKGSNPDPKKKIT------KKNRVWDDS------PPESKLDFTDPAGGNGSNIEVEAADH 280
S GS P K+ T KK R WD+S LD++ G + S
Sbjct: 135 SNGSKPQMKQAHTQKQPSSKKMRKWDNSGEMVDYSDNQVLDYSSSQGQDTS------TQP 188
Query: 281 GESMMDKEEVFSSDSESEEDEEVG---------KHNKPDAKKTGWFSSMFQSIAGKANLD 331
E ++ E F+ DS+ E+ + ++ +K TG+F + G ++D
Sbjct: 189 KEMKVNNEAAFTKDSDLVLVNELNDILNESDEDEEDEAQSKPTGFFGKIGSYFGGSIDVD 248
Query: 332 KA-----------DLEPA-----LKALKDRLMTK--NVAAMEEALV----RILTPRRSID 369
+ ++ P+ + LK RL K N+A ++ LV +ILTP S D
Sbjct: 249 EVSKKFNEQLISKNIAPSTAKTIIDKLKSRLAGKKVNMATYKQTLVDELTKILTPNVSTD 308
Query: 370 ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
+L ++ R PYV+ VGVNGVGKSTNLAK+AYW LQ+ ++V++ ACDTFRSGAVEQ
Sbjct: 309 LLYEIKRNDTGR-PYVISVVGVNGVGKSTNLAKLAYWFLQNNLNVLICACDTFRSGAVEQ 367
Query: 430 LRTHARRL-----------QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGR 476
L+ H L ++ +FEKGY +V AK AIQ AT DV+L+DTAGR
Sbjct: 368 LKVHVNNLDRLNLEFSNKSKIALFEKGYGSGDHVVQTAKSAIQYATEEHFDVMLIDTAGR 427
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDG 536
N LM L K NP+ ++ VGEALVG D+V+Q FN N + +D
Sbjct: 428 THSNAKLMAPLKKFGDAANPNKIIMVGEALVGTDSVEQAINFNNAFG------NRRNLDF 481
Query: 537 ILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+++K DT+ D VG ++MV + P++FVG GQ+YTD+K+L+VK +V L K
Sbjct: 482 FIISKVDTVGDLVGTMINMVMATKVPILFVGTGQTYTDIKRLSVKQVVDMLTK 534
>gi|344234632|gb|EGV66500.1| hypothetical protein CANTEDRAFT_132751 [Candida tenuis ATCC 10573]
Length = 537
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 175/317 (55%), Gaps = 51/317 (16%)
Query: 313 KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------- 352
K+G+ S N+D+ K ++L++KNVA
Sbjct: 232 KSGFLSKFTSYFGSSINIDEVS-----KQFHEQLISKNVAPQTARQILDRIKNQLKGKSV 286
Query: 353 -------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
A+ + L + L+P S D+L D+ A + +PYV+ VGVNGVGKSTNLAK+AY
Sbjct: 287 TLANFKKALVDELTKTLSPNVSTDLLYDIKAKANRGRPYVISVVGVNGVGKSTNLAKLAY 346
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-----------QVPIFEKGYEKDPAIV- 453
W LQ+ + V++ ACDTFRSGAVEQL+ H L ++ IFEKGY +V
Sbjct: 347 WFLQNDLDVLICACDTFRSGAVEQLKVHVNNLKALNANMNSNAKIDIFEKGYGGGDHVVA 406
Query: 454 -AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
AK AIQ DV+L+DTAGR N LM L K NPD ++ VGEALVG D+V
Sbjct: 407 TAKAAIQYGATEKFDVILIDTAGRTHSNAKLMAPLKKFGDAANPDKIIMVGEALVGTDSV 466
Query: 513 DQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY 572
+Q + FN N + +D +++K DT+ D +G ++MV + P++F+G GQ+Y
Sbjct: 467 EQATNFNNAFG------NKRNLDFFIISKVDTVGDLMGTMINMVMATNVPILFMGTGQTY 520
Query: 573 TDLKKLNVKSIVKTLLK 589
TD+K+LNVK+IV L++
Sbjct: 521 TDIKRLNVKTIVDNLMR 537
>gi|223478342|ref|YP_002582680.1| Signal recognition particle receptor protein FtsY subunit alpha
[Thermococcus sp. AM4]
gi|214033568|gb|EEB74395.1| Signal recognition particle receptor protein FtsY, alpha subunit
[Thermococcus sp. AM4]
Length = 328
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 160/236 (67%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA++ +LTP R I++L ++ A KE KPYV+VFVG NG GK+T +AK+A+WL ++ +
Sbjct: 102 AVKEAVLEVLTPPRKINLLEEIRAKKE--KPYVIVFVGFNGSGKTTTIAKLAHWLKKNGL 159
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + Y DPA VA +AIQ A G DVVLVD
Sbjct: 160 SVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLVD 219
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG++L GN +DQ +FN+ +
Sbjct: 220 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNSIIDQARQFNEAVR--------- 270
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DLK + K V +
Sbjct: 271 -IDGVILTKLDA-DSRGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVNLIF 324
>gi|4140392|gb|AAD11975.1| signal receptor alpha subunit [Giardia intestinalis]
Length = 571
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 178/625 (28%), Positives = 294/625 (47%), Gaps = 103/625 (16%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M +QL GL++W + + PID LI +E+R+ + + + Y L
Sbjct: 1 MFDQLAFVHTSGLVIWQSTKQPDTY---PIDHLITLVYVEKRAIPSPYVLE----GYALH 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA 120
+ + EL + +A+ ++ L + +D+L M F + +++ R L E
Sbjct: 54 YLYIKELSMFAIAIIKQGLTVSGAEDILLAMTHLFIK----------EYEASIRVLPVE- 102
Query: 121 EARAEELKKS--KQVTKPMNNLKKQGGQLQKGGFE-RGSNRSGGGSANDDGDSDNMRGRK 177
A+E +S Q + +L G L + G + +N+ D D++ G K
Sbjct: 103 --YAKETYQSFDAQYDGNLKSLISTGKTLHERGLSVQQTNQESTAKDTAQLDPDSI-GDK 159
Query: 178 LENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSN 237
+ + ++ ++ +E+ + + I + + LR K+ + K SN
Sbjct: 160 VVDLSADAASINLEDVK------------AKIKQMAFERQESLR--ASKRLSGLPDKKSN 205
Query: 238 -PDPKKKITKKNRVWDDSPPESKLDFTDPAGGN-GSNIEVEAADHGESMMDKEEVFSSDS 295
P+ K + +R D+ SK++ T + N + EV A S+ D + + + S
Sbjct: 206 ETTPQAK--RNDRQVDEFLQYSKVETTKSSAANIIAEPEVSQASKPSSISDAKHITFTPS 263
Query: 296 ESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---- 351
++F K L D+E L +L+ L+ +NV
Sbjct: 264 R---------------------EAVFGLFNNKKELTSNDVEKLLSSLRQALINQNVASDV 302
Query: 352 ---------AAMEEALVRILTPRRSIDI------------------LRDVHAAKEQR--- 381
A++E V + + +S+ I ++ + A+KE+R
Sbjct: 303 ADELLKGVSASLEGEKVGLFSRTKSVVIQALKDSIRKIVQFEDRFLMKRILASKEERAAG 362
Query: 382 ---KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
+PYV+ GVNGVGK+T++AK+ Y + ++ ACD+FRSGAVEQL+ H RL
Sbjct: 363 QRSRPYVICMTGVNGVGKTTSIAKLLYIFKNNGSRSLVCACDSFRSGAVEQLQEHCNRLG 422
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
++ +GY K+ + +AK I+EA D+ L+DT GR +N PLM+AL L+ N PD+
Sbjct: 423 ATLYSQGYGKNASAIAKYGIKEAESLNYDICLIDTTGRQYNNGPLMQALGALVLENAPDV 482
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
VLFVGEAL GN+ V+QL +F+ L S N + IDGI+LTKFDT DKVGAAL++ +V
Sbjct: 483 VLFVGEALTGNEGVEQLKQFD---CALKSYTNSRGIDGIILTKFDTCGDKVGAALNLCFV 539
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSI 583
P+++VG GQSY D L+ I
Sbjct: 540 CDLPILYVGTGQSYPDFGVLDPSHI 564
>gi|240103695|ref|YP_002960004.1| GTP-binding signal recognition particle receptor [Thermococcus
gammatolerans EJ3]
gi|239911249|gb|ACS34140.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54)
(FtsY/SRP54) [Thermococcus gammatolerans EJ3]
Length = 328
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/236 (47%), Positives = 160/236 (67%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA++ +LTP R I++L ++ A KE KPYV+VFVG NG GK+T +AK+A+WL ++ +
Sbjct: 102 AVKEAVLEVLTPPRKINLLEEIRAKKE--KPYVIVFVGFNGSGKTTTIAKLAHWLKKNGL 159
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + Y DPA VA +AIQ A G DVVLVD
Sbjct: 160 SVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLVD 219
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG++L GN +DQ +FN+ +
Sbjct: 220 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNSIIDQARQFNEAVK--------- 270
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DL+ + K V +
Sbjct: 271 -IDGVILTKLDA-DSRGGAALSISHAIGAPILFVGVGQGYEDLRPFDEKWFVNLIF 324
>gi|308159913|gb|EFO62429.1| Signal recognition particle receptor [Giardia lamblia P15]
Length = 571
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 177/631 (28%), Positives = 290/631 (45%), Gaps = 115/631 (18%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M +QL GL +W + +A PID LI +E+R+ + + S Y L
Sbjct: 1 MFDQLAFVHTSGLTIWQSAKQPDA---CPIDQLITLVYVEKRAVPSPYVLGS----YALY 53
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK---------RTDYSDFDE 111
+ + EL + +A ++ L + V+D+L M F + Y+ + Y FD
Sbjct: 54 YLYVKELSMFAIATIKQGLTVSGVEDILLAMTHLFIKEYEASIRVLPVEYIKETYQAFD- 112
Query: 112 MFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFE-RGSNRSGGGSANDDGDS 170
Q + + +L G L + G + + + D
Sbjct: 113 -------------------AQYDRNLKSLISTGKTLHERGLSAQQTTQESTTKGTTQLDP 153
Query: 171 DNMRGRKLE-NGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTD 229
DN+ + +E + S N+E ++++ +A ++ + LR K+
Sbjct: 154 DNLEDKVVELSADSTSINLEDVKAKIKQMAFERQ--------------ESLR--ASKRLS 197
Query: 230 TVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEE 289
+ K SN + + TK+N D + L + S IE + + + + E
Sbjct: 198 GLPDKKSNENTPQ--TKRN----DQQIDEFLQY--------SRIEAKKSSAANIIAEPEV 243
Query: 290 VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTK 349
+ +S S S D G F++ K L D+E L +L+ L+ +
Sbjct: 244 LQASKSSSITDAISLTFTPSKETVFGLFNN-------KKELTSNDIEKLLSSLRQALINQ 296
Query: 350 NVAA-------------MEEALVRILTPRRSID------------------ILRDVHAAK 378
NVA+ +E + + + +S+ +++ + A+K
Sbjct: 297 NVASDVADELLKGVSANLEGEKIGLFSRTKSVVTQALKDSIKKIVQFEDRFLMKRILASK 356
Query: 379 EQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
E+R +PYV+ GVNGVGK+T++AK+ Y + + ++ ACD+FRSGAVEQL+
Sbjct: 357 EERAAGQRSRPYVICMTGVNGVGKTTSIAKLLYIFKNNGLRSLVCACDSFRSGAVEQLQE 416
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
H RL ++ +GY K+ + +AK I+EA D+ L+DT GR +N PLM+AL L+
Sbjct: 417 HCNRLGATLYSQGYGKNASAIAKYGIKEAESLNYDICLIDTTGRQYNNGPLMQALGALVL 476
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
N PD+VLFVGEAL GN+ ++QL +F+ L S N + IDGI+LTKFDT DKVGAA
Sbjct: 477 ENTPDVVLFVGEALTGNEGIEQLKQFD---CALKSYTNSRGIDGIILTKFDTCGDKVGAA 533
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
L++ +V P+++VG GQSY D L+ I
Sbjct: 534 LNLCFVCDLPILYVGIGQSYPDFGVLDPSHI 564
>gi|315230267|ref|YP_004070703.1| FtsY-like signal recognition particle receptor protein subunit
alpha [Thermococcus barophilus MP]
gi|315183295|gb|ADT83480.1| FtsY-like signal recognition particle receptor protein, alpha
subunit [Thermococcus barophilus MP]
Length = 300
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 160/236 (67%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +A++ +LTP R I++L + A KE KP+V+VFVG NG GK+T +AK+A+WL +H +
Sbjct: 76 AVRKAVLEVLTPERKINLLEMIKAKKE--KPFVIVFVGFNGSGKTTTIAKLAHWLKKHGL 133
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
S ++AA DTFR+GA+EQ+ HARR+ V + + Y DPA VA +AIQ A G DVVLVD
Sbjct: 134 SSVIAASDTFRAGAIEQVEEHARRVGVKVIKHRYGADPAAVAYDAIQHAKARGVDVVLVD 193
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG+AL GN ++Q +FN+ +
Sbjct: 194 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDALAGNAIIEQARQFNEAVK--------- 244
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DLK+ + K +++ +
Sbjct: 245 -IDGVILTKLDA-DARGGAALSISHAIGAPILFVGIGQGYDDLKEFDEKWMIEKIF 298
>gi|189212014|ref|XP_001942334.1| signal recognition particle receptor subunit alpha [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979533|gb|EDU46159.1| signal recognition particle receptor subunit alpha [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1338
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 277/585 (47%), Gaps = 114/585 (19%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----- 55
ML+ + T G++LW+ + + + I++LIR +EER + AG+
Sbjct: 1 MLDTFEVLTTSGVVLWSRTYV--PVGANVINSLIRDVFIEER---IQPQAEDAGSKPTYK 55
Query: 56 --AYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPK-RTDYSD---- 108
YTLKWT +LGL+FVAVYQ ++HL ++D LL ++ F +Y + +T S
Sbjct: 56 KEGYTLKWTAAKDLGLIFVAVYQSLVHLTWIDKLLDNVRALFVGLYGEQLKTQNSSVVKC 115
Query: 109 --FDEMFRQLRKEAEARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSAND 166
F F + +E E ++ S ++ P ++ + ND
Sbjct: 116 DKFGSYFDRQMQELEGASDSGTPSIKLITPESS-----------------------TDND 152
Query: 167 DGDSDNMRGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQ--KLRNKG 224
D ++ L+ ++ + + + V + T + S+L K R G
Sbjct: 153 SADETALKPPGLQKPQPSLYDTSADSTPVPTPDTSRPTTPAQ------SQLLTGKARPLG 206
Query: 225 GK--KTDTVVSKGSNPDP-----------KKKITKKNRVW--------DDSPPE-SKLDF 262
GK + D + + P K K +KK RVW DDS + S+ D
Sbjct: 207 GKISRRDKKKASAFSSAPVSSGDEASAKKKGKGSKKGRVWGEFGADEEDDSVLDYSRSDI 266
Query: 263 TDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT-------- 314
GN + E++ G +K E D + E D + + N K T
Sbjct: 267 QGDVSGNEALEEIKQETWGRKT-NKGEFVLRDLDDEMDAIIAEQNAKKDKDTPAAASGLV 325
Query: 315 ----GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------ 352
G +F+++ G L K DL LK +++ L+ KNVA
Sbjct: 326 GSSLGAIGGLFRNVVGGKTLTKEDLAKPLKGMEEHLLRKNVAREAAVRLCESVERDLTLK 385
Query: 353 -AMEEALVRILTPRRSIDILRDV-HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ME+AL +ILTP S+D+LR++ H +PYV+ VGVNGVGKSTNL+K+A++LLQ+
Sbjct: 386 TSMEKALTKILTPTSSLDLLREIQHTNSTTTRPYVLSIVGVNGVGKSTNLSKIAFFLLQN 445
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKDPAIVAKEAIQEA 461
V++AA DTFRSGAVEQLR H RL V +FEKGY KD A +A +A+ A
Sbjct: 446 HHRVLIAAADTFRSGAVEQLRVHVDRLKELSQREGGHVDLFEKGYGKDAANIAADAVTFA 505
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
+N ++VL+DTAGR +++ LM +L K L NPD +L VGEAL
Sbjct: 506 AKNNFNIVLIDTAGRRHNDQRLMSSLEKFGKLANPDKILMVGEAL 550
>gi|388503968|gb|AFK40050.1| unknown [Lotus japonicus]
Length = 113
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/113 (93%), Positives = 110/113 (97%)
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDG 536
MQDNEP MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL++SPNP+LIDG
Sbjct: 1 MQDNEPPMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLATSPNPRLIDG 60
Query: 537 ILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ILLTKFDTIDDKVGAALSMVY+ GAPVMFVGCGQ YTDLKKLNVKSIVKTLLK
Sbjct: 61 ILLTKFDTIDDKVGAALSMVYIFGAPVMFVGCGQFYTDLKKLNVKSIVKTLLK 113
>gi|55420633|gb|AAV52172.1| signal recognition particle receptor alpha subunit [Caenorhabditis
remanei]
Length = 183
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 141/181 (77%), Gaps = 7/181 (3%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK +PYV+VF GVNGVGKSTNLAK+ +WL ++K V++AA DTFR+GAVEQLRTH R
Sbjct: 3 AKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENKHRVLIAAGDTFRAGAVEQLRTHTRH 62
Query: 437 LQ------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL 490
L V ++E+GY KD A +A AI+ A DVVLVDTAGRMQDNEPLMR L+KL
Sbjct: 63 LNALHPQSVHLYEQGYGKDAAGLAAAAIKIAAERDFDVVLVDTAGRMQDNEPLMRELAKL 122
Query: 491 IYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLIDGILLTKFDTIDDKV 549
I +N PDLVLFVGEALVGN+AVDQL KFN+ LA+ ++ P+LIDGI+LTKFDTIDDKV
Sbjct: 123 IRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHAAPGAKPRLIDGIVLTKFDTIDDKV 182
Query: 550 G 550
G
Sbjct: 183 G 183
>gi|328352201|emb|CCA38600.1| Signal recognition particle receptor subunit alpha [Komagataella
pastoris CBS 7435]
Length = 558
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 215/407 (52%), Gaps = 64/407 (15%)
Query: 234 KGSNPDPKKKITKKNRVWD--------DSPPESKLDFTDPAG--GNGSNIEVEAADHGES 283
KG P +K KK R WD D ES LDF+ GN + ++G++
Sbjct: 163 KGKKPQLTQK--KKARRWDTQGNPIEDDGLEESDLDFSSTTSEVGNQDVGHLVGDNYGKT 220
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDA--KKTGWFSSMFQSIAGKANLDKADLEPALKA 341
K+ F E ++ + K + TG FS + +GK + + DL K+
Sbjct: 221 ---KDGKFLVSDMKEINDILSKQRDKSVSDESTGAFSFLSGLFSGKT-VTEDDLTKTSKS 276
Query: 342 LKDRLMTKNVAA---------MEEALV---------------------RILTPRRSIDIL 371
L + L+ KNVA + ++LV ++LTP SI++L
Sbjct: 277 LSEHLINKNVAPEIAKKLVERINKSLVGTKVTTSIPKAARNALEKELLKLLTPETSINLL 336
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
+++ + K RKPYV+ VGVNGVGKSTNL+K+A+WLL +K V++ ACDTFRSGAVEQLR
Sbjct: 337 KEIQSKKAARKPYVISVVGVNGVGKSTNLSKLAFWLLSNKYRVLITACDTFRSGAVEQLR 396
Query: 432 THARRLQ--------VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
H L+ V +F+ GY + +AK AIQ A N D+VL+DTAGR ++
Sbjct: 397 VHVNNLKKLTEDESHVELFQGGYGGADLVSKIAKGAIQYAEENKFDIVLLDTAGRRHNDA 456
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTK 541
LM L + PD ++ VGEALVG D+V Q FN P + +D +++K
Sbjct: 457 QLMAPLQGFVKAAKPDKIIMVGEALVGTDSVQQAKNFNGAFG-----PG-RTLDFFIISK 510
Query: 542 FDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DT+ D +G+ ++MVY +G P++FVG GQ+YTDL+ L+V V TL+
Sbjct: 511 CDTVGDLIGSMVNMVYATGIPILFVGTGQTYTDLRTLSVDWAVDTLM 557
>gi|172707|gb|AAA35093.1| SRP receptor alpha-chain homologue [Saccharomyces cerevisiae]
Length = 621
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 226/445 (50%), Gaps = 87/445 (19%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + ++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ A D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYARDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ+YTDL+ L+VK V TL+
Sbjct: 596 LFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|358379267|gb|EHK16947.1| signal recognition particle receptor alpha subunit, Srp101
[Trichoderma virens Gv29-8]
Length = 654
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 186/320 (58%), Gaps = 54/320 (16%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
S +F+++ G L K DL+ A+K +++ L+ KNVA
Sbjct: 338 ISGLFRNVVGGKTLTKEDLDKAMKGMEEHLLRKNVAREAAVRLCEGVEKELVGVKTGNFE 397
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKS 397
AME +L ++LTP S+D+LR++ + + + +PYV+ VGVNGVGKS
Sbjct: 398 SINAKIQTAMESSLTKMLTPTSSLDLLREIDSITAPPVTSLRKPRPYVISIVGVNGVGKS 457
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---------VPIFEKGYEK 448
TNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L+ V +++KGY K
Sbjct: 458 TNLSKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGKVELYQKGYGK 517
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A VAK+A+ A + G DVVL+DTAGR +++ LM +L K PD +L VGEALVG
Sbjct: 518 DAAAVAKDAVNHAAQEGYDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVG 577
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
D+V Q FN + + +DG +++K DT+ D VG +S+V+ + PV+FVG
Sbjct: 578 TDSVAQARNFNAAFG------SDRALDGFIISKCDTVGDMVGTLVSLVHATNVPVVFVGV 631
Query: 569 GQSYTDLKKLNVKSIVKTLL 588
GQ Y+DL+ +VK V LL
Sbjct: 632 GQHYSDLRNFSVKWAVGKLL 651
>gi|367001871|ref|XP_003685670.1| hypothetical protein TPHA_0E01410 [Tetrapisispora phaffii CBS 4417]
gi|357523969|emb|CCE63236.1| hypothetical protein TPHA_0E01410 [Tetrapisispora phaffii CBS 4417]
Length = 621
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 187/356 (52%), Gaps = 68/356 (19%)
Query: 295 SESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-- 352
S+ E + KP +S + +++ G + K DL L+ LK +L++KNVA
Sbjct: 271 SQKELSNQKNTEGKPKGFMGSAYSYLQKNVIGNKTITKDDLNIILEELKQQLISKNVAPE 330
Query: 353 ------------------------------AMEEALVRILTPRRSIDILRDVHA------ 376
++ +AL +ILTP S+D+L +V
Sbjct: 331 AADFLAQQVSRDLLGSKTSNWTSVQSAANDSLTKALTQILTPGISVDLLHEVQKKTSTLD 390
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
A +++PY+ VGVNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H
Sbjct: 391 ADGKKQPYIFSVVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVEN 450
Query: 437 L----------------------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVD 472
L V +FE GY + +AK+AI+ A N D+VL+D
Sbjct: 451 LAQLTEESHVRGSKNKRGKSGNDSVELFEAGYGGSDLVTKIAKQAIKYAKDNSFDIVLMD 510
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR ++ LM L NPD ++ VGEALVG D+V Q FN + +
Sbjct: 511 TAGRRHNDPTLMSPLKSFAEQANPDKIIMVGEALVGTDSVQQAKNFNDAFGKVRN----- 565
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+D +L++K DT+ +G+ ++MVY +G P++FVG GQ+YTDL+ L+VK V TL+
Sbjct: 566 -LDFLLISKCDTVGTMLGSMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVDTLM 620
>gi|213404072|ref|XP_002172808.1| signal recognition particle receptor subunit alpha
[Schizosaccharomyces japonicus yFS275]
gi|212000855|gb|EEB06515.1| signal recognition particle receptor subunit alpha
[Schizosaccharomyces japonicus yFS275]
Length = 527
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 173/286 (60%), Gaps = 22/286 (7%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAAM--------EEALVRILTPRRSIDI 370
S F ++ G+ L + DL+P L ++ L+ KNVA + + R R S+D+
Sbjct: 249 SFFSNLIGQKTLTEKDLKPVLAKMQQHLIEKNVAQLGGPTALRFTSFIARGQEDRTSLDL 308
Query: 371 LRDVHAA-KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
L +V K++ +PY + +GVNGVGKST L+++AYWLL +K+ +++AACDTFRSGA+EQ
Sbjct: 309 LNNVQMVRKKEARPYTISLIGVNGVGKSTTLSRLAYWLLSNKLRILVAACDTFRSGAIEQ 368
Query: 430 LRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
L H L+ + +F +GY KD +IV K A+Q A++N DV+LVDTAGR +++ L
Sbjct: 369 LNVHVTNLKKVHGDNIELFAQGYGKDASIVVKNAVQYASQNNFDVILVDTAGRRHNDQRL 428
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
M +L K D + V EALVG D++ Q F +S + +DG +++K D
Sbjct: 429 MGSLEKFTKATKLDKIFQVAEALVGTDSLAQAKHFQ-------ASLYHRRLDGFIISKVD 481
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ + VG + MVY + P++FVG GQ+Y+DL+ L+V +V L++
Sbjct: 482 AVGELVGVMVGMVYTTHVPIVFVGVGQTYSDLRTLSVDWVVDQLMR 527
>gi|256271803|gb|EEU06834.1| Srp101p [Saccharomyces cerevisiae JAY291]
Length = 621
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 227/445 (51%), Gaps = 87/445 (19%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + +++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKEEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ + D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ+YTDL+ L+VK V TL+
Sbjct: 596 LFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|323309627|gb|EGA62835.1| Srp101p [Saccharomyces cerevisiae FostersO]
Length = 621
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 226/445 (50%), Gaps = 87/445 (19%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + ++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ + D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ+YTDL+ L+VK V TL+
Sbjct: 596 LFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|320582191|gb|EFW96409.1| Signal recognition particle (SRP) receptor-alpha subunit [Ogataea
parapolymorpha DL-1]
Length = 550
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/247 (44%), Positives = 160/247 (64%), Gaps = 17/247 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRK-PYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
++E+ L+++LTP SID+L+++ A K PYV+ VGVNGVGKSTNL+K+AYWLLQ+
Sbjct: 309 SLEKQLIKLLTPNNSIDLLKEIQAKKASNNLPYVISVVGVNGVGKSTNLSKLAYWLLQNN 368
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRL--------QVPIFEKGYEKDPAI--VAKEAIQEA 461
V++ ACDTFRSGAVEQLRTH L Q+ +FE GY + +A AI+ A
Sbjct: 369 YRVLITACDTFRSGAVEQLRTHVNNLTKLSPDQKQIELFEGGYGGADLVAKIATGAIKYA 428
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
+N D+VL+DTAGR ++ LM L+ NPD ++ VGEALVG D+V Q FN+
Sbjct: 429 KQNNFDIVLLDTAGRRHNDTQLMAPLASFAKAANPDKIIMVGEALVGTDSVLQAQNFNKA 488
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVK 581
+ + +D +++K DT+ D +G+ +++VY +G P++FVG GQ+YTDL+ L+V
Sbjct: 489 FG------SNRHLDFFIVSKCDTVGDLIGSMVNLVYATGIPILFVGNGQTYTDLRTLSVD 542
Query: 582 SIVKTLL 588
V L+
Sbjct: 543 WAVSMLM 549
>gi|151942264|gb|EDN60620.1| Signal recognition particle (SRP) subunit [Saccharomyces cerevisiae
YJM789]
gi|259145529|emb|CAY78793.1| Srp101p [Saccharomyces cerevisiae EC1118]
Length = 621
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 226/445 (50%), Gaps = 87/445 (19%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + ++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ + D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ+YTDL+ L+VK V TL+
Sbjct: 596 LFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|190404765|gb|EDV08032.1| hypothetical protein SCRG_00238 [Saccharomyces cerevisiae RM11-1a]
gi|323355613|gb|EGA87433.1| Srp101p [Saccharomyces cerevisiae VL3]
gi|349577343|dbj|GAA22512.1| K7_Srp101p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766363|gb|EHN07861.1| Srp101p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 621
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 226/445 (50%), Gaps = 87/445 (19%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + ++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ + D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ+YTDL+ L+VK V TL+
Sbjct: 596 LFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|398366427|ref|NP_010578.3| Srp101p [Saccharomyces cerevisiae S288c]
gi|2507410|sp|P32916.2|SRPR_YEAST RecName: Full=Signal recognition particle receptor subunit alpha
homolog; Short=SR-alpha; AltName: Full=Docking protein
alpha; Short=DP-alpha
gi|1230656|gb|AAB64468.1| Srp101p: Signal recognition particle receptor alpha subunit homolog
(Swiss Prot. accession number P32916) [Saccharomyces
cerevisiae]
gi|285811307|tpg|DAA12131.1| TPA: Srp101p [Saccharomyces cerevisiae S288c]
gi|392300405|gb|EIW11496.1| Srp101p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 621
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 226/445 (50%), Gaps = 87/445 (19%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + ++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ + D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+FVG GQ+YTDL+ L+VK V TL+
Sbjct: 596 LFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|406606923|emb|CCH41645.1| hypothetical protein BN7_1186 [Wickerhamomyces ciferrii]
Length = 565
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 205/400 (51%), Gaps = 64/400 (16%)
Query: 243 KITKKNRVWD-----DSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSES 297
K TKK R W + + +LDF+ SN + S +D E + DS++
Sbjct: 175 KNTKKFRKWGADGMVEEDSDFQLDFSSGDIQQNSN-SAQTESSLASQIDTENYGNKDSKT 233
Query: 298 ---------EEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMT 348
+E E + +K ++T + G + D++ L L++ L+
Sbjct: 234 GAFLVKDLNDEIEAILNSSKKKQQETKEPFGFLKKFTGGKTITSEDIKSTLSELQNHLIR 293
Query: 349 KNVA--------------------------------AMEEALVRILTPRRSIDILRDVHA 376
KNVA A+ AL +ILTP S+++L+D+ A
Sbjct: 294 KNVAPEVAQHLTHNVEKALVGSKTKNWTSIQQTAKEALANALTKILTPGTSVNLLQDIRA 353
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
K KPYV+ VGVNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H
Sbjct: 354 NK---KPYVISVVGVNGVGKSTNLSKLAFWLLQNDFKVLIVACDTFRSGAVEQLRVHVNN 410
Query: 437 L------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
L Q+ +FE GY + +AK AI+ A + D++L+DTAGR ++ LM L+
Sbjct: 411 LKRSNEDQIELFEGGYGGSDLVAKIAKNAIEYAKKQEFDIILMDTAGRRHNDARLMAPLA 470
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
NP+ ++ VGEALVG D+V Q FN + +D +++K DT+ D
Sbjct: 471 SFAKAANPNKIIMVGEALVGTDSVQQAKNFNNAFGA------GRTLDFFIISKCDTVGDL 524
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G ++MVY + P++FVG GQ+YTDL+ L+V+ V L+
Sbjct: 525 IGTMVNMVYATNIPILFVGVGQTYTDLRTLSVEWAVNILM 564
>gi|254568342|ref|XP_002491281.1| Signal recognition particle (SRP) receptor-alpha subunit
[Komagataella pastoris GS115]
gi|238031078|emb|CAY69001.1| Signal recognition particle (SRP) receptor-alpha subunit
[Komagataella pastoris GS115]
Length = 558
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 215/407 (52%), Gaps = 64/407 (15%)
Query: 234 KGSNPDPKKKITKKNRVWD--------DSPPESKLDFTDPAG--GNGSNIEVEAADHGES 283
KG P +K KK R WD D ES LDF+ GN + ++G++
Sbjct: 163 KGKKPQLTQK--KKARRWDTQGNPIEDDGLEESDLDFSSTTSEVGNQDVGHLVGDNYGKT 220
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDA--KKTGWFSSMFQSIAGKANLDKADLEPALKA 341
K+ F E ++ + K + TG FS + +GK + + +L K+
Sbjct: 221 ---KDGKFLVSDMKEINDILSKQRDKSVSDESTGAFSFLSGLFSGKT-VTEDNLTKTSKS 276
Query: 342 LKDRLMTKNVAA---------MEEALV---------------------RILTPRRSIDIL 371
L + L+ KNVA + ++LV ++LTP SI++L
Sbjct: 277 LSEHLINKNVAPEIAKKLVERINKSLVGTKVTTSIPKAARNALEKELLKLLTPETSINLL 336
Query: 372 RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
+++ + K RKPYV+ VGVNGVGKSTNL+K+A+WLL +K V++ ACDTFRSGAVEQLR
Sbjct: 337 KEIQSKKAARKPYVISVVGVNGVGKSTNLSKLAFWLLSNKYRVLITACDTFRSGAVEQLR 396
Query: 432 THARRLQ--------VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNE 481
H L+ V +F+ GY + +AK AIQ A N D+VL+DTAGR ++
Sbjct: 397 VHVNNLKKLTEDESHVELFQGGYGGADLVSKIAKGAIQYAEENKFDIVLLDTAGRRHNDA 456
Query: 482 PLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTK 541
LM L + PD ++ VGEALVG D+V Q FN P + +D +++K
Sbjct: 457 QLMAPLQGFVKAAKPDKIIMVGEALVGTDSVQQAKNFNGAFG-----PG-RTLDFFIISK 510
Query: 542 FDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DT+ D +G+ ++MVY +G P++FVG GQ+YTDL+ L+V V TL+
Sbjct: 511 CDTVGDLIGSMVNMVYATGIPILFVGTGQTYTDLRTLSVDWAVDTLM 557
>gi|390960194|ref|YP_006424028.1| signal recognition particle GTPase [Thermococcus sp. CL1]
gi|390518502|gb|AFL94234.1| signal recognition particle GTPase [Thermococcus sp. CL1]
Length = 301
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 158/236 (66%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EA++ +LTP + ID+L + + +E KP+V+ FVG NG GK+T +AK+A+WL ++ +
Sbjct: 76 AVREAVLEVLTPEKRIDLLEMIRSKEE--KPFVIAFVGFNGSGKTTTIAKLAHWLKKNGL 133
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 134 SVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGVDVVLID 193
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG++L GN V+Q +FN+ +
Sbjct: 194 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFNEAVK--------- 244
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DLK + K V+ +
Sbjct: 245 -IDGVILTKLDA-DARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIF 298
>gi|19113452|ref|NP_596660.1| signal recognition particle receptor alpha subunit Srp101
(predicted) [Schizosaccharomyces pombe 972h-]
gi|74644172|sp|O43032.1|SRPR_SCHPO RecName: Full=Signal recognition particle receptor subunit alpha
homolog; Short=SR-alpha; AltName: Full=Docking protein
alpha; Short=DP-alpha
gi|2950469|emb|CAA17783.1| signal recognition particle receptor alpha subunit Srp101
(predicted) [Schizosaccharomyces pombe]
Length = 547
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 169/305 (55%), Gaps = 47/305 (15%)
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNVA------------------------------- 352
I GK L + DL P LK +++ L KNVA
Sbjct: 251 IGGKY-LKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTVKNTVN 309
Query: 353 -AMEEALVRILTPRRSIDILRDVHAA-KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
A + L +ILTP S+D+L + + K + +PY + +GVNGVGKST LAK+AYWLL +
Sbjct: 310 KAFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSN 369
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEATRN 464
+++AACDTFRSGA+EQL H + LQ + +F +GY KD + V K A++ A +N
Sbjct: 370 NFRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQN 429
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
DV+L+DTAGR +++ LM +L K D + V EALVG D++ Q F A
Sbjct: 430 SFDVILIDTAGRRHNDQRLMGSLEKFTKATKLDKIFQVAEALVGTDSLAQAKHFQ---AS 486
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
L P +DG +++K DT+ VG + MVY P++FVG GQ+Y+DL+ L+V +V
Sbjct: 487 LYHRP----LDGFIISKVDTVGQLVGVMVGMVYAVRVPIIFVGIGQTYSDLRTLSVDWVV 542
Query: 585 KTLLK 589
L+K
Sbjct: 543 DQLMK 547
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLL-EERSGLASFNYDSAGAAYTL 59
M++ I +GG++LW K+ + + + L L E+R+ + +D YT+
Sbjct: 1 MIDLFAIVNKGGIVLW--KKTNSLVNLKCLQVLFHEAFLSEQRTVNNTVTFDR----YTM 54
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKE 119
++ + +VFV V+Q + + Y LL F ++ K D RQ+ E
Sbjct: 55 QYQEATQYSIVFVVVFQDLKCMAYSQSLLNSAHNIFLNLFKEKLED--------RQVPNE 106
Query: 120 AEA 122
AE
Sbjct: 107 AEV 109
>gi|367014561|ref|XP_003681780.1| hypothetical protein TDEL_0E03260 [Torulaspora delbrueckii]
gi|359749441|emb|CCE92569.1| hypothetical protein TDEL_0E03260 [Torulaspora delbrueckii]
Length = 603
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 205/406 (50%), Gaps = 84/406 (20%)
Query: 254 SPPESKLDFTDPAGGNGSNIEVEAAD-------HGESMMDK-EEVFSSDSE-SEEDEEVG 304
S S LDF++ + SNI + D GE ++ + +++ +S ++ ++ +VG
Sbjct: 210 SSDASGLDFSEAGSASSSNIALVDKDALGNRTKDGEFLIKEIDDLLTSQTDITKSTVQVG 269
Query: 305 KHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------ 352
N F + + + G + ++DL L L+ +LMTKNVA
Sbjct: 270 NVNSA-------FGFLKKHLLGNKTITESDLTSVLDKLRQKLMTKNVAPEAADFLAQKVS 322
Query: 353 --------------------AMEEALVRILTPRRSIDILRDVHAAKEQR------KPYVV 386
++ AL +ILTP S+D+L ++ ++ PYV
Sbjct: 323 RDLVGSKTANWTSVENTARESLTRALTQILTPGVSVDLLHEIQRKTSKKDSDGKKNPYVF 382
Query: 387 VFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL--------- 437
VGVNGVGKSTNL+K+A+WLLQ+ +V++ ACDTFRSGAVEQLR H L
Sbjct: 383 SVVGVNGVGKSTNLSKLAFWLLQNNFNVLIVACDTFRSGAVEQLRVHVENLAQLTDESHV 442
Query: 438 -------------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEP 482
V +FE GY + +AK+AI+ A D+VL+DTAGR ++
Sbjct: 443 RGSKNKRGKSGNDHVELFEAGYGGSDLVTKIAKQAIKYAKDQNFDIVLMDTAGRRHNDPT 502
Query: 483 LMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKF 542
LM L NPD ++ VGEALVG D+V Q FN + + +D +++K
Sbjct: 503 LMSPLKSFAEQANPDKIIMVGEALVGTDSVQQAKNFNNAFGKVRN------LDFFIVSKC 556
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DT+ D +G ++MVY +G P++FVG GQ+YTDL+ L+VK V L+
Sbjct: 557 DTVGDMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVDILM 602
>gi|156847719|ref|XP_001646743.1| hypothetical protein Kpol_1023p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156117423|gb|EDO18885.1| hypothetical protein Kpol_1023p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 612
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 181/350 (51%), Gaps = 72/350 (20%)
Query: 305 KHNKPDAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA-------- 352
+ N DAK +S F + + G + DL+ AL LKD+L+TKNVA
Sbjct: 268 EQNISDAKTNSTLNSAFGFLQKHLLGNKTITDDDLKSALTKLKDQLITKNVAPEAADFLT 327
Query: 353 ------------------------AMEEALVRILTPRRSIDILRDVHAAKEQ------RK 382
++ +A+ +ILTP S+D+L + Q +
Sbjct: 328 QQVSRDLVGSKTANWTSVENAAHESLTKAITQILTPGVSVDLLHQIQKKTSQPGPDGKKV 387
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ---- 438
PYV VGVNGVGKSTNL+K+A+WLLQ+ + V++ ACDTFRSGAVEQLR H L
Sbjct: 388 PYVFSVVGVNGVGKSTNLSKLAFWLLQNNLKVLIVACDTFRSGAVEQLRVHVENLAQLTD 447
Query: 439 ------------------VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQ 478
V +FE GY + +AK+AI+ A+ N D+VL+DTAGR
Sbjct: 448 ESHVRGSKNKRGKSGNDYVELFEAGYGGSDLVTKIAKQAIKYASDNDFDIVLMDTAGRRH 507
Query: 479 DNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGIL 538
++ LM L PD ++ VGEALVG D+V Q FN + +D +
Sbjct: 508 NDATLMSPLKSFAEQAKPDKIIMVGEALVGTDSVQQAKNFNNAFG------KNRNLDFFI 561
Query: 539 LTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
++K DT+ +G ++MVY +G P++FVG GQ+YTDL+ L+VK V TL+
Sbjct: 562 VSKCDTVGGMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVDTLM 611
>gi|401624199|gb|EJS42265.1| srp101p [Saccharomyces arboricola H-6]
Length = 624
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 184/345 (53%), Gaps = 72/345 (20%)
Query: 310 DAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA------------- 352
++K +G+ ++ F + + G ++ +DL+ L LK +L+TKNVA
Sbjct: 285 ESKNSGYVNTAFGFLQKHVLGNKTINDSDLKSVLDKLKQQLITKNVAPEAADYLTQQVSR 344
Query: 353 -------------------AMEEALVRILTPRRSIDILRDVHAAKEQRKP------YVVV 387
++ +AL +ILTP S+D+LR++ + + ++ P YV
Sbjct: 345 DLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSKKDPEGKSDPYVFS 404
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------- 437
VGVNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L
Sbjct: 405 IVGVNGVGKSTNLSKLAFWLLQNNFRVLIVACDTFRSGAVEQLRVHVENLAQLMDYSHVR 464
Query: 438 ------------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
V +FE GY + +AK+AI+ + D+VL+DTAGR ++ L
Sbjct: 465 GSKNKRGKSGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTL 524
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
M L PD ++ VGEALVG D+V Q FN + +D +++K D
Sbjct: 525 MSPLKSFADQAQPDKIIMVGEALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCD 578
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
T+ D +G ++MVY +G P++FVG GQ+YTDL+ L+VK V TL+
Sbjct: 579 TVGDMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 623
>gi|375082465|ref|ZP_09729522.1| cell division protein FtsY [Thermococcus litoralis DSM 5473]
gi|374742804|gb|EHR79185.1| cell division protein FtsY [Thermococcus litoralis DSM 5473]
Length = 300
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 160/236 (67%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA++ +LT R ID+L + + KE KP+V+VFVG NG GK+T +AK+A WL ++ +
Sbjct: 76 AVKEAVLEVLTHERHIDLLEMIKSKKE--KPFVIVFVGFNGSGKTTTIAKLANWLKKNGL 133
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + GY+ DPA VA +AI+ A G DVVLVD
Sbjct: 134 SVVIAASDTFRAGAIEQVEEHAKRVGVKLIKHGYKSDPAAVAYDAIEHAKARGIDVVLVD 193
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG+AL GN ++Q +FN+ +
Sbjct: 194 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDALAGNAIIEQARQFNEAVR--------- 244
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DL + K +++ +
Sbjct: 245 -IDGVILTKLDA-DARGGAALSIAHAIGAPILFVGVGQGYDDLMPFDEKWMLEKIF 298
>gi|2130562|gb|AAB58327.1| signal recognition particle receptor alpha subunit [Thermococcus
zilligii AN1]
Length = 329
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 157/236 (66%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA++ +LTP R ID++ ++ K++ KP+V+ FVG NG GK+T +AK+A+WL +
Sbjct: 104 AVKEAVLEVLTPPRRIDLIEEMR--KKEEKPFVIAFVGFNGGGKTTTIAKLAHWLKKQGF 161
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 162 SVVVAASDTFRAGAIEQLEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLID 221
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG++L GN ++Q +FN+ +
Sbjct: 222 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNSIIEQARQFNEAVR--------- 272
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DLK + + V +
Sbjct: 273 -IDGVILTKLDA-DARGGAALSISHAIGAPILFVGVGQGYDDLKPFDERWFVDLIF 326
>gi|255718069|ref|XP_002555315.1| KLTH0G06380p [Lachancea thermotolerans]
gi|238936699|emb|CAR24878.1| KLTH0G06380p [Lachancea thermotolerans CBS 6340]
Length = 586
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 226/465 (48%), Gaps = 85/465 (18%)
Query: 203 ENTSSNIGAFD------VSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITK-----KNRVW 251
E SN+ FD S ++ + KG + SKGS+ K K K R W
Sbjct: 127 EGCDSNLNKFDEYFRAKFSVIKPGKAKGKPSVEGNASKGSSLTGSKNNKKTVQNAKTRKW 186
Query: 252 DDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESE----EDEEVGKHN 307
+ + D + + S + EA + +DKE + + E E +E+ N
Sbjct: 187 GRDGIIEETNVGDSSALDFSELNEEARASSLAEVDKEAFGTFTEKGEFLINEIDELLNKN 246
Query: 308 KPDAKKTGW-----FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------- 352
K +A K G F + + + G + K DL L+ + +L++KNVA
Sbjct: 247 KAEASKKGQSTGGAFGFLQKHLLGNKKITKEDLSKVLEKFRQKLISKNVAPEAADHLTSR 306
Query: 353 ----------------------AMEEALVRILTPRRSIDILRDVH---AAKEQRKPYVVV 387
+++++L ILTP S+D+LR++ ++ PY+
Sbjct: 307 VSQDLVGSTTANWTSVELTARDSLQKSLTEILTPGVSVDLLREIQQKTGKNGKKTPYIFS 366
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------- 437
VGVNGVGKSTNL+K+A+WLLQ+ + V++ ACDTFRSGAVEQLR H L
Sbjct: 367 VVGVNGVGKSTNLSKLAFWLLQNNLRVLVVACDTFRSGAVEQLRVHVENLAQLTDEAHIR 426
Query: 438 ------------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
+ +FE GY + +AK+AI+ A+ DVVL+DTAGR ++ L
Sbjct: 427 GSKNRRGKSGNDHIELFEAGYGGSDLVTKIAKQAIKYASDQNFDVVLMDTAGRRHNDPTL 486
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD 543
M L PD ++ VGEALVG D+V Q FN A N +D +++K D
Sbjct: 487 MSPLKPFADQAKPDKIIMVGEALVGTDSVQQAKNFN---AAFGKERN---LDFFIISKCD 540
Query: 544 TIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
T+ + +G ++MVY +G P++FVG GQ+YTDL+ L+V+ V TL+
Sbjct: 541 TVGEMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVEWAVDTLM 585
>gi|320589543|gb|EFX02004.1| signal sequence receptor alpha [Grosmannia clavigera kw1407]
Length = 669
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 184/319 (57%), Gaps = 56/319 (17%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F+++ G L + DL+ A+K ++D L+ KNVA
Sbjct: 354 LFRNVVGGKTLTREDLDKAMKGMEDHLLRKNVAREAAVRLCESVEADLVGVKTGNFESTN 413
Query: 353 -----AMEEALVRILTPRRSIDILRDVHAAK-------EQRKPYVVVFVGVNGVGKSTNL 400
A+E AL ++LTP S+D+LR++ A + +PYV+ VGVNGVGKSTNL
Sbjct: 414 ARVKTALEAALTKMLTPTSSLDLLREIDAVTAPPVTSLRKPRPYVISIVGVNGVGKSTNL 473
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-----------VPIFEKGYEKD 449
+K+ ++LLQ++ V++AA DTFRSGAVEQL H R LQ V ++++GY KD
Sbjct: 474 SKICFFLLQNRYRVLIAAGDTFRSGAVEQLAVHVRNLQELTSRDQNGSAVELYQRGYGKD 533
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
A VAK+A+ A + G DVVL+DTAGR +++ LM +L K +PD +L VGEALVG
Sbjct: 534 AAAVAKDAVAFAAQKGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAHPDKILMVGEALVGT 593
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
D+V Q FN S +DG +++K DT+ VG +S+V+ + P++FVG G
Sbjct: 594 DSVAQARSFNSAFGSNRS------LDGFIISKCDTVGGMVGTLVSLVHATNVPILFVGVG 647
Query: 570 QSYTDLKKLNVKSIVKTLL 588
Q Y+DL+ +VK V+ LL
Sbjct: 648 QHYSDLRNFSVKWAVERLL 666
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 22/139 (15%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSP--IDTLIRSCLLEER-SGLASFNYDSAGAA- 56
ML+ I T G++LW+ N SP ++ I +EE SG + ++G++
Sbjct: 1 MLDSFEIVTTSGVVLWS----RNYAFVSPAIVNKFITDVFIEENASGAVTKEEIASGSSH 56
Query: 57 -------YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT----- 104
Y +KW F +LG++FVAVY+ +LHL ++D L+ +K F+ +Y + T
Sbjct: 57 APYLADQYAVKWAFVKDLGIIFVAVYKSLLHLSWIDKLVENIKTIFASLYGEQLTRPHTT 116
Query: 105 --DYSDFDEMFRQLRKEAE 121
+ + FD F Q E E
Sbjct: 117 IVECARFDNYFDQQMNELE 135
>gi|402074916|gb|EJT70387.1| signal recognition particle receptor subunit alpha [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 683
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 183/317 (57%), Gaps = 54/317 (17%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------------------- 352
+F+++ G L K DL+ A+K ++D L+ KNVA
Sbjct: 370 LFRNVIGGKVLTKEDLDKAMKGMEDHLLRKNVAREAAVRLCEGVEKELVGVKTGNFESIS 429
Query: 353 -----AMEEALVRILTPRRSIDILRDVHAAK-------EQRKPYVVVFVGVNGVGKSTNL 400
AME +L ++LTP S+D+LR++ + + +PYV+ VGVNGVGKSTNL
Sbjct: 430 TRVQAAMEASLTKMLTPTSSLDLLREIDSVTAPPATSLRRARPYVMSIVGVNGVGKSTNL 489
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEKDPA 451
+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L +V +++KGY KD A
Sbjct: 490 SKICFFLLQNKYKVLIAAGDTFRSGAVEQLAVHVRNLKELTAREGGRVELYQKGYGKDAA 549
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VAK+A+ A G DVVL+DTAGR +++ LM +L K PD +L VGEALVG D+
Sbjct: 550 AVAKDAVSFAAHEGFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPDKILMVGEALVGTDS 609
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FN + + +DG +++K DT+ VG +S+V+ + PV+FVG GQ
Sbjct: 610 VAQARNFNAAFG------SGRTLDGFIISKCDTVGSMVGTLVSIVHATNVPVLFVGVGQH 663
Query: 572 YTDLKKLNVKSIVKTLL 588
Y+DL+ +VK V+ LL
Sbjct: 664 YSDLRNFSVKWAVEKLL 680
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 1 MLEQLLIFTRGGLILW--TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA-- 56
ML+ I T G++LW T + +A+ I+ I +EE++ AS +S+ AA
Sbjct: 1 MLDTFEILTTSGVVLWSRTLTPVSSAV----INGFISDVFIEEKASHASAARESSLAAAN 56
Query: 57 -------YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRT----- 104
+TL+W F +LGL+FVAVY+ +L+L +V L+ ++ F +Y + T
Sbjct: 57 APYRTDSHTLRWAFAKDLGLIFVAVYRSLLNLPWVARLVDNIRAIFVNLYGDQLTRPHTT 116
Query: 105 --DYSDFDEMFRQLRKEAEARAEELKK 129
+ FDE F Q KE E A + +
Sbjct: 117 LVECRGFDEYFDQQIKELEGAASDASR 143
>gi|57640588|ref|YP_183066.1| signal recognition particle GTPase [Thermococcus kodakarensis KOD1]
gi|57158912|dbj|BAD84842.1| signal recognition particle GTPase [Thermococcus kodakarensis KOD1]
Length = 342
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 158/236 (66%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA++ ILTP + ID+L+ + + ++ KP+V+ FVG NG GK+T +AK+A+WL ++
Sbjct: 117 ALKEAILEILTPEKKIDLLQMIKSKED--KPFVIAFVGFNGSGKTTTIAKLAHWLKKNGF 174
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 175 SVVIAASDTFRAGAIEQLEEHAKRVGVKVIKHDYGADPAAVAYDAIQHAKARGIDVVLID 234
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + PDLV+FVG++L GN V+Q +FN+ +
Sbjct: 235 TAGRNELNRNLMDEMKKIARVTKPDLVIFVGDSLGGNAVVEQAKQFNEAVR--------- 285
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DL+ + K V+ +
Sbjct: 286 -IDGVILTKLDA-DARGGAALSISHAIGAPILFVGVGQGYEDLRPFDEKWFVERIF 339
>gi|401841938|gb|EJT44245.1| SRP101-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 621
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 190/358 (53%), Gaps = 75/358 (20%)
Query: 297 SEEDEEVGKHNKPDAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA 352
S +DE + ++ ++K +G+ ++ F + + G + + DL+ L LK +L+TKNVA
Sbjct: 272 SHKDEII---SEKESKNSGYVNTAFGFLQKHVLGNKTISENDLKTVLDKLKQQLITKNVA 328
Query: 353 --------------------------------AMEEALVRILTPRRSIDILRDVHAAKEQ 380
++ +AL +ILTP S+D+LR++ + + +
Sbjct: 329 PEAADYLIQQVSRDLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSK 388
Query: 381 RK------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
+ PYV VGVNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H
Sbjct: 389 KDSEGKSDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHV 448
Query: 435 RRL----------------------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVL 470
L V +FE GY + +AK+AI+ + D+VL
Sbjct: 449 ENLAQLMDDSHVRGVKNKRGKSGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVL 508
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR ++ LM L PD ++ VGEALVG D+V Q FN
Sbjct: 509 MDTAGRRHNDPTLMSPLKSFADQAQPDKIIMVGEALVGTDSVQQAKNFNDAFG------K 562
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ +D +++K DT+ + +G ++MVY +G P++FVG GQ+YTDL+ L+VK V TL+
Sbjct: 563 GRNLDFFIISKCDTVGEMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 620
>gi|409095631|ref|ZP_11215655.1| cell division protein FtsY [Thermococcus zilligii AN1]
Length = 329
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 155/236 (65%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA++ +LTP R ID+ + + +E KP+V+ FVG NG GK+T +AK+A+WL +
Sbjct: 104 AVKEAVLEVLTPPRKIDLPEMIRSKEE--KPFVIAFVGFNGGGKTTTIAKLAHWLKKQGF 161
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 162 SVVVAASDTFRAGAIEQLEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLID 221
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG++L GN ++Q +FN+ +
Sbjct: 222 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNSIIEQARQFNEAVR--------- 272
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DLK + K V +
Sbjct: 273 -IDGVILTKLDA-DSRGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVDLIF 326
>gi|337284004|ref|YP_004623478.1| signal recognition particle receptor [Pyrococcus yayanosii CH1]
gi|334899938|gb|AEH24206.1| signal recognition particle receptor [Pyrococcus yayanosii CH1]
Length = 322
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/258 (43%), Positives = 165/258 (63%), Gaps = 25/258 (9%)
Query: 342 LKDRLMTKNV-----------AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVG 390
+K+RL+ K V A++EA++ IL P R +D+L ++ K+ KPYV++FVG
Sbjct: 74 IKERLVGKKVRIGTDKAKVIEEAVKEAVLEILRPEREVDLLEEI---KKSEKPYVILFVG 130
Query: 391 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 450
NG GK+T +AK+A+WL ++ +SV++AA DTFR+GA+EQL HARR+ V + + Y DP
Sbjct: 131 FNGSGKTTTIAKLAHWLKKNGLSVVIAASDTFRAGAIEQLEEHARRVGVRVIKHDYGADP 190
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A VA +AIQ A G DVVL+DTAGR + N LM + K+ + P+LV+FVG+AL GN
Sbjct: 191 AAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMRKIARVTRPNLVIFVGDALAGNA 250
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
V+Q +FN+ + I G++LTK D D + GAALS+ +V AP++FVG GQ
Sbjct: 251 IVEQARQFNEAVR----------IGGVILTKLDA-DARGGAALSISHVINAPILFVGVGQ 299
Query: 571 SYTDLKKLNVKSIVKTLL 588
Y DL+ + K ++ +
Sbjct: 300 GYDDLRPFDEKWFIERIF 317
>gi|212223740|ref|YP_002306976.1| signal recognition particle GTPase [Thermococcus onnurineus NA1]
gi|212008697|gb|ACJ16079.1| signal recognition particle GTPase [Thermococcus onnurineus NA1]
Length = 301
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 157/236 (66%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EA++ +LTP + ID+L + + +E KP+V+ FVG NG GK+T +AK+A+WL ++ +
Sbjct: 76 AVREAVLEVLTPEKRIDLLEMIRSKEE--KPFVIAFVGFNGSGKTTTIAKLAHWLKKNGL 133
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + Y DPA VA +AI A G DVVL+D
Sbjct: 134 SVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIGHAKARGIDVVLID 193
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K++ + PDLV+FVG++L GN V+Q +FN+ +
Sbjct: 194 TAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFNEAVR--------- 244
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DLK + K V+ +
Sbjct: 245 -IDGVILTKLDA-DARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIF 298
>gi|366994668|ref|XP_003677098.1| hypothetical protein NCAS_0F02590 [Naumovozyma castellii CBS 4309]
gi|342302966|emb|CCC70743.1| hypothetical protein NCAS_0F02590 [Naumovozyma castellii CBS 4309]
Length = 610
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 204/402 (50%), Gaps = 83/402 (20%)
Query: 254 SPPESKLDFTDPAGGNGSNIEVEAADHGESMMDK-EEVFSSDSESEEDEEVGKHNKPDAK 312
+ PES D G E D GE ++ + +++ +S + + E+E ++ +
Sbjct: 224 ASPESNFDMEFDKNAFG-----ERTDKGEFLIKEIDDLLTSTATANENE-----SQTSST 273
Query: 313 KTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA---------------- 352
G+ +S +++ G + ++DL L LK +L+TKNVA
Sbjct: 274 SQGFVNSTMGFIQRNLIGNKTITESDLRSVLDKLKKKLITKNVAPEAADFLTEQVSNDLL 333
Query: 353 ----------------AMEEALVRILTPRRSIDILRDVHAAKEQR------KPYVVVFVG 390
++ +AL +ILTP S+D+L ++ ++ +PYV VG
Sbjct: 334 GSKTANWTSVEVTARASLTKALTQILTPGVSVDLLHEIQKKTGKKDNEGKAQPYVFSIVG 393
Query: 391 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ------------ 438
VNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L
Sbjct: 394 VNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDESHIRGSK 453
Query: 439 ----------VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
V +FE GY + +AK+AI+ A D+VL+DTAGR ++ LM
Sbjct: 454 NKRGKTGNDFVELFESGYGGSDLVTKIAKQAIKYAHDQEFDIVLMDTAGRRHNDPTLMSP 513
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L PD ++ VGEALVG D+V Q FN + + +D +++K DT+
Sbjct: 514 LKSFAEQAQPDKIIMVGEALVGTDSVQQAKNFNDAFGKVRN------LDFFIISKCDTVG 567
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ +G ++MVY +G P++FVG GQ+YTDL+ L+VK V TL+
Sbjct: 568 EMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 609
>gi|14520718|ref|NP_126193.1| signal recognition particle receptor [Pyrococcus abyssi GE5]
gi|5457934|emb|CAB49424.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54)
[Pyrococcus abyssi GE5]
gi|380741257|tpe|CCE69891.1| TPA: signal recognition particle receptor [Pyrococcus abyssi GE5]
Length = 322
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 156/236 (66%), Gaps = 14/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EA++ ILTP R ID+L ++ ++ KPYV++FVG NG GK+T +AK+A+WL ++
Sbjct: 96 AVREAILEILTPPRKIDLLEEI---RKSEKPYVILFVGFNGSGKTTTIAKLAHWLKKNGF 152
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 153 SVVIAASDTFRAGAIEQLEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLID 212
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + P+LV+FVG++L GN V+Q +FN +
Sbjct: 213 TAGRSETNRNLMDEMRKIARVTKPNLVVFVGDSLAGNAIVEQARQFNDAVK--------- 263
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ID ++LTK D D + GAALS+ +V+ AP++FVG GQ Y DL + K V+ +L
Sbjct: 264 -IDAVILTKLDA-DARGGAALSISHVTNAPILFVGIGQGYDDLMPFDEKWFVERIL 317
>gi|212374986|pdb|3DMD|B Chain B, Structures And Conformations In Solution Of The Signal
Recognition Particle Receptor From The Archaeon
Pyrococcus Furiosus
gi|212374987|pdb|3DMD|A Chain A, Structures And Conformations In Solution Of The Signal
Recognition Particle Receptor From The Archaeon
Pyrococcus Furiosus
gi|212374988|pdb|3DMD|C Chain C, Structures And Conformations In Solution Of The Signal
Recognition Particle Receptor From The Archaeon
Pyrococcus Furiosus
gi|213424254|pdb|3E70|C Chain C, Structures And Conformations In Solution Of The Signal
Recognition Particle Receptor From The Archaeon
Pyrococcus Furiosus
Length = 328
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 148/224 (66%), Gaps = 14/224 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA+ IL R ID++ ++ A+ KPYV++FVG NG GK+T +AK+A WL H
Sbjct: 102 AVKEAVSEILETSRRIDLIEEIRKAE---KPYVIMFVGFNGSGKTTTIAKLANWLKNHGF 158
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 159 SVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLID 218
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + P+LV+FVG+AL GN V+Q +FN+ +
Sbjct: 219 TAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVK--------- 269
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
IDGI+LTK D D + GAALS+ YV AP++FVG GQ Y DL+
Sbjct: 270 -IDGIILTKLDA-DARGGAALSISYVIDAPILFVGVGQGYDDLR 311
>gi|18978138|ref|NP_579495.1| signal recognition particle receptor [Pyrococcus furiosus DSM 3638]
gi|397652586|ref|YP_006493167.1| cell division protein FtsY [Pyrococcus furiosus COM1]
gi|18893939|gb|AAL81890.1| signal recognition particle receptor (dpa) [Pyrococcus furiosus DSM
3638]
gi|393190177|gb|AFN04875.1| cell division protein FtsY [Pyrococcus furiosus COM1]
Length = 322
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 148/224 (66%), Gaps = 14/224 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA+ IL R ID++ ++ A+ KPYV++FVG NG GK+T +AK+A WL H
Sbjct: 96 AVKEAVSEILETSRRIDLIEEIRKAE---KPYVIMFVGFNGSGKTTTIAKLANWLKNHGF 152
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 153 SVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLID 212
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + P+LV+FVG+AL GN V+Q +FN+ +
Sbjct: 213 TAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVK--------- 263
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
IDGI+LTK D D + GAALS+ YV AP++FVG GQ Y DL+
Sbjct: 264 -IDGIILTKLDA-DARGGAALSISYVIDAPILFVGVGQGYDDLR 305
>gi|385304923|gb|EIF48923.1| signal recognition particle receptor subunit alpha [Dekkera
bruxellensis AWRI1499]
Length = 268
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 151/237 (63%), Gaps = 17/237 (7%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQR-KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+E+ L+++LTP SID+L ++ + + PYV+ VGVNGVGKSTNL+K+AYW LQ+K
Sbjct: 36 CLEKQLIKLLTPNSSIDLLNEIERKRSKTDNPYVISVVGVNGVGKSTNLSKLAYWFLQNK 95
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRL--------QVPIFEKGYEKDPAI--VAKEAIQEA 461
V++ ACDTFRSGAVEQLRTH L Q+ +FE GY + +A AI+ A
Sbjct: 96 YRVLITACDTFRSGAVEQLRTHVNNLSKLSPDHDQIELFEGGYGGSNLVAKIATGAIKYA 155
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
NG D+VL+DTAGR ++ LM L+ NPD ++ VGEALVG D+V Q F++
Sbjct: 156 KENGFDIVLLDTAGRRHNDAHLMTPLASFARAANPDKIIMVGEALVGTDSVMQAKNFDKA 215
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
N L D +++K DT+ D +G+ ++MV+ +G P++FVG GQ+YTDL+
Sbjct: 216 FG-----ANRHL-DFFIISKCDTVGDMIGSMVNMVFATGIPILFVGTGQTYTDLRTF 266
>gi|365984947|ref|XP_003669306.1| hypothetical protein NDAI_0C04030 [Naumovozyma dairenensis CBS 421]
gi|343768074|emb|CCD24063.1| hypothetical protein NDAI_0C04030 [Naumovozyma dairenensis CBS 421]
Length = 611
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 177/333 (53%), Gaps = 68/333 (20%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------- 352
S + ++ G + +DL+ L LK +L+TKNVA
Sbjct: 284 SFLRRNFTGNKTISASDLKSVLDKLKQKLITKNVAPEAATFLVEQVSKDLVGTKTANWTS 343
Query: 353 -------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGKSTN 399
++ +AL +ILTP S+D+L ++ ++ +++PYV VGVNGVGKSTN
Sbjct: 344 VEITARKSLTKALTQILTPGVSVDLLHEIQKKTSVKDSEGKKQPYVFSIVGVNGVGKSTN 403
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ--------------------- 438
L+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L
Sbjct: 404 LSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDESHVRGSKNRRGKSGND 463
Query: 439 -VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
V +FE GY + +AK+AI+ A D+VL+DTAGR ++ LM L
Sbjct: 464 YVELFEAGYGGSDLVTKIAKQAIKYAHDQDFDIVLMDTAGRRHNDPTLMSPLKSFAEQAQ 523
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PD ++ VGEALVG D+V Q FN + + +D +++K DT+ + +G ++M
Sbjct: 524 PDKIIMVGEALVGTDSVQQAKNFNNAFGKVRN------LDFFIISKCDTVGEMLGTMVNM 577
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
VY +G P++FVG GQ+YTDL+ L++K V TL+
Sbjct: 578 VYATGIPILFVGVGQTYTDLRTLSIKWAVNTLM 610
>gi|444315325|ref|XP_004178320.1| hypothetical protein TBLA_0A10220 [Tetrapisispora blattae CBS 6284]
gi|387511359|emb|CCH58801.1| hypothetical protein TBLA_0A10220 [Tetrapisispora blattae CBS 6284]
Length = 614
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 218/437 (49%), Gaps = 100/437 (22%)
Query: 239 DPKKKITKKNRVWD--------DSPPESKLDFT----DPAGGNGSNIEV--------EAA 278
+ KK T R W ++ SKLDF+ DP+ N E
Sbjct: 190 EAKKTSTSGGRKWGRDGMMEEINTAEASKLDFSESDRDPSSNNSPTPEPIINKEQFGSRE 249
Query: 279 DHGESMMDK-EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIAGKANLDKA 333
+G+ ++ + +++ +S+ ++E++++ + +G+F S F + + G + +
Sbjct: 250 KNGDYLIKEIDDLLTSNKNNDEEKDINNN-------SGYFMSGFSFLQKHVIGNKIITEK 302
Query: 334 DLEPALKALKDRLMTKNVA--------------------------------AMEEALVRI 361
DL L LK +L++KNVA ++ +AL +I
Sbjct: 303 DLLSVLDKLKKQLISKNVAPEAANYLADQVSRDLVGSKTAIWTSVENTARESLTKALTQI 362
Query: 362 LTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
L P S+D+L ++ ++ +++PYV VGVNGVGKSTNL+K+A+WLLQ+ V+
Sbjct: 363 LMPNVSVDLLHEIQKKTSILDSEGKKQPYVFSVVGVNGVGKSTNLSKLAFWLLQNNQKVL 422
Query: 416 MAACDTFRSGAVEQLRTHARRLQ----------------------VPIFEKGYEKDPAI- 452
+ ACDTFRSGAVEQLR H L V +FE GY +
Sbjct: 423 IVACDTFRSGAVEQLRVHVENLAQLTDESHVRGSKNKRGKSGNDFVELFEAGYGGSDLVT 482
Query: 453 -VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+AK+AI+ A G D+VL+DTAGR ++ LM L PD ++ VGEALVG D+
Sbjct: 483 KIAKQAIKYAKDTGFDIVLMDTAGRRHNDATLMSPLKAFAEQAKPDKIIMVGEALVGTDS 542
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V Q FN + +D +++K DT+ + +G ++MVY +G P++FVG GQ+
Sbjct: 543 VQQAKNFNDAFGKARN------LDFFIISKCDTVGEMLGTMVNMVYATGIPILFVGVGQT 596
Query: 572 YTDLKKLNVKSIVKTLL 588
YTDL+ L+VK V TL+
Sbjct: 597 YTDLRTLSVKWAVNTLM 613
>gi|14591436|ref|NP_143516.1| signal recognition particle protein [Pyrococcus horikoshii OT3]
gi|3258098|dbj|BAA30781.1| 326aa long hypothetical signal recognition particle protein
[Pyrococcus horikoshii OT3]
Length = 326
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 157/236 (66%), Gaps = 14/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +A++ ILTP + +D+L ++ K+ KPYV++FVG NG GK+T +AK+A+WL ++
Sbjct: 100 AVRKAVLEILTPEKKMDLLEEI---KKAEKPYVILFVGFNGSGKTTTIAKLAHWLKKNGF 156
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+++ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 157 SVVIAASDTFRAGAIEQLEEHAKKVGVKVIKHKYGADPAAVAYDAIQHAKARGIDVVLID 216
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + P+LV+FVG++L GN V+Q +FNQ +
Sbjct: 217 TAGRSETNRNLMDEMKKIARVTKPNLVIFVGDSLAGNAIVEQARQFNQAVK--------- 267
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ +V AP++FVG GQ Y DL + + V+ +L
Sbjct: 268 -IDGVILTKLDA-DARGGAALSISHVINAPILFVGIGQGYEDLIPFDERWFVEKIL 321
>gi|332157901|ref|YP_004423180.1| signal recognition particle protein [Pyrococcus sp. NA2]
gi|331033364|gb|AEC51176.1| signal recognition particle protein [Pyrococcus sp. NA2]
Length = 322
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 156/236 (66%), Gaps = 14/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +A++ IL P R ID++ ++ K+ KPYV++FVG NG GK+T +AK+A+WL ++
Sbjct: 96 AVRDAVLEILRPPRKIDLIEEI---KKAEKPYVILFVGFNGSGKTTTIAKLAHWLKKNGF 152
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 153 SVVIAASDTFRAGAIEQIEEHAKRIGVKVIKHKYGADPAAVAYDAIQHAKARGIDVVLID 212
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + P+LV+FVG+AL GN ++Q +FN+ +
Sbjct: 213 TAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIIEQAREFNEAVK--------- 263
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + G+ALS+ Y + AP++FVG GQ Y DL + + V+ +L
Sbjct: 264 -IDGVILTKLDA-DARGGSALSVTYATNAPILFVGIGQGYDDLIPFDERWFVERIL 317
>gi|242398400|ref|YP_002993824.1| Signal recognition particle GTPase [Thermococcus sibiricus MM 739]
gi|242264793|gb|ACS89475.1| Signal recognition particle GTPase [Thermococcus sibiricus MM 739]
Length = 300
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 158/236 (66%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +A++ +LTP R ID+L + + +E KP+V+VFVG NG GK+T +AK+A WL ++ +
Sbjct: 76 AVRDAVLEVLTPERHIDLLEMIKSKEE--KPFVIVFVGFNGGGKTTTIAKLANWLKKNGL 133
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQ+ HA+R+ V + + GY+ DPA VA ++I+ A G DVVLVD
Sbjct: 134 SVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHGYKSDPAAVAYDSIEHAKARGIDVVLVD 193
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + PDLV+FVG++L GN ++Q +FN+ +
Sbjct: 194 TAGRNELNRNLMDEMKKIARVTKPDLVIFVGDSLAGNAILEQARQFNEAVK--------- 244
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + G ALS+ + GAP++FVG GQ Y DL + K I++ +
Sbjct: 245 -IDGVILTKLDA-DARGGTALSVSHAIGAPILFVGIGQGYDDLIPFDEKWILEKIF 298
>gi|54299348|ref|NP_982463.2| AAL079Cp [Ashbya gossypii ATCC 10895]
gi|51890935|gb|AAS50287.2| AAL079Cp [Ashbya gossypii ATCC 10895]
gi|374105662|gb|AEY94573.1| FAAL079Cp [Ashbya gossypii FDAG1]
Length = 586
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 168/324 (51%), Gaps = 67/324 (20%)
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G +D+ DL L+ K L+ KNVA A
Sbjct: 268 GNKTIDEGDLHAILEKFKKHLIGKNVAPAAADYLTSRVSEQLVGLKTASWTSVEQTARDA 327
Query: 354 MEEALVRILTPRRSIDILRDVHA-----AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
+E+AL+ ILTP S+D+L ++ + PYV VGVNGVGKSTNL+K+A+WLL
Sbjct: 328 LEQALISILTPGVSVDLLHEIQKKVGNKVDAKCDPYVFSIVGVNGVGKSTNLSKLAFWLL 387
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKGY 446
Q+K V++ ACDTFRSGAVEQLR H L V +FE GY
Sbjct: 388 QNKFKVLIVACDTFRSGAVEQLRVHVENLAQLTDDNHVRGSKNKRGKSGNDAVELFEAGY 447
Query: 447 EKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
+ +AK+AI+ A DVVL+DTAGR ++ LM L PD ++ VGE
Sbjct: 448 GGSDLVTKIAKQAIKYAREQQFDVVLMDTAGRRHNDATLMSPLKSFADQAKPDKIIMVGE 507
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
ALVG D+V Q FNQ + +D +++K DT+ + +G ++MVY +G P++
Sbjct: 508 ALVGTDSVQQAKNFNQAFG------KDRNLDFFIISKCDTVGEMLGTMVNMVYATGIPIL 561
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
F+G GQ+YTDL+ L+V V +LL
Sbjct: 562 FIGVGQTYTDLRTLSVTWAVNSLL 585
>gi|254586281|ref|XP_002498708.1| ZYRO0G16720p [Zygosaccharomyces rouxii]
gi|238941602|emb|CAR29775.1| ZYRO0G16720p [Zygosaccharomyces rouxii]
Length = 605
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 204/399 (51%), Gaps = 84/399 (21%)
Query: 260 LDFTD---PAGGNGSNIEVEA----ADHGESMMDK-EEVFSSDSESEEDEEVGKHNKPDA 311
LDF++ AGG+ I+ ++ + G+ ++ + +++ S+ ES + E
Sbjct: 220 LDFSENNQQAGGSMGQIDKDSFGKRTNQGDFLIKEIDDLLSAQKESYQSNE--------D 271
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------- 352
K T F + + + G + + DL+ L LK +L+TKNVA
Sbjct: 272 KGTSAFGFLRKHLLGNKTITETDLKSVLDKLKQKLITKNVAPEAAEFLCKQVSLDLVGSK 331
Query: 353 -------------AMEEALVRILTPRRSIDILRDVHAAKEQR------KPYVVVFVGVNG 393
++ ++L +ILTP S+D+L ++ E R +PYV VGVNG
Sbjct: 332 TASWTSVENTARESLTKSLTQILTPGVSVDLLHEIQQKAETRDAQGLKQPYVFSVVGVNG 391
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------------- 437
VGKSTNL+K+A+WLLQ+ + V++ A DTFRSGAVEQLR H L
Sbjct: 392 VGKSTNLSKLAFWLLQNNLRVLVVASDTFRSGAVEQLRVHVENLAELTDESHIRGSKNRR 451
Query: 438 ------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
V +FE GY + +AK+AI+ A D+VL+DTAGR ++ LM L
Sbjct: 452 DKTGNDHVELFEAGYGGSDLVTKIAKQAIKYAKEQEFDIVLMDTAGRRHNDPTLMSPLKS 511
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
PD ++ VGEALVG D+V Q FN+ + + +D +++K DT+ + +
Sbjct: 512 FAEQAKPDKIIMVGEALVGTDSVQQAKNFNEAFGRVRN------LDFFIISKCDTVGEML 565
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G ++MVY +G P++FVG GQ+YTDL+ L+V V L+
Sbjct: 566 GTMVNMVYATGIPILFVGVGQTYTDLRVLSVNWAVNILV 604
>gi|212374985|pdb|3DM9|B Chain B, Structures And Conformations In Solution Of The Signal
Recognition Particle Receptor From The Archaeon
Pyrococcus Furiosus
Length = 328
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/224 (47%), Positives = 145/224 (64%), Gaps = 14/224 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA+ IL R ID++ ++ A+ KPYV+ FVG NG GK+T +AK+A WL H
Sbjct: 102 AVKEAVSEILETSRRIDLIEEIRKAE---KPYVIXFVGFNGSGKTTTIAKLANWLKNHGF 158
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 159 SVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLID 218
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N L K+ + P+LV+FVG+AL GN V+Q +FN+ +
Sbjct: 219 TAGRSETNRNLXDEXKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVK--------- 269
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
IDGI+LTK D D + GAALS+ YV AP++FVG GQ Y DL+
Sbjct: 270 -IDGIILTKLDA-DARGGAALSISYVIDAPILFVGVGQGYDDLR 311
>gi|341581506|ref|YP_004761998.1| cell division protein FtsY [Thermococcus sp. 4557]
gi|340809164|gb|AEK72321.1| cell division protein FtsY [Thermococcus sp. 4557]
Length = 327
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 153/232 (65%), Gaps = 13/232 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EA++ +LTP + ID+L + + +E KP+V+ FVG NG GK+T +AK+A WL ++ +
Sbjct: 102 ALREAVLDVLTPEKKIDLLELIKSKEE--KPFVIAFVGFNGSGKTTTIAKLANWLKKNGL 159
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V++AA DTFR+GA+EQ+ HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 160 GVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIQHAKARGLDVVLID 219
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + PDLV+FVG++L GN V+Q +FN+ +
Sbjct: 220 TAGRNELNRNLMDEMKKIARVTKPDLVIFVGDSLGGNSVVEQAKQFNEAVK--------- 270
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
IDG++LTK D D + GAALS+ + GAP++FVG GQ Y DL+ + K V
Sbjct: 271 -IDGVILTKLDA-DARGGAALSISHAIGAPILFVGVGQGYDDLRPFDEKWFV 320
>gi|50305435|ref|XP_452677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641810|emb|CAH01528.1| KLLA0C10714p [Kluyveromyces lactis]
Length = 600
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 193/373 (51%), Gaps = 78/373 (20%)
Query: 279 DHGESMMDK-EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEP 337
D GE ++++ +E+ +S+ E +K + FS + + I G + + DL+
Sbjct: 242 DKGEFLINEIDELLASNKEK---------SKAKPTTSSPFSFLQKHILGNKTISEEDLKT 292
Query: 338 ALKALKDRLMTKNVA--------------------------------AMEEALVRILTPR 365
L +LK +L++KNVA ++++ L ILTP
Sbjct: 293 VLDSLKQKLISKNVAPEVADHLCNQVSKDLIGSKTENWTSVDQTARESLQKCLSSILTPS 352
Query: 366 RSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAAC 419
S+D+L ++ ++ PYV VGVNGVGKSTNL+K+A+WLL++ + V++ AC
Sbjct: 353 VSVDLLHEIQKRINKKDSSGLNDPYVFSVVGVNGVGKSTNLSKLAFWLLKNNLKVLIVAC 412
Query: 420 DTFRSGAVEQLRTHARRLQ----------------------VPIFEKGYEKDPAI--VAK 455
DTFRSGAVEQLR H L V +FE GY + +AK
Sbjct: 413 DTFRSGAVEQLRVHVENLAQLTDHNHVRGTKNRRGKTGNEYVELFEGGYGGSNLVTKIAK 472
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
+AI+ A DVVL+DTAGR ++ LM L NPD ++ VGEALVG D+V Q
Sbjct: 473 QAIKYAKTEHFDVVLMDTAGRRHNDATLMSPLKSFAEQANPDKIIMVGEALVGTDSVQQA 532
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
FNQ + +D +++K DT+ + +G ++MVY + P++F+G GQ+YTDL
Sbjct: 533 HNFNQAFG------KERNLDFFIISKCDTVGELLGTMVNMVYATSIPILFIGVGQTYTDL 586
Query: 576 KKLNVKSIVKTLL 588
+ L+V+ V +LL
Sbjct: 587 RTLSVEWAVNSLL 599
>gi|389852968|ref|YP_006355202.1| signal recognition particle receptor [Pyrococcus sp. ST04]
gi|388250274|gb|AFK23127.1| signal recognition particle receptor [Pyrococcus sp. ST04]
Length = 322
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 149/223 (66%), Gaps = 14/223 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++EA+ IL + ID+L ++ K KPYV++FVG NG GK+T +AK+A+WL ++ +
Sbjct: 96 AVKEAVSEILETSKRIDLLEEI---KRSEKPYVIMFVGFNGSGKTTTIAKLAHWLKKNGL 152
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + + Y DPA VA +AIQ A G DVVL+D
Sbjct: 153 SVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHKYGADPAAVAYDAIQHAKARGIDVVLID 212
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + N LM + K+ + P+LV+FVG+AL GN V+Q +FN+ +
Sbjct: 213 TAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVK--------- 263
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
IDG++LTK D D + GAALS+ +V AP++FVG GQ Y DL
Sbjct: 264 -IDGVILTKLDA-DARGGAALSISHVIDAPILFVGVGQGYDDL 304
>gi|387593095|gb|EIJ88119.1| hypothetical protein NEQG_01563 [Nematocida parisii ERTm3]
gi|387596193|gb|EIJ93815.1| hypothetical protein NEPG_01387 [Nematocida parisii ERTm1]
Length = 441
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 196/351 (55%), Gaps = 51/351 (14%)
Query: 274 EVEAADHGESMMDK----EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKAN 329
E+ + G+S +K EE++ SD E EE K KP ++F+ GK
Sbjct: 103 EIVGEEAGDSTTEKADAAEEIYDSDPE-EETTGWDKWKKP--------RNIFRLFTGKKE 153
Query: 330 LDKADLEPAL----------KALKDRLMT-----KNVAAMEEA-------------LVRI 361
++++ ++ L + + + +MT K+ M E +V
Sbjct: 154 VNESGIQDHLLSRNIPHLLSRKIANDIMTTMKNDKSNKGMGETDQMRHCFKKVISEIVPT 213
Query: 362 LTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDT 421
L+P + I+ + +VH K + PYV VGVNGVGKST L+K+ W+L++K + +AACD
Sbjct: 214 LSPGKIIEEI-EVHK-KNSKGPYVFCMVGVNGVGKSTTLSKLCLWILKNKYKICVAACDG 271
Query: 422 FRSGAVEQLRTHARRLQ-----VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGR 476
FRSGA+EQL+ + R Q + ++EKGY+KD A +A +AI A N DVVL+DT GR
Sbjct: 272 FRSGAIEQLKKYVERFQARGHSIVLYEKGYKKDEASIASKAISYAKENKFDVVLIDTCGR 331
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDG 536
M N M +LSKLI +N P+ + +VGEALVGND++ Q+ FN+ + + + IDG
Sbjct: 332 MPGNAQSMLSLSKLIRVNKPNKIFYVGEALVGNDSIQQIKGFNE---SIERACVDKTIDG 388
Query: 537 ILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
I++TK DT+D+K+G +S+ + PV+F+G GQ DL ++ ++ + L
Sbjct: 389 IVVTKCDTVDEKIGTIVSLAHTVDKPVVFIGVGQKNVDLLPFDIDNLCEAL 439
>gi|161527904|ref|YP_001581730.1| signal recognition particle-docking protein FtsY [Nitrosopumilus
maritimus SCM1]
gi|160339205|gb|ABX12292.1| signal recognition particle-docking protein FtsY [Nitrosopumilus
maritimus SCM1]
Length = 513
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 165/261 (63%), Gaps = 22/261 (8%)
Query: 328 ANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 387
+ +DK ++E K +KD L++ A + A ID+ ++ KEQ +P++++
Sbjct: 61 SKVDKKEIE---KFVKDSLISSISAHFDAA--------GEIDLFGKINEKKEQGQPFLIL 109
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
F+G+NG GK+T+LAKVA+ L Q K SV++AA DTFR+GA+EQLR H RL + + + Y
Sbjct: 110 FLGINGTGKTTSLAKVAHMLQQEKYSVVVAAADTFRAGAIEQLREHTNRLNLKLVAQNYN 169
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
DPA VA++A+ A + +DVVL+DTAGRMQ +E LM+ + K+ + NPDL +FVG++L
Sbjct: 170 SDPAAVARDAVLYAKSHKTDVVLIDTAGRMQTSENLMQQIEKITKVVNPDLKIFVGDSLA 229
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GND V+Q +F+ G +LTK D D + GAALS+V V+ PVM+VG
Sbjct: 230 GNDTVNQAREFHAHTN----------FHGSILTKSDA-DARGGAALSIVKVTSTPVMYVG 278
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
GQ Y DLK + K+ ++T+
Sbjct: 279 VGQEYPDLKPFDKKTFLETVF 299
>gi|363750558|ref|XP_003645496.1| hypothetical protein Ecym_3179 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889130|gb|AET38679.1| Hypothetical protein Ecym_3179 [Eremothecium cymbalariae
DBVPG#7215]
Length = 593
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 207/421 (49%), Gaps = 91/421 (21%)
Query: 247 KNRVW-------DDSPPESK-LDFTDPAGGNGSNIEVEAADH---------GESMMDKEE 289
K+R W DD+ ES LDF+ PA + + ++ A D GE ++ + +
Sbjct: 184 KSRKWGANGMIDDDAMAESSALDFS-PASMSNTASDLAAVDTEGFGTRTKTGEFLIKQID 242
Query: 290 VFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTK 349
S++++ E K ++ A F + + G + ++DL L LK +L+ K
Sbjct: 243 DLLVQSKNDQMENQQKKSQGRA-----FDFLQKHWLGNKTITESDLSLILDKLKKQLIAK 297
Query: 350 NVA--------------------------------AMEEALVRILTPRRSIDILRDVHAA 377
NV ++ +L +LTP S+D+L ++
Sbjct: 298 NVTPTVADYLAAQVSQNLVGSKTANWTSVENTARESLGTSLTNLLTPSVSVDLLHEIQRK 357
Query: 378 KEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLR 431
E R PYV VGVNGVGKSTNL+K+A+WLLQ+ + V++ ACDTFRSGAVEQLR
Sbjct: 358 AEDRDKDGNKNPYVFSIVGVNGVGKSTNLSKLAFWLLQNHLKVLIVACDTFRSGAVEQLR 417
Query: 432 THARRLQ----------------------VPIFEKGYEKDPAI--VAKEAIQEATRNGSD 467
H L + +FE GY + AK+AI+ A D
Sbjct: 418 VHVENLAQLIDEDHVRGSKNERGKTGNDFIELFEAGYGGSDLVTKTAKKAIKYAREQAFD 477
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVL+DTAGR ++ LM L PD ++ VGEALVG D+V Q FNQ ++
Sbjct: 478 VVLMDTAGRRHNDATLMSPLKSFAEQAKPDKIIMVGEALVGTDSVQQARSFNQVFGKGTT 537
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
+D +++K DT+ D +G ++MVY +G P++FVG GQ+YTDL+ L+V V+TL
Sbjct: 538 ------LDFFIISKCDTVGDMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVPWAVETL 591
Query: 588 L 588
L
Sbjct: 592 L 592
>gi|50288847|ref|XP_446853.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526162|emb|CAG59786.1| unnamed protein product [Candida glabrata]
Length = 605
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 176/341 (51%), Gaps = 72/341 (21%)
Query: 314 TGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA----------------- 352
TG+ S F + + G + + D+ L+ K +L+TKNV+
Sbjct: 270 TGYTKSAFGFLQKHLLGNKTITEKDIHEVLEKFKQKLITKNVSPEAADYLLKQVSRDLVG 329
Query: 353 ---------------AMEEALVRILTPRRSIDILRDVH------AAKEQRKPYVVVFVGV 391
A+ ++L +LTP S+D+L ++ +A ++ PYV VGV
Sbjct: 330 SRTDNWTSVENTVKQAVSKSLTEVLTPGVSVDLLHEIQKKTGNRSADGKKNPYVFSVVGV 389
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL-------------- 437
NGVGKSTNL+K+A+WLLQ+ +++ ACDTFRSGAVEQLR H L
Sbjct: 390 NGVGKSTNLSKLAFWLLQNNFRILIVACDTFRSGAVEQLRVHVENLAQLMDEKHIRGSKN 449
Query: 438 --------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
+ +FE GY + +AK+AI+ A D+VL+DTAGR ++ LM L
Sbjct: 450 SRGKSGNDYIELFEAGYGGSDLVTKIAKQAIKYAKEQDFDIVLMDTAGRRHNDPTLMSPL 509
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
NPD ++ VGEALVG D+V Q FN + +D +++K DT+ +
Sbjct: 510 KNFAEQANPDKIIMVGEALVGTDSVQQARNFNNAFG------KNRNLDFFIISKCDTVGE 563
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G ++MVY +G P++FVG GQ+YTDL+ L+V V TL+
Sbjct: 564 MLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVNWAVNTLM 604
>gi|38047671|gb|AAR09738.1| similar to Drosophila melanogaster Gtp-bp, partial [Drosophila
yakuba]
Length = 126
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 110/123 (89%)
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+AVDQL KFNQ LAD S
Sbjct: 4 DVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYS 63
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
S+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +NV ++V +
Sbjct: 64 SNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNS 123
Query: 587 LLK 589
L+K
Sbjct: 124 LMK 126
>gi|410079699|ref|XP_003957430.1| hypothetical protein KAFR_0E01410 [Kazachstania africana CBS 2517]
gi|372464016|emb|CCF58295.1| hypothetical protein KAFR_0E01410 [Kazachstania africana CBS 2517]
Length = 595
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 203/400 (50%), Gaps = 78/400 (19%)
Query: 252 DDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDK-EEVFSSDSESEEDEEVGKHNKPD 310
+DS P K D + GS ++ GE ++ + +++ ++ E+ ++E K+ +
Sbjct: 210 EDSQPTYKNDLSIDKKSFGSR-----SEKGEFLIKEIDDLLANQKETSGNKETEKNTYVN 264
Query: 311 AKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------ 352
F + + + G + + DL L L+ +L++KNVA
Sbjct: 265 NA----FGFLQKHLLGNKTITENDLTSVLNKLRKQLISKNVAPEAADYLTDQVKSDLIGS 320
Query: 353 --------------AMEEALVRILTPRRSIDILRDVH---AAKE---QRKPYVVVFVGVN 392
++ +AL ILTP S+D+L ++ AK+ +++PYV VGVN
Sbjct: 321 KTANWTTLENTTKESLSKALTEILTPGVSVDLLHEIQKKIGAKDSDGKKQPYVFSVVGVN 380
Query: 393 GVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL--------------- 437
GVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L
Sbjct: 381 GVGKSTNLSKLAFWLLQNNFRVLIVACDTFRSGAVEQLRVHVENLAELMDESHVRGSKNR 440
Query: 438 -------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
V +FE GY + +AK+AI+ A D+VL+DTAGR ++ LM L
Sbjct: 441 RGKSGNDYVELFEAGYGGSDLVTKIAKQAIKYARDEDFDIVLMDTAGRRHNDPTLMSPLK 500
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
PD ++ VGEALVG D+V Q + FN + + +D +++K DT+ D
Sbjct: 501 SFAEQAKPDKIIMVGEALVGTDSVQQATNFNNAFGRVRN------LDFFIISKCDTVGDM 554
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G ++MVY + P++FVG GQ+YTDL+ L+V V L+
Sbjct: 555 LGTMVNMVYATSIPILFVGVGQTYTDLRTLSVNWAVNKLM 594
>gi|405960202|gb|EKC26143.1| Signal recognition particle receptor subunit alpha [Crassostrea
gigas]
Length = 546
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 134/216 (62%), Gaps = 45/216 (20%)
Query: 319 SMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-------------------------- 352
SMF+++ G L + DL+PAL+ ++D L+ KNVA
Sbjct: 328 SMFKNLVGSKTLTREDLQPALEKMRDHLIAKNVAGDIAMKLCDSVGAKLEGKVLGTFSTI 387
Query: 353 ------AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+EEA V++L P+R IDILRD AK++ +P+V+ F GVNGVGKSTNLAK+ +W
Sbjct: 388 SNTVKKTLEEACVQLLVPKRRIDILRDAMEAKQKNRPFVITFCGVNGVGKSTNLAKICFW 447
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIV 453
L+++ V++AACDTFR+GAVEQLRTH R+L V ++EKGY KD A +
Sbjct: 448 LVENNFRVLIAACDTFRAGAVEQLRTHTRKLNALHPPEAHSGQTMVKLYEKGYGKDAAGI 507
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
A EAI A DVVLVDTAGRMQDNEPLM+ALSK
Sbjct: 508 ALEAINSARDLRFDVVLVDTAGRMQDNEPLMKALSK 543
>gi|407464254|ref|YP_006775136.1| signal recognition particle-docking protein FtsY [Candidatus
Nitrosopumilus sp. AR2]
gi|407047442|gb|AFS82194.1| signal recognition particle-docking protein FtsY [Candidatus
Nitrosopumilus sp. AR2]
Length = 473
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 167/261 (63%), Gaps = 22/261 (8%)
Query: 328 ANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 387
+ +DK ++E K +KD L++ ++ ++ D+ ++ K+Q +P++++
Sbjct: 61 SKVDKKEIE---KFVKDSLIS--------SISKLFDEAGEYDLFEKINEKKKQGQPFLIL 109
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
FVG+NG GK+T+LAKVA+ L + K S+++AA DTFR+GA+EQL+ HA RL + + + Y
Sbjct: 110 FVGINGTGKTTSLAKVAHMLKEAKYSIVIAAADTFRAGAIEQLKEHANRLNLKLVAQNYN 169
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
DPA VA++A+ A + +D VL+DTAGRMQ +E LM+ + K+ + NPD+ +FVG++L
Sbjct: 170 SDPAAVARDAVLYAKSHKTDCVLIDTAGRMQTSENLMQQIEKITKVVNPDMKIFVGDSLA 229
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GND V+Q +F++ + DG +LTK D D + GAALS+V V+ PV++VG
Sbjct: 230 GNDTVNQAREFHEHVK----------FDGSILTKSDA-DARGGAALSIVKVTSTPVLYVG 278
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
GQ Y DLK + + ++T+
Sbjct: 279 VGQEYPDLKPFDKELFLETVF 299
>gi|241650810|ref|XP_002410250.1| signal recognition particle receptor, alpha subunit, putative
[Ixodes scapularis]
gi|215501564|gb|EEC11058.1| signal recognition particle receptor, alpha subunit, putative
[Ixodes scapularis]
Length = 145
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 108/123 (87%)
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVL+DTAGRMQDNEPLMRAL+KLI +N+PDLVLFVGEALVGN+AVDQL KFNQ LAD S
Sbjct: 23 DVVLIDTAGRMQDNEPLMRALAKLITVNSPDLVLFVGEALVGNEAVDQLVKFNQALADHS 82
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
S NP LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y DLK +N K++V
Sbjct: 83 SQENPHLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYIDLKTINAKAVVHA 142
Query: 587 LLK 589
L+K
Sbjct: 143 LMK 145
>gi|403218511|emb|CCK73001.1| hypothetical protein KNAG_0M01480 [Kazachstania naganishii CBS
8797]
Length = 602
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 170/334 (50%), Gaps = 68/334 (20%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
F + + G + + DL L LK +L+TKNVA
Sbjct: 274 FGFLQKHFLGNKTITEQDLVSVLDKLKQQLVTKNVAPEAADYLTAQVKRDILGSKTANWT 333
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA------AKEQRKPYVVVFVGVNGVGKST 398
++ +AL ILTP S+D+L ++ ++ ++ PYV VGVNGVGKST
Sbjct: 334 TVEDTARESLTKALTEILTPGVSVDLLHEIQKKTGKTDSEGKKSPYVFSVVGVNGVGKST 393
Query: 399 NLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------------- 438
NL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L
Sbjct: 394 NLSKLAFWLLQNSFRVLIVACDTFRSGAVEQLRVHVENLAQLMDQSYVRGSRNKRGKTGN 453
Query: 439 --VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
V +FE GY + +AK+AI+ D++L+DTAGR ++ LM L
Sbjct: 454 DYVELFEAGYGGSDLVTKIAKQAIKYGHDYDFDIILMDTAGRRHNDPTLMSPLKSFAEQA 513
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
PD ++ VGEALVG D+V Q FN + + +D +++K DT+ +G ++
Sbjct: 514 KPDKIIMVGEALVGTDSVQQAKNFNDAFGKVRN------LDFFIISKCDTVGGMLGTMVN 567
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
MVY +G P++FVG GQ+YTDL+ L+V V TL+
Sbjct: 568 MVYATGIPILFVGVGQTYTDLRTLSVNWAVNTLM 601
>gi|118575528|ref|YP_875271.1| signal recognition particle GTPase [Cenarchaeum symbiosum A]
gi|118194049|gb|ABK76967.1| signal recognition particle GTPase [Cenarchaeum symbiosum A]
Length = 422
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 149/222 (67%), Gaps = 13/222 (5%)
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
++D+L + A K+ PY++VFVG+NG GK+T++AK+A+ L K+SV++AA DTFR+GA
Sbjct: 61 AVDLLERIRAKKDD--PYIIVFVGINGTGKTTSVAKIAHMLRDSKLSVVLAAADTFRAGA 118
Query: 427 VEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
+EQLR HA+RL + I + Y DPA VA++A+ A +G D VLVDTAGRMQ ++ LM
Sbjct: 119 IEQLREHAKRLNLKIVAQNYGSDPAAVARDAVLYARSHGVDCVLVDTAGRMQTSKNLMEQ 178
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
+ K+I + PDL +FVG++L GND V+Q +F++ + D +LTK D D
Sbjct: 179 IEKIIRVVQPDLKIFVGDSLAGNDTVNQAGEFHEHIK----------FDCSILTKNDA-D 227
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ GAALS+V + PV++VG GQ Y D++ + ++ ++T+
Sbjct: 228 ARGGAALSIVKTTSTPVIYVGTGQEYGDIRPFSKETFIETVF 269
>gi|261402774|ref|YP_003246998.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus vulcanius M7]
gi|261369767|gb|ACX72516.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus vulcanius M7]
Length = 377
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 149/239 (62%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A+ A+ IL+ ++ ID+ + A K + KP V+VFVG+NG GK+T +AK+AY L Q
Sbjct: 138 TINAIRTAIKNILSQKK-IDLEEIIKANKAKGKPTVIVFVGINGTGKTTTIAKLAYKLKQ 196
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ A G DVV
Sbjct: 197 KGYSVVLAAGDTFRAGAIEQLEQHAKNIGVKVIKHKQGADSAAVIYDAIQHAKARGIDVV 256
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDLV+FVG+AL GNDAV Q +FN+ +
Sbjct: 257 LADTAGRQATNANLMEEIKKVVRVTKPDLVIFVGDALTGNDAVYQAEEFNRAVN------ 310
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDGI+LTK D D K GAALS+ Y G P++++G GQ Y+DL + N +VK L
Sbjct: 311 ----IDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYSDLVEFNADWMVKKLF 364
>gi|378755667|gb|EHY65693.1| hypothetical protein NERG_01300 [Nematocida sp. 1 ERTm2]
Length = 440
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 150/236 (63%), Gaps = 12/236 (5%)
Query: 358 LVRILTPRRSIDILRDVHAAKEQRK-PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMM 416
+V L+P + I+ ++H+ K K PYV VGVNGVGKST L+K+ W+L++ + +
Sbjct: 209 IVPTLSPEK---IIEEIHSHKRNGKGPYVFCMVGVNGVGKSTTLSKLCLWILKNGFRICV 265
Query: 417 AACDTFRSGAVEQLRTHARRLQ-----VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
ACD FRSGA+EQL + R Q + ++EKGY+KD + +A +AI A ++G DVVL+
Sbjct: 266 GACDGFRSGAIEQLEKYVLRYQARGHAISLYEKGYKKDESSIAGKAIAHAQQHGFDVVLI 325
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DT GRM N M +LSKLI ++ P+ + +VGEALVGND+++Q+ FN+ + +
Sbjct: 326 DTCGRMPGNTQSMLSLSKLIRVSKPNKIFYVGEALVGNDSIEQIKGFNEYIERACVDKS- 384
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
IDGI++TK D +D+K+G + + + PV+F+G GQ DL ++ S+ + L
Sbjct: 385 --IDGIVVTKCDAVDEKIGTIVGLAHTVDKPVVFIGVGQKNVDLLPFDIDSLCEAL 438
>gi|340344259|ref|ZP_08667391.1| Signal recognition particle-docking protein FtsY [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519400|gb|EGP93123.1| Signal recognition particle-docking protein FtsY [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 460
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 169/261 (64%), Gaps = 22/261 (8%)
Query: 328 ANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 387
+ +DK ++E K +KDRL++ N++++ +A ++D+ ++ K+ +P++++
Sbjct: 61 SKVDKKEIE---KFVKDRLIS-NISSLFDA-------AGTVDLFELINEKKKTVQPFLIL 109
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
FVG+NG GK+T+LAKVAY L Q K SV++AA DTFR+GA+EQLR H RL + + + Y
Sbjct: 110 FVGINGTGKTTSLAKVAYMLQQAKYSVVVAAADTFRAGAIEQLREHTNRLNLKLVAQNYN 169
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
DPA VA++A+ A + D VL+DTAGRMQ ++ LM ++K+ + NPD +FVG++L
Sbjct: 170 SDPAAVARDAVLYAKSHKMDCVLIDTAGRMQTSKNLMEQIAKITKVVNPDFKIFVGDSLA 229
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
GND V+Q +F + + +G +LTK D D + GAALS+V ++ PV+++G
Sbjct: 230 GNDTVNQAREFFEHVK----------FNGSILTKSDA-DARGGAALSIVKITSTPVLYLG 278
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
GQ Y+DLK + + ++T+
Sbjct: 279 VGQEYSDLKPFDKELFLETVF 299
>gi|302419337|ref|XP_003007499.1| signal recognition particle receptor subunit alpha [Verticillium
albo-atrum VaMs.102]
gi|261353150|gb|EEY15578.1| signal recognition particle receptor subunit alpha [Verticillium
albo-atrum VaMs.102]
Length = 636
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 177/322 (54%), Gaps = 58/322 (18%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA------------------------ 352
+ +F+++ G L + DL A+K +++ L+ KNVA
Sbjct: 320 ITGLFRNVVGGKTLTQDDLNKAMKGMEEHLLKKNVAREAAVRLCEGVEKELLGVKTGNFE 379
Query: 353 --------AMEEALVRILTPRRSIDILRDVHA-------AKEQRKPYVVVFVGVNGVGKS 397
AME +L ++LTP S+D+LR++ A + +PYV+ VGVNGVGKS
Sbjct: 380 SINTRIQSAMEASLTKMLTPTSSLDLLREIDAITRPSAVSLRSARPYVMSIVGVNGVGKS 439
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---------QVPIFEKGYEK 448
TNL+K+ ++LLQ+K V++AA DTFRSGAVEQL H R L +V +++KGY K
Sbjct: 440 TNLSKICFFLLQNKYRVLIAAGDTFRSGAVEQLAVHVRNLTELTAREGGKVELYQKGYGK 499
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
D A VA++A+ A G DVVL+DTAGR +++ LM +L K PD +L VGE
Sbjct: 500 DAAQVARDAVAHAAAEGFDVVLIDTAGRRHNDQRLMSSLEKFANFAKPDKILMVGEP--- 556
Query: 509 NDAVDQLSKFNQKLADLSSSP--NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
L+ S+ P + +DG +++K DT+ VG +S+V+ + PV+FV
Sbjct: 557 -----SLAPTRSPRPATSTPPFGAARGLDGFIISKCDTVGTMVGTLVSLVHATNVPVLFV 611
Query: 567 GCGQSYTDLKKLNVKSIVKTLL 588
G GQ Y+DL+ +VK V+ LL
Sbjct: 612 GVGQHYSDLRNFSVKWAVEKLL 633
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAA---- 56
ML+ I T G++LW+ + S I++ I +EE+ A+ D + A
Sbjct: 1 MLDAFEIITTSGVVLWSRSY--TQVSSSLINSFISDVFIEEKGANAATRDDQSAATNPPY 58
Query: 57 ----YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKR-------TD 105
+TLK+TF ELG++FVAVY+ +LHL ++D L+ +K F +Y + D
Sbjct: 59 KTDQHTLKYTFVKELGVIFVAVYRSLLHLSWIDKLVDNIKTLFVNLYGEQLKKPGTSIVD 118
Query: 106 YSDFDEMFRQLRKEAE 121
FD F Q KE E
Sbjct: 119 CDKFDNYFDQQIKELE 134
>gi|256809975|ref|YP_003127344.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus fervens AG86]
gi|256793175|gb|ACV23844.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus fervens AG86]
Length = 397
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 148/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A++ A+ IL+ + IDI + K Q KP V+VFVG+NG GK+T +AK+AY L Q
Sbjct: 158 TINAVKNAIKNILSQEK-IDIEEIIKKNKAQGKPTVIVFVGINGTGKTTTIAKLAYKLKQ 216
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ A G DVV
Sbjct: 217 KGYSVVLAAGDTFRAGAIEQLEQHAKNIGVKVIKHKQGADSAAVIYDAIQHAKARGIDVV 276
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDLV+FVG+AL GNDAV Q +FN+ +
Sbjct: 277 LADTAGRQATNTNLMEEIKKVVRVTKPDLVIFVGDALTGNDAVYQAEEFNKAVD------ 330
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDGI+LTK D D K GAALS+ Y G P++++G GQ Y+DL + + +VK L
Sbjct: 331 ----IDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYSDLIEFDADWMVKKLF 384
>gi|336122297|ref|YP_004577072.1| signal recognition particle-docking protein FtsY
[Methanothermococcus okinawensis IH1]
gi|334856818|gb|AEH07294.1| signal recognition particle-docking protein FtsY
[Methanothermococcus okinawensis IH1]
Length = 407
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 151/238 (63%), Gaps = 12/238 (5%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ A++ A+ IL+ ++++DI + K+ ++P V+VFVG+NG GK+T++AK+A+ L
Sbjct: 169 INALKNAIKEILS-QKNMDIYELIEEKKKSKEPVVIVFVGINGTGKTTSIAKLAHKLKNK 227
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ A G DVVL
Sbjct: 228 GYSVVLAAGDTFRAGAIEQLEEHAKNIGVRVIKHQKGADSAAVIYDAIQHAKARGIDVVL 287
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
DTAGR N LM + K++ + PDLV+FVG++L GNDA++Q +FN N
Sbjct: 288 ADTAGRQATNINLMDEIKKVVRVTKPDLVVFVGDSLAGNDAINQAEEFN----------N 337
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D K GAALS+ Y G P++F+G GQ Y DL++ NV +V L
Sbjct: 338 AVNIDGVILTKVDA-DAKGGAALSIAYAIGKPILFLGVGQRYEDLEEFNVDWMVNKLF 394
>gi|329766354|ref|ZP_08257900.1| signal recognition particle-docking protein FtsY [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137123|gb|EGG41413.1| signal recognition particle-docking protein FtsY [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 464
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 158/249 (63%), Gaps = 19/249 (7%)
Query: 340 KALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
K +KD L++ +EA +ID+ ++ K+ +P++++FVG+NG GK+T+
Sbjct: 70 KFVKDSLISSISTLFDEA--------GTIDLFEKINEKKKTGQPFLILFVGINGTGKTTS 121
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
LAKVA+ L Q K S+++AA DTFR+GA+EQLR H RL + + + Y DPA VA++A+
Sbjct: 122 LAKVAHMLQQAKYSLVVAAADTFRAGAIEQLREHTNRLNLKLVAQNYNSDPAAVARDAVL 181
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A + D VL+DTAGRMQ ++ LM ++K+ + NPD +FVG++L GND V+Q +F
Sbjct: 182 YAKSHKMDCVLIDTAGRMQTSKNLMEQIAKITKVVNPDFKIFVGDSLAGNDTVNQAREFF 241
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ + +G +LTK D D + GAALS+V ++ PV+++G GQ Y+DLK +
Sbjct: 242 EHVK----------FNGSILTKSDA-DARGGAALSIVKITSTPVLYLGVGQEYSDLKPFD 290
Query: 580 VKSIVKTLL 588
++ ++T+
Sbjct: 291 KQTFLETVF 299
>gi|289193001|ref|YP_003458942.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus sp. FS406-22]
gi|288939451|gb|ADC70206.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus sp. FS406-22]
Length = 400
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 147/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A++ A+ IL+ + IDI + K Q KP V+VFVG+NG GK+T +AK+AY L Q
Sbjct: 161 TINAVKNAIKNILSQEK-IDIEEIIKKNKAQGKPTVIVFVGINGTGKTTTIAKLAYKLKQ 219
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ A G DVV
Sbjct: 220 KGYSVVLAAGDTFRAGAIEQLEQHAKNIGVKVIKHKQGADSAAVIYDAIQHAKARGIDVV 279
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDLV+FVG+AL GNDAV Q +FN
Sbjct: 280 LADTAGRQATNINLMEEIKKVVRVTKPDLVIFVGDALTGNDAVCQAEEFN---------- 329
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
N IDGI+LTK D D K GAALS+ Y G P++++G GQ Y+DL + + +VK L
Sbjct: 330 NAVNIDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYSDLIEFDADWMVKKLF 387
>gi|393795973|ref|ZP_10379337.1| signal recognition particle-docking protein FtsY, partial
[Candidatus Nitrosoarchaeum limnia BG20]
Length = 312
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 158/249 (63%), Gaps = 19/249 (7%)
Query: 340 KALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
K +KD L++ +EA +ID+ ++ K+ +P++++FVG+NG GK+T+
Sbjct: 70 KFVKDSLISSISTLFDEA--------GTIDLFEKINEKKKTGQPFLILFVGINGTGKTTS 121
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
LAKVA+ L Q K S+++AA DTFR+GA+EQLR H RL + + + Y DPA VA++A+
Sbjct: 122 LAKVAHMLQQAKYSLVVAAADTFRAGAIEQLREHTNRLNLKLVAQNYNSDPAAVARDAVL 181
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A + D VL+DTAGRMQ ++ LM ++K+ + NPD +FVG++L GND V+Q +F
Sbjct: 182 YAKSHKMDCVLIDTAGRMQTSKNLMEQIAKITKVVNPDFKIFVGDSLAGNDTVNQAREFF 241
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ + +G +LTK D D + GAALS+V ++ PV+++G GQ Y+DLK +
Sbjct: 242 EHVK----------FNGSILTKSDA-DARGGAALSIVKITSTPVLYLGVGQEYSDLKPFD 290
Query: 580 VKSIVKTLL 588
++ ++T+
Sbjct: 291 KQTFLETVF 299
>gi|312136391|ref|YP_004003728.1| signal recognition particle-docking protein ftsy [Methanothermus
fervidus DSM 2088]
gi|311224110|gb|ADP76966.1| signal recognition particle-docking protein FtsY [Methanothermus
fervidus DSM 2088]
Length = 321
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 151/236 (63%), Gaps = 16/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++ A++ IL +++ L + ++KP+V++FVGVNG GK+T +AK+A + ++ +
Sbjct: 101 ALKNAILEILKTDSNVEDLLKI-----KKKPFVILFVGVNGTGKTTTIAKLAKYFMEKGL 155
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
++AA DTFR+GA+EQ+ H +L V + + DPA VA +A+ A DVVL+D
Sbjct: 156 VPVIAAADTFRAGAIEQITKHGEKLGVKVIKHKKGSDPAAVAYDAVNHAKSKNKDVVLID 215
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQ N LM ++K+ + NPD ++FVG+AL GNDAV+Q F++K+
Sbjct: 216 TAGRMQTNMNLMEEMAKIKRVVNPDFIIFVGDALTGNDAVEQAKMFDEKIG--------- 266
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAA+S+ YV G P++F+G GQ+Y DL + + +VK L
Sbjct: 267 -IDGVILTKADA-DTRGGAAISISYVIGKPILFLGIGQNYDDLIEFKPEWVVKQLF 320
>gi|167044950|gb|ABZ09615.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG8G2]
Length = 605
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 147/222 (66%), Gaps = 11/222 (4%)
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
S+DIL ++ + + + PY+++FVG+NG GK+T +AK+A L ++K+SV++AA DTFR+GA
Sbjct: 89 SVDILSNIKSKTDPQDPYLILFVGINGTGKTTTIAKIANLLQKNKISVVVAAADTFRAGA 148
Query: 427 VEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
+EQLR H +L + + + Y DPA VA +A+ A + D VL+D+AGRMQ N+ LM
Sbjct: 149 IEQLREHINKLNLKLIAQNYGSDPAAVAHDALLYAKSHKVDCVLIDSAGRMQTNKNLMEQ 208
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
++K+ + +PDL +FVG++L GNDAV Q +F++ DG +LTK D D
Sbjct: 209 IAKISKVVSPDLKIFVGDSLAGNDAVSQAREFHKHTT----------FDGAILTKSDA-D 257
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ GAALS+V V+ PV++VG GQ Y DL+ + + ++T+
Sbjct: 258 TRGGAALSIVAVTKKPVIYVGTGQGYDDLELFSKEIFLETVF 299
>gi|167044181|gb|ABZ08863.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG5E24]
Length = 464
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 155/242 (64%), Gaps = 18/242 (7%)
Query: 347 MTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+T+N+++M S+DIL ++ + + + PY+++FVG+NG GK+T +AK+A
Sbjct: 76 LTENISSM-------FDDAGSVDILSNIKSKTDPQDPYLILFVGINGTGKTTTIAKIANL 128
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
L ++K+SV++AA DTFR+GA+EQLR H +L + + + Y DPA VA +A+ A +
Sbjct: 129 LQKNKISVVVAAADTFRAGAIEQLREHINKLNLKLIAQNYGSDPAAVAHDALLYAKSHKV 188
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
D VL+D+AGRMQ N+ LM ++K+ + +PDL +FVG++L GNDAV Q +F++
Sbjct: 189 DCVLIDSAGRMQTNKNLMEQIAKISKVVSPDLKIFVGDSLAGNDAVSQAREFHKHTT--- 245
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
DG +LTK D D + GAALS+V V+ PV++VG GQ Y DL+ + + ++T
Sbjct: 246 -------FDGAILTKGDA-DARGGAALSIVAVTKKPVIYVGTGQGYDDLELFSKEIFLET 297
Query: 587 LL 588
+
Sbjct: 298 VF 299
>gi|167044477|gb|ABZ09152.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG6J21]
Length = 498
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 155/242 (64%), Gaps = 18/242 (7%)
Query: 347 MTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+T+N+++M S+DIL ++ + + + PY+++FVG+NG GK+T +AK+A
Sbjct: 76 LTENISSM-------FDDAGSVDILSNIKSKTDPQDPYLILFVGINGTGKTTTIAKIANL 128
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
L ++K+SV++AA DTFR+GA+EQLR H +L + + + Y DPA VA +A+ A +
Sbjct: 129 LQKNKISVVVAAADTFRAGAIEQLREHINKLNLKLIAQNYGSDPAAVAHDALLYAKSHKV 188
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
D VL+D+AGRMQ N+ LM ++K+ + +PDL +FVG++L GNDAV Q +F++
Sbjct: 189 DCVLIDSAGRMQTNKNLMEQIAKISKVVSPDLKIFVGDSLAGNDAVSQAREFHKHTT--- 245
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
DG +LTK D D + GAALS+V V+ PV++VG GQ Y DL+ + + ++T
Sbjct: 246 -------FDGAILTKGDA-DARGGAALSIVAVTKKPVIYVGTGQGYDDLELFSKEIFLET 297
Query: 587 LL 588
+
Sbjct: 298 VF 299
>gi|167045397|gb|ABZ10052.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG10F15]
Length = 559
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 147/222 (66%), Gaps = 11/222 (4%)
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
S+DIL ++ + + + PY+++FVG+NG GK+T +AK+A L ++K+SV++AA DTFR+GA
Sbjct: 89 SVDILSNIKSKTDPQDPYLILFVGINGTGKTTTVAKIANLLQKNKISVVVAAADTFRAGA 148
Query: 427 VEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
+EQLR H +L + + + Y DPA VA +A+ A + D VL+D+AGRMQ N+ LM
Sbjct: 149 IEQLREHINKLNLKLIAQNYGSDPAAVAHDALLYAKSHKVDCVLIDSAGRMQTNKNLMEQ 208
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
++K+ + +PDL +FVG++L GNDAV Q +F++ DG +LTK D D
Sbjct: 209 IAKISKVVSPDLKIFVGDSLAGNDAVSQAREFHKHTT----------FDGAILTKSDA-D 257
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ GAALS+V V+ PV++VG GQ Y DL+ + + ++T+
Sbjct: 258 TRGGAALSIVAVTKKPVIYVGTGQGYDDLELFSKEIFLETVF 299
>gi|15668466|ref|NP_247264.1| signal recognition particle, receptor [Methanocaldococcus
jannaschii DSM 2661]
gi|2500888|sp|Q57739.1|FTSY_METJA RecName: Full=Signal recognition particle receptor FtsY; Short=SRP
receptor
gi|1591013|gb|AAB98276.1| signal recognition particle, receptor [Methanocaldococcus
jannaschii DSM 2661]
Length = 409
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A++ A+ IL+ + IDI + K + KP V+VFVG+NG GK+T +AK+AY L Q
Sbjct: 170 TINAVKNAIKNILSQEK-IDIEEIIKKNKAEGKPTVIVFVGINGTGKTTTIAKLAYKLKQ 228
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ A G DVV
Sbjct: 229 KGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIKHKPGADSAAVIYDAIQHAKARGIDVV 288
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDLV+FVG+AL GNDAV Q +FN+ +
Sbjct: 289 LADTAGRQATNVNLMEEIKKVVRVTKPDLVIFVGDALTGNDAVYQAEEFNRAVN------ 342
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDGI+LTK D D K GAALS+ Y G P++++G GQ Y DL + + +V+ L
Sbjct: 343 ----IDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVGQRYQDLIEFDADWMVRKLF 396
>gi|84489410|ref|YP_447642.1| hypothetical protein Msp_0601 [Methanosphaera stadtmanae DSM 3091]
gi|84372729|gb|ABC56999.1| partially conserved hypothetical protein, predicted GTPase
[Methanosphaera stadtmanae DSM 3091]
Length = 550
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 163/266 (61%), Gaps = 25/266 (9%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSID 369
F I G D A E ++++K+ L+ K + A+++A+ I+ D
Sbjct: 280 FSLIEGDVAFDVA--ERIVESVKEDLIGKKIKRRGDMELFTTNALKKAITEII-DNGYYD 336
Query: 370 ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQ 429
+L D+ +KE+ +PY ++FVG+NG GK+T +AK+A +L +H S + A DTFR+GA+EQ
Sbjct: 337 LLGDIEKSKEKGEPYKIMFVGINGTGKTTTIAKIATYLEKHGYSSVFGASDTFRAGAIEQ 396
Query: 430 LRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK 489
L HA L + I + DPA VA +A++ A +G DVVL+DT+GRMQ N LM + K
Sbjct: 397 LEHHANNLNLKIIKHERNSDPAAVAFDAVEHAKASGKDVVLIDTSGRMQTNANLMDEMKK 456
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
+ ++ PD+V++VG+AL+GNDA +Q SKFN+ + IDGI+LTK D K
Sbjct: 457 IKRVSQPDIVIYVGDALMGNDATEQASKFNEVID----------IDGIILTKA-DADAKG 505
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDL 575
GAA+S+ +V P++F+G GQSY DL
Sbjct: 506 GAAISIGHVIHKPILFIGTGQSYDDL 531
>gi|395755911|ref|XP_003780039.1| PREDICTED: signal recognition particle receptor subunit alpha-like,
partial [Pongo abelii]
Length = 140
Score = 184 bits (468), Expect = 9e-44, Method: Composition-based stats.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+
Sbjct: 11 ARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNR 70
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 71 ALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNA 130
Query: 581 KSIVKTLLK 589
K++V L+K
Sbjct: 131 KAVVAALMK 139
>gi|150403620|ref|YP_001330914.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis C7]
gi|150034650|gb|ABR66763.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis C7]
Length = 383
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 148/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A+++++ IL+ +S D+ + + K + KP V++FVG+NG GK+T+++K+ Y L +
Sbjct: 144 TINALKKSIKEILSQEQS-DVFKLIDEKKAKGKPAVLLFVGINGTGKTTSISKLGYILKE 202
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV+MAA DTFR+GA+EQL H + + + + D A V +AI A G DVV
Sbjct: 203 RGYSVVMAAGDTFRAGAIEQLEEHGKNTAIKVIKHQKGADSAAVIYDAISHAKAKGIDVV 262
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDL++FVG++L GNDA+ Q +FN
Sbjct: 263 LADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFN---------- 312
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
N IDG +LTK D D K GAALS+ Y G P++F+G GQ Y+D+++ +V+ +VK L
Sbjct: 313 NAIDIDGAILTKTDA-DAKGGAALSIAYSIGKPILFMGVGQRYSDIQEFDVEWMVKKLF 370
>gi|297619379|ref|YP_003707484.1| signal recognition particle-docking protein FtsY [Methanococcus
voltae A3]
gi|297378356|gb|ADI36511.1| signal recognition particle-docking protein FtsY [Methanococcus
voltae A3]
Length = 399
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 158/264 (59%), Gaps = 21/264 (7%)
Query: 335 LEPALKALKDRLMTKNVAA-------MEEAL---VRILTPRRSIDILRDVHAAKEQRKPY 384
+E +++LK+ L+ + + +E AL +R + + IDI + + +P
Sbjct: 134 VENIIESLKESLIGLKITSEDNPEEIIETALKNSIRNILAQEKIDIEELIQNKNKNGEPA 193
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++F+G+NG GK+T+++K+AY L Q+ S++MAA DTFR+GA+EQL HA L+V + +
Sbjct: 194 VIIFLGINGTGKTTSISKLAYKLKQNGHSIVMAAGDTFRAGAIEQLEEHANNLEVKVIKH 253
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
D A V +AIQ A DVVL DTAGR N LM + K++ + PDLV+FVG+
Sbjct: 254 QKGADSAAVIFDAIQHAKAKKIDVVLADTAGRQTTNINLMSEIKKVVRVTKPDLVVFVGD 313
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L GNDA++Q +FN N IDG +LTK D D K GAALS+ + G P++
Sbjct: 314 SLAGNDAINQAEEFN----------NAVNIDGAILTKTDA-DAKGGAALSIAHSIGKPIL 362
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
++G GQ Y+DL++ +V +V L
Sbjct: 363 YMGVGQRYSDLQEFDVDWMVNKLF 386
>gi|207346488|gb|EDZ72970.1| YDR292Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 595
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 206/420 (49%), Gaps = 87/420 (20%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKEEVFS------SDSESEEDEEVGKHNKPDAKKTGWFSSMF----QSIA 325
++ + +S D+ E D S +E+ N +AK +G+ S+ F + +
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGN--EAKNSGYVSTAFGFLQKHVL 301
Query: 326 GKANLDKADLEPALKALKDRLMTKNVA--------------------------------A 353
G ++++DL+ L+ L +L+TKNVA +
Sbjct: 302 GNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTARES 361
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWL 407
+ +AL +ILTP S+D+LR++ + + ++ PYV VGVNGVGKSTNL+K+A+WL
Sbjct: 362 LTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFWL 421
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRL----------------------QVPIFEKG 445
LQ+ V++ ACDTFRSGAVEQLR H L V +FE G
Sbjct: 422 LQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEAG 481
Query: 446 YEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
Y + +AK+AI+ + D+VL+DTAGR ++ LM L PD ++ VG
Sbjct: 482 YGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKPDKIIMVG 541
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
EALVG D+V Q FN + +D +++K DT+ + +G ++MVY +G P+
Sbjct: 542 EALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTVGEMLGTMVNMVYATGIPI 595
>gi|134045929|ref|YP_001097415.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis C5]
gi|132663554|gb|ABO35200.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis C5]
Length = 383
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 147/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A+++++ IL+ + ID+ + K + +P V++FVG+NG GK+T+++K+AY L +
Sbjct: 144 TINALKKSIKEILSQEK-IDVFGLIDEKKSKGEPAVLLFVGINGTGKTTSISKLAYILKE 202
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
S +MAA DTFR+GA+EQL H + + + + D A V +AI A G +VV
Sbjct: 203 RGYSAVMAAGDTFRAGAIEQLEEHGKNTDIKVIKHQKGADSAAVIYDAINHAKAKGLNVV 262
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDL++FVG++L GNDA+ Q +FN
Sbjct: 263 LADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFN---------- 312
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
N IDG +LTK D D K GAALS+ Y G P++F+G GQ Y+DL++ +VK +VK L
Sbjct: 313 NAINIDGAILTKTDA-DAKGGAALSIAYAIGKPILFMGIGQRYSDLQEFDVKWMVKKLF 370
>gi|148642761|ref|YP_001273274.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
smithii ATCC 35061]
gi|148551778|gb|ABQ86906.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
smithii ATCC 35061]
Length = 470
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
Query: 353 AMEEALVRIL-TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
A+ A+ I+ P +S+ + + A K Q +P VV+FVG+NG GK+T + K+A + L+
Sbjct: 235 ALRNAVAEIIDIPGKSMTEM--IEAKKAQGEPLVVMFVGINGTGKTTTIGKLANYYLKKG 292
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++AA DTFR+GA+EQ+ HA ++ V + + DPA VA +A++ A G ++VL+
Sbjct: 293 YTPVIAAADTFRAGAIEQVNYHADKVGVKLIKHQKGSDPAAVAFDAVEHAKAQGKELVLI 352
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRMQ N LM + K+ + PDLV+FVG+AL GNDA Q SKFN+ +
Sbjct: 353 DTAGRMQTNTNLMDEMKKIKRVAKPDLVVFVGDALTGNDATQQASKFNEAID-------- 404
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DG++LTK D D K GA+LS+ YV P++F+G GQ Y D+K+ + ++ L
Sbjct: 405 --LDGVILTKADA-DSKGGASLSIGYVIKKPILFLGMGQGYDDIKEYDADWMLNQLF 458
>gi|261349709|ref|ZP_05975126.1| putative signal recognition particle protein [Methanobrevibacter
smithii DSM 2374]
gi|288861664|gb|EFC93962.1| putative signal recognition particle protein [Methanobrevibacter
smithii DSM 2374]
Length = 470
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
Query: 353 AMEEALVRIL-TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
A+ A+ I+ P +S+ + + A K Q +P VV+FVG+NG GK+T + K+A + L+
Sbjct: 235 ALRNAVAEIIDIPGKSMTEM--IEAKKAQGEPLVVMFVGINGTGKTTTIGKLANYYLKKG 292
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++AA DTFR+GA+EQ+ HA ++ V + + DPA VA +A++ A G ++VL+
Sbjct: 293 YTPVIAAADTFRAGAIEQVNYHADKVGVKLIKHQKGSDPAAVAFDAVEHAKAQGKELVLI 352
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRMQ N LM + K+ + PDLV+FVG+AL GNDA Q SKFN+ +
Sbjct: 353 DTAGRMQTNTNLMDEMKKIKRVAKPDLVVFVGDALTGNDATQQASKFNEAID-------- 404
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DG++LTK D D K GA+LS+ YV P++F+G GQ Y D+K+ + ++ L
Sbjct: 405 --LDGVILTKADA-DSKGGASLSIGYVIKKPILFLGMGQGYDDIKEYDADWMLNQLF 458
>gi|222445744|ref|ZP_03608259.1| hypothetical protein METSMIALI_01386 [Methanobrevibacter smithii
DSM 2375]
gi|222435309|gb|EEE42474.1| signal recognition particle-docking protein FtsY
[Methanobrevibacter smithii DSM 2375]
Length = 480
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
Query: 353 AMEEALVRIL-TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
A+ A+ I+ P +S+ + + A K Q +P VV+FVG+NG GK+T + K+A + L+
Sbjct: 245 ALRNAVAEIIDIPGKSMTEM--IEAKKAQGEPLVVMFVGINGTGKTTTIGKLANYYLKKG 302
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++AA DTFR+GA+EQ+ HA ++ V + + DPA VA +A++ A G ++VL+
Sbjct: 303 YTPVIAAADTFRAGAIEQVNYHADKVGVKLIKHQKGSDPAAVAFDAVEHAKAQGKELVLI 362
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRMQ N LM + K+ + PDLV+FVG+AL GNDA Q SKFN+ +
Sbjct: 363 DTAGRMQTNTNLMDEMKKIKRVAKPDLVVFVGDALTGNDATQQASKFNEAID-------- 414
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DG++LTK D D K GA+LS+ YV P++F+G GQ Y D+K+ + ++ L
Sbjct: 415 --LDGVILTKADA-DSKGGASLSIGYVIKKPILFLGMGQGYDDIKEYDADWMLNQLF 468
>gi|167045193|gb|ABZ09853.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG8O8]
Length = 494
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 138/213 (64%), Gaps = 11/213 (5%)
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
S D++ D+ + + PY+++FVG+NG GK+T +AK+A L ++K+S+++AA DTFR+GA
Sbjct: 89 SFDLISDIKLKTDPQDPYLILFVGINGTGKTTTIAKIASLLQKNKISLVVAASDTFRAGA 148
Query: 427 VEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
+EQLR H +L + + + Y DPA VA +A+ A + D VL+D+AGRMQ N+ LM
Sbjct: 149 IEQLRGHTDKLNLKLVAQNYGSDPAAVAHDALLYAKSHKVDCVLIDSAGRMQTNKNLMEQ 208
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
++K+ + NPDL +FVG++L GND V Q +F + DG +LTK D D
Sbjct: 209 ITKISKVVNPDLKIFVGDSLAGNDTVSQAREFYKHTN----------FDGAVLTKSDA-D 257
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ GAALS+V V+ PV+++G GQ Y DL+ N
Sbjct: 258 SRGGAALSIVAVTKKPVVYIGTGQGYDDLELFN 290
>gi|150400486|ref|YP_001324252.1| signal recognition particle-docking protein FtsY [Methanococcus
aeolicus Nankai-3]
gi|150013189|gb|ABR55640.1| signal recognition particle-docking protein FtsY [Methanococcus
aeolicus Nankai-3]
Length = 383
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 145/238 (60%), Gaps = 12/238 (5%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ A+ A+ +L+ ++ IDI + + K +P V+V VG+NG GK+T ++K+AY L+ +
Sbjct: 139 INALRNAIKEVLS-QKEIDIYKLIEEKKSNGEPTVIVVVGINGTGKTTTISKLAYKLMNN 197
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
SV++AA DTFR+GA+EQL HA+ + + + D A V +AI A G VVL
Sbjct: 198 GYSVVLAAGDTFRAGAIEQLEEHAKNIGAKVIKHQKGSDGAAVIYDAINHAKARGISVVL 257
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
DTAGR N LM + K++ ++NPDLV+FVG++L GNDA+ Q +FN N
Sbjct: 258 ADTAGRQTTNINLMAEIKKVVRVSNPDLVVFVGDSLAGNDAITQAEEFN----------N 307
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D K GAALS+ + G P++F+G GQ Y DL + NV ++ L
Sbjct: 308 MVNIDGVILTKTDA-DAKGGAALSIAHAIGKPILFLGVGQRYEDLMEFNVNWMINKLF 364
>gi|333910376|ref|YP_004484109.1| signal recognition particle-docking protein FtsY [Methanotorris
igneus Kol 5]
gi|333750965|gb|AEF96044.1| signal recognition particle-docking protein FtsY [Methanotorris
igneus Kol 5]
Length = 399
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 146/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A++ A+ IL+ + ID+ + K++ +P V VFVG+NG GK+T++AK+AY L
Sbjct: 160 TINALKNAIKEILS-QEHIDVEEIIKEKKKKGEPAVFVFVGINGTGKTTSIAKLAYKLKN 218
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV++AA DTFR+GA+EQL HA+ + V + + D A V +AIQ A G DVV
Sbjct: 219 KGYSVVLAAGDTFRAGAIEQLEEHAKNVGVKVIKHQKGADSAAVIYDAIQHAKARGIDVV 278
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDLV+FVG+AL GNDA+ Q +FN
Sbjct: 279 LADTAGRQATNVNLMDEIKKVVRVTKPDLVIFVGDALAGNDAIYQAEEFN---------- 328
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
N IDG++LTK D D K GAALS+ Y G P++++G GQ Y DL + +V +V L
Sbjct: 329 NAVNIDGVILTKVDA-DAKGGAALSIAYAIGKPILYLGVGQRYEDLIEFDVDWMVNKLF 386
>gi|288930433|ref|YP_003434493.1| signal recognition particle-docking protein FtsY [Ferroglobus
placidus DSM 10642]
gi|288892681|gb|ADC64218.1| signal recognition particle-docking protein FtsY [Ferroglobus
placidus DSM 10642]
Length = 326
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 151/250 (60%), Gaps = 12/250 (4%)
Query: 340 KALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTN 399
K + + L + + ++E L IL+ + D V E++KP ++FVGVNG GK+T
Sbjct: 89 KGIGESLSSLVLKELKEILREILS-KNYFDFDEFVEKKLEEKKPLHIIFVGVNGTGKTTT 147
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
+AK+AY LL+ SV++AA DTFR+GA+EQL H ++L V + + DPA V +AI+
Sbjct: 148 IAKLAYRLLKSGKSVVLAAGDTFRAGAIEQLEEHGKKLGVRVIKHKPGADPAAVIYDAIK 207
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVL DTAGRM + L+ L K+ + NPDL +FV E+L GNDAV++ FN
Sbjct: 208 HAESKGIDVVLSDTAGRMHTKKNLIDQLEKIKRVTNPDLTIFVDESLAGNDAVERARMFN 267
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ + IDG +LTK D D K G A+S+ YV+ P++FVG GQ+Y DL K +
Sbjct: 268 EAIG----------IDGSILTKIDA-DPKGGCAISISYVTEKPILFVGTGQNYEDLVKFD 316
Query: 580 VKSIVKTLLK 589
++K + +
Sbjct: 317 PDWLIKRIFE 326
>gi|296109711|ref|YP_003616660.1| signal recognition particle-docking protein FtsY
[methanocaldococcus infernus ME]
gi|295434525|gb|ADG13696.1| signal recognition particle-docking protein FtsY
[Methanocaldococcus infernus ME]
Length = 370
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 148/236 (62%), Gaps = 12/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++ +++ IL+ R ID+ + +++ KP V+VFVG+NG GK+T++AK+AY L
Sbjct: 134 AVKNSILNILS-REKIDLEEIIQKNRKEGKPTVIVFVGINGTGKTTSIAKLAYKLKNKGY 192
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL HA+R+ V + ++ D A V +AIQ A DVVL D
Sbjct: 193 SVVLAAGDTFRAGAIEQLEEHAKRIGVKVIKQKPGADAAAVIYDAIQHAKAKKIDVVLAD 252
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR N LM + K++ + PDLV+FV +AL GNDA+ Q +FN+ +
Sbjct: 253 TAGRQATNINLMDEIKKVVRVTKPDLVIFVADALTGNDAIFQAEEFNKAVG--------- 303
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D K GAA+S+ Y G P++++G GQ Y DL + + I+K +
Sbjct: 304 -IDGVILTKVDA-DAKGGAAISIGYAIGKPILYLGVGQRYEDLIEFSPDFIIKKIF 357
>gi|73668009|ref|YP_304024.1| signal recognition particle-docking protein FtsY [Methanosarcina
barkeri str. Fusaro]
gi|72395171|gb|AAZ69444.1| signal recognition particle-docking protein FtsY [Methanosarcina
barkeri str. Fusaro]
Length = 422
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 145/235 (61%), Gaps = 11/235 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+EEAL + + S + +++ KP +VFVG+NG GK+T++AK+ + LL+ S
Sbjct: 192 VEEALKKAILEVVSANTFDFDEYVRDREKPVHIVFVGINGTGKTTSIAKITHRLLKSDYS 251
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
V++AA DTFR+GA++QL HA RL V + + DPA V +A+Q A + D VL DT
Sbjct: 252 VVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQPGADPAAVIYDAVQYAKGHKIDFVLSDT 311
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGRM N LM + K+ ++ PDL++FV EA+ GNDAV++ ++FN+ +
Sbjct: 312 AGRMHTNLNLMSQMEKICRVSTPDLIIFVDEAVAGNDAVERAAQFNEAVP---------- 361
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D K GAA+S+ Y++G P++F G GQ Y DLKK + + + L
Sbjct: 362 IDGSILTKIDA-DAKGGAAISIAYITGKPILFFGIGQGYEDLKKFDPEWFIDQLF 415
>gi|294495862|ref|YP_003542355.1| signal recognition particle-docking protein FtsY [Methanohalophilus
mahii DSM 5219]
gi|292666861|gb|ADE36710.1| signal recognition particle-docking protein FtsY [Methanohalophilus
mahii DSM 5219]
Length = 351
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 134/208 (64%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP +VFVG+NG GK+T++AK+A+ L SV++AA DTFR+GA++Q+ HA R+ V
Sbjct: 154 EKPVNIVFVGINGTGKTTSIAKIAHRLKAMNKSVVIAAGDTFRAGAIDQIAVHAERIGVK 213
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ + DPA V +A+Q A + SDVVL DTAGRM N LM L K+ ++ PDLVL
Sbjct: 214 LIKHQEGGDPAAVVYDAVQYAKAHDSDVVLSDTAGRMHTNVNLMAQLQKICRVSPPDLVL 273
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV EA+ GNDAV++ +FN+ + +DG +LTK D D K GAA+S+ Y++G
Sbjct: 274 FVDEAVAGNDAVERAEQFNEAVP----------VDGSILTKTDA-DSKGGAAISIAYITG 322
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G GQ Y DLKK + + V +
Sbjct: 323 KPIVFLGLGQEYEDLKKFDPRWFVDQIF 350
>gi|11499644|ref|NP_070886.1| signal recognition particle receptor [Archaeoglobus fulgidus DSM
4304]
gi|2648469|gb|AAB89189.1| signal recognition particle receptor (dpa) [Archaeoglobus fulgidus
DSM 4304]
Length = 340
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 134/210 (63%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
+++KP V+ FVGVNG GK+T +AKVA L++ SV++AA DTFR+GA+EQL HA+RL
Sbjct: 141 KEKKPVVIAFVGVNGTGKTTTIAKVANRLIKQGYSVVLAAGDTFRAGAIEQLEEHAKRLG 200
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
V + + + DPA V +AI+ A G DVVL DTAGRM + L+ L K+ + PDL
Sbjct: 201 VKLIKHKHGSDPAAVIYDAIKHAESKGIDVVLADTAGRMHTKKNLLDQLEKIKRVTKPDL 260
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
++FV E++ GNDAV++ F + + IDG +LTK D D K G+A+S+ YV
Sbjct: 261 IIFVDESIAGNDAVERARMFAETVG----------IDGSILTKLDA-DPKGGSAISISYV 309
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ PV+F G GQ Y DL K + K +V+ +
Sbjct: 310 TKKPVLFFGVGQEYDDLVKFDSKWLVERIF 339
>gi|374636786|ref|ZP_09708336.1| signal recognition particle-docking protein FtsY [Methanotorris
formicicus Mc-S-70]
gi|373557875|gb|EHP84253.1| signal recognition particle-docking protein FtsY [Methanotorris
formicicus Mc-S-70]
Length = 390
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 158/265 (59%), Gaps = 23/265 (8%)
Query: 335 LEPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSIDILRDVHAAKEQRKP 383
+E +++LKD+L+ ++ A++ A+ IL+ + ID+ + K++ +P
Sbjct: 125 VEKIIESLKDQLIGMKISPNDDPGEVTINALKNAIREILS-QEVIDVEEIIKEKKKKGEP 183
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE 443
V VFVG+NG GK+T++AK+AY L SV++AA DTFR+GA+EQL HA+ + V + +
Sbjct: 184 AVFVFVGINGTGKTTSIAKLAYKLKNKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVRVIK 243
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
D A V +AIQ A G DVVL DTAGR N LM + K++ + PDLV+FVG
Sbjct: 244 HQKGADSAAVIYDAIQHAKARGIDVVLADTAGRQATNINLMDEMKKVVRVTKPDLVIFVG 303
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
+AL GNDA+ Q +FN N IDG++LTK D D K G+ALS+ Y G P+
Sbjct: 304 DALAGNDAIYQAEEFN----------NAVNIDGVILTKVDA-DAKGGSALSIAYAIGKPI 352
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+++G GQ Y DL + +V ++ L
Sbjct: 353 LYLGVGQRYGDLIEFDVDWMINKLF 377
>gi|60623873|ref|NP_377324.2| signal recognition particle receptor protein [Sulfolobus tokodaii
str. 7]
Length = 378
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 144/236 (61%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++++++ ILT + ID++ ++ K +KPYV+VF GVNGVGK+T +AKVAY L ++K+
Sbjct: 154 SLKKSIEEILTKNQRIDLIEEIR--KRNKKPYVIVFFGVNGVGKTTTIAKVAYLLKKNKI 211
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
S +++A DTFR+ A EQL HA +L++PI + Y DPA VA +AI A DVVL+D
Sbjct: 212 SCIISASDTFRAAAQEQLAYHASKLEIPIVKGKYGADPASVAFDAINSAKSRNIDVVLID 271
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM +E L+ L +++ + PDL + V ++L GNDA++Q F +
Sbjct: 272 TAGRMHIDEDLVSELKRIVKIAKPDLRILVLDSLAGNDALEQAKYFENNVG--------- 322
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
D ++LTK D D K G LS+ Y PV+++G GQ Y L + + +K L
Sbjct: 323 -YDAVILTKVDA-DAKGGVILSLAYELNKPVIYLGVGQDYDSLIPFDAEWFIKRLF 376
>gi|435851048|ref|YP_007312634.1| signal recognition particle-docking protein FtsY
[Methanomethylovorans hollandica DSM 15978]
gi|433661678|gb|AGB49104.1| signal recognition particle-docking protein FtsY
[Methanomethylovorans hollandica DSM 15978]
Length = 387
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 193/367 (52%), Gaps = 47/367 (12%)
Query: 257 ESKLDFTDPAGGNG-----SNIEVEAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDA 311
ES++DF P+ S + E + + + ++ + S + +D + P+
Sbjct: 34 ESEIDFISPSTPETEEQLLSGVATEIVN--DEVEPQKTIVSDQTTDTKDIDAKASKSPEQ 91
Query: 312 KKTGWFSSMFQSIAGKAN-LDKADLEPALKALKDRLMTKNVA------AMEEALVRILTP 364
KKTG S + + LD+ DLE L L+ L+ ++A EE ++
Sbjct: 92 KKTGLVSKAKALVFEREFILDEKDLEEPLWDLQIALLESDIALTVAEAITEEVKSELVGS 151
Query: 365 RRSI-----DI--------LRDVHAA---------KEQRKPYVVVFVGVNGVGKSTNLAK 402
RR I DI L +V +A + RKP +VFVG+NG GK+T++AK
Sbjct: 152 RRKIGKDTTDIVEQALRNALYNVMSANIFDLDDYVRNARKPVHMVFVGINGTGKTTSIAK 211
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEAT 462
A SV++AA DTFR+GA++QL+ H R+ V + DPA V +AIQ A
Sbjct: 212 TAKRFKDMGYSVVLAAGDTFRAGAIDQLQIHGDRVGVKVIRHQEGGDPAAVVYDAIQYAK 271
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
+ +D+VL DTAGRM N LM L K+ ++ PDL++FV EA+ GNDAV++ ++FN+ +
Sbjct: 272 AHRADIVLSDTAGRMHTNLNLMEQLKKVCRVSTPDLIIFVDEAVAGNDAVERAAQFNEAV 331
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
I+G +LTK D D K GAA+S+ Y++G P++F+G GQ Y DL+K + K
Sbjct: 332 P----------INGSILTKTDA-DAKGGAAISIAYITGKPILFLGMGQGYDDLQKFDPKW 380
Query: 583 IVKTLLK 589
V + +
Sbjct: 381 FVDQIFE 387
>gi|410669697|ref|YP_006922068.1| signal recognition particle-docking protein FtsY [Methanolobus
psychrophilus R15]
gi|409168825|gb|AFV22700.1| signal recognition particle-docking protein FtsY [Methanolobus
psychrophilus R15]
Length = 443
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 181/323 (56%), Gaps = 42/323 (13%)
Query: 296 ESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKAN--LDKADLEPALKALKDRLMTKNVA- 352
+SE D E K AKK G F+ ++ + L++ DLE L L+ L+ ++A
Sbjct: 131 QSEVDREKAGAEKEKAKKIG-FAQKAKAFVMEREFILEEDDLEEPLWDLQMALLESDIAL 189
Query: 353 AMEEALV-----RILTPRRSI-------------DILRDVHAA---------KEQRKPYV 385
++ EA+V +++ RR I + DV +A ++ +KP
Sbjct: 190 SVSEAIVNSVKEQLVGTRRRIGKDTGEIVEIALKKAIYDVMSANVFDFDDYVRDAKKPVH 249
Query: 386 VVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKG 445
+VFVG+NG GK+T++AK+A L SV++AA DTFR+GA++Q+ H + L V + +
Sbjct: 250 IVFVGINGTGKTTSIAKLAKRLTDQGYSVVIAAGDTFRAGAIDQIAIHGKNLGVKVIKHQ 309
Query: 446 YEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEA 505
+ DPA V +A+Q A N DVVL DTAGRM N LM L K+ +++PDL++FV EA
Sbjct: 310 EQGDPAAVVYDALQHAKANKVDVVLSDTAGRMHTNINLMAQLKKVCRVSSPDLLIFVDEA 369
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
+ GNDAV++ S+FN + + G +LTK D D K GAA+S+ Y++G P++F
Sbjct: 370 VAGNDAVERASQFNDAVP----------LSGSILTKTDA-DAKGGAAISIAYITGKPILF 418
Query: 566 VGCGQSYTDLKKLNVKSIVKTLL 588
+G GQ Y DL+K + + V L
Sbjct: 419 LGMGQGYDDLQKFDPQWFVDQLF 441
>gi|288559662|ref|YP_003423148.1| signal recognition particle receptor FtsY [Methanobrevibacter
ruminantium M1]
gi|288542372|gb|ADC46256.1| signal recognition particle receptor FtsY [Methanobrevibacter
ruminantium M1]
Length = 576
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 132/200 (66%), Gaps = 11/200 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
Q +P VV+ VG+NG GK+T + K+A + ++ + ++AA DTFR+GA+EQ+ HA +L V
Sbjct: 378 QGEPLVVMLVGINGTGKTTTIGKLANFYIKKGYTPVIAASDTFRAGAIEQVAYHADKLGV 437
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ + DPA VA +A+Q A G ++VL+DTAGRMQ N LM + K+ ++ PDLV
Sbjct: 438 KLIKHEKGSDPAAVAFDAVQHAKAKGKELVLIDTAGRMQTNTNLMDEMKKIRRVSKPDLV 497
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
+FVG+AL GNDA +Q KFN+ + IDG++LTK D D K GAALS+ Y+
Sbjct: 498 VFVGDALTGNDATEQARKFNEAID----------IDGVILTKADA-DSKGGAALSVGYII 546
Query: 560 GAPVMFVGCGQSYTDLKKLN 579
P++F+G GQSY D+K+ +
Sbjct: 547 QKPILFLGMGQSYDDIKEYD 566
>gi|342306456|dbj|BAK54545.1| putative signal recognition particle receptor alpha subunit
[Sulfolobus tokodaii str. 7]
Length = 247
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 144/236 (61%), Gaps = 13/236 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++++++ ILT + ID++ ++ K +KPYV+VF GVNGVGK+T +AKVAY L ++K+
Sbjct: 23 SLKKSIEEILTKNQRIDLIEEIR--KRNKKPYVIVFFGVNGVGKTTTIAKVAYLLKKNKI 80
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
S +++A DTFR+ A EQL HA +L++PI + Y DPA VA +AI A DVVL+D
Sbjct: 81 SCIISASDTFRAAAQEQLAYHASKLEIPIVKGKYGADPASVAFDAINSAKSRNIDVVLID 140
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM +E L+ L +++ + PDL + V ++L GNDA++Q F +
Sbjct: 141 TAGRMHIDEDLVSELKRIVKIAKPDLRILVLDSLAGNDALEQAKYFENNVG--------- 191
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
D ++LTK D D K G LS+ Y PV+++G GQ Y L + + +K L
Sbjct: 192 -YDAVILTKVDA-DAKGGVILSLAYELNKPVIYLGVGQDYDSLIPFDAEWFIKRLF 245
>gi|20092902|ref|NP_618977.1| signal recognition particle receptor [Methanosarcina acetivorans
C2A]
gi|74527963|sp|Q8TIN7.1|FTSY_METAC RecName: Full=Signal recognition particle receptor FtsY; Short=SRP
receptor
gi|19918211|gb|AAM07457.1| signal recognition particle receptor [Methanosarcina acetivorans
C2A]
Length = 417
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 148/237 (62%), Gaps = 15/237 (6%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
AA+++A++ +++ + D V K + KP +VFVG+NG GK+T+++K+ LL+
Sbjct: 194 AALKKAILEVVSAN-TFDFDEYV---KNREKPVHIVFVGINGTGKTTSISKITNRLLKSG 249
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
SV++AA DTFR+GA++QL HA RL V + + DPA V +A+Q A + D VL
Sbjct: 250 YSVVLAAGDTFRAGAIDQLGIHANRLGVKMIKHQAGADPAAVIYDAVQYAKAHKIDFVLS 309
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRM N LM + K+ ++ PDL++FV EA+ GNDAV++ ++FN+ +
Sbjct: 310 DTAGRMHTNMNLMAQMEKICRVSTPDLIIFVDEAVAGNDAVERAAQFNEAVP-------- 361
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D K GAA+S+ Y++G P++F G GQ Y DLKK + + V L
Sbjct: 362 --IDGSILTKIDA-DAKGGAAISIAYITGKPILFFGIGQGYEDLKKFDPEWFVDQLF 415
>gi|268325095|emb|CBH38683.1| putative signal recognition particle protein [uncultured archaeon]
Length = 350
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 143/236 (60%), Gaps = 12/236 (5%)
Query: 354 MEEALVRILTPRRSIDILRDVHA-AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
+EEA+ L S D D A E +KP ++VFVGVNG GK+T++AKVA LL
Sbjct: 115 VEEAVRNALLNVFSADSELDFDAFVDEGKKPIIIVFVGVNGTGKTTSIAKVAKKLLGTGH 174
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DT+R+GA EQ+ THA L + + + Y DPA V +A + A+ NG DVVL D
Sbjct: 175 SVVIAAADTYRAGAAEQIETHASNLGLKVIKHQYGSDPAAVVYDANKYASANGIDVVLAD 234
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + PD+VLFV EA+ GNDAV++ KFN+ +
Sbjct: 235 TAGRMHTSINLMEQLKKICRVTKPDMVLFVDEAVAGNDAVERAKKFNEDIG--------- 285
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ID +LTK D +D K G A+S+ + + P++F+G GQ Y DL + + +V LL
Sbjct: 286 -IDAAILTKVD-VDAKGGTAISIAHSTSKPILFLGKGQDYDDLVEFDAVWLVDRLL 339
>gi|159904596|ref|YP_001548258.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis C6]
gi|159886089|gb|ABX01026.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis C6]
Length = 379
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 147/239 (61%), Gaps = 12/239 (5%)
Query: 350 NVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ A+++++ IL+ + ID+ + K + +P +++FVG+NG GK+T+++K+AY L +
Sbjct: 140 TINALKKSIKEILSQEK-IDVFGLIDEKKAKGEPAILLFVGINGTGKTTSISKLAYILKE 198
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
SV+MAA DTFR+GA+EQL H + + + + D A V +AI + G +VV
Sbjct: 199 RGYSVVMAAGDTFRAGAIEQLEEHGKNTDIKVIKHQKGADSAAVIYDAINHSKAKGINVV 258
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGR N LM + K++ + PDL++FVG++L GNDA+ Q +FN
Sbjct: 259 LADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFN---------- 308
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
N I G +LTK D D K GAALS+ Y G P++F+G GQ Y+DL++ +V+ ++K L
Sbjct: 309 NAINIHGAILTKTDA-DAKGGAALSIAYAIGKPILFMGVGQRYSDLQEFDVEWMIKKLF 366
>gi|336476487|ref|YP_004615628.1| signal recognition particle-docking protein FtsY [Methanosalsum
zhilinae DSM 4017]
gi|335929868|gb|AEH60409.1| signal recognition particle-docking protein FtsY [Methanosalsum
zhilinae DSM 4017]
Length = 350
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 147/236 (62%), Gaps = 11/236 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+E+AL L S +I + KP +VFVG+NG GK+T +AK+A +L + +
Sbjct: 126 VEQALRNALLKIMSANIFDFDEFIENADKPVNIVFVGINGTGKTTTIAKMANYLKKRGYT 185
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++AA DTFR+GA++QL H+++++V I + DPA V +A++ A N +DV+L DT
Sbjct: 186 PVLAAGDTFRAGAIDQLDIHSKKVEVKIIKHKEGGDPAAVIYDALEYAKANKADVILSDT 245
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ N LM L K+ +++PDLV+FV EA+ GNDAV++ S+FN+ +
Sbjct: 246 AGRLHTNVNLMSQLKKICRISSPDLVIFVDEAVAGNDAVERASQFNEAVP---------- 295
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDG +LTK D D K GAA+S+ Y++ P++F+G GQ Y DLKK + + V L +
Sbjct: 296 IDGSILTKIDA-DAKGGAAISIAYITNKPILFLGIGQGYDDLKKFDPEWFVNKLFE 350
>gi|21226912|ref|NP_632834.1| signal recognition particle subunit Ffh/SRP54 [Methanosarcina mazei
Go1]
gi|20905220|gb|AAM30506.1| signal recognition particle subunit Ffh/SRP54 [Methanosarcina mazei
Go1]
Length = 419
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 143/235 (60%), Gaps = 11/235 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+EEAL + + S + K + KP +VFVG+NG GK+T+++K+ + LL+ S
Sbjct: 193 VEEALKKAILDVVSANTFDFDEYVKNRPKPVHIVFVGINGTGKTTSISKMTHRLLKLGYS 252
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
V++AA DTFR+GA++QL HA RL V + + DPA V +A+Q A + D VL DT
Sbjct: 253 VVLAAGDTFRAGAIDQLGIHADRLGVKMIKHQAGADPAAVIYDAVQYAKAHNIDFVLSDT 312
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGRM N LM + K+ +++PDL++FV EA+ GNDAV++ ++FN +
Sbjct: 313 AGRMHTNMNLMAQMEKICRVSSPDLIIFVDEAVAGNDAVERAAQFNDAVP---------- 362
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D K GAA+S+ Y++G P++F G GQ Y DLKK + V L
Sbjct: 363 IDGSILTKIDA-DAKGGAAISIAYITGKPILFFGVGQGYEDLKKFEPEWFVDQLF 416
>gi|150400248|ref|YP_001324015.1| signal recognition particle-docking protein FtsY [Methanococcus
vannielii SB]
gi|150012951|gb|ABR55403.1| signal recognition particle-docking protein FtsY [Methanococcus
vannielii SB]
Length = 400
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 160/265 (60%), Gaps = 23/265 (8%)
Query: 335 LEPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSIDILRDVHAAKEQRKP 383
+E +++LK++L+ ++ A+++++ IL+ + ID+ + + K +++P
Sbjct: 135 VEKIIESLKNQLVGIKISSKDNPEEITFKALKKSIKEILSQDK-IDVFKIIDEKKAKKEP 193
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE 443
V++FVG+NG GK+T+++K+ Y L + S +MAA DTFR+GA+EQL H + + + +
Sbjct: 194 AVLLFVGINGTGKTTSISKLGYILKEKGYSAVMAAGDTFRAGAIEQLDEHGKNTGIRVIK 253
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVG 503
D A V +AI+ A G +VVL DTAGR N LM + K++ + PDLV+FVG
Sbjct: 254 HQKGADSAAVIYDAIEHAKARGINVVLADTAGRQTTNINLMDEIKKVVRVTKPDLVIFVG 313
Query: 504 EALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPV 563
++L GNDA+ Q +FN + I+G +LTK D D K GAALS+ Y P+
Sbjct: 314 DSLAGNDAISQAMEFNDAVN----------INGAILTKTDA-DAKGGAALSIAYSIKKPI 362
Query: 564 MFVGCGQSYTDLKKLNVKSIVKTLL 588
+F+G GQ Y+DL+K +V+ ++K L
Sbjct: 363 LFMGVGQKYSDLQKFDVEWMIKKLF 387
>gi|284161352|ref|YP_003399975.1| signal recognition particle-docking protein FtsY [Archaeoglobus
profundus DSM 5631]
gi|284011349|gb|ADB57302.1| signal recognition particle-docking protein FtsY [Archaeoglobus
profundus DSM 5631]
Length = 367
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 154/264 (58%), Gaps = 21/264 (7%)
Query: 335 LEPALKALKDRLMTK---------NVAAMEEALVRI-LTPRRSIDILRDVHAAKEQRKPY 384
+E + LKDRL+ + ++ E L+ + + R D V + ++++P
Sbjct: 112 VEEISRQLKDRLVGRRRKIGEKISDIVINELKLIILDILDRNRFDFDEFVESKLKEKRPL 171
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
+VFVGVNG GK+T +AKVA L+ SV++AA DTFR+GA+EQL H +RL V + +
Sbjct: 172 NIVFVGVNGTGKTTTIAKVAKRLIDFGYSVVLAAGDTFRAGAIEQLEEHGKRLGVKVIKH 231
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
DP V +A++ A G D+VL DTAGRM + L+ L+K+ + PDLV+FV E
Sbjct: 232 KQGADPCAVIYDALKHAESKGIDIVLADTAGRMHTKKNLIDQLAKIKRVTKPDLVIFVDE 291
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
++ GNDAV++ FN+ + IDG +LTK D D K G A+S+ YV+G P++
Sbjct: 292 SIAGNDAVERARMFNEAVG----------IDGTILTKIDA-DPKGGTAISISYVTGKPIL 340
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
F+G GQ Y DL K + + +V+ +
Sbjct: 341 FLGTGQGYDDLVKFDSRWLVERIF 364
>gi|386002422|ref|YP_005920721.1| Signal recognition particle-docking protein FtsY [Methanosaeta
harundinacea 6Ac]
gi|357210478|gb|AET65098.1| Signal recognition particle-docking protein FtsY [Methanosaeta
harundinacea 6Ac]
Length = 364
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 151/236 (63%), Gaps = 15/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ AL+++L+ R D+ D AK + KP +VFVGVNG GK+T++AKVA +L
Sbjct: 142 ALRSALLQVLSENR-FDV--DEFIAKAE-KPVKIVFVGVNGTGKTTSIAKVARYLKDRGY 197
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
S+++AA DTFR+GAVEQ+ HA +L+V + + KDPA V +A++ A + D+VL D
Sbjct: 198 SIVLAAGDTFRAGAVEQIEVHANKLEVKLVKHRDGKDPAAVIFDAVEYAKAHHRDIVLAD 257
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ N LM + K++ + +PDL++FV EA+ GNDAV++ FN+ +
Sbjct: 258 TAGRLHTNVNLMDQMKKIVRVVDPDLLIFVDEAIAGNDAVERARLFNEAVP--------- 308
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D K GAA+S+ ++G PV+F+G GQ Y DL K + +++ LL
Sbjct: 309 -IDGTILTKTDA-DAKGGAAISISSITGKPVLFLGIGQDYPDLVKFEPEWLLERLL 362
>gi|340623739|ref|YP_004742192.1| cell division protein FtsY [Methanococcus maripaludis X1]
gi|339904007|gb|AEK19449.1| cell division protein FtsY [Methanococcus maripaludis X1]
Length = 383
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 145/238 (60%), Gaps = 12/238 (5%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ A+++++ IL+ + ID+ + K +P V++FVG+NG GK+T+++K+AY L +
Sbjct: 145 INALKKSIKGILSQEK-IDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLAYILKEK 203
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
S +MAA DTFR+GA+EQL H + + + + D A V +AI A G +VVL
Sbjct: 204 GYSAVMAAGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYDAISHAKAKGLNVVL 263
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
DTAGR N LM + K++ + PDL++FVG++L GNDA+ Q +FN N
Sbjct: 264 ADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFN----------N 313
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
I+G +LTK D D K GAALS+ Y G P++F+G GQ Y+DL++ +V ++K L
Sbjct: 314 AININGAILTKTDA-DAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKLF 370
>gi|45358246|ref|NP_987803.1| signal recognition particle-docking protein FtsY [Methanococcus
maripaludis S2]
gi|44921003|emb|CAF30239.1| signal recognition particle receptor SRalpha [Methanococcus
maripaludis S2]
Length = 383
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 145/238 (60%), Gaps = 12/238 (5%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+ A+++++ IL+ + ID+ + K +P V++FVG+NG GK+T+++K+AY L +
Sbjct: 145 INALKKSIKGILSQEK-IDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLAYILKEK 203
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
S +MAA DTFR+GA+EQL H + + + + D A V +AI A G +VVL
Sbjct: 204 GYSAVMAAGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYDAISHAKAKGLNVVL 263
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
DTAGR N LM + K++ + PDL++FVG++L GNDA+ Q +FN N
Sbjct: 264 ADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFN----------N 313
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
I+G +LTK D D K GAALS+ Y G P++F+G GQ Y+DL++ +V ++K L
Sbjct: 314 TININGAILTKTDA-DAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKLF 370
>gi|330508423|ref|YP_004384851.1| signal recognition particle-docking protein FtsY [Methanosaeta
concilii GP6]
gi|328929231|gb|AEB69033.1| signal recognition particle-docking protein FtsY [Methanosaeta
concilii GP6]
Length = 388
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 147/236 (62%), Gaps = 15/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++ AL+ +L+ + +D + A + KP ++FVGVNG GK+T++AKVA +L+
Sbjct: 163 SLRNALITLLS-KNHLDFDEYIRA---KDKPVKILFVGVNGTGKTTSIAKVAKYLMDQSY 218
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++AA DTFR+GA+EQL H L + + + DPA V +AI+ A + DVVL D
Sbjct: 219 SVVLAAGDTFRAGAIEQLEVHGNNLGLKVVKHKTGGDPAAVIFDAIEYARAHNKDVVLAD 278
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ N LM + K++ + PDL++FV EA+ GNDAV++ FN+ S P
Sbjct: 279 TAGRLHTNINLMDQMRKIVRVTTPDLLIFVDEAIAGNDAVERARLFNE------SVP--- 329
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D K G+A+S+ Y++G PV+F+G GQ+Y DL K + +V L+
Sbjct: 330 -IDGSILTKTDA-DAKGGSAISIAYITGKPVLFLGVGQTYPDLVKFEPEWLVNRLM 383
>gi|327401640|ref|YP_004342479.1| signal recognition particle-docking protein FtsY [Archaeoglobus
veneficus SNP6]
gi|327317148|gb|AEA47764.1| signal recognition particle-docking protein FtsY [Archaeoglobus
veneficus SNP6]
Length = 376
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 11/215 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
+ A +++KP ++FVGVNG GK+T +AK+A L SV++AA DTFR+GA+EQL H
Sbjct: 172 IEEALKEKKPLNIIFVGVNGTGKTTTIAKLAKRLTDRGYSVVLAAGDTFRAGAIEQLEEH 231
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
A RL V + + DPA V +AI A G DVVL DTAGRM + L+ L K+ +
Sbjct: 232 ANRLGVKLIKHKAGADPAAVIYDAIAHAESKGIDVVLADTAGRMHTKKNLIDQLEKIKRV 291
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
PDL +FV E++ GNDAV++ FN+ + IDG +LTK D D K G A+
Sbjct: 292 TKPDLTIFVDESIAGNDAVERARMFNEAVG----------IDGSILTKLDA-DPKGGTAI 340
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ YV+G PV+F+G GQ Y DL K + ++K +
Sbjct: 341 SISYVTGKPVLFIGVGQEYDDLVKFDSDWLIKRIF 375
>gi|298674678|ref|YP_003726428.1| signal recognition particle-docking protein FtsY [Methanohalobium
evestigatum Z-7303]
gi|298287666|gb|ADI73632.1| signal recognition particle-docking protein FtsY [Methanohalobium
evestigatum Z-7303]
Length = 359
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 140/236 (59%), Gaps = 11/236 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+E+AL + L S + K KP +VFVGVNG GK+T +AK+A L S
Sbjct: 135 VEDALKKSLYNIMSANTFDFDEYLKNAEKPVHIVFVGVNGTGKTTTIAKMANLLQNDNYS 194
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++AA DTFR+GA++Q+ +HA ++ + + DPA V +A+Q A DVVL DT
Sbjct: 195 TVIAAGDTFRAGAIDQIESHANKINTKLIKHQEMGDPAAVVYDAVQYAKSRSIDVVLSDT 254
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGRM N LM L K+ +++PDL++FV EA+ GNDAV++ +FN +
Sbjct: 255 AGRMHTNVNLMSQLEKVCRVSSPDLIIFVDEAVAGNDAVERAQQFNDNIP---------- 304
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDG +LTK D D K GAA+S+ Y++G P++++G GQ Y DLKK + + V L +
Sbjct: 305 IDGSILTKADA-DSKGGAAISIAYITGKPILYLGIGQGYEDLKKFDPQWFVDQLFE 359
>gi|282162678|ref|YP_003355063.1| putative signal recognition particle receptor [Methanocella
paludicola SANAE]
gi|282154992|dbj|BAI60080.1| putative signal recognition particle receptor [Methanocella
paludicola SANAE]
Length = 347
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 131/212 (61%), Gaps = 11/212 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K KP +VVF GVNG GK+T +AK+A L + V V++AA DTFR+GA+EQL+ HA RL
Sbjct: 146 KGHDKPVIVVFTGVNGTGKTTTIAKLAERLKESNVGVVIAAGDTFRAGAIEQLQKHADRL 205
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
V + + DPA V +A+ A N DVVL DTAGR+ N LM L K+ + PD
Sbjct: 206 GVKMIKHDQGSDPAAVIYDAVAYAKSNKKDVVLADTAGRLHTNVNLMEQLKKISRIIRPD 265
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
LV+FV EA+ GNDAV++ FN + I G +LTK D D K GAA+S+ +
Sbjct: 266 LVIFVDEAIAGNDAVERAKLFNDAVP----------ISGSILTKADA-DSKGGAAISIAH 314
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
++G P++F+G GQ Y DL+K + V+ LL+
Sbjct: 315 ITGKPILFLGVGQEYKDLRKFDPDWFVERLLE 346
>gi|91772186|ref|YP_564878.1| signal recognition particle-docking protein FtsY [Methanococcoides
burtonii DSM 6242]
gi|91711201|gb|ABE51128.1| signal recognition docking protein FtsY [Methanococcoides burtonii
DSM 6242]
Length = 366
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 152/255 (59%), Gaps = 30/255 (11%)
Query: 335 LEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGV 394
+E AL++ ++M+ NV ++ D +RD KP +VF+G+NG
Sbjct: 142 VENALRSAIYKVMSANVFDLD-------------DYIRDA------EKPVHIVFIGINGT 182
Query: 395 GKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
GK+T ++K+A L K SV++AA DTFR+GA++Q+ HA R+ V + + DPA V
Sbjct: 183 GKTTTISKMAKRLKDMKYSVVIAAGDTFRAGAIDQIAIHAERIGVKLIKHQEGGDPAAVV 242
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
+A+Q A + DVVL DTAGRM N LM L K+ +++PDL++FV EA+ GNDAV++
Sbjct: 243 YDAVQHAKAHNVDVVLSDTAGRMHTNVNLMAQLEKVCRVSSPDLIIFVDEAVAGNDAVER 302
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
+FN ++ P I G +LTK D D K GAA+S+ Y++G P++F+G GQ Y D
Sbjct: 303 AQQFN------TAVP----IHGSILTKTDA-DSKGGAAISIAYITGKPILFLGMGQGYDD 351
Query: 575 LKKLNVKSIVKTLLK 589
LKK + + V L +
Sbjct: 352 LKKFDPEWFVDQLFE 366
>gi|116754856|ref|YP_843974.1| signal recognition particle-docking protein FtsY [Methanosaeta
thermophila PT]
gi|116666307|gb|ABK15334.1| signal recognition particle-docking protein FtsY [Methanosaeta
thermophila PT]
Length = 379
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 159/275 (57%), Gaps = 34/275 (12%)
Query: 318 SSMFQSIAG---KANLDKADL-EPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRD 373
SS+ S+ G K D DL E AL+A ++++KNV +E +
Sbjct: 133 SSVKSSLVGSKKKIGSDTGDLVESALRAALLKVLSKNVFDFDEFI--------------- 177
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
K KP ++FVGVNG GK+T++AKVA +L + SV++AA DTFR+GA+EQL TH
Sbjct: 178 ----KNTPKPVKILFVGVNGTGKTTSIAKVARYLKERGYSVVLAAGDTFRAGAIEQLETH 233
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
+RL + + + DPA V +AI+ A + DVVL DTAGR+ N LM + K++ +
Sbjct: 234 GQRLDLKVIKHKTGGDPAAVIFDAIEYAKAHKKDVVLADTAGRLHTNINLMDQMKKIVRV 293
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
PD+++FV EA+ GNDAV++ FN+ + I G +LTK D D K G+A+
Sbjct: 294 TKPDMLIFVDEAIAGNDAVERARLFNESVP----------ITGTILTKTDA-DAKGGSAI 342
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ +V+G P++F+G GQ Y DL K + +V LL
Sbjct: 343 SIAHVTGKPIIFLGVGQDYPDLVKFDPVWLVDRLL 377
>gi|429217643|ref|YP_007175633.1| signal recognition particle-docking protein FtsY [Caldisphaera
lagunensis DSM 15908]
gi|429134172|gb|AFZ71184.1| signal recognition particle-docking protein FtsY [Caldisphaera
lagunensis DSM 15908]
Length = 304
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 134/220 (60%), Gaps = 11/220 (5%)
Query: 369 DILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 428
DI+ + + +P+V+VF+G+NGVGK+T +AK + L ++ +SV++A DTFR+GA E
Sbjct: 95 DIITKIKNKCSKNEPFVIVFLGINGVGKTTTIAKFSNVLKKNNISVVIAGADTFRAGAQE 154
Query: 429 QLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
Q+ HA+RL +PI + Y DPA VA AI A G VL+DTAGRM + LM L
Sbjct: 155 QIDVHAKRLDIPIIKGQYGGDPASVAYNAILYAKSRGICTVLIDTAGRMHSDVDLMEELK 214
Query: 489 KLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
K+I + PD+ + V +AL GNDAV+Q FN + ID I++TK D D K
Sbjct: 215 KIIRVTKPDMKVLVVDALTGNDAVEQARLFNDNIG----------IDAIIITKIDA-DVK 263
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G A+S+ ++ P++++G GQSY DLKK + K V L
Sbjct: 264 GGVAISVSSITKKPIIYLGYGQSYEDLKKFDPKEYVNNLF 303
>gi|146304394|ref|YP_001191710.1| signal recognition particle-docking protein FtsY [Metallosphaera
sedula DSM 5348]
gi|145702644|gb|ABP95786.1| signal recognition particle-docking protein FtsY [Metallosphaera
sedula DSM 5348]
Length = 373
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 20/250 (8%)
Query: 339 LKALKDRLMTKNVAAME--EALVRILTPRRSIDILRD-------VHAAKEQRKPYVVVFV 389
L+ LK+ L+ + V+ E E L++ + +ILR + K +KPYV+VF
Sbjct: 125 LEDLKNTLVGQKVSRRENIEELIQESLKKSLREILRKNYRERDMIETIKSSKKPYVIVFF 184
Query: 390 GVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKD 449
GVNGVGK+T +AK A L ++ +SV++AA DTFR+ A EQL HA +L+VP+ + Y D
Sbjct: 185 GVNGVGKTTTIAKFAMLLRKNGLSVIIAASDTFRAAAQEQLAYHATKLEVPLVKGKYGGD 244
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
PA VA +AIQ A G DVVLVDTAGRM ++ L L +++ + PDL + V ++L GN
Sbjct: 245 PASVAFDAIQSAKSRGIDVVLVDTAGRMHTDKDLTEELKRVVRVAKPDLKILVLDSLAGN 304
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
DA+ Q F + + D ++LTK D D K G ALS+ Y G PV+++G G
Sbjct: 305 DALQQAEYFEKNVG----------YDAVILTKVDA-DAKGGVALSLAYKLGKPVIYLGMG 353
Query: 570 QSYTDLKKLN 579
Q Y L K +
Sbjct: 354 QDYESLIKFD 363
>gi|304313969|ref|YP_003849116.1| signal recognition particle protein [Methanothermobacter
marburgensis str. Marburg]
gi|302587428|gb|ADL57803.1| predicted signal recognition particle protein [Methanothermobacter
marburgensis str. Marburg]
Length = 359
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 141/220 (64%), Gaps = 12/220 (5%)
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
EAL + + S+D ++ + E+RKP V++FVG+NG GK+T +AKVA + ++ + +
Sbjct: 138 EALKKAVMDVLSVDGVK-IRELAEKRKPLVIMFVGINGTGKTTTIAKVARYFMKMGLEPV 196
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
MAA DTFR+GA+EQ+ HA +L V I DPA VA +A+ A G DVVL+DTAG
Sbjct: 197 MAAADTFRAGAIEQIHEHADKLGVKIISHRKGADPAAVAFDAVSHAKAQGKDVVLIDTAG 256
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
RMQ N LM ++K+ + PDL+LFVG+AL GNDA++Q +KF++ + ID
Sbjct: 257 RMQTNVNLMDEMAKIKRVVKPDLILFVGDALTGNDAIEQATKFDEAVG----------ID 306
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
++LTK D + GAALS+ Y+ P++F+G GQ Y D+
Sbjct: 307 AVILTK-ADADARGGAALSIGYMIRKPIIFLGTGQGYDDI 345
>gi|148508292|gb|ABQ76076.1| signal recognition particle receptor SRalpha [uncultured
haloarchaeon]
Length = 413
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P +VF GVNGVGK+T++AK+ +L +SV+MA DT+R+GA EQ+R HA+ L +
Sbjct: 213 PMTIVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIREHAKTLDTKLI 272
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
DPA V +A++ A N DVVL DTAGR+ + LM L K+ + NPD+ LFV
Sbjct: 273 AHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVNPDMTLFV 332
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ YV+G P
Sbjct: 333 DEAVAGQDAVERAKQFNEAAE----------IDGTVLTKADA-DSNGGAAISIAYVTGKP 381
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
++F+G GQ Y D+++ + KS+V LL
Sbjct: 382 ILFLGVGQEYDDIERFDPKSMVNQLL 407
>gi|385804857|ref|YP_005841257.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi
C23]
gi|339730349|emb|CCC41678.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi
C23]
Length = 413
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P +VF GVNGVGK+T++AK+ +L +SV+MA DT+R+GA EQ+R HA+ L +
Sbjct: 213 PMTIVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIREHAKTLDTRLI 272
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
DPA V +A++ A N DVVL DTAGR+ + LM L K+ + NPD+ LFV
Sbjct: 273 AHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVNPDMTLFV 332
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ YV+G P
Sbjct: 333 DEAVAGQDAVERAKQFNEAAE----------IDGTVLTKADA-DSNGGAAISIAYVTGKP 381
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
++F+G GQ Y D+++ N +S+V LL
Sbjct: 382 ILFLGVGQEYDDIERFNPESMVNQLL 407
>gi|110669293|ref|YP_659104.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi
DSM 16790]
gi|109627040|emb|CAJ53516.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi
DSM 16790]
Length = 413
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P +VF GVNGVGK+T++AK+ +L +SV+MA DT+R+GA EQ+R HA+ L +
Sbjct: 213 PVTIVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIREHAKTLDTKLI 272
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
DPA V +A++ A N DVVL DTAGR+ + LM L K+ + NPD+ LFV
Sbjct: 273 AHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVNPDMTLFV 332
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ YV+G P
Sbjct: 333 DEAVAGQDAVERAKQFNEAAE----------IDGTVLTKADA-DSNGGAAISIAYVTGKP 381
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
++F+G GQ Y D+++ + KS+V LL
Sbjct: 382 ILFLGVGQEYDDIERFDPKSMVNQLL 407
>gi|390938929|ref|YP_006402667.1| signal recognition particle-docking protein FtsY [Desulfurococcus
fermentans DSM 16532]
gi|390192036|gb|AFL67092.1| signal recognition particle-docking protein FtsY [Desulfurococcus
fermentans DSM 16532]
Length = 296
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 15/238 (6%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
V A+ E L+ T SID+L + RKP +VF+GVNGVGK+T +AKVA ++ ++
Sbjct: 70 VKALREILLSYFTGLNSIDLL----SLASSRKPLKIVFLGVNGVGKTTTIAKVAVYMREN 125
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+M A DTFR+GA EQL+ H+ R +P+F Y DPA + +AIQ G +V L
Sbjct: 126 GFKPLMVAADTFRAGAQEQLKIHSERTGIPVFTGKYGSDPAALVYDAIQYGLNRGFNVFL 185
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGRM + L+ L K++ + PD+ + V +AL GNDA++Q FN+ +
Sbjct: 186 IDTAGRMHVDVDLVNELKKIVRVAKPDVKILVVDALTGNDALEQARFFNEAVG------- 238
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+D +++TK D ++ G LS+VY+ PV+F+G GQ Y DLK N V+ +L
Sbjct: 239 ---VDCVVVTKVDAYEEG-GVPLSLVYILKKPVLFIGVGQDYKDLKPFNPIEYVERIL 292
>gi|20095049|ref|NP_614896.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
gi|19888325|gb|AAM02826.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
Length = 349
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 141/224 (62%), Gaps = 11/224 (4%)
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
EAL+ +L P++ +D++ V A++ +P +++FVGVNG GK+T +AKVA L H SV+
Sbjct: 123 EALLSVLEPKKEVDLMETVEKARQDGRPAIIMFVGVNGSGKTTTIAKVAKLLKDHGYSVV 182
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+AA DTFR+ A+EQL HA RL V + + DP VA A+Q A G DVVLVDTAG
Sbjct: 183 IAAADTFRAAAIEQLEEHAERLGVTLIKGERGDDPTAVAFNAVQHAEAKGKDVVLVDTAG 242
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R + LM L K+ + PDLV+FVG+AL GNDA++Q F++ + ID
Sbjct: 243 RAYTDVNLMEELKKMKRVLEPDLVVFVGDALAGNDAIEQAKTFHEYVG----------ID 292
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+LTK D D K GA LS+ V+GAP++++G GQ Y DLK +
Sbjct: 293 CAILTKVDA-DAKGGAVLSISKVTGAPILYLGVGQDYDDLKAFS 335
>gi|218884418|ref|YP_002428800.1| putative signal recognition particle protein [Desulfurococcus
kamchatkensis 1221n]
gi|218766034|gb|ACL11433.1| Probable signal recognition particle protein [Desulfurococcus
kamchatkensis 1221n]
Length = 296
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 141/238 (59%), Gaps = 15/238 (6%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
V A+ E L+ T SID+L + RKP +VF+GVNGVGK+T +AKVA ++ ++
Sbjct: 70 VKALREILLSYFTGLNSIDLL----SLANSRKPLKLVFLGVNGVGKTTTIAKVAVYMREN 125
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ +M A DTFR+GA EQL+ H+ R +P+F Y DPA + +AIQ G +V L
Sbjct: 126 GLKPLMVAADTFRAGAQEQLKIHSERTGIPVFTGKYGSDPAALVYDAIQYGLNRGFNVFL 185
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGRM + L+ L K++ + PD+ + V +AL GNDA++Q FN+ +
Sbjct: 186 IDTAGRMHVDVDLVNELKKIVRVAKPDVKILVVDALTGNDALEQARFFNEAVG------- 238
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+D +++TK D ++ G LS+VY+ PV+F+G GQ Y DLK N V+ +L
Sbjct: 239 ---VDCVVVTKVDAYEEG-GVPLSLVYILKKPVLFIGVGQDYKDLKPFNPIEYVERIL 292
>gi|383318887|ref|YP_005379728.1| signal recognition particle-docking protein FtsY [Methanocella
conradii HZ254]
gi|379320257|gb|AFC99209.1| signal recognition particle-docking protein FtsY [Methanocella
conradii HZ254]
Length = 323
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 174/334 (52%), Gaps = 40/334 (11%)
Query: 284 MMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALK 343
M DK V ++ D+++ +P A+K G G+ L + DLE L L+
Sbjct: 1 MFDKLRVKLNEFRKAIDDKLKAAPQP-AEKAGILDKAVAITKGEVILTEKDLEGPLWELE 59
Query: 344 DRLMTKNVA-AMEEALV------------RILTPRRSI--DILRD-------VHA----- 376
L+ +VA + E+++ R+L+ + D LRD H
Sbjct: 60 MALLESDVALPVAESIIDSVKKGLSGQRKRLLSSTGDLVEDALRDSLLGILSAHTLDFEE 119
Query: 377 -AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHAR 435
K KP VVF GVNG GK+T +AK+A L + V++AA DTFR+GA+EQL HA
Sbjct: 120 YVKAHEKPVTVVFTGVNGTGKTTTIAKLAELLKEKGYGVVIAAGDTFRAGAIEQLEKHAD 179
Query: 436 RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
RL V + + DPA V +A+ A N DVVL DTAGR+ N LM L K+ +
Sbjct: 180 RLGVKLIKHQQGSDPAAVIYDAVAYARSNRKDVVLADTAGRLHTNVNLMEQLKKISRVIK 239
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PDLV+FV EA+ GNDAV++ FN + I G +LTK D D K GAA+S+
Sbjct: 240 PDLVIFVDEAIAGNDAVERARLFNDAVP----------ISGSILTKADA-DSKGGAAISI 288
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+++G P++++G GQ Y DLKK + + V LL+
Sbjct: 289 AHITGKPILYLGIGQGYKDLKKFDPEWFVDRLLE 322
>gi|320101305|ref|YP_004176897.1| signal recognition particle-docking protein FtsY [Desulfurococcus
mucosus DSM 2162]
gi|319753657|gb|ADV65415.1| signal recognition particle-docking protein FtsY [Desulfurococcus
mucosus DSM 2162]
Length = 296
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%), Gaps = 15/229 (6%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
V A+ E L+ T ++D++ + RKP+ +VF+GVNGVGK+T +AK+A ++ +
Sbjct: 70 VEALREILLGYFTNLGALDLV----SLARSRKPFKIVFLGVNGVGKTTTIAKIAVYMRGN 125
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+M A DTFR+GA EQL+ H+ R +P+F Y DPA +A +A+Q G DV L
Sbjct: 126 GFKPLMVAADTFRAGAQEQLKIHSERTGIPVFTGRYGWDPAALAYDAVQYGVGRGFDVFL 185
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGRM + L+ L K++ + P++ + V +AL GNDAV+Q FN+ +
Sbjct: 186 IDTAGRMHVDVDLVNELKKVVRVVKPNVKILVVDALTGNDAVEQARFFNEAVG------- 238
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+DG+++TK D ++ G LS+ YV G P++FVG GQ Y DLK N
Sbjct: 239 ---VDGVVVTKVDAYEEG-GVPLSLAYVLGKPILFVGVGQDYKDLKPFN 283
>gi|302348911|ref|YP_003816549.1| signal recognition particle protein [Acidilobus saccharovorans
345-15]
gi|302329323|gb|ADL19518.1| Probable signal recognition particle protein [Acidilobus
saccharovorans 345-15]
Length = 304
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 129/221 (58%), Gaps = 11/221 (4%)
Query: 368 IDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 427
ID++ + PYV+ F GVNGVGK+T +AKVAY L ++ ++AA DTFR+GA
Sbjct: 93 IDLVSEAKRKCSSGLPYVITFFGVNGVGKTTTIAKVAYMLKSSGLTPVIAAADTFRAGAQ 152
Query: 428 EQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
EQLRTHA RL V Y DPA VA AI A VL+DTAGRM + LM L
Sbjct: 153 EQLRTHAERLGVAFIGGSYGADPASVAYNAINYAKNRRVCAVLIDTAGRMHVDADLMSEL 212
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
K++ + NPDL + V ++L GNDAV+Q FN+ + ID I+LTK D D
Sbjct: 213 KKIVRVANPDLRVLVVDSLTGNDAVEQAKSFNENVG----------IDAIILTKLDA-DL 261
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
K G A+S+ + PV++VG GQ+Y+DL+ + I+ +
Sbjct: 262 KGGVAISVAATTKKPVIYVGVGQNYSDLRPFSPNYIISAIF 302
>gi|1217621|emb|CAA65233.1| signal recognition particle receptor [Acidianus ambivalens]
Length = 374
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 132/207 (63%), Gaps = 11/207 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
+ K KPYV++F GVNGVGK+T +AKVAY L + + V+++A DTFR+ A EQL H
Sbjct: 170 IEEIKRSPKPYVIMFFGVNGVGKTTTIAKVAYMLKKAGLKVIVSASDTFRAAAQEQLAIH 229
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
++L++P+ + Y DPA VA +AIQ A G DVVL+DTAGRM ++ L L +++ +
Sbjct: 230 CQKLEIPLVKGKYGGDPASVAFDAIQAAKSRGIDVVLIDTAGRMHVDKDLTEELKRIVRI 289
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
+ P+L L V +AL GNDA++Q +K+ + + D DG++LTK D D K G L
Sbjct: 290 SKPNLKLLVIDALAGNDALEQ-AKYFENVVDY---------DGVILTKVDA-DAKGGVVL 338
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNV 580
S+ Y PV+F+G GQ+Y DL +V
Sbjct: 339 SLAYELKKPVIFLGTGQNYDDLIPFSV 365
>gi|452206290|ref|YP_007486412.1| signal recognition particle receptor FtsY [Natronomonas moolapensis
8.8.11]
gi|452082390|emb|CCQ35647.1| signal recognition particle receptor FtsY [Natronomonas moolapensis
8.8.11]
Length = 359
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 146/250 (58%), Gaps = 25/250 (10%)
Query: 349 KNVAAMEEALVRILTPRRSIDILRDVHAAK----EQR-----KPYVVVFVGVNGVGKSTN 399
K V + E+ + R + D LRDV + E+R KP V+VF GVNGVGK+T+
Sbjct: 124 KQVESGEQVIERAIG-----DALRDVISVGQFDFEERLRSAEKPVVIVFTGVNGVGKTTS 178
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
+AK++ WL +S +MA DT+R+GA EQ+ HA L I DPA V +A++
Sbjct: 179 IAKLSRWLESRGLSSVMANGDTYRAGANEQIEEHAEALDTRIITHEQGGDPAAVIYDAVE 238
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A NG DVVL DTAGR+ + LM L K+ + +PD+ LFV EA+ G DA ++ +F+
Sbjct: 239 YADANGVDVVLGDTAGRLHTSNDLMAQLEKIDRVVDPDMTLFVDEAVAGQDATNRAEEFD 298
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ IDG +LTK D D + GAA+S+ +V+G P++F+G GQSY D+++ +
Sbjct: 299 ----------DAAEIDGTVLTKADA-DSQGGAAISIAHVTGKPILFLGTGQSYEDIERFD 347
Query: 580 VKSIVKTLLK 589
IV LL+
Sbjct: 348 PDEIVDRLLR 357
>gi|156937965|ref|YP_001435761.1| signal recognition particle-docking protein FtsY [Ignicoccus
hospitalis KIN4/I]
gi|156566949|gb|ABU82354.1| signal recognition particle-docking protein FtsY [Ignicoccus
hospitalis KIN4/I]
Length = 340
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 138/222 (62%), Gaps = 11/222 (4%)
Query: 367 SIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGA 426
+ D++ + A+ + + ++F+GVNGVGK+T +AKVAY + + V+ ++AA DTFR+GA
Sbjct: 126 AFDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIAKVAYAMKRAGVTPVLAAADTFRAGA 185
Query: 427 VEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRA 486
VEQL+ HA R+ VPI K Y DPA VA +AI+ A G +VVL+DTAGRM + LM
Sbjct: 186 VEQLKVHAERMGVPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDVDLMNE 245
Query: 487 LSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTID 546
L K+ + PD + V +AL GNDAV+Q F++ + +D ++LTK D D
Sbjct: 246 LRKVARVAEPDYKVLVLDALTGNDAVEQAKFFDEAVG----------VDAVILTKVDA-D 294
Query: 547 DKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
K GA LS+ PV+++G GQ+Y DL K + K V+ LL
Sbjct: 295 AKGGAVLSVAATIKKPVLYLGVGQNYEDLIKFDPKWFVERLL 336
>gi|330834459|ref|YP_004409187.1| signal recognition particle-docking protein FtsY [Metallosphaera
cuprina Ar-4]
gi|329566598|gb|AEB94703.1| signal recognition particle-docking protein FtsY [Metallosphaera
cuprina Ar-4]
Length = 378
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 148/262 (56%), Gaps = 20/262 (7%)
Query: 336 EPALKALKDRLMTKNVAAME--EALVRILTPRRSIDILRD-------VHAAKEQRKPYVV 386
E L+ LK L+ K V+ E E L+ + DIL+ V K +KP+VV
Sbjct: 127 EKILEDLKRNLVGKKVSRKENLEQLIHESLKKSLKDILKKNYIEKDVVETIKTSKKPFVV 186
Query: 387 VFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 446
+F GVNGVGK+T +AK A L + +SV++AA DTFR+ A EQL HA +L+VP+ + Y
Sbjct: 187 MFFGVNGVGKTTTIAKFAMLLKKSGLSVIIAASDTFRAAAQEQLAVHASKLEVPLVKGKY 246
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
DPA VA +AIQ A G D VL+DTAGRM ++ L+ L +L+ + P+L + V ++L
Sbjct: 247 GGDPASVAFDAIQSAKSRGIDAVLIDTAGRMHTDKDLVEELRRLVRIAKPNLKVLVLDSL 306
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
GNDA+ Q F + + D ++LTK D D K G ALS+ Y G PVM++
Sbjct: 307 AGNDALKQAEYFEKAVG----------YDFVILTKVDA-DAKGGIALSLAYELGKPVMYL 355
Query: 567 GCGQSYTDLKKLNVKSIVKTLL 588
G GQ Y L K N + LL
Sbjct: 356 GMGQDYDSLVKFNPDWFTERLL 377
>gi|448529194|ref|ZP_21620453.1| cell division protein FtsY [Halorubrum hochstenium ATCC 700873]
gi|445709627|gb|ELZ61453.1| cell division protein FtsY [Halorubrum hochstenium ATCC 700873]
Length = 363
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 141/237 (59%), Gaps = 15/237 (6%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
AA+ +ALV ++ + D + E KP +VF GVNGVGK+T++AK++ WL
Sbjct: 139 AALHDALVDVIAVGQ-FDFEERI---AEADKPVTIVFTGVNGVGKTTSIAKLSEWLADRG 194
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
S ++A DT+R+GA EQ+R HA RL + DPA V + ++ A N DVVL
Sbjct: 195 YSSVLANGDTYRAGANEQIREHADRLGRDLISHDQGGDPAAVIYDGVEYAEANDVDVVLG 254
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ ++ LM L K+ + +PD+ +FV EA+ G DAV++ +FN A
Sbjct: 255 DTAGRLHTSDDLMAQLEKIDRVVDPDMTIFVDEAVAGQDAVNRAKEFNDAAA-------- 306
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D GAA+S+ YV+G P++F+G GQ Y DL + +++V++LL
Sbjct: 307 --IDGAILTKADA-DSSGGAAISVAYVTGKPILFLGTGQGYDDLALFDPEALVESLL 360
>gi|448473436|ref|ZP_21601578.1| cell division protein FtsY [Halorubrum aidingense JCM 13560]
gi|445818948|gb|EMA68797.1| cell division protein FtsY [Halorubrum aidingense JCM 13560]
Length = 369
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S +MA DT+R+GA EQ+R HA RL
Sbjct: 168 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVMANGDTYRAGANEQIREHADRLD 227
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 228 RELISHDQGGDPAAVIYDGVEYAEANDIDVVLGDTAGRLHTSDDLMAQLEKIDRVVDPDM 287
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 288 TLFVDEAVAGQDAVNRAKEFNDAAA----------IDGAILTKADA-DSSGGAAISVAYV 336
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y DL + +V +LL
Sbjct: 337 TGKPILFLGTGQGYDDLTLFQPEELVASLL 366
>gi|374723681|gb|EHR75761.1| signal recognition particle-docking protein FtsY [uncultured marine
group II euryarchaeote]
Length = 473
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 122/197 (61%), Gaps = 11/197 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P VV+ VGVNG GK+T AK+A+ LL SV+ AA DTFR+GA++QL +H L +
Sbjct: 278 PVVVMLVGVNGTGKTTTAAKIAHRLLGSGRSVIAAAGDTFRAGAIQQLESHCENLGIRCV 337
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
D A +A++AI+ A G DVVLVDTAGRMQ+ LM L+K+ + NP L LFV
Sbjct: 338 SSQRGGDTAAIARDAIESARAKGVDVVLVDTAGRMQNKVNLMNELNKVRRVANPHLTLFV 397
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
G++L GNDAV+Q F + + DG +LTK DT D K GA LS+ + +G P
Sbjct: 398 GDSLAGNDAVEQARMFQEIMK----------FDGAVLTKVDT-DAKGGAGLSIAFATGRP 446
Query: 563 VMFVGCGQSYTDLKKLN 579
++F G GQ Y DLK+ +
Sbjct: 447 IVFAGVGQGYDDLKQFD 463
>gi|332796973|ref|YP_004458473.1| signal recognition particle-docking protein FtsY [Acidianus
hospitalis W1]
gi|332694708|gb|AEE94175.1| signal recognition particle-docking protein FtsY [Acidianus
hospitalis W1]
Length = 308
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 132/203 (65%), Gaps = 11/203 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K+ KPYV++F GVNGVGK+T +AKVAY L + + V+++A DTFR+ A EQL H ++L
Sbjct: 108 KKSPKPYVIMFFGVNGVGKTTTIAKVAYMLKKAGLKVIVSASDTFRAAAQEQLAIHCQKL 167
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
++P+ + Y DPA VA +AIQ A G DVVL+DTAGRM ++ L L +++ ++ P+
Sbjct: 168 EIPLVKGKYGGDPASVAFDAIQAAKSRGIDVVLIDTAGRMHVDKDLTEELKRIVRISKPN 227
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L L V +AL GNDA++Q +K+ + + D DG++LTK D D K G LS+ Y
Sbjct: 228 LKLLVIDALAGNDALEQ-AKYFENVVDY---------DGVILTKVDA-DAKGGVVLSLAY 276
Query: 558 VSGAPVMFVGCGQSYTDLKKLNV 580
PV+F+G GQ+Y DL +V
Sbjct: 277 ELKKPVIFLGTGQNYDDLIPFSV 299
>gi|385773728|ref|YP_005646295.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus HVE10/4]
gi|385776364|ref|YP_005648932.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus REY15A]
gi|323475112|gb|ADX85718.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus REY15A]
gi|323477843|gb|ADX83081.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus HVE10/4]
Length = 310
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 154/264 (58%), Gaps = 25/264 (9%)
Query: 336 EPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPY 384
E L+ LK+ ++ K V ++++++ I+T + +++L ++ K+ KPY
Sbjct: 60 EKILEDLKENIIGKKVRRSEDLERIVKDSLKKSITEIITKNKPMNVLEEI---KKSTKPY 116
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL HAR L++P+ +
Sbjct: 117 IIIFFGINGVGKTTTIAKFAYMLKKNGLSCIISASDTFRAAAQEQLEIHARNLEIPLIKG 176
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA VA +AI+ A G DVVL+DTAGRM + L+ L +++ + P+L + V +
Sbjct: 177 KYGGDPASVAYDAIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNITRPNLKILVLD 236
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L GNDA++Q F + D ++LTK D D K G LS+ Y PV
Sbjct: 237 SLGGNDALEQAKYFENNVG----------FDLVILTKVDA-DVKGGVILSLAYELNKPVG 285
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
++G GQ+Y DL N + ++ L
Sbjct: 286 YLGVGQTYDDLIPFNAEWFIQRLF 309
>gi|448502542|ref|ZP_21612655.1| cell division protein FtsY [Halorubrum coriense DSM 10284]
gi|445694037|gb|ELZ46172.1| cell division protein FtsY [Halorubrum coriense DSM 10284]
Length = 361
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S ++A DT+R+GA EQ+R HA RL
Sbjct: 160 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVLANGDTYRAGANEQIREHADRLG 219
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 220 RDLISHDQGGDPAAVIYDGVEYAEANDVDVVLGDTAGRLHTSDDLMAQLEKIDRVVDPDM 279
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 280 TLFVDEAVAGQDAVNRAKEFNDAAA----------IDGAILTKADA-DSSGGAAISVAYV 328
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+ + + +V++LL
Sbjct: 329 TGKPILFLGTGQGYDDITLFDPEDLVESLL 358
>gi|60620671|ref|NP_341888.2| signal recognition particle receptor protein [Sulfolobus
solfataricus P2]
gi|384433799|ref|YP_005643157.1| signal recognition particle-docking protein FtsY [Sulfolobus
solfataricus 98/2]
gi|261601953|gb|ACX91556.1| signal recognition particle-docking protein FtsY [Sulfolobus
solfataricus 98/2]
Length = 358
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 154/264 (58%), Gaps = 25/264 (9%)
Query: 336 EPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPY 384
E L+ LK+ ++ K V ++++++ I+T +I++L ++ K+ KPY
Sbjct: 108 EKILEDLKENIIGKKVKRSDDLERIVKDSLKKSITEIITKNNAINVLEEI---KKSPKPY 164
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL H+R L++P+ +
Sbjct: 165 IIIFFGINGVGKTTTIAKFAYMLKKNGLSCIISASDTFRAAAQEQLEVHSRNLEIPLIKG 224
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA VA +AI+ A G DVVL+DTAGRM + L+ L +++ + P+L + V +
Sbjct: 225 RYGGDPASVAFDAIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNIAKPNLKILVLD 284
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L GNDA++Q F + D ++LTK D D K G LS+ Y PV
Sbjct: 285 SLGGNDALEQAKYFENNVG----------FDLVILTKVDA-DVKGGVILSLAYELNKPVG 333
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
++G GQ+Y DL N + ++ L
Sbjct: 334 YLGIGQAYDDLIPFNAEWFIQRLF 357
>gi|238620250|ref|YP_002915076.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus M.16.4]
gi|238381320|gb|ACR42408.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus M.16.4]
Length = 310
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 154/264 (58%), Gaps = 25/264 (9%)
Query: 336 EPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPY 384
E L+ LK+ ++ K V ++++++ I+T + +++L ++ K+ KPY
Sbjct: 60 EKILEDLKENIIGKKVRRSEDLERIVKDSLKKSITEIITKNKPMNVLEEI---KKSTKPY 116
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL HAR L++P+ +
Sbjct: 117 IIIFFGINGVGKTTTIAKFAYMLKKNGLSCIISASDTFRAAAQEQLEIHARNLEIPLIKG 176
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA VA +AI+ A G DVVL+DTAGRM + L+ L +++ + P+L + V +
Sbjct: 177 KYGGDPASVAYDAIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNITRPNLKILVLD 236
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L GNDA++Q F + D ++LTK D D K G LS+ Y PV
Sbjct: 237 SLGGNDALEQAKYFENNVG----------FDLVILTKVDA-DVKGGVILSLAYELNKPVG 285
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
++G GQ+Y DL N + ++ L
Sbjct: 286 YLGVGQTYDDLIPFNAEWFIQRLF 309
>gi|347523535|ref|YP_004781105.1| signal recognition particle-docking protein FtsY [Pyrolobus fumarii
1A]
gi|343460417|gb|AEM38853.1| signal recognition particle-docking protein FtsY [Pyrolobus fumarii
1A]
Length = 314
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 141/236 (59%), Gaps = 12/236 (5%)
Query: 354 MEEALVRIL-TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
+ EALV +L T R ID++ + + +P V+VF+GVNGVGK+T +AK AY + +
Sbjct: 89 VHEALVELLKTGWRHIDLVSEAKEKCRRGEPLVIVFLGVNGVGKTTTIAKFAYMFKKAGL 148
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+ ++AA DTFR+GA EQLR HA R+ Y DPA VA +AIQ A G VVLVD
Sbjct: 149 TPVIAAADTFRAGAQEQLRLHAERVGAVFVGGRYGADPASVAYDAIQMAKSRGYCVVLVD 208
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K++ + PD + V +AL GNDAV+Q F++ +
Sbjct: 209 TAGRMHTDIDLMEELRKIVRVAKPDYKVLVVDALTGNDAVEQAKFFDEAVG--------- 259
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+D ++LTKFD D K G A+S+V P++F+G GQ Y DL+ + + +V LL
Sbjct: 260 -VDFVVLTKFDA-DAKGGTAISVVDAIKKPILFLGVGQRYEDLEPMEPEKLVAKLL 313
>gi|448491604|ref|ZP_21608444.1| cell division protein FtsY [Halorubrum californiensis DSM 19288]
gi|445692604|gb|ELZ44775.1| cell division protein FtsY [Halorubrum californiensis DSM 19288]
Length = 368
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 129/210 (61%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S ++A DT+R+GA EQ++ HA RL
Sbjct: 167 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVLANGDTYRAGANEQIQEHADRLG 226
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 227 RDLISHDQGGDPAAVIYDGVEYAEANDIDVVLGDTAGRLHTSDDLMAQLEKIDRVVDPDM 286
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 287 TLFVDEAVAGQDAVNRAKEFNDAAA----------IDGAILTKADA-DSSGGAAISVAYV 335
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+ + + + +V++LL
Sbjct: 336 TGKPILFLGTGQGYDDITRFDPEDLVESLL 365
>gi|448446177|ref|ZP_21590663.1| cell division protein FtsY [Halorubrum saccharovorum DSM 1137]
gi|445684369|gb|ELZ36747.1| cell division protein FtsY [Halorubrum saccharovorum DSM 1137]
Length = 366
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S +MA DT+R+GA EQ++ HA RL
Sbjct: 165 EAEKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVMANGDTYRAGANEQIQEHADRLG 224
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 225 RELISHDQGGDPAAVIYDGVEYAAANDIDVVLGDTAGRLHTSDDLMSQLEKIDRVVDPDM 284
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ YV
Sbjct: 285 TLFVDEAVAGQDAVNRAKEFN----------DAAEIDGAILTKADA-DSSGGAAISVAYV 333
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y DL + + +V++LL
Sbjct: 334 TGKPILFLGTGQGYDDLTLFDPEELVESLL 363
>gi|432329191|ref|YP_007247335.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
sp. MAR08-339]
gi|432135900|gb|AGB05169.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
sp. MAR08-339]
Length = 307
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 129/207 (62%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
+P V++F+GVNG GK+T +AK+A +L+ +V++AA DTFR+GA+EQL H + L V +
Sbjct: 110 RPTVIMFLGVNGTGKTTVIAKIAKYLMDKNHTVVLAAADTFRAGAIEQLDVHGKNLGVKV 169
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+ DPA VA +AI+ A D VL+DTAGRMQ N LM + K+ + P L +F
Sbjct: 170 IKHQAGGDPAAVAYDAIKHAKAKRKDFVLIDTAGRMQTNRNLMEEMKKIKRVAKPHLTIF 229
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
VG++L GNDA++Q F++++ +D I+LTK D D K GAA+S+ Y
Sbjct: 230 VGDSLAGNDAIEQAKIFDREVG----------VDAIILTKIDA-DAKGGAAISIAYELKK 278
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F G GQ+Y DL K +V +K +
Sbjct: 279 PIIFFGNGQNYEDLMKFDVNWFLKRVF 305
>gi|305663810|ref|YP_003860098.1| signal recognition particle-docking protein FtsY [Ignisphaera
aggregans DSM 17230]
gi|304378379|gb|ADM28218.1| signal recognition particle-docking protein FtsY [Ignisphaera
aggregans DSM 17230]
Length = 306
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 139/234 (59%), Gaps = 13/234 (5%)
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ L ++L S D + + AK KP +VF+G+NGVGK+T +AKVAY L + V +
Sbjct: 83 DVLRKLLDNATSYDFIE--YIAKSSEKPVKIVFMGINGVGKTTTIAKVAYMLKKAGVKPV 140
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ A DTFR+GA EQL+ H+ RL +P Y DPA VA + I A++N DVVL+DTAG
Sbjct: 141 IVAADTFRAGAQEQLKKHSERLGIPFIGGKYGADPAAVAFDGIVFASKNRFDVVLIDTAG 200
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
RM + LM L K+I + P + + V +AL GNDA++Q KF++ + ID
Sbjct: 201 RMHIDVDLMNELKKVIKVVKPHIKVLVLDALTGNDAIEQAKKFDEAIG----------ID 250
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G++LTK D D GAA+S+V G + +VG GQ Y DL + + I++ L K
Sbjct: 251 GVILTKLDA-DASGGAAVSVVAGLGKKIFYVGVGQGYDDLIRYSSDIIIRLLFK 303
>gi|448424346|ref|ZP_21582396.1| cell division protein FtsY [Halorubrum terrestre JCM 10247]
gi|448448896|ref|ZP_21591394.1| cell division protein FtsY [Halorubrum litoreum JCM 13561]
gi|445682339|gb|ELZ34758.1| cell division protein FtsY [Halorubrum terrestre JCM 10247]
gi|445813988|gb|EMA63960.1| cell division protein FtsY [Halorubrum litoreum JCM 13561]
Length = 369
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S ++A DT+R+GA EQ+R HA RL
Sbjct: 168 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVLANGDTYRAGANEQIREHADRLG 227
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 228 RDLISHDQGGDPAAVIYDGVEYAEANDIDVVLGDTAGRLHTSDDLMAQLEKIDRVVDPDM 287
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +F+ A IDG +LTK D D GAA+S+ YV
Sbjct: 288 TLFVDEAVAGQDAVNRAKEFDDAAA----------IDGAILTKADA-DSSGGAAISVAYV 336
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+ + + +V++LL
Sbjct: 337 TGKPILFLGTGQGYDDITLFDPEDLVESLL 366
>gi|284174532|ref|ZP_06388501.1| signal recognition particle receptor protein [Sulfolobus
solfataricus 98/2]
gi|13813490|gb|AAK40678.1| Signal recognition particle protein (docking protein) (srpR)
[Sulfolobus solfataricus P2]
Length = 266
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 154/264 (58%), Gaps = 25/264 (9%)
Query: 336 EPALKALKDRLMTKNVA-----------AMEEALVRILTPRRSIDILRDVHAAKEQRKPY 384
E L+ LK+ ++ K V ++++++ I+T +I++L ++ K+ KPY
Sbjct: 16 EKILEDLKENIIGKKVKRSDDLERIVKDSLKKSITEIITKNNAINVLEEI---KKSPKPY 72
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL H+R L++P+ +
Sbjct: 73 IIIFFGINGVGKTTTIAKFAYMLKKNGLSCIISASDTFRAAAQEQLEVHSRNLEIPLIKG 132
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA VA +AI+ A G DVVL+DTAGRM + L+ L +++ + P+L + V +
Sbjct: 133 RYGGDPASVAFDAIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNIAKPNLKILVLD 192
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L GNDA++Q F + D ++LTK D D K G LS+ Y PV
Sbjct: 193 SLGGNDALEQAKYFENNVG----------FDLVILTKVDA-DVKGGVILSLAYELNKPVG 241
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
++G GQ+Y DL N + ++ L
Sbjct: 242 YLGIGQAYDDLIPFNAEWFIQRLF 265
>gi|448479289|ref|ZP_21604141.1| cell division protein FtsY [Halorubrum arcis JCM 13916]
gi|445822567|gb|EMA72331.1| cell division protein FtsY [Halorubrum arcis JCM 13916]
Length = 369
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S ++A DT+R+GA EQ+R HA RL
Sbjct: 168 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVLANGDTYRAGANEQIREHADRLG 227
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N D+VL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 228 RDLISHDQGGDPAAVIYDGVEYAEANDIDIVLGDTAGRLHTSDDLMAQLEKIDRVVDPDM 287
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +F+ A IDG +LTK D D GAA+S+ YV
Sbjct: 288 TLFVDEAVAGQDAVNRAKEFDDAAA----------IDGAILTKADA-DSSGGAAISVAYV 336
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+ + + +V++LL
Sbjct: 337 TGKPILFLGTGQGYDDITLFDPEDLVESLL 366
>gi|313124889|ref|YP_004035153.1| signal recognition particle-docking protein ftsy [Halogeometricum
borinquense DSM 11551]
gi|448287297|ref|ZP_21478510.1| cell division protein FtsY [Halogeometricum borinquense DSM 11551]
gi|312291254|gb|ADQ65714.1| signal recognition particle-docking protein FtsY [Halogeometricum
borinquense DSM 11551]
gi|445572505|gb|ELY27043.1| cell division protein FtsY [Halogeometricum borinquense DSM 11551]
Length = 446
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 129/210 (61%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F GVNGVGK+T++AK+A + + +SV++A DT+R+GA EQ+R HA L
Sbjct: 244 EADKPVTLIFTGVNGVGKTTSIAKMARYFEKQGLSVVLANGDTYRAGANEQIRKHAENLD 303
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
I DPA V +A++ A + DVVL DTAGR+ + LM L K+ + PDL
Sbjct: 304 TKIISHEQGGDPAAVIYDAVEYAEAHDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVEPDL 363
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ YV
Sbjct: 364 TLFVDEAVAGQDAVERAKQFNEAAE----------IDGAVLTKADA-DSNGGAAISIAYV 412
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+++ + + +V+ LL
Sbjct: 413 TGKPILFLGVGQGYDDIEQFDPERMVERLL 442
>gi|296242673|ref|YP_003650160.1| signal recognition particle-docking protein FtsY [Thermosphaera
aggregans DSM 11486]
gi|296095257|gb|ADG91208.1| signal recognition particle-docking protein FtsY [Thermosphaera
aggregans DSM 11486]
Length = 297
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 135/236 (57%), Gaps = 15/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
++ L+ + S+D+L A KP +VF+GVNGVGK+T +AK+A L +
Sbjct: 72 VLKNILIEVFEKAGSVDLLSVARA----NKPCKLVFLGVNGVGKTTTIAKIAVLLRDNGF 127
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+M A DTFR+GA EQL+ H+ R +P+F Y DPA VA +AIQ A+ G D +L+D
Sbjct: 128 KPLMVAADTFRAGAQEQLKIHSERTGIPVFTGKYGSDPASVAFDAIQFASSRGFDALLID 187
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + L+ L K++ + P + V +AL GNDA++Q FN+ +
Sbjct: 188 TAGRMHVDIDLVNELKKVVRVVKPHFKILVVDALTGNDAIEQARFFNEAVG--------- 238
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DG+++TK D + G LS+ Y+ G PV++ G GQ Y DLK NV V +L
Sbjct: 239 -VDGVIVTKVDAYEQG-GVPLSIAYILGKPVIYAGVGQGYKDLKPFNVYEYVNRIL 292
>gi|399576176|ref|ZP_10769933.1| signal recognition particle-docking protein ftsy [Halogranum
salarium B-1]
gi|399238887|gb|EJN59814.1| signal recognition particle-docking protein ftsy [Halogranum
salarium B-1]
Length = 471
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 130/211 (61%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP V++F GVNGVGK+T++AK+ +L + +S +MA DT+R+GA EQ+R HA L
Sbjct: 268 RQADKPVVIIFTGVNGVGKTTSIAKMTEYLEKQGLSSVMANGDTYRAGANEQIRKHAENL 327
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+ DPA V +A++ A + DVVL DTAGR+ + LM L K+ + PD
Sbjct: 328 DRKLIAHEQGGDPAAVIYDAVEYAEAHDIDVVLGDTAGRLHTSNDLMAQLEKINRVVEPD 387
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV + KF++ IDG +LTK D D + GAA+S+ Y
Sbjct: 388 MTLFVDEAVAGQDAVQRAKKFDEAAE----------IDGAILTKADA-DSQGGAAISIAY 436
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y D+++ + + +V +LL
Sbjct: 437 VTGKPILFLGTGQGYDDMERFDPEELVSSLL 467
>gi|15679603|ref|NP_276720.1| signal recognition particle protein (docking protein)
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622733|gb|AAB86081.1| signal recognition particle protein (docking protein)
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 358
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 147/233 (63%), Gaps = 12/233 (5%)
Query: 356 EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
EAL + + S+D + D+ E++KP V++FVG+NG GK+T +AKVA + ++ + +
Sbjct: 137 EALKKAVKDVLSVDGV-DLPQLVEKKKPLVIMFVGINGTGKTTTIAKVARYFMKKGLEPV 195
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+AA DTFR+GA+EQ+ HA +L V + DPA VA +A+ A G DVVL+DTAG
Sbjct: 196 IAAADTFRAGAIEQIGQHADKLGVKLISHRKGADPAAVAFDAVSHAKAQGKDVVLIDTAG 255
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
RMQ N LM ++K+ + PDL++FVG+AL GNDA++Q ++F++ + ID
Sbjct: 256 RMQTNVNLMDEMAKIKRVVRPDLIVFVGDALTGNDAIEQAARFDEAVG----------ID 305
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
++LTK D + GAALS+ Y+ P++F+G GQ Y D+ + + +V+ L
Sbjct: 306 AVILTK-ADADARGGAALSIGYMIKRPIIFMGIGQGYDDIMEFKPEWMVEQLF 357
>gi|308457114|ref|XP_003090954.1| hypothetical protein CRE_22168 [Caenorhabditis remanei]
gi|308259782|gb|EFP03735.1| hypothetical protein CRE_22168 [Caenorhabditis remanei]
Length = 114
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/113 (69%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS-SPNPQLID 535
MQDNEPLMR L+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LA+ ++ P+LID
Sbjct: 1 MQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHAAPGAKPRLID 60
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GI+LTKFDTIDDKVGAA+SM Y++G P++FVGCGQ+Y DL+ LNV ++V +LL
Sbjct: 61 GIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYADLRNLNVGAVVHSLL 113
>gi|424819723|ref|ZP_18244787.1| Signal recognition particle receptor [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
gi|326422481|gb|EGD71879.1| Signal recognition particle receptor [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
Length = 378
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 127/201 (63%), Gaps = 11/201 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
+ +KP+V++ +GVNG GK+T +AK+ L + ++AA DTFR+ ++EQL HA++L+
Sbjct: 178 KSKKPFVILVIGVNGAGKTTTIAKLCKLFLSKGLKPVIAAGDTFRAASIEQLEIHAKKLK 237
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
VPI + Y DPA VA +AI+ A DVV++DTAGR N+ L+ L K+ ++ PD+
Sbjct: 238 VPIIKHTYGSDPAAVAFDAIKHANSAKEDVVVIDTAGRSDINKNLIEELKKVKRVSKPDM 297
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+F+G+AL GND V Q F++++ ID +L+K D +D K GA LS+ Y+
Sbjct: 298 TIFIGDALTGNDVVKQAEVFDKEIG----------IDANILSKAD-VDKKGGAVLSISYI 346
Query: 559 SGAPVMFVGCGQSYTDLKKLN 579
+ P++F+G GQ Y DL N
Sbjct: 347 TKKPILFLGVGQGYDDLIPFN 367
>gi|435845533|ref|YP_007307783.1| signal recognition particle-docking protein FtsY [Natronococcus
occultus SP4]
gi|433671801|gb|AGB35993.1| signal recognition particle-docking protein FtsY [Natronococcus
occultus SP4]
Length = 421
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 130/210 (61%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP V++F GVNGVGK+T +AK++ +L Q S ++A DT+R+GA +Q++ HA L
Sbjct: 221 EDKPAVLLFTGVNGVGKTTTIAKMSRYLEQRGYSTVLANGDTYRAGANQQIQEHADALDR 280
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N +D+VL DTAGR+ +E LM L K+ + +PDL
Sbjct: 281 KCISHEQGGDPAAVLYDAVEYAEANDTDIVLADTAGRLHTDEGLMDQLEKIDRVVDPDLT 340
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+
Sbjct: 341 LFVDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVT 389
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y DL++ + +V+ LL+
Sbjct: 390 GKPILFLGVGQGYDDLERFDPDEMVERLLE 419
>gi|268553691|ref|XP_002634832.1| Hypothetical protein CBG13941 [Caenorhabditis briggsae]
Length = 114
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 98/114 (85%), Gaps = 3/114 (2%)
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN--PQLI 534
MQDNEPLMR L+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LA+ ++P P+LI
Sbjct: 1 MQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALAN-HAAPGQKPRLI 59
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DGI+LTKFDTIDDKVGAA+SM Y++G P++FVGCGQ+Y DL+ LNV ++V +LL
Sbjct: 60 DGIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYADLRNLNVGAVVNSLL 113
>gi|448354438|ref|ZP_21543195.1| cell division protein FtsY [Natrialba hulunbeirensis JCM 10989]
gi|445637955|gb|ELY91102.1| cell division protein FtsY [Natrialba hulunbeirensis JCM 10989]
Length = 475
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 167/321 (52%), Gaps = 39/321 (12%)
Query: 297 SEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAM 354
+E D+E G + + TG+ + GK +++ DLE L L+ L++ +V
Sbjct: 164 AEADDEAGDADTDNNGSTGFGRKAKSFVKGKFVIEEEDLEGPLHELEMALLSSDVEMGVA 223
Query: 355 EEAL----------VRILTPRRSI-------DILRDVHAAKE---------QRKPYVVVF 388
EE L R T D + DV + + + KP ++F
Sbjct: 224 EEILDNIRDELIGETRTFTTSTGAVVEEALRDAIYDVISVGQFDFDERIAVEDKPVTIIF 283
Query: 389 VGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK 448
GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L I
Sbjct: 284 TGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHANALDTKIITHEQGG 343
Query: 449 DPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVG 508
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+ LFV EA+ G
Sbjct: 344 DPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVDPDMTLFVDEAVAG 403
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
DAV++ +FN N IDG +LTK D D GAA+S+ +V+G P++F+G
Sbjct: 404 QDAVNRAREFN----------NAAEIDGAILTKADA-DSNGGAAISVAHVTGRPILFLGV 452
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
GQ Y +++ + + +V LL+
Sbjct: 453 GQGYDHIERFDPEEMVDRLLE 473
>gi|118431321|ref|NP_147702.2| signal recognition particle protein [Aeropyrum pernix K1]
gi|116062644|dbj|BAA80066.2| probable signal recognition particle protein [Aeropyrum pernix K1]
Length = 308
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 149/257 (57%), Gaps = 28/257 (10%)
Query: 336 EPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRK----PYVVVFVGV 391
EP K ++D A+ +AL+ +L P D+ AA+ +R+ P V++F+GV
Sbjct: 75 EPVEKVVRD--------ALRKALLTLLDPGPRPDL-----AAEARRRCGGRPLVILFLGV 121
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPA 451
NG GK+T +AKVAY L + V+ ++AA DTFR+GA EQL HA +L VPI Y DPA
Sbjct: 122 NGTGKTTTIAKVAYMLRKAGVTPVIAAADTFRAGAQEQLAVHAEKLGVPIVRGRYGGDPA 181
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
VA +A++ A G VLVDTAGRM + L+ L K++ + PD + V ++L GNDA
Sbjct: 182 SVAYDAVKHAESRGFCAVLVDTAGRMHVDSNLVEELRKIVRVVKPDYKILVVDSLTGNDA 241
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
V+Q F++ + +DG+++TK D D K G +S+ + P++++G GQ
Sbjct: 242 VEQARLFDEAVG----------VDGVIVTKVDA-DPKGGTLVSVAHAIRKPILYIGTGQR 290
Query: 572 YTDLKKLNVKSIVKTLL 588
Y DL+ + + IV LL
Sbjct: 291 YEDLRPFDPQKIVDQLL 307
>gi|222479253|ref|YP_002565490.1| signal recognition particle-docking protein FtsY [Halorubrum
lacusprofundi ATCC 49239]
gi|222452155|gb|ACM56420.1| signal recognition particle-docking protein FtsY [Halorubrum
lacusprofundi ATCC 49239]
Length = 371
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S +MA DT+R+GA EQ++ HA RL
Sbjct: 170 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVMANGDTYRAGANEQIQEHADRLD 229
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ ++ LM L K+ + PD+
Sbjct: 230 RELISHDQGGDPAAVIYDGVEYAEANDIDVVLGDTAGRLHTSDDLMAQLEKIDRVVAPDM 289
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ YV
Sbjct: 290 TLFVDEAVAGQDAVNRAKEFN----------DAAEIDGAVLTKADA-DSSGGAAISVAYV 338
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y DL + + +V++LL
Sbjct: 339 TGKPILFLGTGQGYDDLTLFDPEELVESLL 368
>gi|408405034|ref|YP_006863017.1| signal recognition particle receptor FtsY [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365630|gb|AFU59360.1| signal recognition particle receptor FtsY [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 490
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 130/206 (63%), Gaps = 11/206 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P+V+VF+G+NG GK+T +AKVA L + +V++AA DT R+GA+EQL H RL + I
Sbjct: 107 PFVIVFLGINGTGKTTTVAKVANLLRKAGFTVVVAAGDTHRAGAIEQLEQHTNRLSLKIV 166
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
++ Y DP+ V ++A + A +N DVVL+DTAGRMQ ++ LM + K++ + PD+ LF+
Sbjct: 167 KQRYGADPSSVGRDAYEHAKKNFIDVVLMDTAGRMQTSKNLMDEMGKIVRVVKPDVKLFI 226
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
G++L GND ++Q +F Q DG +LTK D D K GAA+S+ +++ P
Sbjct: 227 GDSLAGNDTINQAREFFQYTN----------FDGAILTKIDA-DAKGGAAISIAHITSKP 275
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ ++G GQ Y D+ + +++L
Sbjct: 276 IAYIGVGQGYDDIIPFDPDKFIESLF 301
>gi|448435706|ref|ZP_21586842.1| cell division protein FtsY [Halorubrum tebenquichense DSM 14210]
gi|445683431|gb|ELZ35827.1| cell division protein FtsY [Halorubrum tebenquichense DSM 14210]
Length = 363
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 140/237 (59%), Gaps = 15/237 (6%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
AA+ +ALV ++ + D + E KP +VF GVNGVGK+T++AK++ WL
Sbjct: 139 AALHDALVDVIAVGQ-FDFEERI---AEADKPVTIVFTGVNGVGKTTSIAKLSEWLADRG 194
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
S ++A DT+R+GA EQ++ HA RL + DPA V + ++ A N DVVL
Sbjct: 195 YSSVLANGDTYRAGANEQIQEHADRLGRDLISHDQGGDPAAVIYDGVEYAEANDVDVVLG 254
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ ++ LM L K+ + +PD+ +FV EA+ G DAV++ +FN A
Sbjct: 255 DTAGRLHTSDDLMAQLEKIDRVVDPDMTIFVDEAVAGQDAVNRAKEFNDAAA-------- 306
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D GAA+S+ YV+G P++F+G GQ Y DL + + +V++LL
Sbjct: 307 --IDGAILTKADA-DSSGGAAISVAYVTGKPILFLGTGQGYDDLALFDPEELVESLL 360
>gi|335436797|ref|ZP_08559587.1| cell division protein FtsY [Halorhabdus tiamatea SARL4B]
gi|334897390|gb|EGM35525.1| cell division protein FtsY [Halorhabdus tiamatea SARL4B]
Length = 410
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP V++F GVNGVGK+T +AK+A +L S ++A DT+R+GA +QL HA L
Sbjct: 209 EAEKPVVIIFTGVNGVGKTTTIAKLASYLEDRGYSSVLANGDTYRAGANQQLGEHAEALD 268
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
VP DP V +A++ A N DVVL DTAGR+ +E LM LSK+ + PD+
Sbjct: 269 VPYISHEQGGDPTAVIYDAVEYAEANDVDVVLGDTAGRLHTSEGLMDQLSKIERIIEPDM 328
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV + ++FN N +DG +LTK D D + GAA+S+ +V
Sbjct: 329 TLFVDEAVAGQDAVTRATEFN----------NAAEVDGAILTKADA-DPQGGAAISIAHV 377
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
+G P++F+G GQ Y L + K +V L
Sbjct: 378 TGKPILFLGTGQGYEHLDPFDPKEVVDQL 406
>gi|448351047|ref|ZP_21539857.1| cell division protein FtsY [Natrialba taiwanensis DSM 12281]
gi|445635235|gb|ELY88406.1| cell division protein FtsY [Natrialba taiwanensis DSM 12281]
Length = 479
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 163/309 (52%), Gaps = 41/309 (13%)
Query: 310 DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEAL--------- 358
D TG+ + GK +++ DLE L L+ L++ +V EE L
Sbjct: 180 DTTSTGFGRKAKSFVKGKFVIEEEDLEDPLYELEMALLSSDVEMGVAEEILDTIRDELVG 239
Query: 359 -VRILTP----------RRSI-DILR------DVHAAKEQRKPYVVVFVGVNGVGKSTNL 400
R T R +I D++ D H A E KP +VF GVNGVGK+T++
Sbjct: 240 ETRTFTTSTGDVVENALREAIHDVISVGQFDFDEHIAVED-KPVTIVFTGVNGVGKTTSI 298
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQE 460
AK++ + + S +MA DT+R+GA EQ++ HA L + DPA V +A++
Sbjct: 299 AKLSRYFEERGYSTVMANGDTYRAGANEQIQEHADELDTKLIAHEQGGDPAAVLYDAVEY 358
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
A N DVVL DTAGR+ NE LM L K+ + +PD+ LFV EA+ G DAV++ +FN
Sbjct: 359 AEANDIDVVLGDTAGRLHTNEGLMDQLEKIDRVVDPDMTLFVDEAVAGQDAVNRAREFN- 417
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
+ +DG +LTK D D GAA+S+ +V+G P++F+G GQ Y D+++ +
Sbjct: 418 ---------DAAEVDGTILTKADA-DSNGGAAISIAHVTGKPILFLGIGQGYDDIERFDP 467
Query: 581 KSIVKTLLK 589
+V LL+
Sbjct: 468 DEMVDRLLE 476
>gi|126465987|ref|YP_001041096.1| signal recognition particle-docking protein FtsY [Staphylothermus
marinus F1]
gi|126014810|gb|ABN70188.1| signal recognition particle-docking protein FtsY [Staphylothermus
marinus F1]
Length = 295
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 141/257 (54%), Gaps = 24/257 (9%)
Query: 344 DRLMTKNVAAMEEALVR------------ILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 391
+ + TK V A+E +VR I + S++++ H A + KPY++VF+GV
Sbjct: 48 EEITTKLVEAVENKIVRDKESLIEFLKKTIRSYFDSVELIDIFHEA-SKTKPYIIVFLGV 106
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPA 451
NGVGK+T +AK A +M A DTFR+GA EQLR H R +P+F Y DPA
Sbjct: 107 NGVGKTTTIAKTAVLFRDKGFKPLMVAADTFRAGAQEQLRIHGERTGIPVFMGKYGADPA 166
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+A +AI+ A G DVVL+DTAGRM + L+ L K+I + P + V +AL GNDA
Sbjct: 167 SIAFDAIRHAETRGYDVVLIDTAGRMHTDSNLVDELRKIIRVAKPHRKILVVDALTGNDA 226
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
++Q F++ + +D +++TK D + G LS+VY P++ +G GQ
Sbjct: 227 IEQAVFFDKAVG----------VDAVIVTKVDAYEQG-GVPLSIVYSIRKPIIMIGVGQG 275
Query: 572 YTDLKKLNVKSIVKTLL 588
Y DLK N+ + +L
Sbjct: 276 YKDLKPFNIDEFLDKIL 292
>gi|448456129|ref|ZP_21594982.1| cell division protein FtsY [Halorubrum lipolyticum DSM 21995]
gi|445812964|gb|EMA62950.1| cell division protein FtsY [Halorubrum lipolyticum DSM 21995]
Length = 381
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP VVF GVNGVGK+T++AK++ WL S +MA DT+R+GA EQ++ HA RL +
Sbjct: 183 KPVTVVFTGVNGVGKTTSIAKLSEWLADRGYSSVMANGDTYRAGANEQIQEHADRLDREL 242
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V + ++ A + DVVL DTAGR+ ++ LM L K+ + +PD+ LF
Sbjct: 243 ISHDQGGDPAAVIYDGVEYAEAHDIDVVLGDTAGRLHTSDDLMAQLEKIDRVVDPDMTLF 302
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ YV+G
Sbjct: 303 VDEAVAGQDAVNRAKEFN----------DAAEIDGAILTKADA-DSSGGAAISVAYVTGK 351
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G GQ Y DL + +V++LL
Sbjct: 352 PILFLGTGQGYDDLTLFEPEELVESLL 378
>gi|448468904|ref|ZP_21600001.1| cell division protein FtsY [Halorubrum kocurii JCM 14978]
gi|445810014|gb|EMA60047.1| cell division protein FtsY [Halorubrum kocurii JCM 14978]
Length = 379
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 127/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ WL S +MA DT+R+GA EQ++ HA RL
Sbjct: 178 EADKPVTIVFTGVNGVGKTTSIAKLSEWLADRGYSSVMANGDTYRAGANEQIQEHADRLD 237
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + DVVL DTAGR+ ++ LM L K+ + +PD+
Sbjct: 238 RELISHDQGGDPAAVIYDGVEYAEAHDIDVVLGDTAGRLHTSDDLMAQLEKIDRVVDPDM 297
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ YV
Sbjct: 298 TLFVDEAVAGQDAVNRAKEFN----------DAAEIDGAILTKADA-DSSGGAAISVAYV 346
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+ + +V++LL
Sbjct: 347 TGKPILFLGTGQGYDDITLFEPEELVESLL 376
>gi|254167206|ref|ZP_04874059.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
boonei T469]
gi|197624062|gb|EDY36624.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
boonei T469]
Length = 307
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 121/199 (60%), Gaps = 11/199 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
+P V++F+GVNG GK+T +AK+A +L SV+MAA DTFR+GA+EQ+ H L + +
Sbjct: 110 RPTVIMFLGVNGTGKTTVIAKLAKYLKDKGYSVVMAAGDTFRAGAIEQISIHGDNLGIKV 169
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+ DPA V +AI+ A D VL+DTAGRMQ N LM + K+ + P L +F
Sbjct: 170 IKHQAGGDPAAVCYDAIEHAKAKHRDFVLIDTAGRMQTNRNLMEEMKKIKRVAKPHLTIF 229
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
VG+AL GNDA++Q KF + + ID ++L K D D K GAALS+ Y
Sbjct: 230 VGDALAGNDAIEQAKKFEEAVG----------IDAVILNKVDA-DAKGGAALSIAYELNK 278
Query: 562 PVMFVGCGQSYTDLKKLNV 580
P++F+G GQ Y DL K +V
Sbjct: 279 PIIFLGNGQKYDDLMKFDV 297
>gi|448380978|ref|ZP_21561335.1| cell division protein FtsY [Haloterrigena thermotolerans DSM 11522]
gi|445663634|gb|ELZ16377.1| cell division protein FtsY [Haloterrigena thermotolerans DSM 11522]
Length = 530
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L+
Sbjct: 328 EADKPVTIVFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHADALE 387
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + PD+
Sbjct: 388 TKLISHEQGGDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVGPDM 447
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ +V
Sbjct: 448 TLFVDEAVAGQDAVNRAREFN----------DAAEIDGAILTKADA-DSNGGAAISIAHV 496
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+G P++F+G GQ Y DL++ + ++ LL+
Sbjct: 497 TGKPILFLGVGQGYDDLERFDPDEMLDRLLE 527
>gi|433592905|ref|YP_007282401.1| signal recognition particle-docking protein FtsY [Natrinema
pellirubrum DSM 15624]
gi|448335351|ref|ZP_21524499.1| cell division protein FtsY [Natrinema pellirubrum DSM 15624]
gi|433307685|gb|AGB33497.1| signal recognition particle-docking protein FtsY [Natrinema
pellirubrum DSM 15624]
gi|445617128|gb|ELY70728.1| cell division protein FtsY [Natrinema pellirubrum DSM 15624]
Length = 539
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L+
Sbjct: 337 EADKPVTIVFTGVNGVGKTTSIAKLSRYFEERGFSTVMANGDTYRAGANEQIQEHADALE 396
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + PD+
Sbjct: 397 TKLISHEQGGDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVGPDM 456
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ +V
Sbjct: 457 TLFVDEAVAGQDAVNRAREFN----------DAAEIDGAILTKADA-DSNGGAAISIAHV 505
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+G P++F+G GQ Y DL++ + ++ LL+
Sbjct: 506 TGKPILFLGVGQGYDDLEQFDPDEMLDRLLE 536
>gi|448302134|ref|ZP_21492118.1| cell division protein FtsY [Natronorubrum tibetense GA33]
gi|445582130|gb|ELY36475.1| cell division protein FtsY [Natronorubrum tibetense GA33]
Length = 512
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L+
Sbjct: 312 EDKPVTLVFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHADALET 371
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ DPA V +A++ A N D+VL DTAGR+ +E LM L K+ + +PD+
Sbjct: 372 NLISHQQGGDPAAVLYDAVEYAEANDIDIVLGDTAGRLHTDEGLMDQLEKIDRVVDPDMT 431
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN+ A IDG +LTK D D GAA+S+ +V+
Sbjct: 432 LFVDEAVAGQDAVNRAREFNEAAA----------IDGAILTKADA-DSNGGAAISIAHVT 480
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y DL + + ++ LL
Sbjct: 481 GKPILFLGVGQGYDDLVRFDPDDMIDRLL 509
>gi|325958306|ref|YP_004289772.1| signal recognition particle-docking protein FtsY [Methanobacterium
sp. AL-21]
gi|325329738|gb|ADZ08800.1| signal recognition particle-docking protein FtsY [Methanobacterium
sp. AL-21]
Length = 427
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
Query: 353 AMEEALVRIL-TPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
A+++A+ IL P + D+ + AK+ +P ++FVG+NG GK+T +AK++ + +
Sbjct: 202 ALKKAISEILDIPGK--DLTSLLEEAKKSGEPLKIMFVGINGTGKTTTIAKISTYFINKG 259
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++AA DTFR+GA+EQL HA L V I + DPA VA +A+ A G ++VLV
Sbjct: 260 YTPVIAASDTFRAGAIEQLTHHADNLDVKIIKHKKGADPAAVAFDAVAHARAKGKELVLV 319
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRMQ N LM + K+ + PDL+++VG+AL GND+V+Q KFN +
Sbjct: 320 DTAGRMQTNINLMDEMKKIKRVIKPDLIIYVGDALTGNDSVEQAKKFNDAVT-------- 371
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DGI+LTK D K GAALS+ YV P++F+G GQSY+D+ + + +V+ +L
Sbjct: 372 --VDGIILTK-ADADAKGGAALSIGYVIQKPILFLGVGQSYSDIIEFKPEWMVEQIL 425
>gi|448363978|ref|ZP_21552572.1| cell division protein FtsY [Natrialba asiatica DSM 12278]
gi|445644866|gb|ELY97873.1| cell division protein FtsY [Natrialba asiatica DSM 12278]
Length = 479
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 130/217 (59%), Gaps = 12/217 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
D H A E KP +VF GVNGVGK+T++AK++ + S +MA DT+R+GA EQ++
Sbjct: 272 DEHIAVED-KPVTIVFTGVNGVGKTTSIAKLSRYFEDRGYSTVMANGDTYRAGANEQIQE 330
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HA L + DPA V +A++ A N DVVL DTAGR+ NE LM L K+
Sbjct: 331 HADALDTKLIAHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTNEGLMDQLEKIDR 390
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ +PD+ LFV EA+ G DAV++ +FN + +DG +LTK D D GAA
Sbjct: 391 VVDPDMTLFVDEAVAGQDAVNRAREFN----------DAAEVDGSILTKADA-DSNGGAA 439
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+S+ +VSG P++F+G GQ Y D+++ + +V LL+
Sbjct: 440 ISIAHVSGKPILFLGVGQGYDDIEQFDPDEMVDRLLE 476
>gi|124028446|ref|YP_001013766.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
gi|123979140|gb|ABM81421.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
Length = 312
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 141/239 (58%), Gaps = 13/239 (5%)
Query: 351 VAAMEEALVRILTP-RRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
V ++E+A+V +L+ + +D++ + + + P ++F GVNGVGK+T +AK AY Q
Sbjct: 79 VESLEKAIVDVLSRGYQPLDLIAEARS-RSPGNPLRILFFGVNGVGKTTTIAKFAYMFKQ 137
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
+ ++ ++AA DT+R+GA EQLR HA +L VP Y DPA V +AI+ A G V+
Sbjct: 138 NGITPVIAAADTYRAGAQEQLRRHAEKLSVPFIGGRYGADPASVVYDAIEYARARGYRVI 197
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L DTAGRM + LM L K+ + PD V +AL GNDAV+Q F++ +
Sbjct: 198 LADTAGRMHTDRDLMEELRKITRVAKPDYRALVVDALTGNDAVEQARFFDEAVG------ 251
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ID I+LTK D D K G ALS+ V+G P++FVG GQ Y DL+ + K + ++
Sbjct: 252 ----IDFIILTKVDA-DVKGGTALSVAAVTGKPILFVGTGQKYEDLELFDPKRYTEKII 305
>gi|323338216|gb|EGA79449.1| Srp101p [Saccharomyces cerevisiae Vin13]
Length = 359
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 143/276 (51%), Gaps = 66/276 (23%)
Query: 310 DAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA------------- 352
+AK +G+ S+ F + + G ++++DL+ L+ L +L+TKNVA
Sbjct: 67 EAKNSGYVSTAFGFLQKHVLGNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSH 126
Query: 353 -------------------AMEEALVRILTPRRSIDILRDVHAAKEQRK------PYVVV 387
++ +AL +ILTP S+D+LR++ + + ++ PYV
Sbjct: 127 DLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFS 186
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ--------- 438
VGVNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H L
Sbjct: 187 IVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVR 246
Query: 439 -------------VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPL 483
V +FE GY + +AK+AI+ + D+VL+DTAGR ++ L
Sbjct: 247 GSKNKRGKTGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTL 306
Query: 484 MRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
M L PD ++ VGEALVG D+V Q FN
Sbjct: 307 MSPLKSFADQAKPDKIIMVGEALVGTDSVQQAKNFN 342
>gi|448668335|ref|ZP_21686466.1| cell division protein FtsY [Haloarcula amylolytica JCM 13557]
gi|445768417|gb|EMA19502.1| cell division protein FtsY [Haloarcula amylolytica JCM 13557]
Length = 432
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 176/334 (52%), Gaps = 48/334 (14%)
Query: 283 SMMDKEEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKAL 342
++ D + +DSESEED++ G+ G + GK +++ DL+ L L
Sbjct: 117 AVTDDDSASEADSESEEDDDGGR---------GLAAKAKLMATGKTVIEEEDLQSHLDDL 167
Query: 343 KDRLMTKNV--AAMEEALVRI---LT--PRRSI----DILRDV----------------- 374
+ L++ +V + E L + LT RR + +++RD
Sbjct: 168 ELALLSSDVEMSVANEILDGVKENLTGQTRRRLSSTGNLVRDALRESLYDVINVGQFDFD 227
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
++ KP +VF GVNGVGK+T++AK+A + + +S ++A DT+R+GA EQL HA
Sbjct: 228 ERVQQADKPVTIVFTGVNGVGKTTSIAKLAQYFEERGLSTVLANGDTYRAGANEQLEKHA 287
Query: 435 RRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
L I DP V +A++ A N DVVL DTAGR+ ++ LM L K+
Sbjct: 288 ENLDKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNI 347
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
+PD+ LFV EA+ G DAV++ +FN + IDG +LTK D D + GAA+S
Sbjct: 348 DPDMTLFVDEAVAGQDAVNRAREFN----------DAAEIDGAILTKADA-DPQGGAAIS 396
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ +V+G P++F+G GQ Y DL+ + + IV +L+
Sbjct: 397 VAHVTGKPILFLGTGQDYGDLEPFDPEEIVDSLI 430
>gi|448366708|ref|ZP_21554831.1| cell division protein FtsY [Natrialba aegyptia DSM 13077]
gi|445654163|gb|ELZ07019.1| cell division protein FtsY [Natrialba aegyptia DSM 13077]
Length = 479
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 130/217 (59%), Gaps = 12/217 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
D H A E KP +VF GVNGVGK+T++AK++ + S +MA DT+R+GA EQ++
Sbjct: 272 DEHIAVED-KPVTIVFTGVNGVGKTTSIAKLSRYFEDRGYSTVMANGDTYRAGANEQIQE 330
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
HA L + DPA V +A++ A N DVVL DTAGR+ NE LM L K+
Sbjct: 331 HADALDTKLIAHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTNEGLMDQLEKIDR 390
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ +PD+ LFV EA+ G DAV++ +FN + +DG +LTK D D GAA
Sbjct: 391 VVDPDMTLFVDEAVAGQDAVNRAREFN----------DAAEVDGAILTKADA-DSNGGAA 439
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+S+ +V+G P++F+G GQ Y D+++ + +V LL+
Sbjct: 440 ISIAHVTGKPILFLGVGQGYDDIEQFDPDEMVDRLLE 476
>gi|284163534|ref|YP_003401813.1| signal recognition particle-docking protein FtsY [Haloterrigena
turkmenica DSM 5511]
gi|284013189|gb|ADB59140.1| signal recognition particle-docking protein FtsY [Haloterrigena
turkmenica DSM 5511]
Length = 529
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ+ HA L
Sbjct: 329 EKPVTIVFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIEQHAEALGTK 388
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ DPA V + ++ A N DVVL DTAGR+ NE LM L K+ + PD+ L
Sbjct: 389 LITHEQGGDPAAVLYDGVEYAEANDIDVVLGDTAGRLHTNEGLMDQLEKIDRVVGPDMTL 448
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+G
Sbjct: 449 FVDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVTG 497
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++F+G GQ Y DL+ + + +V LL+
Sbjct: 498 KPILFLGVGQGYDDLEPFDPEEMVDRLLE 526
>gi|397779467|ref|YP_006543940.1| signal recognition particle protein [Methanoculleus bourgensis MS2]
gi|396937969|emb|CCJ35224.1| putative signal recognition particle protein MJ0291 [Methanoculleus
bourgensis MS2]
Length = 355
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 11/212 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
+E +P ++F GVNG GK+T +AKV ++L ++ SV++ A DTFR+GA+EQ+RTHA R
Sbjct: 151 VRENERPVRILFTGVNGTGKTTTVAKVGHYLQKNGFSVVIGAGDTFRAGAIEQIRTHADR 210
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L + + + DP+ V + +Q A + DVVL DTAGR + LM L K+ + P
Sbjct: 211 LGIKVIQHQAGADPSAVLFDTVQYARAHNIDVVLADTAGRFHNRANLMNQLEKIRRVMKP 270
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
DLV++V EA+ GNDAV + +FN+ + D ++LTK D +D K GAA+S+
Sbjct: 271 DLVVYVDEAVAGNDAVIRADEFNRAVG----------TDAVVLTKAD-MDPKGGAAISIA 319
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G P++F+G GQ Y D+ + + +V LL
Sbjct: 320 HTVGKPILFLGTGQGYDDILPFSPRVVVDELL 351
>gi|76800746|ref|YP_325754.1| signal recognition particle receptor SRalpha [Natronomonas
pharaonis DSM 2160]
gi|76556611|emb|CAI48182.1| signal recognition particle receptor SRalpha [Natronomonas
pharaonis DSM 2160]
Length = 368
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 11/209 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP +VF GVNGVGK+T++AK+A W + S ++A DT+R+GA EQ+ HA L
Sbjct: 170 EKPVTIVFTGVNGVGKTTSIAKLARWFEERGHSSVLANGDTYRAGANEQIEEHADALDKK 229
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
I DPA V +A++ A N DVVL DTAGR+ + LM L K+ + +PDL L
Sbjct: 230 IITHEQGGDPAAVIYDAVEYAEANDVDVVLGDTAGRLHTADDLMAQLEKIDRVVDPDLTL 289
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV EA+ G DA ++ +FN + IDG +LTK D D + GAA+S+ +V+G
Sbjct: 290 FVDEAVAGQDATNRAKEFN----------DAAEIDGAILTKADA-DSQGGAAISIAHVTG 338
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++F+G GQ Y D+++ + IV LL+
Sbjct: 339 KPILFLGTGQGYDDIERFDPDEIVSRLLE 367
>gi|344210679|ref|YP_004794999.1| signal recognition particle receptor [Haloarcula hispanica ATCC
33960]
gi|343782034|gb|AEM56011.1| signal recognition particle receptor [Haloarcula hispanica ATCC
33960]
Length = 428
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + + +S ++A DT+R+GA EQL HA L
Sbjct: 227 QQADKPVTIVFTGVNGVGKTTSIAKLAQYFEERGLSTVLANGDTYRAGANEQLEKHAENL 286
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 287 DKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 346
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +FN + IDG +LTK D D + GAA+S+ +
Sbjct: 347 MTLFVDEAVAGQDAVNRAREFN----------DAAEIDGAILTKADA-DPQGGAAISVAH 395
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL+ + + IV +L+
Sbjct: 396 VTGKPILFLGTGQDYGDLEPFDPEEIVDSLI 426
>gi|336252706|ref|YP_004595813.1| signal recognition particle-docking protein FtsY [Halopiger
xanaduensis SH-6]
gi|335336695|gb|AEH35934.1| signal recognition particle-docking protein FtsY [Halopiger
xanaduensis SH-6]
Length = 494
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 129/210 (61%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP V+VF GVNGVGK+T++AK++ +L + S +MA DT+R+GA EQ++ HA L
Sbjct: 291 EDKPVVIVFTGVNGVGKTTSIAKMSRYLEERGYSTVMANGDTYRAGANEQIQEHADALDT 350
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N DVVL DTAGR+ +E LM L+K+ + +PD+
Sbjct: 351 KCISHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLAKIDRVVDPDMT 410
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+
Sbjct: 411 LFVDEAVAGQDAVNRAREFNEAAE----------IDGAVLTKADA-DSNGGAAISVAHVT 459
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y L++ + +V LL+
Sbjct: 460 GKPILFLGVGQGYDHLERFDPDEMVDRLLE 489
>gi|448320610|ref|ZP_21510096.1| cell division protein FtsY [Natronococcus amylolyticus DSM 10524]
gi|445605512|gb|ELY59434.1| cell division protein FtsY [Natronococcus amylolyticus DSM 10524]
Length = 524
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP V++F GVNGVGK+T++AK++ +L + S ++A DT+R+GA +Q++ HA L
Sbjct: 323 EDKPAVLLFTGVNGVGKTTSIAKLSRYLEERGYSTVLANGDTYRAGANQQIQQHADALDT 382
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A + DVVL DTAGR+ +E LM L K+ + PDL
Sbjct: 383 KCISHEQGGDPAAVLYDAVEYAEAHDVDVVLADTAGRLHTDEGLMDQLEKIDRVVGPDLT 442
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN+ A IDG +L+K D D GAA+S+ +V+
Sbjct: 443 LFVDEAVAGQDAVNRAREFNEAAA----------IDGAILSKADA-DSNGGAAISIAHVT 491
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ+Y DL++ + +V LL
Sbjct: 492 GKPILFLGVGQAYDDLERFDPDEMVDRLL 520
>gi|448315931|ref|ZP_21505569.1| cell division protein FtsY [Natronococcus jeotgali DSM 18795]
gi|445610277|gb|ELY64051.1| cell division protein FtsY [Natronococcus jeotgali DSM 18795]
Length = 446
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP V++F GVNGVGK+T +AK++ +L + S ++A DT+R+GA +Q++ HA L
Sbjct: 246 EDKPAVLLFTGVNGVGKTTTIAKMSRYLEERGYSTVLANGDTYRAGANQQIQEHADALGR 305
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N DVVL DTAGR+ NE LM L K+ + +PDL
Sbjct: 306 KCISHEQGGDPAAVLYDAVEYAEANDVDVVLADTAGRLHTNEGLMDQLEKIDRVVDPDLT 365
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +F++ IDG +LTK D D GAA+S+ +V+
Sbjct: 366 LFVDEAVAGQDAVNRAREFDEAAE----------IDGAILTKADA-DSNGGAAISIAHVT 414
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y DL++ + +V LL+
Sbjct: 415 GKPILFLGVGQGYDDLERFDPDEVVARLLE 444
>gi|448679319|ref|ZP_21690156.1| cell division protein FtsY [Haloarcula argentinensis DSM 12282]
gi|445771417|gb|EMA22474.1| cell division protein FtsY [Haloarcula argentinensis DSM 12282]
Length = 429
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + + +S ++A DT+R+GA EQL HA L
Sbjct: 228 QQADKPVTIVFTGVNGVGKTTSIAKLAQYFEERGLSTVLANGDTYRAGANEQLEKHAENL 287
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 288 DKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 347
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +FN + IDG +LTK D D + GAA+S+ +
Sbjct: 348 MTLFVDEAVAGQDAVNRAREFN----------DAAEIDGAILTKADA-DPQGGAAISVAH 396
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL+ + + IV +L+
Sbjct: 397 VTGKPILFLGTGQDYDDLEPFDPEEIVDSLI 427
>gi|297527350|ref|YP_003669374.1| signal recognition particle-docking protein FtsY [Staphylothermus
hellenicus DSM 12710]
gi|297256266|gb|ADI32475.1| signal recognition particle-docking protein FtsY [Staphylothermus
hellenicus DSM 12710]
Length = 295
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KPY++VF+GVNGVGK+T +AK A + +M A DTFR+GA EQLR H R +
Sbjct: 95 KTKPYIIVFLGVNGVGKTTTIAKTAVLFKEKGFKPLMVAADTFRAGAQEQLRVHGERTGI 154
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+F Y DPA +A +AI+ A G DVVL+DTAGRM + L+ L K+I + P
Sbjct: 155 PVFMGKYGADPASIAFDAIRHAETRGYDVVLIDTAGRMHTDSNLVDELRKIIRVAKPHRK 214
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
+ V +AL GNDA++Q F++ + +D +++TK D + G LS+VY
Sbjct: 215 ILVVDALTGNDAIEQAVFFDKAVG----------VDAVIVTKVDAYEQG-GVPLSIVYSI 263
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++ +G GQ Y DLK N+ + +L
Sbjct: 264 RKPIIMIGVGQGYKDLKPFNIDEFLDKIL 292
>gi|385806306|ref|YP_005842704.1| putative signal recognition particle protein [Fervidicoccus fontis
Kam940]
gi|383796169|gb|AFH43252.1| putative signal recognition particle protein [Fervidicoccus fontis
Kam940]
Length = 307
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 155/264 (58%), Gaps = 22/264 (8%)
Query: 336 EPALKALKDRLMTKNVA-------AMEEALVRIL---TPRRSIDILRDV-HAAKEQRKPY 384
E + LK+ ++ K V +++EALV + P +DI+ + + +++KP+
Sbjct: 52 EEIINTLKNTIIGKRVPKNSDIKESIKEALVDFIKKNIPEPDLDIIEAIKNKQAKEKKPF 111
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
+++F+G+NGVGK+T++AK+A ++ ++ ++ ++ A DTFR+G+ EQL+ HA RL VPI
Sbjct: 112 IIIFMGINGVGKTTSIAKLANYIKKNGMTPLIVAADTFRAGSQEQLQVHADRLGVPIIRA 171
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA +A + I A + VVL+DTAGRM + L+ L K+I + DL L V +
Sbjct: 172 KYNSDPASIAFDGIAYAEKKNIPVVLIDTAGRMHVDRDLINELKKIIDVVGYDLRLLVID 231
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
AL GND+V+Q + + + +G LTK D D K G ALS+ + P+
Sbjct: 232 ALSGNDSVEQAIAYEKNVG----------YEGFFLTKSDA-DTKGGVALSISVETKKPIY 280
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
F+G GQ+Y D+ N + ++KTLL
Sbjct: 281 FLGTGQNYDDIVPFNKEWLIKTLL 304
>gi|448406552|ref|ZP_21573006.1| cell division protein FtsY [Halosimplex carlsbadense 2-9-1]
gi|445677123|gb|ELZ29626.1| cell division protein FtsY [Halosimplex carlsbadense 2-9-1]
Length = 411
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 189/362 (52%), Gaps = 48/362 (13%)
Query: 257 ESKLDFTDP-AGGNGSNIEV-EAADHGESMMDKEEVFSSDSESEEDEEVGKHNKPDAKKT 314
E++ D +P + S+ EV E A GE+ E+ D +E ++E G + D +
Sbjct: 65 ETEADVPEPDTDTDASDAEVDEDAPDGEA---DEDAAGDDEPAEAEDEAGDED--DGRSL 119
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------AMEEALV----RI 361
G + +F + GK +D+ DL+ L L+ L+ +V +E+ LV R
Sbjct: 120 GQRAKLFAT--GKTVIDEDDLQNHLDDLELALLQSDVEMGVAEEILDGVEQNLVGDTRRR 177
Query: 362 LTPRRSI--DILRDV-------------HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
L+ ++ D LR+ E P V++F GVNGVGK+T +AK++ +
Sbjct: 178 LSSTGNLVRDALREALYDVISVGQFDFDERVAEADAPVVIIFTGVNGVGKTTTIAKLSRY 237
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
+S ++A DT+R+GA EQL+ HA L + DPA V +A++ A N
Sbjct: 238 FEDRGLSAVLANGDTYRAGANEQLQQHAEALDKRVISHEQGSDPAAVIYDAVEYAKANDV 297
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVL DTAGR+ ++ LM LSK+ + PD+ LFV EA+ G DAV++ +F+
Sbjct: 298 DVVLGDTAGRLHTSDGLMDQLSKIDRVIGPDMTLFVDEAVAGQDAVNRAREFD------- 350
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+ +DG +LTK D D + GAA+S+ +V+G P++F+G GQ Y DL+ + + IV
Sbjct: 351 ---DAAEVDGAVLTKADA-DPQGGAAISIAHVTGKPILFLGTGQDYGDLEPFDPEDIVDQ 406
Query: 587 LL 588
LL
Sbjct: 407 LL 408
>gi|126179908|ref|YP_001047873.1| signal recognition particle-docking protein FtsY [Methanoculleus
marisnigri JR1]
gi|125862702|gb|ABN57891.1| signal recognition particle-docking protein FtsY [Methanoculleus
marisnigri JR1]
Length = 354
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
+E +P ++F GVNG GK+T +AKV +L + +V++ A DTFR+GA+EQ+RTHA RL
Sbjct: 151 REHERPVKILFTGVNGTGKTTTVAKVGQYLQTNGFTVVIGAGDTFRAGAIEQIRTHADRL 210
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+ + DP+ V +A+Q A + DVVL DTAGR + LM L K+ + PD
Sbjct: 211 GIKTIQHQAGADPSAVLFDAVQYAKAHDIDVVLADTAGRFHNRANLMNQLDKIRRVMKPD 270
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
LV++V EA+ GNDAV + +FN+ + D ++LTK D +D K GAA+S+ +
Sbjct: 271 LVVYVDEAVAGNDAVIRADEFNKAVG----------TDAVVLTKAD-MDPKGGAAISVAH 319
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y D+ +++V LL
Sbjct: 320 TVGKPILFLGTGQGYDDIVPFEPRAVVNELL 350
>gi|448634288|ref|ZP_21674686.1| cell division protein FtsY [Haloarcula vallismortis ATCC 29715]
gi|445749261|gb|EMA00706.1| cell division protein FtsY [Haloarcula vallismortis ATCC 29715]
Length = 429
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + + +S ++A DT+R+GA EQL HA L
Sbjct: 228 QQADKPVTIVFTGVNGVGKTTSIAKLAQYFEERGLSTVLANGDTYRAGANEQLEKHAENL 287
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 288 GKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 347
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +F+ N IDG +LTK D D + GAA+S+ +
Sbjct: 348 MTLFVDEAVAGQDAVNRAREFD----------NAAEIDGAILTKADA-DPQGGAAISVAH 396
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL+ + + IV +L+
Sbjct: 397 VTGKPILFLGTGQDYDDLEPFDPEEIVDSLI 427
>gi|448401694|ref|ZP_21571760.1| cell division protein FtsY [Haloterrigena limicola JCM 13563]
gi|445666384|gb|ELZ19050.1| cell division protein FtsY [Haloterrigena limicola JCM 13563]
Length = 526
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 326 EDKPVTIVFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHADALDT 385
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N D+VL DTAGR+ +E LM L K+ + PD+
Sbjct: 386 KCISHEQGGDPAAVLYDAVEYAEANDIDIVLGDTAGRLHTDEGLMDQLEKIDRVVGPDMT 445
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN IDG +LTK D D GAA+S+ +V+
Sbjct: 446 LFVDEAVAGQDAVNRAREFNDAAE----------IDGAILTKADA-DSNGGAAISIAHVT 494
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y DL++ + + +V LL
Sbjct: 495 GKPILFLGVGQGYDDLERFDPEQMVDRLL 523
>gi|448578866|ref|ZP_21644242.1| cell division protein FtsY [Haloferax larsenii JCM 13917]
gi|445725449|gb|ELZ77073.1| cell division protein FtsY [Haloferax larsenii JCM 13917]
Length = 436
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + +S ++A DT+R+GA EQ+R HA L
Sbjct: 234 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGLSTVLANGDTYRAGANEQIREHADALD 293
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V +A++ A + DVVL DTAGR+ + LM L K+ + PDL
Sbjct: 294 KKLIAHEQGGDPAAVIYDAVEYAEAHDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 353
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+FV EA+ G DAV++ KFN+ A IDG +LTK D D GAA+S+ YV
Sbjct: 354 TIFVDEAVAGQDAVERSRKFNEAAA----------IDGAILTKADA-DSNGGAAISIAYV 402
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y L++ + +++V+ LL
Sbjct: 403 TGKPILFLGVGQGYDHLERFDPEAMVERLL 432
>gi|448357197|ref|ZP_21545903.1| cell division protein FtsY [Natrialba chahannaoensis JCM 10990]
gi|445650005|gb|ELZ02936.1| cell division protein FtsY [Natrialba chahannaoensis JCM 10990]
Length = 490
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP ++F GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 290 EDKPVTIIFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHANALDT 349
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ DPA V +A++ A N D+VL DTAGR+ +E LM L K+ + +PD+
Sbjct: 350 KLITHEQGGDPAAVLYDAVEYAEANDVDIVLGDTAGRLHTDEGLMDQLEKIDRVVDPDMT 409
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN N IDG +LTK D D GAA+S+ +V+
Sbjct: 410 LFVDEAVAGQDAVNRAREFN----------NAAEIDGAILTKADA-DSNGGAAISVAHVT 458
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y +++ + + +V LL+
Sbjct: 459 GRPILFLGVGQGYDHIERFDPEEMVDRLLE 488
>gi|374629552|ref|ZP_09701937.1| signal recognition particle-docking protein FtsY [Methanoplanus
limicola DSM 2279]
gi|373907665|gb|EHQ35769.1| signal recognition particle-docking protein FtsY [Methanoplanus
limicola DSM 2279]
Length = 383
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 140/236 (59%), Gaps = 16/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++ AL+ +L S+ D H KP ++F GVNG GK+T++AKVAY+L +
Sbjct: 162 ALKNALLDVLGEGFSLKDYIDSH-----EKPVKILFTGVNGAGKTTSIAKVAYYLKNNGY 216
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++ + DTFR+GA EQ++THA R+ V + DP+ V +A+ A + DVVL D
Sbjct: 217 SVVIGSGDTFRAGANEQMKTHAERVGVKVINHQEGADPSAVLFDAVSYAKAHDIDVVLGD 276
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + LM+ L K+ + +PD++ +V EA+ GNDAV + +FN +
Sbjct: 277 TAGRFHNKTNLMKQLDKIKRVISPDIISYVDEAVAGNDAVIRAEEFNNSVG--------- 327
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
D ++LTK D +D K GAA+S+ + G PVMF+G GQSY+D+ + +V LL
Sbjct: 328 -TDVVVLTKAD-MDVKGGAAISIAHTIGKPVMFLGTGQSYSDITPFEPEKVVNDLL 381
>gi|448689708|ref|ZP_21695292.1| cell division protein FtsY [Haloarcula japonica DSM 6131]
gi|445777979|gb|EMA28939.1| cell division protein FtsY [Haloarcula japonica DSM 6131]
Length = 428
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + + +S ++A DT+R+GA EQL HA L
Sbjct: 227 QQAEKPVTIVFTGVNGVGKTTSIAKLARYFEERGLSTVLANGDTYRAGANEQLEKHAENL 286
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 287 GKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 346
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +FN IDG +LTK D D + GAA+S+ +
Sbjct: 347 MTLFVDEAVAGQDAVNRAREFNDAAE----------IDGAILTKADA-DPQGGAAISVAH 395
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL+ + + IV +L+
Sbjct: 396 VTGKPILFLGTGQDYDDLEPFDPEEIVDSLI 426
>gi|433637367|ref|YP_007283127.1| signal recognition particle-docking protein FtsY [Halovivax ruber
XH-70]
gi|433289171|gb|AGB14994.1| signal recognition particle-docking protein FtsY [Halovivax ruber
XH-70]
Length = 411
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 15/212 (7%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH--ARR 436
E KP V+VF GVNGVGK+T++AK+ WL S +MA DT+R+GA EQ++ H AR
Sbjct: 210 EAEKPLVIVFTGVNGVGKTTSIAKLDRWLDARGYSTVMANGDTYRAGANEQIKEHAEARG 269
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
++ E+G DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +P
Sbjct: 270 TKLITHEQG--GDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIGRVVDP 327
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D+ LFV EA+ G DAV + +FN+ + +DG +LTK D D GAA+S+
Sbjct: 328 DMTLFVDEAVAGQDAVKRAREFNEAVE----------MDGAILTKADA-DSNGGAAISIA 376
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL++ + + LL
Sbjct: 377 QVTGKPIIFLGVGQGYDDLERFDPDELANRLL 408
>gi|119719346|ref|YP_919841.1| signal recognition particle-docking protein FtsY [Thermofilum
pendens Hrk 5]
gi|119524466|gb|ABL77838.1| signal recognition particle-docking protein FtsY [Thermofilum
pendens Hrk 5]
Length = 302
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 143/248 (57%), Gaps = 14/248 (5%)
Query: 345 RLMTKNVAAMEE--ALVR-ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
R K A ++E AL+R + S+D+ V + + ++F+G NG GK+T +A
Sbjct: 66 RFADKRKALLDELRALIRDVFLSAGSVDLDGLVKRGVAGKGFFSILFLGPNGHGKTTTVA 125
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEA 461
K+AY + V +AA DTFR+G++EQ+ A R + GY DPA VA EA+++
Sbjct: 126 KLAYRFRKQGYRVAIAAADTFRAGSIEQVSQWASRAGAEVVSLGYNADPAAVAYEAVKKG 185
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
+ VVL+DTAGRM + LM + K+ + +PD +FVG+ALVGNDAV+Q F +
Sbjct: 186 EKGDFQVVLIDTAGRMHTKKNLMDEMKKIARVASPDFKVFVGDALVGNDAVEQAKTFFSE 245
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVK 581
+ DG +LTKFD D + GAALS+VYV+ P+++VG GQ DLK+ NV+
Sbjct: 246 VG----------FDGSILTKFDA-DIRGGAALSVVYVTKKPLLYVGTGQGIEDLKEFNVE 294
Query: 582 SIVKTLLK 589
+ L +
Sbjct: 295 EYLGMLFE 302
>gi|448375502|ref|ZP_21558979.1| cell division protein FtsY [Halovivax asiaticus JCM 14624]
gi|445658773|gb|ELZ11589.1| cell division protein FtsY [Halovivax asiaticus JCM 14624]
Length = 419
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 15/212 (7%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH--ARR 436
E KP V+VF GVNGVGK+T++AK+ WL S +MA DT+R+GA EQ++ H AR
Sbjct: 218 EAEKPLVIVFTGVNGVGKTTSIAKLDRWLDARGYSTVMANGDTYRAGANEQIKEHAEARG 277
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
++ E+G DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +P
Sbjct: 278 TKLITHEQG--GDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIGRVVDP 335
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D+ LFV EA+ G DAV + +FN+ + +DG +LTK D D GAA+S+
Sbjct: 336 DMTLFVDEAVAGQDAVKRAREFNEAVE----------MDGAILTKADA-DSNGGAAISIA 384
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL++ + + LL
Sbjct: 385 QVTGKPIIFLGVGQGYDDLERFDPDELANRLL 416
>gi|229579653|ref|YP_002838052.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus Y.G.57.14]
gi|228010368|gb|ACP46130.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus Y.G.57.14]
Length = 208
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K+ KPY+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL HAR L
Sbjct: 8 KKSTKPYIIIFFGINGVGKTTTIAKFAYMLKKNGLSCIISASDTFRAAAQEQLEIHARNL 67
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
++P+ + Y DPA VA +AI+ A G DVVL+DTAGRM + L+ L +++ + P+
Sbjct: 68 EIPLIKGKYGGDPASVAYDAIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNITRPN 127
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L + V ++L GNDA++Q F + D ++LTK D D K G LS+ Y
Sbjct: 128 LKILVLDSLGGNDALEQAKYFKNNVG----------FDLVILTKVDA-DVKGGVILSLAY 176
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV ++G GQ+Y DL N + ++ L
Sbjct: 177 ELNKPVGYLGVGQTYDDLIPFNAEWFIQRLF 207
>gi|389860706|ref|YP_006362946.1| signal recognition particle-docking protein FtsY [Thermogladius
cellulolyticus 1633]
gi|388525610|gb|AFK50808.1| signal recognition particle-docking protein FtsY [Thermogladius
cellulolyticus 1633]
Length = 294
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 122/200 (61%), Gaps = 11/200 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
A +P+ +VF+GVNGVGK+T +AK+AY+L + + +M A DTFR+GA EQL+ H R
Sbjct: 92 AVRSERPFKIVFLGVNGVGKTTTIAKIAYYLKEKGLKPLMVAADTFRAGAQEQLKIHGDR 151
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F Y PA VA ++I A G DVVL+DTAGRM + L+ L K++ + P
Sbjct: 152 IGVPVFTGRYGVSPASVAFDSIAYAKSRGFDVVLIDTAGRMHTDVDLVEELRKVVKVVKP 211
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ + V +AL GNDA++Q FN+K+ +D +++ K D + G +S+V
Sbjct: 212 HMKILVVDALTGNDAIEQARFFNEKVG----------VDAVVIAKVDAYEQG-GVPVSIV 260
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
Y P++F+G GQ Y DLK
Sbjct: 261 YAIKKPILFIGVGQDYKDLK 280
>gi|284998272|ref|YP_003420040.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus L.D.8.5]
gi|284446168|gb|ADB87670.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus L.D.8.5]
Length = 208
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K+ KPY+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL HAR L
Sbjct: 8 KKSTKPYIIIFFGINGVGKTTTIAKFAYMLKKNGLSCIISASDTFRAAAQEQLEIHARNL 67
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
++P+ + Y DPA VA +AI+ A G DVVL+DTAGRM + L+ L +++ + P+
Sbjct: 68 EIPLIKGKYGGDPASVAYDAIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNITRPN 127
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L + V ++L GNDA++Q F + D ++LTK D D K G LS+ Y
Sbjct: 128 LKILVLDSLGGNDALEQAKYFENNVG----------FDLVILTKVDA-DVKGGVILSLAY 176
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV ++G GQ+Y DL N + ++ L
Sbjct: 177 ELNKPVGYLGVGQTYDDLIPFNAEWFIQRLF 207
>gi|448417222|ref|ZP_21579240.1| cell division protein FtsY [Halosarcina pallida JCM 14848]
gi|445678445|gb|ELZ30938.1| cell division protein FtsY [Halosarcina pallida JCM 14848]
Length = 519
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 127/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP + F GVNGVGK+T++AK+A + + +SV++A DT+R+GA EQ+R HA L
Sbjct: 317 EADKPITLTFTGVNGVGKTTSIAKMARYFEKQGLSVVIANGDTYRAGANEQIRKHAENLD 376
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + DVVL DTAGR+ + LM L K+ + +PD+
Sbjct: 377 TKLITHERGGDPAAVIYDGVEYAKAHDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVSPDM 436
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ KFN + IDG +LTK D D GAA+S+ YV
Sbjct: 437 TLFVDEAVAGQDAVERSKKFN----------DAAEIDGAILTKADA-DSNGGAAISIAYV 485
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+++ + + +V LL
Sbjct: 486 TGKPILFLGVGQGYDDIERFDPQLMVDRLL 515
>gi|289581485|ref|YP_003479951.1| signal recognition particle-docking protein FtsY [Natrialba magadii
ATCC 43099]
gi|448283100|ref|ZP_21474379.1| cell division protein FtsY [Natrialba magadii ATCC 43099]
gi|289531038|gb|ADD05389.1| signal recognition particle-docking protein FtsY [Natrialba magadii
ATCC 43099]
gi|445574808|gb|ELY29296.1| cell division protein FtsY [Natrialba magadii ATCC 43099]
Length = 470
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 128/210 (60%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP ++F GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 270 EDKPVTIIFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHANALDT 329
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+
Sbjct: 330 KLITHEQGGDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVDPDMT 389
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN N IDG +LTK D D GAA+S+ +V+
Sbjct: 390 LFVDEAVAGQDAVNRAREFN----------NAAEIDGAILTKADA-DSNGGAAISVAHVT 438
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y +++ + + +V LL+
Sbjct: 439 GRPILFLGVGQGYDHIERFDPEEMVDRLLE 468
>gi|448330529|ref|ZP_21519809.1| cell division protein FtsY [Natrinema versiforme JCM 10478]
gi|445611407|gb|ELY65159.1| cell division protein FtsY [Natrinema versiforme JCM 10478]
Length = 551
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP ++F GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 350 EDKPVTIIFTGVNGVGKTTSIAKMSRYFEERGYSTVMANGDTYRAGANEQIQEHADALDT 409
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N DVVL DTAGR+ NE LM L K+ + +P++
Sbjct: 410 KCISHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTNEGLMDQLEKIGRVVDPNMT 469
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN IDG +LTK D D GAA+S+ +V+
Sbjct: 470 LFVDEAVAGQDAVNRAREFNDAAE----------IDGAILTKADA-DSNGGAAISVAHVT 518
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y DL++ + ++ LL
Sbjct: 519 GKPILFLGVGQGYDDLERFDPDEMIDRLL 547
>gi|429191520|ref|YP_007177198.1| signal recognition particle-docking protein FtsY [Natronobacterium
gregoryi SP2]
gi|448325343|ref|ZP_21514737.1| cell division protein FtsY [Natronobacterium gregoryi SP2]
gi|429135738|gb|AFZ72749.1| signal recognition particle-docking protein FtsY [Natronobacterium
gregoryi SP2]
gi|445615846|gb|ELY69485.1| cell division protein FtsY [Natronobacterium gregoryi SP2]
Length = 390
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 126/210 (60%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T++AK++ + Q S +MA DT+R+GA EQ++ HA L
Sbjct: 188 EDKPVTIVFTGVNGVGKTTSIAKMSRYFEQRGFSAVMANGDTYRAGANEQIQEHADALDT 247
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + PDL
Sbjct: 248 KCISHEQGGDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVGPDLT 307
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN + IDG +LTK D D GAA+S+ +V+
Sbjct: 308 LFVDEAVAGQDAVNRAREFN----------DAAEIDGAILTKADA-DSNGGAAISVAHVT 356
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y L++ + +V+ LL+
Sbjct: 357 GKPILFLGVGQGYDHLERFDPDEMVERLLE 386
>gi|365761361|gb|EHN03020.1| Srp101p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 574
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 148/289 (51%), Gaps = 69/289 (23%)
Query: 297 SEEDEEVGKHNKPDAKKTGWFSSMF----QSIAGKANLDKADLEPALKALKDRLMTKNVA 352
S +DE + ++ ++K +G+ ++ F + + G + + DL+ L LK +L+TKNVA
Sbjct: 272 SHKDEII---SEKESKNSGYVNTAFGFLQKHVLGNKTISENDLKTVLDKLKQQLITKNVA 328
Query: 353 --------------------------------AMEEALVRILTPRRSIDILRDVHAAKEQ 380
++ +AL +ILTP S+D+LR++ + + +
Sbjct: 329 PEAADYLIQQVSRDLVGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSK 388
Query: 381 RK------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
+ PYV VGVNGVGKSTNL+K+A+WLLQ+ V++ ACDTFRSGAVEQLR H
Sbjct: 389 KDSEGKSDPYVFSIVGVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHV 448
Query: 435 RRL----------------------QVPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVL 470
L V +FE GY + +AK+AI+ + D+VL
Sbjct: 449 ENLAQLMDDSHIRGVKNKRGKSGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVL 508
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
+DTAGR ++ LM L PD ++ VGEALVG D+V Q FN
Sbjct: 509 MDTAGRRHNDPTLMSPLKSFADQAQPDKIIMVGEALVGTDSVQQAKNFN 557
>gi|257052404|ref|YP_003130237.1| signal recognition particle-docking protein FtsY [Halorhabdus
utahensis DSM 12940]
gi|256691167|gb|ACV11504.1| signal recognition particle-docking protein FtsY [Halorhabdus
utahensis DSM 12940]
Length = 394
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP V+VF GVNGVGK+T +AK+A +L S ++A DT+R+GA +QL HA L VP
Sbjct: 195 EKPVVIVFTGVNGVGKTTTIAKLAQYLEDRGHSSVLANGDTYRAGANQQLGEHAEALDVP 254
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
DP V +A++ A N DVVL DTAGR+ +E LM LSK+ + PD+ L
Sbjct: 255 YISHEQGGDPTAVIYDAVEYAEANDVDVVLGDTAGRLHTSEGLMDQLSKIERIIEPDMTL 314
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV EA+ G DAV + ++F+ IDG +LTK D D + GAA+S+ +V+G
Sbjct: 315 FVDEAVAGQDAVTRATEFDAAAE----------IDGTILTKADA-DPQGGAAISIAHVTG 363
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTL 587
P++F+G GQ Y L++ + + +V L
Sbjct: 364 KPILFLGTGQGYDHLERFDPEEVVDQL 390
>gi|448308046|ref|ZP_21497927.1| cell division protein FtsY, partial [Natronorubrum bangense JCM
10635]
gi|445594458|gb|ELY48612.1| cell division protein FtsY, partial [Natronorubrum bangense JCM
10635]
Length = 314
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 126/209 (60%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 114 EDKPVTIVFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHADALDT 173
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + PD+
Sbjct: 174 KLIAHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLEKIDRVVGPDMT 233
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN N IDG +LTK D D GAA+S+ +V+
Sbjct: 234 LFVDEAVAGQDAVNRAREFN----------NAAAIDGAILTKADA-DSNGGAAISVAHVT 282
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y DL++ + +V LL
Sbjct: 283 GKPILFLGVGQGYDDLERFDPDEMVDRLL 311
>gi|448347037|ref|ZP_21535916.1| cell division protein FtsY [Natrinema altunense JCM 12890]
gi|445631374|gb|ELY84606.1| cell division protein FtsY [Natrinema altunense JCM 12890]
Length = 544
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP ++F GVNGVGK+T++AK++ + S +MA DT+R+GA EQ++ HA L
Sbjct: 344 KPITIIFTGVNGVGKTTSIAKLSRYFEDRGYSSVMANGDTYRAGANEQIQEHADALDTKC 403
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+ LF
Sbjct: 404 ISHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLEKIGRVVDPDMTLF 463
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+G
Sbjct: 464 VDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVTGK 512
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G GQ Y DL++ + +V LL
Sbjct: 513 PILFLGVGQGYDDLERFDPDEMVDRLL 539
>gi|397772090|ref|YP_006539636.1| signal recognition particle-docking protein FtsY [Natrinema sp.
J7-2]
gi|397681183|gb|AFO55560.1| signal recognition particle-docking protein FtsY [Natrinema sp.
J7-2]
Length = 537
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP ++F GVNGVGK+T++AK++ + S +MA DT+R+GA EQ++ HA L
Sbjct: 337 KPITIIFTGVNGVGKTTSIAKLSRYFEDRGYSSVMANGDTYRAGANEQIQEHADALDTKC 396
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+ LF
Sbjct: 397 ISHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLEKIGRVVDPDMTLF 456
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+G
Sbjct: 457 VDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVTGK 505
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G GQ Y DL++ + +V LL
Sbjct: 506 PILFLGVGQGYDDLERFDPDEMVDRLL 532
>gi|448342482|ref|ZP_21531433.1| cell division protein FtsY [Natrinema gari JCM 14663]
gi|445625859|gb|ELY79213.1| cell division protein FtsY [Natrinema gari JCM 14663]
Length = 538
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP ++F GVNGVGK+T++AK++ + S +MA DT+R+GA EQ++ HA L
Sbjct: 338 KPITIIFTGVNGVGKTTSIAKLSRYFEDRGYSSVMANGDTYRAGANEQIQEHADALDTKC 397
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+ LF
Sbjct: 398 ISHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLEKIGRVVDPDMTLF 457
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+G
Sbjct: 458 VDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVTGK 506
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G GQ Y DL++ + +V LL
Sbjct: 507 PILFLGVGQGYDDLERFDPDEMVDRLL 533
>gi|429965303|gb|ELA47300.1| hypothetical protein VCUG_01184 [Vavraia culicis 'floridensis']
Length = 428
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 156/261 (59%), Gaps = 33/261 (12%)
Query: 340 KALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRK--------PYVVVFVGV 391
+AL L+ KNVA E +L SID +R+ + + K PY V VG
Sbjct: 187 EALLTHLLNKNVAP--EVAGDVLMYAESIDDVRETMRSIVRTKILGEGGGVPYRVALVGT 244
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----QVPIFEKGYE 447
NGVGK+T L+K+ Y +H SV +AACDTFR+GA+EQL+T+ RL ++ I ++GY
Sbjct: 245 NGVGKTTTLSKLCYHFAKHDKSVYVAACDTFRAGAIEQLQTYVNRLKINHKIDIHQQGYN 304
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
K+ VA+ A+Q DV+LVDTAGR+ + +PL+ +L KL L D V++V EAL
Sbjct: 305 KEEWKVARSALQHG--KAYDVILVDTAGRV-NKKPLIDSLRKLTSLGFDD-VVYVSEALK 360
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
G + D L+ F+ ++ I++TK DT+DD++G+ L++ Y S PV+F+G
Sbjct: 361 GYEK-DVLA-FD-------------MVTAIIVTKIDTVDDRIGSILNLCYFSKKPVVFLG 405
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
GQS DL+K++V+ ++ TLL
Sbjct: 406 HGQSNVDLEKVDVEKVIDTLL 426
>gi|257387285|ref|YP_003177058.1| signal recognition particle-docking protein FtsY [Halomicrobium
mukohataei DSM 12286]
gi|257169592|gb|ACV47351.1| signal recognition particle-docking protein FtsY [Halomicrobium
mukohataei DSM 12286]
Length = 367
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 166/291 (57%), Gaps = 39/291 (13%)
Query: 326 GKANLDKADLEPALKALKDRLMTKNV---------AAMEEALV----RILTPRRSI--DI 370
GK+ +D+ DL+ L L+ L++ +V + +EE LV R L+ ++ D
Sbjct: 86 GKSIIDEEDLQDHLDDLELALLSSDVEMGVAGEILSGVEENLVGETRRRLSSTGNLVRDA 145
Query: 371 LR----DVHAAK----EQR-----KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
LR DV + EQR KP V++F GVNGVGK+T +AK++ L +S ++A
Sbjct: 146 LRESLYDVISVGQFDFEQRIRAADKPVVIIFTGVNGVGKTTTIAKLSERLEGQGLSTVLA 205
Query: 418 ACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
DT+R+GA EQL+ HA L + DPA V +A++ A N +DVVL DTAGR+
Sbjct: 206 NGDTYRAGANEQLQKHADNLDRTLISHEQGSDPAAVIYDAVEYAEANDTDVVLGDTAGRL 265
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
++ LM L K+ + +PD+ +FV EA+ G DAV++ +F++ IDG
Sbjct: 266 HTSDDLMAQLEKIDRVIDPDMTIFVDEAVAGQDAVNRAREFDEAAE----------IDGA 315
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+LTK D D + GAA+S+ +V+G P++F+G GQ Y DL++ + + +V LL
Sbjct: 316 VLTKADA-DPQGGAAISIAHVTGKPILFLGTGQGYDDLERFDPEEVVDRLL 365
>gi|254167609|ref|ZP_04874460.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
boonei T469]
gi|289596933|ref|YP_003483629.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
boonei T469]
gi|197623418|gb|EDY35982.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
boonei T469]
gi|289534720|gb|ADD09067.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
boonei T469]
Length = 307
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 11/199 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
+P V++F+GVNG GK+T +AK+A +L SV+MAA DTFR+GA+EQ+ H L + +
Sbjct: 110 RPTVIMFLGVNGTGKTTVIAKLAKYLKDKGYSVVMAAGDTFRAGAIEQISIHGDNLGIKV 169
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+ DPA V +AI+ A D VL+DTAGRMQ N LM + K+ + P L +F
Sbjct: 170 IKHQAGGDPAAVCYDAIEHAKAKHRDFVLIDTAGRMQTNRNLMEEMKKIKRVAKPHLTIF 229
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
VG+AL GNDA++Q KF + + ID ++L K D D K GAALS+ Y
Sbjct: 230 VGDALAGNDAIEQAKKFEEAVG----------IDAVILNKVDA-DAKGGAALSIAYELNK 278
Query: 562 PVMFVGCGQSYTDLKKLNV 580
P++F+G GQ Y DL +V
Sbjct: 279 PIIFLGNGQKYDDLMIFDV 297
>gi|448388357|ref|ZP_21565212.1| cell division protein FtsY [Haloterrigena salina JCM 13891]
gi|445670493|gb|ELZ23093.1| cell division protein FtsY [Haloterrigena salina JCM 13891]
Length = 515
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ+ HA L +
Sbjct: 316 KPVTIVFTGVNGVGKTTSIAKLSRYFEERGYSTVMANGDTYRAGANEQIEQHAEALGTKL 375
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V + ++ A N DVVL DTAGR+ NE LM L K+ + PD+ LF
Sbjct: 376 ITHEQGGDPAAVLYDGVEYAEANDIDVVLGDTAGRLHTNEGLMDQLEKIDRVVGPDMTLF 435
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+G
Sbjct: 436 VDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVTGK 484
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P++F+G GQ Y D+ + + +V LL+
Sbjct: 485 PILFLGVGQGYDDIDPFDPEEMVDRLLE 512
>gi|333988046|ref|YP_004520653.1| signal recognition particle-docking protein FtsY [Methanobacterium
sp. SWAN-1]
gi|333826190|gb|AEG18852.1| signal recognition particle-docking protein FtsY [Methanobacterium
sp. SWAN-1]
Length = 429
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 141/223 (63%), Gaps = 12/223 (5%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+++A+ IL DI + +++ +P ++FVG+NG GK+T +AKVA + ++
Sbjct: 204 ALKKAISEILDVDNK-DITEMLDESRKNGEPLKLMFVGINGTGKTTTIAKVATYFIEKGY 262
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
++AA DTFR+GA+EQ+ HA ++ V I + DPA VA +A+ A G D+VL+D
Sbjct: 263 EPVIAASDTFRAGAIEQITHHADKIGVKIIKHQKGADPAAVAYDAVAHAKAKGKDMVLID 322
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRMQ N LM + K+ + +P+L+++VG+AL GNDAV+Q KF++ +
Sbjct: 323 TAGRMQTNINLMDEMKKIKRVVSPELIIYVGDALTGNDAVEQARKFDEAVG--------- 373
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+DGI+LTK D + GAALS+ Y+ P++F+G GQ+Y D+
Sbjct: 374 -VDGIILTK-ADADARGGAALSIGYIIQKPILFLGVGQAYEDI 414
>gi|55379684|ref|YP_137534.1| signal recognition particle receptor [Haloarcula marismortui ATCC
43049]
gi|55232409|gb|AAV47828.1| signal recognition particle receptor [Haloarcula marismortui ATCC
43049]
Length = 429
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + +S ++A DT+R+GA EQL HA L
Sbjct: 228 QQADKPVTIVFTGVNGVGKTTSIAKLAQYFEDRGLSTVLANGDTYRAGANEQLEKHAENL 287
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 288 DKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 347
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +FN IDG +LTK D D + GAA+S+ +
Sbjct: 348 MTLFVDEAVAGQDAVNRAREFNDAAE----------IDGAILTKADA-DPQGGAAISVAH 396
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL + + IV +L+
Sbjct: 397 VTGKPILFLGTGQDYDDLDPFDPEEIVDSLI 427
>gi|448655661|ref|ZP_21682253.1| cell division protein FtsY [Haloarcula californiae ATCC 33799]
gi|445764119|gb|EMA15280.1| cell division protein FtsY [Haloarcula californiae ATCC 33799]
Length = 429
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + +S ++A DT+R+GA EQL HA L
Sbjct: 228 QQADKPVTIVFTGVNGVGKTTSIAKLAQYFEDRGLSTVLANGDTYRAGANEQLEKHAENL 287
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 288 DKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 347
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +FN IDG +LTK D D + GAA+S+ +
Sbjct: 348 MTLFVDEAVAGQDAVNRAREFNDAAE----------IDGAILTKADA-DPQGGAAISVAH 396
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL + + IV +L+
Sbjct: 397 VTGKPILFLGTGQDYDDLDPFDPEEIVDSLI 427
>gi|118786|sp|P27414.1|FTSY_SULAC RecName: Full=Signal recognition particle receptor FtsY; Short=SRP
receptor; AltName: Full=Docking protein; AltName:
Full=P41
gi|81120|pir||S16482 docking protein - Sulfolobus solfataricus
gi|1333819|emb|CAA54643.1| signal recognition particle receptor alpha subunit [Sulfolobus
acidocaldarius]
gi|3980227|emb|CAA41429.1| docking protein [Sulfolobus solfataricus]
Length = 369
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 143/251 (56%), Gaps = 24/251 (9%)
Query: 336 EPALKALKDRLMTKNVAAMEE-----------ALVRILTPRRSIDILRDVHAAKEQRKPY 384
E L+ LK+ L+ K V+ EE ++ ILT + D++ + ++ +KP+
Sbjct: 117 EKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSG--KKPF 174
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++F GVNGVGK+T +AKV L ++ +S ++AA DTFR+ A EQL HA +L+V +
Sbjct: 175 VIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRG 234
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA VA +AI A DVVL+DTAGRM + L+ L +++ + PD + + +
Sbjct: 235 KYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKRVLRIAKPDFRILILD 294
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L G+DA++Q F + D ++LTK D D K G ALS+ Y PV+
Sbjct: 295 SLAGSDALEQARHFENNVG----------YDAVILTKVDA-DAKGGIALSLAYELKKPVV 343
Query: 565 FVGCGQSYTDL 575
++G GQ+Y DL
Sbjct: 344 YMGVGQNYDDL 354
>gi|448589274|ref|ZP_21649433.1| cell division protein FtsY [Haloferax elongans ATCC BAA-1513]
gi|445735702|gb|ELZ87250.1| cell division protein FtsY [Haloferax elongans ATCC BAA-1513]
Length = 435
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
+E KP ++F G+NGVGK+T +AK+A + + +S ++A DT+R+GA EQ++ HA L
Sbjct: 232 QEADKPVTLIFTGINGVGKTTTIAKLARYFEKQGLSTVLANGDTYRAGANEQIQEHADAL 291
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+ DPA V +A++ A + DVVL DTAGR+ + LM L K+ + PD
Sbjct: 292 DKKLIAHEQGGDPAAVIYDAVEYAEAHDIDVVLGDTAGRLHTSNDLMAQLEKIDRVVGPD 351
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L +FV EA+ G DAV++ KFN+ A IDG +LTK D D GAA+S+ Y
Sbjct: 352 LTIFVDEAVAGQDAVERSRKFNEAAA----------IDGAILTKADA-DSNGGAAISIAY 400
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y L++ + +++V+ LL
Sbjct: 401 VTGKPILFLGVGQGYDHLERFDPEAMVERLL 431
>gi|1095511|prf||2109236F dpa gene
Length = 369
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 143/251 (56%), Gaps = 24/251 (9%)
Query: 336 EPALKALKDRLMTKNVAAMEE-----------ALVRILTPRRSIDILRDVHAAKEQRKPY 384
E L+ LK+ L+ K V+ EE ++ ILT + D++ + ++ +KP+
Sbjct: 117 EKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSG--KKPF 174
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++F GVNGVGK+T +AKV L ++ +S ++AA DTFR+ A EQL HA +L+V +
Sbjct: 175 VIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRG 234
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
Y DPA VA +AI A DVVL+DTAGRM + L+ L +++ + PD + + +
Sbjct: 235 KYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKRVLRIAKPDFRILILD 294
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
+L G+DA++Q F + D ++LTK D D K G ALS+ Y PV+
Sbjct: 295 SLAGSDALEQARHFENNVG----------YDAVILTKVDA-DAKGGIALSLAYELKKPVV 343
Query: 565 FVGCGQSYTDL 575
++G GQ+Y DL
Sbjct: 344 YMGVGQNYDDL 354
>gi|448731427|ref|ZP_21713727.1| cell division protein FtsY [Halococcus saccharolyticus DSM 5350]
gi|445792180|gb|EMA42792.1| cell division protein FtsY [Halococcus saccharolyticus DSM 5350]
Length = 437
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 134/235 (57%), Gaps = 11/235 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+EEAL L S+ E KP +VF G+NGVGK+T +AK+A + + +S
Sbjct: 210 VEEALAEALREVISVGQFDFDERIAEADKPVTIVFTGINGVGKTTTIAKLARYFEERGLS 269
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++A DT+R+GA EQL HA RL + DPA V +A++ A N DVVL DT
Sbjct: 270 TVLANGDTYRAGANEQLGEHADRLGKKLIAHDQGSDPAAVLYDAVEYAEANDIDVVLGDT 329
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ + LM L+K+ + +PD+ LFV EA+ G DA ++ +F+ A
Sbjct: 330 AGRLHTSNDLMAQLAKIDRVVDPDMTLFVDEAVAGQDATNRAEEFDDAAA---------- 379
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +L K D D + GAA+S+ +V+G P++F+G GQ Y D+++ + +V LL
Sbjct: 380 IDGAILAKADA-DSQGGAAISIAHVTGKPILFLGTGQGYDDIERFDPDVLVDRLL 433
>gi|300709656|ref|YP_003735470.1| signal recognition particle-docking protein FtsY [Halalkalicoccus
jeotgali B3]
gi|448297573|ref|ZP_21487619.1| cell division protein FtsY [Halalkalicoccus jeotgali B3]
gi|299123339|gb|ADJ13678.1| signal recognition particle-docking protein FtsY [Halalkalicoccus
jeotgali B3]
gi|445579882|gb|ELY34275.1| cell division protein FtsY [Halalkalicoccus jeotgali B3]
Length = 397
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 16/261 (6%)
Query: 328 ANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVV 387
ANL + +LE A + + + + A+ EAL+ +++ + D + AA+ KP ++
Sbjct: 151 ANL-RDELENATRGMTQTVEERVDQALREALLEVISVGQ-FDFDERIAAAE---KPVTLI 205
Query: 388 FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYE 447
F GVNGVGK+T++AK++ +L + S ++A DT+R+GA EQ+R HAR L +
Sbjct: 206 FTGVNGVGKTTSIAKLSQYLEERGYSTVLANGDTYRAGANEQIREHARNLDTKLISHEQG 265
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
DPA V +A++ A +G DVVL DTAGR+ NE LM L K+ + PD+ LF EA+
Sbjct: 266 GDPAAVIYDAVEYAQAHGIDVVLGDTAGRLHTNEGLMDQLEKIDRVVGPDMTLFTDEAVA 325
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
G DAV + KFN IDG +LTK D + AA+S+ YV+G P++F+G
Sbjct: 326 GQDAVQRAKKFNDAAE----------IDGAILTKADADANGG-AAISIAYVTGKPILFLG 374
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
GQ Y D+++ + +V LL
Sbjct: 375 TGQGYDDIERFDPDWLVDQLL 395
>gi|229581681|ref|YP_002840080.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus Y.N.15.51]
gi|228012397|gb|ACP48158.1| signal recognition particle-docking protein FtsY [Sulfolobus
islandicus Y.N.15.51]
Length = 208
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K+ KPY+++F G+NGVGK+T +AK AY L ++ +S +++A DTFR+ A EQL HAR L
Sbjct: 8 KKSTKPYIIIFFGINGVGKTTTIAKFAYILKKNGLSCIISASDTFRAAAQEQLEIHARNL 67
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
++P+ + Y DPA VA + I+ A G DVVL+DTAGRM + L+ L +++ + P+
Sbjct: 68 EIPLIKGKYGGDPASVAYDTIRAAKSRGIDVVLIDTAGRMHTDTDLVNELKRVVNITRPN 127
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L + V ++L GNDA++Q F + D ++LTK D D K G LS+ Y
Sbjct: 128 LKILVLDSLGGNDALEQAKYFENNVG----------FDLVILTKVDA-DVKGGVILSLAY 176
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV ++G GQ+Y DL N + ++ L
Sbjct: 177 ELNKPVGYLGVGQTYDDLIPFNAEWFIQRLF 207
>gi|448641496|ref|ZP_21678106.1| cell division protein FtsY [Haloarcula sinaiiensis ATCC 33800]
gi|445760910|gb|EMA12166.1| cell division protein FtsY [Haloarcula sinaiiensis ATCC 33800]
Length = 429
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ KP +VF GVNGVGK+T++AK+A + +S ++A DT+R+GA EQL HA L
Sbjct: 228 QQADKPVTIVFTGVNGVGKTTSIAKLAQYFEDRGLSSVLANGDTYRAGANEQLEKHAENL 287
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
I DP V +A++ A N DVVL DTAGR+ ++ LM L K+ +PD
Sbjct: 288 DKKIITHEQGSDPTAVVYDAVEYAKANDIDVVLGDTAGRLHTSDDLMAQLEKIDRNIDPD 347
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+ LFV EA+ G DAV++ +FN IDG +LTK D D + GAA+S+ +
Sbjct: 348 MTLFVDEAVAGQDAVNRAREFNDAAE----------IDGAILTKADA-DPQGGAAISVAH 396
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P++F+G GQ Y DL + + IV +L+
Sbjct: 397 VTGKPILFLGTGQDYDDLDPFDPEEIVDSLI 427
>gi|383619912|ref|ZP_09946318.1| cell division protein FtsY [Halobiforma lacisalsi AJ5]
gi|448696537|ref|ZP_21697949.1| cell division protein FtsY [Halobiforma lacisalsi AJ5]
gi|445783165|gb|EMA34000.1| cell division protein FtsY [Halobiforma lacisalsi AJ5]
Length = 429
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T +AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 228 EDKPVTIVFTGVNGVGKTTTIAKLSRYFEERGYSTVMANGDTYRAGANEQIQEHADALDT 287
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+
Sbjct: 288 KCISHEQGGDPAAVLYDAVEYAEANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVDPDMT 347
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+
Sbjct: 348 LFVDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVT 396
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
G P++F+G GQ Y L++ + +V LL+
Sbjct: 397 GKPILFLGVGQGYDHLERFDPDEMVDRLLE 426
>gi|307594172|ref|YP_003900489.1| signal recognition particle-docking protein FtsY [Vulcanisaeta
distributa DSM 14429]
gi|307549373|gb|ADN49438.1| signal recognition particle-docking protein FtsY [Vulcanisaeta
distributa DSM 14429]
Length = 305
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 134/221 (60%), Gaps = 11/221 (4%)
Query: 368 IDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 427
+D + +V + +KP V++F+G NG GK+T +AK+ + L++ + + AA DT+R+GA+
Sbjct: 95 VDFMSEVIRLLQMKKPVVLLFLGPNGYGKTTTIAKITHQLMKRGYTAVWAAADTYRAGAI 154
Query: 428 EQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
EQL HA +L V + + GY DPA VA +AI A G D V++DTAGRM + LM L
Sbjct: 155 EQLEGHATKLGVRVIKHGYGSDPAAVAYDAINHAKVRGIDYVMIDTAGRMHTDINLMNEL 214
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
SK+ ++ PDL +F+ +AL+GN+A+D ++K+ K IDG+++TK D
Sbjct: 215 SKIQRVSRPDLSIFIADALLGNEALD-IAKYYSKYVK---------IDGLIVTKVDAY-P 263
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
K GA L+ +Y P+ F+G GQ Y DL+ + + L+
Sbjct: 264 KGGAILTFLYELKKPIYFLGVGQGYDDLRPFSKAEFFRQLI 304
>gi|448705034|ref|ZP_21700721.1| cell division protein FtsY [Halobiforma nitratireducens JCM 10879]
gi|445795937|gb|EMA46456.1| cell division protein FtsY [Halobiforma nitratireducens JCM 10879]
Length = 420
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 126/209 (60%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T +AK++ + + +MA DT+R+GA EQ++ HA L++
Sbjct: 212 EDKPVTIVFTGVNGVGKTTTIAKMSRYFEERGYDAVMANGDTYRAGANEQIQEHADALEM 271
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PDL
Sbjct: 272 KCISHEQGGDPAAVLYDAVEYADANDVDVVLGDTAGRLHTDEGLMDQLEKIDRVVDPDLT 331
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
LFV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+
Sbjct: 332 LFVDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVT 380
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y +++ + + +V LL
Sbjct: 381 GKPILFLGVGQGYDHIERFDPEEMVDRLL 409
>gi|448312318|ref|ZP_21502065.1| cell division protein FtsY [Natronolimnobius innermongolicus JCM
12255]
gi|445601918|gb|ELY55899.1| cell division protein FtsY [Natronolimnobius innermongolicus JCM
12255]
Length = 505
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP +VF GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ+ HA L
Sbjct: 302 EAEKPVTIVFTGVNGVGKTTSIAKLSRYFEERGYSSVMANGDTYRAGANEQIEEHAEALD 361
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N D+VL DTAGR+ +E LM L K+ + +PD+
Sbjct: 362 TKLITHEQGGDPAAVLYDGVEYAEANDIDIVLGDTAGRLHTDEGLMDQLEKIDRVVDPDM 421
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN + DG +LTK D D GAA+S+ +V
Sbjct: 422 TLFVDEAVAGQDAVNRAREFN----------DAAETDGAILTKADA-DSNGGAAISIAHV 470
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+G P++F+G GQ Y D++ + +V LL+
Sbjct: 471 TGKPILFLGVGQGYDDIEPFDPDEMVDRLLR 501
>gi|15791234|ref|NP_281058.1| signal recognition particle receptor [Halobacterium sp. NRC-1]
gi|169236990|ref|YP_001690190.1| signal recognition particle receptor SRalpha [Halobacterium
salinarum R1]
gi|10581862|gb|AAG20538.1| signal recognition particle receptor [Halobacterium sp. NRC-1]
gi|167728056|emb|CAP14844.1| signal recognition particle receptor SRalpha [Halobacterium
salinarum R1]
Length = 373
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 168/313 (53%), Gaps = 43/313 (13%)
Query: 308 KPDA---KKTGWFSSMFQSIA-GKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRI 361
+PDA + + F S S+A G+ +D+ADLE L+ L+ L+ +V + +EE L +I
Sbjct: 67 QPDADDEESSAGFVSRAASMARGRVVIDEADLEAPLRELEFALLESDVEMSVVEEILDQI 126
Query: 362 ----LTPRRSI---------DILRD-------------VHAAKEQRKPYVVVFVGVNGVG 395
+ R D LR+ V + KP +VF GVNGVG
Sbjct: 127 RGDLVGEERKFTESTDTLIEDALREALLSVIDVGQFDLVDEIESTSKPVTIVFTGVNGVG 186
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +AK+A +L S ++A DT+R+GA +Q+ HA L V DP V
Sbjct: 187 KTTTIAKLARYLESEGFSSVLANGDTYRAGANQQIEEHAEALGVKCITHEQGGDPTAVVY 246
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
+A++ A N DVVL DTAGR+ ++ LM L KL + +PD+ +FV EA+ G DAV++
Sbjct: 247 DAVEYADANDVDVVLGDTAGRLHTSDDLMSQLEKLDRVVDPDVTVFVDEAVAGQDAVNRA 306
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+F++ A +DG +LT D D + GAA+S+ +V+G P++F+G GQ+Y DL
Sbjct: 307 REFDEASA----------VDGTILTMADA-DSQGGAAISVSHVTGKPILFLGTGQAYEDL 355
Query: 576 KKLNVKSIVKTLL 588
+ + ++V LL
Sbjct: 356 EPFDPDALVDDLL 368
>gi|448732198|ref|ZP_21714480.1| cell division protein FtsY [Halococcus salifodinae DSM 8989]
gi|445805110|gb|EMA55337.1| cell division protein FtsY [Halococcus salifodinae DSM 8989]
Length = 451
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP +VF G+NGVGK+T +AK+A + + +S ++A DT+R+GA EQL HA RL +
Sbjct: 252 KPVTIVFTGINGVGKTTTIAKLARYFEERGLSTVLANGDTYRAGANEQLGEHADRLGKKL 311
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V +A++ A N DVVL DTAGR+ + LM L+K+ + +PD+ LF
Sbjct: 312 IAHDQGSDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTSNDLMAQLAKIDRVVDPDMTLF 371
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DA ++ +F+ A IDG +L K D D + GAA+S+ +V+G
Sbjct: 372 VDEAVAGQDATNRAEEFDDAAA----------IDGAILAKADA-DSQGGAAISIAHVTGK 420
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G GQ Y D+++ + +V LL
Sbjct: 421 PILFLGTGQGYDDIERFDPDVLVDRLL 447
>gi|448303915|ref|ZP_21493861.1| cell division protein FtsY [Natronorubrum sulfidifaciens JCM 14089]
gi|445592542|gb|ELY46729.1| cell division protein FtsY [Natronorubrum sulfidifaciens JCM 14089]
Length = 436
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP +VF GVNGVGK+T++AK++ + S +MA DT+R+GA EQ++ HA L
Sbjct: 236 EDKPVTIVFTGVNGVGKTTSIAKLSRYFEARGYSTVMANGDTYRAGANEQIQEHADALDT 295
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + PD+
Sbjct: 296 KLIAHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLEKIDRVVGPDMT 355
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
+FV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ +V+
Sbjct: 356 IFVDEAVAGQDAVNRAREFNDAAA----------IDGAILTKADA-DSNGGAAISVAHVT 404
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ Y D+++ + +V LL
Sbjct: 405 GKPILFLGVGQGYDDIERFDPDQMVDRLL 433
>gi|88604250|ref|YP_504428.1| signal recognition particle-docking protein FtsY [Methanospirillum
hungatei JF-1]
gi|88189712|gb|ABD42709.1| signal recognition particle-docking protein FtsY [Methanospirillum
hungatei JF-1]
Length = 353
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 140/236 (59%), Gaps = 16/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +AL+ +L +DI + +E +P ++F GVNG GK+T++AKV +L ++
Sbjct: 131 ALSDALLGVLG--EGVDICAFI---REHERPVKILFTGVNGTGKTTSIAKVTRFLQKNGF 185
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++ A DTFR+GA+EQ+ H RL V + + DP V + ++ A + DVVL D
Sbjct: 186 SVVLGAGDTFRAGAIEQIDVHGERLGVKVIQHQEGSDPTAVLFDTVEYARAHKIDVVLGD 245
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + LM L+K+ + NPDL+++V EA+ GNDAV + +F + +
Sbjct: 246 TAGRFHNRANLMNQLAKIRRVINPDLIVYVDEAVAGNDAVIRAEEFAKSVG--------- 296
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+D I+LTK D +D K GAA+S+ Y G P++F+G GQ Y D+ N + +V LL
Sbjct: 297 -MDAIMLTKVD-MDPKGGAAISVAYAVGKPLLFIGTGQGYDDVMAFNPRLVVADLL 350
>gi|290559218|gb|EFD92569.1| signal recognition particle receptor [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 386
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 125/197 (63%), Gaps = 11/197 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
+ +KP+V++ +GVNG GK+T +AK+ L + ++AA DTFR+ ++EQL HA++L+
Sbjct: 178 KSKKPFVILVIGVNGAGKTTTIAKLCKLFLSKGLKPVIAAGDTFRAASIEQLEIHAKKLK 237
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
VPI + Y DPA VA +AI+ A DVV++DTAGR N+ L+ L K+ ++ PD+
Sbjct: 238 VPIIKHTYGSDPAAVAFDAIKHANSAKEDVVVIDTAGRSDINKNLIEELKKVKRVSKPDM 297
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+F+G+AL GND V Q +++++ ID +L+K D +D K GA LS+ Y+
Sbjct: 298 TIFIGDALTGNDVVKQAEVYDKEIG----------IDANILSKAD-VDKKGGAVLSISYI 346
Query: 559 SGAPVMFVGCGQSYTDL 575
+ P++F+G GQ DL
Sbjct: 347 TKKPILFLGVGQGSDDL 363
>gi|119871975|ref|YP_929982.1| signal recognition particle-docking protein FtsY [Pyrobaculum
islandicum DSM 4184]
gi|119673383|gb|ABL87639.1| signal recognition particle-docking protein FtsY [Pyrobaculum
islandicum DSM 4184]
Length = 307
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EAL+ +L +D ++ E+ +P+VV+F+G NG GK+T LAK+A+ L +
Sbjct: 80 AVYEALLNVLGDVPDVDFYKEAREMLEKTRPFVVMFLGPNGYGKTTTLAKLAFHLQEMGF 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V+ AA DTFR+GA EQL H RR+ + Y DPA VA +AIQ A G VL+D
Sbjct: 140 RVVAAAADTFRAGAREQLEEHGRRVGFRVVGGAYGSDPAAVAYDAIQHAKSRGYHFVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + P +FV +A +GN+A+ +++K+ K +
Sbjct: 200 TAGRMHTDTNLMDELRKIQRVAEPHRSIFVFDAQLGNEAL-EIAKYYSKYVN-------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ TK D K G+ L+ +YV PV F+G GQ+Y DL K + + LL
Sbjct: 251 -IDGMIATKVDAY-PKGGSILTFIYVLKRPVYFLGVGQTYRDLVKFSKAEYISQLL 304
>gi|354609780|ref|ZP_09027736.1| signal recognition particle-docking protein FtsY [Halobacterium sp.
DL1]
gi|353194600|gb|EHB60102.1| signal recognition particle-docking protein FtsY [Halobacterium sp.
DL1]
Length = 399
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 157/303 (51%), Gaps = 41/303 (13%)
Query: 315 GWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSI------ 368
G+ SS G+ + + DLE L+ L+ L+ +V M A + T R +
Sbjct: 107 GFLSSATSFAKGRVKIHEDDLEEPLRELEFALLESDVE-MSVADEIVETIREDLVGAERK 165
Query: 369 ----------DILRDV-------------HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
D LRD A KP VVF GVNGVGK+T++AK+
Sbjct: 166 FTESTDELVEDALRDALLSVIDVGHFDFDEAIATAEKPVTVVFTGVNGVGKTTSIAKLGK 225
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
+L S ++A DT+R+GA EQ++ HA L + + DP V +A++ A N
Sbjct: 226 YLEDRGYSTVLANGDTYRAGANEQIQEHADNLGLKLIRHEQGGDPTAVIYDAVEYAEAND 285
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DVVL DTAGR+ + LM L KL + +PDL LFV EA+ G DAV++ +F++ +
Sbjct: 286 VDVVLGDTAGRLHTSNDLMSQLEKLGRVVDPDLTLFVDEAVAGQDAVNRAREFDEAAS-- 343
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
+DG +LT D D + GAA+S+ V+G P++F+G GQ Y DL+K + +++V+
Sbjct: 344 --------VDGTILTMADA-DSQGGAAISVAQVTGKPILFLGTGQGYDDLQKFDPEAMVE 394
Query: 586 TLL 588
LL
Sbjct: 395 DLL 397
>gi|448597771|ref|ZP_21654696.1| cell division protein FtsY [Haloferax alexandrinus JCM 10717]
gi|445739232|gb|ELZ90741.1| cell division protein FtsY [Haloferax alexandrinus JCM 10717]
Length = 476
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 274 EADKPVTLIFTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 333
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 334 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 393
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 394 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 442
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 443 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 472
>gi|292654298|ref|YP_003534195.1| signal recognition particle receptor SRalpha [Haloferax volcanii
DS2]
gi|448293842|ref|ZP_21483945.1| cell division protein FtsY [Haloferax volcanii DS2]
gi|385178685|sp|D4GYW6.1|FTSY_HALVD RecName: Full=Signal recognition particle receptor FtsY; Short=SRP
receptor
gi|33518607|gb|AAO73354.1| signal recognition particle receptor-like protein [Haloferax
volcanii]
gi|291372798|gb|ADE05025.1| signal recognition particle receptor SRalpha [Haloferax volcanii
DS2]
gi|445569763|gb|ELY24334.1| cell division protein FtsY [Haloferax volcanii DS2]
Length = 456
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 254 EADKPVTLIFTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 313
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 314 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 373
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 374 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 422
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 423 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 452
>gi|448573623|ref|ZP_21641106.1| cell division protein FtsY [Haloferax lucentense DSM 14919]
gi|445718529|gb|ELZ70219.1| cell division protein FtsY [Haloferax lucentense DSM 14919]
Length = 458
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 256 EADKPVTLIFTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 315
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 316 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 375
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 376 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 424
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 425 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 454
>gi|325968430|ref|YP_004244622.1| signal recognition particle-docking protein FtsY [Vulcanisaeta
moutnovskia 768-28]
gi|323707633|gb|ADY01120.1| signal recognition particle-docking protein FtsY [Vulcanisaeta
moutnovskia 768-28]
Length = 305
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 368 IDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAV 427
+D + +V + +KP V++F+G NG GK+T +AK+ Y L++ + + AA DT+R+GA+
Sbjct: 95 VDFMGEVTRILQNKKPVVLLFLGPNGYGKTTTIAKITYQLMRRGYTAVWAAADTYRAGAI 154
Query: 428 EQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRAL 487
EQL HA +L V + + Y DPA VA +AI A D V++DTAGRM + LM L
Sbjct: 155 EQLEGHATKLGVRVIKHSYGSDPAAVAYDAISHAKVRSIDYVMIDTAGRMHTDINLMNEL 214
Query: 488 SKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDD 547
SK+ ++ PDL +F+ +AL+GN+A+D ++K+ K IDG+++TK D
Sbjct: 215 SKIQRVSRPDLSIFIADALLGNEALD-IAKYYSKYVR---------IDGLIVTKVDAY-P 263
Query: 548 KVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
K GA L+ +Y P+ F+G GQ Y DL+ N + L+
Sbjct: 264 KGGAILTFLYELKKPIYFLGVGQGYDDLRPFNKMEFFRQLI 304
>gi|448544117|ref|ZP_21625430.1| cell division protein FtsY [Haloferax sp. ATCC BAA-646]
gi|448551129|ref|ZP_21629271.1| cell division protein FtsY [Haloferax sp. ATCC BAA-645]
gi|448558378|ref|ZP_21633052.1| cell division protein FtsY [Haloferax sp. ATCC BAA-644]
gi|445705621|gb|ELZ57514.1| cell division protein FtsY [Haloferax sp. ATCC BAA-646]
gi|445710685|gb|ELZ62483.1| cell division protein FtsY [Haloferax sp. ATCC BAA-645]
gi|445713266|gb|ELZ65045.1| cell division protein FtsY [Haloferax sp. ATCC BAA-644]
Length = 463
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 261 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 320
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 321 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 380
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 381 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 429
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 430 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 459
>gi|448560511|ref|ZP_21633959.1| cell division protein FtsY [Haloferax prahovense DSM 18310]
gi|445722161|gb|ELZ73824.1| cell division protein FtsY [Haloferax prahovense DSM 18310]
Length = 450
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 248 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 307
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 308 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 367
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 368 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 416
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 417 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 446
>gi|322368143|ref|ZP_08042712.1| signal recognition particle-docking protein FtsY [Haladaptatus
paucihalophilus DX253]
gi|320552159|gb|EFW93804.1| signal recognition particle-docking protein FtsY [Haladaptatus
paucihalophilus DX253]
Length = 372
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 130/210 (61%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP V++F GVNGVGK+T++AK++ + + S +MA DT+R+GA +Q+R HA L
Sbjct: 167 EADKPLVIIFTGVNGVGKTTSIAKLSRYFEERGYSSVMANGDTYRAGANQQIREHADALD 226
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V +A++ A + D+VL DTAGR+ +E LM L K+ + +PD+
Sbjct: 227 TKLIAHEQGGDPAAVIYDAVEYADAHDIDIVLGDTAGRLHTSEGLMDQLEKIGRVVDPDM 286
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+FV EA+ G DAV + +F++ IDG +LTK D D K GAA+S+ +V
Sbjct: 287 TIFVDEAVAGQDAVQRAKEFDEAAE----------IDGSILTKADA-DSKGGAAISISHV 335
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y D+++ + + +V+ LL
Sbjct: 336 TGKPILFLGTGQGYDDIEQFDPERMVERLL 365
>gi|448611254|ref|ZP_21661888.1| cell division protein FtsY [Haloferax mucosum ATCC BAA-1512]
gi|445743686|gb|ELZ95167.1| cell division protein FtsY [Haloferax mucosum ATCC BAA-1512]
Length = 463
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 126/210 (60%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 261 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHADALD 320
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V +A++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 321 KKLIAHEQGGDPAAVIYDAVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 380
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+FV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 381 TIFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 429
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y +++ + +++V+ LL
Sbjct: 430 TGKPILFLGVGQGYDHIERFDPEAMVERLL 459
>gi|389845621|ref|YP_006347860.1| signal recognition particle receptor SRalpha [Haloferax
mediterranei ATCC 33500]
gi|448616762|ref|ZP_21665472.1| cell division protein FtsY [Haloferax mediterranei ATCC 33500]
gi|388242927|gb|AFK17873.1| signal recognition particle receptor SRalpha [Haloferax
mediterranei ATCC 33500]
gi|445751417|gb|EMA02854.1| cell division protein FtsY [Haloferax mediterranei ATCC 33500]
Length = 464
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 262 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHADALD 321
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V +A++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 322 KKLISHEQGGDPAAVIYDAVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 381
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
+FV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 382 TIFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 430
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y +++ + +++V LL
Sbjct: 431 TGKPILFLGVGQGYDHIERFDPEAMVDRLL 460
>gi|433434648|ref|ZP_20408027.1| cell division protein FtsY, partial [Haloferax sp. BAB2207]
gi|432192668|gb|ELK49506.1| cell division protein FtsY, partial [Haloferax sp. BAB2207]
Length = 383
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 181 EADKPVTLIFTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 240
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 241 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 300
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 301 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 349
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 350 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 379
>gi|346430388|emb|CCC55644.1| signal recognition particle-docking protein FtsY [uncultured
archaeon]
Length = 245
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 126/210 (60%), Gaps = 11/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+R+PYV+VF+GVNG GK+T +AKVAY L + ++AA DTFR+GA+EQL HA+R+ V
Sbjct: 45 RRRPYVMVFLGVNGGGKTTTIAKVAYALKGRGLRPLLAAADTFRAGAIEQLSLHAQRIGV 104
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
+ +GY DPA VA++A++ A D VL+DTAGRM LM L K++ +
Sbjct: 105 EVVSQGYGADPAAVARDAVERAESRRFDAVLIDTAGRMYTRSRLMDELRKIVEVAGAHER 164
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
+ + +AL GNDAV Q +F +++ +D +++TK D D + G L++ Y
Sbjct: 165 VMIVDALTGNDAVAQAREFEREVG----------VDSVVVTKADA-DVRGGVVLTLAYEI 213
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P+ ++G GQ Y DL + I +LL+
Sbjct: 214 RKPIRYLGVGQGYGDLVPFRAEEIADSLLR 243
>gi|171186108|ref|YP_001795027.1| signal recognition particle-docking protein FtsY [Pyrobaculum
neutrophilum V24Sta]
gi|170935320|gb|ACB40581.1| signal recognition particle-docking protein FtsY [Pyrobaculum
neutrophilum V24Sta]
Length = 305
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +AL+ +L +D + A E+ +PYVV+F+G NG GK+T LAK+A+ L +
Sbjct: 80 AVHDALLGVLGDVPDVDFYEEARRALERSRPYVVMFLGPNGYGKTTTLAKLAFNLQEMGF 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V+ AA DTFR+GA EQL H RR+ + Y DPA VA +A+Q A G VL+D
Sbjct: 140 RVVAAAADTFRAGAREQLEEHGRRVGFRVVGGPYGSDPAAVAYDAVQHARSRGYHFVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + P L +FV +A +GN+A+ +++++ K
Sbjct: 200 TAGRMHTDANLMEELRKIQRVAEPHLSIFVFDAQLGNEAL-EIARYYSKYVR-------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ TK D K G+ L+ +YV PV F+G GQ+Y DL K + V LL
Sbjct: 251 -IDGMIATKVDAY-PKGGSILTFMYVLKRPVYFLGVGQTYRDLVKFSKSEYVGRLL 304
>gi|448582788|ref|ZP_21646292.1| cell division protein FtsY [Haloferax gibbonsii ATCC 33959]
gi|445732436|gb|ELZ84019.1| cell division protein FtsY [Haloferax gibbonsii ATCC 33959]
Length = 451
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 249 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHAEALG 308
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 309 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 368
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 369 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 417
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 418 TGKPILFLGVGQGYDHIEKFDPERMVERLL 447
>gi|448607293|ref|ZP_21659438.1| cell division protein FtsY [Haloferax sulfurifontis ATCC BAA-897]
gi|445738305|gb|ELZ89830.1| cell division protein FtsY [Haloferax sulfurifontis ATCC BAA-897]
Length = 452
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 123/210 (58%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 250 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHAEALG 309
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 310 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 369
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 370 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 418
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V LL
Sbjct: 419 TGKPILFLGVGQGYDHIEKFDPEQMVNRLL 448
>gi|242219969|ref|XP_002475757.1| predicted protein [Postia placenta Mad-698-R]
gi|220725029|gb|EED79036.1| predicted protein [Postia placenta Mad-698-R]
Length = 116
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 97/114 (85%), Gaps = 2/114 (1%)
Query: 477 MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN--PQLI 534
MQDNEPLMRAL+KL+ +N PD ++FVGEALVGN+AVDQL+KF++ L D S+S + I
Sbjct: 1 MQDNEPLMRALAKLVAVNTPDKIIFVGEALVGNEAVDQLTKFDRALRDFSASSGGKERGI 60
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DG+L+TK+DT+DDKVGAALSM YV+G P++FVGCGQ+YTDL++L V ++V+ +L
Sbjct: 61 DGMLVTKWDTVDDKVGAALSMTYVTGQPIIFVGCGQTYTDLRQLRVANVVQAIL 114
>gi|345006192|ref|YP_004809045.1| signal recognition particle-docking protein FtsY [halophilic
archaeon DL31]
gi|344321818|gb|AEN06672.1| signal recognition particle-docking protein FtsY [halophilic
archaeon DL31]
Length = 368
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP VVF GVNGVGK+T++AK++ WL S ++A DT+R+GA EQ++ HA +
Sbjct: 166 EADKPVTVVFTGVNGVGKTTSIAKMSEWLGDRDYSSVLANGDTYRAGANEQIQKHAENVG 225
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A N DVVL DTAGR+ N LM L K+ + +P++
Sbjct: 226 RKLISHEQGGDPAAVIYDGVEYAEANDIDVVLGDTAGRLHTNNDLMTQLEKIHRVVDPEM 285
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V
Sbjct: 286 TLFVDEAVAGQDAVERAREFNKAAE----------IDGTVLTKADA-DSSGGAAISIAHV 334
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G PV+F+G GQ Y D++ + + +V LL
Sbjct: 335 TGKPVLFLGTGQGYDDIQAFDPEELVGQLL 364
>gi|448622349|ref|ZP_21669043.1| cell division protein FtsY [Haloferax denitrificans ATCC 35960]
gi|445754431|gb|EMA05836.1| cell division protein FtsY [Haloferax denitrificans ATCC 35960]
Length = 451
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 123/210 (58%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 249 EADKPVTLIFTGINGVGKTTTIAKLARYFEKQGYSTVLANGDTYRAGANEQIREHAEALG 308
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 309 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 368
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 369 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 417
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V LL
Sbjct: 418 TGKPILFLGVGQGYDHIEKFDPEQMVNRLL 447
>gi|452077693|gb|AGF93642.1| signal recognition particle-docking protein FtsY [uncultured
organism]
Length = 360
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 139/236 (58%), Gaps = 15/236 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +AL+ +++ + D + AA+ KP +VF GVNGVGK+T +AK+A +L
Sbjct: 139 ALRDALLDVISVGQ-FDFEERIAAAE---KPVTIVFTGVNGVGKTTTIAKLARYLEARGY 194
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
S ++A DT+R+GA EQ+R HA L + DPA V + ++ A N DVVL D
Sbjct: 195 SSVLANGDTYRAGANEQIREHAEALGKRLIAHEQGGDPAAVIYDGVEYAEANDVDVVLGD 254
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ + LM L K+ + +PDL +FV EA+ G DAV++ +F+ +
Sbjct: 255 TAGRLHTSSDLMAQLEKIDRVVDPDLTVFVDEAVAGQDAVERAKQFD----------DAA 304
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +LTK D D + GAA+S+ YV+G PV+F+G GQ Y DL + + + +V L+
Sbjct: 305 EIDGAVLTKADA-DSQGGAAISVAYVTGKPVLFLGTGQGYGDLDRFDPEELVDDLV 359
>gi|124486291|ref|YP_001030907.1| signal recognition particle-docking protein FtsY
[Methanocorpusculum labreanum Z]
gi|124363832|gb|ABN07640.1| signal recognition particle-docking protein FtsY
[Methanocorpusculum labreanum Z]
Length = 337
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 127/215 (59%), Gaps = 11/215 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
V + +P ++F GVNG GK+T++AK+A++L +SV++ A DTFR+GA+EQ+R H
Sbjct: 131 VSYVRTHDRPVKILFTGVNGTGKTTSVAKIAHYLQSQGLSVVVGAGDTFRAGAIEQIRVH 190
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
RL + + DP+ V + ++ A + +DVVL D+AGR + LM L K+ +
Sbjct: 191 CDRLGIKLIAHQEGADPSAVLYDTVEYAKAHKTDVVLADSAGRFHNRVNLMNQLEKIKRV 250
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
PDLV +V EA+ GNDAV + +F + ++ DG++LTK D +D K GAA+
Sbjct: 251 MKPDLVFYVDEAVAGNDAVIRAEEFEKTVS----------TDGVILTKVD-MDPKGGAAI 299
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ Y G P++F+G GQ Y D+K I+ +
Sbjct: 300 SIAYTIGKPLVFLGVGQGYDDMKPFTPSLIIDEIF 334
>gi|408382436|ref|ZP_11179980.1| signal recognition particle-docking protein FtsY [Methanobacterium
formicicum DSM 3637]
gi|407814791|gb|EKF85414.1| signal recognition particle-docking protein FtsY [Methanobacterium
formicicum DSM 3637]
Length = 480
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 207/411 (50%), Gaps = 49/411 (11%)
Query: 216 KLQKLRNKGGK-----KTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNG 270
K QK+++K K ++D KG + + K + + R D +SK D +G
Sbjct: 79 KDQKVKDKADKTSGKDESDEKSPKGEDGEKKSRFSFFRRKSDSKDEDSKKTSEDEISKDG 138
Query: 271 SNIEVEAADHGESM-----MDKEEVFSSDSESEEDEEV--GKHNKPDAKKTGWFSSMFQS 323
N +++ AD + + ++DSE D E GK K + + +G F+
Sbjct: 139 INSKLKTADSSTATDVSGSTTDSVIGATDSEKSTDSEKDKGKSGKEEDEPSGLFTFATHK 198
Query: 324 IAGKANLDKAD----------------LEPALKALKDRLMTKNVAA-------MEEALVR 360
+ ++D E +K++K+ L+ + + EAL +
Sbjct: 199 TISEKDVDDVLFELELALLEGDVAMEVAEQIVKSVKEDLVGRKIKRRSDVAKFTREALKK 258
Query: 361 ILTPRRSID---ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
++ +D + V AK+ +P ++FVGVNG GK+T ++K+A ++ S ++A
Sbjct: 259 AISDILVVDGPNLEELVQNAKKTGEPLKIMFVGVNGTGKTTTISKIADHYVKEGYSPVIA 318
Query: 418 ACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
A DTFR+GA+EQ+ HA ++ V I DPA VA +A++ A ++VL+DTAGRM
Sbjct: 319 ASDTFRAGAIEQISHHAEKVGVKIIRHQKGADPAAVAYDAVEHAKAKKKELVLIDTAGRM 378
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
Q N LM + K+ + PDL +FVG+AL GNDAV+Q KF+ + +DGI
Sbjct: 379 QTNINLMDEMKKIQRVVKPDLAIFVGDALTGNDAVEQARKFDDAVG----------VDGI 428
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+LTK D K GAALS+ +V P++F+G GQ Y D+ + + +V+ +L
Sbjct: 429 ILTKA-DADAKGGAALSIGHVINKPILFLGVGQGYGDIMEFHPDWMVEQVL 478
>gi|307353992|ref|YP_003895043.1| signal recognition particle-docking protein FtsY [Methanoplanus
petrolearius DSM 11571]
gi|307157225|gb|ADN36605.1| signal recognition particle-docking protein FtsY [Methanoplanus
petrolearius DSM 11571]
Length = 361
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 137/237 (57%), Gaps = 16/237 (6%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+++AL+ +L + D H KP V+F GVNG GK+T +AKVA++L
Sbjct: 139 ALKDALLEVLGEGFLLTDYIDSH-----EKPVKVLFTGVNGAGKTTTIAKVAFYLKSKGY 193
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SV++ + DTFR+GA +Q++THA R+ V + DP+ V + + A + DVVL D
Sbjct: 194 SVVIGSGDTFRAGANQQMKTHADRIGVKVISHQEGADPSAVLFDTVNYAKAHNIDVVLAD 253
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR + LM+ L K+ + NPD+V +V EA+ GNDAV + +FN +
Sbjct: 254 TAGRFHNKGNLMKQLEKIRRVMNPDIVAYVDEAVAGNDAVIRAEEFNSAVG--------- 304
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
D ++LTK D +D K GAA+S+ + G P+MF+G GQ Y D+ + +V+ LL+
Sbjct: 305 -TDVVVLTKAD-MDTKGGAAISIAHTIGKPLMFLGMGQGYDDIVPFEPEKMVEELLE 359
>gi|154151418|ref|YP_001405036.1| signal recognition particle-docking protein FtsY [Methanoregula
boonei 6A8]
gi|153999970|gb|ABS56393.1| signal recognition particle-docking protein FtsY [Methanoregula
boonei 6A8]
Length = 344
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
+ +P ++F GVNG GK+T +AK+ +L + SV++ A DTFR+GA+EQ+ HA RL
Sbjct: 141 RSHERPVKILFTGVNGTGKTTTVAKIGAYLKKEGFSVVIGAGDTFRAGAIEQIGVHAERL 200
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+ + E DP+ V + +Q A + +DVVL DTAGR LM L K+ + PD
Sbjct: 201 GIKVIEHQTGADPSAVLFDTVQYAIAHKTDVVLADTAGRFHTKANLMSQLEKIRRVMKPD 260
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L+++V EA+ GNDAV + ++F++ + D I+LTK D +D + GAA+S+ +
Sbjct: 261 LIVYVDEAVAGNDAVVRAAEFDKTVG----------ADAIVLTKAD-MDSRGGAAISIAH 309
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P++F+G GQ+Y D+ ++V+ LL
Sbjct: 310 TIGKPLLFLGTGQAYEDIMPFEPGAVVEELL 340
>gi|16903158|gb|AAL30433.1|AF439264_1 FtsY NG domain [Haloferax volcanii]
Length = 266
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E KP ++F G+NGVGK+T +AK+A + + S ++A DT+R+GA EQ+R HA L
Sbjct: 64 EADKPVTLIFTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIREHAEALD 123
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+ DPA V + ++ A + D+VL DTAGR+ + LM L K+ + PDL
Sbjct: 124 KKLIAHEQGGDPAAVIYDGVEYAEAHDIDIVLGDTAGRLHTSNDLMAQLEKIDRVVGPDL 183
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV EA+ G DAV++ +FN A IDG +LTK D D GAA+S+ YV
Sbjct: 184 TLFVDEAVAGQDAVERARQFNDAAA----------IDGAILTKADA-DSNGGAAISIAYV 232
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P++F+G GQ Y ++K + + +V+ LL
Sbjct: 233 TGKPILFLGVGQGYDHIEKFDPEQMVERLL 262
>gi|219851207|ref|YP_002465639.1| signal recognition particle-docking protein FtsY [Methanosphaerula
palustris E1-9c]
gi|219545466|gb|ACL15916.1| signal recognition particle-docking protein FtsY [Methanosphaerula
palustris E1-9c]
Length = 409
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 125/207 (60%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
+P ++F GVNG GK+T +AKV +LL++ SV++ A DTFR+GA+EQ+ HA RL + +
Sbjct: 210 RPVKILFTGVNGTGKTTTVAKVGAFLLKNGFSVVIGAGDTFRAGAIEQIDIHAERLGIKV 269
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+ DP+ V + +Q A + DVVL DTAGR + LM L+K+ + PDLV++
Sbjct: 270 IQHQQGGDPSAVLFDTVQYAISHQIDVVLADTAGRFHNRANLMNQLAKVKRVMKPDLVVY 329
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ GNDAV + +F + + D ++LTK D +D K GAA+S+ + G
Sbjct: 330 VDEAVAGNDAVIRAEEFEKTVG----------ADAVVLTKAD-MDPKGGAAISIAHTIGK 378
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+MF+G GQ Y DL ++V LL
Sbjct: 379 PLMFLGVGQGYEDLIPFTPATVVDDLL 405
>gi|410722071|ref|ZP_11361386.1| signal recognition particle-docking protein FtsY [Methanobacterium
sp. Maddingley MBC34]
gi|410597877|gb|EKQ52484.1| signal recognition particle-docking protein FtsY [Methanobacterium
sp. Maddingley MBC34]
Length = 467
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 132/215 (61%), Gaps = 11/215 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
V AK+ +P V+FVGVNG GK+T ++K+A ++ + ++AA DTFR+GA+EQ+ H
Sbjct: 262 VQQAKKTGEPLKVMFVGVNGTGKTTTISKIADHYVKEGYTPVIAASDTFRAGAIEQISYH 321
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
A ++ V I DPA VA +A++ A ++VL+DTAGRMQ N LM + K+ +
Sbjct: 322 AEKVGVKIIRHQKGADPAAVAYDAVEHARAKNKELVLIDTAGRMQTNINLMDEMKKIQRV 381
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
PDL +FVG+AL GNDAV+Q KF+ + +DGI+LTK D K GAAL
Sbjct: 382 VKPDLAIFVGDALTGNDAVEQARKFDDAVG----------VDGIILTKA-DADAKGGAAL 430
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ +V P++F+G GQ Y D+ + +V+ +L
Sbjct: 431 SIGHVINKPILFLGVGQGYGDIMEFRPDWMVEQVL 465
>gi|409721157|ref|ZP_11269371.1| cell division protein FtsY [Halococcus hamelinensis 100A6]
gi|448722166|ref|ZP_21704705.1| cell division protein FtsY [Halococcus hamelinensis 100A6]
gi|445790157|gb|EMA40827.1| cell division protein FtsY [Halococcus hamelinensis 100A6]
Length = 476
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 132/235 (56%), Gaps = 11/235 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+EEAL L S+ E KP +VF GVNGVGK+T++AK+A + + +S
Sbjct: 249 VEEALAESLREVISVGQFDFDQRIAEADKPVTIVFTGVNGVGKTTSIAKLARYFEERGLS 308
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++A DT+R+GA +QL HA L + DPA V +A++ A N DVVL DT
Sbjct: 309 TVLANGDTYRAGANQQLAEHAENLGKKVIAHDQGSDPAAVLYDAVEYAEANDIDVVLGDT 368
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ + LM L K+ + +PD+ +FV EA+ G DA ++ +F+ +
Sbjct: 369 AGRLHTSNDLMAQLEKIDRVVDPDMTIFVDEAVAGQDATNRAREFD----------DAAT 418
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +L K D D + GAA+S+ +V+G P++F+G GQ Y D+++ +V LL
Sbjct: 419 IDGTILAKADA-DSQGGAAISIAHVTGKPILFLGTGQGYDDIERFEPDVLVDRLL 472
>gi|432330520|ref|YP_007248663.1| signal recognition particle-docking protein FtsY [Methanoregula
formicicum SMSP]
gi|432137229|gb|AGB02156.1| signal recognition particle-docking protein FtsY [Methanoregula
formicicum SMSP]
Length = 360
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 130/215 (60%), Gaps = 12/215 (5%)
Query: 375 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
+ AK +R P ++F GVNG GK+T +AK+ WL + +V++ A DT+R+GA+EQ+ HA
Sbjct: 155 YIAKHER-PVKILFTGVNGTGKTTTVAKIGSWLRKEGFTVVIGAGDTYRAGAIEQIAVHA 213
Query: 435 RRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
RL + + + DP+ V + ++ A + DVVL DTAGR + LM L K+ +
Sbjct: 214 ERLGIRVIQHQEGADPSAVLFDTVEYAKAHKIDVVLADTAGRFHNKANLMSQLEKIKRVM 273
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
PDLV++V EA+ GNDAV + +F++ + D ++LTK D +D + GAA+S
Sbjct: 274 KPDLVVYVDEAVAGNDAVTRAFEFDRTVG----------ADAVVLTKAD-MDSRGGAAIS 322
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ + G P+MF+G GQ+Y D+ ++V+ LL+
Sbjct: 323 IAHTIGKPLMFLGVGQAYDDIMPFEPATVVEELLE 357
>gi|147920512|ref|YP_685694.1| putative signal recognition particle [Methanocella arvoryzae MRE50]
gi|110621090|emb|CAJ36368.1| putative signal recognition particle [Methanocella arvoryzae MRE50]
Length = 377
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 11/212 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
++ +P V+ F+GVNG GK+T +AK+ L + V++AA DTFR+GA+EQL HA RL
Sbjct: 176 RKSNRPVVITFIGVNGAGKTTTIAKLGERLKEQGYGVVIAAGDTFRAGAIEQLEKHADRL 235
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
+ + + DPA V +A+Q A N D+VL DTAGR+ N LM L K+ + PD
Sbjct: 236 GIKMIKHAQGADPAAVIYDAVQFAKNNKKDIVLADTAGRLHTNINLMEQLRKINRVVKPD 295
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
LV+FV EA+ GNDAV++ FN + + G +LTK D K GAA+S+ +
Sbjct: 296 LVIFVDEAIAGNDAVERAKLFNDAVP----------VSGTILTK-ADADAKGGAAISIAH 344
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
++G P++F+G GQ Y DLKK V L +
Sbjct: 345 ITGKPILFLGVGQEYKDLKKFETDWFVDRLFE 376
>gi|355571040|ref|ZP_09042310.1| signal recognition particle-docking protein FtsY [Methanolinea
tarda NOBI-1]
gi|354826322|gb|EHF10538.1| signal recognition particle-docking protein FtsY [Methanolinea
tarda NOBI-1]
Length = 344
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 136/237 (57%), Gaps = 16/237 (6%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
AA+ AL+ +L D V + +P ++F GVNG GK+T +AKVA +L +
Sbjct: 120 AALRNALMSVLG-----DGFDLVSYIRNHERPVRILFTGVNGTGKTTTVAKVAAYLKKQG 174
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
SV++ A DTFR+GA+EQ+ HA RL + + + DP+ V +A+ A + D VL
Sbjct: 175 FSVVIGAGDTFRAGALEQIDVHADRLGIKVIQHQQGADPSAVLFDAVSYAKAHRIDAVLA 234
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR + LM L K+ + NPDL+++V EA+ GNDAV + +F++ +
Sbjct: 235 DTAGRFHNRANLMNQLEKIRRVMNPDLIVYVDEAVAGNDAVIRAHEFDRTVG-------- 286
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
D ++LTK D +D + GAA+S+ + G PVMF+G GQ Y D+ + +V+ LL
Sbjct: 287 --ADAVILTKAD-MDSRGGAAISIAHTIGKPVMFLGTGQGYDDIVPFSPARVVEELL 340
>gi|405960201|gb|EKC26142.1| Signal recognition particle receptor subunit alpha [Crassostrea
gigas]
Length = 108
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 87/100 (87%)
Query: 490 LIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
LI +N PDLVLFVGEALVGN+AVDQL+KFN+ LAD S+ NP+LIDGI+LTKFDTIDDKV
Sbjct: 8 LIKVNQPDLVLFVGEALVGNEAVDQLTKFNEALADHSNMTNPRLIDGIILTKFDTIDDKV 67
Query: 550 GAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
GAA+SM Y++G P++FVG GQ+YTDL+ LN K++V LLK
Sbjct: 68 GAAISMTYITGQPIVFVGTGQTYTDLRNLNAKAVVNALLK 107
>gi|448725558|ref|ZP_21708013.1| cell division protein FtsY [Halococcus morrhuae DSM 1307]
gi|445798405|gb|EMA48820.1| cell division protein FtsY [Halococcus morrhuae DSM 1307]
Length = 489
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 131/235 (55%), Gaps = 11/235 (4%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
+EEAL L S+ E KP +VF GVNGVGK+T +AK+A + + +S
Sbjct: 262 VEEALAEALREVISVGQFDFEQRITEANKPVTIVFTGVNGVGKTTTIAKLARYFEERGLS 321
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++A DT+R+GA +QL HA L DPA V +A++ A + DVVL DT
Sbjct: 322 TVLANGDTYRAGANQQLGEHADNLDKEYIAHEQGSDPAAVLYDAVEYAEAHDIDVVLGDT 381
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ + LM L K+ + +PD+ LFV EA+ G DA ++ S+F+ +
Sbjct: 382 AGRLHTSNDLMAQLEKIDRVVDPDMTLFVDEAVAGQDATNRASEFD----------DAAT 431
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG +L K D D + GAA+S+ +V+G P++F+G GQ Y DL++ +V LL
Sbjct: 432 IDGAILAKADA-DSQGGAAISIAHVTGKPILFLGTGQGYDDLERFEPDVLVDRLL 485
>gi|440491416|gb|ELQ74062.1| Signal recognition particle receptor, alpha subunit
[Trachipleistophora hominis]
Length = 387
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 154/261 (59%), Gaps = 33/261 (12%)
Query: 340 KALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRK--------PYVVVFVGV 391
+AL L+ KNVA E +L SID +RD + + K PY V VG
Sbjct: 146 EALLAHLLNKNVAP--EVAGDVLMYAESIDDVRDAMRSIIKTKRLGQDACAPYRVALVGT 203
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----QVPIFEKGYE 447
NGVGK+T L+K+ Y V +AACDTFR+GA+EQL+T+ RL +V I ++GY
Sbjct: 204 NGVGKTTTLSKLCYHFAVRDKGVYVAACDTFRAGAIEQLQTYVNRLKINHRVEIHQQGYN 263
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
K+ VA+ A+Q DV+LVDTAGR+ + +PL+ +L KL L D V++V EAL
Sbjct: 264 KEEWKVARSALQYG--KAYDVILVDTAGRV-NKKPLIDSLRKLTNLGFDD-VVYVSEALK 319
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
G + D L+ F+ ++ I++TK DT+DD++G+ L++ Y S PV+F+G
Sbjct: 320 GYEK-DVLA-FD-------------MVTAIIVTKIDTVDDRIGSILNLCYFSKKPVVFLG 364
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
GQS DL++++V+ +++TLL
Sbjct: 365 HGQSNVDLEEVDVEKVIETLL 385
>gi|448738042|ref|ZP_21720073.1| cell division protein FtsY [Halococcus thailandensis JCM 13552]
gi|445802626|gb|EMA52930.1| cell division protein FtsY [Halococcus thailandensis JCM 13552]
Length = 482
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 125/215 (58%), Gaps = 16/215 (7%)
Query: 379 EQR-----KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 433
EQR KP +VF GVNGVGK+T +AK+A + + +S ++A DT+R+GA +QL H
Sbjct: 275 EQRIVAADKPVTIVFTGVNGVGKTTTIAKLARYFEERGLSTVLANGDTYRAGANQQLGEH 334
Query: 434 ARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL 493
A L DPA V +A++ A + DVVL DTAGR+ + LM L K+ +
Sbjct: 335 AENLDKEYITHEQGSDPAAVLYDAVEYAEAHDIDVVLGDTAGRLHTSNDLMAQLEKIDRV 394
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
+PD+ LFV EA+ G DA ++ S+F+ + IDG +L K D D + GAA+
Sbjct: 395 VDPDMTLFVDEAVAGQDATNRASEFD----------DAATIDGAILAKADA-DSQGGAAI 443
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ +V+G P++F+G GQ Y DL + + +V LL
Sbjct: 444 SIAHVTGKPILFLGTGQGYDDLARFDPDVLVDRLL 478
>gi|255513535|gb|EET89801.1| signal recognition particle-docking protein FtsY [Candidatus
Micrarchaeum acidiphilum ARMAN-2]
Length = 370
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 137/234 (58%), Gaps = 13/234 (5%)
Query: 357 ALVRILTPRRS-IDILRDV-HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSV 414
AL+ +L S ID+ V A+E P ++F+G NG GK+T +AKVAY L + +
Sbjct: 146 ALLEVLKINNSGIDVFDYVLKRAEEGSIPVKILFLGPNGTGKTTTIAKVAYKLKKMNIPT 205
Query: 415 MMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTA 474
+++A DTFR+ A+EQ HA+ + + + GY DPA VA +AI A +G VL+DTA
Sbjct: 206 VISASDTFRAAAIEQTEYHAKAVGAEVIKSGYGADPASVAFDAINYARSHGMPAVLIDTA 265
Query: 475 GRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLI 534
GR + N+ L+ + K++ + PD+ LFVGE+ G+ +Q+ + ++ + I
Sbjct: 266 GRQETNKNLLSEMQKIVRVVQPDITLFVGESTAGSIIAEQIKELSKAIK----------I 315
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
DGI+LTK D D K G+ +S+ +G PV+ +G G+SY L K + I+ +LL
Sbjct: 316 DGIILTKIDC-DAKGGSVISIADTTGIPVLLLGSGESYEALSKYSNDFIIDSLL 368
>gi|159041443|ref|YP_001540695.1| signal recognition particle-docking protein FtsY [Caldivirga
maquilingensis IC-167]
gi|157920278|gb|ABW01705.1| signal recognition particle-docking protein FtsY [Caldivirga
maquilingensis IC-167]
Length = 302
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 140/238 (58%), Gaps = 13/238 (5%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
A + + L+ +L+ +D + K ++P V++F+G NG GK+T +AK+ LL+
Sbjct: 78 ALVRDTLMNLLSSIPDVDFDEFIKGVK--KRPIVLLFLGPNGYGKTTTIAKLTNMLLKRG 135
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+SV+ AA DT+R+GAVEQL HA +L V + + Y DPA VA +AI+ A G VV++
Sbjct: 136 MSVVWAAADTYRAGAVEQLEGHAAKLGVRVIKHPYGSDPASVAYDAIEHAKARGISVVMI 195
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGRM + LM L K+ +++PD +F+ +AL+GNDAVD +++ +
Sbjct: 196 DTAGRMHTDRNLMEELRKVHRVSSPDASIFIVDALMGNDAVDVARTYSKYIP-------- 247
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
ID +++TK D K G L+++Y P++F+G GQ Y DL K N + LL+
Sbjct: 248 --IDFVVVTKVDAY-VKGGVILTLLYELKKPIIFLGTGQGYDDLIKFNKLDFINKLLE 302
>gi|448337324|ref|ZP_21526403.1| cell division protein FtsY, partial [Natrinema pallidum DSM 3751]
gi|445625871|gb|ELY79224.1| cell division protein FtsY, partial [Natrinema pallidum DSM 3751]
Length = 496
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 116/191 (60%), Gaps = 11/191 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP ++F GVNGVGK+T++AK++ + + S +MA DT+R+GA EQ++ HA L
Sbjct: 317 KPITIIFTGVNGVGKTTSIAKLSRYFEERGYSSVMANGDTYRAGANEQIQEHADALDTKC 376
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
DPA V +A++ A N DVVL DTAGR+ +E LM L K+ + +PD+ LF
Sbjct: 377 ISHEQGGDPAAVLYDAVEYAEANDIDVVLGDTAGRLHTDEGLMDQLEKIGRVVDPDMTLF 436
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V EA+ G DAV++ +FN+ IDG +LTK D D GAA+S+ +V+G
Sbjct: 437 VDEAVAGQDAVNRAREFNEAAE----------IDGAILTKADA-DSNGGAAISIAHVTGK 485
Query: 562 PVMFVGCGQSY 572
P++F+G GQ Y
Sbjct: 486 PILFLGVGQGY 496
>gi|424814344|ref|ZP_18239522.1| signal recognition particle GTPase [Candidatus Nanosalina sp.
J07AB43]
gi|339757960|gb|EGQ43217.1| signal recognition particle GTPase [Candidatus Nanosalina sp.
J07AB43]
Length = 294
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 42/298 (14%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA---------AMEEALVRILTPRRS 367
FSS +S + LD+ D+EP L+ + +L+ NV+ M++ LV R +
Sbjct: 12 FSSSVKSAVTEKQLDEEDVEPILEDFRLKLLKNNVSLEVAQEIEEEMKQKLVGEEVGRNN 71
Query: 368 ID--------------ILRDVHAAKE---QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
++ + D + K +P V +G NG GK+T AK+A L +H
Sbjct: 72 VEDRVEEAFRNKIGELVDDDFNLEKSIEGSDEPATVFLIGFNGSGKTTTAAKLADKL-KH 130
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ V++ A DTFR+ ++EQL+ H L V + YE DPA V + ++ A +NG V +
Sbjct: 131 R-GVVLGAGDTFRAASIEQLQEHGENLDVKVVAHEYESDPAAVGYDTVEHAEKNGK-VAI 188
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
VDTAGR ++ LM L K++ +N+PD+ V +AL GND ++Q +
Sbjct: 189 VDTAGRSHSDDNLMNELEKMVDVNDPDVSFLVVDALAGNDVLEQADAY------------ 236
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ D +++TK D +D+K GA LS+ + SG P+ F+G GQ Y DL++ + + +L
Sbjct: 237 EGMFDAVIVTKMD-VDEKGGAVLSLSHRSGKPIAFLGTGQDYADLEEFDTEKFADRIL 293
>gi|410584603|ref|ZP_11321705.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
gi|410504189|gb|EKP93701.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter subterraneus DSM 13965]
Length = 445
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 157/297 (52%), Gaps = 36/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
++F+ + GK L +AD+E AL+ ++ L+ +V A+ + ++ L
Sbjct: 10 LQAVFKRLRGKGKLTEADVEAALREVRLALLEADVNFKVVKDFIARVRERAVGQEVLESL 69
Query: 363 TPRRSI-----DILRDVHAAKEQRK------PYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP + + D L + + R P VV+ VG+ G GK+T AK+A L +
Sbjct: 70 TPAQQVIKIVHDELTQLMGGQHARLDLGGELPAVVMLVGLQGSGKTTTAAKLARLLTRQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R AVEQL T +++QVP++ G ++DP +A+E + EA R G DVVL+
Sbjct: 130 RQPLLVAADVYRPAAVEQLVTLGQQVQVPVYAPGTDRDPVDIAREGVAEARRRGRDVVLI 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ ++ LM L ++ P +L V +A+ G DAV+ F+++L
Sbjct: 190 DTAGRLHIDDALMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLG-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ V+G P+ F G G+ L+ + + + +L
Sbjct: 242 --IDGVILTKLDG-DARGGAALSVRAVTGRPIKFAGLGERVDQLEPFHPERMASRIL 295
>gi|48478588|ref|YP_024294.1| signal recognition particle receptor FtsY [Picrophilus torridus DSM
9790]
gi|48431236|gb|AAT44101.1| signal recognition particle receptor FtsY [Picrophilus torridus DSM
9790]
Length = 315
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 11/199 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+KPYV++F+G+NG GK+T + K+A +L + V++AA DTFR+GA+EQ+ +
Sbjct: 117 KKPYVILFIGINGTGKTTTIGKIASYLKNNNKKVVIAAGDTFRAGAIEQISIIGEKTGTE 176
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ + + DPA VA +AI+ A D VL+D+AGRMQ N+ L+ + K+ + PDL L
Sbjct: 177 VIKHDFGSDPASVAYDAIEHARARRIDYVLIDSAGRMQTNKNLLSEMKKIKRVARPDLTL 236
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V + ++GNDA++Q F ++ DG++LTK DT D + GA +S+
Sbjct: 237 LVLDGMIGNDAIEQAKTFMNEIN----------FDGVVLTKLDT-DARGGAVISVAMEIK 285
Query: 561 APVMFVGCGQSYTDLKKLN 579
P+MFVG GQ D+ + +
Sbjct: 286 KPIMFVGVGQGLNDIMRFD 304
>gi|379003520|ref|YP_005259192.1| signal recognition particle-docking protein FtsY [Pyrobaculum
oguniense TE7]
gi|375158973|gb|AFA38585.1| signal recognition particle-docking protein FtsY [Pyrobaculum
oguniense TE7]
Length = 305
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 130/236 (55%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EAL+ +L+ +D +D E +P V+F+G NG GK+T LAK+AY L +
Sbjct: 80 AVLEALIGVLSDVPDVDFYQDSKNRLETSRPVTVMFLGPNGYGKTTTLAKLAYHLQERGF 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V+ AA DTFR+GA EQL H RR+ + Y DPA VA +A+Q A G VL+D
Sbjct: 140 RVVAAAADTFRAGAREQLEEHGRRVGFRVIGGSYGADPASVAYDAVQHARSKGFHYVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + P +FV +A +GN+A+ +++++ K
Sbjct: 200 TAGRMHTDANLMEELRKIQRVVEPQYSIFVFDAQLGNEAL-EIARYYSKYVK-------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ K D K G+ L+ +Y PV F+G GQSY DL + + V LL
Sbjct: 251 -IDGMIAAKVDAY-PKGGSILTFLYTLKRPVYFLGVGQSYKDLVQFTKQEYVSQLL 304
>gi|18313822|ref|NP_560489.1| signal recognition particle protein [Pyrobaculum aerophilum str.
IM2]
gi|18161384|gb|AAL64671.1| signal recognition particle protein (docking protein), probable
[Pyrobaculum aerophilum str. IM2]
Length = 305
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 133/236 (56%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EAL+ ++ +D +D + +P VV+F+G NG GK+T LAK+A+ L +
Sbjct: 80 AVFEALMGVIDDVPDVDFYQDSKRLLNETRPVVVMFLGPNGYGKTTTLAKLAFNLQEMGF 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V+ AA DTFR+GA EQL H +R+ + Y DPA VA +A+Q A G VL+D
Sbjct: 140 RVVAAAADTFRAGAREQLEEHGKRVGFKVISGPYGADPASVAYDALQHAKARGYHFVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + P +FV +A +GN+A+ +++K+ K
Sbjct: 200 TAGRMHTDANLMEELRKIQRVTEPHYSIFVFDAQLGNEAL-EIAKYYSKYVK-------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ TK D K G+ L+ +YV PV F+G GQ+Y DL K + + + LL
Sbjct: 251 -IDGMIATKVDAY-PKGGSILTFIYVLKRPVYFLGVGQTYRDLVKFSKQEYIGQLL 304
>gi|317121794|ref|YP_004101797.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
gi|315591774|gb|ADU51070.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermaerobacter marianensis DSM 12885]
Length = 445
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 157/297 (52%), Gaps = 36/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S+F+ + GK L +AD+E AL+ ++ L+ +V A+ + ++ L
Sbjct: 10 LQSVFKRLRGKGKLTEADVEAALREVRLALLEADVHFKVVKDFIARVRQRAVGQEVLESL 69
Query: 363 TPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP + + D L + ++ R P V+ VG+ G GK+T AK+A L +
Sbjct: 70 TPAQQVIKIVHDELTQLMGGQQARLDLGGAPPVPVMLVGLQGSGKTTTAAKLARLLARQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R AVEQL T +++Q+P+ G ++DP +A+E + EA R G DVV++
Sbjct: 130 RQPLLVAADVYRPAAVEQLVTLGQQIQLPVHAPGTDRDPVDIAREGVAEARRRGRDVVII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ ++ LM L ++ P +L V +A+ G DAV+ F+++L
Sbjct: 190 DTAGRLHIDDALMEELERIRQAVAPREILLVVDAMTGQDAVNVAETFHRRLG-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ V+G P+ FVG G+ L+ + + + +L
Sbjct: 242 --IDGVVLTKLDG-DARGGAALSVRAVTGRPIKFVGLGERVDQLEPFHPERMASRIL 295
>gi|395646258|ref|ZP_10434118.1| signal recognition particle-docking protein FtsY [Methanofollis
liminatans DSM 4140]
gi|395442998|gb|EJG07755.1| signal recognition particle-docking protein FtsY [Methanofollis
liminatans DSM 4140]
Length = 359
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 146/258 (56%), Gaps = 18/258 (6%)
Query: 332 KADLEPALKALKDRLMTKNVAAMEEALVRILTPR-RSIDILRDVHAAKEQRKPYVVVFVG 390
K DL + + + + T AA+ AL+R+L ID +R +P ++ G
Sbjct: 115 KEDLVGSHRKIGTSVDTVVTAALRGALLRVLGEGFDPIDYVR------SHERPVKILITG 168
Query: 391 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 450
VNG GK+T++AK+A++ ++ SV++ A DTFR+GA++Q+ HA RL V + + DP
Sbjct: 169 VNGTGKTTSIAKMAHYFKKNGFSVVLGAGDTFRAGAIDQIAEHATRLGVKVIQHQEGSDP 228
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A V + ++ A + DVVL DTAGR + + LM L K+ + PDLV++V EA+ GND
Sbjct: 229 AAVLYDTVEYAKAHEIDVVLADTAGRFHNRKNLMSQLDKIRRVMKPDLVVYVDEAVAGND 288
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
AV + FN DL + D ++LTK D +D + GAA+S+ G P++F+G GQ
Sbjct: 289 AVVRAKDFN----DLVGT------DAVMLTKAD-MDPRGGAAISIAQTIGKPILFLGTGQ 337
Query: 571 SYTDLKKLNVKSIVKTLL 588
Y D+ + +V L+
Sbjct: 338 GYDDIVPFCPERVVDELV 355
>gi|126460434|ref|YP_001056712.1| signal recognition particle-docking protein FtsY [Pyrobaculum
calidifontis JCM 11548]
gi|126250155|gb|ABO09246.1| signal recognition particle-docking protein FtsY [Pyrobaculum
calidifontis JCM 11548]
Length = 305
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 136/237 (57%), Gaps = 11/237 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +++++IL+ +D + ++ +P VV+F+G NG GK+T LAK+AY L++
Sbjct: 80 AVVDSVLQILSDVPDVDFYEEGGKLLDRARPVVVMFLGPNGYGKTTTLAKLAYHLMERGY 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+V+ AA DTFR+GA EQL H RR+ + Y DPA VA +A+Q A G VL+D
Sbjct: 140 TVVGAAADTFRAGAREQLEEHGRRVGFKVIGGPYGADPASVAFDAVQHARSRGHHFVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + P +FV +A +GN+A+ +++++ K
Sbjct: 200 TAGRMHTDANLMEELRKIQRVAEPHFSIFVFDAQLGNEAL-EIARYYSKYVR-------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
IDG++ TK D K G+ L+ +Y PV F+G GQSY DL K VK L++
Sbjct: 251 -IDGMIATKVDAY-PKGGSILTFMYTLKRPVYFLGVGQSYKDLVKFVKLDYVKQLVE 305
>gi|424811941|ref|ZP_18237181.1| signal recognition particle GTPase [Candidatus Nanosalinarum sp.
J07AB56]
gi|339756163|gb|EGQ39746.1| signal recognition particle GTPase [Candidatus Nanosalinarum sp.
J07AB56]
Length = 296
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 129/248 (52%), Gaps = 23/248 (9%)
Query: 342 LKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
+ DR+ +EE + L P + E +PY + VG NG GK+T A
Sbjct: 72 VSDRIQDAFRTVLEEQVSDDLDPAEKV---------AESGEPYTLYLVGFNGSGKTTTAA 122
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEA 461
K+ L Q + +V++ A DTFR+ ++EQL H +RL + YE DPA VA +A+ A
Sbjct: 123 KLTNTLQQKEHNVVLGAGDTFRAASIEQLEEHGKRLGTKVVSHEYESDPAAVAYDAVAHA 182
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQK 521
+ G V +VDTAGR ++ LM L K+I + PD+VL V +AL GND +Q+ +
Sbjct: 183 EKEGK-VAVVDTAGRSHADQNLMNELEKMIEVGEPDMVLLVVDALAGNDVENQVEAYQ-- 239
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVK 581
+ DG+++TK D +D+ GA ++ SG PV ++G GQ YTDL+ +
Sbjct: 240 ----------GMFDGLVVTKMD-VDEHGGALITAAQKSGKPVAYIGTGQEYTDLEDFDTT 288
Query: 582 SIVKTLLK 589
L +
Sbjct: 289 EFTDRLFE 296
>gi|327311560|ref|YP_004338457.1| signal recognition particle-docking protein FtsY [Thermoproteus
uzoniensis 768-20]
gi|326948039|gb|AEA13145.1| signal recognition particle-docking protein FtsY [Thermoproteus
uzoniensis 768-20]
Length = 311
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +AL+ ++ + D V A EQ +P VV+F+G NG GK+T LAK+AY +
Sbjct: 80 AVYDALLSLVGDVQDADFESAVIEAAEQARPVVVMFLGPNGYGKTTTLAKIAYLFKSRGL 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
++AA DTFR+GA EQL H +RL + + Y DPA VA +A+Q A G +VL+D
Sbjct: 140 QSVLAAADTFRAGAREQLEEHGKRLGLRVIGGKYGSDPASVAYDAVQHARSKGIPLVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM ++ LM L+K+ + P +FV +A +GN+A++ +++ ++
Sbjct: 200 TAGRMHTDKNLMDELAKIQRVVEPHFSVFVFDAQLGNEALEIARYYSKHVS--------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ TK D+ K G+ L+ +Y P+ F+G GQ Y DL K + + L+
Sbjct: 251 -IDGMVATKVDSY-PKGGSILTFLYTFKKPIYFLGVGQRYEDLVKFKKEEYIAQLI 304
>gi|70607206|ref|YP_256076.1| signal recognition particle protein [Sulfolobus acidocaldarius DSM
639]
gi|449067448|ref|YP_007434530.1| signal recognition particle [Sulfolobus acidocaldarius N8]
gi|449069720|ref|YP_007436801.1| signal recognition particle [Sulfolobus acidocaldarius Ron12/I]
gi|68567854|gb|AAY80783.1| signal recognition particle [Sulfolobus acidocaldarius DSM 639]
gi|449035956|gb|AGE71382.1| signal recognition particle [Sulfolobus acidocaldarius N8]
gi|449038228|gb|AGE73653.1| signal recognition particle [Sulfolobus acidocaldarius Ron12/I]
Length = 208
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 118/195 (60%), Gaps = 11/195 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+KP+V++F GVNGVGK+T +AKV L ++ +S ++AA DTFR+ A EQL HA +L+V
Sbjct: 10 KKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQ 69
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ Y DPA VA +AI A DVVL+DTAGRM + L+ L +++ + PD +
Sbjct: 70 LIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKRVLRIAKPDFRI 129
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
+ ++L G+DA++Q F + D ++LTK D D K G ALS+ Y
Sbjct: 130 LILDSLAGSDALEQARHFENNVG----------YDAVILTKVDA-DAKGGIALSLAYELK 178
Query: 561 APVMFVGCGQSYTDL 575
PV+++G GQ+Y DL
Sbjct: 179 KPVVYMGVGQNYDDL 193
>gi|145591809|ref|YP_001153811.1| signal recognition particle-docking protein FtsY [Pyrobaculum
arsenaticum DSM 13514]
gi|145283577|gb|ABP51159.1| signal recognition particle-docking protein FtsY [Pyrobaculum
arsenaticum DSM 13514]
Length = 305
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 130/236 (55%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ +AL+ +L+ +D +D E +P V+F+G NG GK+T LAK+AY L +
Sbjct: 80 AVLDALMGVLSDVPDVDFYQDSKNRLETSRPVTVMFLGPNGYGKTTTLAKLAYHLQERGF 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
V+ AA DTFR+GA EQL H RR+ + Y DPA VA +A+Q A G VL+D
Sbjct: 140 RVVAAAADTFRAGAREQLEEHGRRVGFRVIGGPYGADPASVAYDAVQHARSKGFHYVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM + LM L K+ + P +FV +A +GN+A+ +++++ K
Sbjct: 200 TAGRMHTDANLMEELRKIQRVVEPQYSIFVFDAQLGNEAL-EIARYYSKYVK-------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ K D K G+ L+ +Y PV F+G GQSY DL + + V LL
Sbjct: 251 -IDGMIAAKVDAY-PKGGSILTFLYTLKRPVYFLGVGQSYKDLVQFTKQEYVSQLL 304
>gi|374326926|ref|YP_005085126.1| signal recognition particle-docking protein FtsY [Pyrobaculum sp.
1860]
gi|356642195|gb|AET32874.1| signal recognition particle-docking protein FtsY [Pyrobaculum sp.
1860]
Length = 305
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 140/246 (56%), Gaps = 14/246 (5%)
Query: 343 KDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAK 402
+D+++ K A+ +AL+ +L+ +D +D E +P VV+F+G NG GK+T LAK
Sbjct: 73 RDKVVKK---AVFDALLGVLSDVPDVDFYQDARRVMEGARPVVVMFLGPNGYGKTTTLAK 129
Query: 403 VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEAT 462
+A+ L + V+ AA DTFR+GA EQL H RR+ + Y DPA VA +A+Q A
Sbjct: 130 LAFKLQEMGYKVVAAAADTFRAGAREQLEEHGRRVGFRVVGGPYGADPAAVAFDAVQHAR 189
Query: 463 RNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKL 522
G VL+DTAGRM + LM+ LSK+ + P +FV +A +GN+A+ +++++ K
Sbjct: 190 SRGIHFVLIDTAGRMHTDANLMQELSKIQRVAEPHYSVFVFDAQLGNEAL-EIARYYSKY 248
Query: 523 ADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKS 582
IDG++ TK D K G+ L+ +Y PV F+G GQ+Y DL + +
Sbjct: 249 VK---------IDGMIATKVDAY-PKGGSILTFLYTLKRPVYFLGVGQTYRDLVPFSKQD 298
Query: 583 IVKTLL 588
+ L+
Sbjct: 299 YIGQLV 304
>gi|352682984|ref|YP_004893508.1| signal recognition particle receptor [Thermoproteus tenax Kra 1]
gi|350275783|emb|CCC82430.1| signal recognition particle receptor (docking protein)
[Thermoproteus tenax Kra 1]
Length = 306
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 137/236 (58%), Gaps = 11/236 (4%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ EAL+ ++ +D ++ A ++ +P VV+F+G NG GK+T LAK+AY +
Sbjct: 80 AVYEALLSVIGDIPDVDFEKEAVALLDKTRPVVVMFLGPNGYGKTTTLAKMAYLFRARGL 139
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
++AA DTFR+GA EQL H +RL + + Y DPA VA +AIQ A G +VL+D
Sbjct: 140 QSVLAAADTFRAGAREQLEEHGKRLGLRVIGGKYGADPASVAYDAIQHAASRGVPLVLID 199
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGRM ++ LM LSK+ + P +FV ++ +GN+A++ +++ ++
Sbjct: 200 TAGRMHTDKNLMEELSKIQRVAQPHFSIFVFDSQLGNEALEIARYYSRYVS--------- 250
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++ TK D+ K G+ L+ ++V P+ ++G GQ Y DL K + V L+
Sbjct: 251 -IDGMIATKVDSY-PKGGSILTFLHVFRRPIYYLGVGQRYEDLVKFKKEEYVAQLV 304
>gi|317133004|ref|YP_004092318.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
gi|315470983|gb|ADU27587.1| signal recognition particle protein [Ethanoligenens harbinense
YUAN-3]
Length = 443
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 160/297 (53%), Gaps = 37/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S+ F+ + K L +AD+ A++ ++ L+ +V A+ A++ L
Sbjct: 10 LSAAFKRLRSKGKLTEADVRQAMREVRLALLEADVNYKIAKQFVNDVTERAIGSAVLESL 69
Query: 363 TP-RRSIDILRDVHAA---KEQRK-------PYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ + A EQ + P V++ G+ G GK+T+ AK+A + +
Sbjct: 70 TPAQQVIKIVNEELTALMGGEQSRIRYASKPPTVILLCGLQGSGKTTHAAKLALSMKKQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++AACD +R A++QL+ + VP+FE+G + DP +AK A+ A +GSDV+++
Sbjct: 130 KRPLLAACDVYRPAAIKQLQVVGEKAGVPVFEQG-QGDPVKIAKAALHHAKDHGSDVLIL 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L ++ PD +L V +A+ G DAV+ S FN+ L
Sbjct: 189 DTAGRLHVDEALMDELKRIKAAVEPDEILLVVDAMTGQDAVNVASSFNEVLG-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS+ V+G P+ F G G+ DL+ + + + +L
Sbjct: 241 --IDGVILTKLDG-DTRGGAALSVRAVTGKPIKFAGTGEKLDDLEPFHPERMASRIL 294
>gi|402836125|ref|ZP_10884675.1| signal recognition particle protein [Mogibacterium sp. CM50]
gi|402272137|gb|EJU21360.1| signal recognition particle protein [Mogibacterium sp. CM50]
Length = 447
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 36/293 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
F+++ GK + + D++ A++ +K L+ +V AM +++ LTP +
Sbjct: 14 FRNLRGKGVVSEKDIDAAMREVKLALLEADVNFKVVKQFVATIKDKAMGADVLKSLTPGQ 73
Query: 367 SI-----DILRDVHAAKEQRKPY------VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ + L D+ + Y V + VG+ G GK+T K+A WL Q+ M
Sbjct: 74 QVLKIVKEELVDMMGGANSKLTYSPSGFTVYMMVGLQGTGKTTTCGKLAAWLKQNGKKPM 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL + + P+F +P +AK A++EA R G +V++VDTAG
Sbjct: 134 LCACDVYRPAAIDQLEVVGKAVNTPVFTMRESNEPLAIAKAAVEEAKRKGCNVLIVDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+Q +E LM L +L P +L +AL G DAV+ + FN+ L ID
Sbjct: 194 RLQIDEALMDELVQLKKGIRPHEILLAVDALTGQDAVNIAAGFNETLG----------ID 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GI++TK D D + GAALS V+G P+ F+G G+ Y L+ + I +L
Sbjct: 244 GIIMTKMDG-DSRGGAALSTKMVTGKPIKFMGTGEKYNALEPFHPDRIASRIL 295
>gi|257076819|ref|ZP_05571180.1| signal recognition particle receptor FtsY [Ferroplasma acidarmanus
fer1]
Length = 311
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 127/209 (60%), Gaps = 11/209 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
++KP+V++F+G+NG GK+T + K+AY+L + SV+++A DTFR+GA++QL A + V
Sbjct: 112 EKKPFVILFLGINGTGKTTTIGKLAYYLKSNNKSVVLSASDTFRAGAIDQLNILAGNVGV 171
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
I + + DPA VA +AI+ A D VL+D+AGRMQ N+ L+ + K+ + PD+
Sbjct: 172 EIIKHDFRSDPASVAFDAIEHAKARKMDYVLIDSAGRMQTNKNLLDEMKKIKRVAKPDMT 231
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
+ V +A++G D ++Q F+ ++ D +++TK DT D K G+ +S+
Sbjct: 232 ILVLDAMIGQDVINQALTFSSEIN----------YDSVIVTKLDT-DAKGGSIISISAGI 280
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++FVG GQ D+ +V+ +K +
Sbjct: 281 KKPILFVGIGQEMDDIIPFDVEWYLKKIF 309
>gi|15828813|ref|NP_326173.1| signal recognition particle protein [Mycoplasma pulmonis UAB CTIP]
gi|14089756|emb|CAC13515.1| SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG)
[Mycoplasma pulmonis]
Length = 449
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 158/281 (56%), Gaps = 37/281 (13%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
Q ++ K L++AD+ +K +K L+ +V A+E L+ L P +
Sbjct: 13 IQKMSKKTTLNEADILEVIKDIKFALLEADVNLLVVKKFIKDVKEKALESELIGKLNPSQ 72
Query: 367 S-IDILRD---------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV--SV 414
+ I I++D K +KP+V++FVG+ G GK+T +AKVAY+L + K +
Sbjct: 73 TMIKIVKDELTTLLGGKAQEIKIVKKPHVIMFVGLQGGGKTTTVAKVAYYLRKKKFVENP 132
Query: 415 MMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTA 474
++ ACD +R A++QL+T A+++Q+P++ P A++A+ +A + +D+V++DTA
Sbjct: 133 LLVACDVYRPAAIDQLQTLAKQIQIPVYANDVSVSPIKTARQALDQAYKEKNDLVIIDTA 192
Query: 475 GRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLI 534
GR+ +E LM L + PD ++FV +A+ G D ++ F++KL+ LSSS
Sbjct: 193 GRLSIDEKLMEELLLIKKEIKPDEIIFVADAMSGQDIINVAKTFHEKLS-LSSS------ 245
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
++TK D+ D + GAALS+ + P+ F+G G+ +++
Sbjct: 246 ---IITKLDS-DARGGAALSIREILNIPIKFIGTGEKISNI 282
>gi|333897182|ref|YP_004471056.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112447|gb|AEF17384.1| signal recognition particle protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 446
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 150/288 (52%), Gaps = 36/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
TG +F+ + GK L + D++ A+K +K L+ +V ++ + ++
Sbjct: 7 TGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVM 66
Query: 360 RILTPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + D L + +KE + P V++ VG+ G GK+T K+A +L
Sbjct: 67 ESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTVIMMVGLQGSGKTTTSGKLANYLR 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
S ++ ACD +R A++QL+ + VP+F G + P +AK +I A N +V
Sbjct: 127 SKGKSPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTSPVDIAKASIDFARNNNYNV 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ +E LM L + NPD +L V +A+ G D V+ FN+KL
Sbjct: 187 VIIDTAGRLHVDEELMDELKNIKDAVNPDEILLVVDAMTGQDVVNVAESFNEKLD----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
IDG++LTK D D + GAALS+ V+ P+ F+ G+ +TD++
Sbjct: 242 -----IDGVILTKLDG-DTRGGAALSVKAVTRKPIKFIASGEKFTDIE 283
>gi|269836377|ref|YP_003318605.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
gi|269785640|gb|ACZ37783.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
20745]
Length = 504
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 155/279 (55%), Gaps = 36/279 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+++FQ I K L + D++ A++ ++ L+ +V A+ E +++ L
Sbjct: 9 LTAVFQRIGNKGRLTEQDVDEAMREVRRALLEADVNYKVVRDFVSAVRERAVGEEVLKAL 68
Query: 363 TP-RRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+RD V Q P +V+ VG+ G GK+T++AK+A L +
Sbjct: 69 TPAQQVISIVRDELIKILGEERVPLQLAQVPPTIVMVVGLQGSGKTTHVAKIANLLKKEG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+M A D +R A++QL+T ++ VP++ +G + +P +AK A++ A G VVL+
Sbjct: 129 RRPLMVAADVYRPAAIDQLQTLGGQIDVPVYSEGTKANPVDIAKNAVKLARDRGYTVVLI 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+Q +EP+M+ + ++ P +L V +A+ G +AV+ +F+++LA
Sbjct: 189 DTAGRLQIDEPMMQEVERIAEAVKPHEILLVADAMTGQEAVNVAQEFHRRLA-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
+ G++LTK D D + GAALS+ V G P+ ++G G+
Sbjct: 241 --LTGLVLTKMDG-DARGGAALSIRSVVGVPIKYIGTGE 276
>gi|357038757|ref|ZP_09100554.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355359549|gb|EHG07311.1| signal recognition particle protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 454
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 152/284 (53%), Gaps = 36/284 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRILTPRRSIDILRDVHAAK 378
F+ + GK L + D++ ALK ++ L+ +V +++ + RI ID+L+ + A+
Sbjct: 14 FKKLRGKGRLTEEDVDQALKEVRRALIGADVNFLVVKDFIARIRERAVGIDVLQSLTPAQ 73
Query: 379 EQRK-----------------------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ K P VV+ VG++G GK+T AK+A + + +
Sbjct: 74 QVIKIVHDELTSLMGGTRSKIELAPSPPTVVMMVGLHGAGKTTTTAKLANHMRRQGRRPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL+ +L VP+F G P +A+ A+++A R G+D+V++DTAG
Sbjct: 134 LVACDIYRPAAIKQLQVLGGQLDVPVFNMGDSVAPPDIARAAVEKARREGNDLVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM L ++ P+ +L V +++ G DAV+ FN++L+ +
Sbjct: 194 RLHIDEELMTELHNIVETVGPNEILLVVDSMTGQDAVNVAKTFNERLS----------LT 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
G++LTK D D + GAALS+ V+G P+ FVG G+ L+ +
Sbjct: 244 GVVLTKLDG-DTRGGAALSVKAVTGCPIKFVGMGEKLDALEDFH 286
>gi|429724972|ref|ZP_19259833.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
gi|429151434|gb|EKX94302.1| signal recognition particle protein [Prevotella sp. oral taxon 473
str. F0040]
Length = 448
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARR 436
K + +P V++ G+NG GK+T K+A +L K ++AACDT+R A+EQLR A +
Sbjct: 94 KLENRPSVILMAGLNGAGKTTLSGKLALFLKTKKNRRPLLAACDTYRPAAIEQLRVLAEQ 153
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VPI+ EKDP +A AIQEA D V+VDTAGR+ +E LM ++ + NP
Sbjct: 154 IDVPIYLNLEEKDPVKIALAAIQEAKAKSYDTVIVDTAGRLAIDETLMNEIAAVKEATNP 213
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D LFV +A+ G DAV+ +FN +L DG++LTK D D + GAALS+
Sbjct: 214 DETLFVVDAMTGQDAVNTAKEFNSRLD----------FDGVVLTKLDG-DTRGGAALSIR 262
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V P+ FVG G+ L
Sbjct: 263 SVVNKPIKFVGTGEKMEAL 281
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 156/288 (54%), Gaps = 36/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T + +FQ I K L + D++ AL+ ++ L+ +V A+ E ++
Sbjct: 6 TDRLTQVFQRIGRKGRLTEEDVDEALREVRRALLEADVHYTVVRDFIAAVRERAIGEEVL 65
Query: 360 RILTPRRSI------DILRDVHAAK-----EQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
R LTP + + +++R + + + + P +++ VG+ G GK+T +AK+ Y L
Sbjct: 66 RSLTPAQQVIAIVHQELVRVLGSERVPLLWASQPPTIIMLVGLQGSGKTTQVAKLGYHLR 125
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ A D +R AVEQLRT ++ +P++++G + DP K A++ A G +
Sbjct: 126 KEGRRPLLVAADIYRPAAVEQLRTLGKQHDLPVYDEGTKVDPVETVKHAVKVARDQGYNP 185
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+Q +EP+M+ L ++ P +L V +A+ G +AV+ +F+++L+
Sbjct: 186 VIIDTAGRLQIDEPMMQELERMAEAVRPTEILLVADAMTGQEAVNVAKEFHRRLS----- 240
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G++LTK D D + GAALS+ V G P+ F+G G+ L+
Sbjct: 241 -----LTGLILTKLDG-DARGGAALSIRAVVGVPIKFIGTGERVDALE 282
>gi|390934862|ref|YP_006392367.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570363|gb|AFK86768.1| signal recognition particle protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 446
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 150/288 (52%), Gaps = 36/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
TG +F+ + GK L + D++ A+K +K L+ +V ++ + ++
Sbjct: 7 TGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVM 66
Query: 360 RILTPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + D L + +KE + P V++ VG+ G GK+T K+A +L
Sbjct: 67 ESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTVIMMVGLQGSGKTTTSGKLANYLK 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
S ++ ACD +R A++QL+ + VP+F G + P +AK +I A N +V
Sbjct: 127 SKGKSPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTSPVDIAKASIDFAKNNNYNV 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ +E LM L + +PD +L V +A+ G D V+ FN+KL
Sbjct: 187 VIIDTAGRLHVDEELMDELKNIKDAVHPDEILLVVDAMTGQDVVNVAESFNEKLD----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+DG++LTK D D + GAALS+ V+ P+ F+ G+ +TD++
Sbjct: 242 -----VDGVILTKLDG-DTRGGAALSVKAVTHKPIKFIASGEKFTDIE 283
>gi|379727454|ref|YP_005319639.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
gi|376318357|dbj|BAL62144.1| signal recognition particle protein [Melissococcus plutonius
DAT561]
Length = 471
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 119/200 (59%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ G+ G GK+T K+A +L+ Q +M A D +R A+EQL+ ++
Sbjct: 96 KAPKIPTIIMMAGLQGAGKTTFTGKLANYLIKQENARPLMIAADVYRPAAIEQLKVLGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L VP+F+KG E +P + ++ I A +D VL+DTAGR+ +E LM L ++ L P
Sbjct: 156 LDVPVFDKGTEINPVEIVRQGIALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKELAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ +L V +A+ G DAV+ FNQ+L I G+++TK D+ D + GAALS+
Sbjct: 216 NEILLVVDAMTGQDAVNVAESFNQQLG----------ITGVVITKLDS-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+GAP+ +VG G+ TDL+
Sbjct: 265 AVTGAPIKYVGSGEKLTDLE 284
>gi|373115225|ref|ZP_09529401.1| signal recognition particle protein [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670517|gb|EHO35596.1| signal recognition particle protein [Lachnospiraceae bacterium
7_1_58FAA]
Length = 452
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T S+ F+ + GK L +AD++ A+K ++ L+ +V A+ ++
Sbjct: 7 TEKLSAAFKKLRGKGRLSEADVKEAMKEIRMALLEADVNFKVVKQFVATVTERAIGSDVL 66
Query: 360 RILTPRRSIDIL-----------RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + I + + + P VV+ VG+NG GK+TN AK+A ++
Sbjct: 67 ESLTPAQMIVKIVNEELTALMGGENTKLTISPKPPTVVMLVGLNGAGKTTNGAKLAGFMK 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ ACDTFR A+ QL +++ VP+F+ G + DP +A+ I+ A ++G+D+
Sbjct: 127 KQGKRPLLVACDTFRPAAITQLEVVGQQVDVPVFQMG-QIDPVDIARAGIEHAKKHGNDI 185
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V +DTAGR+ +E LM L + +P +L + +A++G DAV+ F++ L
Sbjct: 186 VFIDTAGRLHVDEELMEQLKVMKAAIDPTEILLIVDAMIGQDAVNAAKTFDEALD----- 240
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
I G++LTK D D + GAALS+ V+G P+ FVG G+
Sbjct: 241 -----ITGVMLTKLDG-DARGGAALSIKAVTGKPIKFVGVGE 276
>gi|365842283|ref|ZP_09383312.1| signal recognition particle protein [Flavonifractor plautii ATCC
29863]
gi|364576124|gb|EHM53471.1| signal recognition particle protein [Flavonifractor plautii ATCC
29863]
Length = 452
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 150/282 (53%), Gaps = 37/282 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T S+ F+ + GK L +AD++ A+K ++ L+ +V A+ ++
Sbjct: 7 TEKLSAAFKKLRGKGRLSEADVKEAMKEIRMALLEADVNFKVVKQFVATVTERAIGSDVL 66
Query: 360 RILTPRRSIDIL-----------RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + I + + + P VV+ VG+NG GK+TN AK+A ++
Sbjct: 67 ESLTPAQMIVKIVNEELTALMGGENTKLTISPKPPTVVMLVGLNGAGKTTNGAKLAGFMK 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ ACDTFR A+ QL +++ VP+F+ G + DP +A+ I+ A ++G+D+
Sbjct: 127 KQGKRPLLVACDTFRPAAITQLEVVGQQVDVPVFQMG-QIDPVDIARAGIEHAKKHGNDI 185
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V +DTAGR+ +E LM L + +P +L + +A++G DAV+ F++ L
Sbjct: 186 VFIDTAGRLHVDEELMEQLKVMKAAIDPTEILLIVDAMIGQDAVNAAKTFDEALD----- 240
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
I G++LTK D D + GAALS+ V+G P+ FVG G+
Sbjct: 241 -----ITGVMLTKLDG-DARGGAALSIKAVTGKPIKFVGVGE 276
>gi|217076198|ref|YP_002333914.1| ffh signal recognition particle protein [Thermosipho africanus
TCF52B]
gi|217036051|gb|ACJ74573.1| ffh signal recognition particle protein [Thermosipho africanus
TCF52B]
Length = 435
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 158/295 (53%), Gaps = 35/295 (11%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S F++++GK + + +++ A+K +K L+ +V A E +++ L
Sbjct: 9 LSKAFKTLSGKGKITEKNIKEAIKMVKLSLLEADVNYKVVKEFIAEVTEKATGEEVLKSL 68
Query: 363 TP-RRSIDILRD----VHAAKEQ----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
TP + I ILRD V K Q P ++ VG+ G GK+T+ AK+A L +
Sbjct: 69 TPDQMFIKILRDELIRVMGEKSQLSLVHSPSYIMMVGLQGSGKTTSAAKLANLLKKKGKK 128
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
+ A DT+R A++QL T +++ VP+F G KDP + +EAI+E +G +VV+ DT
Sbjct: 129 TFLVAADTYRPAAIDQLITLGKKIDVPVF-YGDRKDPVKIVREAIKEVKDSGYNVVIFDT 187
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ ++ +M L ++ + NPD +L V +A+ G DAV+ FN++L
Sbjct: 188 AGRLHVDDEMMNELEEIKDILNPDEILMVVDAMAGQDAVNSAKIFNERLD---------- 237
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G ++TK D D + G LS+ Y++ P+ F+G G+ DL++ + + I +L
Sbjct: 238 VTGYVVTKMDG-DARGGVILSIRYITNKPIKFIGVGEKIEDLEEFHPERIASRIL 291
>gi|406669311|ref|ZP_11076590.1| signal recognition particle-docking protein FtsY [Facklamia ignava
CCUG 37419]
gi|405583824|gb|EKB57755.1| signal recognition particle-docking protein FtsY [Facklamia ignava
CCUG 37419]
Length = 341
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 141/257 (54%), Gaps = 20/257 (7%)
Query: 341 ALKDRLMTKNVAAME---EALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKS 397
A++DR+ ++ ++++E +A+V + D + V + P V++FVGVNGVGK+
Sbjct: 87 AIRDRIESQQLSSLEDVKQAIVSEMVRIYEKDDTQTVLLNENPDGPTVILFVGVNGVGKT 146
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 457
T++ K+ Y L Q V+MAA DTFR+GAVEQL RL +P+ + + DPA V EA
Sbjct: 147 TSVGKIGYQLQQQGHKVLMAAGDTFRAGAVEQLNVWGERLNIPVIQGVAQADPASVVYEA 206
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL---IYLNNPD---LVLFVGEALVGNDA 511
+Q A D +LVDTAGR+Q LM L+K+ I NP+ VL V +A G +A
Sbjct: 207 VQAAKEGQYDYLLVDTAGRLQTKANLMEELAKMKRIIERENPNGVQEVLLVLDATTGQNA 266
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
+ Q +FN+ I G++LTK D K G LS+ Y PV +VG G+
Sbjct: 267 LTQAKQFNEATE----------ITGLVLTKLDGT-AKGGVILSIRYELDIPVKYVGLGEQ 315
Query: 572 YTDLKKLNVKSIVKTLL 588
DL+ + + + +L+
Sbjct: 316 AKDLQVFDPEQYMYSLI 332
>gi|220905067|ref|YP_002480379.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869366|gb|ACL49701.1| signal recognition particle protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 512
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 121/208 (58%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
R+P V++ VG+ G GK+T+ K+A L + K+ + D +R A++QL A++L +P
Sbjct: 98 REPAVIMLVGLQGSGKTTSAGKIANILRKQKMRPYLVPADVYRPAAIDQLTVLAKQLDMP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ + DP +AK A++EA R + V+L+DTAGR+ +EPLM+ L + P +L
Sbjct: 158 CYPSTVDMDPVDIAKAALEEARREQATVLLLDTAGRLHVDEPLMQELEAIKAAVQPQEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A+ G DAV FN++L + G++LTK D D + GAALS+ V+G
Sbjct: 218 FVADAMTGQDAVTVAESFNERLG----------VTGVVLTKMDG-DARGGAALSIRAVTG 266
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
APV FVG G+ ++++ + I +L
Sbjct: 267 APVKFVGMGEKLSEMEVFHPDRIAGRIL 294
>gi|338730579|ref|YP_004659971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermotoga
thermarum DSM 5069]
gi|335364930|gb|AEH50875.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermotoga
thermarum DSM 5069]
Length = 433
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 163/296 (55%), Gaps = 36/296 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S +F+S++G+ + + ++E A+K +K L+ +V A+ E ++R L
Sbjct: 9 LSKIFRSLSGRGKITEKNIEEAVKQVKISLLEADVNFKVVKEFVESVKAKALGEEVLRSL 68
Query: 363 TP-RRSIDILRD-------VHAAKEQRK--PYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
TP ++ I I+RD H + K P +++ VG+ G GK+T AK+A +L ++
Sbjct: 69 TPDQQFIKIIRDELISILGRHPSTLNLKHHPAIIMIVGLQGSGKTTTAAKLALYLKKNGR 128
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+ ++ A DT+R A++QL + + +P+F G K+P + +EA+ A + +VV++D
Sbjct: 129 NPILVAADTYRPAAIDQLEKLGKSINIPVF-TGDRKNPLKIVEEALSFAKNSQYNVVIMD 187
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ ++ +M L K+ + NPD +L V +A+VG DAV+ +F+++L
Sbjct: 188 TAGRLHIDDEMMEELEKIKNITNPDEILMVVDAMVGQDAVNSALEFDKRLN--------- 238
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G +++K D D + G LS+ YV+G PV F+G G+ L+ + IV +L
Sbjct: 239 -LTGFIVSKMDG-DARGGVILSISYVTGKPVKFIGTGEKVDALEPFYAERIVSRIL 292
>gi|428773330|ref|YP_007165118.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
gi|428687609|gb|AFZ47469.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
Length = 483
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 121/204 (59%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V AK ++ P V++ G+ G GK+T AK+A +L + K S +M A D +R A++QL T
Sbjct: 90 NVPLAKAEKAPTVILMAGLQGTGKTTATAKLALYLQKQKRSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++++P+FE G + +P +A++ + A G D V++DTAGR+Q ++ +M LS++
Sbjct: 150 LGEQIKIPVFELGSDANPVEIARQGVVSAQEQGIDTVIIDTAGRLQIDQEMMGELSQIKS 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
NPD VL V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 TVNPDEVLLVVDAMTGQEAANLTRTFHEEIG----------ITGAILTKMDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ F+G G+ L+
Sbjct: 259 LSVRTISGKPIKFIGVGEKVEALE 282
>gi|227892628|ref|ZP_04010433.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
gi|227865560|gb|EEJ72981.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
Length = 476
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 120/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP+F + EKD A + K+ + EA +N +D VL+DTAGR++ +EPLM L ++ + P
Sbjct: 156 LKVPVFSEDGEKDVAKIVKDGLAEADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ TDL
Sbjct: 265 AVTGKPILFTGQGEKLTDL 283
>gi|419760758|ref|ZP_14287026.1| signal recognition particle protein Srp54 [Thermosipho africanus
H17ap60334]
gi|407514122|gb|EKF48973.1| signal recognition particle protein Srp54 [Thermosipho africanus
H17ap60334]
Length = 429
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 158/295 (53%), Gaps = 35/295 (11%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S F++++GK + + +++ A+K +K L+ +V A E +++ L
Sbjct: 9 LSKAFKTLSGKGKITEKNIKEAIKMVKLSLLEADVNYKVVKEFIAEVTEKATGEEVLKSL 68
Query: 363 TP-RRSIDILRD----VHAAKEQ----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
TP + I ILRD V K Q P V+ VG+ G GK+T+ AK+A L +
Sbjct: 69 TPDQMFIKILRDELIRVMGEKSQLSLVHSPSYVMMVGLQGSGKTTSSAKLANLLKKKGKK 128
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
+ A DT+R A++QL T +++ VP+F G KDP + +EAI+E +G +VV+ DT
Sbjct: 129 PFLVAADTYRPAAIDQLITLGKKIDVPVF-YGDRKDPVKIVREAIKEVKDSGYNVVIFDT 187
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ ++ +M L ++ + NPD +L V +A+ G DAV+ FN++L
Sbjct: 188 AGRLHIDDEMMNELEEIKDILNPDEILMVVDAMAGQDAVNSAKIFNERLD---------- 237
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G ++TK D D + G LS+ Y++ P+ F+G G+ DL++ + + I +L
Sbjct: 238 VTGYVVTKMDG-DARGGVILSIRYITNKPIKFIGVGEKIEDLEEFHPERIASRIL 291
>gi|293374741|ref|ZP_06621049.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325837601|ref|ZP_08166448.1| signal recognition particle protein [Turicibacter sp. HGF1]
gi|292646655|gb|EFF64657.1| signal recognition particle protein [Turicibacter sanguinis PC909]
gi|325490903|gb|EGC93202.1| signal recognition particle protein [Turicibacter sp. HGF1]
Length = 475
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 162/298 (54%), Gaps = 37/298 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S +S+ K L + D++ ++ ++ L+ +V A+ EA+++ L
Sbjct: 10 LQSALKSVTRKGKLTEKDVDVMMREVRLALLEADVNIKVVREFINEVKEKAVGEAVLKSL 69
Query: 363 TP-RRSIDILRDV------HAAKE----QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-H 410
TP ++ I I+ + +A E KP V + VG+ G GK+T+ K++ +L +
Sbjct: 70 TPGQQVIKIVNEELTKLMGDSAAELNFGHAKPAVFMMVGLQGAGKTTHTGKISSYLRKKE 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
K + ++ ACD +R AV+QL+T ++L +P++EKG +P +AKEA+ A NG D+V+
Sbjct: 130 KKNPLLVACDVYRPAAVDQLKTIGKQLNIPVYEKGTSMNPVDIAKEAMTYARENGHDLVI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +E LM L + L NP +L V +A+ G DAV+ F+ +L DL+
Sbjct: 190 IDTAGRLHIDEQLMDELKNIKELVNPQEILLVVDAMTGQDAVNVAQSFHDQL-DLT---- 244
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G++LTK D D + GAALS+ ++ P+ F+G G+ L+ + + + +L
Sbjct: 245 -----GVVLTKLDG-DTRGGAALSIRKITNVPIKFIGLGEKLDTLEVFHPERMASRIL 296
>gi|154498106|ref|ZP_02036484.1| hypothetical protein BACCAP_02087 [Bacteroides capillosus ATCC
29799]
gi|150273096|gb|EDN00253.1| signal recognition particle protein [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 456
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 156/283 (55%), Gaps = 38/283 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T S+ F+ + GK L +AD++ A+K ++ L+ +V A+ ++
Sbjct: 7 TEKLSNAFKKLRGKGRLTEADVKEAMKEIRMALLEADVNYKVVKDFVAKVTERAVGSDVL 66
Query: 360 RILTPRRSI--------DILRDVHAAK---EQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + I L +AK + P VV+ VG+NG GK+TN AK+A ++
Sbjct: 67 ESLTPAQMIVKIVNEELTALMGGESAKLTISPKPPTVVMLVGLNGAGKTTNGAKLAGFMK 126
Query: 409 -QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
Q+ ++ ACDTFR A++QL +L VP+F++G DP +AK I+ A +G+D
Sbjct: 127 KQNGKRPLLVACDTFRPAAIQQLEVVGGQLGVPVFQQGL-GDPVEIAKAGIEHARTHGND 185
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
+V +DTAGR+ ++ LM LS++ +P +L + +A++G DAV+ F+Q L DL+
Sbjct: 186 IVFLDTAGRLHVDDQLMAELSRMKEAVSPTEILLIVDAMIGQDAVNAAKVFDQTL-DLT- 243
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
G++LTK D D + GAALS+ V+G P+ F+G G+
Sbjct: 244 --------GVMLTKLDG-DARGGAALSIKAVTGKPIKFIGTGE 277
>gi|13541363|ref|NP_111051.1| Signal recognition particle GTPase [Thermoplasma volcanium GSS1]
gi|14324747|dbj|BAB59674.1| signal recognition particle protein dpa [Thermoplasma volcanium
GSS1]
Length = 287
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+KP+V++F+G+NG GK+T + KVA +L SV+++A DTFR+GA+EQL + + V
Sbjct: 85 KKPFVIMFLGINGTGKTTTIGKVAKYLKSKGKSVVLSASDTFRAGAIEQLSMIGKEIGVE 144
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ + DP+ VA +AIQ A D VLVDTAGRM N+ LM + K+ ++NPD+ L
Sbjct: 145 VIKHEKGSDPSSVAFDAIQHAKARNIDYVLVDTAGRMNTNKNLMDEMKKIKRVSNPDITL 204
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V +A+ G D+++Q F++ + D +++TK DT D + G+ LS+ +
Sbjct: 205 LVLDAVAGQDSINQARTFHENVG----------FDAVIVTKLDT-DARGGSILSIYHDLR 253
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV+F GQ D+ + + ++ L+
Sbjct: 254 KPVLFACVGQGLDDIMQFDADWYIEKLM 281
>gi|312898910|ref|ZP_07758298.1| signal recognition particle protein [Megasphaera micronuciformis
F0359]
gi|310620072|gb|EFQ03644.1| signal recognition particle protein [Megasphaera micronuciformis
F0359]
Length = 449
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 36/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------------AAMEEALVRI 361
F + F+ + GK L + D+ ALK ++ L+ +V A EE +
Sbjct: 10 FQAAFKKLRGKGKLTEEDVNEALKEMRRALLEADVNFAVTKDFIKRVREKAVGEEVFSTL 69
Query: 362 LTPRRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+ I I+RD R P VV+ G+ G GK+T AK+A ++
Sbjct: 70 NAAQTVIKIVRDELTDLLGGTQSRITISSRPPTVVMLAGLQGAGKTTTAAKLAKRFVRQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ ACD +R A+EQLR + L +P++ + KDP +A+ A+ AT + DVV+V
Sbjct: 130 KHPLLVACDVYRPAAIEQLRVLGKELNIPVYSEDDSKDPVAIAERAVPYATSHLCDVVIV 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L ++ +P +L V +A+ G DAV F++ L
Sbjct: 190 DTAGRLHIDEDLMGELVRIKEDIHPHEILLVVDAMTGQDAVTAAEAFDKALG-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
IDG+++TK D D + GAALS+ V+G P+ F+G + L++ +
Sbjct: 242 --IDGVIMTKLDG-DARGGAALSVKAVTGKPIKFIGVSEKTDGLEEFH 286
>gi|323484786|ref|ZP_08090143.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323691859|ref|ZP_08106113.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|355627802|ref|ZP_09049433.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
gi|323401892|gb|EGA94233.1| hypothetical protein HMPREF9474_01894 [Clostridium symbiosum
WAL-14163]
gi|323504066|gb|EGB19874.1| signal recognition particle protein [Clostridium symbiosum
WAL-14673]
gi|354820127|gb|EHF04553.1| signal recognition particle protein [Clostridium sp. 7_3_54FAA]
Length = 454
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 153/290 (52%), Gaps = 41/290 (14%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--AMEEALVRILTPRRSIDILRDV 374
++F+++ GK L +AD++ LK +K L+ +V+ +++ + + D+L +
Sbjct: 10 LQNVFKNLTGKGRLSEADVKAGLKEVKMALLEADVSFKVVKQFINSVQEQAVGTDVLNGL 69
Query: 375 H------------------------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
H A K + V++ G+ G GK+T AK+A L
Sbjct: 70 HPGQMVIKIVNDELVKLMGSEMTEIALKPSNEITVIMMAGLQGAGKTTTTAKIAGKLKAK 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ ++AACD +R AVEQL+ + + VP+F G P +AK AI+ A++NG +VV+
Sbjct: 130 GRNPLLAACDVYRPAAVEQLQKNGEKQGVPVFSMGTGHKPVNIAKAAIEHASKNGHNVVI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDL--VLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
+DTAGR+ +E +M L ++ N D+ L V +A+ G DAV+ FN K+
Sbjct: 190 IDTAGRLHIDEDMMNELVEI--KENVDVYQTLLVVDAMTGQDAVNVAGMFNDKIG----- 242
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
IDG++LTK D D + GAALS+ V+G P+++VG G+ +DL++
Sbjct: 243 -----IDGVILTKMDG-DTRGGAALSIKAVTGKPIIYVGMGEKLSDLEQF 286
>gi|295397859|ref|ZP_06807922.1| cell division protein FtsY [Aerococcus viridans ATCC 11563]
gi|294973904|gb|EFG49668.1| cell division protein FtsY [Aerococcus viridans ATCC 11563]
Length = 341
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 120/213 (56%), Gaps = 17/213 (7%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P VV+FVGVNGVGK+T + K+AY L Q V++AA DTFR+GA+EQL ARR+ VPI
Sbjct: 135 PTVVLFVGVNGVGKTTTIGKMAYQLKQDGKKVLLAAGDTFRAGAIEQLEEWARRIDVPIV 194
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNP 496
+ DPA VA +A + A G D +LVDTAGR+Q LM L K+ + +P
Sbjct: 195 TGKAQGDPASVAFDAAKTAREGGYDYLLVDTAGRLQTKINLMNELDKMKRILTRELPGSP 254
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+L V +A G +A+ Q +F++ + IDGI+LTK D K G ++
Sbjct: 255 HEILLVLDATTGQNALVQAKEFDKTVD----------IDGIVLTKLDGT-AKGGVIFAIR 303
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
Y PV F+G G+ DL+ + + + L+K
Sbjct: 304 YEMDIPVKFIGLGEKVDDLQVFDAEKFIYQLIK 336
>gi|335040129|ref|ZP_08533265.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
gi|334179954|gb|EGL82583.1| signal recognition particle protein [Caldalkalibacillus thermarum
TA2.A1]
Length = 449
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
A QR P V++ VG+ G GK+T K+A +L + + ++ A D +R A++QL+ +
Sbjct: 95 AVSQRPPTVIMMVGLQGAGKTTTTGKLAKYLQKQNRNPLLVAADIYRPAAIKQLQVLGEQ 154
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F G ++ P ++AK+AI++A +D VL+DTAGR+ +E LM L+++ P
Sbjct: 155 INVPVFSLGDKESPVVIAKKAIEQAKEQHNDYVLIDTAGRLHIDETLMNELNQIKEEVRP 214
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G DAV+ FN++L I G++LTK D D + GAALS+
Sbjct: 215 DEILLVVDAMTGQDAVNVAQSFNEQLN----------ITGVILTKLDG-DTRGGAALSVK 263
Query: 557 YVSGAPVMFVGCGQSYTDLKKLN 579
V+G P+ FVG G+ L+ +
Sbjct: 264 AVTGQPIKFVGMGEKLDALEPFH 286
>gi|385813594|ref|YP_005849987.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
gi|323466313|gb|ADX70000.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
Length = 476
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 120/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP+F K EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + P
Sbjct: 156 LKVPVFSKDGEKDVAKIVQDGLAEADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|253573492|ref|ZP_04850835.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251847020|gb|EES75025.1| signal recognition particle protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 458
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 152/300 (50%), Gaps = 36/300 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRI---------- 361
T S+F + GK + + D+ A++ ++ L+ +V ++E + ++
Sbjct: 7 TSRLQSVFSKLRGKGKVSEDDVNEAMREVRLALLEADVNFKVVKEFIAKVKEKAVGKEVM 66
Query: 362 --LTPRRSI-DILR----------DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
TP I DI+ A+ R P VV+ G+ G GK+T AK+A LL
Sbjct: 67 DSFTPGMVIIDIVNKELTELMGGSQAKLARSNRPPTVVMMAGLQGAGKTTTSAKLAKLLL 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ A D +R A++QL+ +++VP+F P +A++A+Q A NG+D
Sbjct: 127 KENHRPLLVAGDIYRPAAIKQLQVLGEQIKVPVFTLPEGNSPVEIARQALQHAKDNGNDY 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VL+DTAGR+ +E LM L ++ + NPD VL V +A+ G DAV+ FNQ+L
Sbjct: 187 VLIDTAGRLHVDEELMEELRQIHEVTNPDEVLLVVDAMTGQDAVNVAESFNQQLT----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALS+ V+G P+ F G+ L+ + + + +L
Sbjct: 242 -----LTGVVLTKLDG-DTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRIL 295
>gi|384107750|ref|ZP_10008648.1| signal recognition particle protein [Treponema sp. JC4]
gi|383870606|gb|EID86208.1| signal recognition particle protein [Treponema sp. JC4]
Length = 477
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 40/304 (13%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA---- 357
K +G FSS+ ++++GK+ + + ++E ++ +K L+ +V + +EEA
Sbjct: 4 KLSGAFSSVVKTLSGKSTITEKNIEDTVEQIKMALLEADVNLRVVRRFVNSTIEEAKGEK 63
Query: 358 ----------LVRILTPRRSIDILRDVHAAKEQRKP---YVVVFVGVNGVGKSTNLAKVA 404
V+I+ + + +L D + P V++ +G+ G GK+T K+A
Sbjct: 64 VLKAVDPGQQFVKIIYDK-IVAMLGDTKVDLHLKGPDTQSVILMLGLQGAGKTTAAHKLA 122
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
LL+ ++AACD R AVEQL ++ VP+F K KD AKEAI A RN
Sbjct: 123 AKLLKDGRKPLLAACDLVRPAAVEQLSQLGEKIGVPVF-KENSKDAVKNAKEAIDFARRN 181
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLAD 524
G+D +++DTAGR+Q +E +M L K+ + P VL V +A+ G +AV+ F+++L
Sbjct: 182 GNDTIIIDTAGRLQIDEEMMAELVKIKKVTGPVEVLLVADAMTGQNAVEIAKSFDEQLG- 240
Query: 525 LSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
+ G++LTKFD+ D + GAALS+ ++ P++FVG G+ D + + + I
Sbjct: 241 ---------LTGVILTKFDS-DARGGAALSLKTITDKPILFVGTGEKTEDFEVFHPERIA 290
Query: 585 KTLL 588
+L
Sbjct: 291 SRIL 294
>gi|206900972|ref|YP_002251247.1| signal recognition particle protein [Dictyoglomus thermophilum
H-6-12]
gi|206740075|gb|ACI19133.1| signal recognition particle protein [Dictyoglomus thermophilum
H-6-12]
Length = 436
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 151/288 (52%), Gaps = 38/288 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPAL--------------KALKDRLMTKNVAAMEEALV 359
T +F+ + GK L + D+E AL K +K+ L A++E ++
Sbjct: 6 TSRLQEVFKKLRGKGKLTEKDIEEALREVRQALLEADAHYKVVKELLNNVKAKALQEDVL 65
Query: 360 RILTPRRSI------DILRDVHAAKE-----QRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
+ +TP I ++L + K +KP +++ VG+ G GK+T AK+AY L
Sbjct: 66 KSVTPAEQIIRILYYELLNILGGEKADLNLGSKKPGIILVVGLQGSGKTTTCAKLAYKLA 125
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
Q + V++ DTFR A +QL+ A +++VP++ G K P + A++ A SDV
Sbjct: 126 QEQRRVLLVGADTFRPAAGKQLQILAEKIKVPVYVDG--KGPFEIIDGALEVAKEKLSDV 183
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
++VDT GR+ +E +M L++L NP +L V + + G DAV+ KFN+KL
Sbjct: 184 MIVDTTGRLHIDEEMMNELNELNKRYNPSEILLVVDGMTGQDAVNIAEKFNEKLP----- 238
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G++LTK D D + GAALS+ ++G P+ F+G G+ DL+
Sbjct: 239 -----LTGVILTKMDG-DARGGAALSVKAITGKPIKFIGVGEKIEDLE 280
>gi|429765776|ref|ZP_19298056.1| signal recognition particle protein [Clostridium celatum DSM 1785]
gi|429185629|gb|EKY26603.1| signal recognition particle protein [Clostridium celatum DSM 1785]
Length = 449
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 149/281 (53%), Gaps = 37/281 (13%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLM------------TKNVA--AMEEALVRILTPRR 366
F+ + GK L + D++ A++ +K L+ KNV+ + ++ LTP +
Sbjct: 14 FKKLRGKGKLGEKDIKEAMREVKLALLEADVNFKVVKTFVKNVSEKCVGSEVLESLTPAQ 73
Query: 367 SI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSV 414
+ + L D+ E + P V++ VG+ G GK+T K+A L + K
Sbjct: 74 QVIKIVNEELTDLMGGSESKINFSSVGPTVIMLVGLQGAGKTTMCGKLALQLRKDKNKKP 133
Query: 415 MMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTA 474
++ ACD +R A++QL +++ +P+F+KG + +P +AKE IQ A NG++VV++DTA
Sbjct: 134 LLVACDIYRPAAIKQLEVVGKQIDIPVFQKGDKINPVQIAKEGIQYARENGNNVVIIDTA 193
Query: 475 GRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLI 534
GR+ +E LM L + NP +L V +++ G DAV+ FN+ L I
Sbjct: 194 GRLHIDEELMTELKDVKAEVNPSEILLVVDSMTGQDAVNVAETFNEALD----------I 243
Query: 535 DGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
G++LTK D D + GAALS+ +++ PV F+G G+ D
Sbjct: 244 SGVILTKLDG-DTRGGAALSIRHMTQKPVKFIGVGEKMNDF 283
>gi|291563269|emb|CBL42085.1| signal recognition particle protein [butyrate-producing bacterium
SS3/4]
Length = 454
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 155/288 (53%), Gaps = 37/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
++F+++ GK L +AD++ ALK +K L+ +V+ A+ + ++ L
Sbjct: 10 LQNVFKNLRGKGRLTEADVKAALKEVKMALLEADVSFKVVKQFISSVQERAIGQDVLESL 69
Query: 363 TP-RRSIDILRDVH-----------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
TP + I I+ + A K Q + V++ +G+ G GK+T AK+A
Sbjct: 70 TPGQMVIKIVNEELVKLMGSETTEIALKPQNEITVIMMIGLQGAGKTTTTAKLAGKFKAK 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++AACD +R A++QL+ + ++ VP+F G ++P +AK A++ A + G ++V
Sbjct: 130 GRKPLLAACDVYRPAAIKQLQVNGEKVGVPVFTMGDNQNPVNIAKAAVEHARKEGMNLVF 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q +E +M L + D + V +A+ G DAV+ FN K+
Sbjct: 190 LDTAGRLQIDESMMDELVNIKEAVEIDQTILVVDAMTGQDAVNVAGSFNDKIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
+DG++LTK D D + GAALS+ V+G P+++VG G+ +DL++
Sbjct: 243 ---VDGVILTKLDG-DTRGGAALSIRAVTGKPILYVGMGEKLSDLEQF 286
>gi|315038606|ref|YP_004032174.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|385817872|ref|YP_005854262.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
gi|312276739|gb|ADQ59379.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|327183810|gb|AEA32257.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
Length = 476
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + NP
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEELERVKKVANP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|325957087|ref|YP_004292499.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
gi|325333652|gb|ADZ07560.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
Length = 476
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + NP
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEELERVKKVANP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|58337566|ref|YP_194151.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227904208|ref|ZP_04022013.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
gi|58254883|gb|AAV43120.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227868227|gb|EEJ75648.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
Length = 476
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP+F + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + +P
Sbjct: 156 LKVPVFSENGEKDVAKIVQDGLAEADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVADP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|218185265|gb|EEC67692.1| hypothetical protein OsI_35151 [Oryza sativa Indica Group]
Length = 557
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 11/206 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T AK+AY+L + S M+ A D +R A++QL +++ VP++
Sbjct: 175 PTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVY 234
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G E P+ +AK I+EA +DV++VDTAGR+Q ++ +M L ++ NP VL V
Sbjct: 235 SEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLV 294
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 295 VDAMTGQEAASLVSTFNVEIG----------ITGAILTKLDG-DSRGGAALSIKEVSGKP 343
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ FVG G+ DL+ + + +L
Sbjct: 344 IKFVGRGERMEDLEPFYPDRMAQRIL 369
>gi|115484239|ref|NP_001065781.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|62701662|gb|AAX92735.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
gi|108864005|gb|ABG22368.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113644485|dbj|BAF27626.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|215765043|dbj|BAG86740.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615534|gb|EEE51666.1| hypothetical protein OsJ_33002 [Oryza sativa Japonica Group]
Length = 557
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 11/206 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T AK+AY+L + S M+ A D +R A++QL +++ VP++
Sbjct: 175 PTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVY 234
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G E P+ +AK I+EA +DV++VDTAGR+Q ++ +M L ++ NP VL V
Sbjct: 235 SEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLV 294
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 295 VDAMTGQEAASLVSTFNVEIG----------ITGAILTKLDG-DSRGGAALSIKEVSGKP 343
Query: 563 VMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ FVG G+ DL+ + + +L
Sbjct: 344 IKFVGRGERMEDLEPFYPDRMAQRIL 369
>gi|433655070|ref|YP_007298778.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293259|gb|AGB19081.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 446
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 36/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
TG +F+ + GK L + D++ A+K +K L+ +V ++ + ++
Sbjct: 7 TGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVM 66
Query: 360 RILTPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + D L + +KE + P +++ VG+ G GK+T K+A +L
Sbjct: 67 ESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTIIMMVGLQGSGKTTTSGKLANYLK 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ ACD +R A++QL+ + VP+F G + P +AK A+ A N +V
Sbjct: 127 SKGKNPILVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTTPVDIAKGAVDFAKNNNYNV 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ +E LM L + NP+ +L V +A+ G D V+ FN+KL
Sbjct: 187 VIIDTAGRLHIDEELMDELKNIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLD----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
IDG++LTK D D + GAALS+ V+ P+ F+ G+ TD++
Sbjct: 242 -----IDGVILTKLDG-DTRGGAALSVKAVTHKPIKFIASGEKLTDIE 283
>gi|332981635|ref|YP_004463076.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
gi|332699313|gb|AEE96254.1| signal recognition particle subunit FFH/SRP54 (srp54) [Mahella
australiensis 50-1 BON]
Length = 438
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 166/301 (55%), Gaps = 39/301 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T S F+ + GK L ++D++ A++ ++ L+ +V A+ + ++
Sbjct: 2 TEKLQSAFKKLTGKGKLSESDVKEAMRDVRMALLEADVNYAVVKEFVNKVTEKAIGQGVL 61
Query: 360 RILTPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + + L ++ + + + P V++ VG+ G GK+T AK+A +L
Sbjct: 62 ESLTPGQQVIKIVNEQLIELMGSSQSKIKWASAPPTVIMMVGLQGSGKTTTSAKLAGYLA 121
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE-KGYEKDPAIVAKEAIQEATRNGSD 467
+ + ++ ACD +R AV+QL+ +++ +P+F +G +P ++++A++ A ++ +D
Sbjct: 122 KQGKNPLLVACDIYRPAAVKQLQIVGQKVNIPVFSLEGA--NPVAISQQALEYAKKHSND 179
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VV++DTAGR+ ++ +M+ L + +PD +L V +A+ G DAV+ FN++LA
Sbjct: 180 VVILDTAGRLHIDDEMMQELEDIKSSVHPDEILLVVDAMTGQDAVNVAKNFNERLA---- 235
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
IDG++LTK D D + GAALS+ V+G P+ FVG G+ DL+ + I +
Sbjct: 236 ------IDGVVLTKLDG-DTRGGAALSVKAVTGKPIKFVGMGEKLDDLEPFHPDRIASRI 288
Query: 588 L 588
L
Sbjct: 289 L 289
>gi|108864006|gb|ABG22369.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 482
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T AK+AY+L + S M+ A D +R A++QL +++ VP++
Sbjct: 100 PTVILLAGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVY 159
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G E P+ +AK I+EA +DV++VDTAGR+Q ++ +M L ++ NP VL V
Sbjct: 160 SEGTEAKPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLV 219
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 220 VDAMTGQEAASLVSTFNVEIG----------ITGAILTKLDG-DSRGGAALSIKEVSGKP 268
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ DL+
Sbjct: 269 IKFVGRGERMEDLE 282
>gi|212703525|ref|ZP_03311653.1| hypothetical protein DESPIG_01570 [Desulfovibrio piger ATCC 29098]
gi|212673025|gb|EEB33508.1| signal recognition particle protein [Desulfovibrio piger ATCC
29098]
Length = 502
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 158/299 (52%), Gaps = 40/299 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S +F+S +G+ L + +++ L+ ++ L+ +V + + L++ +
Sbjct: 9 LSGVFRSFSGRGQLTEENIQAGLREVRLALLEADVNFKVVKDFVENVRQKCLGQELIKGV 68
Query: 363 TPRRSIDILRDVHAAK-------------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+P + + ++ VH + ++P V++ VG+ G GK+T+ K+A L +
Sbjct: 69 SPAQQV--VKIVHEELVGLLGGETAGLNLQGQEPAVIMLVGLQGSGKTTSAGKIANLLRK 126
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
K+ + D +R A++QL A++L +P F + +P +A++A++ A + VV
Sbjct: 127 QKMRPYLVPADVYRPAAIDQLTVLAKQLDMPCFPSTVDMNPVDIARQAMEAAREQQATVV 186
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
L+DTAGR+ +EPLM+ L+ + NP +LFV +A+ G DAV FN++L
Sbjct: 187 LLDTAGRLHVDEPLMQELAAIKAAVNPQEILFVADAMTGQDAVTVAESFNERLG------ 240
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALS+ V+GAPV FVG G+ ++++ + I +L
Sbjct: 241 ----LTGVVLTKMDG-DARGGAALSIRAVTGAPVKFVGMGEKLSEMEIFHPDRIAGRIL 294
>gi|242084798|ref|XP_002442824.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
gi|241943517|gb|EES16662.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
Length = 559
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P +++ G+ GVGK+T AK+A++L + S M+ A D +R A++QL +++ VP++
Sbjct: 177 PTIILLAGLQGVGKTTVCAKLAFYLKKMGKSCMLVAADVYRPAAIDQLTILGKKVGVPVY 236
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G E P+ +AK ++EA N +DV++VDTAGR+Q ++ +M L ++ NP VL V
Sbjct: 237 SEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKSMMNELKEVKKAVNPTEVLLV 296
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 297 VDAMTGQEAAGLVSSFNDEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGKP 345
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ DL+
Sbjct: 346 IKFVGQGERIEDLE 359
>gi|304316926|ref|YP_003852071.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778428|gb|ADL68987.1| signal recognition particle protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 446
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 36/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
TG +F+ + GK L + D++ A+K +K L+ +V ++ + ++
Sbjct: 7 TGKLQDIFKKLRGKGKLSEKDVKEAMKEVKIALLEADVNFKVVKEFINTVTEKSLGQEVM 66
Query: 360 RILTPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + D L + +KE + P +++ VG+ G GK+T K+A +L
Sbjct: 67 ESLTPAQHVIKIVNDELTALMGSKESKINFSDKPPTIIMMVGLQGSGKTTTSGKLANYLK 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ ACD +R A++QL+ + VP+F G + P +AK A+ A N +V
Sbjct: 127 SKGKNPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTTPVDIAKGAVDFAKNNNYNV 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ +E LM L + NP+ +L V +A+ G D V+ FN+KL
Sbjct: 187 VIIDTAGRLHIDEELMDELKNIKDAVNPNEILLVVDAMTGQDVVNVAESFNEKLD----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
IDG++LTK D D + GAALS+ V+ P+ F+ G+ TD++
Sbjct: 242 -----IDGVILTKLDG-DTRGGAALSVKAVTHKPIKFIASGEKLTDIE 283
>gi|389778740|ref|ZP_10194257.1| signal recognition particle-docking protein FtsY [Rhodanobacter
spathiphylli B39]
gi|388436026|gb|EIL92910.1| signal recognition particle-docking protein FtsY [Rhodanobacter
spathiphylli B39]
Length = 379
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 135/245 (55%), Gaps = 26/245 (10%)
Query: 351 VAAMEEALVRILTP-RRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+AA+ ++LV +L P + +D+ RKP+VV+ VG+NG GK+T + K+A
Sbjct: 143 LAALRQSLVALLKPVAQPLDV--------AHRKPFVVLVVGINGAGKTTTIGKLARRWRD 194
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
+VM+AA DTFR+ AVEQL+T R QVP+ +G + D A V +A+Q A G+DV+
Sbjct: 195 EGRAVMLAAGDTFRAAAVEQLKTWGERNQVPVISQGQDADSASVIFDALQAARSRGADVL 254
Query: 470 LVDTAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
+ DTAGR+ LM L K+ + + P VL V + G +AV+Q+ +F Q +
Sbjct: 255 VADTAGRLHTQGGLMDELGKIARVLKKLDADAPHEVLMVIDGTTGQNAVNQVRQFRQIVG 314
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSI 583
+ G+++TK D K G ++ G P+ +VG G++ TDL+ + ++
Sbjct: 315 ----------VTGLVVTKLDGT-AKGGVVFALAREFGLPIRYVGLGETATDLRSFDAEAF 363
Query: 584 VKTLL 588
V LL
Sbjct: 364 VDGLL 368
>gi|333993133|ref|YP_004525746.1| signal recognition particle protein [Treponema azotonutricium
ZAS-9]
gi|333736117|gb|AEF82066.1| signal recognition particle protein [Treponema azotonutricium
ZAS-9]
Length = 449
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 166/303 (54%), Gaps = 37/303 (12%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA---- 357
K T S F+ ++GK+++ + +++ A++A+K L+ +V A +EEA
Sbjct: 4 KLTQKISDAFRFVSGKSSITEKNIDDAVEAIKMALLEADVNLRVVRRFVNATIEEAKGEK 63
Query: 358 LVRILTP-RRSIDILRD--VHAAKEQRKPYV---------VVFVGVNGVGKSTNLAKVAY 405
++R + P ++ I I+ D V + R+ V ++ +G+ G GK+T+ AK+A
Sbjct: 64 VLRSVDPGQQFIKIVHDKMVSFLGDARQDLVLKGPDTISAILMLGLQGSGKTTSSAKMAL 123
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
L + ++ ACD R AVEQL A ++ VP++++ D V K A+ A +N
Sbjct: 124 RLKKEGRKPLLIACDLVRPAAVEQLSVLAHQIDVPVYKEEGATDSVKVYKGALDWARKNL 183
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
D +++DT GR+Q +EP+M+ LS+L ++NPD +L V +A+ G AVD F++K+
Sbjct: 184 IDTLIIDTTGRLQIDEPMMQELSRLKEVSNPDELLLVADAMTGQSAVDIAKAFDEKIG-- 241
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
+ G++LTKFD+ D + GAALS+ ++G P+ FVG G+ D + + I
Sbjct: 242 --------LTGVVLTKFDS-DTRGGAALSLKTITGKPLKFVGVGEKPEDFEPFHPDRIAG 292
Query: 586 TLL 588
+L
Sbjct: 293 RIL 295
>gi|302768411|ref|XP_002967625.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
gi|300164363|gb|EFJ30972.1| hypothetical protein SELMODRAFT_169303 [Selaginella moellendorffii]
Length = 462
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T K+A ++ + S M+ A D +R A+EQL T ++++VP+F
Sbjct: 74 PTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIEQLITLGKQVEVPVF 133
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E G E P +AK ++EA G+DV++VDTAGR+Q + +M L ++ + NP+ VL V
Sbjct: 134 EAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELKQMKKVLNPNEVLLV 193
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G ++TK D D + GAALS+ VSG P
Sbjct: 194 VDAMTGQEAAALVSAFNLEVG----------ITGAIMTKVDG-DSRGGAALSVQEVSGKP 242
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ L+
Sbjct: 243 IKFVGEGEGMNALE 256
>gi|302761974|ref|XP_002964409.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
gi|300168138|gb|EFJ34742.1| hypothetical protein SELMODRAFT_81276 [Selaginella moellendorffii]
Length = 494
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T K+A ++ + S M+ A D +R A+EQL T ++++VP+F
Sbjct: 106 PTVILMAGLQGVGKTTACGKLALYMKKKGKSCMLVATDIYRPAAIEQLITLGKQVEVPVF 165
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E G E P +AK ++EA G+DV++VDTAGR+Q + +M L ++ + NP+ VL V
Sbjct: 166 EAGTELSPVEIAKRGLKEAKEKGTDVLIVDTAGRLQVDATMMDELKQMKKVLNPNEVLLV 225
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G ++TK D D + GAALS+ VSG P
Sbjct: 226 VDAMTGQEAAALVSAFNLEVG----------ITGAIMTKVDG-DSRGGAALSVREVSGKP 274
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ L+
Sbjct: 275 IKFVGEGEGMNALE 288
>gi|16082103|ref|NP_394537.1| signal recognition particle protein [Thermoplasma acidophilum DSM
1728]
gi|74543624|sp|Q9HJ93.1|FTSY_THEAC RecName: Full=Signal recognition particle receptor FtsY; Short=SRP
receptor
gi|10640391|emb|CAC12205.1| probable signal recognition particle protein [Thermoplasma
acidophilum]
Length = 288
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+KP+VV+F+G+NG GK+T + K A++L ++ SV++AA DTFR+GA+EQ+ R
Sbjct: 84 KKPFVVLFLGINGTGKTTTIGKFAHYLKRNGKSVVIAAADTFRAGAIEQISLIGREAGTE 143
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+ DP+ VA +AI+ A D VL+DTAGRM N+ L+ + K+ ++ PDL L
Sbjct: 144 VIRHDRGSDPSSVAFDAIEHARARNIDYVLIDTAGRMNTNKNLLDEMKKIKRVSKPDLTL 203
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V +A+ G D+V+Q F + + DG+++TK DT D + G+ LS+ +
Sbjct: 204 LVIDAVSGQDSVNQARMFEENVG----------YDGVIVTKLDT-DARGGSILSIYHDLK 252
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV+FV GQ D+ + V+ L+
Sbjct: 253 KPVLFVCTGQGLDDIMPFDRNWYVRKLI 280
>gi|403514808|ref|YP_006655628.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
gi|403080246|gb|AFR21824.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
Length = 476
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 120/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP+F + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + P
Sbjct: 156 LKVPVFSEDGEKDVAKIVQDGLAEADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|284928857|ref|YP_003421379.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
gi|284809316|gb|ADB95021.1| signal recognition particle subunit FFH/SRP54 (srp54)
[cyanobacterium UCYN-A]
Length = 494
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 122/200 (61%), Gaps = 11/200 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK + P V++ VG+ G GK+T AK+A++L + K S +M A D +R A++QL+T ++
Sbjct: 94 AKAESDPTVILMVGLQGTGKTTATAKLAHYLKKQKQSCLMVAADIYRPAAIDQLKTLGQQ 153
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
++VP+FE G +++P +A + + +A +DVV++DTAGR+Q ++ +M L+++ NP
Sbjct: 154 IEVPVFELGNQENPVNIALQGVNKAKEIEADVVIIDTAGRLQIDQGMMLELTQIKESINP 213
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
L V +A+ G +A + F++K+ I G +LTK D D + GAALS+
Sbjct: 214 HDTLLVVDAMTGQEAANLAQTFHEKIK----------ITGTILTKMDG-DTRGGAALSVR 262
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
VSG P+ FVG G+ L+
Sbjct: 263 KVSGQPIKFVGVGEKIEALQ 282
>gi|161507707|ref|YP_001577663.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260101393|ref|ZP_05751630.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|417008883|ref|ZP_11945704.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
gi|160348696|gb|ABX27370.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260084804|gb|EEW68924.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|328465660|gb|EGF36877.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
Length = 476
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 120/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP+F + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + P
Sbjct: 156 LKVPVFSEDGEKDVAKIVQDGLAEADKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|302389629|ref|YP_003825450.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
gi|302200257|gb|ADL07827.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosediminibacter oceani DSM 16646]
Length = 446
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 37/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T ++F+ + GK L +AD++ A++ +K L+ +V A+ + ++
Sbjct: 7 TQKLEAVFKKLRGKGKLSEADVKQAMREVKLALLEADVNYKVVKDFIQKVTERAVGQEVL 66
Query: 360 RILTPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + D L + KE R K VV+ VG+ G GK+T K+ +L
Sbjct: 67 ESLTPAQQVIKIVNDELTKLMGPKEARLNISPSKVNVVMMVGLQGSGKTTTSGKLGLYLS 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ A D +R A++QL+ ++ +P+F G E++P ++K A++ A+R+ +DV
Sbjct: 127 KKGKRPLLVAADIYRPAAIKQLQVVGEKIGLPVFTMG-EQNPVNISKAAVEYASRHNNDV 185
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ ++ LM+ L + NPD +L V +++ G DAV+ F+ KL
Sbjct: 186 VIIDTAGRLHVDDELMQELINIKDAVNPDEILLVVDSMTGQDAVNVAETFHNKLQ----- 240
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G++LTK D D + GAALS+ V+G P+ FVG G+ TDL+
Sbjct: 241 -----LTGLILTKLDG-DTRGGAALSIKAVTGCPIKFVGMGEKLTDLE 282
>gi|315425933|dbj|BAJ47583.1| signal recognition particle receptor [Candidatus Caldiarchaeum
subterraneum]
gi|343484717|dbj|BAJ50371.1| signal recognition particle receptor [Candidatus Caldiarchaeum
subterraneum]
Length = 302
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 161/287 (56%), Gaps = 26/287 (9%)
Query: 302 EVGKHNKPDAKKTGWFSSMF--QSIAGKANLDKADLEPALKALKDRLMTKNV-------A 352
E K KP K+ S F Q + ++ AD + +L+ L+ +V A
Sbjct: 14 ETVKTAKPSPKEVENVLSDFYLQLVEADVAVETAD--AIVNSLRHTLLEMDVPRFGDREA 71
Query: 353 AMEEALVRILTPRRSID----ILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
++EAL + + P + +L+ V A++Q +P V++FVG NG GK+T + K+A++L
Sbjct: 72 VLKEALKKAIEPLIKVADVNLVLKRVDEARKQGRPAVILFVGPNGSGKTTTVVKLAHYLR 131
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ SV++A+ DTFR+GA+EQL T +R + + Y DPA VA +A+ +A+ +V
Sbjct: 132 KRGYSVILASADTFRAGAIEQLETLGQRAGFMVVSQSYGADPAAVAVDALNKASSMRVNV 191
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
VL+DTAGR + + L+ + KL + PD V++ G+AL GN AV Q F++ +
Sbjct: 192 VLIDTAGRTELDRGLLEEMRKLKRVVKPDFVIYTGDALAGNAAVQQAKMFDEVVG----- 246
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
ID ++L+K D D K G+A+S+ + +G P++F+G GQ DL
Sbjct: 247 -----IDYVILSKVDA-DAKGGSAISISHSTGKPLLFLGVGQELDDL 287
>gi|302392419|ref|YP_003828239.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
gi|302204496|gb|ADL13174.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Acetohalobium arabaticum DSM 5501]
Length = 453
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 148/293 (50%), Gaps = 36/293 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
F + GK L + D++ AL+ +K L+ +V A+ + ++ LTP +
Sbjct: 14 FDKLRGKGKLSEKDVKSALREVKLALLEADVNFKVVKNFISDIEERAVGKEVMDSLTPAQ 73
Query: 367 SI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ + L D+ + + P V++ VG+ G GK+T + K+A L ++ +
Sbjct: 74 QVIKIVNEELTDLMGGTQSKLSIASDPPTVIMLVGLQGAGKTTTVGKLAKHLHKNGRRPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ A D +R A++QL+ RL P+F G ++DP +AK + A NG DVV++DTAG
Sbjct: 134 LVAGDVYRPAAIKQLQVLGERLDQPVFSMGDKQDPVDIAKAGVSHAESNGRDVVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM L + NP +L V +A+ G DAV+ F+ L +D
Sbjct: 194 RLHIDEELMGELKDIKAAVNPQEILLVVDAMTGQDAVNVAESFDDALG----------VD 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GI LTK D D + GAALS+ V+G P+ FVG G+ DL+ + + +L
Sbjct: 244 GITLTKLDG-DARGGAALSIRKVTGRPIKFVGTGEKLDDLEPFHPDRMASRIL 295
>gi|283798055|ref|ZP_06347208.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|291074194|gb|EFE11558.1| signal recognition particle protein [Clostridium sp. M62/1]
gi|295091808|emb|CBK77915.1| signal recognition particle protein [Clostridium cf.
saccharolyticum K10]
Length = 452
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 154/288 (53%), Gaps = 37/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
++F+++ GK L +AD++ L+ +K L+ +V+ A+ + ++ L
Sbjct: 10 LQNVFKNLTGKGRLSEADVKAGLREVKMALLEADVSFKVVKQFINSVQERAVGQDVLNGL 69
Query: 363 TP-RRSIDILRDVH-----------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
P + I I+ + A + + V++ G+ G GK+T AK+A L
Sbjct: 70 NPGQMVIKIVNEELVKLMGSEMTEIALRPANEITVILMAGLQGAGKTTTTAKIAGKLKAK 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
S ++AACD +R A+EQL+ + + VP+F G P +AK AI+ A +NG++VV+
Sbjct: 130 GRSPLLAACDIYRPAAIEQLKINGEKQGVPVFSMGTGHKPVNIAKAAIEHAAKNGNNVVI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +E +M L ++ + D L + +A+ G DAV+ FN K+
Sbjct: 190 LDTAGRLHIDEDMMNELVEIKENVSVDQTLLIVDAMTGQDAVNVAGMFNDKIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
IDG++LTK D D + GAALS+ V+G P+++VG G+ +DL++
Sbjct: 243 ---IDGVILTKMDG-DTRGGAALSIKAVTGKPILYVGMGEKLSDLEQF 286
>gi|410658780|ref|YP_006911151.1| Signal recognition particle, subunit Ffh SRP54 [Dehalobacter sp.
DCA]
gi|410661769|ref|YP_006914140.1| Signal recognition particle, subunit Ffh SRP54 [Dehalobacter sp.
CF]
gi|409021135|gb|AFV03166.1| Signal recognition particle, subunit Ffh SRP54 [Dehalobacter sp.
DCA]
gi|409024125|gb|AFV06155.1| Signal recognition particle, subunit Ffh SRP54 [Dehalobacter sp.
CF]
Length = 462
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 158/297 (53%), Gaps = 37/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRI------------L 362
+ F+ + GK L +AD+ AL+ ++ L+ +V ++E + RI L
Sbjct: 11 LQATFKRLRGKGKLTEADVTEALREVRIALLEADVNFKVVKELIARIKERSVGQEVLESL 70
Query: 363 TPRRSI------DILR-----DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP + + +I+R + + + P +++ VG+ G GK+T+ AK+A L +
Sbjct: 71 TPGQHVIKIVHEEIIRLMGGSESKISISSKPPTIIMLVGLQGAGKTTHGAKLASMLKKQG 130
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++ ACD +R A++QL +++VP+F G E +P +A E++ A +NG+DVV++
Sbjct: 131 KNPLLVACDIYRPAAIKQLEVLGEQIKVPVFSLGQE-NPVKIASESLVFARKNGNDVVII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ NE LM LSK+ P +L V +A+ G DAV+ F+Q+L
Sbjct: 190 DTAGRLHINEELMDELSKIKGNVRPHEILLVVDAMTGQDAVNAADAFHQQLG-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+DG++L+K D D + GAALS+ V+G + F G G+ L+ + I +L
Sbjct: 242 --LDGVILSKLDG-DTRGGAALSVKAVTGCSIKFAGTGEKMDALEVFHPDRIASRIL 295
>gi|167769126|ref|ZP_02441179.1| hypothetical protein ANACOL_00449 [Anaerotruncus colihominis DSM
17241]
gi|167668766|gb|EDS12896.1| signal recognition particle protein [Anaerotruncus colihominis DSM
17241]
Length = 459
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 155/288 (53%), Gaps = 37/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEAL----V 359
+G S++F+ + K L ++D++ A++ ++ L+ +V A E+A+ +
Sbjct: 7 SGKLSAVFKKMRNKGKLKESDIKEAMREVRLALLEADVNYKVAKDFVAAVTEKAVGDEVL 66
Query: 360 RILTPRRSI-----DILRDVHAAK------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
LTP + + D L ++ R P +V+ G+ G GK+T+ AK+A
Sbjct: 67 ESLTPAQMVVKIVNDELTNLMGETGARLNFSSRPPTIVMMCGLQGSGKTTHSAKLALHFR 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
+ ++ ACD +R A+EQL+ + VP+F+ G + DP +A+ A+ A +G+D+
Sbjct: 127 EQGKRPLLVACDVYRPAAIEQLKVVGEKAGVPVFDMG-QGDPVEIARRAVMHAKDHGNDL 185
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ +E LM L ++ +P +L V +A+VG DAV+ S F++ L
Sbjct: 186 VILDTAGRLHIDEALMDELKRIRDEVSPQEILLVVDAMVGQDAVNVASAFDEALG----- 240
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+G PV FVG G+ DL+
Sbjct: 241 -----ISGVILTKLDG-DTRGGAALSVRAVTGKPVKFVGTGEKLGDLE 282
>gi|259046590|ref|ZP_05736991.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
gi|259036755|gb|EEW38010.1| signal recognition particle protein [Granulicatella adiacens ATCC
49175]
Length = 478
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 12/199 (6%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRL 437
E + P VV+ VG+ G GK+T K+A ++ +H K ++ A D +R A++QL+T ++L
Sbjct: 97 EAKPPTVVMMVGLQGAGKTTTAGKLASFMAKHEKKRPLLVAADVYRPAAIDQLQTLGKQL 156
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
P+F G + P +AK+AI++A +G D+V++DTAGR+ +E LM L + + NP
Sbjct: 157 NFPVFSLGNQVSPVEIAKQAIEKAKIDGRDLVIIDTAGRLHIDETLMEELQNIKAVANPS 216
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+L V +++ G DAV+ FN++L I G++LTK D D + GAALS+
Sbjct: 217 EILLVVDSMTGQDAVNVAQTFNERLD----------ITGVILTKLDG-DTRGGAALSIRS 265
Query: 558 VSGAPVMFVGCGQSYTDLK 576
V+G P+ F G G+ D +
Sbjct: 266 VTGKPIKFTGRGEKLEDFE 284
>gi|440756742|ref|ZP_20935942.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
gi|440172771|gb|ELP52255.1| signal recognition particle protein [Microcystis aeruginosa
TAIHU98]
Length = 478
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ NPD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVNPDDTLLVVDAMTGQEAANLTHTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|226501792|ref|NP_001142003.1| uncharacterized protein LOC100274153 [Zea mays]
gi|194706754|gb|ACF87461.1| unknown [Zea mays]
gi|413916134|gb|AFW56066.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 556
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P +++ G+ GVGK+T AK+A++L + S M+ A D +R A++QL +++ VP++
Sbjct: 174 PTIILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGKKVGVPVY 233
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G E P+ +AK ++EA N +DV++VDTAGR+Q ++ +M L ++ NP VL V
Sbjct: 234 SEGTEAKPSQIAKNGLKEAKVNKADVIIVDTAGRLQVDKAMMNELKEVKKAVNPTEVLLV 293
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A +S FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 294 VDAMTGQEAAGLVSSFNDEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGKP 342
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ DL+
Sbjct: 343 IKFVGQGERIEDLE 356
>gi|403745347|ref|ZP_10954285.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121575|gb|EJY55868.1| signal recognition particle protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 467
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P VV+ VG+ G GK+T +AK+ QH+ ++ A D +R A++QL+ +++ +P
Sbjct: 77 KPPTVVMLVGLQGAGKTTAIAKLGLAFRQHQHRPLLVAADVYRPAAIDQLKVLGKQIDIP 136
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F++G + +P +AK ++ EA + G+D+VL+DTAGR+ ++ LM L + P +L
Sbjct: 137 VFDQGADANPVAIAKASLAEAEKAGADIVLIDTAGRLHIDDQLMEELEGMKAAVQPTEIL 196
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V +A+ G DAV F+Q+L + G++LTK D D + GAAL++ V+G
Sbjct: 197 LVVDAMTGQDAVHVAETFHQRLG----------VTGVILTKLDG-DARGGAALTVRAVTG 245
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+ +VG G+ L+ + + +L
Sbjct: 246 CPIKYVGLGEKIEPLEPFHPDRLASRIL 273
>gi|425437780|ref|ZP_18818194.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|425462607|ref|ZP_18842080.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
gi|389677199|emb|CCH93837.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9432]
gi|389824313|emb|CCI26812.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9808]
Length = 478
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ NPD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVNPDDTLLVVDAMTGQEAANLTHTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|317055139|ref|YP_004103606.1| signal recognition particle protein [Ruminococcus albus 7]
gi|315447408|gb|ADU20972.1| signal recognition particle protein [Ruminococcus albus 7]
Length = 458
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 161/297 (54%), Gaps = 37/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
+F+ + G+ L +AD++ A+K +K L+ +V+ ++ E +++ L
Sbjct: 10 LGGVFKKLKGRGKLTEADVKEAMKEVKMALLEADVSYKVVKDFVANVTERSVGEDVLKSL 69
Query: 363 TPRRSI------DILRDVHAAKEQ-----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP + + ++++ + A + + P V++ G+ G GK+T+ AK+A +
Sbjct: 70 TPAQQVIKIVNEELVKLMGEANSKINFPSKPPCVIMMCGLQGSGKTTHAAKLAKMFKRQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R A++QL+ A + QVP+FE G + DP + KE +++A G+D+V++
Sbjct: 130 SRPLLIAADVYRPAAIDQLKIVAEKAQVPVFEMG-QIDPRKIVKEGLKQAKDYGNDMVII 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + + P ++ V +A++G DAV S F++ L
Sbjct: 189 DTAGRLHIDEELMDELKDIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALG-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ID ++LTK D+ D + GAALS++ V+G P+ FVG G+ + + + + + +L
Sbjct: 241 --IDSVILTKLDS-DTRGGAALSVLAVTGKPIKFVGMGEKLDEFEPFHPERMASRIL 294
>gi|425447198|ref|ZP_18827189.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
gi|389732320|emb|CCI03740.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9443]
Length = 478
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ NPD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVNPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|365840280|ref|ZP_09381478.1| signal recognition particle protein [Anaeroglobus geminatus F0357]
gi|364561856|gb|EHM39732.1| signal recognition particle protein [Anaeroglobus geminatus F0357]
Length = 449
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 36/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------------AAMEEALVRI 361
F + F+ + GK L + D+ ALK ++ L+ +V A EE +
Sbjct: 10 FQAAFRKLRGKGKLTEEDVSEALKEMRRALLEADVNFAVTKDFIKKVGEKAVGEEVFSSL 69
Query: 362 LTPRRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+ I I+RD + R P +V+ G+ G GK+T AK+A ++
Sbjct: 70 NASQTVIKIVRDELTELLGGTQSRISVSSRPPTIVMLAGLQGAGKTTTAAKLAKAFVRRG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++AACD +R AVEQL+ R L VP++ + KD +A+ ++ AT + DVV++
Sbjct: 130 KRPLLAACDVYRPAAVEQLQVLGRELNVPVYAEEGGKDAVAIAENSVPYATSHLCDVVII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L ++ +P +L V +A+ G DAV + F++ L
Sbjct: 190 DTAGRLHIDEALMDELVRIKNKVHPHEILLVVDAMTGQDAVTAATAFDKALG-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
IDG+++TK D D + GAALS+ V+G P+ F+G + L++ +
Sbjct: 242 --IDGLIMTKLDG-DARGGAALSIKAVTGKPIKFIGVSEKMDGLEEFH 286
>gi|358064086|ref|ZP_09150675.1| signal recognition particle protein [Clostridium hathewayi
WAL-18680]
gi|356697719|gb|EHI59290.1| signal recognition particle protein [Clostridium hathewayi
WAL-18680]
Length = 451
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 154/290 (53%), Gaps = 41/290 (14%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
++F+++ GK L +AD++ ALK +K L+ +V+ A+ + ++ L
Sbjct: 10 LQNVFKNLRGKGRLSEADVKAALKEVKMALLEADVSFKVVKQFINSVQERAIGQDVLNSL 69
Query: 363 TPRRSIDILRDVH--------------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
TP + + ++ VH A + + V++ G+ G GK+T AK+A L
Sbjct: 70 TPGQMV--IKIVHEELINLMGSETTEIALRPSNEITVIMMAGLQGAGKTTTTAKIAGKLK 127
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
++AACD +R A++QL+ + + V +F G + P +AK AI+ A +NG +V
Sbjct: 128 AKGRKPLLAACDVYRPAAIQQLQINGEKQGVAVFSMGDSQKPVNIAKAAIEHAGKNGYNV 187
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V++DTAGR+ +E +M L ++ D L + +A+ G DAV+ FN K+
Sbjct: 188 VILDTAGRLHIDEDMMGELIEIKEAITVDQTLLIVDAMTGQDAVNVAEMFNSKIG----- 242
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
IDG++LTK D D + GAALS+ V+G P++++G G+ +DL++
Sbjct: 243 -----IDGVILTKLDG-DTRGGAALSIRAVTGRPILYIGMGEKLSDLEQF 286
>gi|423318442|ref|ZP_17296319.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
gi|423321926|ref|ZP_17299797.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405591380|gb|EKB64882.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405595567|gb|EKB68947.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
Length = 476
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + +P
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEELERVKKVTHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|443656730|ref|ZP_21131781.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
gi|159027605|emb|CAO86977.1| ffh [Microcystis aeruginosa PCC 7806]
gi|443333355|gb|ELS47919.1| signal recognition particle protein [Microcystis aeruginosa
DIANCHI905]
Length = 478
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGQQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ NPD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVNPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|256843368|ref|ZP_05548856.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256849811|ref|ZP_05555242.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|262046944|ref|ZP_06019904.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|293381186|ref|ZP_06627194.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
gi|256614788|gb|EEU19989.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256713300|gb|EEU28290.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|260572926|gb|EEX29486.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|290922226|gb|EFD99220.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
Length = 476
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + +P
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEELERVKKVTHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|227878849|ref|ZP_03996756.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
gi|227861597|gb|EEJ69209.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
Length = 476
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + +P
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L I G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------ITGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|425454517|ref|ZP_18834254.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
gi|389804798|emb|CCI15909.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9807]
Length = 478
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L ++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELGQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ NPD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVNPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|383786582|ref|YP_005471151.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Fervidobacterium pennivorans DSM 9078]
gi|383109429|gb|AFG35032.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Fervidobacterium pennivorans DSM 9078]
Length = 434
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 152/282 (53%), Gaps = 35/282 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S+ F+ ++GK + + ++E A++ +K L+ +V A+ E +++ L
Sbjct: 9 LSNAFKLLSGKGKITEKNIEEAIQIVKTSLLAADVNYKVVKEFVENVKKRALGEEVLKSL 68
Query: 363 TP-RRSIDILRD----VHAAKEQRK----PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
TP + I I+RD + KE + P V+ VG+ G GK+T+ AK+A +L +
Sbjct: 69 TPDQMFIKIVRDELIKLLGEKEPFRLVHHPSYVMMVGLQGTGKTTSAAKIANYLKKQGKH 128
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++ A DT+R A++QL T +++ VP+ G K+ + +EAI+ +G DVV++DT
Sbjct: 129 PILVAADTYRPAAIDQLETLGKKIGVPVI-TGDRKNALKIVEEAIKTVKDSGYDVVILDT 187
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ ++ +M L K+ + NPD +L +A+ G DAV+ FN++L
Sbjct: 188 AGRLHIDDEMMEELEKIKEMVNPDEILLTVDAMAGQDAVNSAKVFNERLN---------- 237
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
I G ++TK D D + G L++ Y++G PV FVG G+ D
Sbjct: 238 ITGFVITKLDG-DSRGGVILTIRYITGKPVKFVGVGEKIDDF 278
>gi|374622675|ref|ZP_09695197.1| signal recognition particle-docking protein FtsY
[Ectothiorhodospira sp. PHS-1]
gi|373941798|gb|EHQ52343.1| signal recognition particle-docking protein FtsY
[Ectothiorhodospira sp. PHS-1]
Length = 473
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 137/255 (53%), Gaps = 25/255 (9%)
Query: 347 MTKNVAAME----EALVRILTPRRSIDILRDVH---AAKEQRKPYVVVFVGVNGVGKSTN 399
+T+ VA E EALV+ L +D+L+ V A +KPYV++ +G+NG GK+T
Sbjct: 227 LTRRVARKELKDAEALVKALE-GAMVDVLKPVQKPLAIDAGKKPYVILVLGINGAGKTTT 285
Query: 400 LAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQ 459
+ K+ + L + SVM+AA DTFR+ AVEQL+T R Q P+ +G D A V +A Q
Sbjct: 286 IGKLTHHLRRQGKSVMLAAGDTFRAAAVEQLQTWGERNQAPVIAQGQGADSASVIFDAWQ 345
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSK---LIYLNNPDL---VLFVGEALVGNDAVD 513
A G DV++ DTAGR+ LM L K +I PD VL V +A G +A++
Sbjct: 346 AAKARGMDVLIADTAGRLHTQSNLMDELKKVKRVIQRQAPDAPHEVLLVVDAGTGQNALN 405
Query: 514 QLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
Q +F+Q + DL+ GI +TK D K G ++ G PV F+G G+
Sbjct: 406 QAREFHQAM-DLT---------GIAVTKLDGT-AKGGILFAIAERVGVPVRFIGVGEKIE 454
Query: 574 DLKKLNVKSIVKTLL 588
DL++ N + + LL
Sbjct: 455 DLREFNAEDFARALL 469
>gi|315121876|ref|YP_004062365.1| signal recognition particle protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495278|gb|ADR51877.1| signal recognition particle protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 461
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 148/301 (49%), Gaps = 43/301 (14%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA-----AMEEALVRILTPRRSIDIL 371
S+FQ I G+ NL + D+ L+ ++ + +V+ A+ E RI + IL
Sbjct: 9 LGSVFQKITGRGNLSETDISKTLREIRRTFLEADVSLEVVQALNE---RIQEKAKGAKIL 65
Query: 372 RDVHAAKEQRK-----------------------PYVVVFVGVNGVGKSTNLAKVAYWLL 408
+ + + K P V++ VG+ G GK+T AK+AY L
Sbjct: 66 KSIQPGQMVVKIVHDELIEVLGTENVGLDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLK 125
Query: 409 QHKVSVMM-AACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
K M+ A+ D R A EQLR ++QV E ++ PA +A AIQ A G D
Sbjct: 126 TLKKKKMLMASLDIHRPAAQEQLRYLGEKIQVDTLEVVPKQLPAEIATRAIQNARDRGYD 185
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VV++DTAGR NE LM+ +S++ L NP +L V +AL G DAV F++K+
Sbjct: 186 VVILDTAGRNHINESLMQEISEVKSLTNPHEILLVADALTGQDAVHLARNFDEKIG---- 241
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
+ GI+LT+ D D + GAALSM +V+G P+ +G G+ DL+ +V +
Sbjct: 242 ------LTGIILTRMDG-DGRGGAALSMRFVTGKPIKAIGTGEKIDDLENFFPDRVVNRI 294
Query: 588 L 588
L
Sbjct: 295 L 295
>gi|389690732|ref|ZP_10179625.1| signal recognition particle-docking protein FtsY [Microvirga sp.
WSM3557]
gi|388588975|gb|EIM29264.1| signal recognition particle-docking protein FtsY [Microvirga sp.
WSM3557]
Length = 446
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 17/213 (7%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
RKP+VV+ VGVNG GK+T + K++ + + VM+AA DTFR+ A+EQL+ R+ P
Sbjct: 238 RKPFVVLMVGVNGAGKTTTIGKLSQKFREQGLKVMLAAGDTFRAAAIEQLKVWGERVGAP 297
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------N 494
+ + D A +A +A+QEA NG+DV+L+DTAGR+Q+ LM L K++ +
Sbjct: 298 VLARAQGADAAGLAYDALQEAKANGTDVLLIDTAGRLQNKAGLMAELEKIVRVVKKFDPT 357
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
P L V +A VG +AV Q+ F QK A ++ G+++TK D + G ++
Sbjct: 358 APHATLLVLDATVGQNAVSQVELF-QKAAGVT---------GLIMTKLDGT-ARGGILVA 406
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
+ G PV F+G G+ DL+ + K +
Sbjct: 407 LAAKFGLPVHFIGVGEGVEDLEPFTARDFAKAI 439
>gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans
SSM1]
Length = 447
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 149/281 (53%), Gaps = 38/281 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+++F+ I G+A + + +++ A+K ++ L+ +V A+ E +++ L
Sbjct: 9 LNAVFKKIKGQAKITEDNIKDAVKQVRLALLEADVNYKVVKKFISAVQEKALGEEVLKSL 68
Query: 363 TPRRSI-----DILRDVHAAKEQRK--------PYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
TP + D L +V +Q P ++ VG+ G GK+T K+A + +
Sbjct: 69 TPDQVFIKIVHDELVNVLGGDDQSTKIKLNPIPPTKIMLVGLQGSGKTTTAGKLAKYFQK 128
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
+ V++ A D +R A++QL ++L+V +F K E+D +AKEA+Q A DVV
Sbjct: 129 NGKDVLLVADDIYRPAAIDQLEILGKQLKVDVFSKRDEQDAVKIAKEAVQHAKSAAKDVV 188
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++DTAGR+ +E LM L + NPD +LFV +A+ G DAV+ FN+ L
Sbjct: 189 IIDTAGRLHIDETLMEELKNIKEAINPDEILFVADAMTGQDAVNVAKTFNEMLD------ 242
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
I G++LTK D D + GAALS+ V+G P+ FVG G+
Sbjct: 243 ----ITGVILTKLDG-DARGGAALSIREVTGKPLKFVGTGE 278
>gi|218245446|ref|YP_002370817.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
gi|218165924|gb|ACK64661.1| signal recognition particle protein [Cyanothece sp. PCC 8801]
Length = 492
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A P V++ G+ G GK+T AK+A +L + K S +M A D +R A++QL T
Sbjct: 90 NVPLATTATAPTVILMAGLQGTGKTTATAKLALYLRKQKRSCLMVATDIYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++++VP+FE G E +P +A++ +++A G D VL+DTAGR+Q +E +M L+++
Sbjct: 150 LGQQIEVPVFELGSEANPVDIARQGVEKAKELGVDTVLIDTAGRLQIDESMMVELARIKE 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
PD L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 AVKPDDTLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKMDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ F+G G+ L+
Sbjct: 259 LSVRQISGQPIKFIGVGEKVEALQ 282
>gi|257058483|ref|YP_003136371.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
gi|256588649|gb|ACU99535.1| signal recognition particle protein [Cyanothece sp. PCC 8802]
Length = 492
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A P V++ G+ G GK+T AK+A +L + K S +M A D +R A++QL T
Sbjct: 90 NVPLATTATAPTVILMAGLQGTGKTTATAKLALYLRKQKRSCLMVATDIYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++++VP+FE G E +P +A++ +++A G D VL+DTAGR+Q +E +M L+++
Sbjct: 150 LGQQIEVPVFELGSEANPVDIARQGVEKAKELGVDTVLIDTAGRLQIDESMMVELARIKE 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
PD L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 AVKPDDTLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKMDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ F+G G+ L+
Sbjct: 259 LSVRQISGQPIKFIGVGEKVEALQ 282
>gi|295693164|ref|YP_003601774.1| signal recognition particle protein ffh [Lactobacillus crispatus
ST1]
gi|295031270|emb|CBL50749.1| Signal recognition particle protein Ffh [Lactobacillus crispatus
ST1]
Length = 476
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + +P
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEAEKNKNDYVLIDTAGRLEIDEPLMEELERVKKVAHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|295425198|ref|ZP_06817901.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
gi|295064974|gb|EFG55879.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
Length = 476
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 121/200 (60%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D V++DTAGR++ +EPLM L ++ + P
Sbjct: 156 LKVPVYSEADEKDVAKIVQDGLAEADKNKNDYVIIDTAGRLEIDEPLMEELERIKKVAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+G P+++ G G+ TDL+
Sbjct: 265 AVTGKPIIYTGQGEKLTDLE 284
>gi|374633612|ref|ZP_09705977.1| signal recognition particle-docking protein FtsY [Metallosphaera
yellowstonensis MK1]
gi|373523400|gb|EHP68320.1| signal recognition particle-docking protein FtsY [Metallosphaera
yellowstonensis MK1]
Length = 258
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 147/259 (56%), Gaps = 20/259 (7%)
Query: 339 LKALKDRLMTKNVAAME--EALVRILTPRRSIDILRD-------VHAAKEQRKPYVVVFV 389
L+ LK L+ + V+ E E+LV+ R +IL+ + ++ KP++++F
Sbjct: 10 LEDLKRELIGRRVSRREDLESLVKNSLKRSLREILKKNYNETDLIRLIRDSNKPFIIIFF 69
Query: 390 GVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKD 449
GVNGVGK+T +AK A+ L ++ SV++AA DTFR+ A EQL HA +L VP+ + Y D
Sbjct: 70 GVNGVGKTTTIAKFAWMLKRNGFSVIIAAADTFRAAAQEQLALHASKLDVPLVKGKYGGD 129
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
PA VA +AIQ A DVVL+DTAGRM ++ L L +++ + P++ + V ++L G
Sbjct: 130 PASVAYDAIQSAKSRRVDVVLIDTAGRMHTDKNLTEELKRVVKVAKPNMKILVLDSLAGQ 189
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
DA++Q + F + + D ++LTK D D K G LS+ Y PV +VG G
Sbjct: 190 DALEQATYFEKIVG----------YDMVILTKVDA-DSKGGIVLSLAYKLNKPVGYVGIG 238
Query: 570 QSYTDLKKLNVKSIVKTLL 588
Q Y L K + + + LL
Sbjct: 239 QDYESLVKFDPEWFAERLL 257
>gi|336053926|ref|YP_004562213.1| signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
gi|333957303|gb|AEG40111.1| Signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
Length = 476
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 120/199 (60%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P +++ VG+ G GK+T + K+AY L + K ++ A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDK 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L+VP++ + EKD A + ++ + EA +N +D VL+DTAGR++ +EPLM L ++ + P
Sbjct: 156 LKVPVYSEDGEKDVAKIVQDGLAEADKNKNDYVLIDTAGRLEIDEPLMEELERVKQVAEP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 216 DNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P++F G G+ +DL
Sbjct: 265 AVTGKPILFTGQGEKLSDL 283
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 150/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+ + GK L + D++ A++ +K L+ +V A+ + ++ L
Sbjct: 10 LQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL 69
Query: 363 TP-RRSIDILRD----VHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D + + + R P V++ VG+ G GK+T K+A L +
Sbjct: 70 TPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++ ACD R A++QL+ + VP+F G + +P +AK +I A + SDV+++
Sbjct: 130 KNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + PD +L V +A+ G DAV+ S FN++L
Sbjct: 190 DTAGRLHIDEELMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLD-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+ P+ +VG G+ TDL+
Sbjct: 242 --ITGVILTKLDG-DTRGGAALSIKAVTQKPIKYVGTGEKLTDLE 283
>gi|16330898|ref|NP_441626.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|383322640|ref|YP_005383493.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325809|ref|YP_005386662.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491693|ref|YP_005409369.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436960|ref|YP_005651684.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|451815056|ref|YP_007451508.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|2500885|sp|P74214.1|SRP54_SYNY3 RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|1653392|dbj|BAA18306.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|339273992|dbj|BAK50479.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
gi|359271959|dbj|BAL29478.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275129|dbj|BAL32647.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278299|dbj|BAL35816.1| signal recognition particle protein [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961740|dbj|BAM54980.1| signal recognition particle protein [Bacillus subtilis BEST7613]
gi|451781025|gb|AGF51994.1| signal recognition particle protein [Synechocystis sp. PCC 6803]
Length = 482
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 122/204 (59%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ ++ P V++ G+ G GK+T AK+A +L + K S +M A D +R A++QL+T
Sbjct: 90 NVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLRKQKRSALMVATDVYRPAAIDQLKT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+F+ G + +P +A++ +++A G D VL+DTAGR+Q + +M L+++
Sbjct: 150 LGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELAEIKQ 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 VVKPDDTLLVVDAMTGQEAANLTHTFHEQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALQ 282
>gi|315924205|ref|ZP_07920431.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622607|gb|EFV02562.1| signal recognition particle protein [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 449
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 156/289 (53%), Gaps = 37/289 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLM------------TKNVA--AMEEALVRIL 362
F +F + K LD+AD++ A + +K L+ TK V+ A E +++ L
Sbjct: 11 FQDIFAGMRRKGKLDEADIKAANREIKLALLEADVNFKVVKRFTKAVSERAQGEEILKSL 70
Query: 363 TP-RRSIDILRD--VHAAKEQRKPY--------VVVFVGVNGVGKSTNLAKVAYWLL-QH 410
TP ++ I ++ D + KP + + VG+ G GK+T K+A L ++
Sbjct: 71 TPGQQYIKVVNDEMTRLLGGEIKPLELQKSDLNIFMMVGLQGAGKTTTAGKIANLLRKEN 130
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
K+ ++ ACD +R A++QL+ +L +P++ K+P I+A +AI A + G ++V+
Sbjct: 131 KLKPLLVACDVYRPAAIDQLKVLGEQLDIPVYTMPGMKEPRIIANQAISYAQKQGYNLVI 190
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q +E LMR L + L +P L V + + G ++V+ F+ +L
Sbjct: 191 LDTAGRLQIDERLMRELMDIKELVHPTETLLVVDGMTGQESVNVAKSFDDQLD------- 243
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I G++LTK D D + GAALS+ Y +G P++F+G G+ +DL++ +
Sbjct: 244 ---ISGVVLTKLDG-DTRGGAALSVTYTTGKPIVFIGSGEKLSDLERFH 288
>gi|335046137|ref|ZP_08539160.1| signal recognition particle protein [Oribacterium sp. oral taxon
108 str. F0425]
gi|333759923|gb|EGL37480.1| signal recognition particle protein [Oribacterium sp. oral taxon
108 str. F0425]
Length = 460
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 152/286 (53%), Gaps = 37/286 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S++FQ ++GK L + D+ ALK ++ L+ +V A+ E + L
Sbjct: 10 LSTIFQGLSGKGKLSEDDVNLALKEVRMALLEADVNFKLVKDFVAKVKEKAIGEEVFSSL 69
Query: 363 TPRRS-IDILRDVHAA-----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+P ++ I I++D A + Q + V++ VG+ G GK+T AK+A +
Sbjct: 70 SPAQTVIKIVKDELTAMMGEENTELKLRPQSEITVLMMVGLQGAGKTTTAAKLAGKFQKM 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R A+EQLR +A +L +P F G + P +AK A +EA G ++++
Sbjct: 130 HRKPLLVACDIYRPAAIEQLRVNAEKLSIPFFSLGNQVKPEEIAKRAYEEAKEKGYNLLI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q ++ LM+ L ++ D + +A+ G +AV+ F++ +
Sbjct: 190 LDTAGRLQIDDALMQELKRMKAAVPVDWTILTVDAMTGQEAVNVSQSFSEDIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+DG++LTK D D + GAALS+ ++G P++F+G G+ DL+
Sbjct: 243 ---VDGVILTKCDG-DTRGGAALSIKAMTGQPILFLGMGEKLVDLE 284
>gi|406838053|ref|ZP_11097647.1| signal recognition particle-docking protein FtsY [Lactobacillus
vini DSM 20605]
Length = 335
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 163/322 (50%), Gaps = 43/322 (13%)
Query: 288 EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIAG-------------KANLDKAD 334
++ FS D + +ED E K+++ K FS+ S+ + L +AD
Sbjct: 8 KQAFSGDQQPKEDAESQKYDQSLEKSRNTFSAKLNSLLANFRSVDEEFFDNLEETLIEAD 67
Query: 335 L--EPALKA---LKDRLMTKNVAAMEEALVRILTPRRSIDILR------DVHAAKEQRKP 383
+ E A+K LK + KN +E I+ ++ ID+ D Q P
Sbjct: 68 VGFETAVKISDELKQEVKLKNAKTTQEVAETII--QKLIDLYEQEGQNEDYQLHYAQTGP 125
Query: 384 YVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE 443
V +FVGVNGVGK+T + K+A+ L + V++AA DTFR+GA+EQL +++ VP+ +
Sbjct: 126 TVFLFVGVNGVGKTTTIGKLAFRLKKEGKRVLLAAGDTFRAGAIEQLTQWGKKVGVPVVQ 185
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNPD 497
K + DPA V +A+++A + DV+LVDTAGR+Q+ LMR L+K+ + P
Sbjct: 186 KPAQSDPASVVYDAVKKAQQENYDVLLVDTAGRLQNKVNLMRELAKISRVITREVPTAPQ 245
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
VL +A G +A+ Q +F +++P + GI+LTK D + G L++
Sbjct: 246 EVLLALDATTGQNALSQAKQFK------TTTP----LTGIILTKLDGT-ARGGIVLAIRN 294
Query: 558 VSGAPVMFVGCGQSYTDLKKLN 579
PV VG G+ DL+ +
Sbjct: 295 ELHIPVKLVGLGEKMNDLQDFD 316
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 150/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+ + GK L + D++ A++ +K L+ +V A+ + ++ L
Sbjct: 10 LQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL 69
Query: 363 TP-RRSIDILRD----VHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D + + + R P V++ VG+ G GK+T K+A L +
Sbjct: 70 TPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++ ACD R A++QL+ + VP+F G + +P +AK +I A + SDV+++
Sbjct: 130 KNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + PD +L V +A+ G DAV+ S FN++L
Sbjct: 190 DTAGRLHIDEELMEELVNIKRAVQPDEILLVVDAMTGQDAVNVASSFNERLD-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+ P+ +VG G+ TDL+
Sbjct: 242 --ITGVVLTKLDG-DTRGGAALSIKAVTQKPIKYVGTGEKLTDLE 283
>gi|348026284|ref|YP_004766089.1| signal recognition particle protein [Megasphaera elsdenii DSM
20460]
gi|341822338|emb|CCC73262.1| signal recognition particle protein [Megasphaera elsdenii DSM
20460]
Length = 450
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 36/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------------AAMEEALVRI 361
F + F+ + GK L + D+ ALK ++ L+ +V A EE +
Sbjct: 10 FQAAFKKLRGKGKLSEEDVSEALKEMRRALLEADVNFAVTKDFIKKVKEKAVGEEVFGSL 69
Query: 362 LTPRRSIDILRD----VHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+ I I+RD + + R P +++ VG+ G GK+T AK+A L
Sbjct: 70 NASQTVIKIVRDELTELLGGTQSRITIAPKPPTIIMLVGLQGAGKTTTAAKLAKKLKSQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
S +M A D +R A+ QL+ + L +P++ + KDP +A+ AI AT + DVV++
Sbjct: 130 KSPLMVAADVYRPAAITQLQVLGQELDMPVYTEEGSKDPVAIAQHAIPYATSHLRDVVII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ NE LM L + +P +L V +A+ G DAV S F++ L
Sbjct: 190 DTAGRLHINETLMDELINIKNEVHPHEILLVVDAMTGQDAVTAASAFDKALG-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
IDGI++TK D D + GAALS+ V+G P+ F+G + L++ +
Sbjct: 242 --IDGIIMTKLDG-DARGGAALSIKAVTGKPIKFIGVSEKLDGLEEFH 286
>gi|392948726|ref|ZP_10314329.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
pentosus KCA1]
gi|392436003|gb|EIW13924.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
pentosus KCA1]
Length = 484
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T + K+A L + K +M A D +R A+EQL+ ++
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQKARPLMIAADVYRPAAIEQLQQVGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F+ G + DP + ++ + +A N +D V +DTAGR+Q +E LM L+ + L +P
Sbjct: 156 IDVPVFQLGTDVDPVEIVRQGMAQAQENHNDYVFIDTAGRLQIDEQLMNELANIKDLVHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G +AV+ FN KL + G++LTK D D + GAALS+
Sbjct: 216 DEILLVIDAMTGQNAVNTAEGFNDKLD----------VTGVVLTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P+ FVG G+ TDL
Sbjct: 265 AVTGKPIKFVGQGEKMTDL 283
>gi|302874777|ref|YP_003843410.1| signal recognition particle protein [Clostridium cellulovorans
743B]
gi|307690607|ref|ZP_07633053.1| signal recognition particle protein [Clostridium cellulovorans
743B]
gi|302577634|gb|ADL51646.1| signal recognition particle protein [Clostridium cellulovorans
743B]
Length = 452
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 145/280 (51%), Gaps = 36/280 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
+ + GK L +AD++ A+K +K L+ +V + ++ LTP +
Sbjct: 14 LKKLRGKGKLTEADIKEAMKEVKRALLEADVNFKLVKEFVNKVSDKCLGSEVLESLTPGQ 73
Query: 367 SI-----DILRDVHAAKEQRKPY------VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ D L+D+ + E +++ VG+ G GK+T K+A L + +
Sbjct: 74 QVIKIVNDELKDLMGSTESELKLSSTGFTIIMLVGLQGAGKTTMAGKLALNLRKKNKKPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL +++ +P+F G + P ++K I+ A NG++VV++DTAG
Sbjct: 134 LVACDVYRPAAIKQLEVLGKQIDIPVFSMGDKISPVEISKAGIKHAKDNGNNVVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+Q +E LM L + PD +L V +++ G +AV+ F++ L ID
Sbjct: 194 RLQIDEELMEELKNIKADVTPDEILLVVDSMTGQEAVNVAKTFDETLD----------ID 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
G++LTK D D K GAALS+ ++G P+ FVG G+ DL
Sbjct: 244 GVVLTKLDG-DTKGGAALSIKALTGKPIKFVGLGEKVNDL 282
>gi|389792991|ref|ZP_10196170.1| signal recognition particle-docking protein FtsY [Rhodanobacter
fulvus Jip2]
gi|388435345|gb|EIL92254.1| signal recognition particle-docking protein FtsY [Rhodanobacter
fulvus Jip2]
Length = 374
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 141/264 (53%), Gaps = 33/264 (12%)
Query: 339 LKALKDRLMTKNVA-------AMEEALVRILTP-RRSIDILRDVHAAKEQRKPYVVVFVG 390
++AL+ R+ + A A+ +ALV +L P + + + R+P+VV+ VG
Sbjct: 123 VEALRKRMHKREFADAPALLDALRQALVALLQPVEKPLQV--------SGRQPFVVLVVG 174
Query: 391 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 450
+NG GK+T + K+A + +VM+AA DTFR+ AVEQL+T R +VP+ +G + D
Sbjct: 175 INGAGKTTTIGKLARRWSDERHAVMLAAGDTFRAAAVEQLKTWGERNRVPVISQGQDADA 234
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL------IYLNNPDLVLFVGE 504
A V +A+Q A G+DV++ DTAGR+ LM L K+ I P VL V +
Sbjct: 235 ASVIFDALQAARSRGADVLIADTAGRLHTQGGLMDELGKIARVLKKIDAEAPHEVLMVID 294
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
G +AV+Q+ +F + + + G+++TK D K G ++ G P+
Sbjct: 295 GTTGQNAVNQVRQFREIVG----------VTGLVVTKLDGT-AKGGVVFALAREFGLPIR 343
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
FVG G+S TDL+ + ++ V LL
Sbjct: 344 FVGLGESATDLRTFDAQAYVDGLL 367
>gi|313885165|ref|ZP_07818917.1| signal recognition particle-docking protein FtsY [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619856|gb|EFR31293.1| signal recognition particle-docking protein FtsY [Eremococcus
coleocola ACS-139-V-Col8]
Length = 337
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 32/264 (12%)
Query: 341 ALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRK---------PYVVVFVGV 391
A++D + ++NV E+ R I+ + V+ E P V++FVGV
Sbjct: 85 AIRDEIESQNVYKGED------VKRVMIETMVKVYEDHEHENVSLNENPDGPTVILFVGV 138
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPA 451
NGVGK+T++ K+ Y L + V+MAA DTFR+GAVEQL +RL +P+ + DPA
Sbjct: 139 NGVGKTTSVGKIGYQLKESGKKVIMAAADTFRAGAVEQLSVWGQRLDIPVVTGIDQGDPA 198
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSK---LIYLNNPD---LVLFVGEA 505
V +A++ A D +LVDTAGR+Q LM+ L+K +I NP+ VL V +A
Sbjct: 199 SVVFDAVKAAKEGNYDYLLVDTAGRLQTKANLMQELAKIKRIIERENPNGVQEVLLVLDA 258
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
G +A+ Q +FN+ I G++LTK D K G LS+ Y PV F
Sbjct: 259 TTGQNALIQAKQFNEATE----------ITGLVLTKLDGT-AKGGVILSIRYELDIPVKF 307
Query: 566 VGCGQSYTDLKKLNVKSIVKTLLK 589
+G G+ DL+ N + + L+K
Sbjct: 308 IGLGEGANDLQPFNAEEYMFNLVK 331
>gi|217967920|ref|YP_002353426.1| signal recognition particle protein [Dictyoglomus turgidum DSM
6724]
gi|217337019|gb|ACK42812.1| signal recognition particle protein [Dictyoglomus turgidum DSM
6724]
Length = 436
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 38/288 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRILTPRRSIDIL 371
T +F+ + GK L + D+E AL+ ++ L+ + ++E L + T D+L
Sbjct: 6 TSRLQEIFRKLRGKGKLTEKDIEEALREVRQALLEADAHYKVVKELLNNVKTKALQEDVL 65
Query: 372 RDVHAAKE-----------------------QRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
+ V A++ +KP +++ VG+ G GK+T AK+AY L
Sbjct: 66 KSVTPAEQIIRILYYELLNILGGEKVDLNLGDKKPGIILVVGLQGSGKTTTCAKLAYRLS 125
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
Q + V++ DTFR A +QL+ +++VP++ G +P + A++ A SDV
Sbjct: 126 QEQRRVLLVGADTFRPAAGKQLQILGEKIKVPVYIDG--SNPFEIIDGALKVAREKFSDV 183
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
++VDT GR+ +E +M LS+L +P +L V + + G DAV+ KFN+KL
Sbjct: 184 MIVDTTGRLHIDEEMMNELSELNKRYHPSEILLVVDGMTGQDAVNIAEKFNEKLP----- 238
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G++LTK D D + GAALS+ ++G P+ F+G G+ DL+
Sbjct: 239 -----LTGVILTKMDG-DARGGAALSVKAITGKPIKFIGVGEKIEDLE 280
>gi|425464792|ref|ZP_18844102.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
gi|389833087|emb|CCI22684.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9809]
Length = 478
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVKPDDTLLVVDAMTGQEAANLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|345017770|ref|YP_004820123.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033113|gb|AEM78839.1| signal recognition particle protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 446
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 150/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+ + GK L + D++ A++ +K L+ +V A+ + ++ L
Sbjct: 10 LQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL 69
Query: 363 TP-RRSIDILRD----VHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D + + + R P V++ VG+ G GK+T K+A L +
Sbjct: 70 TPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++ ACD R A++QL+ + VP+F G + +P +AK +I A + SDV+++
Sbjct: 130 KNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYARSHNSDVIII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + PD +L V +A+ G DAV+ S FN++L
Sbjct: 190 DTAGRLHIDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLD-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+ P+ +VG G+ TDL+
Sbjct: 242 --ITGVILTKLDG-DTRGGAALSIKAVTQKPIKYVGAGEKLTDLE 283
>gi|330995101|ref|ZP_08319018.1| signal recognition particle-docking protein FtsY [Paraprevotella
xylaniphila YIT 11841]
gi|329576677|gb|EGG58180.1| signal recognition particle-docking protein FtsY [Paraprevotella
xylaniphila YIT 11841]
Length = 318
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 154/308 (50%), Gaps = 47/308 (15%)
Query: 313 KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------MEEALVR--I 361
K +F + +++AGK+ +D + L L++ L+T +V +E+ + R
Sbjct: 23 KESFFGKLTRAVAGKSKVD----DDVLDRLEEVLVTSDVGVDTTLNIIDRIEKRVARDKY 78
Query: 362 LTPRRSIDILRDVHAA---------------KEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+T DILRD A+ E +KPYV++ VGVNGVGK+T + K+AY
Sbjct: 79 VTVNELNDILRDEIASLLTENNTADTEGFVLPEGKKPYVIMVVGVNGVGKTTTIGKLAYQ 138
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
+ V + A DTFR+ AVEQL + R+ VPI ++ DPA VA + + AT NG+
Sbjct: 139 FKKAGKKVYLGASDTFRAAAVEQLEIWSERVGVPIVKQQMGSDPASVAFDTLSSATANGA 198
Query: 467 DVVLVDTAGRMQDNEPLMRALSKL------IYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
DVVL+DTAGR+ + + LM LSK+ + + P V+ V + G +A +Q +F
Sbjct: 199 DVVLIDTAGRLHNKKGLMDELSKIKRVMQKVVPDAPHDVMLVLDGSTGQNAFEQAKQFT- 257
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LA +S +DG K G + + PV ++G G+ DL+ N
Sbjct: 258 -LATEVTSMAITKLDGTA---------KGGVVIGISDQFKIPVRYIGLGEGVEDLQPFNR 307
Query: 581 KSIVKTLL 588
K VK+L
Sbjct: 308 KEFVKSLF 315
>gi|167037689|ref|YP_001665267.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116104|ref|YP_004186263.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389503|ref|ZP_08211070.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392940886|ref|ZP_10306530.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
gi|166856523|gb|ABY94931.1| signal recognition particle protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929195|gb|ADV79880.1| signal recognition particle protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994508|gb|EGD52933.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
JW 200]
gi|392292636|gb|EIW01080.1| LOW QUALITY PROTEIN: signal recognition particle protein
[Thermoanaerobacter siderophilus SR4]
Length = 446
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 150/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+ + GK L + D++ A++ +K L+ +V A+ + ++ L
Sbjct: 10 LQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL 69
Query: 363 TP-RRSIDILRD----VHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D + + + R P V++ VG+ G GK+T K+A L +
Sbjct: 70 TPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++ ACD R A++QL+ + VP+F G + +P +AK +I A + SDV+++
Sbjct: 130 KNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYARSHNSDVIII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + PD +L V +A+ G DAV+ S FN++L
Sbjct: 190 DTAGRLHIDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNERLD-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+ P+ +VG G+ TDL+
Sbjct: 242 --ITGVILTKLDG-DTRGGAALSIKAVTQKPIKYVGTGEKLTDLE 283
>gi|325680130|ref|ZP_08159696.1| signal recognition particle protein [Ruminococcus albus 8]
gi|324108205|gb|EGC02455.1| signal recognition particle protein [Ruminococcus albus 8]
Length = 457
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 159/297 (53%), Gaps = 37/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
S+F+ + G+ L +AD+ A+K +K L+ +V+ ++ E +++ L
Sbjct: 10 LGSVFKKLKGRGKLTEADVREAMKEVKMALLEADVSYKVVKDFVANVTERSVGEDVLKSL 69
Query: 363 TP-RRSIDILRD--VHAAKE--------QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D V E + P V++ G+ G GK+T+ AK+A +
Sbjct: 70 TPGQQVIKIVNDELVKLMGEANSKINFPSKPPCVIMMCGLQGSGKTTHAAKLAKMFKRQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R A++QL+ A + VP+FE G + DP + K+ +++A G+D+V++
Sbjct: 130 NRPLLIAADVYRPAAIDQLKIVAEKADVPVFEMG-QIDPRKIVKQGLKQAKDYGNDLVII 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + + P ++ V +A++G DAV S F++ L
Sbjct: 189 DTAGRLHIDEELMDELKDIKKIAEPSEIMLVVDAMIGQDAVKVASSFDEALG-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
ID ++LTK D+ D + GAALS++ V+G P+ FVG G+ + + + + + +L
Sbjct: 241 --IDSVILTKLDS-DTRGGAALSVLAVTGKPIKFVGMGEKLDEFEPFHPERMASRIL 294
>gi|260583609|ref|ZP_05851357.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
gi|260158235|gb|EEW93303.1| signal recognition particle protein [Granulicatella elegans ATCC
700633]
Length = 478
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ P VV+ +G+ G GK+T K+A +L +H+ ++ A D +R A++QL+T ++L
Sbjct: 99 KPPTVVMMIGLQGAGKTTTAGKLASFLAKHENKRPLLVAADVYRPAAIDQLQTLGKQLNY 158
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+F G + +P +A++AI+ AT G D+V++DTAGR+ +E LM L + + NP+ +
Sbjct: 159 PVFSLGTDVNPVEIARQAIERATIEGRDLVIIDTAGRLHIDEALMEELQNIKAVANPNEI 218
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
L V + + G DAV+ FN++L I G++LTK D D + GAALS+ V+
Sbjct: 219 LLVVDVMTGQDAVNVAETFNERLD----------ITGVILTKLDG-DTRGGAALSIRSVT 267
Query: 560 GAPVMFVGCGQSYTDLK 576
G P+ F G G+ D +
Sbjct: 268 GKPIKFSGRGEKLEDFE 284
>gi|363897300|ref|ZP_09323839.1| signal recognition particle protein [Oribacterium sp. ACB7]
gi|361958797|gb|EHL12094.1| signal recognition particle protein [Oribacterium sp. ACB7]
Length = 463
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 152/286 (53%), Gaps = 37/286 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S++FQ ++GK L + D+ ALK ++ L+ +V A+ E + L
Sbjct: 10 LSTIFQGLSGKGKLSEDDVNLALKEVRMALLEADVNFKLVKDFVAKVKEKAIGEEVFSSL 69
Query: 363 TPRRS-IDILRDVHAA-----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+P ++ I I++D A + Q + V++ VG+ G GK+T AK+A +
Sbjct: 70 SPAQTVIKIVKDELTAMMGEENTELKLRPQSEITVLMMVGLQGAGKTTTAAKLAGKFQKM 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R A+EQLR +A +L +P F G + P +AK A +EA G ++++
Sbjct: 130 HRKPLLVACDIYRPAAIEQLRVNAEKLSIPFFSLGNQVKPEEIAKRAYEEAKEKGYNLLI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q ++ LM+ L ++ D + +A+ G +AV+ F++ +
Sbjct: 190 LDTAGRLQIDDALMQELKRMKAAVPVDWTILTVDAMTGQEAVNVSQSFSEDIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+DG++LTK D D + GAALS+ ++G P++F+G G+ DL+
Sbjct: 243 ---VDGVILTKCDG-DTRGGAALSIKAMTGQPILFLGMGEKLADLE 284
>gi|303327980|ref|ZP_07358419.1| signal recognition particle protein [Desulfovibrio sp. 3_1_syn3]
gi|345891346|ref|ZP_08842193.1| signal recognition particle protein [Desulfovibrio sp. 6_1_46AFAA]
gi|302861806|gb|EFL84741.1| signal recognition particle protein [Desulfovibrio sp. 3_1_syn3]
gi|345048343|gb|EGW52181.1| signal recognition particle protein [Desulfovibrio sp. 6_1_46AFAA]
Length = 506
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
R+P V++ VG+ G GK+T+ K+A L + K+ + D +R A++QL A++L +P
Sbjct: 98 REPAVIMLVGLQGSGKTTSAGKIANLLRRQKMRPYLVPADVYRPAAIDQLTVLAKQLDMP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
F E P +A A+ +A + V+L+DTAGR+ +EPLM LS + P +L
Sbjct: 158 CFPSTTEMKPVDIATAALAQAREEQATVLLLDTAGRLHVDEPLMEELSAIKAAVQPQEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A+ G DAV FN++L + G++LTK D D + GAALS+ V+G
Sbjct: 218 FVADAMTGQDAVTVAEAFNERLG----------LTGVVLTKMDG-DARGGAALSIRSVTG 266
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
APV FVG G+ ++++ + I +L
Sbjct: 267 APVKFVGVGEKLSEMEVFHPDRIAGRIL 294
>gi|428770653|ref|YP_007162443.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
gi|428684932|gb|AFZ54399.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium aponinum PCC 10605]
Length = 480
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
A+ + P VV+ G+ G GK+T AK+A +L + K S +M A D +R A++QL T +
Sbjct: 94 AEADKPPRVVLMAGLQGAGKTTATAKLALYLQKQKRSCLMVATDVYRPAAIQQLITLGTQ 153
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+FE G +P +A++ ++EA G D V++DTAGR+Q ++ +M L+++ NP
Sbjct: 154 ISVPVFELGTGANPVDIARQGLEEAKNKGIDTVIIDTAGRLQIDQEMMAELAQVKDAVNP 213
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D VL V +++ G +A + F++++ I G +LTK D D + GAALS+
Sbjct: 214 DEVLLVVDSMTGQEAANVTRSFHEEIG----------ITGAILTKMDG-DSRGGAALSIR 262
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
+SG P+ F+G G+ L+
Sbjct: 263 TISGQPIKFIGVGEKVEALE 282
>gi|409911192|ref|YP_006889657.1| signal recognition particle protein [Geobacter sulfurreducens
KN400]
gi|298504758|gb|ADI83481.1| signal recognition particle protein [Geobacter sulfurreducens
KN400]
Length = 452
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P ++ VG+ G GK+T+ K+A L + ++ D +R A+EQL+T R+L V
Sbjct: 99 KPPVSIMMVGLQGAGKTTSCGKLARLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVE 158
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F+ ++DP + +EA++ AT NG DVV++DTAGR Q +E LM L ++ P +L
Sbjct: 159 VFDSRADQDPVDICREALRYATLNGFDVVILDTAGRHQIDEYLMNELVRIKEAAEPREIL 218
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A+ G +AV+ S FN +L I G++LTK D D K GAALS+ V+G
Sbjct: 219 FVADAMTGQEAVNVASGFNDRLD----------ITGVVLTKLDG-DAKGGAALSIRAVTG 267
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV VG G+ L+ + +V +L
Sbjct: 268 KPVKLVGVGEKLDALEVFHADRLVSRIL 295
>gi|389806165|ref|ZP_10203305.1| signal recognition particle-docking protein FtsY [Rhodanobacter
thiooxydans LCS2]
gi|388446164|gb|EIM02210.1| signal recognition particle-docking protein FtsY [Rhodanobacter
thiooxydans LCS2]
Length = 375
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
RKP+VV+ VG+NG GK+T + K+A + +VM+AA DTFR+ AVEQL+T R VP
Sbjct: 161 RKPFVVLVVGINGAGKTTTIGKLARRWRDEQRAVMLAAGDTFRAAAVEQLKTWGERNAVP 220
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------N 494
+ +G + D A V +A+Q A G+DV++ DTAGR+ LM L K+ + +
Sbjct: 221 VISQGQDADAASVIFDALQAARSRGADVLIADTAGRLHTQGGLMDELGKIARVLKKLDAD 280
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
P VL V + G +AV Q+ +F Q + + G+++TK D K G +
Sbjct: 281 APHEVLMVIDGTTGQNAVSQVRQFRQIVG----------VTGLVVTKLDGT-AKGGVVFA 329
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G P+ FVG G+S TDL+ + V LL
Sbjct: 330 LAREFGLPIRFVGLGESATDLRPFEAAAFVDGLL 363
>gi|119488999|ref|ZP_01621934.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
gi|119454955|gb|EAW36098.1| Signal recognition particle protein [Lyngbya sp. PCC 8106]
Length = 480
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P +V+ G+ G GK+T AK+A L + + +M A D +R A++QL+T ++++VP+F
Sbjct: 100 PTIVLMAGLQGTGKTTATAKLALHLRKENRTALMVATDVYRPAAIDQLKTLGQQIEVPVF 159
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E G + DP +A++ ++ A G D V++DTAGR+Q ++ +M L+++ + P L V
Sbjct: 160 ELGSDADPVEIARQGVEYAKTQGVDTVIIDTAGRLQIDQDMMAELARIKAVVQPHDTLLV 219
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A FN+++ I G +LTK D D + GAALS+ +SGAP
Sbjct: 220 VDAMTGQEAATLTQTFNEQIG----------ISGAILTKLDG-DSRGGAALSIRRISGAP 268
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ L+
Sbjct: 269 IKFVGVGEKVEALQ 282
>gi|332297535|ref|YP_004439457.1| signal recognition particle protein [Treponema brennaborense DSM
12168]
gi|332180638|gb|AEE16326.1| signal recognition particle protein [Treponema brennaborense DSM
12168]
Length = 468
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 165/303 (54%), Gaps = 38/303 (12%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA---- 357
K T FS + + ++GK+++ + ++E ++ +K L+ +V + +EEA
Sbjct: 29 KITNTFSDVVRKVSGKSSITEKNIEETVEQIKIALLEADVNLRVVRRFVNSTIEEAKGEK 88
Query: 358 LVRILTPRRS---------IDILRDVHAAKEQRKP---YVVVFVGVNGVGKSTNLAKVAY 405
++R + P + + +L D + + P V++ +G+ G GK+T +K+A
Sbjct: 89 VLRSVDPGQQFVKIIYDKIVSLLGDAKQDLKLKGPDTQSVILLLGLQGAGKTTAASKLAA 148
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
L + ++AACD R A++QL ++ +P++ K KD VAK A+ A +NG
Sbjct: 149 RLAKEGRKPLLAACDLVRPAAIQQLCVLGEKIGIPVY-KEDSKDAVRVAKNALAYAKKNG 207
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
D ++VDTAGR+Q +E +M ++ + +PD VL V +A+ G +AVD F+++L+
Sbjct: 208 FDTLIVDTAGRLQIDESMMDEIAAVKKAVSPDEVLLVADAMTGQNAVDIAKSFDERLS-- 265
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
+ G++LTKFD+ D + GAALS+ V+G P++F+G G+ +D + + + I
Sbjct: 266 --------LTGVILTKFDS-DARGGAALSLKSVTGKPILFIGTGEKTSDFEPFHPERIAS 316
Query: 586 TLL 588
+L
Sbjct: 317 RIL 319
>gi|300767270|ref|ZP_07077182.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180484|ref|YP_003924612.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275233|ref|ZP_12890556.1| signal recognition particle protein Ffh [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821152|ref|YP_007414314.1| Signal recognition particle protein [Lactobacillus plantarum ZJ316]
gi|300495089|gb|EFK30245.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045975|gb|ADN98518.1| signal recognition particle protein [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376008784|gb|EHS82113.1| signal recognition particle protein Ffh [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274649|gb|AGE39168.1| Signal recognition particle protein [Lactobacillus plantarum ZJ316]
Length = 484
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T + K+A L + +M A D +R A+EQL+ R+
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQDARPLMIAADVYRPAAIEQLQQVGRQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F+ G + DP + ++ + +A N +D V +DTAGR+Q +E LM L+ + L +P
Sbjct: 156 IDVPVFQLGTDVDPVEIVRQGMAQAQENHNDYVFIDTAGRLQIDEQLMNELANIKDLVHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G +AV+ FN KL + G++LTK D D + GAALS+
Sbjct: 216 DEILLVIDAMTGQNAVNTAEGFNDKLD----------VTGVVLTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P+ FVG G+ TDL
Sbjct: 265 AVTGKPIKFVGQGEKMTDL 283
>gi|381209995|ref|ZP_09917066.1| signal recognition particle protein [Lentibacillus sp. Grbi]
Length = 447
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 118/209 (56%), Gaps = 12/209 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
R P V++ G+ G GK+T K+A L + H ++ A D +R A++QL T +L +
Sbjct: 99 RPPTVIMMAGLQGAGKTTTSGKLASHLRKKHNRKPLLVAADIYRPAAIDQLETVGHQLGM 158
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+F KG + +P +AKEA+++A +D V++DTAGR+ +E LM L ++ NPD +
Sbjct: 159 PVFSKGTDANPVDIAKEAVEQAKEEHNDYVIIDTAGRLHVDEDLMGELEQIKAAVNPDEI 218
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
V +A+ G DAV+ FN++L + G++LTK D D + GAALS+ V+
Sbjct: 219 FLVVDAMTGQDAVNVAESFNEQLE----------LSGVVLTKLDG-DTRGGAALSIRAVT 267
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G P+ F G G+ L+ +S+ +L
Sbjct: 268 GTPIKFAGMGEKLDQLEPFRPESMASRIL 296
>gi|344205153|ref|YP_004790295.1| signal recognition particle protein [Mycoplasma putrefaciens KS1]
gi|343957076|gb|AEM68791.1| signal recognition particle protein [Mycoplasma putrefaciens KS1]
Length = 447
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 137/239 (57%), Gaps = 21/239 (8%)
Query: 351 VAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ- 409
V + E L IL I+I DV +KP V++ VG+ G GK+T+ AK+AY L +
Sbjct: 77 VKIVHEELTEILG---KINIPLDVS-----KKPTVIMMVGLQGSGKTTSAAKLAYHLTKK 128
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
K V+M D +R GA+EQL +++ V +FEK +++P I AK+A++ A N DV+
Sbjct: 129 EKKKVLMVGLDIYRPGAIEQLVQLGQKINVEVFEK-QKQNPLITAKQALEYARDNNFDVI 187
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++DTAGR+Q + LM L+ L L +P L V +A++G + ++ ++FN KL
Sbjct: 188 ILDTAGRLQIDPVLMDELNNLRKLTSPSETLLVVDAMIGQEIINVTNEFNNKLK------ 241
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
++G+++TK D D + GA LS+ Y++ P+ F+G G+S L + K I L+
Sbjct: 242 ----LNGVIVTKLDG-DARGGATLSISYMTKLPIKFIGEGESINALSAFHPKRIADRLM 295
>gi|350546642|ref|ZP_08916019.1| signal recognition particle protein [Mycoplasma iowae 695]
gi|349503801|gb|EGZ31367.1| signal recognition particle protein [Mycoplasma iowae 695]
Length = 445
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 45/292 (15%)
Query: 317 FSSMFQSIAGK--------ANLDKADLEPALKALKDRLMTKNVAAM----------EEAL 358
F SM SI K + + + DL LK ++ L+ +V M E A+
Sbjct: 2 FKSMIASIVSKNMKKKLENSTIKEEDLTDVLKQIRIALLDADVNLMVTKTLLKNIKEAAI 61
Query: 359 VRILTPRRSID-----ILRD---------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
++ P R D I+++ + ++KP ++ VG+ G GK+T+ K+A
Sbjct: 62 GTMIDPGRKPDEVLLLIIKEELVKILGKKTNPIDYKKKPLKIMMVGLQGSGKTTSAGKIA 121
Query: 405 YWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATR 463
Y+L + + ++ ACD +R A++QLRT A + +EK ++DP +KEAI A +
Sbjct: 122 YYLKNKQEKKPLLVACDIYRPAAIDQLRTLANEVGTDFYEKS-KQDPVKTSKEAIALAEK 180
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLA 523
N +D +++DTAGR+Q NE LM L K+ NPD +L V +A+ G D ++ +FN KL
Sbjct: 181 NKNDAIIIDTAGRLQTNEELMTELVKIKKNVNPDEILLVVDAMAGQDIINVAQEFNNKLR 240
Query: 524 DLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+ GI++TK D+ D + GAALS+ + PV G G+ L
Sbjct: 241 ----------LTGIVITKLDS-DARAGAALSLTSILDVPVKLTGVGEKLASL 281
>gi|257457465|ref|ZP_05622633.1| signal recognition particle protein [Treponema vincentii ATCC
35580]
gi|257445088|gb|EEV20163.1| signal recognition particle protein [Treponema vincentii ATCC
35580]
Length = 442
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 158/291 (54%), Gaps = 38/291 (13%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA---- 357
K T FS + + I+GKA + + ++E A++ +K L+ +V A +EEA
Sbjct: 4 KITNTFSGIVRKISGKATITEKNIEEAVEEIKIALLEADVNLRVVRRFINATIEEAKGEA 63
Query: 358 LVRILTPRRS---------IDILRDVHAAKEQRKP---YVVVFVGVNGVGKSTNLAKVAY 405
+++ + P + + L D + + + P V++F+G+ G GK+T+ AK+A
Sbjct: 64 VLKSVNPGQQFVKIVHDKILSFLGDEKKSLQLKGPDTQSVILFLGLQGSGKTTSAAKLAA 123
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
L + ++ ACD R AVEQL + R+ VP++++ KD VA+ A+ A +NG
Sbjct: 124 RLKKEGRKPLLVACDLVRPAAVEQLFSLGERIDVPVYKEDT-KDAVRVAQNAVTFARKNG 182
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
D V+VDTAGR+Q +E +M+ ++ + NP L V +A+ G +A + F+++
Sbjct: 183 FDTVIVDTAGRLQIDEAMMKEIAAVKKAVNPVETLLVADAMTGQNAAEVAKAFDEQAG-- 240
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G++LTKFD+ D + GAALS+ V+G P+++VG G+ D +
Sbjct: 241 --------LTGVILTKFDS-DARGGAALSLKTVTGKPILYVGVGEKIEDFE 282
>gi|254556541|ref|YP_003062958.1| signal recognition particle protein Ffh [Lactobacillus plantarum
JDM1]
gi|380032469|ref|YP_004889460.1| signal recognition particle protein Ffh [Lactobacillus plantarum
WCFS1]
gi|254045468|gb|ACT62261.1| signal recognition particle protein Ffh [Lactobacillus plantarum
JDM1]
gi|342241712|emb|CCC78946.1| signal recognition particle protein Ffh [Lactobacillus plantarum
WCFS1]
Length = 484
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T + K+A L + +M A D +R A+EQL+ R+
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQDARPLMIAADVYRPAAIEQLQQVGRQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F+ G + DP + ++ + +A N +D V +DTAGR+Q +E LM L+ + L +P
Sbjct: 156 IDVPVFQLGTDVDPVEIVRQGMAQAKENHNDYVFIDTAGRLQIDEQLMNELANIKDLVHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G +AV+ FN KL + G++LTK D D + GAALS+
Sbjct: 216 DEILLVIDAMTGQNAVNTAEGFNDKLD----------VTGVVLTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P+ FVG G+ TDL
Sbjct: 265 AVTGKPIKFVGQGEKMTDL 283
>gi|168001070|ref|XP_001753238.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695524|gb|EDQ81867.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 617
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T K+A + + SVMM A D +R A++QL T ++++VP+F
Sbjct: 225 PTVILMAGLQGVGKTTACGKLALFCKKKGKSVMMVATDVYRPAAIDQLVTLGKQVEVPVF 284
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E G + PA +AK + E + G DV++VDTAGR+Q + +M L ++ + NP VL V
Sbjct: 285 EAGNQLRPAEIAKRGLAEGKKQGIDVIIVDTAGRLQVDRGMMDELKQIKQVVNPTEVLLV 344
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A ++ FN ++ I G +LTK D D + GAALS+ VS P
Sbjct: 345 VDAMTGQEAAGLVASFNLEIG----------ITGAILTKLDG-DSRGGAALSVKEVSNKP 393
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ T L+
Sbjct: 394 IKFVGEGEGMTALE 407
>gi|390437797|ref|ZP_10226315.1| Signal recognition particle protein [Microcystis sp. T1-4]
gi|389838790|emb|CCI30439.1| Signal recognition particle protein [Microcystis sp. T1-4]
Length = 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGQLAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVKPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|425451260|ref|ZP_18831082.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
gi|389767641|emb|CCI07099.1| Signal recognition particle protein [Microcystis aeruginosa PCC
7941]
Length = 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVKPDDTLLVVDAMTGQEAANLTHTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|404329162|ref|ZP_10969610.1| signal recognition particle protein [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 447
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 157/289 (54%), Gaps = 37/289 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S + I GK + +AD++ + ++ L+ +V A+ + +++ L
Sbjct: 10 LQSAMRKIRGKGKVSEADVKQMTREIRLALLEADVNFKVVKTFVKRVQERAIGQEVLKSL 69
Query: 363 TPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQ-H 410
TP + I D L ++ ++ + P V++FVG+ G GK+T+ AK+A ++ + H
Sbjct: 70 TPGQQIIKVVQDELTELMGGEQTKLNFALKPPTVILFVGLQGAGKTTSAAKLANYIRKAH 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+M A D +R A++QL+T R+L +P+F G + +P + ++ +++A + +D+V+
Sbjct: 130 NKKPLMIAADIYRPAAIKQLQTLGRQLDIPVFSLGDQVNPVDIVRQGLEQAQTDHNDLVM 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ ++ LM L ++ +++PD + V +A+ G DAV+ FN +L
Sbjct: 190 IDTAGRLHVDDALMEELEQIKSVSHPDEIFLVVDAMTGQDAVNVAGAFNDRLD------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I G+++TK D D + GAALS+ V+G P+ FVG G+ L+ +
Sbjct: 243 ---ITGVIMTKLDG-DTRGGAALSIRSVTGKPIKFVGMGEKMDALEPFH 287
>gi|150021672|ref|YP_001307026.1| signal recognition particle protein [Thermosipho melanesiensis
BI429]
gi|149794193|gb|ABR31641.1| signal recognition particle protein [Thermosipho melanesiensis
BI429]
Length = 435
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 157/295 (53%), Gaps = 35/295 (11%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S F++++GK + + +++ A+K +K L+ +V A+ E ++R L
Sbjct: 9 LSKAFKTLSGKGKITEKNIKEAIKIVKLSLLEADVNYKVVKEFIEDVKKKALGEKVLRSL 68
Query: 363 TP-RRSIDILRD----VHAAKEQRK----PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
TP + I ILRD + K+ K P ++ VG+ G GK+T+ AK+A L +
Sbjct: 69 TPDQMFIKILRDELIKLMGEKQPLKMIHSPSYIMMVGLQGSGKTTSAAKLANLLKKKGRK 128
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
+ A DT+R A++QL T +++ VP++ G K P + +EA++E +G DVV+ DT
Sbjct: 129 PYLVAADTYRPAAIDQLITLGKKIDVPVY-CGDRKHPIKIVEEALKEVKDSGYDVVIFDT 187
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ + +M L ++ + +PD +L V +A+ G DAV+ FN+KL
Sbjct: 188 AGRLHIDNEMMNELVEIKEILSPDEILMVVDAMTGQDAVNSAKTFNEKLD---------- 237
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G ++TK D D + G LS+ YV+ PV F+G G+ DL++ + I +L
Sbjct: 238 VTGFVVTKMDG-DARGGVILSIRYVTNKPVKFIGVGEKIEDLEEFYPERIASRIL 291
>gi|39995748|ref|NP_951699.1| signal recognition particle protein [Geobacter sulfurreducens PCA]
gi|39982512|gb|AAR33972.1| signal recognition particle protein [Geobacter sulfurreducens PCA]
Length = 452
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P ++ VG+ G GK+T+ K+A L + ++ D +R A+EQL+T R+L V
Sbjct: 99 KPPVPIMMVGLQGAGKTTSCGKLARLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVE 158
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F+ ++DP + +EA++ AT NG DVV++DTAGR Q +E LM L ++ P +L
Sbjct: 159 VFDSRADQDPVDICREALRYATLNGFDVVILDTAGRHQIDEYLMNELVRIKEAAEPREIL 218
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A+ G +AV+ S FN +L I G++LTK D D K GAALS+ V+G
Sbjct: 219 FVADAMTGQEAVNVASGFNDRLD----------ITGVVLTKLDG-DAKGGAALSIRAVTG 267
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV VG G+ L+ + +V +L
Sbjct: 268 KPVKLVGVGEKLDALEVFHADRLVSRIL 295
>gi|422301683|ref|ZP_16389048.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
gi|425440580|ref|ZP_18820878.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389718934|emb|CCH97164.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9717]
gi|389789195|emb|CCI14703.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9806]
Length = 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVKPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|297617092|ref|YP_003702251.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144929|gb|ADI01686.1| signal recognition particle protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 447
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 12/196 (6%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P VV+ VG+ G GK+T AK+A LL ++ A D +R A++QL+ + P
Sbjct: 99 KPPTVVMMVGLQGTGKTTTCAKLARSLLAQGRRPLLVAADIYRPAAIKQLQVLGEKCNCP 158
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F G E +P +A+ A++ A NG D+V++DTAGR+ NE LM L L NP +L
Sbjct: 159 VFSMGQE-NPVNIARAALEYARSNGRDIVILDTAGRLHINEELMNELKDLKSSLNPHEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V +A+ G DAV+ S FN++L + G++LTK D D + GAALS+ V+G
Sbjct: 218 LVVDAMTGQDAVNVASSFNEQLG----------LTGVVLTKLDG-DTRGGAALSVKAVAG 266
Query: 561 APVMFVGCGQSYTDLK 576
P+ F G G+ DL+
Sbjct: 267 CPIKFAGVGEKLEDLE 282
>gi|67924644|ref|ZP_00518055.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|416379090|ref|ZP_11683820.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
gi|67853517|gb|EAM48865.1| Signal recognition particle protein [Crocosphaera watsonii WH 8501]
gi|357265970|gb|EHJ14666.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Crocosphaera watsonii WH 0003]
Length = 488
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 121/204 (59%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ ++ P V++ G+ G GK+T AK++ +L + + + +M A D +R A++QL+T
Sbjct: 90 NVPLAQAEKSPTVILMAGLQGTGKTTATAKLSLYLRKQERTCLMVATDIYRPAAIDQLKT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++VP+FE G + +P +A + + +A G D V++DTAGR+Q +E +M L+++
Sbjct: 150 LGEQIEVPVFELGTQANPVDIATQGVAKAKEMGIDTVIIDTAGRLQIDEEMMLELARVKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
NPD L V +A+ G +A + F++++ + G +LTK D D + GAA
Sbjct: 210 AVNPDDTLLVVDAMTGQEAANLTRTFHEQIG----------VTGAILTKMDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALQ 282
>gi|166368109|ref|YP_001660382.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
gi|166090482|dbj|BAG05190.1| signal recognition particle protein [Microcystis aeruginosa
NIES-843]
Length = 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVKPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|425470966|ref|ZP_18849826.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
gi|389883283|emb|CCI36344.1| Signal recognition particle protein [Microcystis aeruginosa PCC
9701]
Length = 478
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQSKSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQINVPVFEMGSQANPVDIARQGVEKAKELGVDTVIIDTAGRLQIDTQMMGELAQIKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ PD L V +A+ G +A + F+Q++ I G +LTK D D + GAA
Sbjct: 210 IVKPDDTLLVVDAMTGQEAASLTNTFHQQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|331269654|ref|YP_004396146.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
gi|329126204|gb|AEB76149.1| signal recognition particle protein [Clostridium botulinum
BKT015925]
Length = 451
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 149/281 (53%), Gaps = 36/281 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
+ + GK L + D++ A++ +K L+ +V + E +++ LTP +
Sbjct: 14 LKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKIVRNFVKTTGEKCLGEEVMKSLTPGQ 73
Query: 367 SI-----DILRDVHAAKEQRKPY------VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ D L+++ + E + + V++ VG+ G GK+T K+A L ++ +
Sbjct: 74 QVVKIVNDELKELMGSTESKIEFSSTGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL+ ++ +P+F G + +P +AK +I+ A N ++VV++DTAG
Sbjct: 134 LVACDIYRPAAIKQLQVVGNQIDIPVFSMGDKVNPVDIAKASIEHAKNNKNNVVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM L + P+ +L V +++ G DAV+ FN KL I
Sbjct: 194 RLHIDEALMDELENIKTSVEPNEILLVVDSMTGQDAVNVSETFNNKLD----------IS 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
G++LTK D D + GAALS+ V+G P+ +VG G+ DL+
Sbjct: 244 GVILTKLDG-DTRGGAALSIKAVTGKPIKYVGLGEKMNDLE 283
>gi|333979545|ref|YP_004517490.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333823026|gb|AEG15689.1| signal recognition particle protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 456
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 148/284 (52%), Gaps = 36/284 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTP-R 365
F+ + K L +AD++ A+K ++ L+ +V A+ + ++ LTP +
Sbjct: 14 FRKLKSKGRLTEADVDEAMKEVRRALLAADVNFQVVKSFVARVKERAVGQDVLSSLTPAQ 73
Query: 366 RSIDILRDVHAAK----------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ I I+RD A + P +V+ VG++G GK+T AK+A + + M
Sbjct: 74 QVIKIVRDELAGLMGGTQSKLNLAPKPPTIVMMVGLHGAGKTTTAAKLANLMRKQGRRPM 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ A D +R A++QL+ +L +P+F G P +A+ A++ A + G D+V++DTAG
Sbjct: 134 LVAGDVYRPAAIKQLQVLGEQLGIPVFSMGDRHTPVDIARAAVEHAVKQGRDLVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R++ NE +M L L P +L V +A+ G AV+ FN++L +D
Sbjct: 194 RLEINEEMMAELETLKAAVRPHEILLVVDAMTGQVAVNIAETFNKRLG----------LD 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
G++LTK D D + GAALS+ V+G P+ FVG G+ L+ +
Sbjct: 244 GVVLTKLDG-DTRGGAALSIKAVTGCPIKFVGVGEKLDALEPFH 286
>gi|326333682|ref|ZP_08199919.1| signal recognition particle protein [Nocardioidaceae bacterium
Broad-1]
gi|325948588|gb|EGD40691.1| signal recognition particle protein [Nocardioidaceae bacterium
Broad-1]
Length = 520
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 147/287 (51%), Gaps = 39/287 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
++ F++I GK L AD++ + ++ L+ +VA A E + + L
Sbjct: 9 LATTFKNIRGKGRLTDADIDATAREIRIALLEADVALPVVREFVARVKERARGEEVSQAL 68
Query: 363 TPRRSI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
P + I D L + + +R P V++ G+ G GK+T AK+A WL +
Sbjct: 69 NPAQQIVKIVNDELVTILGGETRRLRYAKTGPTVIMLAGLQGAGKTTLAAKLALWLKEQG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK---DPAIVAKEAIQEATRNGSDV 468
+ ++ A D R AV QL+ + R+ VP++ +P VA++A++EA R DV
Sbjct: 129 KAPLLVAADLQRPNAVNQLQVNGERVGVPVYAPQPGNGVGNPVDVARDAVEEAKRKLHDV 188
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
V+VDTAGR+ +E LM+ + + NPD VLFV +A++G DAV+ F +
Sbjct: 189 VIVDTAGRLGIDEELMKQAADIKAAVNPDEVLFVVDAMIGQDAVNTAQAFLDGVG----- 243
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
DG++LTK D D + GAALS+V ++G PVMF G+ TD
Sbjct: 244 -----YDGVVLTKLDG-DARGGAALSIVQITGKPVMFASNGEKMTDF 284
>gi|372324774|ref|ZP_09519363.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
gi|366983582|gb|EHN58981.1| Ffh-like signal recognition particle subunit [Oenococcus kitaharae
DSM 17330]
Length = 501
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 37/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T + ++++GK + + DL+ L+ ++ L+ +V A+ ++
Sbjct: 7 TSRIQTAMKNLSGKGKVSEGDLDETLREIRLALLEADVNLKIARSFIAQVREKALGAKVL 66
Query: 360 RILTPRRSI-----DILRDVHAA------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P I D L D+ A K + P V++ G+ G GK+T +AK+A L
Sbjct: 67 EGLNPSEQIIKIVNDQLTDMMGAQAVPLNKSPKIPTVIMMAGLQGAGKTTTVAKLANKLK 126
Query: 409 Q-HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ ++ A D +R A+EQL+T R+L +P+F++G + DP + K+ +++A + +D
Sbjct: 127 NDNHARPLLIAADVYRPAAIEQLQTLGRQLSIPVFDQGTDVDPRQIVKDGLKQADQEKND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
V +DTAGR+Q +E LM+ L + + PD +L +A+ G +A + FN L
Sbjct: 187 YVFIDTAGRLQIDELLMQELKDIEKIAKPDEILLTVDAMTGQNATETAQGFNDALG---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
I G++LTK D D + GAALS+ V+G P+ FVG G+ TDL
Sbjct: 243 ------ITGVVLTKLDG-DTRGGAALSIREVTGKPIKFVGEGEKVTDL 283
>gi|159901134|ref|YP_001547381.1| signal recognition particle protein [Herpetosiphon aurantiacus DSM
785]
gi|159894173|gb|ABX07253.1| signal recognition particle protein [Herpetosiphon aurantiacus DSM
785]
Length = 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 161/299 (53%), Gaps = 38/299 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+ +F + K L ++D++ L+ ++ L+ +V A+ E + + L
Sbjct: 9 LTDVFNRLGSKGRLTESDVDAGLREVRLALLEADVNFKVVKDFVARVREQAIGEEVTKSL 68
Query: 363 TP-RRSIDILRD------------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
TP ++ I I+ D ++ +K + +P +V+ VG+ G GK+T AK+A ++ +
Sbjct: 69 TPGQQVIKIVHDELVHLLGDANVPINESKNREQPTIVMLVGLQGAGKTTMAAKLALYMRK 128
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
+ ++ A D +R A++QL T ++L +P++ +G E P +A+ A+++A NG++ V
Sbjct: 129 KGKTPLLVAADIYRPAAIKQLETLGKQLNIPVYSEGTEVAPPDIAEHALRQARINGNNFV 188
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
+VDTAGR+Q +E LM L +++ P ++ V +A++G ++V F+ K+
Sbjct: 189 IVDTAGRLQIDERLMTELQQVVERIGPTEIMLVVDAMIGQESVKVAEAFHAKVP------ 242
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G+++TK D D + GAALSM V+G P+ F+G G+ ++ + + + +L
Sbjct: 243 ----LTGLIMTKIDG-DARGGAALSMREVTGVPIKFLGTGEKTDAIEPFHPDRLAQRIL 296
>gi|397643867|gb|EJK76129.1| hypothetical protein THAOC_02125 [Thalassiosira oceanica]
Length = 635
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
+P V++FVG+ G GK+T++AK A+ L+ M DTFR+GA +QL+ +A +L+VP
Sbjct: 111 RPNVILFVGLQGAGKTTSIAKFAHHYLRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPF 170
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+ E DP +A+E + ++G +V++VDT+GR + E L + ++ NP +F
Sbjct: 171 YGSYTEADPVSIAEEGVDRFVQDGYEVIIVDTSGRHRQEEGLFEEMQEISAAVNPSNTIF 230
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A G DQ F+ S+ N + +++TK D + G A+S V +G+
Sbjct: 231 VMDATQGQAVYDQARAFH-------SAVN---VGSVIVTKLDG-HARGGGAISAVAATGS 279
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G G+ + DL+ N +S V LL
Sbjct: 280 PIVFLGSGERFEDLEAFNAQSFVSKLL 306
>gi|332289253|ref|YP_004420105.1| cell division protein FtsY [Gallibacterium anatis UMN179]
gi|330432149|gb|AEC17208.1| cell division protein FtsY [Gallibacterium anatis UMN179]
Length = 431
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 122/237 (51%), Gaps = 24/237 (10%)
Query: 358 LVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 417
L IL P +L D +KP+V++ VGVNGVGK+T + K+A Q SVM+A
Sbjct: 207 LATILKPNEQPLVLTD-------KKPFVILMVGVNGVGKTTTIGKLAKQFQQQGKSVMLA 259
Query: 418 ACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRM 477
A DTFR+ AVEQL+ R +P+ + D A V +A+Q AT G D+++ DTAGR+
Sbjct: 260 AGDTFRAAAVEQLQVWGERNHIPVIAQATGADSASVLFDAMQSATAKGVDILIADTAGRL 319
Query: 478 QDNEPLMRALSKLIYL------NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
Q+ LM L K++ + N P ++ +A G +A+ Q+ FN+ +
Sbjct: 320 QNKNNLMDELRKIVRVMKKYDENAPHEIMLTLDAGTGQNAISQMKLFNEAVG-------- 371
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
I GI LTK D K G ++ P+ ++G G+ DL+ N + ++ L
Sbjct: 372 --ITGITLTKLDGT-AKGGVIFALADQFNVPIRYIGVGEKIDDLRPFNSEEFIEALF 425
>gi|427418338|ref|ZP_18908521.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
gi|425761051|gb|EKV01904.1| signal recognition particle subunit FFH/SRP54 (srp54) [Leptolyngbya
sp. PCC 7375]
Length = 493
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 11/197 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
+ KP VV+ G+ G GK+T AK+A L + + S M+ A D +R AV+QL T ++++V
Sbjct: 97 ESKPTVVLMAGLQGTGKTTASAKLALHLRKQERSAMLVATDVYRPAAVDQLITLGKQIKV 156
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+FE G + +P +AK I +A +G D V+VDTAGR+Q ++ +M L ++ +PD V
Sbjct: 157 PVFEMGTDANPVDIAKAGIAKAQEDGVDTVIVDTAGRLQIDQDMMAELEQIKTAISPDEV 216
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
L V +A+ G +A F++++ I G +LTK D D + GAALS+ +S
Sbjct: 217 LLVVDAMTGQEAATLTQTFHEQIG----------ITGAILTKMDG-DSRGGAALSIRQIS 265
Query: 560 GAPVMFVGCGQSYTDLK 576
G P+ F+G G+ L+
Sbjct: 266 GKPIKFIGIGEKVEALQ 282
>gi|336233127|ref|YP_004589873.1| signal recognition particle receptor [Buchnera aphidicola (Cinara
tujafilina)]
gi|335345068|gb|AEH39614.1| signal recognition particle receptor [Buchnera aphidicola (Cinara
tujafilina)]
Length = 231
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 120/203 (59%), Gaps = 17/203 (8%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P++++ +GVNGVGK+T +AK+AY+ H S+M++A DTFR+ A++Q+ ++ ++P+F
Sbjct: 27 PHIILVIGVNGVGKTTTIAKLAYYYKTHGKSIMLSAGDTFRAAAIDQILILGKKYEIPVF 86
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL------IYLNNP 496
K + DPA V ++I+EA SD++++DTAGR+ + L++ L K+ ++ P
Sbjct: 87 SKPFGTDPASVIFDSIREAKNKKSDILIIDTAGRLHNKSHLLQELKKISRIIKKFDISAP 146
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
V+ V +A +G +++ Q F++ + I I++TK D K G S++
Sbjct: 147 HEVILVLDACIGQNSIQQTKLFHKNVP----------ISSIIITKLDG-TAKGGIIFSII 195
Query: 557 YVSGAPVMFVGCGQSYTDLKKLN 579
P+ F+G G+ TDLKK N
Sbjct: 196 DRFKIPICFIGTGEKITDLKKFN 218
>gi|18310695|ref|NP_562629.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110800465|ref|YP_696400.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110802935|ref|YP_699000.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|168207936|ref|ZP_02633941.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|168210654|ref|ZP_02636279.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|168214190|ref|ZP_02639815.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|182625861|ref|ZP_02953627.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|422874634|ref|ZP_16921119.1| signal recognition particle protein [Clostridium perfringens F262]
gi|18145376|dbj|BAB81419.1| signal recognition particle protein [Clostridium perfringens str.
13]
gi|110675112|gb|ABG84099.1| signal recognition particle protein [Clostridium perfringens ATCC
13124]
gi|110683436|gb|ABG86806.1| signal recognition particle protein [Clostridium perfringens SM101]
gi|170660749|gb|EDT13432.1| signal recognition particle protein [Clostridium perfringens E str.
JGS1987]
gi|170711297|gb|EDT23479.1| signal recognition particle protein [Clostridium perfringens B str.
ATCC 3626]
gi|170714291|gb|EDT26473.1| signal recognition particle protein [Clostridium perfringens CPE
str. F4969]
gi|177908895|gb|EDT71387.1| signal recognition particle protein [Clostridium perfringens D str.
JGS1721]
gi|380304275|gb|EIA16564.1| signal recognition particle protein [Clostridium perfringens F262]
Length = 452
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V + VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 101 PTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVF 160
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
G + +AK AI+ A NG++VV++DTAGR+ +E LM+ L + ++NP +L V
Sbjct: 161 SMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELKDVKEVSNPSEILLV 220
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G DAV+ FN L DLS GI+LTK D D + GAALS+ ++G P
Sbjct: 221 VDAMTGQDAVNVAETFNNSL-DLS---------GIILTKLDG-DTRGGAALSIRDITGKP 269
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ +D++
Sbjct: 270 IKFVGVGEKMSDIE 283
>gi|169342711|ref|ZP_02863752.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
gi|169299217|gb|EDS81287.1| signal recognition particle protein [Clostridium perfringens C str.
JGS1495]
Length = 452
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V + VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 101 PTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVF 160
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
G + +AK AI+ A NG++VV++DTAGR+ +E LM+ L + ++NP +L V
Sbjct: 161 SMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELKDVKEVSNPSEILLV 220
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G DAV+ FN L DLS GI+LTK D D + GAALS+ ++G P
Sbjct: 221 VDAMTGQDAVNVAETFNNSL-DLS---------GIILTKLDG-DTRGGAALSIRDITGKP 269
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ +D++
Sbjct: 270 IKFVGVGEKMSDIE 283
>gi|347734048|ref|ZP_08867100.1| signal recognition particle protein [Desulfovibrio sp. A2]
gi|347517140|gb|EGY24333.1| signal recognition particle protein [Desulfovibrio sp. A2]
Length = 515
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 151/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+ +F+ +G LD+A+++ L+ ++ L+ +V + + +++ L
Sbjct: 9 LTGVFRKFSGTGRLDEANIQDGLREVRLALLEADVNFKVVRDFIERVRERCLGQDVLKSL 68
Query: 363 TP-RRSIDILRD-----VHAAKEQ-----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ + I+ D + Q ++PYV++ VG+ G GK+T+ AK+A L + K
Sbjct: 69 TPAQQVVKIVHDELVELLGGGTTQLDLRGKQPYVIMMVGLQGSGKTTSSAKLANLLRKQK 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ +A D +R A++QL T A++L +P + +P +A A+++A +VV+V
Sbjct: 129 MRPYLAPADVYRPAAIDQLHTLAKQLDIPAYPSAPGMNPVDIAAAAVEDAREKQCNVVIV 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM+ L + P +LFV +A+ G DAV FN L
Sbjct: 189 DTAGRLHIDETLMQELVSIKGRVEPQEILFVADAMTGQDAVTVAESFNAALD-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+G PV FVG G+ +D++
Sbjct: 241 --ISGVVLTKMDG-DARGGAALSIRSVTGKPVKFVGMGEKLSDIE 282
>gi|386346818|ref|YP_006045067.1| signal recognition particle protein [Spirochaeta thermophila DSM
6578]
gi|339411785|gb|AEJ61350.1| signal recognition particle protein [Spirochaeta thermophila DSM
6578]
Length = 443
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 152/301 (50%), Gaps = 37/301 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
+ F + +SI GKA + ++E A++ +K L+ +V A E ++
Sbjct: 6 SATFQDIVRSITGKATISPKNIEEAVEQIKYALLEADVHVRVVRRFVNQTIQEATGERVL 65
Query: 360 RILTP-RRSIDILRD--VHAAKEQRKPY---------VVVFVGVNGVGKSTNLAKVAYWL 407
+ +TP ++ + IL D V ++R+ +++ G+ G GK+T AK+A L
Sbjct: 66 KSVTPGQQFVKILYDKLVSFLGDERQDLTLKGPDTLSIILLAGLQGSGKTTTAAKLALHL 125
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ ++ A D R A++QL T + VP++ +KDP V K A+ A R D
Sbjct: 126 KKKGRRPLLVAADLARPAAIDQLETLGASIDVPVYTDRSQKDPRAVVKRALSHAKRQAVD 185
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
++VDTAGR Q + LM LS+L+ +PD L V +A+ G AVD FN+ +
Sbjct: 186 TLIVDTAGRHQVDRELMDELSRLVRDLSPDEALLVADAMTGQTAVDVAKAFNEAVG---- 241
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
I G++LTKFD+ D + GAALS+ ++GAP+ F+G G+ DL+ I +
Sbjct: 242 ------ITGVVLTKFDS-DTRGGAALSIRTITGAPIKFIGVGEKVDDLEPFYPDRIASRI 294
Query: 588 L 588
L
Sbjct: 295 L 295
>gi|266624043|ref|ZP_06116978.1| signal recognition particle protein, partial [Clostridium hathewayi
DSM 13479]
gi|288864130|gb|EFC96428.1| signal recognition particle protein [Clostridium hathewayi DSM
13479]
Length = 327
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 39/289 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
++F+++ GK L +AD++ ALK +K L+ +V+ A+ + ++ L
Sbjct: 10 LQNVFKNLRGKGRLTEADVKAALKEVKMALLEADVSFRVVKQFISAVQERAVGQDVMNSL 69
Query: 363 TP-RRSIDILRD------------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
TP + I I+ + +H K + +++ G+ G GK+T AK+A L
Sbjct: 70 TPGQMVIKIVNEELVNLMGSETTEIHL-KPANEITIIMMAGLQGAGKTTTTAKIAGKLKA 128
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
++AACD +R A++QL+ + + VP+F G PA +AK A++ A++N +VV
Sbjct: 129 KGRKPLLAACDVYRPAAIKQLQINGEKQGVPVFSMGENHKPADIAKAAVEHASKNDQNVV 188
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++DTAGR+ +E +M L ++ + V +A+ G DAV+ FN K+
Sbjct: 189 ILDTAGRLHIDEDMMNELVEIKEAVEVHQTILVVDAMTGQDAVNVAGMFNDKIG------ 242
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
IDG++LTK D D + GAALS+ V+G P++++G G+ +DL++
Sbjct: 243 ----IDGVILTKLDG-DTRGGAALSIRSVTGKPILYIGMGEKLSDLEQF 286
>gi|381179016|ref|ZP_09887879.1| signal recognition particle subunit FFH/SRP54 (srp54) [Treponema
saccharophilum DSM 2985]
gi|380769031|gb|EIC03007.1| signal recognition particle subunit FFH/SRP54 (srp54) [Treponema
saccharophilum DSM 2985]
Length = 443
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 160/303 (52%), Gaps = 37/303 (12%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA---- 357
K T FS + ++++GK+ + + ++E ++ +K L+ +V A +EEA
Sbjct: 4 KITNTFSDIVRTVSGKSTITEKNIEETVEQIKMALLEADVNLRVVRRFVNATIEEAKGEK 63
Query: 358 LVRILTP---------RRSIDILRDVHAAKEQRKP---YVVVFVGVNGVGKSTNLAKVAY 405
++R + P R + +L D + ++P VV+ +G+ G GK+T K+A
Sbjct: 64 VLRAVDPGQQFVKIIYDRIVKMLGDTKVDLQLKEPNSQSVVLLLGLQGAGKTTAAHKLAA 123
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
L+++ ++ ACD R AVEQLR ++ VP++ + EK+ VA+ + A +NG
Sbjct: 124 RLVKNGRRPLLVACDLVRPAAVEQLRQLGEKINVPVYFEDGEKNAVKVAQGGLSFAKKNG 183
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
D V+VDTAGR+Q +E +M L + P + V +A+ G +AVD F+++L
Sbjct: 184 YDTVIVDTAGRLQIDEAMMAELVDVKKAVAPVETILVADAMTGQNAVDIAKSFDEQLG-- 241
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
+ G++LTKFD+ D + GAALS+ ++ P++F+G G+ D + + + I
Sbjct: 242 --------LTGVILTKFDS-DARGGAALSLKTITNKPILFIGTGEKTEDFEPFHPERIAS 292
Query: 586 TLL 588
+L
Sbjct: 293 RIL 295
>gi|253681736|ref|ZP_04862533.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
gi|253561448|gb|EES90900.1| signal recognition particle protein [Clostridium botulinum D str.
1873]
Length = 451
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 149/281 (53%), Gaps = 36/281 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
+ + GK L + D++ A++ +K L+ +V + E +++ LTP +
Sbjct: 14 LKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKIVRNFVKTTGEKCLGEEVMKSLTPGQ 73
Query: 367 SI-----DILRDVHAAKEQRKPY------VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ D L+++ + E + + V++ VG+ G GK+T K+A L ++ +
Sbjct: 74 QVVKIVNDELKELMGSTESKIEFSSTGLTVIMLVGLQGAGKTTMAGKLALQLRKNNKKPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL+ ++ +P+F G + +P +AK +I+ A N ++VV++DTAG
Sbjct: 134 LVACDIYRPAAIKQLQVVGSQIDIPVFSMGDKVNPVDIAKASIEHAKNNKNNVVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM L + P+ +L V +++ G DAV+ FN KL I
Sbjct: 194 RLHIDEALMDELENIKTSVKPNEILLVVDSMTGQDAVNVSETFNDKLD----------IS 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
G++LTK D D + GAALS+ V+G P+ +VG G+ DL+
Sbjct: 244 GVILTKLDG-DTRGGAALSIKAVTGKPIKYVGLGEKMNDLE 283
>gi|225180938|ref|ZP_03734386.1| signal recognition particle protein [Dethiobacter alkaliphilus AHT
1]
gi|225168419|gb|EEG77222.1| signal recognition particle protein [Dethiobacter alkaliphilus AHT
1]
Length = 448
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 117/188 (62%), Gaps = 12/188 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ VG+ G GK+T+ AK++ L + + S ++ A D +R A++QL+ +L+VP++
Sbjct: 101 PTVIMMVGLQGSGKTTSAAKLSNLLKKKQHSPLLVAADIYRPAAIKQLQVLGEQLEVPVY 160
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+ G ++DP AK A+++A RN +D V++DTAGR+ +E LM L+++ NPD +L V
Sbjct: 161 QMG-QQDPVQTAKAALEQAKRNRNDYVIIDTAGRLHIDEELMAELTRIEKAVNPDEILLV 219
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G DAV+ F +KL + G++LTK D D + GAALS+ V+G P
Sbjct: 220 VDAMTGQDAVNVAQSFKEKLG----------LSGVVLTKLDG-DTRGGAALSVRAVTGCP 268
Query: 563 VMFVGCGQ 570
V F G G+
Sbjct: 269 VKFAGLGE 276
>gi|354559586|ref|ZP_08978833.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353541223|gb|EHC10692.1| signal recognition particle protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 465
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 12/196 (6%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P V++ VG+ G GK+T+ AK+A L + +M ACD +R AV+QL+ +++VP
Sbjct: 98 KPPTVILLVGLQGAGKTTHAAKLATLLKKQGKHPLMVACDIYRPAAVKQLQVLGEQIKVP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F E +P +A+E+I+ A G DVV++DTAGR+ NE LM L + P +L
Sbjct: 158 VFSIDGE-NPVKIAQESIRHANSQGQDVVIIDTAGRLHINEELMGELRDIKATVRPHEIL 216
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V +A+ G DAV+ F+ +L +DGI+LTK D D + GAALS+ V+G
Sbjct: 217 LVVDAMTGQDAVNVAESFHSELG----------VDGIILTKLDG-DTRGGAALSIKAVTG 265
Query: 561 APVMFVGCGQSYTDLK 576
P+ F G G+ L+
Sbjct: 266 CPIKFAGIGEKMEALE 281
>gi|339625133|ref|ZP_08660922.1| signal recognition particle protein [Fructobacillus fructosus KCTC
3544]
Length = 489
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 149/288 (51%), Gaps = 37/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLM---------TKNVAAMEEAL--VRIL 362
T S +++ GK + + DL+ +LK ++ L+ K +AA+ E IL
Sbjct: 7 TERLSKALKNLTGKGKIHEEDLQASLKEIRLALLEADVSYPTVKKFIAAIREKAKGAEIL 66
Query: 363 ----TPRRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
P++ + I+ D V K + P V++ G+ G GK+T +AK+AY L
Sbjct: 67 DGLNAPQQVVKIVNDELTALMGEEAVPLNKSDKIPTVIMMAGLQGAGKTTTVAKLAYKLK 126
Query: 409 -QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
++K ++ A D +R A++QL + L +P+F +G + DP + K +++A N +D
Sbjct: 127 KENKARPLLIAADVYRPAAIDQLEVLGKDLDIPVFSEGTDVDPREIVKHGLKQAEANKND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
V +DTAGR+Q +E LM L + + PD +L +A+ G +A + F L DL+
Sbjct: 187 YVFIDTAGRLQIDETLMTELKDIATIAQPDEILLTVDAMTGQNATETAEGFANAL-DLT- 244
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
G++LTK D D + GAALS+ V+G P+ FVG G+ TDL
Sbjct: 245 --------GVVLTKLDG-DTRGGAALSIRDVTGKPIKFVGQGEKPTDL 283
>gi|450052707|ref|ZP_21841379.1| signal recognition particle protein [Streptococcus mutans NFSM1]
gi|56968646|gb|AAW32279.1| Ffh [Streptococcus mutans]
gi|449200130|gb|EMC01176.1| signal recognition particle protein [Streptococcus mutans NFSM1]
Length = 516
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P ++V VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIVMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|403383367|ref|ZP_10925424.1| signal recognition particle-like (SRP) component [Kurthia sp. JC30]
Length = 455
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 119/209 (56%), Gaps = 12/209 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
R P V++ VG+ G GK+T K+A L + + ++ A D +R AV+QL+T ++L +
Sbjct: 99 RPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADVYRPAAVKQLQTLGKQLSI 158
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+FEKG E P +A++AI+ A DVV++DTAGR+ +E LM+ L + L PD V
Sbjct: 159 PVFEKGTEVSPVDIARDAIEFAKEEHHDVVIIDTAGRLHIDEALMQELKDIRALKEPDEV 218
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
V +A+ G DAV+ FN + I G++LTK D D + GAALS+ V+
Sbjct: 219 FLVVDAMTGQDAVNVAESFNDAVG----------ITGVVLTKLDG-DTRGGAALSIRSVT 267
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+ FVG G+ L+ + + + + +L
Sbjct: 268 EKPIKFVGMGEKMDALEPFHPERMAQRIL 296
>gi|339499127|ref|YP_004697162.1| signal recognition particle protein [Spirochaeta caldaria DSM 7334]
gi|338833476|gb|AEJ18654.1| signal recognition particle protein [Spirochaeta caldaria DSM 7334]
Length = 453
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 155/291 (53%), Gaps = 37/291 (12%)
Query: 312 KKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA---- 357
K TG ++I GKA + + ++E A++A+K L+ +V + +EEA
Sbjct: 4 KLTGKIQDALRTINGKATITEKNIEDAVEAIKMALLEADVNLRVVRRFVNSTIEEAKGER 63
Query: 358 LVRILTP-RRSIDILRDVHAA-----------KEQRKPYVVVFVGVNGVGKSTNLAKVAY 405
++R + P ++ I I+ D A K V++ +G+ G GK+T+ AK+A
Sbjct: 64 VLRSVDPGQQFIKIVHDKLVAFLGDAKQDLNLKGPDTQSVILMLGLQGSGKTTSSAKLAL 123
Query: 406 WLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNG 465
L + V++ ACD R A+EQL ++ VP++++ KDP V K A++ A +N
Sbjct: 124 RLKKEGRKVLLVACDLIRPAAIEQLSVLGSQIGVPVYKEEGAKDPVKVYKGALETARKNL 183
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
D ++VDT GR+Q ++ +M L +L PD +L V +A+ G AVD F++++
Sbjct: 184 YDTIIVDTTGRLQIDQEMMTELVRLRDAAKPDELLLVADAMTGQSAVDIAKAFDEQIG-- 241
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G++LTKFD+ D + GAALS+ ++G P+ FVG G+ D +
Sbjct: 242 --------LTGVILTKFDS-DTRGGAALSLKTITGKPLKFVGVGEKPEDFE 283
>gi|427730772|ref|YP_007077009.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
gi|427366691|gb|AFY49412.1| signal recognition particle subunit FFH/SRP54 (srp54) [Nostoc sp.
PCC 7524]
Length = 489
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V + ++KP +V+ G+ G GK+T AK+A L + + S ++ A D +R A++QL T
Sbjct: 90 NVPLTETEQKPTIVLMAGLQGTGKTTATAKLALHLRKLERSCLLVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + DP +A++ ++ A G + V++DTAGR+Q +E +M L+++
Sbjct: 150 LGKQIDVPVFELGSDADPVEIARQGVERAKAEGVNTVIIDTAGRLQIDEDMMAELARIKA 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
PD L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 TVQPDETLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKLDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SGAP+ FVG G+ L+
Sbjct: 259 LSVRQISGAPIKFVGVGEKVEALQ 282
>gi|354584950|ref|ZP_09003841.1| signal recognition particle protein [Paenibacillus lactis 154]
gi|353191067|gb|EHB56576.1| signal recognition particle protein [Paenibacillus lactis 154]
Length = 459
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 11/212 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK + P V++ G+ G GK+T K+A L + ++ A D +R A++QL+ +
Sbjct: 95 AKSSKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIKQLQVLGEQ 154
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
++VP+F G + P +AK+ +Q A NG D V++DTAGR+ +E LM L ++ NP
Sbjct: 155 IKVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSAVNP 214
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D VL V +A+ G DAV+ FNQ+L + G++LTK D D + GAALS+
Sbjct: 215 DEVLLVVDAMTGQDAVNVAESFNQQLT----------LTGVVLTKLDG-DTRGGAALSVK 263
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P+ F G+ L+ + + + +L
Sbjct: 264 AVTGCPIKFAALGEKIDALEPFHPERMASRIL 295
>gi|218132452|ref|ZP_03461256.1| hypothetical protein BACPEC_00311 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992562|gb|EEC58564.1| signal recognition particle protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 452
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 152/289 (52%), Gaps = 37/289 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
++F+++ GK L ++D++ AL+ +K L+ +V A+ + ++ L
Sbjct: 10 LQNIFKNLRGKGRLSESDVKAALREVKMALLEADVNFKVVKQFVKSVEERAIGQDVMESL 69
Query: 363 TP-RRSIDILRDVH-----------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
TP + I I+ + A K + V++ G+ G GK+T AK+A
Sbjct: 70 TPGQMVIKIVNEEMIKLMGSETTEIALKSGSEITVIMMAGLQGAGKTTTTAKLAGKFKAQ 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R AVEQL+ + + VP+F G ++P +AK I+ A NG+++V+
Sbjct: 130 GRKPLLVACDVYRPAAVEQLKINGEKQGVPVFAMGTNQNPVDIAKAGIEHAKSNGNNIVI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +E +M L + D + V +++ G DAV+ S F++K+
Sbjct: 190 LDTAGRLHVDEDMMTELQNIKSSVGVDQTILVVDSMTGQDAVNVASSFDEKIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
IDG++LTK D D + GAALS+ V+G P+++ G G+ +DL++ +
Sbjct: 243 ---IDGVILTKLDG-DTRGGAALSIKAVTGKPILYAGMGEKLSDLEQFH 287
>gi|352085402|ref|ZP_08953022.1| signal recognition particle-docking protein FtsY [Rhodanobacter sp.
2APBS1]
gi|351681823|gb|EHA64937.1| signal recognition particle-docking protein FtsY [Rhodanobacter sp.
2APBS1]
Length = 384
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
R+P+VV+ VG+NG GK+T + K+A K +VM+AA DTFR+ AVEQL+T R VP
Sbjct: 170 RQPFVVLVVGINGAGKTTTIGKLARRWSDEKRAVMLAAGDTFRAAAVEQLKTWGERNAVP 229
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------N 494
+ +G + D A V +A+Q A G+DV++ DTAGR+ LM L K+ + +
Sbjct: 230 VISQGQDADAASVIFDALQAARSRGADVLIADTAGRLHTQGGLMDELGKIARVLKKLDAD 289
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
P VL V + G +AV Q+ +F Q + + G+++TK D K G +
Sbjct: 290 APHEVLMVIDGTTGQNAVSQVRQFRQIVG----------VTGLVVTKLDGT-AKGGVVFA 338
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G P+ FVG G+S TDL+ + V LL
Sbjct: 339 LAREFGLPIRFVGLGESATDLRVFEAAAFVDGLL 372
>gi|377831263|ref|ZP_09814244.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
gi|377554941|gb|EHT16639.1| sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus mucosae LM1]
Length = 483
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L + M A D +R A+ QL+ A ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNEENARPMFIAADVYRPAAITQLQQVADQIGVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FE+G EKDP + ++ +++A +N +D V++DTAGR+Q +E LM L + L P+ +L
Sbjct: 161 FEEGTEKDPVDIVRDGMEQAKQNHNDYVIIDTAGRLQIDEQLMDELVNIKNLTQPNEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G +AV FN KL I G++LTK D D + GAA+S+ V+G
Sbjct: 221 VVDAMTGQNAVKTAQGFNDKLD----------ITGVVLTKLDG-DTRGGAAMSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGEGEKMEDL 283
>gi|389798092|ref|ZP_10201119.1| signal recognition particle-docking protein FtsY [Rhodanobacter sp.
116-2]
gi|388445747|gb|EIM01805.1| signal recognition particle-docking protein FtsY [Rhodanobacter sp.
116-2]
Length = 384
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
R+P+VV+ VG+NG GK+T + K+A K +VM+AA DTFR+ AVEQL+T R VP
Sbjct: 170 RQPFVVLVVGINGAGKTTTIGKLARRWSDEKRAVMLAAGDTFRAAAVEQLKTWGERNAVP 229
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------N 494
+ +G + D A V +A+Q A G+DV++ DTAGR+ LM L K+ + +
Sbjct: 230 VISQGQDADAASVIFDALQAARSRGADVLIADTAGRLHTQGGLMDELGKIARVLKKLDAD 289
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
P VL V + G +AV Q+ +F Q + + G+++TK D K G +
Sbjct: 290 APHEVLMVIDGTTGQNAVSQVRQFRQIVG----------VTGLVVTKLDGT-AKGGVVFA 338
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G P+ FVG G+S TDL+ + V LL
Sbjct: 339 LAREFGLPIRFVGLGESATDLRVFEAAAFVDGLL 372
>gi|373106124|ref|ZP_09520428.1| signal recognition particle protein [Stomatobaculum longum]
gi|371653220|gb|EHO18624.1| signal recognition particle protein [Stomatobaculum longum]
Length = 450
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 150/291 (51%), Gaps = 37/291 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------AAMEEALV----- 359
T +F+ + GK L +AD + ALK ++ L+ +V ++EE V
Sbjct: 7 TEKLQRVFRDLRGKGKLSEADTKAALKEVRMALLEADVNFKVVKQFVKSIEERAVGAEVL 66
Query: 360 RILTPRRSIDILRDVHAAK------------EQRKPYVVVFVGVNGVGKSTNLAKVAYWL 407
LTP + + + + K + R V++ G+ G GK+T AK+A L
Sbjct: 67 ESLTPGQQVVKIVNEELIKLMGSETTEIKMAQDRDITVILMAGLQGAGKTTTAAKLAGKL 126
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
++AACD +R A+EQLR + ++ VP+F G DP +A+ A ++A ++ +D
Sbjct: 127 KAKGHRPLLAACDVYRPAAIEQLRVNGEKVGVPVFSMGSGVDPVNIARAAFEKARQDHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
+++VDTAGR+Q +E +M L ++ D L +A+ G +AV+ F K+
Sbjct: 187 ILIVDTAGRLQIDEQMMEELGRIKEALRADWTLLTVDAMTGQEAVNVAKTFEDKVG---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
+DG+++TK D D + GAALS+ V+G P++FVG G+ +DL++
Sbjct: 243 ------VDGVIVTKLDG-DTRGGAALSIKAVTGKPILFVGMGEKLSDLEQF 286
>gi|325290414|ref|YP_004266595.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
gi|324965815|gb|ADY56594.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 152/297 (51%), Gaps = 37/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+ F+ + GK L +AD+ A++ ++ L+ +V A+ + ++ L
Sbjct: 11 LQATFKRLKGKGKLTEADVNEAMREVRVALLEADVNFKVVKDLIAKIKERAVGQEVLESL 70
Query: 363 TP-RRSIDILRDVHAAK----------EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP + I I+ + A + P VV+ VG+ G GK+T+ AK+A L +
Sbjct: 71 TPGQHVIKIVNEEMVAMMGGSESKLAISSKPPTVVMLVGLQGAGKTTHGAKLANMLKKQG 130
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ ACD +R A++QL+ +++VP+F G E +P +A E++ A +NG D V++
Sbjct: 131 KHPLLVACDIYRPAAIKQLQVLGEQIKVPVFSLGQE-NPVKIAGESLDYAGKNGHDTVII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ NE LM L + + P +L V +A+ G DAV+ FN KLA
Sbjct: 190 DTAGRLHINEELMGELEDIKAVVQPHEILLVVDAMTGQDAVNVAETFNSKLA-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++L+K D D + GAA+S+ V+G P+ + G G+ L+ +V +L
Sbjct: 242 --LSGVILSKLDG-DTRGGAAISVRSVTGCPIKYAGVGEKMDALEVFYPDRMVSRIL 295
>gi|350271206|ref|YP_004882514.1| signal recognition particle protein [Oscillibacter valericigenes
Sjm18-20]
gi|348596048|dbj|BAL00009.1| signal recognition particle protein [Oscillibacter valericigenes
Sjm18-20]
Length = 450
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 118/189 (62%), Gaps = 13/189 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+TN AK+A +L Q+ ++ ACD +R AVEQL+ +L +P+
Sbjct: 101 PTVIMLVGLQGAGKTTNGAKLAGYLRKQYGKRPLLVACDVYRPAAVEQLKVVGGQLDLPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+++G + DP +A+ A++ A +G+D+VL+DTAGR+ +E LM L ++ P+ +L
Sbjct: 161 YDEG-QGDPVRIAENALRHARDHGNDLVLLDTAGRLHVDEALMDELRRMKAAVRPNDILL 219
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G DAV+ S F++ L IDG++LTK D D + GAALS+ V+G
Sbjct: 220 VVDAMTGQDAVNAASAFDEALG----------IDGVMLTKLDG-DARGGAALSIRAVTGK 268
Query: 562 PVMFVGCGQ 570
P+ F G G+
Sbjct: 269 PIKFAGTGE 277
>gi|395238273|ref|ZP_10416210.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477845|emb|CCI86187.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
Length = 476
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWL--LQHKVSVMMAACDTFRSGAVEQLRTHAR 435
K + P +V+ VG+ G GK+T + K+AY L +H +++A D +R AV+QL+ +
Sbjct: 96 KSKHIPTIVMMVGLQGTGKTTTVGKLAYHLQKTEHARPLLIAG-DIYRPAAVDQLKQIGQ 154
Query: 436 RLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN 495
+L VP++ + EKD + + + EA +N +D VL+DTAGR++ +EPLM L K+ + +
Sbjct: 155 QLNVPVYSEENEKDVSQIVARGLAEADKNKNDYVLIDTAGRLEIDEPLMEELEKVKAVAH 214
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
PD +L V +A+ G A D F+++L + G++LTK D D + GAALS+
Sbjct: 215 PDNILLVVDAMTGQAATDVAKGFDERLD----------VTGVILTKLDG-DTRGGAALSI 263
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P+++ G G+ TDL+ + + +L
Sbjct: 264 RAVTGKPIIYTGQGEKLTDLEDFHPDRMASRIL 296
>gi|126658775|ref|ZP_01729919.1| signal recognition particle protein [Cyanothece sp. CCY0110]
gi|126619873|gb|EAZ90598.1| signal recognition particle protein [Cyanothece sp. CCY0110]
Length = 488
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + + S +M A D +R A++QL T
Sbjct: 90 NVPLAQAENAPTVILMAGLQGTGKTTATAKLALYLRKQQRSALMVATDIYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++ VP+FE G + +P +A + +++A G D V++DTAGR+Q +E +M LS++
Sbjct: 150 LGEQIDVPVFELGNQANPVDIATQGVEKAKEMGIDTVIIDTAGRLQIDEEMMLELSRVKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
NPD L V +A+ G +A + F+ ++ + G +LTK D D + GAA
Sbjct: 210 AVNPDDTLLVVDAMTGQEAANLTRTFHDQIG----------VTGAILTKMDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALQ 282
>gi|284045135|ref|YP_003395475.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
gi|283949356|gb|ADB52100.1| signal recognition particle protein [Conexibacter woesei DSM 14684]
Length = 444
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 121/207 (58%), Gaps = 12/207 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ G+ G GK+T AK+A L Q++ SV +AACD +R AVEQL T R +
Sbjct: 100 PTVILMAGLQGSGKTTATAKLARLLREQNRSSVAVAACDVYRPAAVEQLITVGARAGADV 159
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+E+G + DP +AK A + A R G DV++VDTAGR+ +E LM+ L+++ + NP VL
Sbjct: 160 YERGTDADPVEIAKWARERAEREGKDVLIVDTAGRLHVDENLMKELAEIKRVTNPTNVLL 219
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G DAV+ +F + + DG++++K D D + GAALS+ V+G
Sbjct: 220 VVDAMTGQDAVNVAEQFAEVVQ----------FDGVVMSKLDG-DARGGAALSVKSVTGK 268
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F G+ ++ + + + +L
Sbjct: 269 PILFASTGEKLDQFERFHPDRMAQRIL 295
>gi|261408023|ref|YP_003244264.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
gi|261284486|gb|ACX66457.1| signal recognition particle protein [Paenibacillus sp. Y412MC10]
Length = 460
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK + P V++ G+ G GK+T K+A L + ++ A D +R A++QL +
Sbjct: 95 AKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSKPLLVAGDIYRPAAIKQLEVLGNQ 154
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F G + P +AK+ +Q A NG D V++DTAGR+ +E LM L ++ + NP
Sbjct: 155 INVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSVVNP 214
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D VL V +A+ G DAV+ FNQ+L + G++LTK D D + GAALS+
Sbjct: 215 DEVLLVVDAMTGQDAVNVAESFNQQLT----------LTGVVLTKLDG-DTRGGAALSVK 263
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P+ F G+ L+ + + + +L
Sbjct: 264 AVTGCPIKFAALGEKIDALEPFHPERMASRIL 295
>gi|389843106|ref|YP_006345186.1| signal recognition particle-docking protein FtsY [Mesotoga prima
MesG1.Ag.4.2]
gi|387857852|gb|AFK05943.1| signal recognition particle-docking protein FtsY [Mesotoga prima
MesG1.Ag.4.2]
Length = 303
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 29/261 (11%)
Query: 336 EPALKALKDRL--MTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNG 393
E ++ALKDR + + ++E LV IL D+ Q +PYVV VGVNG
Sbjct: 54 EEVIEALKDRKDKGKEPIEVLKEVLVEIL----------DIPFEVPQARPYVVSVVGVNG 103
Query: 394 VGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIV 453
GK+T + K++ + V++AACDTFR+ AVEQLR + R V +G D A V
Sbjct: 104 TGKTTTIGKLSKLYSSNGNKVVLAACDTFRAAAVEQLRIWSERANVDFISQGQGADSAAV 163
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALV 507
A +A++ A G DVV+VDTAGR+ LM L K+ + P+ VL V +A
Sbjct: 164 AFDAVRHAVSKGKDVVIVDTAGRLHTRSNLMEELKKVHRVIGKASPGAPNEVLLVIDATT 223
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
G + + Q KF + + + GI+LTK D K G ++V G PV ++G
Sbjct: 224 GQNGLVQAKKFKEAVD----------VTGIVLTKLDGT-AKGGIIFAIVKELGIPVRYIG 272
Query: 568 CGQSYTDLKKLNVKSIVKTLL 588
G+ DLK + + V LL
Sbjct: 273 VGEKEDDLKPFDSREFVNALL 293
>gi|335429766|ref|ZP_08556664.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
gi|334889776|gb|EGM28061.1| signal recognition particle protein [Haloplasma contractile
SSD-17B]
Length = 472
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 147/279 (52%), Gaps = 41/279 (14%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
+ + GK L++ D+E ++ ++ L+ +V A+ E +++ L+P +
Sbjct: 14 LKKVTGKGKLNEKDIENMMREVRLSLLEADVNYKVVKQFTNEVKEKALGEKVLKSLSPGQ 73
Query: 367 SIDILRDVHAAKEQ-------------RKPYVVVFVGVNGVGKSTNLAKVA-YWLLQHKV 412
+ ++ VH +Q V++ VG+ G GK+T+ K+A Y +H
Sbjct: 74 QV--VKIVHEELKQLMGEDAHGVAFKGHGTTVIMLVGLQGAGKTTHAGKLANYMRKKHNK 131
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+M A D +R A++QL T ++L VP+F G + P +AK+A+Q+AT N +D+V++D
Sbjct: 132 KPLMVAADIYRPAAIDQLETVGKQLNVPVFSMGTDVSPVEIAKKALQQATENKNDLVIID 191
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ +E LM L ++ + PD +L +A+ G DAV F+++L
Sbjct: 192 TAGRLHIDEALMDELQQVKEIAKPDEILLTVDAMTGQDAVTVADSFHKQLN--------- 242
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
+ G +LTK D D + GAALS+ V+G P+ F+G G+
Sbjct: 243 -VTGAILTKLDG-DTRGGAALSIRKVTGVPIKFMGLGEQ 279
>gi|402846077|ref|ZP_10894395.1| signal recognition particle-docking protein FtsY [Porphyromonas sp.
oral taxon 279 str. F0450]
gi|402268408|gb|EJU17779.1| signal recognition particle-docking protein FtsY [Porphyromonas sp.
oral taxon 279 str. F0450]
Length = 317
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 313 KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------MEEALVR--- 360
K FS + +++AG++ +D + L L+D L+T +V +EE + R
Sbjct: 23 KENVFSKLARAVAGRSTVD----DSVLDELEDVLVTSDVGVETTLKIIRRIEERVARDKY 78
Query: 361 ----------------ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVA 404
+LT S D + A +KPYV++ VGVNGVGK+T + K+A
Sbjct: 79 VSTSELTGILRSEIASLLTENGSTD--GESFALPAGKKPYVIMVVGVNGVGKTTTIGKLA 136
Query: 405 YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRN 464
Y Q SVM+ A DTFR+ A+EQL A+R+ VPI + DPA VA + + A +
Sbjct: 137 YQFKQQGYSVMLGAGDTFRAAAIEQLDIWAKRVDVPIIRQHMSADPASVAFDTLSAAVKA 196
Query: 465 GSDVVLVDTAGRMQDNEPLMRALSKL------IYLNNPDLVLFVGEALVGNDAVDQLSKF 518
G+DVV++DTAGR+ + LM L+K+ + + PD VL V + G +A +Q +F
Sbjct: 197 GTDVVIIDTAGRLHNKVGLMNELTKIRRVMQKVVPDAPDEVLLVLDGSTGQNAFEQAKQF 256
Query: 519 NQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
++ + +TK D K G + + PV ++G G+ DL+
Sbjct: 257 TAATE----------VNALAITKLDGT-AKGGVVIGISDQFKIPVKYIGLGEGIEDLQLF 305
Query: 579 NVKSIVKTLL 588
K V +L
Sbjct: 306 RKKEFVDSLF 315
>gi|414154258|ref|ZP_11410577.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454049|emb|CCO08481.1| Signal recognition particle protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 446
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%), Gaps = 37/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------------AAMEEALVRI 361
+F+S+ GK L + D+ A++ +K L+ +V A ++ L +
Sbjct: 9 LDEIFKSLKGKGRLTEEDVNQAMREVKMALLEADVNFKVVKEFVAQVKERAVGQDVLASL 68
Query: 362 LTPRRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
++ I I++D + P +++ VG+ G GK+T K+A L +
Sbjct: 69 SPAQQVIKIVKDELTELLGGTQAKINMAAKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R A++QL+ +LQ+P+F G E +P +A+ A+ +A G DVV++
Sbjct: 129 RRPLLVAADIYRPAAIKQLQVLGEQLQIPVFSLGQE-NPVKIAQAAVDQAGSTGKDVVII 187
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ NE LM L+++ P +L V +A+ G +AV+ FN+KL
Sbjct: 188 DTAGRLHINEELMGELAEIKTAVKPHEILLVVDAMTGQEAVNVADTFNRKLG-------- 239
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+DGI++TK D D + GAALS+ V+G P+ F G G+ L+ +
Sbjct: 240 --LDGIIMTKLDG-DARGGAALSVRKVTGTPIKFAGMGEKLDALEPFH 284
>gi|397904685|ref|ZP_10505586.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
gi|397162281|emb|CCJ32920.1| Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Caloramator australicus RC3]
Length = 459
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 148/289 (51%), Gaps = 40/289 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T F+ + GK L + D++ A++ +K L+ +V A+ + ++
Sbjct: 7 THKLQETFKKLRGKGKLSEKDVKDAMREVKLALLEADVNYKVVKDFINVVTERAIGQEVM 66
Query: 360 RILTPRRSIDILRDVHAAK-------------EQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
LTP + + ++ VH + P V++ VG+ G GK+T AK+A
Sbjct: 67 ESLTPAQQV--IKIVHEEMIKLMGSTESKINISPKPPTVIMLVGLQGAGKTTMAAKLALH 124
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
L ++ ++ A D +R A++QL+ ++ +P+F G + +P +AK +++ A +N
Sbjct: 125 LRKNNKHPLLVAADIYRPAAIKQLQILGGQIDIPVFTLGDKVNPVDIAKASLEYAKKNAK 184
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
D+V++DTAGR+ +E LM L + NPD +L V +A+ G DAV+ FN KL
Sbjct: 185 DIVIIDTAGRLHIDEELMLELEGIKKEVNPDEILLVVDAMTGQDAVNVAQSFNDKLD--- 241
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
I G++LTK D D + GAALS+ V+G P+ + G G+ +DL
Sbjct: 242 -------ITGVILTKLDG-DTRGGAALSVKAVTGKPIKYAGVGEKLSDL 282
>gi|386393391|ref|ZP_10078172.1| signal recognition particle protein [Desulfovibrio sp. U5L]
gi|385734269|gb|EIG54467.1| signal recognition particle protein [Desulfovibrio sp. U5L]
Length = 499
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 154/290 (53%), Gaps = 40/290 (13%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T +F+ I G A L + +++ AL+ ++ L+ +V AM + ++
Sbjct: 6 TDRLDDVFRKIRGHARLTEENVQTALREVRLALLEADVNFKVVKDFVERVRERAMGQDVL 65
Query: 360 RILTPRRSIDILRDVHA---------AKE---QRKPYVVVFVGVNGVGKSTNLAKVAYWL 407
+ LTP + + ++ VH A+E + P V++ VG+ G GK+T AK+A L
Sbjct: 66 KSLTPGQQV--VKIVHEEMIELLGGKAQELDLKASPAVIMVVGLQGSGKTTTCAKLALKL 123
Query: 408 LQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
+ K + D +R A+EQL A +L +P F ++ P + A++EA R+G
Sbjct: 124 RREFKRKPYLVPADVYRPAAIEQLHKLASQLDIPAFPSTPDQKPVDICLAALEEARRSGH 183
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVL+DTAGR+ ++ LM L+ + + NP +LFV +A+ G DAV + FN++L D+S
Sbjct: 184 DVVLLDTAGRLHIDQTLMDELAAIKAVTNPGEILFVADAMTGQDAVTVAAAFNERL-DVS 242
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
GI+LTK D D + GAALS+ V+G + FVG G+ DL+
Sbjct: 243 ---------GIVLTKMDG-DARGGAALSVRQVTGKAIKFVGTGEKVADLE 282
>gi|218441087|ref|YP_002379416.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
gi|218173815|gb|ACK72548.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
Length = 488
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
++ AK P V++ G+ G GK+T AK+A +L + K + +M A D +R A++QL T
Sbjct: 90 NIPLAKASTPPTVILMAGLQGTGKTTATAKLALFLRKEKRTCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++++VP+FE G + DP +A+ +++A G D V++DTAGR+Q ++ +M L+++
Sbjct: 150 LGQQIEVPVFEMGTDADPVEIARLGVEKAKELGVDTVIIDTAGRLQIDQDMMGELARIKA 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
PD L V +A+ G +A F++++ I G +LTK D D + GAA
Sbjct: 210 TVKPDDTLLVVDAMTGQEAATLTHTFHEQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ VSG P+ FVG G+ L+
Sbjct: 259 LSVRQVSGQPIKFVGVGEKVEALQ 282
>gi|406838051|ref|ZP_11097645.1| Signal recognition particle protein, partial [Lactobacillus vini
DSM 20605]
Length = 391
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 120/203 (59%), Gaps = 12/203 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRT 432
V +K + P +++ VG+ G GK+T LAK+A L + K +M A D +R A++QL++
Sbjct: 92 VPLSKAAKIPTIIMMVGLQGAGKTTTLAKLALKLKTEKKARPLMIAGDIYRPAAIDQLQS 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++++VP+F G + P + ++ + A +D VL+DTAGR+Q +E LM L+++
Sbjct: 152 LGQQIEVPVFSLGTDTSPVEIVRQGLASAAEKKNDYVLIDTAGRLQIDEKLMAELAQIKA 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L PD +L +A+ G +AV+ FN++L + G++LTK D D + GAA
Sbjct: 212 LAQPDEILLTVDAMTGQNAVEVAKGFNEQLD----------VTGVVLTKLDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDL 575
LS+ V+G P+ F+G G+ TDL
Sbjct: 261 LSIRAVTGKPIKFIGQGEKMTDL 283
>gi|366085823|ref|ZP_09452308.1| signal recognition particle protein [Lactobacillus zeae KCTC 3804]
Length = 478
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ G+ G GK+T + K+A +L+ + K ++ A D +R A++QL+T ++L VP+
Sbjct: 101 PTVIMMAGLQGAGKTTTVGKLAKYLMDNEKARPLLIAADVYRPAAIDQLQTIGKQLNVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FE G + DP + ++ + A N +D VL+DTAGR+Q +E LM L + L +P+ +L
Sbjct: 161 FEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMNELKNIKALAHPNDILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G AVD FN++L I G++LTK D D + GAALS+ V+G
Sbjct: 221 VVDAMTGQAAVDVAKGFNEQLD----------ITGVVLTKLDG-DTRGGAALSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ F+G G+ L
Sbjct: 270 PIKFIGQGEKMDAL 283
>gi|329929595|ref|ZP_08283302.1| signal recognition particle protein [Paenibacillus sp. HGF5]
gi|328936240|gb|EGG32692.1| signal recognition particle protein [Paenibacillus sp. HGF5]
Length = 460
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 377 AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARR 436
AK + P V++ G+ G GK+T K+A L + ++ A D +R A++QL +
Sbjct: 95 AKSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIKQLEVLGNQ 154
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F G + P +AK+ +Q A NG D V++DTAGR+ +E LM L ++ + NP
Sbjct: 155 INVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSVVNP 214
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D VL V +A+ G DAV+ FNQ+L + G++LTK D D + GAALS+
Sbjct: 215 DEVLLVVDAMTGQDAVNVAESFNQQLT----------LTGVVLTKLDG-DTRGGAALSVK 263
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P+ F G+ L+ + + + +L
Sbjct: 264 AVTGCPIKFAALGEKIDALEPFHPERMASRIL 295
>gi|374997111|ref|YP_004972610.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
gi|357215477|gb|AET70095.1| signal recognition particle protein [Desulfosporosinus orientis DSM
765]
Length = 453
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 12/190 (6%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P V++ +G+ G GK+T+ AK+A L + ++ ACD +R A++QL+ +++VP
Sbjct: 98 KPPTVILLLGLQGAGKTTHAAKLANMLKKQGKHPLLVACDIYRPAAIKQLQVLGEQIKVP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F G+E DP +A+ +I A +NG DVV++DTAGR+ NE LM L ++ P +L
Sbjct: 158 VFSMGHE-DPTKIAQASIVHANQNGQDVVIIDTAGRLHINEELMTELREIKSAVKPHEIL 216
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
V +A+ G DAV+ F+ +L +DG++LTK D D + G ALS+ V+G
Sbjct: 217 LVVDAMTGQDAVNVAQSFHSELG----------LDGVILTKLDG-DTRGGGALSIKAVTG 265
Query: 561 APVMFVGCGQ 570
+ FVG G+
Sbjct: 266 CTIKFVGIGE 275
>gi|357014337|ref|ZP_09079336.1| Ffh [Paenibacillus elgii B69]
Length = 455
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 158/300 (52%), Gaps = 36/300 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
+ S+F + GK L + D+ AL+ ++ L+ +V A+ + ++
Sbjct: 7 SSRLQSVFSKLRGKGKLTEDDVNEALREVRLALLEADVNFKVVKEFIAKVKEQAIGQEVL 66
Query: 360 RILTPRRSI-DIL-RDVHA---------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
+ TP + DI+ +++ A A+ + P V++ VG+ G GK+T K+A LL
Sbjct: 67 QSFTPAMVVVDIVNKELTALMGGTQSKLARANKPPTVIMMVGLQGAGKTTTTGKLAKLLL 126
Query: 409 QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDV 468
Q ++AA D +R A++QL+ +L+VP+F G + P +AK+A+Q A + +D
Sbjct: 127 QQNHRPLLAAGDIYRPAAIKQLQVLGEQLKVPVFSLGDKVSPVEIAKQALQHAKDHNNDY 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
++VDTAGR+ +E LM L +++ +PD +L V +A+ G DAV+ F+++L
Sbjct: 187 LIVDTAGRLHIDESLMEELKQIVEAVSPDEILLVVDAMTGQDAVNVAESFHKQLE----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAA+S+ V+G P+ F G+ L+ + + + +L
Sbjct: 242 -----LTGVVLTKLDG-DTRGGAAISVKAVTGCPIKFAAMGEKLDALEPFHPERMASRIL 295
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+ + GK L + D++ A++ +K L+ +V A+ + ++ L
Sbjct: 10 LQEIFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL 69
Query: 363 TP-RRSIDILRD----VHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D + + + R P V++ VG+ G GK+T K+A L +
Sbjct: 70 TPGQQVIKIVNDELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ ++ ACD R A++QL+ + VP+F G + +P +AK +I A + SDV+++
Sbjct: 130 KNPLLVACDVVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYAKSHNSDVIII 189
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + PD +L V +A+ G DAV+ S FN +L
Sbjct: 190 DTAGRLHVDEELMEELVNIKKAVQPDEILLVVDAMTGQDAVNVASSFNARLD-------- 241
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+ P+ ++G G+ TDL+
Sbjct: 242 --ITGVILTKLDG-DTRGGAALSIKAVTQKPIKYIGTGEKLTDLE 283
>gi|350563478|ref|ZP_08932299.1| signal recognition particle-docking protein FtsY
[Thioalkalimicrobium aerophilum AL3]
gi|349778613|gb|EGZ32964.1| signal recognition particle-docking protein FtsY
[Thioalkalimicrobium aerophilum AL3]
Length = 361
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 23/242 (9%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A+ E L IL+P + +HA KP+VV+ VG+NG GK+T + K+A +L +
Sbjct: 130 ALAEQLEAILSPVEQALV---IHA---DAKPHVVLMVGINGAGKTTTIGKLAKYLQNQQH 183
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
VM+AA DTFR+ AVEQL+T R Q+P+ + D A V +AI A DV+L D
Sbjct: 184 KVMLAAGDTFRAAAVEQLQTWGERNQIPVMAQKTGADSAAVIYDAIHSAKAKKMDVLLAD 243
Query: 473 TAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
TAGR+ LM L K+ + + P VL V +A +G +A++Q +F+Q +
Sbjct: 244 TAGRLHTQNNLMDELKKVKRVIQKCDADAPHDVLLVLDASIGQNALNQAKEFHQAVG--- 300
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+ G+++TK D K G ++ G PV F+G G++ DL+ N K+ V
Sbjct: 301 -------VTGLVITKLDGT-AKGGVIFNLAQTMGIPVKFIGVGETLADLQVFNAKAFVDA 352
Query: 587 LL 588
L
Sbjct: 353 FL 354
>gi|149198633|ref|ZP_01875677.1| signal recognition particle [Lentisphaera araneosa HTCC2155]
gi|149138348|gb|EDM26757.1| signal recognition particle [Lentisphaera araneosa HTCC2155]
Length = 469
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 155/298 (52%), Gaps = 39/298 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S+ F++I GK+ L + +++ A++ ++ L++ +V + E +++ +
Sbjct: 9 LSNTFKTITGKSVLSENNIKEAMEQVRLALLSADVHYDTVNEFVGEVSRQCLGEKVLKSV 68
Query: 363 TPRRSIDILRDVHA------------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
P S +++ VH P V++ VG++G GK+T AK+A++
Sbjct: 69 KP--SEQVVKVVHEELTRLMGTEEAEVNTSGNPAVIMMVGLHGAGKTTTCAKLAHFYKNQ 126
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
K V++AACD +R A++QL + +QVP+F D +A+ A+ A G D+V+
Sbjct: 127 KKKVLLAACDVYRPAAIDQLEALGKDIQVPVFSDRSTPDVVQIAQNAMNTAKSEGHDLVI 186
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+D AGR+Q +E +++ L ++ NP +L ++ +G +AV + F+Q L
Sbjct: 187 LDMAGRLQIDEDMVQELIRVKERFNPGEILLTADSALGQEAVSVATHFDQALN------- 239
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
I GI+LTK D D + GAALSM V+G P+ F+ G+ +DL+K + + +L
Sbjct: 240 ---ISGIVLTKLDG-DARGGAALSMRKVTGKPIKFITSGEKVSDLEKFRPEGMASRIL 293
>gi|94970062|ref|YP_592110.1| signal recognition particle subunit FFH/SRP54 (srp54) [Candidatus
Koribacter versatilis Ellin345]
gi|94552112|gb|ABF42036.1| signal recognition particle subunit FFH/SRP54 (srp54) [Candidatus
Koribacter versatilis Ellin345]
Length = 454
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 156/297 (52%), Gaps = 40/297 (13%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTP-R 365
F+S+ G+ L ++E AL+ ++ L+ +V A+ E ++ L+P
Sbjct: 13 FKSLRGQGKLTPENMEEALREIRLALLEADVNFKVVKEVVDRIQYKALGEDVMTALSPAE 72
Query: 366 RSIDILRDVHAA---KEQRK-------PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ + I+RD A K+ K P +++ G+ G GK+T K+A+WL M
Sbjct: 73 QVVKIVRDELIAILGKDTAKVKFASQPPTIILMAGLQGSGKTTTSGKLAHWLKNGGHRPM 132
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK---DPAI-VAKEAIQEATRNGSDVVLV 471
+ + D +R A EQL+ A+ + ++E E+ D + +AKEA +EA NG ++++V
Sbjct: 133 LVSVDVYRPAAREQLKVVAQAINAKLYEGKVEEANTDTVVRLAKEARREAISNGCNILIV 192
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ ++ LM + L L NP +LFV +A+ G DAV+ +F+ KL
Sbjct: 193 DTAGRLHIDDQLMDEMQHLKTLLNPQEILFVADAMTGQDAVNSAKEFHDKLT-------- 244
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALS+ V+G P+ F+G G+ Y L+ + IV +L
Sbjct: 245 --LTGVVLTKMDG-DARGGAALSIRQVTGQPIKFIGVGEKYDALEPFHPDRIVGRIL 298
>gi|291279724|ref|YP_003496559.1| signal recognition particle receptor FtsY [Deferribacter
desulfuricans SSM1]
gi|290754426|dbj|BAI80803.1| signal recognition particle receptor FtsY [Deferribacter
desulfuricans SSM1]
Length = 388
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 118/214 (55%), Gaps = 17/214 (7%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KPYV++ VGVNGVGK+T +AK+A + + M+AA DTFR+ A++QL+ A R+ VPI
Sbjct: 183 KPYVILVVGVNGVGKTTTIAKIAKMFKDNGLKTMLAAGDTFRAAAIDQLQVWADRVDVPI 242
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NN 495
++ DPA V +A+ A G DV++ DTAGR+ LM L K++ + N
Sbjct: 243 VKQQEGSDPAAVIYDAVVSAKAKGYDVLIADTAGRLHTKYNLMNELKKIVRVVKKEMPNA 302
Query: 496 PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSM 555
P +L V +A G +A++Q FN+ + + GI+LTK D K G + +
Sbjct: 303 PHEILLVLDATSGQNAINQAKIFNEAVG----------VTGIVLTKLDGT-AKGGVIVGI 351
Query: 556 VYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
V PV F+G G+ DLK + K+ V L +
Sbjct: 352 VDELKIPVKFIGFGEGMDDLKPFDAKTFVDALFE 385
>gi|261368256|ref|ZP_05981139.1| signal recognition particle-docking protein FtsY [Subdoligranulum
variabile DSM 15176]
gi|282569771|gb|EFB75306.1| signal recognition particle-docking protein FtsY [Subdoligranulum
variabile DSM 15176]
Length = 321
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 162/323 (50%), Gaps = 49/323 (15%)
Query: 295 SESEEDEEVGKHNKPDAKKTGWFSSMFQSIAG-----------KANLDKADLEPALKA-- 341
SE E +E+ + +TG+F ++ ++ + L AD+ PA
Sbjct: 10 SEKEFEEQQKMQRGLEKTRTGFFQNILNTLTNCQIDDDLYNDLEEQLILADVGPACAVRL 69
Query: 342 ---LKDRLMTKNVAAMEEAL-------VRILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 391
L+D + ++ EEAL + LTPR +++ D H P V++ +GV
Sbjct: 70 VDELRDEVEKNHLKTGEEALDALRGIICQELTPRYPLEL--DGH-------PAVILVIGV 120
Query: 392 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPA 451
NGVGK+T +AK+A+ + VM+AA DTFR+ A EQL A R VP+ + G DPA
Sbjct: 121 NGVGKTTTIAKLAHLYKEEGRRVMLAAGDTFRAAASEQLELWADRAGVPLVQAGQGADPA 180
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL---IYLNNPDL---VLFVGEA 505
V +A++ AT G D+V+ DTAGR+ + + LM L K+ + +P+ VL V +A
Sbjct: 181 AVIFDAVKSATAKGYDMVIADTAGRLHNKKGLMDELGKISRSVKKASPEASLEVLLVLDA 240
Query: 506 LVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMF 565
+ G +A+ Q +F + G++LTK D K G A+S+ G P+ F
Sbjct: 241 ITGQNAISQAEEFCRAAG----------ATGVVLTKLDGT-PKGGCAVSVWENLGLPIRF 289
Query: 566 VGCGQSYTDLKKLNVKSIVKTLL 588
VG G+ DL + ++ V++LL
Sbjct: 290 VGVGEKIDDLMPFDAQTFVESLL 312
>gi|268590802|ref|ZP_06125023.1| cell division protein [Providencia rettgeri DSM 1131]
gi|291313582|gb|EFE54035.1| cell division protein [Providencia rettgeri DSM 1131]
Length = 627
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E +KPYV++ VGVNGVGK+T + K+A SVM+AA DTFR+ AVEQL+ R +
Sbjct: 419 EDKKPYVILMVGVNGVGKTTTIGKLARQYQSEGKSVMLAAGDTFRAAAVEQLQVWGERNK 478
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL----- 493
+P+ + DPA V +AIQ A G DV++ DTAGR+Q+ LM L K++ +
Sbjct: 479 IPVVAQHTGADPASVIFDAIQSAQAKGVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLD 538
Query: 494 -NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
N P ++ +A G +AV Q F+ + + GI LTK D K G
Sbjct: 539 ENAPHEIMLTLDASTGQNAVSQAKLFDDAVG----------LTGITLTKLDGT-AKGGVI 587
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ G P+ ++G G+ DL+ ++ L
Sbjct: 588 FSIADQFGIPIRYIGIGEGIEDLRPFKADDFIEALF 623
>gi|323702674|ref|ZP_08114335.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333923302|ref|YP_004496882.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532337|gb|EGB22215.1| signal recognition particle protein [Desulfotomaculum nigrificans
DSM 574]
gi|333748863|gb|AEF93970.1| signal recognition particle protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 444
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 37/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+S+ GK L + D+ A++ ++ L+ +V A+ + ++ L
Sbjct: 9 LEEIFKSLKGKGRLTEDDVNQAMREVRMALLEADVNFKVVKEFVAHVKERAIGQDVLESL 68
Query: 363 TP-RRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+P ++ I I++D + P +++ VG+ G GK+T K+A L +
Sbjct: 69 SPAQQVIKIVKDELTELLGGTQAKINLSPKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R A++QL+ +L +P+F G E DP +AK A+++A G DVV++
Sbjct: 129 RRPLLVAGDIYRPAAIKQLQVLGEQLNIPVFSLGQE-DPVKIAKAAVEQANSTGRDVVII 187
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ NE LM L+ + P +L V +A+ G +AV+ FNQKL
Sbjct: 188 DTAGRLHINEELMDELANIKASVKPHEILLVVDAMTGQEAVNVADTFNQKLG-------- 239
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+DGI++TK D D + GAALS+ V+G P+ F G G+ L+ +
Sbjct: 240 --LDGIIMTKLDG-DARGGAALSVRKVTGCPIKFAGMGEKLDALEPFH 284
>gi|310828469|ref|YP_003960826.1| signal recognition particle protein [Eubacterium limosum KIST612]
gi|308740203|gb|ADO37863.1| signal recognition particle protein [Eubacterium limosum KIST612]
Length = 448
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 156/286 (54%), Gaps = 37/286 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLM------------TKNVA--AMEEALVRIL 362
F ++F ++ K L + D++ A + +K L+ TK V+ A+ E +++ L
Sbjct: 10 FQNIFSNLKRKGKLSEEDIKAASREIKLALLEADVNFKVVKQFTKAVSERAVGEEVLKSL 69
Query: 363 TP-RRSIDILRD----VHAAKEQRKPYV------VVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+ D + + Q+ +V + VG+ G GK+T AK+A L + K
Sbjct: 70 TPGQQFIKIVNDEMTKLLGGELQKMEFVEQGINIFMMVGLQGAGKTTTAAKIANLLRKEK 129
Query: 412 -VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R A++QL + L +P++ EKDP ++AK+A++ A G ++++
Sbjct: 130 KFKPLLVACDVYRPAAIDQLEILGKELDIPVYLNKDEKDPRVIAKKALEFAETEGYNLMI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q +E LM L L L P +L V + + G ++V+ +FN++L
Sbjct: 190 IDTAGRLQIDETLMNELVDLKELLEPTEILLVVDGMTGQESVNVADEFNRQLE------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ Y +G + ++G G+ TD++
Sbjct: 243 ---ITGVVLTKLDG-DTRGGAALSVTYTTGKTIKYIGTGEKLTDIE 284
>gi|450002251|ref|ZP_21825979.1| signal recognition particle protein [Streptococcus mutans N29]
gi|449183368|gb|EMB85352.1| signal recognition particle protein [Streptococcus mutans N29]
Length = 516
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T ++++VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|449882056|ref|ZP_21784753.1| signal recognition particle protein [Streptococcus mutans SA38]
gi|449924256|ref|ZP_21799534.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449163079|gb|EMB66194.1| signal recognition particle protein [Streptococcus mutans 4SM1]
gi|449250610|gb|EMC48663.1| signal recognition particle protein [Streptococcus mutans SA38]
Length = 516
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T ++++VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|223993863|ref|XP_002286615.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
gi|220977930|gb|EED96256.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 451
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
KP +++FVG+ G GK+T++AK A++ + M DTFR+GA +QL+ +A +L++P
Sbjct: 113 KPNIILFVGLQGAGKTTSIAKYAHYYQRKGWKTAMVCADTFRAGAFDQLKQNATKLRIPF 172
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
+ E DP ++A+E ++ +G ++++VDT+GR + E L + ++ PD +F
Sbjct: 173 YGSYTEADPVLIAEEGVERFISDGYEIIIVDTSGRHRQEETLFEEMQEISAAVRPDNTIF 232
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A G DQ F+ + + +++TK D K G ALS V +G+
Sbjct: 233 VMDATQGQAVYDQALAFHGAVN----------VGSVIVTKLDG-HAKGGGALSAVSATGS 281
Query: 562 PVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P++F+G G+ + DL N KS V LL
Sbjct: 282 PIVFLGSGERFEDLDPFNAKSFVSKLL 308
>gi|449968858|ref|ZP_21812871.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|450028539|ref|ZP_21832245.1| signal recognition particle protein [Streptococcus mutans G123]
gi|450056695|ref|ZP_21842180.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|450066939|ref|ZP_21846271.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|450092298|ref|ZP_21855923.1| signal recognition particle protein [Streptococcus mutans W6]
gi|450147551|ref|ZP_21875136.1| signal recognition particle protein [Streptococcus mutans 14D]
gi|449174709|gb|EMB77184.1| signal recognition particle protein [Streptococcus mutans 2VS1]
gi|449195624|gb|EMB96938.1| signal recognition particle protein [Streptococcus mutans G123]
gi|449206440|gb|EMC07143.1| signal recognition particle protein [Streptococcus mutans NLML4]
gi|449208373|gb|EMC08968.1| signal recognition particle protein [Streptococcus mutans NLML9]
gi|449218645|gb|EMC18650.1| signal recognition particle protein [Streptococcus mutans W6]
gi|449236954|gb|EMC35853.1| signal recognition particle protein [Streptococcus mutans 14D]
Length = 516
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGIEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|390630509|ref|ZP_10258490.1| Signal recognition particle protein Ffh [Weissella confusa LBAE
C39-2]
gi|390484245|emb|CCF30838.1| Signal recognition particle protein Ffh [Weissella confusa LBAE
C39-2]
Length = 487
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L K +M A D +R A++QL+T ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALKLKNEKNARPLMIAADVYRPAAIDQLKTLGEQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FE G + DP + ++ + +A SD V +D AGR+Q +E LM+ L+ + + NPD +L
Sbjct: 161 FEMGTDADPRDIVRQGLAKAAELKSDYVFIDAAGRLQIDEALMQELADVKEIANPDEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G +AV+ FN++L + G++LTK D D + GAALS+ V+G
Sbjct: 221 VVDAMTGQNAVETAEGFNERLD----------VTGVVLTKLDG-DTRGGAALSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGQGEKMADL 283
>gi|355677891|ref|ZP_09060658.1| signal recognition particle protein [Clostridium citroniae
WAL-17108]
gi|354812977|gb|EHE97591.1| signal recognition particle protein [Clostridium citroniae
WAL-17108]
Length = 458
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 157/288 (54%), Gaps = 37/288 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALVRIL 362
++F+++ GK L +AD++ ALK +K L+ +V+ A+ E + L
Sbjct: 10 LQNVFKNLRGKGRLTEADVKAALKEVKMALLEADVSFKVVKQFVSSVQDRAVGEDVFGSL 69
Query: 363 TPRRSI------DILRDVH------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
TP +++ ++++ + A K + +++ G+ G GK+T AK+A +
Sbjct: 70 TPGQTVIKIVTEELVKLMGSETTEIALKPGNEITIIMMAGLQGAGKTTTTAKIAGKMKAK 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++AACD +R A++QL+ + ++ VP+F G P +AK A++ A +NG ++V+
Sbjct: 130 GKKPLLAACDVYRPAAIKQLQINGEKVGVPVFTMGDRNKPVDIAKAAVEHAAKNGMNLVI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +E +M L ++ + + V +A+ G DAV+ FN+K+
Sbjct: 190 LDTAGRLHIDEGMMEELVEIKDHVDVYQTILVVDAMTGQDAVNVSGTFNEKIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
IDG++LTK D D + GAALS+ V+G P+++VG G+ +DL++
Sbjct: 243 ---IDGVILTKLDG-DTRGGAALSIRAVTGKPILYVGMGEKLSDLEQF 286
>gi|392331490|ref|ZP_10276105.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
gi|391419169|gb|EIQ81981.1| signal recognition particle subunit FFH/SRP54 [Streptococcus canis
FSL Z3-227]
Length = 522
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+ I GK L ++D++ K ++ L+ +VA A+ ++
Sbjct: 7 TQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHDII 66
Query: 360 RILTPRRSI-----DILRDVHAA------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + L + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPTQQILKIVNEELTGILGAETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLI 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+FE G + + + +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQISVPVFEMGTDHSAVEIVRRGLEQARENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FN++L+
Sbjct: 187 YVLIDTAGRLQIDEKLMEELRDVKGLVNPNDILLVVDSMIGQEAANVAEEFNRQLS---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------ITGLVLTKIDG-DTRGGAALSVREITGKPIKFTGTGEKITDIETFH 287
>gi|218887972|ref|YP_002437293.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758926|gb|ACL09825.1| signal recognition particle protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 518
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 153/297 (51%), Gaps = 36/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+ +F+ G LD+A+++ L+ ++ L+ +V + + +++ L
Sbjct: 9 LTGVFRKFTGTGRLDEANIQDGLREVRLALLEADVNFKVVRDFIERVRERCLGQDVLKSL 68
Query: 363 TP-RRSIDILRD-----VHAAKEQ-----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ + I+ D + Q ++PYV++ VG+ G GK+T+ AK+A L + K
Sbjct: 69 TPAQQVVKIVHDELVELLGGGTTQLDLRGKQPYVIMMVGLQGSGKTTSSAKIANLLRKQK 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ + D +R A++QL T A++L +P + +P +A A+++A +VV+V
Sbjct: 129 MRPYLVPADVYRPAAIDQLHTLAKQLDIPAYPSAPGMNPVDIAVAAVEDAREKQCNVVIV 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM+ L + P +LFV +A+ G DAV FN L
Sbjct: 189 DTAGRLHIDETLMQELVSIKGRVEPQEILFVADAMTGQDAVTVAESFNTALD-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
I G++LTK D D + GAALS+ V+G PV FVG G+ +D++ + + +L
Sbjct: 241 --ISGVVLTKMDG-DARGGAALSIRSVTGKPVKFVGMGEKLSDIEVFHPDRVAGRIL 294
>gi|229552446|ref|ZP_04441171.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|258539816|ref|YP_003174315.1| signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|385835468|ref|YP_005873242.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|418070818|ref|ZP_12708093.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|421768780|ref|ZP_16205490.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|421771068|ref|ZP_16207729.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
gi|423078848|ref|ZP_17067525.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|229314183|gb|EEN80156.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus rhamnosus
LMS2-1]
gi|257151492|emb|CAR90464.1| Signal recognition particle protein [Lactobacillus rhamnosus Lc
705]
gi|355394959|gb|AER64389.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
8530]
gi|357540238|gb|EHJ24255.1| signal recognition particle protein [Lactobacillus rhamnosus R0011]
gi|357549136|gb|EHJ30984.1| signal recognition particle protein [Lactobacillus rhamnosus ATCC
21052]
gi|411185629|gb|EKS52756.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP2]
gi|411186503|gb|EKS53627.1| Signal recognition particle, subunit Ffh SRP54 [Lactobacillus
rhamnosus LRHMDP3]
Length = 478
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 115/189 (60%), Gaps = 12/189 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ G+ G GK+T + K++ +L+++ K ++ A D +R A++QL+T ++L VP+
Sbjct: 101 PTVIMMAGLQGAGKTTTVGKLSKYLMENEKARPLLIAADVYRPAAIDQLQTIGKQLNVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FE G + DP + ++ + A N +D VL+DTAGR+Q +E LM L + L +P+ +L
Sbjct: 161 FEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMTELKNIKELAHPNDILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G AVD FN++L I G++LTK D D + GAALS+ V+G
Sbjct: 221 VVDAMTGQAAVDVAKGFNEQLD----------ITGVVLTKLDG-DTRGGAALSIRAVTGK 269
Query: 562 PVMFVGCGQ 570
P+ F+G G+
Sbjct: 270 PIKFIGQGE 278
>gi|449931990|ref|ZP_21802581.1| signal recognition particle protein [Streptococcus mutans 3SN1]
gi|449161857|gb|EMB65027.1| signal recognition particle protein [Streptococcus mutans 3SN1]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T ++++VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|449918559|ref|ZP_21797416.1| signal recognition particle protein [Streptococcus mutans 1SM1]
gi|449160184|gb|EMB63462.1| signal recognition particle protein [Streptococcus mutans 1SM1]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|24379497|ref|NP_721452.1| signal recognition particle protein [Streptococcus mutans UA159]
gi|449864523|ref|ZP_21778423.1| signal recognition particle protein [Streptococcus mutans U2B]
gi|449870470|ref|ZP_21780642.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449984811|ref|ZP_21819282.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|450081930|ref|ZP_21852033.1| signal recognition particle protein [Streptococcus mutans N66]
gi|26007034|sp|Q54431.3|SRP54_STRMU RecName: Full=Signal recognition particle protein; AltName:
Full=Fifty-four homolog
gi|24377436|gb|AAN58758.1|AE014944_8 signal recognition particle protein subunit, Ffh [Streptococcus
mutans UA159]
gi|449156378|gb|EMB59847.1| signal recognition particle protein [Streptococcus mutans 8ID3]
gi|449179745|gb|EMB81936.1| signal recognition particle protein [Streptococcus mutans NFSM2]
gi|449214694|gb|EMC14933.1| signal recognition particle protein [Streptococcus mutans N66]
gi|449264947|gb|EMC62280.1| signal recognition particle protein [Streptococcus mutans U2B]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|334880634|emb|CCB81397.1| signal recognition particle protein Ffh [Lactobacillus pentosus
MP-10]
Length = 484
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T + K+A L + +M A D +R A+EQL+ ++
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTTVGKLALKLKNEQNARPLMIAADVYRPAAIEQLQQVGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
+ VP+F+ G + DP + ++ + +A N +D V +DTAGR+Q +E LM L+ + L +P
Sbjct: 156 IDVPVFQLGTDVDPVEIVRQGMAQAQENHNDYVFIDTAGRLQIDEQLMNELANIKDLVHP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L V +A+ G +AV+ FN KL + G++LTK D D + GAALS+
Sbjct: 216 DEILLVIDAMTGQNAVNTAEGFNDKLD----------VTGVVLTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P+ FVG G+ TDL
Sbjct: 265 AVTGKPIKFVGQGEKMTDL 283
>gi|199597126|ref|ZP_03210558.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|258508639|ref|YP_003171390.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|385828300|ref|YP_005866072.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|199591930|gb|EDZ00005.1| Signal recognition particle GTPase [Lactobacillus rhamnosus HN001]
gi|257148566|emb|CAR87539.1| Signal recognition particle protein [Lactobacillus rhamnosus GG]
gi|259649945|dbj|BAI42107.1| signal recognition particle protein [Lactobacillus rhamnosus GG]
Length = 478
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 115/189 (60%), Gaps = 12/189 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ G+ G GK+T + K++ +L+++ K ++ A D +R A++QL+T ++L VP+
Sbjct: 101 PTVIMMAGLQGAGKTTTVGKLSKYLMENEKARPLLIAADVYRPAAIDQLQTIGKQLNVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FE G + DP + ++ + A N +D VL+DTAGR+Q +E LM L + L +P+ +L
Sbjct: 161 FEMGTDTDPVEIVRQGLATAKENKNDYVLIDTAGRLQIDEKLMTELKNIKELAHPNDILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G AVD FN++L I G++LTK D D + GAALS+ V+G
Sbjct: 221 VVDAMTGQAAVDVAKGFNEQLD----------ITGVVLTKLDG-DTRGGAALSIRAVTGK 269
Query: 562 PVMFVGCGQ 570
P+ F+G G+
Sbjct: 270 PIKFIGQGE 278
>gi|450132637|ref|ZP_21870177.1| signal recognition particle protein [Streptococcus mutans NLML8]
gi|449152802|gb|EMB56500.1| signal recognition particle protein [Streptococcus mutans NLML8]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|329955639|ref|ZP_08296547.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
gi|328526042|gb|EGF53066.1| signal recognition particle protein [Bacteroides clarus YIT 12056]
Length = 440
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP V++ G+ G GK+T K+A L K ++ ACD +R A+EQLR A +++VP
Sbjct: 98 KPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++ + KDP +A+ AIQEA G D+V+VDTAGR+ +E +M ++ + NP+ +L
Sbjct: 158 MYSEPDSKDPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKAAINPNEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +++ G DAV+ +FN++L +G++LTK D D + GAALS+ V
Sbjct: 218 FVVDSMTGQDAVNTAKEFNERLD----------FNGVVLTKLDG-DTRGGAALSIRSVVN 266
Query: 561 APVMFVGCGQ 570
P+ FVG G+
Sbjct: 267 KPIKFVGTGE 276
>gi|319649591|ref|ZP_08003747.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
gi|317398753|gb|EFV79435.1| signal recognition particle [Bacillus sp. 2_A_57_CT2]
Length = 450
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 155/298 (52%), Gaps = 37/298 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+ Q I GK +++AD++ ++ ++ L+ +V A+ + +++ L
Sbjct: 10 LQNTIQKIRGKGKINEADVKEMMREVRLALLEADVNFKVVKEFVKKVSERAVGQEVLKSL 69
Query: 363 TP-RRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-H 410
TP ++ I ++++ A R P V++ VG+ G GK+T K+A L + +
Sbjct: 70 TPGQQVIKVVKEELTELMGGEQSKIAVSNRPPTVIMMVGLQGAGKTTTTGKLANLLRKKY 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ M+ A D +R A++QL T ++L +P+F G + P +AK+AI +A + D VL
Sbjct: 130 NRNPMLVAADIYRPAAIKQLETLGKQLNMPVFSLGDQVSPVEIAKQAIAKAKEDHHDYVL 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +E LM L ++ L+NPD + V +A+ G DAV+ FN L
Sbjct: 190 IDTAGRLHVDEALMDELKQIKELSNPDEIFLVVDAMTGQDAVNVAQSFNDLLG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALS+ V+ P+ FVG G+ L+ + + + +L
Sbjct: 243 ---LTGVVLTKLDG-DTRGGAALSIRSVTNTPIKFVGLGEKLDALEAFHPERMASRIL 296
>gi|449902748|ref|ZP_21791679.1| signal recognition particle protein [Streptococcus mutans M230]
gi|449975087|ref|ZP_21815612.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|450100286|ref|ZP_21858716.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|450122380|ref|ZP_21866721.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|450169747|ref|ZP_21883158.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449177352|gb|EMB79655.1| signal recognition particle protein [Streptococcus mutans 11VS1]
gi|449220516|gb|EMC20380.1| signal recognition particle protein [Streptococcus mutans SF1]
gi|449227957|gb|EMC27347.1| signal recognition particle protein [Streptococcus mutans ST6]
gi|449246900|gb|EMC45195.1| signal recognition particle protein [Streptococcus mutans SM4]
gi|449262039|gb|EMC59496.1| signal recognition particle protein [Streptococcus mutans M230]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|358067367|ref|ZP_09153848.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
gi|356694539|gb|EHI56199.1| signal recognition particle protein [Johnsonella ignava ATCC 51276]
Length = 457
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 155/286 (54%), Gaps = 37/286 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLM---------TKNVAAMEEALV-----RIL 362
++F+S+ GK L +AD++ ALK ++ L+ K VA ++E V L
Sbjct: 10 LQNIFKSLRGKGKLSEADVKAALKEVRMALLEADVNFKVVKKFVADIQERAVGTEVLESL 69
Query: 363 TPRRSI------DILRDVHA------AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
TP + + ++++ + + + Q + V++ G+ G GK+T AK+A L
Sbjct: 70 TPAQHVIKIVNEELIKLIGSETKEIIMQPQGEITVIMMAGLQGAGKTTTAAKLAGKLKSK 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ ++ ACD +R AVEQL+ + + +P+F G P +AK A++ A +N +++++
Sbjct: 130 GNTPLLVACDVYRPAAVEQLKINGEKQNIPVFSMGNNLSPVDIAKAALEHAKKNHNNILI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +E +M L+ + N + L V +A+ G DAV+ FN K+
Sbjct: 190 LDTAGRLHIDEKMMDELADIKKNINVNQTLLVVDAMTGQDAVNVAESFNDKIE------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+DGI++TK D D + GAALS+ V+G P+++VG G+ +DL+
Sbjct: 243 ---LDGIIVTKLDG-DTRGGAALSIKAVTGKPILYVGMGEKLSDLE 284
>gi|291320541|ref|YP_003515805.1| signal recognition particle protein [Mycoplasma agalactiae]
gi|290752876|emb|CBH40851.1| Signal Recognition Particle Protein [Mycoplasma agalactiae]
Length = 452
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 132/225 (58%), Gaps = 17/225 (7%)
Query: 355 EEALVRILTPRRSIDIL-RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
E+ +++I+ +DIL ++V + +KPY+++ G+ G GK+T AK+AY+L + K
Sbjct: 71 EQTMIKIVH-NELVDILGKEVRPIEITKKPYIIMMTGLQGSGKTTACAKIAYFL-KKKNQ 128
Query: 414 V---MMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ ++ A D +R AV+QL T A+ +QV FEKG + K+A+ A N +D+++
Sbjct: 129 IEKPLLVAADIYRPAAVQQLVTLAKGIQVDYFEKGTNFSAQEIVKDALVFAKENKNDLII 188
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +EPLM L +L ++ P + FV +AL G D ++ S FN +L
Sbjct: 189 IDTAGRLSIDEPLMNELWELKNISEPQEIFFVADALSGQDIINVASAFNDRLK------- 241
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+ G ++TK D+ D + GAALS+ V P+ F+G G+ ++L
Sbjct: 242 ---LTGSVITKLDS-DARGGAALSLSKVLSLPIRFIGTGEKISNL 282
>gi|389806376|ref|ZP_10203507.1| signal recognition particle protein [Rhodanobacter thiooxydans
LCS2]
gi|388445596|gb|EIM01660.1| signal recognition particle protein [Rhodanobacter thiooxydans
LCS2]
Length = 459
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 12/210 (5%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS-VMMAACDTFRSGAVEQLRTHARRLQ 438
Q+ P VV+ G+ G GK+T +AK+A L + K VM+ +CD +R A+EQLRT A ++
Sbjct: 97 QQPPAVVLMAGLQGAGKTTTVAKLARLLTERKKKKVMVVSCDVYRPAAIEQLRTLAEQVG 156
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
V F +DP +AK+AI A R DV++VDTAGR+ +E +M + L P
Sbjct: 157 VKFFPSAAGQDPVQIAKDAIAAARREVVDVLIVDTAGRLHVDEAMMAEIKALHAAITPIE 216
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV +++ G DA + FN+ L + G++LTK D D + GAALS+ YV
Sbjct: 217 TLFVVDSMTGQDAANTAKAFNEALP----------LTGVILTKTDG-DARGGAALSVRYV 265
Query: 559 SGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+G P+ F+G G+ L+ + + + +L
Sbjct: 266 TGKPIKFLGAGEKSDALEPFHPDRLAQRIL 295
>gi|449899617|ref|ZP_21791113.1| signal recognition particle protein [Streptococcus mutans R221]
gi|449258112|gb|EMC55708.1| signal recognition particle protein [Streptococcus mutans R221]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|450159193|ref|ZP_21879300.1| signal recognition particle protein [Streptococcus mutans 66-2A]
gi|449241479|gb|EMC40105.1| signal recognition particle protein [Streptococcus mutans 66-2A]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 37/288 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRILTPRRSIDIL 371
T F+++ GK + ++DL ++ ++ L+ +V + + + + + D+L
Sbjct: 7 TDRLQKAFKNLRGKGKISESDLRETMREIRLALLEADVNFKVVRQFVKTVQEKAKGADVL 66
Query: 372 RDVHAA-----------------------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWL- 407
++ A K + P V++ VG+ G GK+T+ K+A L
Sbjct: 67 EGLNPAQQIVKIVNDELTNMMGKSATPLVKSDKIPTVIMMVGLQGAGKTTSAGKLAKKLK 126
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+M A D +R A+EQL ++ VP+F++G + DP + ++ ++EA +N +D
Sbjct: 127 TDDHARPLMIAADVYRPAAIEQLEKVGEQVGVPVFQEGTDVDPVQIVQDGLKEADKNNND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + + NP+ +L V +A+ G +AVD FN L
Sbjct: 187 YVLIDTAGRLQIDENLMDELKNIKKVANPNDILLVVDAMTGQNAVDTAVGFNDALD---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
I G++LTK D D + GAALS+ V+ P+MFVG G+ DL
Sbjct: 243 ------ITGVILTKLDG-DTRGGAALSIRAVTDKPIMFVGQGEKLDDL 283
>gi|450088635|ref|ZP_21854871.1| signal recognition particle protein [Streptococcus mutans NV1996]
gi|449216367|gb|EMC16492.1| signal recognition particle protein [Streptococcus mutans NV1996]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|428776938|ref|YP_007168725.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
gi|428691217|gb|AFZ44511.1| signal recognition particle subunit FFH/SRP54 (srp54) [Halothece
sp. PCC 7418]
Length = 483
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 116/204 (56%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A L + S +M D +R A++QL+T
Sbjct: 90 NVPLAEAETAPTVILMAGLQGTGKTTATAKLALHLRKQNRSALMVGTDVYRPAAIDQLKT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++ VP+FE G E +P VAK+ I++A G D VLVDTAGR+Q ++ +M+ L +
Sbjct: 150 LGEQIDVPVFEMGTEANPVDVAKQGIEKAKAEGIDTVLVDTAGRLQIDQDMMQELIAIKN 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+P VL V +A+ G +A F+Q++ + G +LTK D D + GAA
Sbjct: 210 EISPHEVLLVVDAMTGQEAASLTDTFHQQVG----------VTGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ VSG P+ F+G G+ L+
Sbjct: 259 LSVRQVSGQPIKFIGVGEKVEALQ 282
>gi|450182820|ref|ZP_21888463.1| signal recognition particle protein [Streptococcus mutans 24]
gi|449244145|gb|EMC42531.1| signal recognition particle protein [Streptococcus mutans 24]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLHGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|229549880|ref|ZP_04438605.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255972664|ref|ZP_05423250.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256959109|ref|ZP_05563280.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|257079141|ref|ZP_05573502.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294781588|ref|ZP_06746924.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|307269511|ref|ZP_07550850.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|312951630|ref|ZP_07770525.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|384518726|ref|YP_005706031.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|397700009|ref|YP_006537797.1| signal recognition particle protein [Enterococcus faecalis D32]
gi|422708604|ref|ZP_16766132.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|422727183|ref|ZP_16783626.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|422734180|ref|ZP_16790474.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|422869223|ref|ZP_16915743.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|229304953|gb|EEN70949.1| signal recognition particle protein [Enterococcus faecalis ATCC
29200]
gi|255963682|gb|EET96158.1| signal recognition particle protein [Enterococcus faecalis T1]
gi|256949605|gb|EEU66237.1| signal recognition particle protein [Enterococcus faecalis DS5]
gi|256987171|gb|EEU74473.1| signal recognition particle protein [Enterococcus faecalis JH1]
gi|294451284|gb|EFG19750.1| signal recognition particle protein [Enterococcus faecalis PC1.1]
gi|306514131|gb|EFM82707.1| signal recognition particle protein [Enterococcus faecalis TX4248]
gi|310630347|gb|EFQ13630.1| signal recognition particle protein [Enterococcus faecalis TX0102]
gi|315037112|gb|EFT49044.1| signal recognition particle protein [Enterococcus faecalis TX0027]
gi|315158208|gb|EFU02225.1| signal recognition particle protein [Enterococcus faecalis TX0312]
gi|315168902|gb|EFU12919.1| signal recognition particle protein [Enterococcus faecalis TX1341]
gi|323480859|gb|ADX80298.1| signal recognition particle protein [Enterococcus faecalis 62]
gi|329571907|gb|EGG53585.1| signal recognition particle protein [Enterococcus faecalis TX1467]
gi|397336648|gb|AFO44320.1| signal recognition particle protein [Enterococcus faecalis D32]
Length = 472
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P V++ G+ G GK+T K+A L++ ++ A D +R A++QL+
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++L+VP+F+ G + +P + ++ + A +D VL+DTAGR+ +E LM L ++
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L NP+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAA
Sbjct: 212 LTNPNEILLVVDAMTGQDAVNVADSFNEQLG----------ITGVVITKMDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+GAP+ FVG G+ TDL+
Sbjct: 261 LSIRAVTGAPIKFVGSGEKLTDLE 284
>gi|450165643|ref|ZP_21881945.1| signal recognition particle protein [Streptococcus mutans B]
gi|449240476|gb|EMC39151.1| signal recognition particle protein [Streptococcus mutans B]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|450034650|ref|ZP_21834504.1| signal recognition particle protein [Streptococcus mutans M21]
gi|449196176|gb|EMB97461.1| signal recognition particle protein [Streptococcus mutans M21]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|157362996|ref|YP_001469763.1| signal recognition particle protein [Thermotoga lettingae TMO]
gi|157313600|gb|ABV32699.1| signal recognition particle protein [Thermotoga lettingae TMO]
Length = 433
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 152/278 (54%), Gaps = 36/278 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S +F+S+ G+ L + ++ A++ +K L+ +V A+ E +++
Sbjct: 9 LSKIFRSLTGQGRLTEKNINEAVRQVKLSLLEADVNFKVVKEFIDSVKAKALGEEVLKSF 68
Query: 363 TP-RRSIDILRD---------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
TP ++ + I+RD + P V++ VG+ G GK+T AK+A +L +
Sbjct: 69 TPDQQFVKIVRDELINIMGKSAATLNLRHHPSVIMLVGLQGSGKTTTAAKLANYLRKSGR 128
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+V++ A DT+R A++QL + +Q+P+ G K+P I+ ++A++ + + + ++ D
Sbjct: 129 TVLLVAADTYRPAAIDQLEKLGKSIQIPVL-TGDRKNPLIIVQQALEYSKNSQYNTLIFD 187
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ +E +M L ++ L+NPD +L V +A++G DAV+ +F+++L
Sbjct: 188 TAGRLHIDEEMMEELQQIKQLSNPDEILMVVDAMIGQDAVNSALEFDKRLN--------- 238
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
+ G ++TK D D + G LS+ +++G PV F+G G+
Sbjct: 239 -VTGFIVTKMDG-DARGGVILSITHITGKPVKFIGVGE 274
>gi|154483576|ref|ZP_02026024.1| hypothetical protein EUBVEN_01280 [Eubacterium ventriosum ATCC
27560]
gi|149735486|gb|EDM51372.1| signal recognition particle protein [Eubacterium ventriosum ATCC
27560]
Length = 452
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 160/292 (54%), Gaps = 43/292 (14%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
++F+++ GK L + D++ ALK +K L+ +V A+ + ++ L
Sbjct: 12 LQNIFKNLRGKGRLTEEDVKAALKEVKIALLEADVNFKVVKDFVKKVNERAVGQDVMNSL 71
Query: 363 TPRRSI-----DILRDVHAAKEQR-------KPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
TP + + + L ++ ++ + V++ +G+ G GK+T AK+A L
Sbjct: 72 TPGQMVIKIVNEELTNLMGSETTELKILPDNQITVIMMMGLQGAGKTTTTAKIAGKLKAK 131
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R A+EQL+ + + QVP+F G ++ P +AK AI+ A +N ++VV+
Sbjct: 132 GKRPLLVACDVYRPAAIEQLKINGEKQQVPVFSMGDKQKPLNIAKAAIEHAKKNNNNVVI 191
Query: 471 VDTAGRMQDNEPLMRALSKL---IYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
+DTAGR+ +E +M L ++ I L LV+ +A+ G DAV+ +FN+K+
Sbjct: 192 LDTAGRLHVDEDMMNELVEIRDNIELTQTVLVV---DAMTGQDAVNVAKEFNEKIG---- 244
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
IDGI++TK D D + GAALS+ ++G P++++G G+ +DL++ +
Sbjct: 245 ------IDGIIVTKLDG-DTRGGAALSIKAITGKPILYIGMGEKLSDLEQFH 289
>gi|449960337|ref|ZP_21810595.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|450137749|ref|ZP_21871799.1| signal recognition particle protein [Streptococcus mutans NLML1]
gi|449167693|gb|EMB70560.1| signal recognition particle protein [Streptococcus mutans 4VF1]
gi|449234787|gb|EMC33774.1| signal recognition particle protein [Streptococcus mutans NLML1]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|148377845|ref|YP_001256721.1| Signal recognition particle protein [Mycoplasma agalactiae PG2]
gi|148291891|emb|CAL59282.1| Signal Recognition Particle Protein [Mycoplasma agalactiae PG2]
Length = 452
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 131/225 (58%), Gaps = 17/225 (7%)
Query: 355 EEALVRILTPRRSIDIL-RDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
E+ +++I+ +DIL ++V + +KPY+++ G+ G GK+T AK+AY+L + K
Sbjct: 71 EQTMIKIVH-NELVDILGKEVRPIEITKKPYIIMMTGLQGSGKTTACAKIAYFL-KKKNQ 128
Query: 414 V---MMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
+ ++ A D +R AV+QL T A+ +QV FEKG + K+A+ A N +D+++
Sbjct: 129 IEKPLLVAADIYRPAAVQQLVTLAKGIQVDYFEKGTNFSAQEIVKDALVFAKENKNDLII 188
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+ +EPLM L +L ++ P V FV +AL G D ++ S FN +L
Sbjct: 189 IDTAGRLSIDEPLMNELWELKNISEPQEVFFVADALSGQDIINVASTFNDRLK------- 241
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+ G ++TK D+ D + GAALS V P+ F+G G+ ++L
Sbjct: 242 ---LTGSVITKLDS-DARGGAALSFSKVLSLPIRFIGTGEKISNL 282
>gi|450105269|ref|ZP_21859781.1| signal recognition particle protein [Streptococcus mutans SF14]
gi|449224870|gb|EMC24494.1| signal recognition particle protein [Streptococcus mutans SF14]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|449965794|ref|ZP_21812028.1| signal recognition particle protein [Streptococcus mutans 15VF2]
gi|449170924|gb|EMB73611.1| signal recognition particle protein [Streptococcus mutans 15VF2]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|260437024|ref|ZP_05790840.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
gi|292810333|gb|EFF69538.1| signal recognition particle protein [Butyrivibrio crossotus DSM
2876]
Length = 448
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 116/196 (59%), Gaps = 11/196 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ G GK+T AK+A L + ++ ACD +R A++QL+ + + VP+F
Sbjct: 102 PTVIMMAGLQGAGKTTTTAKIAGKLKEKGKRPLLVACDVYRPAAIKQLQINGEKQGVPVF 161
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E G P +AK A+ A +N ++VV++DTAGR+ +E +M L ++ N + V
Sbjct: 162 EMGDNNKPVDIAKAALAHAQKNNNNVVILDTAGRLHVDEDMMNELKEIKEAVNVHQTILV 221
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G DAV+ S FN+++ IDG++LTK D D + GAALS+ V+G P
Sbjct: 222 VDAMTGQDAVNVASTFNEQIG----------IDGVVLTKLDG-DTRGGAALSIKAVTGKP 270
Query: 563 VMFVGCGQSYTDLKKL 578
++++G G+ +DL++
Sbjct: 271 ILYIGMGEKLSDLEQF 286
>gi|94988647|ref|YP_596748.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94992471|ref|YP_600570.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|417856844|ref|ZP_12501903.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|94542155|gb|ABF32204.1| signal recognition particle subunit FFH/SRP54 [Streptococcus
pyogenes MGAS9429]
gi|94545979|gb|ABF36026.1| signal recognition particle, subunit FFH/SRP54 [Streptococcus
pyogenes MGAS2096]
gi|387933799|gb|EIK41912.1| signal recognition particle protein [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 522
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 152/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+ I GK L ++D++ K ++ L+ +VA A+ ++
Sbjct: 9 TQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEII 68
Query: 360 RILTPRRSI---------DILRDVHAA--KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I IL A K + P +++ VG+ G GK+T K+A L+
Sbjct: 69 DTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFAGKLANKLI 128
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G + + ++ +++A N +D
Sbjct: 129 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRND 188
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L PD +L V ++++G +A + +FN +L+
Sbjct: 189 YVLIDTAGRLQIDEKLMEELRDVKALAQPDEILLVVDSMIGQEAANVAYEFNHQLS---- 244
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 245 ------ITGVVLTKIDG-DTRGGAALSVREITGKPIKFTGIGEKITDIETFH 289
>gi|449937443|ref|ZP_21804559.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|450077600|ref|ZP_21850546.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|450154315|ref|ZP_21877665.1| signal recognition particle protein [Streptococcus mutans 21]
gi|449164238|gb|EMB67305.1| signal recognition particle protein [Streptococcus mutans 2ST1]
gi|449211007|gb|EMC11429.1| signal recognition particle protein [Streptococcus mutans N3209]
gi|449237922|gb|EMC36717.1| signal recognition particle protein [Streptococcus mutans 21]
Length = 512
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|167761983|ref|ZP_02434110.1| hypothetical protein BACSTE_00328 [Bacteroides stercoris ATCC
43183]
gi|167700215|gb|EDS16794.1| signal recognition particle protein [Bacteroides stercoris ATCC
43183]
Length = 440
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP V++ G+ G GK+T K+A L K ++ ACD +R A+EQLR A +++VP
Sbjct: 98 KPAVILMSGLQGSGKTTFSGKLARMLKTKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++ + KDP +A+ AIQEA G D+V+VDTAGR+ +E +M ++ + NP+ +L
Sbjct: 158 MYSEPDSKDPVSIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKSAINPNEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +++ G DAV+ +FN++L +G++LTK D D + GAALS+ V
Sbjct: 218 FVVDSMTGQDAVNTAKEFNERLD----------FNGVVLTKLDG-DTRGGAALSIRTVVN 266
Query: 561 APVMFVGCGQ 570
P+ FVG G+
Sbjct: 267 KPIKFVGTGE 276
>gi|450109576|ref|ZP_21861516.1| signal recognition particle protein [Streptococcus mutans SM6]
gi|449225932|gb|EMC25497.1| signal recognition particle protein [Streptococcus mutans SM6]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|449994935|ref|ZP_21822829.1| signal recognition particle protein [Streptococcus mutans A9]
gi|450009858|ref|ZP_21828384.1| signal recognition particle protein [Streptococcus mutans A19]
gi|450023214|ref|ZP_21830478.1| signal recognition particle protein [Streptococcus mutans U138]
gi|450116481|ref|ZP_21864528.1| signal recognition particle protein [Streptococcus mutans ST1]
gi|449184857|gb|EMB86770.1| signal recognition particle protein [Streptococcus mutans A9]
gi|449190757|gb|EMB92311.1| signal recognition particle protein [Streptococcus mutans A19]
gi|449193916|gb|EMB95286.1| signal recognition particle protein [Streptococcus mutans U138]
gi|449226962|gb|EMC26427.1| signal recognition particle protein [Streptococcus mutans ST1]
Length = 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|390557792|ref|ZP_10243195.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
gi|390174633|emb|CCF82484.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
Length = 507
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 148/279 (53%), Gaps = 36/279 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+ +FQ I K L + D++ A++ ++ L+ +V A+ E +++ L
Sbjct: 9 LNDVFQRIGKKGTLTEQDVDDAMREVRRALLEADVNFKVVKDFVAAVRERAVGEEVLKAL 68
Query: 363 TP-RRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP ++ I I+RD V P +++ VG+ G GK+T++AK+A L +
Sbjct: 69 TPAQQVISIVRDELINILGSERVPLQTATAPPTIIMLVGLQGSGKTTHIAKLAAHLRKDG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ A D +R A++QL T ++ V ++ +G +++P +AK AIQ A G + V++
Sbjct: 129 KRPLLVAADVYRPAAIDQLETLGAQINVQVYSEGAKENPVKIAKNAIQYARSYGFNPVMI 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+Q +EP+M L L P L V +A+ G +AV+ +F+++L
Sbjct: 189 DTAGRLQIDEPMMLELEHLTEEVEPTETLLVADAMTGQEAVNVAQEFHRRLN-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
+ G++LTK D D + GAALS+ V G P+ F+G G+
Sbjct: 241 --LTGLILTKMDG-DARGGAALSIRSVVGVPIKFIGTGE 276
>gi|227872399|ref|ZP_03990746.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
gi|227841759|gb|EEJ52042.1| signal recognition particle protein Ffh [Oribacterium sinus F0268]
Length = 459
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 154/286 (53%), Gaps = 37/286 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S +FQ+++GK L + D+ ALK ++ L+ +V +A+ E + L
Sbjct: 10 LSDIFQNLSGKGKLSEEDVNLALKEVRMALLEADVNFKLVKDFIAKVKESAIGEEVFSSL 69
Query: 363 TPRRS-IDILRDVHAA-----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+P ++ I I+RD + Q + V++ VG+ G GK+T AK+A +
Sbjct: 70 SPAQTVIKIVRDELTKMMGEENTELKLRPQSEITVLMMVGLQGAGKTTTAAKLAGKFQKQ 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R A+EQLR +A +L +P F G + P +AK+A +EA G ++++
Sbjct: 130 HRKPLLVACDIYRPAAIEQLRVNAEKLSIPFFSLGNQVKPEEIAKKAYEEAKAKGYNLLI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q ++ LM L ++ D + +A+ G +AV+ F++++
Sbjct: 190 LDTAGRLQIDDALMEELKRMKSAVPVDWTILTVDAMTGQEAVNVAESFSKEVG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
++G++L+K D D + GAALS+ ++G P++++G G+ +DL+
Sbjct: 243 ---VNGVILSKCDG-DTRGGAALSIKAMTGQPILYLGMGEKLSDLE 284
>gi|313673049|ref|YP_004051160.1| signal recognition particle-docking protein ftsy [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939805|gb|ADR18997.1| signal recognition particle-docking protein FtsY [Calditerrivibrio
nitroreducens DSM 19672]
Length = 325
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 342 LKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLA 401
LKD + KN A+++ L++IL+ S+ K P+V++ VGVNG GK+T +A
Sbjct: 90 LKDPVELKN--AIKDELIKILSIDNSL--------KKVDTSPFVILVVGVNGTGKTTTIA 139
Query: 402 KVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEA 461
K+A + SV++AA DTFR+ A++QL+ R+ VP+ ++ D A V +A++ A
Sbjct: 140 KLARMFKNNGFSVLLAAGDTFRAAAIDQLQVWGDRIGVPVVKQSEGSDSAAVIYDAVESA 199
Query: 462 TRNGSDVVLVDTAGRMQDNEPLMRALSKLI------YLNNPDLVLFVGEALVGNDAVDQL 515
G+D+V+ DTAGR+ + LM L K++ ++ P VL V +A G +A++Q
Sbjct: 200 KARGNDIVIADTAGRLHNKFNLMNELKKIVKVLGKSVVDAPHEVLLVIDATSGQNAIEQA 259
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+F + + + GI+LTK D K G + +V +G PV F+G G+ DL
Sbjct: 260 KRFKEDVG----------VTGIVLTKLDGT-AKGGVIVGIVDETGIPVKFIGFGEKMDDL 308
Query: 576 KKLNVKSIVKTLLK 589
K + K V L +
Sbjct: 309 KPFDAKLFVDALFE 322
>gi|339448386|ref|ZP_08651942.1| signal recognition particle-docking protein FtsY [Lactobacillus
fructivorans KCTC 3543]
Length = 431
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 17/213 (7%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++FVGVNGVGK+T + K+A Q V+MAA DTFR+GA+EQL A+R V I
Sbjct: 224 PTVILFVGVNGVGKTTTIGKMANNYKQQGKKVLMAAADTFRAGAIEQLDEWAKRDGVDIV 283
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNP 496
+K DPA V EA+ +A + DV+ VDTAGR+Q+ LM L+K+ + P
Sbjct: 284 KKEAGSDPASVVFEAVDKAKKENYDVLFVDTAGRLQNKVNLMNELAKINKVIKREIPAAP 343
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
VL V +A G +A++Q FN+ + D++ GI+LTK D K G +++
Sbjct: 344 QEVLLVIDATTGQNALNQAKMFNE-ITDIT---------GIVLTKLDGT-AKGGIVIAIK 392
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
PV FVG G++ DL+ + K+ + L K
Sbjct: 393 NKLNIPVKFVGLGETVNDLRPFDSKNFIDGLFK 425
>gi|396078060|dbj|BAM31436.1| signal recognition particle protein [Helicobacter cinaedi ATCC
BAA-847]
Length = 447
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 20/239 (8%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++E+L IL ++S I + P V++ +G+ G GK+T+ AK+A +L Q
Sbjct: 70 ALQESLNEILKSKKSYGI------SFSPTPPSVILMMGLQGSGKTTSSAKLALYLKQKGK 123
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP---AIVAKEAIQEATRNGSDVV 469
V++ ACD R A+EQL A ++V IF P VAKEA Q+AT DVV
Sbjct: 124 KVLLVACDLHRLAAIEQLSQLAASIEVDIFTPNQSSKPENAVQVAKEAKQKATNTHYDVV 183
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++D+AGR+ +E LM+ L ++ N L+V ++L G D + FN+K+
Sbjct: 184 IIDSAGRLSIDEALMQELLEIKDSINATECLYVADSLSGQDGIRSAQNFNEKIG------ 237
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++L+KFD+ D K G ALS+ Y G P+ F+G G+ D + I+ L+
Sbjct: 238 ----IDGVILSKFDS-DSKGGIALSIAYQIGVPLKFIGSGEKVADFDVFVPECIISRLM 291
>gi|85860175|ref|YP_462377.1| signal recognition particle GTPase [Syntrophus aciditrophicus SB]
gi|85723266|gb|ABC78209.1| signal recognition particle GTPase [Syntrophus aciditrophicus SB]
Length = 444
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 36/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------------AAMEEALVRI 361
+F+ + G+ LD+ +++ ALK ++ L+ +V A +E L I
Sbjct: 9 LEGVFKRLKGRGRLDEENIKEALKEIRMALLEADVNFKVVKDFIEEVRSRAVGQEVLESI 68
Query: 362 LTPRRSIDILRD-----VHAAKEQ-----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
++ + I+ D + Q R P ++ VG+ G GK+T K+A L +
Sbjct: 69 TPGQQIVKIVHDRLVELLGGTSSQLRFGSRFPAPIMLVGLQGCGKTTTAVKLAKVLAKGG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ + D +R A+EQLR A+++ P F +DP + +A++EA RNG +V+++
Sbjct: 129 KRAGLVSADVYRPAAMEQLRVMAQKIGAPAFNADSSQDPVKICVQAVEEAKRNGYEVLIL 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ + +M L ++ NP +LFV +A+ G DAV+ +KFN+ L
Sbjct: 189 DTAGRLAIDTQMMEELKQIKNAVNPSEILFVADAMTGQDAVNVAAKFNELLG-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG+++TK D D + GAALS+ V G P+ +VG G+ L+ + + + +L
Sbjct: 241 --IDGVIMTKMDG-DARGGAALSLKAVMGKPIKYVGIGEKIDALEVFHPERMASRIL 294
>gi|449886043|ref|ZP_21785923.1| signal recognition particle protein [Streptococcus mutans SA41]
gi|449915593|ref|ZP_21796362.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449944517|ref|ZP_21806769.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449947928|ref|ZP_21807721.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449988781|ref|ZP_21820736.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|450038971|ref|ZP_21835979.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449148475|gb|EMB52342.1| signal recognition particle protein [Streptococcus mutans 11A1]
gi|449156236|gb|EMB59711.1| signal recognition particle protein [Streptococcus mutans 15JP3]
gi|449168107|gb|EMB70945.1| signal recognition particle protein [Streptococcus mutans 11SSST2]
gi|449183439|gb|EMB85422.1| signal recognition particle protein [Streptococcus mutans NVAB]
gi|449200928|gb|EMC01945.1| signal recognition particle protein [Streptococcus mutans T4]
gi|449254689|gb|EMC52587.1| signal recognition particle protein [Streptococcus mutans SA41]
Length = 516
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|422015651|ref|ZP_16362246.1| cell division protein, partial [Providencia burhodogranariea DSM
19968]
gi|414097920|gb|EKT59571.1| cell division protein, partial [Providencia burhodogranariea DSM
19968]
Length = 396
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E +KPYV++ VGVNGVGK+T + K+A +VM+AA DTFR+ AVEQL+ R Q
Sbjct: 188 EDKKPYVILMVGVNGVGKTTTIGKLARQYQSEGKTVMLAAGDTFRAAAVEQLQVWGDRNQ 247
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL----- 493
+P+ + DPA V +AIQ A G DV++ DTAGR+Q+ LM L K++ +
Sbjct: 248 IPVVAQHTGADPASVIFDAIQSAKAKGVDVLIADTAGRLQNKAHLMEELKKIVRVMKKLD 307
Query: 494 -NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P ++ +A G +AV Q FN+ + + GI LTK D K G
Sbjct: 308 EEAPHEIMLTLDASTGQNAVSQAKLFNEAVG----------LTGITLTKLDGT-AKGGVI 356
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ G P+ ++G G+ DL+ ++ L
Sbjct: 357 FSIADQFGIPIRYIGIGEGIEDLRPFKADDFIEALF 392
>gi|387786156|ref|YP_006251252.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449908233|ref|ZP_21793580.1| signal recognition particle protein [Streptococcus mutans OMZ175]
gi|379132557|dbj|BAL69309.1| signal recognition particle protein subunit Ffh [Streptococcus
mutans LJ23]
gi|449263047|gb|EMC60481.1| signal recognition particle protein [Streptococcus mutans OMZ175]
Length = 516
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|186683137|ref|YP_001866333.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
gi|186465589|gb|ACC81390.1| signal recognition particle protein [Nostoc punctiforme PCC 73102]
Length = 488
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ Q KP +V+ G+ G GK+T AK+A L + S ++ A D +R A++QL T
Sbjct: 90 NVPIAEAQEKPTIVLMAGLQGTGKTTATAKLALHLRKLDRSCLLVATDVYRPAAIDQLLT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + DP +A++ ++ A G + V++DTAGR+Q +E +M L+++
Sbjct: 150 LGKQIDVPVFELGSDADPVEIARQGVERARAEGVNTVIIDTAGRLQIDEDMMAELARIKA 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 TVQPHETLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKMDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SGAP+ FVG G+ L+
Sbjct: 259 LSVRKISGAPIKFVGVGEKVEALQ 282
>gi|397649721|ref|YP_006490248.1| signal recognition particle protein [Streptococcus mutans GS-5]
gi|392603290|gb|AFM81454.1| signal recognition particle protein [Streptococcus mutans GS-5]
Length = 516
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|422007534|ref|ZP_16354520.1| cell division protein [Providencia rettgeri Dmel1]
gi|414097424|gb|EKT59079.1| cell division protein [Providencia rettgeri Dmel1]
Length = 622
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E +KPYV++ VGVNGVGK+T + K+A SVM+AA DTFR+ AVEQL+ R +
Sbjct: 414 EDKKPYVILMVGVNGVGKTTTIGKLARQYQSEGKSVMLAAGDTFRAAAVEQLQVWGERNK 473
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL----- 493
+P+ + DPA V +AIQ A G DV++ DTAGR+Q+ LM L K++ +
Sbjct: 474 IPVVAQHTGADPASVIFDAIQSAQAKGVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLD 533
Query: 494 -NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
N P ++ +A G +AV Q F+ + + GI LTK D K G
Sbjct: 534 ENAPHEIMLTLDASTGQNAVSQAKLFDDAVG----------LTGITLTKLDGT-AKGGVI 582
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ G P+ ++G G+ DL+ ++ L
Sbjct: 583 FSIADQFGIPIRYIGIGEGIEDLRPFKADDFIEALF 618
>gi|449982402|ref|ZP_21818256.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|450004868|ref|ZP_21826331.1| signal recognition particle protein [Streptococcus mutans NMT4863]
gi|449174874|gb|EMB77332.1| signal recognition particle protein [Streptococcus mutans 5SM3]
gi|449189437|gb|EMB91104.1| signal recognition particle protein [Streptococcus mutans NMT4863]
Length = 516
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|403667650|ref|ZP_10932950.1| signal recognition particle-like (SRP) component [Kurthia sp. JC8E]
Length = 453
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 12/209 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
R P V++ VG+ G GK+T K+A L + + ++ A D +R AV+QL+T +L +
Sbjct: 99 RPPTVIMMVGLQGAGKTTTTGKLANVLRKKYNKKPLLVAADVYRPAAVKQLQTLGNQLSI 158
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+FEKG + P +A+EAI+ A DVV++DTAGR+ +E LM+ L + + PD V
Sbjct: 159 PVFEKGTDVSPVEIAREAIEFAKEEHHDVVIIDTAGRLHIDETLMQELKDIRAIKEPDEV 218
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
V +A+ G DAV+ FN+ + I G++LTK D D + GAALS+ V+
Sbjct: 219 FLVVDAMTGQDAVNVAESFNEAVG----------ITGVVLTKLDG-DTRGGAALSIRSVT 267
Query: 560 GAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+ FVG G+ L+ + + + + +L
Sbjct: 268 EKPIKFVGMGEKMDALEPFHPERMAQRIL 296
>gi|422731615|ref|ZP_16787973.1| signal recognition particle protein [Enterococcus faecalis TX0645]
gi|422739135|ref|ZP_16794318.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315144939|gb|EFT88955.1| signal recognition particle protein [Enterococcus faecalis TX2141]
gi|315162383|gb|EFU06400.1| signal recognition particle protein [Enterococcus faecalis TX0645]
Length = 472
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P V++ G+ G GK+T K+A L++ ++ A D +R A++QL+
Sbjct: 92 VELNKSSKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++L+VP+F+ G + +P + ++ + A +D VL+DTAGR+ +E LM L ++
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L NP+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAA
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLG----------ITGVVITKMDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+GAP+ FVG G+ TDL+
Sbjct: 261 LSIRAVTGAPIKFVGSGEKLTDLE 284
>gi|373495378|ref|ZP_09585963.1| signal recognition particle protein [Eubacterium infirmum F0142]
gi|371964856|gb|EHO82360.1| signal recognition particle protein [Eubacterium infirmum F0142]
Length = 447
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 36/293 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV---------AAMEEA-----LVRILTPRR 366
F + GK + ++D+ A++ +K L+ +V A ++E +++ LTP +
Sbjct: 14 FSKLKGKGVITESDINAAMREVKLALLEADVNFKVVKEFVAIVKEKCLGAEVLKSLTPAQ 73
Query: 367 SI-----DILRDVHAAKEQRKPY------VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
I L D+ + Y V++ VG+ G GK+T K+A +L Q+ M
Sbjct: 74 QIIKIVNSELIDLMGGAGSKLTYSPSGFTVLMMVGLQGTGKTTTCGKLASFLKQNGKKPM 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL + + P+F KD +A A ++A R G DV+++DTAG
Sbjct: 134 LVACDIYRPAAIDQLEVVGKAVNTPVFTMRESKDAVQIALAAKEDAERKGFDVLIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+Q +E LM L+ + P +L V +AL G DAV+ FN+KL ID
Sbjct: 194 RLQIDESLMEELASMKSAVRPHEILLVVDALTGQDAVNAADGFNRKLG----------ID 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GI++TK D D + GAALS V+G P+ F+G G+ L+ + + + +L
Sbjct: 244 GIIMTKMDG-DSRGGAALSAKKVTGKPIKFLGTGEKSDALEPFHPERLASRIL 295
>gi|345886832|ref|ZP_08838056.1| signal recognition particle protein [Bilophila sp. 4_1_30]
gi|345037925|gb|EGW42423.1| signal recognition particle protein [Bilophila sp. 4_1_30]
Length = 512
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 40/299 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRI------------L 362
SS F+S++G+A L + ++ L+ ++ L+ +V ++E + R+ L
Sbjct: 9 LSSAFRSLSGRAQLTEENIRDGLREVRLALLEADVNFKVVKEFVERVRERVLGQEVEKSL 68
Query: 363 TPRRSIDILRDVH-------------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
TP + + ++ VH +P V++ VG+ G GK+T+ K+A L +
Sbjct: 69 TPTQQL--VKAVHDELVTLLGGETTELNLRGAQPGVIMMVGLQGSGKTTSAGKLANLLRK 126
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
K+ + D +R A++QLRT AR+L +P F + P + + A+++A VV
Sbjct: 127 QKMRPYLVPVDVYRPAAIDQLRTLARQLDIPCFASSADMKPVDIVRAALEDAKEKQCTVV 186
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++DTAGR+ + PLM+ L + P +LFV +A+ G DAV FN+ LA
Sbjct: 187 ILDTAGRLHIDAPLMQELVDIKSAVQPQEILFVADAMTGQDAVTVAEAFNKDLA------ 240
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALS+ V+GA V +VG G+ +DL+ + + + +L
Sbjct: 241 ----LTGVVLTKMDG-DARGGAALSIKSVTGASVKYVGVGEKLSDLEVFHPERVAGRIL 294
>gi|332879559|ref|ZP_08447254.1| signal recognition particle-docking protein FtsY [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|357047219|ref|ZP_09108826.1| signal recognition particle-docking protein FtsY [Paraprevotella
clara YIT 11840]
gi|332682525|gb|EGJ55427.1| signal recognition particle-docking protein FtsY [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|355529820|gb|EHG99245.1| signal recognition particle-docking protein FtsY [Paraprevotella
clara YIT 11840]
Length = 318
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 47/308 (15%)
Query: 313 KTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA---------MEEALVR--I 361
K +F + +++AGK+ +D + L L++ L+T +V +E+ + R
Sbjct: 23 KESFFGKLTRAVAGKSKVD----DDVLDRLEEVLVTSDVGVDTTLNIIDRIEKRVARDKY 78
Query: 362 LTPRRSIDILRDVHAA---------------KEQRKPYVVVFVGVNGVGKSTNLAKVAYW 406
+T DILRD A+ E +KPYV++ VGVNGVGK+T + K+AY
Sbjct: 79 VTVNELNDILRDEIASLLTENNTADTEGFVLPEGKKPYVIMVVGVNGVGKTTTIGKLAYQ 138
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGS 466
+ V + A DTFR+ AVEQL + R+ VPI ++ DPA VA + + A NG+
Sbjct: 139 FKKAGKKVYLGASDTFRAAAVEQLEIWSERVGVPIVKQQMGSDPASVAFDTLSSAMANGA 198
Query: 467 DVVLVDTAGRMQDNEPLMRALSKL------IYLNNPDLVLFVGEALVGNDAVDQLSKFNQ 520
DVVL+DTAGR+ + + LM LSK+ + + P V+ V + G +A +Q +F
Sbjct: 199 DVVLIDTAGRLHNKKGLMDELSKIKRVMQKVVPDAPHDVMLVLDGSTGQNAFEQAKQFT- 257
Query: 521 KLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNV 580
LA +S +DG K G + + PV ++G G+ DL+ N
Sbjct: 258 -LATEVTSMAITKLDGTA---------KGGVVIGISDQFKIPVRYIGLGEGVEDLQPFNR 307
Query: 581 KSIVKTLL 588
K VK+L
Sbjct: 308 KEFVKSLF 315
>gi|317484960|ref|ZP_07943844.1| signal recognition particle protein [Bilophila wadsworthia 3_1_6]
gi|316923765|gb|EFV44967.1| signal recognition particle protein [Bilophila wadsworthia 3_1_6]
Length = 512
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 40/299 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--AAMEEALVRI------------L 362
SS F+S++G+A L + ++ L+ ++ L+ +V ++E + R+ L
Sbjct: 9 LSSAFRSLSGRAQLTEENIRDGLREVRLALLEADVNFKVVKEFVERVRERVLGQKVEKSL 68
Query: 363 TPRRSIDILRDVH-------------AAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
TP + + ++ VH +P V++ VG+ G GK+T+ K+A L +
Sbjct: 69 TPTQQL--VKAVHDELVTLLGGETTELNLRGAQPGVIMMVGLQGSGKTTSAGKLANLLRK 126
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
K+ + D +R A++QLRT AR+L +P F + P + + A+++A VV
Sbjct: 127 QKMRPYLVPVDVYRPAAIDQLRTLARQLDIPCFASSADMKPVDIVRAALEDAKEKQCTVV 186
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++DTAGR+ + PLM+ L + P +LFV +A+ G DAV FN+ LA
Sbjct: 187 ILDTAGRLHIDAPLMQELVDIKSAVQPQEILFVADAMTGQDAVTVAEAFNKDLA------ 240
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALS+ V+GA V +VG G+ +DL+ + + + +L
Sbjct: 241 ----LTGVVLTKMDG-DARGGAALSIKSVTGASVKYVGVGEKLSDLEVFHPERVAGRIL 294
>gi|172038385|ref|YP_001804886.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|354554267|ref|ZP_08973572.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
gi|171699839|gb|ACB52820.1| signal recognition particle protein [Cyanothece sp. ATCC 51142]
gi|353553946|gb|EHC23337.1| signal recognition particle protein [Cyanothece sp. ATCC 51472]
Length = 489
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + + + +M A D +R A++QL T
Sbjct: 90 NVPLAQAENAPTVILMAGLQGTGKTTATAKLALYLRKQQRTALMVATDIYRPAAIDQLVT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++VP+FE G + +P +A + +++A G D V++DTAGR+Q +E +M L+++
Sbjct: 150 LGEQIEVPVFELGNQANPVDIATQGVEKAKEMGIDTVIIDTAGRLQIDEEMMLELARVKK 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
NPD L V +A+ G +A + F+ ++ + G +LTK D D + GAA
Sbjct: 210 AVNPDDTLLVVDAMTGQEAANLTRTFHDQIG----------VTGAILTKMDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALQ 282
>gi|116621691|ref|YP_823847.1| signal recognition particle subunit FFH/SRP54 (srp54) [Candidatus
Solibacter usitatus Ellin6076]
gi|116224853|gb|ABJ83562.1| signal recognition particle subunit FFH/SRP54 (srp54) [Candidatus
Solibacter usitatus Ellin6076]
Length = 455
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 154/291 (52%), Gaps = 41/291 (14%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+++ G+ L ++E AL+ ++ L+ +V A+ E ++ L
Sbjct: 9 LQRVFKNLRGEGKLSAENMETALREIRMALLEADVNFKVVKQLIENIKQKAVGEEVLNAL 68
Query: 363 TPRRSIDILRDVH-------AAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+P S +++ VH + E + P V + VG+ G GK+T+ K+A WL +
Sbjct: 69 SP--SQQVIKIVHEELIKILGSHESKLRYANDPPSVFMIVGLQGSGKTTSTGKLARWLSK 126
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY-EKDPAIVAKEAIQEATRNGSDV 468
+ + M+ + D +R A EQL+ AR ++ PI+E E P +A+ A +EAT +G DV
Sbjct: 127 NGHAPMVVSVDVYRPAAREQLKVVARDVKQPIYEGAPGETAPLDLARSARREATNSGRDV 186
Query: 469 VLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSS 528
+LVDTAGR+ ++ LM L +L NP +LFV +A+ G DAV +F+++L
Sbjct: 187 LLVDTAGRLHIDDDLMVELQQLKEQLNPVEILFVADAMTGQDAVKSADEFHKRLG----- 241
Query: 529 PNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I G++LTK D D + GAALS+ V+G P+ FVG G+ L+ +
Sbjct: 242 -----ITGVILTKMDG-DARGGAALSIRSVTGQPLKFVGVGEKLDALEAFH 286
>gi|422692890|ref|ZP_16750905.1| signal recognition particle protein [Enterococcus faecalis TX0031]
gi|315152349|gb|EFT96365.1| signal recognition particle protein [Enterococcus faecalis TX0031]
Length = 472
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P V++ G+ G GK+T K+A L++ ++ A D +R A++QL+
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++L+VP+F+ G + +P + ++ + A +D VL+DTAGR+ +E LM L ++
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L NP+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAA
Sbjct: 212 LTNPNEILLVVDAMTGQDAVNVAVSFNEQLG----------ITGVVITKMDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+GAP+ FVG G+ TDL+
Sbjct: 261 LSIRAVTGAPIKFVGSGEKLTDLE 284
>gi|450046423|ref|ZP_21838937.1| signal recognition particle protein [Streptococcus mutans N34]
gi|449198865|gb|EMB99957.1| signal recognition particle protein [Streptococcus mutans N34]
Length = 516
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|428200946|ref|YP_007079535.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
gi|427978378|gb|AFY75978.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pleurocapsa
sp. PCC 7327]
Length = 486
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + + +M A D +R A++QL T
Sbjct: 90 NVPLAQADKPPTVILMAGLQGTGKTTATAKLALYLRKQNQTCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + DP +A+ ++ A G D VL+DTAGR+Q + +M L+++
Sbjct: 150 LGQQIDVPVFEMGSDADPVEIARAGVERAKEMGIDTVLIDTAGRLQIDRDMMAELARIKA 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
NP L V +A+ G +A + F +++ I G +LTK D D + GAA
Sbjct: 210 TVNPHDTLLVVDAMTGQEAANLTRTFQEQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ VSG P+ FVG G+ L+
Sbjct: 259 LSVRQVSGQPIKFVGVGEKVEALQ 282
>gi|139473726|ref|YP_001128442.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
gi|134271973|emb|CAM30211.1| signal recognition particle protein [Streptococcus pyogenes str.
Manfredo]
Length = 520
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+ I GK L ++D++ K ++ L+ +VA A+ ++
Sbjct: 7 TQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEII 66
Query: 360 RILTPRRSI---------DILRDVHAA--KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I IL A K + P +++ VG+ G GK+T + K+A L+
Sbjct: 67 NTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGAGKTTFVGKLANKLI 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G + + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQARENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L P+ +L V ++++G +A + +FN +L+
Sbjct: 187 YVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQLS---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------ITGVVLTKIDG-DTRGGAALSVREITGKPIKFTGIGEKITDIETFH 287
>gi|449891169|ref|ZP_21787773.1| signal recognition particle protein [Streptococcus mutans SF12]
gi|449256864|gb|EMC54676.1| signal recognition particle protein [Streptococcus mutans SF12]
Length = 516
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ +G+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMIGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|417886283|ref|ZP_12530430.1| signal recognition particle protein [Lactobacillus oris F0423]
gi|341593781|gb|EGS36606.1| signal recognition particle protein [Lactobacillus oris F0423]
Length = 480
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L + M A D +R A+ QL+ A ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAITQLQQVADQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FEKG + DP + +E ++ A +N +D V++DTAGR+Q +E LM L+ + L NPD +L
Sbjct: 161 FEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPDEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +++ G +AV+ F+ KL I G++LTK D D + GAA+S+ V+G
Sbjct: 221 VIDSMTGQNAVNTAQGFDDKLD----------ITGVILTKLDG-DTRGGAAMSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGEGEKMADL 283
>gi|312869933|ref|ZP_07730072.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
gi|311094518|gb|EFQ52823.1| signal recognition particle protein [Lactobacillus oris PB013-T2-3]
Length = 480
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L + M A D +R A+ QL+ A ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNEDHARPMFIAADVYRPAAITQLQQVADQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FEKG + DP + +E ++ A +N +D V++DTAGR+Q +E LM L+ + L NPD +L
Sbjct: 161 FEKGTDVDPVEIVREGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPDEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +++ G +AV+ F+ KL I G++LTK D D + GAA+S+ V+G
Sbjct: 221 VIDSMTGQNAVNTAQGFDDKLD----------ITGVILTKLDG-DTRGGAAMSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGEGEKMADL 283
>gi|313144814|ref|ZP_07807007.1| signal recognition particle protein [Helicobacter cinaedi CCUG
18818]
gi|386760982|ref|YP_006234617.1| signal recognition particle protein [Helicobacter cinaedi PAGU611]
gi|313129845|gb|EFR47462.1| signal recognition particle protein [Helicobacter cinaedi CCUG
18818]
gi|385145998|dbj|BAM11506.1| signal recognition particle protein [Helicobacter cinaedi PAGU611]
Length = 447
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 20/239 (8%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++E+L IL ++S I + P V++ +G+ G GK+T+ AK+A +L Q
Sbjct: 70 ALQESLNEILKSKKSYGI------SFSPTPPSVILMMGLQGSGKTTSSAKLALYLKQKGK 123
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP---AIVAKEAIQEATRNGSDVV 469
V++ ACD R A+EQL A ++V IF P VAKEA Q+AT DVV
Sbjct: 124 KVLLVACDLHRLAAIEQLSQLAASIEVDIFTPNQSSKPENAVQVAKEAKQKATNTHYDVV 183
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++D+AGR+ +E LM+ L ++ N L+V ++L G D + FN+K+
Sbjct: 184 IIDSAGRLSIDEALMQELLEIKDSINATECLYVADSLSGQDGIRSAQNFNEKIG------ 237
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++L+KFD+ D K G ALS+ Y G P+ F+G G+ D + I+ L+
Sbjct: 238 ----IDGVILSKFDS-DSKGGIALSIAYQIGVPLKFIGSGEKVADFDVFVPERIISRLM 291
>gi|319901661|ref|YP_004161389.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
gi|319416692|gb|ADV43803.1| signal recognition particle subunit FFH/SRP54 (srp54) [Bacteroides
helcogenes P 36-108]
Length = 440
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP V++ G+ G GK+T K+A L K ++ ACD +R A+EQLR A +++VP
Sbjct: 98 KPSVILMSGLQGSGKTTFSGKLARMLKAKKNRKPLLVACDVYRPAAIEQLRVLAEQIEVP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++ + KDP +A+ AIQEA G D+V+VDTAGR+ +E +M ++ + +P+ +L
Sbjct: 158 MYSEPDSKDPVTIAQNAIQEAKEKGYDLVIVDTAGRLAVDEEMMNEIAAIKKAIDPNEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +++ G DAV+ +FN++L +G++LTK D D + GAALS+ V
Sbjct: 218 FVVDSMTGQDAVNTAKEFNERLD----------FNGVILTKLDG-DTRGGAALSIRSVVN 266
Query: 561 APVMFVGCGQ 570
P+ FVG G+
Sbjct: 267 KPIKFVGTGE 276
>gi|297620933|ref|YP_003709070.1| Signal recognition 54 kDa protein Ffh [Waddlia chondrophila WSU
86-1044]
gi|297376234|gb|ADI38064.1| Signal recognition 54 kDa protein Ffh [Waddlia chondrophila WSU
86-1044]
gi|337293245|emb|CCB91236.1| Signal recognition particle protein [Waddlia chondrophila 2032/99]
Length = 442
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 157/301 (52%), Gaps = 37/301 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALV 359
T +F I GK+ L + ++ A+ ++ L+ +V ++ +A++
Sbjct: 6 TDKMQDLFSKITGKSKLTEENIAEAVSEVRLALLEADVNYSVAKVLVKRLKEKSLGDAVL 65
Query: 360 RILTP-RRSIDILRD----VHAAKE-----QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
+ ++P ++ I I+ D + +E + KP VV+ G+ G GK+T AK+A +L +
Sbjct: 66 KSISPGQQFIKIVHDELIELMGGEEAPLDLKSKPAVVMMCGLQGSGKTTQCAKLANYLKK 125
Query: 410 HKVS--VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
K ++AACD R A+EQL+T ++ VP+F E P VAK A++ A + G D
Sbjct: 126 QKKCRQPLLAACDLQRPAAIEQLKTLGGKIGVPVFSIPNENSPVKVAKAALERARQEGFD 185
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
++++DTAGR+ ++ LM L ++ P +LFV A G DAV S+FNQK+
Sbjct: 186 LLILDTAGRLHIDDELMDQLQQIKQATKPHEILFVANAATGQDAVTVASEFNQKVE---- 241
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
+ G +LT D+ + + GAA+S+ V+G P+ F G G+ D++ N S+ +
Sbjct: 242 ------VTGTILTMLDS-NTRGGAAISIREVTGKPLKFEGVGEKIDDIQPFNPNSMADRI 294
Query: 588 L 588
L
Sbjct: 295 L 295
>gi|422865505|ref|ZP_16912130.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
gi|327489572|gb|EGF21364.1| signal recognition particle protein [Streptococcus sanguinis
SK1058]
Length = 524
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 152/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + + D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 -QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ K +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEEKARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|291546242|emb|CBL19350.1| signal recognition particle protein [Ruminococcus sp. SR1/5]
Length = 450
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 154/291 (52%), Gaps = 37/291 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLM------------TKNVA--AMEEALV 359
T ++F+ + GK L +AD++ ALK +K L+ TK+V A+ + ++
Sbjct: 7 TDKLQNVFKKLKGKGRLTEADVKVALKEVKMALLEADVNFKVVKQFTKSVQEKAIGQDVM 66
Query: 360 RILTPRRSI-----DILRDVHAAKEQRKPY-------VVVFVGVNGVGKSTNLAKVAYWL 407
L P + + D L ++ ++ P V++ VG+ G GK+T +AK+A L
Sbjct: 67 NGLNPGQMVIKIVNDELVNLMGSETTELPIKPGMDLTVLMMVGLQGAGKTTTVAKLAGKL 126
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
++ ACD +R A+ QL+ + + V +F G +++P +AK AI+ A N +
Sbjct: 127 KSKGKRPLLVACDVYRPAAITQLQVNGEKQGVEVFSMGDKQNPVDIAKAAIEHAKSNQQN 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VVL+DTAGR+ +E +M+ L + N D + V +A+ G DAV+ F+ K+
Sbjct: 187 VVLIDTAGRLHIDEDMMQELEDIKANVNVDATVLVVDAMTGQDAVNVAQNFSDKVG---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKL 578
IDG++LTK D D + GAALS+ V+G P+ +VG G+ +DL++
Sbjct: 243 ------IDGVILTKMDG-DTRGGAALSIKAVTGKPIFYVGMGEKLSDLEQF 286
>gi|422021681|ref|ZP_16368191.1| cell division protein [Providencia sneebia DSM 19967]
gi|414098278|gb|EKT59927.1| cell division protein [Providencia sneebia DSM 19967]
Length = 516
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 379 EQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E +KPYV++ VGVNGVGK+T + K+A SVM+AA DTFR+ AVEQL+ R +
Sbjct: 308 EGKKPYVILMVGVNGVGKTTTIGKLARQYQSEGKSVMLAAGDTFRAAAVEQLQVWGERNR 367
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL----- 493
+P+ + DPA V +AIQ A G DV++ DTAGR+Q+ LM L K++ +
Sbjct: 368 IPVVAQHTGADPASVIFDAIQSAQAKGVDVLIADTAGRLQNKAHLMEELKKIVRVMKKLD 427
Query: 494 -NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ P ++ +A G +AV Q FN+ + + GI LTK D K G
Sbjct: 428 EDAPHEIMLTLDASTGQNAVSQAKLFNEAVG----------LTGITLTKLDGT-AKGGVI 476
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
S+ G P+ ++G G+ DL+ ++ L
Sbjct: 477 FSIADQFGIPIRYIGIGEGIEDLRPFKADDFIEALF 512
>gi|352516955|ref|YP_004886272.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
gi|348601062|dbj|BAK94108.1| signal recognition particle protein [Tetragenococcus halophilus
NBRC 12172]
Length = 475
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 117/200 (58%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T K+A L++++ MM A D +R AV+QL+ ++
Sbjct: 96 KAPKIPTVIMMAGLQGAGKTTFAGKLANHLIKNENARPMMIAGDVYRPAAVDQLKVLGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L VP+FE G E+ P + ++ ++ A +D VL+DTAGR+ +E LM L + + P
Sbjct: 156 LDVPVFEMGTEESPVEIVRQGMELAHEKKNDYVLIDTAGRLHVDEALMEELQDIKDIAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAALS+
Sbjct: 216 NEILLVVDAMTGQDAVNVAESFNEQLG----------ISGVVITKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+GAP+ F G G+ TD++
Sbjct: 265 SVTGAPIKFTGIGEKLTDME 284
>gi|340355026|ref|ZP_08677720.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
gi|339622823|gb|EGQ27336.1| signal recognition particle protein [Sporosarcina newyorkensis
2681]
Length = 451
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 156/293 (53%), Gaps = 41/293 (13%)
Query: 324 IAGKANLDKADLEPA--------------LKALKDRLMTKNVAAMEEALVRILTP-RRSI 368
I GK +++AD++ LK +K + T + A+ + +++ LTP ++ +
Sbjct: 17 ITGKGKINEADVKEMMREVRFALIEADVNLKVVKSFVKTVSERAVGQDVMKSLTPGQQVV 76
Query: 369 DILRD------------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVM 415
I++D + A+ + P V++ VG+ G GK+T K+A L + H + +
Sbjct: 77 KIVKDELTNLMGGEQNPIQFAR--KSPTVIMMVGLQGAGKTTTTGKLATVLRKKHNKNPL 134
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ A D +R A++QL T +++ +P+F G ++ P +A+ A++EA + +DVV++DTAG
Sbjct: 135 LVAADIYRPAAIQQLETLGKQISIPVFSMGTDQSPVEIARRAMEEAEKEHNDVVIIDTAG 194
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM+ L + L PD V V +A+ G DAV+ F++ + I
Sbjct: 195 RLHVDEKLMQELKDIRELTKPDEVFLVVDAMTGQDAVNVAKSFDEMIG----------IT 244
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G++LTK D D + GAALS+ V+ P+ FVG G+ L+ + + + +L
Sbjct: 245 GVVLTKLDG-DTRGGAALSIRSVTEKPIKFVGMGEKMDALEPFHPERMASRIL 296
>gi|229545688|ref|ZP_04434413.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255975716|ref|ZP_05426302.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256619193|ref|ZP_05476039.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256853255|ref|ZP_05558625.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|257082423|ref|ZP_05576784.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|257085055|ref|ZP_05579416.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|257090014|ref|ZP_05584375.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257416220|ref|ZP_05593214.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257422483|ref|ZP_05599473.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|300860172|ref|ZP_07106259.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|307275840|ref|ZP_07556979.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|307289238|ref|ZP_07569194.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|307291863|ref|ZP_07571734.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|312901896|ref|ZP_07761161.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|422685856|ref|ZP_16744069.1| signal recognition particle protein, partial [Enterococcus faecalis
TX4000]
gi|422689235|ref|ZP_16747347.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|422695111|ref|ZP_16753099.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|422699083|ref|ZP_16756956.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|422701890|ref|ZP_16759730.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|422704606|ref|ZP_16762416.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|422706535|ref|ZP_16764233.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|422720786|ref|ZP_16777395.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|422728773|ref|ZP_16785179.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|424761189|ref|ZP_18188771.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|428767136|ref|YP_007153247.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
gi|229309138|gb|EEN75125.1| signal recognition particle protein [Enterococcus faecalis TX1322]
gi|255968588|gb|EET99210.1| signal recognition particle protein [Enterococcus faecalis T2]
gi|256598720|gb|EEU17896.1| signal recognition particle protein [Enterococcus faecalis ATCC
4200]
gi|256711714|gb|EEU26752.1| signal recognition particle protein [Enterococcus faecalis T8]
gi|256990453|gb|EEU77755.1| signal recognition particle protein [Enterococcus faecalis E1Sol]
gi|256993085|gb|EEU80387.1| signal recognition particle protein [Enterococcus faecalis Fly1]
gi|256998826|gb|EEU85346.1| signal recognition particle protein [Enterococcus faecalis CH188]
gi|257158048|gb|EEU88008.1| signal recognition particle protein [Enterococcus faecalis ARO1/DG]
gi|257164307|gb|EEU94267.1| signal recognition particle protein [Enterococcus faecalis X98]
gi|295113085|emb|CBL31722.1| signal recognition particle subunit FFH/SRP54 (srp54) [Enterococcus
sp. 7L76]
gi|300849211|gb|EFK76961.1| signal recognition particle protein [Enterococcus faecalis TUSoD
Ef11]
gi|306497129|gb|EFM66675.1| signal recognition particle protein [Enterococcus faecalis TX0411]
gi|306499947|gb|EFM69308.1| signal recognition particle protein [Enterococcus faecalis TX0109]
gi|306507532|gb|EFM76663.1| signal recognition particle protein [Enterococcus faecalis TX2134]
gi|311291089|gb|EFQ69645.1| signal recognition particle protein [Enterococcus faecalis TX0470]
gi|315029568|gb|EFT41500.1| signal recognition particle protein [Enterococcus faecalis TX4000]
gi|315032040|gb|EFT43972.1| signal recognition particle protein [Enterococcus faecalis TX0017]
gi|315147394|gb|EFT91410.1| signal recognition particle protein [Enterococcus faecalis TX4244]
gi|315150780|gb|EFT94796.1| signal recognition particle protein [Enterococcus faecalis TX0012]
gi|315156150|gb|EFU00167.1| signal recognition particle protein [Enterococcus faecalis TX0043]
gi|315163852|gb|EFU07869.1| signal recognition particle protein [Enterococcus faecalis TX1302]
gi|315169591|gb|EFU13608.1| signal recognition particle protein [Enterococcus faecalis TX1342]
gi|315172461|gb|EFU16478.1| signal recognition particle protein [Enterococcus faecalis TX1346]
gi|315577856|gb|EFU90047.1| signal recognition particle protein [Enterococcus faecalis TX0630]
gi|402402452|gb|EJV35168.1| signal recognition particle protein [Enterococcus faecalis R508]
gi|427185309|emb|CCO72533.1| signal recognition particle protein [Enterococcus faecalis str.
Symbioflor 1]
Length = 472
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P V++ G+ G GK+T K+A L++ ++ A D +R A++QL+
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++L+VP+F+ G + +P + ++ + A +D VL+DTAGR+ +E LM L ++
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L NP+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAA
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLG----------ITGVVITKMDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+GAP+ FVG G+ TDL+
Sbjct: 261 LSIRAVTGAPIKFVGSGEKLTDLE 284
>gi|332638237|ref|ZP_08417100.1| signal recognition particle protein [Weissella cibaria KACC 11862]
Length = 488
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L + +M A D +R A++QL+T ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALKLKSEQNARPLMIAADVYRPAAIDQLKTLGEQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FE G + DP + ++ + +A SD V +D AGR+Q +E LM+ L+ + + PD +L
Sbjct: 161 FEMGTDADPRDIVRQGLAKAAELKSDYVFIDAAGRLQIDEALMQELADVKEIAQPDEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +A+ G +AV+ FN++L + G++LTK D D + GAALS+ V+G
Sbjct: 221 VVDAMTGQNAVETAEGFNERLD----------VTGVVLTKLDG-DTRGGAALSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ TDL
Sbjct: 270 PIKFVGQGEKMTDL 283
>gi|300811712|ref|ZP_07092186.1| signal recognition particle protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300497288|gb|EFK32336.1| signal recognition particle protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 476
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 339 LKALKDRLMTKNVAAMEEALVRILTP-RRSIDILRD----------VHAAKEQRKPYVVV 387
K +KD + T A+ + + LTP ++ I I+ + V K P V++
Sbjct: 46 FKVVKDFIKTIKKRALGQEVQESLTPGQQVIKIVNEELTKMMGEEAVGLTKSPHIPTVIM 105
Query: 388 FVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 446
VG+ G GK+T + K+AY L+ + K + A D +R A++QL+ L+VP++
Sbjct: 106 MVGLQGTGKTTTVGKLAYRLMKEEKARPFLIAGDIYRPAAIDQLKQIGADLKVPVYSDPE 165
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
EK A + ++ + EA + +D V++DTAGR++ +EPLM+ L ++ ++ PD +L V +A+
Sbjct: 166 EKSVAKIVEDGLAEAAVHRNDYVIIDTAGRLEIDEPLMKELEEVKAVSQPDNILLVVDAM 225
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
G A D FN++L + G++LTK D D + GAALS+ ++G P++F
Sbjct: 226 TGQAAADVAQTFNERLD----------VTGVILTKLDG-DTRGGAALSIRAITGKPILFT 274
Query: 567 GCGQSYTDLK 576
G G+ TDL+
Sbjct: 275 GQGEKLTDLE 284
>gi|222615533|gb|EEE51665.1| hypothetical protein OsJ_33001 [Oryza sativa Japonica Group]
Length = 550
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T AK+A++L + S M+ A D +R A++QL ++ VP++
Sbjct: 170 PTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGEQVGVPVY 229
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G E PA + K A++EA R D +++DTAGR+Q ++ +M L ++ NP VL V
Sbjct: 230 SEGTEAKPAQITKNAVEEAKRKNIDAIVMDTAGRLQIDKSMMVELKEVKKAVNPTEVLLV 289
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A ++ FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 290 VDAMTGQEAAALVTTFNIEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGKP 338
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ DL+
Sbjct: 339 IKFVGRGERMEDLE 352
>gi|154147877|ref|YP_001406144.1| signal recognition particle protein [Campylobacter hominis ATCC
BAA-381]
gi|153803886|gb|ABS50893.1| signal recognition particle protein [Campylobacter hominis ATCC
BAA-381]
Length = 444
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P VV+ G+ G GK+T K+A +L K V++AACD R AVEQLR ++
Sbjct: 92 QNPTVVLMAGLQGSGKTTTTVKLANYLKLRKKKVLIAACDLQRLAAVEQLRQLCEANEIE 151
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F EK+P VAKEAI +A + DV+L+DTAGR+ +E LM L ++ ++NPD +
Sbjct: 152 LFYIENEKNPKKVAKEAILKAKKGLYDVLLIDTAGRLAIDEELMDELKEIKKISNPDEIF 211
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
+V +A+ G D V + FN+KL I G++L+KFD D K G AL +
Sbjct: 212 YVADAMSGQDGVRSAANFNEKLG----------ISGVILSKFDA-DTKGGVALGIAKQLN 260
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
P+ F+G G+ D + + IV ++
Sbjct: 261 IPLRFIGTGEKIADFEGFIPERIVSRIM 288
>gi|428781665|ref|YP_007173451.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
gi|428695944|gb|AFZ52094.1| signal recognition particle protein [Dactylococcopsis salina PCC
8305]
Length = 484
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 36/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S ++ + G+ + ++++PAL+ ++ L++ +V AA ++ +
Sbjct: 9 LESAWKKLRGQDKITSSNIKPALQEIRRSLLSADVNLQVVKTFIADVEKAAQGADVISGV 68
Query: 363 TP-RRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
P ++ I I+ D V A+ + P +++ G+ G GK+T AK+A L +
Sbjct: 69 RPDQQFIKIVNDELVKVMGESNVPLAQAETPPTIILMAGLQGTGKTTATAKLALHLRKQN 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
S +M D +R A++QL+T ++ VP+FE G E +P VAK+ +++A +G D V++
Sbjct: 129 RSALMVGTDVYRPAAIDQLKTLGEQIDVPVFEMGTEANPVEVAKQGVEKAKTDGIDTVII 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+Q ++ +M L + +P VL V +A+ G +A F+Q++
Sbjct: 189 DTAGRLQIDQNMMGELIAVKKAISPHEVLLVVDAMTGQEAASLTDTFHQQVG-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+ G +LTK D D + GAALS+ VSG P+ F+G G+ L+
Sbjct: 241 --VTGAILTKLDG-DTRGGAALSVRQVSGQPIKFIGVGEKVEALQ 282
>gi|307151061|ref|YP_003886445.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
gi|306981289|gb|ADN13170.1| signal recognition particle protein [Cyanothece sp. PCC 7822]
Length = 487
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 116/204 (56%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ P V++ G+ G GK+T AK+A +L + S +M A D +R A++QL T
Sbjct: 90 NVPLAQASTPPTVILMAGLQGTGKTTATAKLALFLRKENRSCLMVATDVYRPAAIDQLIT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G E DP +A++ +Q+A G D V++DTAGR+Q +E +M L+++
Sbjct: 150 LGQQIDVPVFELGTEADPVEIARQGVQKAKELGVDTVIIDTAGRLQIDEDMMAELARIKA 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P L V +++ G +A F++++ I G +LTK D D + GAA
Sbjct: 210 TVKPHDTLLVVDSMTGQEAATLTHTFHEQIG----------ITGAILTKLDG-DTRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ VSG P+ FVG G+ L+
Sbjct: 259 LSVRQVSGQPIKFVGVGEKVEALQ 282
>gi|418035098|ref|ZP_12673557.1| hypothetical protein LDBUL1519_00257 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354691036|gb|EHE90976.1| hypothetical protein LDBUL1519_00257 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 476
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 339 LKALKDRLMTKNVAAMEEALVRILTP-RRSIDILRD----------VHAAKEQRKPYVVV 387
K +KD + T A+ + + LTP ++ I I+ + V K P V++
Sbjct: 46 FKVVKDFIKTIKKRALGQEVQESLTPGQQVIKIVNEELTKMMGEEAVGLTKSPHIPTVIM 105
Query: 388 FVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 446
VG+ G GK+T + K+AY L+ + K + A D +R A++QL+ L+VP++
Sbjct: 106 MVGLQGTGKTTTVGKLAYRLMKEEKARPFLIAGDIYRPAAIDQLKQIGADLKVPVYSDPE 165
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
EK A + ++ + EA + +D V++DTAGR++ +EPLM+ L ++ ++ PD +L V +A+
Sbjct: 166 EKSVAKIVEDGLAEAAVHRNDYVIIDTAGRLEIDEPLMKELEEVKAVSQPDNILLVVDAM 225
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
G A D FN++L + G++LTK D D + GAALS+ ++G P++F
Sbjct: 226 TGQAAADVAKTFNERLD----------VTGVILTKLDG-DTRGGAALSIRAITGKPILFT 274
Query: 567 GCGQSYTDLK 576
G G+ TDL+
Sbjct: 275 GQGEKLTDLE 284
>gi|312903448|ref|ZP_07762628.1| signal recognition particle protein [Enterococcus faecalis TX0635]
gi|310633324|gb|EFQ16607.1| signal recognition particle protein [Enterococcus faecalis TX0635]
Length = 472
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P V++ G+ G GK+T K+A L++ ++ A D +R A++QL+
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++L+VP+F+ G + +P + ++ + A +D VL+DTAGR+ +E LM L ++
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L NP+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAA
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLG----------ITGVVITKMDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+GAP+ FVG G+ TDL+
Sbjct: 261 LSIRAVTGAPIKFVGSGEKLTDLE 284
>gi|160892009|ref|ZP_02073012.1| hypothetical protein BACUNI_04468 [Bacteroides uniformis ATCC 8492]
gi|270296343|ref|ZP_06202543.1| signal recognition particle protein [Bacteroides sp. D20]
gi|317480461|ref|ZP_07939556.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|423303310|ref|ZP_17281309.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|423307968|ref|ZP_17285958.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
gi|156858487|gb|EDO51918.1| signal recognition particle protein [Bacteroides uniformis ATCC
8492]
gi|270273747|gb|EFA19609.1| signal recognition particle protein [Bacteroides sp. D20]
gi|316903376|gb|EFV25235.1| signal recognition particle protein [Bacteroides sp. 4_1_36]
gi|392688540|gb|EIY81825.1| signal recognition particle protein [Bacteroides uniformis
CL03T00C23]
gi|392688953|gb|EIY82236.1| signal recognition particle protein [Bacteroides uniformis
CL03T12C37]
Length = 440
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 113/190 (59%), Gaps = 12/190 (6%)
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVP 440
KP +++ G+ G GK+T K+A L K ++ ACD +R A+EQLR A ++ VP
Sbjct: 98 KPAIILMSGLQGSGKTTFSGKLARMLKSKKNKKPLLVACDVYRPAAIEQLRVLAEQIDVP 157
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
++ + K+P +A+ AIQEA G D+V+VDTAGR+ +E +M ++ + NPD +L
Sbjct: 158 MYSEPDSKNPVAIAQNAIQEAKAKGYDLVIVDTAGRLAVDEEMMNEIAAIKKAINPDEIL 217
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +++ G DAV+ +FN++L +G++LTK D D + GAALS+ V
Sbjct: 218 FVVDSMTGQDAVNTAKEFNERLD----------FNGVVLTKLDG-DTRGGAALSIRSVVN 266
Query: 561 APVMFVGCGQ 570
P+ FVG G+
Sbjct: 267 KPIKFVGTGE 276
>gi|154148594|ref|YP_001406877.1| signal recognition particle-docking protein FtsY [Campylobacter
hominis ATCC BAA-381]
gi|153804603|gb|ABS51610.1| signal recognition particle-docking protein FtsY [Campylobacter
hominis ATCC BAA-381]
Length = 288
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 17/215 (7%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
Q KP+V + +GVNG GK+T++AK+A + SV++ ACDTFR+GA+EQL+ A +++V
Sbjct: 80 QSKPFVELILGVNGAGKTTSIAKLANLYKKSGKSVILGACDTFRAGAIEQLKLWAEKIEV 139
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------ 493
PI DPA VA + I A D VL+DTAGR+Q+ + L + L K++ +
Sbjct: 140 PIVATAQGHDPAAVAFDTISSAVAKKIDNVLIDTAGRLQNQKNLAKELEKIVRISAKALS 199
Query: 494 NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAAL 553
+ P + + +A GN++V Q FN+ IDGI++TK D K GA
Sbjct: 200 SAPHRKIIILDATQGNNSVIQAKAFNEIAK----------IDGIIITKLDG-TPKGGALF 248
Query: 554 SMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ P++++G G+ DL + N ++ V+TL+
Sbjct: 249 GIARELEIPILYIGVGEKMEDLIEFNAQNFVETLV 283
>gi|307277934|ref|ZP_07559018.1| signal recognition particle protein [Enterococcus faecalis TX0860]
gi|306505331|gb|EFM74517.1| signal recognition particle protein [Enterococcus faecalis TX0860]
Length = 472
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P V++ G+ G GK+T K+A L++ ++ A D +R A++QL+
Sbjct: 92 VELNKSPKIPTVIMMTGLQGAGKTTFTGKLAKHLMKTENARPLLIAGDVYRPAAIDQLKV 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++L+VP+F+ G + +P + ++ + A +D VL+DTAGR+ +E LM L ++
Sbjct: 152 LGQQLEVPVFDMGTDANPVEIVRQGLALAKEKKNDYVLIDTAGRLHIDEALMDELKQIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L NP+ +L V +A+ G DAV+ FN++L I G+++TK D D + GAA
Sbjct: 212 LANPNEILLVVDAMTGQDAVNVADSFNEQLG----------ITGVVITKMDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+GAP+ FVG G+ TDL+
Sbjct: 261 LSIRAVTGAPIKFVGSGEKLTDLE 284
>gi|28210935|ref|NP_781879.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
gi|28203374|gb|AAO35816.1| signal recognition particle, subunit ffh/srp54 [Clostridium tetani
E88]
Length = 451
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 148/281 (52%), Gaps = 36/281 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV----------AAMEEA----LVRILTPRR 366
F+ + GK L + D++ A++ ++ L+ +V + E+ ++ LTP +
Sbjct: 14 FKKLRGKGKLSEKDIKEAMREVRLALLEADVNYKIVKDFVKSVSEKCNGKEVLESLTPGQ 73
Query: 367 SI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ D L ++ +KE KP V++ VG+ G GK+T K+A L + +
Sbjct: 74 QVVKIVNDELIELMGSKESEINFEANKPTVIMLVGLQGAGKTTMAGKLALQLRKKNKKPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL+ ++ VP+F G + +P ++K AI+ A N + +++DTAG
Sbjct: 134 LVACDIYRPAAIKQLQVVGSQIDVPVFTLGDKTNPVDISKAAIKHAKENNLNTIIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM L + P+ VL V +++ G DA++ FN+KL I
Sbjct: 194 RLHIDENLMDELKSIKENIEPNEVLLVVDSMTGQDAINVAESFNEKLN----------IS 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
G++LTK D D + GAALS+ ++G P+ F+G G+ DL+
Sbjct: 244 GVILTKLDG-DTRGGAALSIKAMTGKPIKFIGIGEKMNDLE 283
>gi|337281992|ref|YP_004621463.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
gi|335369585|gb|AEH55535.1| signal recognition particle protein [Streptococcus parasanguinis
ATCC 15912]
Length = 523
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 152/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + +AD++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRKKGKISEADVQEATKEIRLALLEADVALPVVKDFIKRVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 ETLNPAQQIVKIVDEELTAILGSETAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 -QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ K +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEEKARPLMIAADIYRPAAIDQLKTLGQQINVPVFSLGTEVPAVEIVRQGLEQARANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L P+ +L V +A++G +A + +FN++L
Sbjct: 187 YVLIDTAGRLQIDEKLMGELRDVKALVEPNEILLVVDAMIGQEAANVAREFNEQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|406935998|gb|EKD69823.1| hypothetical protein ACD_46C00722G0006 [uncultured bacterium]
Length = 339
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 163/344 (47%), Gaps = 62/344 (18%)
Query: 288 EEVFSSDSESEEDEEVGKHNKPDAKKTGWFSSMFQSIA---------------GKANLDK 332
EE SS + D ++P TG+F+ + Q +A GK LD
Sbjct: 12 EETESSIKQHSVDTSNSSADQP----TGFFARLKQGLAKTRTTLTNGMANLFLGKKQLD- 66
Query: 333 ADLEPALKALKDRLMTKNVAA-MEEALVRILTPRRSIDILRDVHAA-------------- 377
ADL L ++ L+T +V + L++ LT + + L DV AA
Sbjct: 67 ADL---LNDIEMALLTADVGVETTQQLIQSLTQKLARKELNDVDAAFQCLKEDMKTILRP 123
Query: 378 -------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQL 430
++KP+V++ VG+NG GK+T + K+A+ L Q +S+M+AA DTFR+ A+EQL
Sbjct: 124 CQSPLTLSSEKKPFVILMVGINGSGKTTTIGKLAHLLKQENLSIMLAAGDTFRAAAIEQL 183
Query: 431 RTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL 490
+ R +P+ + D A V +A+ A DV++ DTAGR+ LM L K+
Sbjct: 184 QVWGTRNHIPVIAQQQGADTAAVIYDAMDAAKARSVDVLIADTAGRLHTQSNLMAELQKV 243
Query: 491 ------IYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDT 544
I + P VL V +A +G +A++Q+ +FN+ + + GI+LTK D
Sbjct: 244 KRVLGKIDASAPHEVLIVLDATLGQNALNQVKQFNETIG----------VTGIVLTKLDG 293
Query: 545 IDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
K G ++ + P+ F+G G+S DL+ N V L
Sbjct: 294 T-AKGGIIFAIAKQTKIPIRFIGIGESILDLRPFNADEFVDALF 336
>gi|188582090|ref|YP_001925535.1| signal recognition particle-docking protein FtsY [Methylobacterium
populi BJ001]
gi|179345588|gb|ACB81000.1| signal recognition particle-docking protein FtsY [Methylobacterium
populi BJ001]
Length = 493
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 124/228 (54%), Gaps = 17/228 (7%)
Query: 366 RSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSG 425
R+++ + A +KPYV++ VGVNG GK+T + K++ SVM+AA DTFR+
Sbjct: 271 RALEPVATPIAIDSAKKPYVILTVGVNGAGKTTTIGKLSLKFKAEGRSVMLAAGDTFRAA 330
Query: 426 AVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
A+EQLR R P+ + D A +A +A +EA NG+DV+L+DTAGR+Q+ LM
Sbjct: 331 AIEQLRVWGERTGTPVISRAQGSDAAGLAFDAFKEARENGTDVLLIDTAGRLQNKAGLMA 390
Query: 486 ALSKLIYL------NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILL 539
L K++ + P L V +A VG +A+ Q+ F+Q ++P + G+++
Sbjct: 391 ELEKIVRVIRKLDPEAPHATLLVLDATVGQNALSQVELFSQ------AAP----VSGLVM 440
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
TK D + G +++ G PV F+G G+ DL+ + + +
Sbjct: 441 TKLDGT-ARGGILVALAAKFGLPVHFIGVGEGVEDLEPFAARDFARAI 487
>gi|222100122|ref|YP_002534690.1| Signal recognition particle protein [Thermotoga neapolitana DSM
4359]
gi|221572512|gb|ACM23324.1| Signal recognition particle protein [Thermotoga neapolitana DSM
4359]
Length = 433
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 159/296 (53%), Gaps = 36/296 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S +F++++G+ + + +++ A++ +K L+ +V A+ E +++ L
Sbjct: 9 LSRVFKNLSGRGKITEKNVKDAVREVKLSLLEADVNYKVVKEFVDHVLQKALGEEVLKSL 68
Query: 363 TP-RRSIDILRD----VHAAKEQ-----RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
TP ++ I I+RD + K + +P ++ VG+ G GK+T AK+A L +
Sbjct: 69 TPDQQFIKIVRDELIKIMGEKNEPLRLIHRPAPIMMVGLQGSGKTTTCAKLAKLLKKEGR 128
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
+ ++ A D +R AV+QL ++ V + Y K P + KE IQEA R G DV++VD
Sbjct: 129 NPLLVAADLYRPAAVDQLVKLGNQIGVNVVH-DYNKSPVEIVKEGIQEAERTGKDVLIVD 187
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ +E +MR L ++ + NPD +L V +A++G DAV+ F+++L DL+
Sbjct: 188 TAGRLHIDEDMMRELEEIKAILNPDEILLVVDAMMGQDAVNTAKVFDERL-DLT------ 240
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G ++TK D D + G LS+ YV+G PV F+G + L+ + I +L
Sbjct: 241 ---GFVVTKMDG-DARGGVILSIKYVTGKPVKFIGTSEKLDGLEPFHPDRIANRIL 292
>gi|332880672|ref|ZP_08448345.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357045958|ref|ZP_09107588.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
gi|332681306|gb|EGJ54230.1| signal recognition particle protein [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355530964|gb|EHH00367.1| signal recognition particle protein [Paraprevotella clara YIT
11840]
Length = 450
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 12/192 (6%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
Q P V++ G+NG GK+T K+A L + + + ++AACD +R A+EQL+ ++
Sbjct: 96 QGHPSVILMAGLNGAGKTTLSGKLALMLKTKKRKNPLLAACDIYRPAAIEQLKVLGEQIG 155
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+P++ + KD +A+ A++EA G DVV+VDTAGR+ +E +M+ ++ + + NPD
Sbjct: 156 IPVYSEPDNKDAVQIAQNAVKEAKAKGYDVVIVDTAGRLAVDEQMMQEIAAIKHGINPDE 215
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV +A+ G DAV+ +FN +L DG++LTK D D + GAALS+ V
Sbjct: 216 TLFVVDAMTGQDAVNTAKEFNDRLD----------FDGVVLTKLDG-DTRGGAALSIRTV 264
Query: 559 SGAPVMFVGCGQ 570
P+ FVG G+
Sbjct: 265 VNKPIKFVGTGE 276
>gi|282898237|ref|ZP_06306228.1| Signal recognition particle protein [Raphidiopsis brookii D9]
gi|281196768|gb|EFA71673.1| Signal recognition particle protein [Raphidiopsis brookii D9]
Length = 480
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ Q K V++ G+ G GK+T AK+A L + S ++ A D +R A++QL T
Sbjct: 90 NVPLAQAQDKTTVILMAGLQGTGKTTATAKLALHLRKTNRSCLLVATDVYRPAAIDQLVT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + DP +A++ ++ A G + V+VDTAGR+Q ++ +M LS++
Sbjct: 150 LGKQVDVPVFEMGSDADPVEIARQGVERARNEGINTVIVDTAGRLQIDQDMMAELSRIKS 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
PD L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 TIEPDETLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKMDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SGAP+ F+G G+ L+
Sbjct: 259 LSVRQISGAPIKFIGVGEKVEALQ 282
>gi|375089327|ref|ZP_09735654.1| signal recognition particle-docking protein FtsY [Facklamia
languida CCUG 37842]
gi|374567103|gb|EHR38334.1| signal recognition particle-docking protein FtsY [Facklamia
languida CCUG 37842]
Length = 338
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 17/213 (7%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++FVGVNGVGK+T++ K+ Y L Q V+MAA DTFR+GAVEQL +RL +P+
Sbjct: 132 PTVILFVGVNGVGKTTSVGKIGYSLQQAGHKVLMAAGDTFRAGAVEQLNVWGQRLDIPVV 191
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL---IYLNNPD-- 497
+ DPA V +A+++A G D +LVDTAGR+ LM L+K+ I NP+
Sbjct: 192 TGRDQGDPASVVYDAVKKANAEGYDYLLVDTAGRLHSKANLMAELAKMKRIIERENPNGV 251
Query: 498 -LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
VL V +A G +A+ Q +FN+ I G++LTK D K G LS+
Sbjct: 252 QEVLLVLDATTGQNALIQAKQFNEATE----------ITGLVLTKLDGT-AKGGVVLSIR 300
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
+ PV ++G G+ +DL+ + + + +L++
Sbjct: 301 HELDIPVKYIGLGEQASDLQVFDAEHYMYSLIR 333
>gi|443321269|ref|ZP_21050328.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
gi|442789014|gb|ELR98688.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
Length = 481
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P V++ G+ G GK+T AK+A +L + K S +M A D +R A+ QL T
Sbjct: 90 NVPLAQATQSPTVILMAGLQGTGKTTATAKLALYLQKQKRSCLMVATDIYRPAAIAQLLT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ +P+FE G + +P +A++ + +A G D V++DTAGR+Q + +M LS++
Sbjct: 150 LGKQIDIPVFELGTQVNPVEIARQGVAKAKEMGVDTVIIDTAGRLQIDPEMMAELSQIKR 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P L V +A+ G +A + FN ++ I G +LTK D D + GAA
Sbjct: 210 ATQPHDTLLVVDAMTGQEAANLTRTFNDEIG----------ITGAILTKMDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALE 282
>gi|134299902|ref|YP_001113398.1| signal recognition particle protein [Desulfotomaculum reducens
MI-1]
gi|134052602|gb|ABO50573.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfotomaculum reducens MI-1]
Length = 446
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 147/285 (51%), Gaps = 37/285 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+S+ GK L + D+ A++ +K L+ +V A+ + ++ L
Sbjct: 9 LDEIFKSLKGKGRLTEDDVNHAMREVKMALLEADVNFKVVKEFVAQVKGRAVGQDVLESL 68
Query: 363 TP-RRSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+P ++ I I+RD + P +++ VG+ G GK+T K+A L +
Sbjct: 69 SPAQQVIKIVRDELTELLGGTQAKINLSPKPPTIIMLVGLQGAGKTTTAGKLAKLLSKQG 128
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+M A D +R A++QL+ +L +P+F G E +P +A+ A+++A G D+V++
Sbjct: 129 RRPLMVAGDIYRPAAIKQLQVLGDQLNIPVFSMGQE-NPVKIAQSAVEQANSTGRDLVII 187
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ NE LM L+ + P +L V +A+ G +AV+ FNQKL
Sbjct: 188 DTAGRLHINEELMDELANIKSTVRPHEILLVVDAMTGQEAVNVADTFNQKLG-------- 239
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+DGI++TK D D + GAALS+ V+G P+ F G G+ L+
Sbjct: 240 --LDGIVMTKLDG-DARGGAALSVRKVTGTPIKFAGMGEKLDALE 281
>gi|326487934|dbj|BAJ89806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495310|dbj|BAJ85751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 554
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T AK+A++L + S M+ A D +R A++QL ++ VP++
Sbjct: 170 PTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTVLGEQVGVPVY 229
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
+G PA + K A++EA RN D ++VDTAGR+Q ++ +M L ++ NP +L V
Sbjct: 230 SEGTTAKPAEITKNAMEEAKRNNIDAIVVDTAGRLQIDKTMMVELKEVKKSVNPTEILLV 289
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A ++ FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 290 VDAMTGQEAAALVTTFNIEIG----------ISGAILTKLDG-DSRGGAALSVKEVSGKP 338
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ DL+
Sbjct: 339 IKFVGRGERMEDLE 352
>gi|157150208|ref|YP_001450412.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
gi|157075002|gb|ABV09685.1| signal recognition particle protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 524
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKTNHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|238593005|ref|XP_002393074.1| hypothetical protein MPER_07266 [Moniliophthora perniciosa FA553]
gi|215460003|gb|EEB94004.1| hypothetical protein MPER_07266 [Moniliophthora perniciosa FA553]
Length = 324
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 147/285 (51%), Gaps = 59/285 (20%)
Query: 236 SNPDPKKK-ITKKNRVW-DDSPPES---KLDFTDPAGGNGSNIE-------VEAADHGES 283
S PKKK TK R W D++P ES LDF+ G S++ V+ A G
Sbjct: 52 SEATPKKKNKTKAQRKWGDEAPSESDMASLDFSMDRPGAISDMSSHDLQALVDQASLGTR 111
Query: 284 MMD-----KEEVFSSDSESEEDE------------EVGKHNKPDAKKTGWFSSMFQSIAG 326
D K+ F+ D+ S+ DE E G +K + G S+F + G
Sbjct: 112 TRDGLYEVKDWEFAKDA-SDTDETDNAILRTLKSNESGSASKSGS--LGALGSLFARLTG 168
Query: 327 KANLDKADLEPALKALKDRLMTKNVAA-----MEEALVRILTPRRSIDILRDVHAAKEQR 381
L + DL+P L+ +K LM KNVA + E + + L ++ + R
Sbjct: 169 SKVLTEQDLKPVLEGMKQHLMKKNVAKEIADKVCEGVGKSLVGKK---------VEESTR 219
Query: 382 KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---- 437
PY + FVGVNGVGKSTNL+KV +WL+Q+ + V++AACDTFRSGAVEQLR H R L
Sbjct: 220 VPYSITFVGVNGVGKSTNLSKVCFWLIQNGLRVLIAACDTFRSGAVEQLRVHVRNLSMLG 279
Query: 438 ---------QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
+V +FE+GY KD A +A+EAI A N DVVL+DT
Sbjct: 280 VNGATDSKGRVELFERGYGKDAAAIAREAIAYAGSNDFDVVLIDT 324
>gi|20807909|ref|NP_623080.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
gi|20516476|gb|AAM24684.1| Signal recognition particle GTPase [Thermoanaerobacter
tengcongensis MB4]
Length = 447
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 150/287 (52%), Gaps = 40/287 (13%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
+F+ + GK L + D++ A++ +K L+ +V A+ + ++ L
Sbjct: 11 LQGVFKKLRGKGKLTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESL 70
Query: 363 TPRRSIDILRDVH-------AAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQ 409
TP + + ++ VH + E R P V++ VG+ G GK+T K+A L +
Sbjct: 71 TPAQQV--IKIVHEELIKLMGSVESRLNLGSKVPAVIMMVGLQGSGKTTACGKLANLLKK 128
Query: 410 HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVV 469
+ ++ ACDT R A++QL+ + VP+F G + D A +AK +I A + DVV
Sbjct: 129 QGKNPLLVACDTVRPAAIKQLQVLGANINVPVFTMGDKVDTADIAKASIDYAKSHNVDVV 188
Query: 470 LVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSP 529
++DTAGR+ ++ LM L ++ +PD +L V +A+ G DAV+ S FN++L
Sbjct: 189 IIDTAGRLHIDDELMEELVRIKEAVHPDEILLVADAMTGQDAVNVASSFNERLD------ 242
Query: 530 NPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
I G++LTK D D + GAALS+ V+ P+ +VG G+ D++
Sbjct: 243 ----ITGVILTKLDG-DTRGGAALSIKAVTQKPIKYVGIGEKLGDIE 284
>gi|320546729|ref|ZP_08041040.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
gi|320448608|gb|EFW89340.1| signal recognition particle protein [Streptococcus equinus ATCC
9812]
Length = 521
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 151/292 (51%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F++I GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVGHEII 66
Query: 360 RILTPRRSI---------DILRDVHAAKEQ--RKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I +IL A E+ + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLI 126
Query: 409 -QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ K MM A D +R A++QL+T ++ VP+F+ G + + + +A N +D
Sbjct: 127 KEEKARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTHGLAQAKENHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
V++DTAGR+Q +E LM+ L + L P+ +L V ++++G +A + +FN++L
Sbjct: 187 YVIIDTAGRLQIDEALMQELRDVKALAKPNEILLVVDSMIGQEAANVADEFNKQLD---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
I GI+LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------ITGIVLTKIDG-DTRGGAALSIREITGKPIKFTGTGEKITDIETFH 287
>gi|307244407|ref|ZP_07526518.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492226|gb|EFM64268.1| signal recognition particle protein [Peptostreptococcus stomatis
DSM 17678]
Length = 452
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 148/281 (52%), Gaps = 36/281 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
F + K L +AD++ A++ +K L+ +V + E +++ LTP +
Sbjct: 14 FGKLRSKGKLTEADVKTAMREVKMALLEADVNFKVVKDFVKVVQERCVGEEVLKSLTPGQ 73
Query: 367 SI---------DILRDVHA--AKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ ++ DV + + P V++ VG+ G GK+T K+ +L + S +
Sbjct: 74 MVVKIVNEELTALMGDVQSKLTYSPQPPTVIMMVGLQGAGKTTTSGKLGGYLKKDGKSPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ ACD +R A++QL+ +L +P+F G + P +AK+A++ A + +DVV++DTAG
Sbjct: 134 LVACDVYRPAAIKQLQVVGEKLDLPVFAMGDQVSPVEIAKKALEHAKSHSNDVVIIDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM+ L + NP +L V +++ G DAV+ FN+ L ID
Sbjct: 194 RLHVDEVLMQELKDIKTQVNPQEILLVVDSMTGQDAVNVSESFNEILG----------ID 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
G++LTK D D + GAALS+ V+ P+ F+G G+ +L+
Sbjct: 244 GVVLTKLDG-DTRGGAALSIRAVTQKPIKFIGMGEKLDNLE 283
>gi|154249332|ref|YP_001410157.1| signal recognition particle protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153268|gb|ABS60500.1| signal recognition particle protein [Fervidobacterium nodosum
Rt17-B1]
Length = 434
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 155/295 (52%), Gaps = 35/295 (11%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S+ F+ ++GK + + ++E A++ +K L+ +V A+ E +++ L
Sbjct: 9 LSNAFKVLSGKGKITERNIEEAIQIVKTALLAADVNYKVVKEFVENVKKRALGEEVLKSL 68
Query: 363 TP-RRSIDILRD--------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVS 413
TP + + I+RD K +P ++ VG+ G GK+T+ AK+A +L + +
Sbjct: 69 TPDQMFVKIIRDELIKLLGEREPFKLIHRPAYIMMVGLQGTGKTTSAAKIANYLKKQGKN 128
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
++ A DT+R A++QL T +++ VP+ G K+ + +EA ++ +G DVV++DT
Sbjct: 129 PILVAADTYRPAAIDQLETLGKKIGVPVI-TGDRKNALKIVEEAKKQVKDSGHDVVILDT 187
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
AGR+ ++ +M+ L ++ + NPD +L +A+ G DAV+ FN +L
Sbjct: 188 AGRLHIDDEMMQELEQIKEMVNPDEILLTVDAMAGQDAVNSGKTFNDRLN---------- 237
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G ++TK D D + G L++ Y++G PV FVG G+ D + I +L
Sbjct: 238 VTGFVITKLDG-DSRGGVILTIRYITGKPVKFVGVGEKIDDFDEFYPDRIASRIL 291
>gi|401682905|ref|ZP_10814794.1| signal recognition particle protein [Streptococcus sp. AS14]
gi|422851624|ref|ZP_16898294.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|325694512|gb|EGD36421.1| signal recognition particle protein [Streptococcus sanguinis SK150]
gi|400183587|gb|EJO17838.1| signal recognition particle protein [Streptococcus sp. AS14]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|153940237|ref|YP_001391747.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|170754416|ref|YP_001781992.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|384462755|ref|YP_005675350.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|429243872|ref|ZP_19207356.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
gi|152936133|gb|ABS41631.1| signal recognition particle protein [Clostridium botulinum F str.
Langeland]
gi|169119628|gb|ACA43464.1| signal recognition particle protein [Clostridium botulinum B1 str.
Okra]
gi|295319772|gb|ADG00150.1| signal recognition particle protein [Clostridium botulinum F str.
230613]
gi|428759078|gb|EKX81467.1| signal recognition particle protein [Clostridium botulinum
CFSAN001628]
Length = 449
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 11/192 (5%)
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++ VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 103 VIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTM 162
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
G + +P ++K AI+ A N ++VV++DTAGR+ +E LM L + NP +L V +
Sbjct: 163 GDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVD 222
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
A+ G DAV+ + FN KL I G++LTK D D + GAALS+ ++G P+
Sbjct: 223 AMTGQDAVNVANNFNDKLD----------ISGVILTKLDG-DTRGGAALSIKSMTGKPIK 271
Query: 565 FVGCGQSYTDLK 576
FVG G+ DL+
Sbjct: 272 FVGLGEKMNDLE 283
>gi|148380407|ref|YP_001254948.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933476|ref|YP_001384624.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935337|ref|YP_001388141.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|168180670|ref|ZP_02615334.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|168184655|ref|ZP_02619319.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226949802|ref|YP_002804893.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|237795885|ref|YP_002863437.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|421837788|ref|ZP_16271860.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
gi|148289891|emb|CAL83999.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 3502]
gi|152929520|gb|ABS35020.1| signal recognition particle protein [Clostridium botulinum A str.
ATCC 19397]
gi|152931251|gb|ABS36750.1| signal recognition particle protein [Clostridium botulinum A str.
Hall]
gi|182668381|gb|EDT80360.1| signal recognition particle protein [Clostridium botulinum NCTC
2916]
gi|182672287|gb|EDT84248.1| signal recognition particle protein [Clostridium botulinum Bf]
gi|226841461|gb|ACO84127.1| signal recognition particle protein [Clostridium botulinum A2 str.
Kyoto]
gi|229263878|gb|ACQ54911.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
657]
gi|409739977|gb|EKN40451.1| signal recognition particle protein [Clostridium botulinum
CFSAN001627]
Length = 449
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 11/192 (5%)
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++ VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 103 VIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTM 162
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
G + +P ++K AI+ A N ++VV++DTAGR+ +E LM L + NP +L V +
Sbjct: 163 GDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVD 222
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
A+ G DAV+ + FN KL I G++LTK D D + GAALS+ ++G P+
Sbjct: 223 AMTGQDAVNVANNFNDKLD----------ISGVILTKLDG-DTRGGAALSIKSMTGKPIK 271
Query: 565 FVGCGQSYTDLK 576
FVG G+ DL+
Sbjct: 272 FVGLGEKMNDLE 283
>gi|125717990|ref|YP_001035123.1| SRP54, signal recognition particle GTPase protein [Streptococcus
sanguinis SK36]
gi|125497907|gb|ABN44573.1| SRP54, signal recognition particle GTPase protein, putative
[Streptococcus sanguinis SK36]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|315648170|ref|ZP_07901271.1| signal recognition particle protein [Paenibacillus vortex V453]
gi|315276816|gb|EFU40159.1| signal recognition particle protein [Paenibacillus vortex V453]
Length = 460
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K + P V++ G+ G GK+T K+A L + ++ A D +R A++QL ++
Sbjct: 96 KSNKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNSRPLLVAGDIYRPAAIKQLEVLGEQI 155
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
VP+F G + P +AK+ +Q A NG D V++DTAGR+ +E LM L ++ + NPD
Sbjct: 156 NVPVFSLGDKTSPVEIAKQGLQHAKDNGHDYVIIDTAGRLHVDEELMEELKQIHSVVNPD 215
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
VL V +A+ G DAV+ FNQ+L + G++LTK D D + GAALS+
Sbjct: 216 EVLLVVDAMTGQDAVNVAESFNQQLT----------LTGVVLTKLDG-DTRGGAALSVKA 264
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
V+G P+ F G+ L+ + + + +L
Sbjct: 265 VTGCPIKFAALGEKIDALEPFHPERMASRIL 295
>gi|238899311|ref|YP_002924994.1| cell division protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229467072|gb|ACQ68846.1| cell division protein: membrane binding (N-terminal); GTPase domain
(C-terminal) [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 375
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 17/214 (7%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ PYV++ VGVNGVGK+T + K+A+ L Q +SV++AA DTFR+ A EQL+ R Q+P
Sbjct: 166 KSPYVILMVGVNGVGKTTTIGKLAHQLRQQGLSVLLAAGDTFRAAATEQLKIWGERNQIP 225
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN----- 495
+ + D A V +A+Q A G DVVL DTAGR+Q+ LM L K++ +
Sbjct: 226 VVAQHDGADSASVIFDAVQSAKARGIDVVLADTAGRLQNKTHLMEELKKIVRVMKKWGEE 285
Query: 496 -PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
P V+ V +A G +A++Q F++ + + G++LTK D K G +
Sbjct: 286 FPHEVMLVLDASTGQNAINQTKLFHETVP----------LTGLVLTKLDG-SAKGGIIFA 334
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G P+ ++G G+ DL+ N ++ L
Sbjct: 335 IADQFGIPIRYIGVGEKIEDLRPFNAGDFIEALF 368
>gi|422860148|ref|ZP_16906792.1| signal recognition particle protein [Streptococcus sanguinis SK330]
gi|327470046|gb|EGF15510.1| signal recognition particle protein [Streptococcus sanguinis SK330]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKSLANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|227530556|ref|ZP_03960605.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
gi|227349562|gb|EEJ39853.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus vaginalis
ATCC 49540]
Length = 484
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L + K + A D +R A+ QL+ A ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNEDKARPLFIAADVYRPAAITQLKQVADQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FEKG + DP + ++ ++ A +N +D V++DTAGR+Q +E LM L+ + L NPD +L
Sbjct: 161 FEKGTDVDPVEIVRQGMEVAKQNHNDYVIIDTAGRLQIDEQLMDELANIKQLVNPDEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +++ G +AV+ F+ KL I G++LTK D D + GAA+S+ V+G
Sbjct: 221 VIDSMTGQNAVNTAQGFDDKLD----------ITGVVLTKLDG-DTRGGAAMSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGEGEKMEDL 283
>gi|66362756|ref|XP_628344.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
gi|46229785|gb|EAK90603.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
Length = 515
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 128/237 (54%), Gaps = 18/237 (7%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
+A+ E LV ILTP R+ + ++ K V+VFVG+ G GK+T K A + +
Sbjct: 92 SAVVEELVNILTPSRTPYV-------PQRDKSNVIVFVGLQGSGKTTTCTKFANYYQRRG 144
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
+ DTFR+GA +QL+ +A ++++P + E DP +A++ ++E + G D+++V
Sbjct: 145 WKTALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVKIARDGVREFRKEGYDLIIV 204
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DT+GR + L + +++ NPD V+FV ++ +G DQ F + D+ S
Sbjct: 205 DTSGRHKQESSLFVEMEQVVMETNPDDVVFVMDSHIGQACYDQAMAFCNAV-DVGS---- 259
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+++TK D K G ALS V +GAP++F+G G+ + + + K V LL
Sbjct: 260 -----VIITKLDG-HAKGGGALSAVAATGAPIIFIGTGEHFDEFEPFETKGFVSRLL 310
>gi|330996193|ref|ZP_08320083.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
gi|329573697|gb|EGG55288.1| signal recognition particle protein [Paraprevotella xylaniphila YIT
11841]
Length = 451
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 114/192 (59%), Gaps = 12/192 (6%)
Query: 380 QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV-SVMMAACDTFRSGAVEQLRTHARRLQ 438
Q P V++ G+NG GK+T K+A L K + ++AACD +R A+EQL+ ++
Sbjct: 96 QGHPSVILMAGLNGAGKTTLSGKLALMLKSKKRKNPLLAACDIYRPAAIEQLKVLGEQIG 155
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDL 498
+P++ + KD +A+ A++EA G DVV+VDTAGR+ +E +M+ ++ + + NPD
Sbjct: 156 IPVYSEPDNKDAVQIAQNAVKEAKAKGYDVVIVDTAGRLAVDEQMMQEIAAIKHGINPDE 215
Query: 499 VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYV 558
LFV +A+ G DAV+ +FN +L DG++LTK D D + GAALS+ V
Sbjct: 216 TLFVVDAMTGQDAVNTAKEFNDRLD----------FDGVVLTKLDG-DTRGGAALSIRTV 264
Query: 559 SGAPVMFVGCGQ 570
P+ FVG G+
Sbjct: 265 VNKPIKFVGTGE 276
>gi|387818670|ref|YP_005679017.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
gi|322806714|emb|CBZ04283.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
[Clostridium botulinum H04402 065]
Length = 449
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 11/192 (5%)
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++ VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 103 VIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTM 162
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
G + +P ++K AI+ A N ++VV++DTAGR+ +E LM L + NP +L V +
Sbjct: 163 GDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVD 222
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
A+ G DAV+ + FN KL I G++LTK D D + GAALS+ ++G P+
Sbjct: 223 AMTGQDAVNVANNFNDKLD----------ISGVILTKLDG-DTRGGAALSIKSMTGKPIK 271
Query: 565 FVGCGQSYTDLK 576
FVG G+ DL+
Sbjct: 272 FVGLGEKMNDLE 283
>gi|422346384|ref|ZP_16427298.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
gi|373225929|gb|EHP48256.1| signal recognition particle protein [Clostridium perfringens
WAL-14572]
Length = 452
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V + VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 101 PTVFMLVGLQGAGKTTMAGKLALHLRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVF 160
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
G + +AK AI+ A NG++VV++DTAGR+ +E LM+ L + ++NP +L V
Sbjct: 161 SMGDKVKAVDIAKAAIEHAKDNGNNVVIIDTAGRLHIDEDLMQELKDVKEVSNPSEILLV 220
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G DAV+ FN L DLS GI+LTK D D + GAALS+ ++ P
Sbjct: 221 VDAMTGQDAVNVAETFNNSL-DLS---------GIILTKLDG-DTRGGAALSIRDITSKP 269
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ +D++
Sbjct: 270 IKFVGVGEKMSDIE 283
>gi|422858480|ref|ZP_16905130.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
gi|327460366|gb|EGF06703.1| signal recognition particle protein [Streptococcus sanguinis
SK1057]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + + D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISENDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + ++M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARLLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEIPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|323340725|ref|ZP_08080977.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|323091848|gb|EFZ34468.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 493
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 12/203 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRT 432
V K ++ P V++ VG+ G GK+T K+AY L + + +M A D +R AV+QL+T
Sbjct: 104 VSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKT 163
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+ + VP+FE G + DP + ++ ++ A +D V++DTAGR+Q +E LM L+++
Sbjct: 164 VGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKE 223
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L +PD +L +++ G +AV+ FN L + G++LTK D D + GAA
Sbjct: 224 LTHPDEILLTVDSMTGQNAVEVAQGFNDTLD----------VTGVVLTKLDG-DTRGGAA 272
Query: 553 LSMVYVSGAPVMFVGCGQSYTDL 575
LS+ V+G P+ F+G G+ T L
Sbjct: 273 LSIRAVTGKPIKFIGQGEKMTAL 295
>gi|450175644|ref|ZP_21885302.1| signal recognition particle protein [Streptococcus mutans SM1]
gi|449246445|gb|EMC44749.1| signal recognition particle protein [Streptococcus mutans SM1]
Length = 516
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--AMEEALVRIL--------- 362
T +F+++ GK L + D++ K ++ L+ +VA ++E + R+
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 363 ----TPRRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
+ ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDSSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|434398063|ref|YP_007132067.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
gi|428269160|gb|AFZ35101.1| signal recognition particle subunit FFH/SRP54 (srp54) [Stanieria
cyanosphaera PCC 7437]
Length = 485
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ + P +++ G+ G GK+T AK+A +L + + + +M A D +R A+ QL T
Sbjct: 90 NVPLAQADKAPTIILMAGLQGTGKTTATAKLALYLQKQQQTCLMVATDVYRPAAINQLLT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + +P +A++ I++A G D VL+DTAGR+Q ++ +M L+++
Sbjct: 150 LGKQINVPVFEMGTDANPVEIARQGIEKAKELGVDTVLIDTAGRLQIDQDMMAELAQIKE 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 TVQPHDTLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKLDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ VSG P+ FVG G+ L+
Sbjct: 259 LSVRQVSGQPIKFVGVGEKVEALE 282
>gi|294622904|ref|ZP_06701817.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|425030604|ref|ZP_18435770.1| signal recognition particle protein [Enterococcus faecium 515]
gi|431301266|ref|ZP_19507585.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|431775548|ref|ZP_19563820.1| signal recognition particle protein [Enterococcus faecium E2560]
gi|291597676|gb|EFF28829.1| signal recognition particle protein [Enterococcus faecium U0317]
gi|403017277|gb|EJY30044.1| signal recognition particle protein [Enterococcus faecium 515]
gi|430580456|gb|ELB18923.1| signal recognition particle protein [Enterococcus faecium E1626]
gi|430642817|gb|ELB78583.1| signal recognition particle protein [Enterococcus faecium E2560]
Length = 472
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T K+A +L +++ ++ A D +R A++QL+ ++
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L VP+F+ G E P + ++ ++ A +D VL+DTAGR+ +E LM L ++ L P
Sbjct: 156 LDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKELTQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ +L V +A+ G DAV+ FNQ+L I G+++TK D D + GAALS+
Sbjct: 216 NEILLVVDAMTGQDAVNVADSFNQQLG----------ITGVVITKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+GAP+ F+G G+ TDL+
Sbjct: 265 SVTGAPIKFIGSGEKLTDLE 284
>gi|347525650|ref|YP_004832398.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
gi|345284609|gb|AEN78462.1| signal recognition particle protein [Lactobacillus ruminis ATCC
27782]
Length = 493
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 12/203 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRT 432
V K ++ P V++ VG+ G GK+T K+AY L + + +M A D +R AV+QL+T
Sbjct: 104 VSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKT 163
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+ + VP+FE G + DP + ++ ++ A +D V++DTAGR+Q +E LM L+++
Sbjct: 164 VGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKE 223
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L +PD +L +++ G +AV+ FN L + G++LTK D D + GAA
Sbjct: 224 LTHPDEILLTVDSMTGQNAVEVAQGFNDTLD----------VTGVVLTKLDG-DTRGGAA 272
Query: 553 LSMVYVSGAPVMFVGCGQSYTDL 575
LS+ V+G P+ F+G G+ T L
Sbjct: 273 LSIRAVTGKPIKFIGQGEKMTAL 295
>gi|326692469|ref|ZP_08229474.1| signal recognition particle protein [Leuconostoc argentinum KCTC
3773]
Length = 491
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRTHARR 436
K Q+ P +++ G+ G GK+T +AK+AY L + K ++ A D +R A++QL R
Sbjct: 96 KSQKIPTIIMMAGLQGAGKTTTVAKLAYKLKTEEKARPLLIAADVYRPAAIDQLEILGRD 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L +P+F+ G + DP + ++ + +A N +D V +DTAGR+Q +E LM+ L + + P
Sbjct: 156 LDIPVFQLGTDVDPREIVRQGLAKAAENKNDYVFIDTAGRLQIDEVLMQELKDVAEIAQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D +L +A+ G +A + F + L DL+ G++LTK D D + GAALS+
Sbjct: 216 DEILLTVDAMTGQNAAETAKGFAEAL-DLT---------GVVLTKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDL 575
V+G P+ FVG G+ TDL
Sbjct: 265 DVTGKPIKFVGQGEKPTDL 283
>gi|422848695|ref|ZP_16895371.1| signal recognition particle protein [Streptococcus sanguinis SK115]
gi|325689716|gb|EGD31720.1| signal recognition particle protein [Streptococcus sanguinis SK115]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|323351581|ref|ZP_08087235.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
gi|322122067|gb|EFX93793.1| signal recognition particle protein [Streptococcus sanguinis VMC66]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|319938302|ref|ZP_08012699.1| signal recognition particle GTPase [Coprobacillus sp. 29_1]
gi|319806595|gb|EFW03253.1| signal recognition particle GTPase [Coprobacillus sp. 29_1]
Length = 457
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 12/191 (6%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQV 439
RKP V++ VG+ G GK+T K+A + + + ++ A D +R AV+QL+T ++L V
Sbjct: 98 RKPTVIMMVGLQGSGKTTTSGKIAKLITKKYAKKPLLVAADIYRPAAVDQLKTLGQQLNV 157
Query: 440 PIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV 499
P+FEKG + + K+A+ N DV++VDTAGR+ +EPLM+ L + + NP +
Sbjct: 158 PVFEKGTDISAEDIVKQAMAYGQENQHDVIIVDTAGRLHIDEPLMQELQNIKEITNPSEI 217
Query: 500 LFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVS 559
L V +AL G D V+ FN+ L+ I G +LTK D D + G ALS+ +++
Sbjct: 218 LLVVDALTGQDIVNVAQSFNEHLS----------ITGAVLTKLDG-DSRGGGALSVRHIT 266
Query: 560 GAPVMFVGCGQ 570
P+ FVG G+
Sbjct: 267 HVPIKFVGTGE 277
>gi|422870940|ref|ZP_16917433.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
gi|328946321|gb|EGG40465.1| signal recognition particle protein [Streptococcus sanguinis
SK1087]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|282899599|ref|ZP_06307563.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195478|gb|EFA70411.1| Signal recognition particle protein [Cylindrospermopsis raciborskii
CS-505]
Length = 480
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ Q + VV+ G+ G GK+T AK+A L + S ++ A D +R A++QL T
Sbjct: 90 NVPLAEAQNQTTVVLMAGLQGTGKTTATAKLALHLRKTNRSCLLVATDIYRPAAIDQLVT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++ VP+FE G + DP +A++ ++ A G + V+VDTAGR+Q ++ +M LS++
Sbjct: 150 LGKQIDVPVFEMGSDADPVEIARQGVERARNEGINTVIVDTAGRLQIDQDMMAELSRIKS 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
PD L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 TIEPDETLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKMDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SGAP+ F+G G+ L+
Sbjct: 259 LSVRQISGAPIKFIGVGEKVEALQ 282
>gi|434392620|ref|YP_007127567.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
gi|428264461|gb|AFZ30407.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 7428]
Length = 484
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V A+ ++ P +V+ G+ G GK+T AK+A L + + S MM A D +R A++QL T
Sbjct: 90 NVPLAQAEQPPTIVLMAGLQGTGKTTATAKLALHLRKLERSCMMVATDVYRPAAIDQLVT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
++++VP+FE G + +P +A++ ++ A G D V++DTAGR+Q ++ +M L+++
Sbjct: 150 LGKQIEVPVFEMGSDANPVEIARQGVERAKAEGVDTVIIDTAGRLQIDQDMMAELAQIKE 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P VL V +A+ G +A + F+ ++ I G +LTK D D + GAA
Sbjct: 210 TVQPHEVLLVVDAMTGQEAANLTRTFHDEIG----------ITGAILTKLDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ +SG P+ FVG G+ L+
Sbjct: 259 LSVRQISGQPIKFVGVGEKVEALQ 282
>gi|450124877|ref|ZP_21867296.1| signal recognition particle protein [Streptococcus mutans U2A]
gi|449233422|gb|EMC32498.1| signal recognition particle protein [Streptococcus mutans U2A]
Length = 516
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--AMEEALVRIL--------- 362
T +F+++ GK L + D++ K ++ L+ +VA ++E + R+
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 363 ----TPRRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
+ ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDSSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F+ G E + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|443312631|ref|ZP_21042247.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
gi|442777350|gb|ELR87627.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synechocystis sp. PCC 7509]
Length = 482
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 116/204 (56%), Gaps = 11/204 (5%)
Query: 373 DVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRT 432
+V AK + P +V+ G+ G GK+T AK+A L + S ++ A D +R A++QL T
Sbjct: 90 NVPLAKADQAPTIVLMAGLQGTGKTTATAKLALHLKKINRSCLLVATDIYRPAAIDQLVT 149
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+++QVP+FE G + DP +AK +++A G D V++DTAGR+Q + +M L+++
Sbjct: 150 LGKQIQVPVFEMGSDADPVEIAKRGVEQAKEQGVDTVIIDTAGRLQIDVDMMGELARIKA 209
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P L V +A+ G +A + F++++ I G +LTK D D + GAA
Sbjct: 210 AVQPQETLLVVDAMTGQEAANLTRTFHEQIG----------ITGAILTKLDG-DSRGGAA 258
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ VSG P+ FVG G+ L+
Sbjct: 259 LSVRQVSGQPIKFVGVGEKVEALQ 282
>gi|104774249|ref|YP_619229.1| Signal recognition particle protein Ffh [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514339|ref|YP_813245.1| Signal recognition particle GTPase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|418028857|ref|ZP_12667406.1| hypothetical protein LDBUL1632_00200 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|103423330|emb|CAI98173.1| Signal recognition particle protein Ffh [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093654|gb|ABJ58807.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|354691194|gb|EHE91132.1| hypothetical protein LDBUL1632_00200 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 476
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 339 LKALKDRLMTKNVAAMEEALVRILTP-RRSIDILRD----------VHAAKEQRKPYVVV 387
K +KD + T A+ + + LTP ++ I I+ + V K P V++
Sbjct: 46 FKVVKDFIKTIKKRALGQEVQESLTPGQQVIKIVNEELTKMMGEEAVGLTKSPHIPTVIM 105
Query: 388 FVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 446
VG+ G GK+T + K+AY L+ + K + A D +R A++QL+ L+VP++
Sbjct: 106 MVGLQGTGKTTTVGKLAYRLMKEEKARPFLIAGDIYRPAAIDQLKQIGADLKVPVYSDPE 165
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
EK A + ++ + EA + +D V++DTAGR++ +EPLM+ L ++ ++ PD +L V +A+
Sbjct: 166 EKSVAKIVEDGLAEAAVHRNDYVIIDTAGRLEIDEPLMKELEEVKAVSQPDNILLVVDAM 225
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
G A D FN++L + G++LTK D D + GAALS+ ++G P++F
Sbjct: 226 TGQVAADVAKTFNERLD----------VTGVILTKLDG-DTRGGAALSIRAITGKPILFT 274
Query: 567 GCGQSYTDLK 576
G G+ TDL+
Sbjct: 275 GQGEKLTDLE 284
>gi|189425506|ref|YP_001952683.1| signal recognition particle protein [Geobacter lovleyi SZ]
gi|189421765|gb|ACD96163.1| signal recognition particle protein [Geobacter lovleyi SZ]
Length = 463
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P V++ VG+ G GK+T K+ WL + K ++ D +R A+EQL+T R+L +
Sbjct: 99 KPPVVLMLVGLQGAGKTTTCGKLGSWLRKQKRRPLLVPADVYRPAAIEQLKTVGRQLNID 158
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F+ ++P + A++ A NG D VL+DTAGR Q ++ LM L ++ P +L
Sbjct: 159 VFDSQTGQEPVDICSAAVRFAELNGFDTVLLDTAGRHQIDDFLMNELERIKAAAQPREIL 218
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A+ G +AV FN +L I G++L+K D D K GAALS+ V+G
Sbjct: 219 FVADAMTGQEAVTVAGGFNDRLG----------ITGVILSKLDG-DAKGGAALSIKAVTG 267
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
APV FVG G+ L+ + +V +L
Sbjct: 268 APVKFVGLGEKLDALEVFHPDRLVSRIL 295
>gi|431771034|ref|ZP_19559423.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|431772480|ref|ZP_19560819.1| signal recognition particle protein [Enterococcus faecium E2369]
gi|430634058|gb|ELB70199.1| signal recognition particle protein [Enterococcus faecium E1644]
gi|430637931|gb|ELB73923.1| signal recognition particle protein [Enterococcus faecium E2369]
Length = 472
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T K+A +L +++ ++ A D +R A++QL+ ++
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L VP+F+ G E P + ++ ++ A +D VL+DTAGR+ +E LM L ++ L P
Sbjct: 156 LDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKELTQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ +L V +A+ G DAV+ FNQ+L I G+++TK D D + GAALS+
Sbjct: 216 NEILLVVDAMTGQDAVNVADSFNQQLG----------ITGVVITKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+GAP+ F+G G+ TDL+
Sbjct: 265 SVTGAPIKFIGSGEKLTDLE 284
>gi|406039491|ref|ZP_11046846.1| signal recognition particle-docking protein FtsY [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 377
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 128/243 (52%), Gaps = 23/243 (9%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKV 412
A++E LV +L PR ++ +H + PYV++ VGVNGVGK+T + K+A L
Sbjct: 149 ALQEELVALLAPR-----VKPLHI-DPNKTPYVILMVGVNGVGKTTTIGKLAKRLQGEGK 202
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
VM+AA DTFR+ A EQL+ R +P+ +G+ D A V +A + A G DV++ D
Sbjct: 203 KVMLAAGDTFRAAATEQLQIWGERNNIPVVAQGHGADSASVIFDAFESARAKGIDVLIAD 262
Query: 473 TAGRMQDNEPLMRALSKL------IYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
TAGR+ + LM L K+ I P ++ V +A G +A++Q+ +F+Q +
Sbjct: 263 TAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVG--- 319
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
+ GI +TK D K G ++ + P+ F+G G+ DL+ + KS V
Sbjct: 320 -------LTGITITKLDGT-AKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAA 371
Query: 587 LLK 589
L +
Sbjct: 372 LFE 374
>gi|69248474|ref|ZP_00604748.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257878620|ref|ZP_05658273.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257883120|ref|ZP_05662773.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257891867|ref|ZP_05671520.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257894437|ref|ZP_05674090.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260559333|ref|ZP_05831515.1| signal recognition particle protein [Enterococcus faecium C68]
gi|261208009|ref|ZP_05922687.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289566895|ref|ZP_06447302.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|293556478|ref|ZP_06675052.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|293563841|ref|ZP_06678274.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|293567270|ref|ZP_06678624.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|294615586|ref|ZP_06695442.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|294619810|ref|ZP_06699200.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|314938080|ref|ZP_07845388.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|314943602|ref|ZP_07850359.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|314949239|ref|ZP_07852588.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|314952611|ref|ZP_07855603.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|314992459|ref|ZP_07857881.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|314997379|ref|ZP_07862334.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|383329196|ref|YP_005355080.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|389869023|ref|YP_006376446.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|406581072|ref|ZP_11056251.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|406583326|ref|ZP_11058408.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|406585675|ref|ZP_11060654.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|406591244|ref|ZP_11065537.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410936498|ref|ZP_11368363.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|415894168|ref|ZP_11550289.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|416142609|ref|ZP_11599613.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|424780120|ref|ZP_18207001.1| signal recognition particle protein [Enterococcus faecium V689]
gi|424802491|ref|ZP_18228004.1| signal recognition particle protein [Enterococcus faecium S447]
gi|424850064|ref|ZP_18274479.1| signal recognition particle protein [Enterococcus faecium R501]
gi|424857588|ref|ZP_18281718.1| signal recognition particle protein [Enterococcus faecium R499]
gi|424907911|ref|ZP_18331345.1| signal recognition particle protein [Enterococcus faecium R497]
gi|424951324|ref|ZP_18366439.1| signal recognition particle protein [Enterococcus faecium R496]
gi|424953399|ref|ZP_18368365.1| signal recognition particle protein [Enterococcus faecium R494]
gi|424958870|ref|ZP_18373490.1| signal recognition particle protein [Enterococcus faecium R446]
gi|424962238|ref|ZP_18376608.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|424962648|ref|ZP_18376966.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|424968649|ref|ZP_18382259.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|424972691|ref|ZP_18386013.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|424975462|ref|ZP_18388619.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|424978927|ref|ZP_18391807.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|424980489|ref|ZP_18393283.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|424985230|ref|ZP_18397718.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|424988719|ref|ZP_18401022.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|424992574|ref|ZP_18404627.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|424996450|ref|ZP_18408257.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|424999108|ref|ZP_18410749.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|424999881|ref|ZP_18411474.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|425006151|ref|ZP_18417344.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|425009463|ref|ZP_18420482.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|425012624|ref|ZP_18423426.1| signal recognition particle protein [Enterococcus faecium E422]
gi|425015748|ref|ZP_18426339.1| signal recognition particle protein [Enterococcus faecium E417]
gi|425019469|ref|ZP_18429832.1| signal recognition particle protein [Enterococcus faecium C621]
gi|425020205|ref|ZP_18430524.1| signal recognition particle protein [Enterococcus faecium C497]
gi|425023133|ref|ZP_18433270.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|425035379|ref|ZP_18440220.1| signal recognition particle protein [Enterococcus faecium 514]
gi|425040142|ref|ZP_18444628.1| signal recognition particle protein [Enterococcus faecium 513]
gi|425043894|ref|ZP_18448093.1| signal recognition particle protein [Enterococcus faecium 511]
gi|425045035|ref|ZP_18449158.1| signal recognition particle protein [Enterococcus faecium 510]
gi|425050560|ref|ZP_18454293.1| signal recognition particle protein [Enterococcus faecium 509]
gi|425051000|ref|ZP_18454694.1| signal recognition particle protein [Enterococcus faecium 506]
gi|425055763|ref|ZP_18459232.1| signal recognition particle protein [Enterococcus faecium 505]
gi|425058389|ref|ZP_18461771.1| signal recognition particle protein [Enterococcus faecium 504]
gi|425062030|ref|ZP_18465213.1| signal recognition particle protein [Enterococcus faecium 503]
gi|427396388|ref|ZP_18889147.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430819711|ref|ZP_19438357.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430822757|ref|ZP_19441332.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430825710|ref|ZP_19443912.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430827813|ref|ZP_19445944.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430830914|ref|ZP_19448970.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430832888|ref|ZP_19450904.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430837718|ref|ZP_19455678.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430838321|ref|ZP_19456268.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430843828|ref|ZP_19461727.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430848123|ref|ZP_19465953.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430849397|ref|ZP_19467177.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430857923|ref|ZP_19475554.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430860428|ref|ZP_19478028.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430865375|ref|ZP_19481073.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430876823|ref|ZP_19483925.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430948278|ref|ZP_19485867.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|431003805|ref|ZP_19488903.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|431147517|ref|ZP_19499227.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|431230043|ref|ZP_19502246.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|431252112|ref|ZP_19504170.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|431373172|ref|ZP_19510081.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|431413391|ref|ZP_19512150.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|431497436|ref|ZP_19514590.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|431542316|ref|ZP_19518344.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|431730890|ref|ZP_19525566.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|431742899|ref|ZP_19531782.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|431746433|ref|ZP_19535259.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|431750302|ref|ZP_19539022.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|431755033|ref|ZP_19543691.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|431759542|ref|ZP_19548154.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|431764354|ref|ZP_19552897.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|431767459|ref|ZP_19555911.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|431780833|ref|ZP_19568998.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|431781698|ref|ZP_19569842.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|431785919|ref|ZP_19573940.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|447912364|ref|YP_007393776.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
gi|68194411|gb|EAN08916.1| Signal recognition particle protein [Enterococcus faecium DO]
gi|257812848|gb|EEV41606.1| signal recognition particle protein [Enterococcus faecium
1,230,933]
gi|257818778|gb|EEV46106.1| signal recognition particle protein [Enterococcus faecium
1,231,502]
gi|257828227|gb|EEV54853.1| signal recognition particle protein [Enterococcus faecium
1,231,410]
gi|257830816|gb|EEV57423.1| signal recognition particle protein [Enterococcus faecium
1,231,408]
gi|260074693|gb|EEW63013.1| signal recognition particle protein [Enterococcus faecium C68]
gi|260077767|gb|EEW65480.1| signal recognition particle protein [Enterococcus faecium TC 6]
gi|289161301|gb|EFD09194.1| signal recognition particle protein [Enterococcus faecium D344SRF]
gi|291590019|gb|EFF21813.1| signal recognition particle protein [Enterococcus faecium E1071]
gi|291591529|gb|EFF23182.1| signal recognition particle protein [Enterococcus faecium E1636]
gi|291593943|gb|EFF25427.1| signal recognition particle protein [Enterococcus faecium E1679]
gi|291601357|gb|EFF31635.1| signal recognition particle protein [Enterococcus faecium E1039]
gi|291604211|gb|EFF33712.1| signal recognition particle protein [Enterococcus faecium E1162]
gi|313588547|gb|EFR67392.1| signal recognition particle protein [Enterococcus faecium
TX0133a01]
gi|313593001|gb|EFR71846.1| signal recognition particle protein [Enterococcus faecium TX0133B]
gi|313595279|gb|EFR74124.1| signal recognition particle protein [Enterococcus faecium TX0133A]
gi|313597720|gb|EFR76565.1| signal recognition particle protein [Enterococcus faecium TX0133C]
gi|313642569|gb|EFS07149.1| signal recognition particle protein [Enterococcus faecium
TX0133a04]
gi|313644380|gb|EFS08960.1| signal recognition particle protein [Enterococcus faecium TX0082]
gi|364089611|gb|EHM32283.1| signal recognition particle protein [Enterococcus faecium E4452]
gi|364092330|gb|EHM34712.1| signal recognition particle protein [Enterococcus faecium E4453]
gi|378938890|gb|AFC63962.1| signal recognition particle protein [Enterococcus faecium Aus0004]
gi|388534272|gb|AFK59464.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium DO]
gi|402916210|gb|EJX37106.1| signal recognition particle protein [Enterococcus faecium R501]
gi|402919953|gb|EJX40511.1| signal recognition particle protein [Enterococcus faecium S447]
gi|402924607|gb|EJX44804.1| signal recognition particle protein [Enterococcus faecium V689]
gi|402928616|gb|EJX48462.1| signal recognition particle protein [Enterococcus faecium R499]
gi|402929375|gb|EJX49141.1| signal recognition particle protein [Enterococcus faecium R497]
gi|402930680|gb|EJX50312.1| signal recognition particle protein [Enterococcus faecium R496]
gi|402938666|gb|EJX57652.1| signal recognition particle protein [Enterococcus faecium R446]
gi|402939172|gb|EJX58110.1| signal recognition particle protein [Enterococcus faecium R494]
gi|402941446|gb|EJX60175.1| signal recognition particle protein [Enterococcus faecium P1986]
gi|402951133|gb|EJX69084.1| signal recognition particle protein [Enterococcus faecium P1140]
gi|402951484|gb|EJX69407.1| signal recognition particle protein [Enterococcus faecium P1190]
gi|402952859|gb|EJX70629.1| signal recognition particle protein [Enterococcus faecium P1139]
gi|402953431|gb|EJX71149.1| signal recognition particle protein [Enterococcus faecium P1137]
gi|402959911|gb|EJX77113.1| signal recognition particle protein [Enterococcus faecium P1123]
gi|402966338|gb|EJX82977.1| signal recognition particle protein [Enterococcus faecium ERV69]
gi|402966421|gb|EJX83049.1| signal recognition particle protein [Enterococcus faecium ERV99]
gi|402971075|gb|EJX87376.1| signal recognition particle protein [Enterococcus faecium ERV38]
gi|402972744|gb|EJX88923.1| signal recognition particle protein [Enterococcus faecium ERV26]
gi|402973572|gb|EJX89685.1| signal recognition particle protein [Enterococcus faecium ERV168]
gi|402980395|gb|EJX96006.1| signal recognition particle protein [Enterococcus faecium ERV165]
gi|402984170|gb|EJX99494.1| signal recognition particle protein [Enterococcus faecium ERV102]
gi|402989128|gb|EJY04080.1| signal recognition particle protein [Enterococcus faecium ERV1]
gi|402990604|gb|EJY05473.1| signal recognition particle protein [Enterococcus faecium ERV161]
gi|402992577|gb|EJY07267.1| signal recognition particle protein [Enterococcus faecium E422]
gi|402994145|gb|EJY08702.1| signal recognition particle protein [Enterococcus faecium E417]
gi|402997904|gb|EJY12200.1| signal recognition particle protein [Enterococcus faecium C621]
gi|403009720|gb|EJY23146.1| signal recognition particle protein [Enterococcus faecium C497]
gi|403010704|gb|EJY24057.1| signal recognition particle protein [Enterococcus faecium C1904]
gi|403013586|gb|EJY26670.1| signal recognition particle protein [Enterococcus faecium 513]
gi|403017560|gb|EJY30299.1| signal recognition particle protein [Enterococcus faecium 511]
gi|403018194|gb|EJY30891.1| signal recognition particle protein [Enterococcus faecium 514]
gi|403023055|gb|EJY35348.1| signal recognition particle protein [Enterococcus faecium 509]
gi|403028037|gb|EJY39881.1| signal recognition particle protein [Enterococcus faecium 510]
gi|403033144|gb|EJY44663.1| signal recognition particle protein [Enterococcus faecium 505]
gi|403038537|gb|EJY49749.1| signal recognition particle protein [Enterococcus faecium 504]
gi|403039030|gb|EJY50209.1| signal recognition particle protein [Enterococcus faecium 506]
gi|403039670|gb|EJY50804.1| signal recognition particle protein [Enterococcus faecium 503]
gi|404453120|gb|EKA00214.1| signal recognition particle protein [Enterococcus sp. GMD4E]
gi|404456877|gb|EKA03486.1| signal recognition particle protein [Enterococcus sp. GMD3E]
gi|404462274|gb|EKA08055.1| signal recognition particle protein [Enterococcus sp. GMD2E]
gi|404468030|gb|EKA13066.1| signal recognition particle protein [Enterococcus sp. GMD1E]
gi|410735141|gb|EKQ77057.1| Sec family Type I general secretory pathway protein signal
recognition particle protein [Enterococcus sp. GMD5E]
gi|425723058|gb|EKU85949.1| signal recognition particle protein [Enterococcus durans
FB129-CNAB-4]
gi|430440303|gb|ELA50571.1| signal recognition particle protein [Enterococcus faecium E0045]
gi|430442686|gb|ELA52707.1| signal recognition particle protein [Enterococcus faecium E0120]
gi|430445868|gb|ELA55581.1| signal recognition particle protein [Enterococcus faecium E0164]
gi|430482503|gb|ELA59621.1| signal recognition particle protein [Enterococcus faecium E0333]
gi|430484159|gb|ELA61189.1| signal recognition particle protein [Enterococcus faecium E0269]
gi|430486938|gb|ELA63767.1| signal recognition particle protein [Enterococcus faecium E0679]
gi|430487045|gb|ELA63824.1| signal recognition particle protein [Enterococcus faecium E0680]
gi|430491916|gb|ELA68365.1| signal recognition particle protein [Enterococcus faecium E0688]
gi|430497687|gb|ELA73724.1| signal recognition particle protein [Enterococcus faecium E1050]
gi|430535954|gb|ELA76342.1| signal recognition particle protein [Enterococcus faecium E1133]
gi|430537855|gb|ELA78169.1| signal recognition particle protein [Enterococcus faecium E1185]
gi|430546403|gb|ELA86362.1| signal recognition particle protein [Enterococcus faecium E1552]
gi|430552087|gb|ELA91833.1| signal recognition particle protein [Enterococcus faecium E1573]
gi|430553028|gb|ELA92741.1| signal recognition particle protein [Enterococcus faecium E1574]
gi|430557495|gb|ELA96952.1| signal recognition particle protein [Enterococcus faecium E1575]
gi|430558051|gb|ELA97483.1| signal recognition particle protein [Enterococcus faecium E1576]
gi|430561894|gb|ELB01148.1| signal recognition particle protein [Enterococcus faecium E1578]
gi|430574029|gb|ELB12807.1| signal recognition particle protein [Enterococcus faecium E1622]
gi|430575641|gb|ELB14346.1| signal recognition particle protein [Enterococcus faecium E1620]
gi|430578538|gb|ELB17090.1| signal recognition particle protein [Enterococcus faecium E1623]
gi|430583317|gb|ELB21701.1| signal recognition particle protein [Enterococcus faecium E1627]
gi|430588371|gb|ELB26563.1| signal recognition particle protein [Enterococcus faecium E1634]
gi|430589299|gb|ELB27437.1| signal recognition particle protein [Enterococcus faecium E1630]
gi|430592880|gb|ELB30881.1| signal recognition particle protein [Enterococcus faecium E1731]
gi|430595449|gb|ELB33352.1| signal recognition particle protein [Enterococcus faecium E1904]
gi|430607562|gb|ELB44874.1| signal recognition particle protein [Enterococcus faecium E2071]
gi|430608667|gb|ELB45906.1| signal recognition particle protein [Enterococcus faecium E2134]
gi|430609840|gb|ELB47013.1| signal recognition particle protein [Enterococcus faecium E2297]
gi|430618019|gb|ELB54876.1| signal recognition particle protein [Enterococcus faecium E2883]
gi|430625942|gb|ELB62541.1| signal recognition particle protein [Enterococcus faecium E3346]
gi|430630973|gb|ELB67311.1| signal recognition particle protein [Enterococcus faecium E1321]
gi|430631539|gb|ELB67861.1| signal recognition particle protein [Enterococcus faecium E4215]
gi|430638743|gb|ELB74653.1| signal recognition particle protein [Enterococcus faecium E4389]
gi|430646636|gb|ELB82107.1| signal recognition particle protein [Enterococcus faecium E6045]
gi|430648916|gb|ELB84305.1| signal recognition particle protein [Enterococcus faecium E6012]
gi|445188073|gb|AGE29715.1| Signal recognition particle, subunit Ffh SRP54 [Enterococcus
faecium NRRL B-2354]
Length = 472
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T K+A +L +++ ++ A D +R A++QL+ ++
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L VP+F+ G E P + ++ ++ A +D VL+DTAGR+ +E LM L ++ L P
Sbjct: 156 LDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKELTQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ +L V +A+ G DAV+ FNQ+L I G+++TK D D + GAALS+
Sbjct: 216 NEILLVVDAMTGQDAVNVADSFNQQLG----------ITGVVITKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+GAP+ F+G G+ TDL+
Sbjct: 265 SVTGAPIKFIGSGEKLTDLE 284
>gi|385815998|ref|YP_005852389.1| Signal recognition protein Ffh [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126035|gb|ADY85365.1| Signal recognition protein Ffh [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 467
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 138/250 (55%), Gaps = 23/250 (9%)
Query: 339 LKALKDRLMTKNVAAMEEALVRILTP-RRSIDILRD----------VHAAKEQRKPYVVV 387
K +KD + T A+ + + LTP ++ I I+ + V K P V++
Sbjct: 46 FKVVKDFIKTIKKRALGQEVQESLTPGQQVIKIVNEELTKMMGEEAVGLTKSPHIPTVIM 105
Query: 388 FVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGY 446
VG+ G GK+T + K+AY L+ + K + A D +R A++QL+ L+VP++
Sbjct: 106 MVGLQGTGKTTTVGKLAYRLMKEEKARPFLIAGDIYRPAAIDQLKQIGADLKVPVYSDPE 165
Query: 447 EKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEAL 506
EK A + ++ + EA + +D V++DTAGR++ +EPLM+ L ++ ++ PD +L V +A+
Sbjct: 166 EKSVAKIVEDGLAEAAVHRNDYVIIDTAGRLEIDEPLMKELEEVKAVSQPDNILLVVDAM 225
Query: 507 VGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFV 566
G A D FN++L + G++LTK D D + GAALS+ ++G P++F
Sbjct: 226 TGQVAADVAKTFNERLD----------VTGVILTKLDG-DTRGGAALSIRAITGKPILFT 274
Query: 567 GCGQSYTDLK 576
G G+ TDL+
Sbjct: 275 GQGEKLTDLE 284
>gi|422821249|ref|ZP_16869442.1| signal recognition particle protein [Streptococcus sanguinis SK353]
gi|324991163|gb|EGC23097.1| signal recognition particle protein [Streptococcus sanguinis SK353]
Length = 524
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T ++F+++ K + ++D++ A K ++ L+ +VA A+ ++
Sbjct: 7 TERLQNVFKNLRRKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVI 66
Query: 360 RILTPRRSIDILRD-----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P + I + D K + P +++ VG+ G GK+T K+A L
Sbjct: 67 DTLNPAQQIIKIVDEELTTILGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLK 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T +++ VP+F G E + ++ +++A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAKANHND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM+ LS + L NP+ +L V +A++G +A + +FN +L
Sbjct: 187 YVLIDTAGRLQIDEKLMQELSDVKALANPNEILLVVDAMIGQEAANVAREFNSQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|188585994|ref|YP_001917539.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350681|gb|ACB84951.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 447
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 150/281 (53%), Gaps = 36/281 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTP-R 365
F + GK +++ D++ A++ ++ L+ +V A+ E ++ LTP +
Sbjct: 13 FGKLTGKGKVNEKDVKEAMREVRLALLEADVNYKVVKEFVNNVKERAVGEEVLESLTPGQ 72
Query: 366 RSIDILRD----------VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ I I+RD + P V++ G+ G GK+T AK+A + + +
Sbjct: 73 QVIKIVRDELTQLMGGEVSEVNFSDQPPTVIMLSGLQGTGKTTASAKLAKKFKKDGKNPL 132
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
M ACDT R A++QL+ + +P+F G ++ PA +AK A++ A +N DVV++DTAG
Sbjct: 133 MVACDTQRPAAIKQLQVLGEQTDIPVFSMGDKQHPADIAKGAVEHAKKNQMDVVILDTAG 192
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ +E LM L ++ P +L V +A+ G DAV+ +F+Q L DLS
Sbjct: 193 RLHIDEDLMTELREVESSVEPHEILLVVDAMTGQDAVNVAERFDQDL-DLS--------- 242
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
GI++TK D D + GAALS+ V+G P+ F+G G+ +L+
Sbjct: 243 GIVMTKLDG-DTRGGAALSVKKVTGKPIKFIGTGEKVDELE 282
>gi|335996783|ref|ZP_08562700.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|417974277|ref|ZP_12615098.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
gi|335351853|gb|EGM53344.1| signal recognition particle protein [Lactobacillus ruminis SPM0211]
gi|346329274|gb|EGX97572.1| signal recognition particle protein [Lactobacillus ruminis ATCC
25644]
Length = 481
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 12/203 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRT 432
V K ++ P V++ VG+ G GK+T K+AY L + + +M A D +R AV+QL+T
Sbjct: 92 VSLNKSKKIPTVIMMVGLQGAGKTTTAGKLAYKLKKEENARPLMIAADVYRPAAVDQLKT 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+ + VP+FE G + DP + ++ ++ A +D V++DTAGR+Q +E LM L+++
Sbjct: 152 VGKSIDVPVFELGTDVDPVEIVRQGMKLAEEQKNDYVIIDTAGRLQIDEKLMNELARIKE 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
L +PD +L +++ G +AV+ FN L + G++LTK D D + GAA
Sbjct: 212 LTHPDEILLTVDSMTGQNAVEVAQGFNDTLD----------VTGVVLTKLDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDL 575
LS+ V+G P+ F+G G+ T L
Sbjct: 261 LSIRAVTGKPIKFIGQGEKMTAL 283
>gi|170758261|ref|YP_001787761.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169405250|gb|ACA53661.1| signal recognition particle protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 449
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 11/192 (5%)
Query: 385 VVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
V++ VG+ G GK+T K+A L + ++ ACD +R A++QL+ +++ +P+F
Sbjct: 103 VIMLVGLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTM 162
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGE 504
G + +P ++K AI+ A N ++VV++DTAGR+ +E LM L + NP +L V +
Sbjct: 163 GDKLNPVDISKAAIEHAKNNKNNVVIIDTAGRLHIDEELMDELHNIKGEVNPSEILLVVD 222
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
A+ G DAV+ + FN KL I G++LTK D D + GAALS+ ++G P+
Sbjct: 223 AMTGQDAVNVANNFNDKLD----------ISGVILTKLDG-DTRGGAALSIKSMTGKPIK 271
Query: 565 FVGCGQSYTDLK 576
FVG G+ DL+
Sbjct: 272 FVGLGEKMNDLE 283
>gi|450071676|ref|ZP_21848262.1| signal recognition particle protein [Streptococcus mutans M2A]
gi|449212110|gb|EMC12488.1| signal recognition particle protein [Streptococcus mutans M2A]
Length = 516
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 154/292 (52%), Gaps = 37/292 (12%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--------------AMEEALV 359
T +F+++ GK L + D++ K ++ L+ +VA A+ ++
Sbjct: 7 TERLQGVFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVI 66
Query: 360 RILTP-RRSIDILRDVHAA----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLL 408
L P ++ I I+ + A K + P +++ VG+ G GK+T K+A L+
Sbjct: 67 DTLDPSQQIIKIVNEELTAVLGSETAEIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKLV 126
Query: 409 QHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
+ + +M A D +R A++QL+T ++++VP+F+ G + + + + +A N +D
Sbjct: 127 KEENARPLMIAADIYRPAAIDQLKTLGQQIKVPVFDMGTDHSAVEIVSQGLAQAKENRND 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSS 527
VL+DTAGR+Q +E LM L + L NP+ +L V ++++G +A + +FNQ+L
Sbjct: 187 YVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE---- 242
Query: 528 SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ G++LTK D D + GAALS+ ++G P+ F G G+ TD++ +
Sbjct: 243 ------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIETFH 287
>gi|404497721|ref|YP_006721827.1| signal recognition particle protein [Geobacter metallireducens
GS-15]
gi|418068002|ref|ZP_12705326.1| signal recognition particle protein [Geobacter metallireducens
RCH3]
gi|78195323|gb|ABB33090.1| signal recognition particle protein [Geobacter metallireducens
GS-15]
gi|373557781|gb|EHP84167.1| signal recognition particle protein [Geobacter metallireducens
RCH3]
Length = 452
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 11/208 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P ++ VG+ G GK+T K+A L + ++ D +R A+EQLRT R+L V
Sbjct: 99 KPPVALMMVGLQGSGKTTTCGKLARLLKGQRRRPLLVPADVYRPAAIEQLRTLGRQLSVE 158
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
F+ ++DP + +EA++ AT NG D V++DTAGR+Q +E LM L ++ P +L
Sbjct: 159 TFDSRADQDPVDICREALRYATLNGFDTVILDTAGRLQIDEYLMNELVRIKEAVQPREIL 218
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A+ G +AV+ + FN++L I G++LTK D D K GAALS+ V+G
Sbjct: 219 FVADAMTGQEAVNVATGFNERLD----------ITGVVLTKLDG-DAKGGAALSIRAVTG 267
Query: 561 APVMFVGCGQSYTDLKKLNVKSIVKTLL 588
PV VG G+ L+ +V +L
Sbjct: 268 KPVKLVGLGEKLDALEVFYPDRLVSRIL 295
>gi|312143704|ref|YP_003995150.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
gi|311904355|gb|ADQ14796.1| signal recognition particle protein [Halanaerobium
hydrogeniformans]
Length = 445
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 151/293 (51%), Gaps = 36/293 (12%)
Query: 321 FQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRILTPRR 366
F + GK L ++D++ ALK +K L+ +V A+ + ++ LTP +
Sbjct: 14 FDKLRGKGKLSESDVKSALKEVKMALLEADVNYKVVKRFVNKIEERAVGKEVMDSLTPAQ 73
Query: 367 SI-----DILRDVHAAKEQR------KPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVM 415
+ + ++++ ++ P +++ VG+ G GK+T+ K+A L + +
Sbjct: 74 QVIKIVNEEMQNLMGGSQEEINISPDPPTIIMMVGLQGSGKTTSAGKLARMLSNKGKNPL 133
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ A D +R A+ QL+ RL +P+F G + DP +AK +I A+ + D +++DTAG
Sbjct: 134 LVAADVYRPAAIRQLQVLGERLDLPVFSMGEDSDPVDIAKGSINFASTHNCDTIILDTAG 193
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R+ ++ +M L + +PD +L V +A+ G DAV+ F+++L ID
Sbjct: 194 RLHIDQEMMEELEGIKGAVDPDEILLVVDAMTGQDAVNVAQNFDKRLD----------ID 243
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
GILLTK D D + GAALS+ ++G P+ F G G+ DL+ + + +L
Sbjct: 244 GILLTKMDG-DARGGAALSIKEITGKPIKFAGTGEKLADLEPFHPDRMASRIL 295
>gi|225018488|ref|ZP_03707680.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
gi|224948689|gb|EEG29898.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
DSM 5476]
Length = 453
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 153/297 (51%), Gaps = 37/297 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV---------AAMEEA-----LVRIL 362
S+ F+ + K L ++D++ A++ +K L+ +V A + E ++ L
Sbjct: 10 LSAAFKRLKSKGKLTESDVKLAMREVKLALLEADVNYKVVKDFVAKVSERSVGSDVLESL 69
Query: 363 TPRRSI---------DILRDVHAAKE--QRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK 411
TP + + ++ H E + P V++ G+ G GK+T+ AK+A +
Sbjct: 70 TPAQQVIKIVNEELCSLMGSEHTRIEFPSKPPCVIMMCGLQGSGKTTHSAKLAKYFKSQG 129
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLV 471
++ ACD +R A++QL+ + +FE G DP +AKEA++ A G+D+V++
Sbjct: 130 HRPLLVACDVYRPAAIQQLKVVGEKAGASVFEMG-NTDPVEIAKEALKHAKDYGNDLVIL 188
Query: 472 DTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNP 531
DTAGR+ +E LM L + NP+ +L V +++ G DAV+ FN+ L
Sbjct: 189 DTAGRLHIDEQLMNELKNIKAEVNPNEILLVVDSMTGQDAVNVAKSFNETLE-------- 240
Query: 532 QLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDG++LTK D D + GAALS++ V+G PV F G G+ DL+ + + + +L
Sbjct: 241 --IDGVILTKLDG-DTRGGAALSVLAVTGKPVKFAGIGEKLDDLEPFHPERMASRIL 294
>gi|395242479|ref|ZP_10419476.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
gi|394480211|emb|CCI85716.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
Length = 476
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 120/204 (58%), Gaps = 12/204 (5%)
Query: 374 VHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRT 432
V K + P +++ VG+ G GK+T + K+AY L + ++ A D +R A++QL+
Sbjct: 92 VKLTKSKHIPTIIMMVGLQGTGKTTTVGKLAYHLQKTEHARPLLIAGDIYRPAAIDQLKQ 151
Query: 433 HARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIY 492
+L+VP+F K EKD A + +E + EA +N +D V++DTAGR++ +E LM L ++
Sbjct: 152 IGEQLEVPVFSKPDEKDVAKIVEEGLAEADKNKNDYVIIDTAGRLEIDEKLMDELERVKA 211
Query: 493 LNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
+ P+ +L V +A+ G A D F+++L + G++LTK D D + GAA
Sbjct: 212 VAKPENILLVVDAMTGQAATDVARGFDERLD----------VTGVILTKLDG-DTRGGAA 260
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLK 576
LS+ V+G P+++ G G+ TDL+
Sbjct: 261 LSIRAVTGKPIIYTGQGEKLTDLE 284
>gi|227551902|ref|ZP_03981951.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257884147|ref|ZP_05663800.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257886935|ref|ZP_05666588.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257895507|ref|ZP_05675160.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257898122|ref|ZP_05677775.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|293378372|ref|ZP_06624541.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|293571524|ref|ZP_06682547.1| signal recognition particle protein [Enterococcus faecium E980]
gi|424766376|ref|ZP_18193729.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430841665|ref|ZP_19459584.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430851902|ref|ZP_19469637.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430855109|ref|ZP_19472820.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|431033237|ref|ZP_19491083.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|431076960|ref|ZP_19494996.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|431108321|ref|ZP_19497472.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|431586239|ref|ZP_19520754.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|431737188|ref|ZP_19526142.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|431739675|ref|ZP_19528595.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|431752200|ref|ZP_19540884.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|431757047|ref|ZP_19545678.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|431762305|ref|ZP_19550867.1| signal recognition particle protein [Enterococcus faecium E3548]
gi|227178974|gb|EEI59946.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Enterococcus faecium
TX1330]
gi|257819985|gb|EEV47133.1| signal recognition particle protein [Enterococcus faecium
1,231,501]
gi|257822989|gb|EEV49921.1| signal recognition particle protein [Enterococcus faecium
1,141,733]
gi|257832072|gb|EEV58493.1| signal recognition particle protein [Enterococcus faecium Com12]
gi|257836034|gb|EEV61108.1| signal recognition particle protein [Enterococcus faecium Com15]
gi|291608390|gb|EFF37689.1| signal recognition particle protein [Enterococcus faecium E980]
gi|292643236|gb|EFF61377.1| signal recognition particle protein [Enterococcus faecium PC4.1]
gi|402410897|gb|EJV43285.1| signal recognition particle protein [Enterococcus faecium TX1337RF]
gi|430494441|gb|ELA70691.1| signal recognition particle protein [Enterococcus faecium E1007]
gi|430542484|gb|ELA82592.1| signal recognition particle protein [Enterococcus faecium E1258]
gi|430547647|gb|ELA87570.1| signal recognition particle protein [Enterococcus faecium E1392]
gi|430564338|gb|ELB03522.1| signal recognition particle protein [Enterococcus faecium E1590]
gi|430566415|gb|ELB05528.1| signal recognition particle protein [Enterococcus faecium E1604]
gi|430569445|gb|ELB08449.1| signal recognition particle protein [Enterococcus faecium E1613]
gi|430593417|gb|ELB31403.1| signal recognition particle protein [Enterococcus faecium E1861]
gi|430598845|gb|ELB36561.1| signal recognition particle protein [Enterococcus faecium E1972]
gi|430604291|gb|ELB41782.1| signal recognition particle protein [Enterococcus faecium E2039]
gi|430614124|gb|ELB51117.1| signal recognition particle protein [Enterococcus faecium E2620]
gi|430619336|gb|ELB56163.1| signal recognition particle protein [Enterococcus faecium E3083]
gi|430624997|gb|ELB61647.1| signal recognition particle protein [Enterococcus faecium E3548]
Length = 472
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 378 KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARR 436
K + P V++ G+ G GK+T K+A +L +++ ++ A D +R A++QL+ ++
Sbjct: 96 KSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQ 155
Query: 437 LQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
L VP+F+ G E P + ++ ++ A +D VL+DTAGR+ +E LM L ++ L P
Sbjct: 156 LDVPVFDMGTEVSPVEIVRQGMELAREKKNDYVLIDTAGRLHIDETLMDELKQIKELTQP 215
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
+ +L V +A+ G DAV+ FNQ+L I G+++TK D D + GAALS+
Sbjct: 216 NEILLVVDAMTGQDAVNVADSFNQQLG----------ITGVVITKLDG-DTRGGAALSIR 264
Query: 557 YVSGAPVMFVGCGQSYTDLK 576
V+GAP+ F+G G+ TDL+
Sbjct: 265 SVTGAPIKFIGSGEKLTDLE 284
>gi|148906612|gb|ABR16458.1| unknown [Picea sitchensis]
Length = 573
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF 442
P V++ G+ GVGK+T AK+A +L + + M+ A D +R A++QL ++++VP++
Sbjct: 185 PTVILMAGLQGVGKTTACAKLALYLKKKGKNCMLVAADVYRPAAIDQLVILGKQVEVPVY 244
Query: 443 EKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFV 502
E G + P +AK+ ++EA + DVV+VDTAGR+Q ++ +M L ++ NP VL V
Sbjct: 245 EAGTKVTPMEIAKQGLEEAKKKDMDVVIVDTAGRLQVDKSMMDELKQVKQAMNPTEVLLV 304
Query: 503 GEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAP 562
+A+ G +A ++ FN ++ I G +LTK D D + GAALS+ VSG P
Sbjct: 305 VDAMTGQEAAALVAAFNLEIG----------ITGAILTKLDG-DSRGGAALSVREVSGKP 353
Query: 563 VMFVGCGQSYTDLK 576
+ FVG G+ DL+
Sbjct: 354 IKFVGQGERMEDLE 367
>gi|296133550|ref|YP_003640797.1| signal recognition particle protein [Thermincola potens JR]
gi|296032128|gb|ADG82896.1| signal recognition particle protein [Thermincola potens JR]
Length = 450
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 11/196 (5%)
Query: 381 RKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
+ P VV+ VG+ G GK+T + K+ L + ++ A D +R A++QL+ +L +P
Sbjct: 99 KPPTVVMLVGLQGAGKTTTVGKLGNQLRKQGRRPLLVAADVYRPAAIKQLKVLGEQLNIP 158
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVL 500
+F G + +P +AK A++ A G+D+VL+DTAGR+ NE LM L + P +L
Sbjct: 159 VFSLGDKTNPVDIAKAAVEHAKSYGNDMVLIDTAGRLHINEELMEELKNIKESVKPHEIL 218
Query: 501 FVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSG 560
FV +A G DAV+ F+++L IDG+++TK D D + GAALS+ V+G
Sbjct: 219 FVMDATTGQDAVNVAKTFDEQLG----------IDGVIITKLDG-DTRGGAALSVKAVTG 267
Query: 561 APVMFVGCGQSYTDLK 576
P+ FVG G+ L+
Sbjct: 268 KPIKFVGMGEKLDALE 283
>gi|194466489|ref|ZP_03072476.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
gi|194453525|gb|EDX42422.1| signal recognition particle protein [Lactobacillus reuteri 100-23]
Length = 481
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L ++ M A D +R A+ QL+ A ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FEKG + DP + +E ++ A +N +D V++DTAGR+Q +E LM L+ + L NP+ +L
Sbjct: 161 FEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +++ G +AV+ F+ KL I G++LTK D D + GAA+S+ V+G
Sbjct: 221 VIDSMTGQNAVNTAQGFDDKLN----------ITGVILTKLDG-DTRGGAAMSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGEGEKMEDL 283
>gi|363899272|ref|ZP_09325782.1| signal recognition particle protein [Oribacterium sp. ACB1]
gi|395209569|ref|ZP_10398663.1| signal recognition particle protein [Oribacterium sp. ACB8]
gi|361959109|gb|EHL12405.1| signal recognition particle protein [Oribacterium sp. ACB1]
gi|394705200|gb|EJF12729.1| signal recognition particle protein [Oribacterium sp. ACB8]
Length = 460
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 153/286 (53%), Gaps = 37/286 (12%)
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV--------------AAMEEALVRIL 362
S++FQ ++GK L + D+ ALK ++ L+ +V A+ E + L
Sbjct: 10 LSTIFQGLSGKGKLSEDDVNLALKEVRMALLEADVNFKLVKDFVAKVKEKAIGEEVFSSL 69
Query: 363 TPRRS-IDILRDVHAA-----------KEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 410
+P ++ I I+++ A + Q + V++ VG+ G GK+T AK+A +
Sbjct: 70 SPAQTVIKIVKEELTAMMGEENTELKLRPQSEITVLMMVGLQGAGKTTTAAKLAGKFQKM 129
Query: 411 KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVL 470
++ ACD +R A+EQLR +A +L +P F G + P +A+ A +EA G ++++
Sbjct: 130 HRKPLLVACDIYRPAAIEQLRVNAEKLSIPFFSLGNQIKPEEIAQRAYEEAKEKGYNLLI 189
Query: 471 VDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPN 530
+DTAGR+Q ++ LM+ L ++ D + +A+ G +AV+ F++ +
Sbjct: 190 LDTAGRLQIDDALMQELKRMKAAVPVDWTILTVDAMTGQEAVNVSQSFSEDIG------- 242
Query: 531 PQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+DG++LTK D D + GAALS+ ++G P++F+G G+ ++L+
Sbjct: 243 ---VDGVILTKCDG-DTRGGAALSIKAMTGQPILFLGMGEKLSELE 284
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 115/194 (59%), Gaps = 12/194 (6%)
Query: 383 PYVVVFVGVNGVGKSTNLAKVAYWLL-QHKVSVMMAACDTFRSGAVEQLRTHARRLQVPI 441
P V++ VG+ G GK+T K+A L ++ M A D +R A+ QL+ A ++ VP+
Sbjct: 101 PTVIMMVGLQGAGKTTTAGKLALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPV 160
Query: 442 FEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLF 501
FEKG + DP + +E ++ A +N +D V++DTAGR+Q +E LM L+ + L NP+ +L
Sbjct: 161 FEKGTDVDPVEIVREGMEVAKKNHNDYVIIDTAGRLQIDEQLMDELANIKELVNPNEILL 220
Query: 502 VGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGA 561
V +++ G +AV+ F+ KL I G++LTK D D + GAA+S+ V+G
Sbjct: 221 VIDSMTGQNAVNTAQGFDDKLN----------ITGVILTKLDG-DTRGGAAMSIRAVTGK 269
Query: 562 PVMFVGCGQSYTDL 575
P+ FVG G+ DL
Sbjct: 270 PIKFVGEGEKMEDL 283
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,174,907,422
Number of Sequences: 23463169
Number of extensions: 399874727
Number of successful extensions: 1424004
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9493
Number of HSP's successfully gapped in prelim test: 2746
Number of HSP's that attempted gapping in prelim test: 1392092
Number of HSP's gapped (non-prelim): 17621
length of query: 589
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 441
effective length of database: 8,886,646,355
effective search space: 3919011042555
effective search space used: 3919011042555
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)