Query 007790
Match_columns 589
No_of_seqs 430 out of 2145
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:34:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007790.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007790hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 9.3E-23 3.2E-27 193.2 15.0 136 14-150 6-147 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 1.4E-22 4.7E-27 205.5 12.2 139 8-147 82-226 (269)
3 2rfm_A Putative ankyrin repeat 99.9 1.1E-21 3.9E-26 186.4 13.1 145 8-153 31-181 (192)
4 4gpm_A Engineered protein OR26 99.9 2.1E-21 7.2E-26 183.9 14.5 126 8-134 33-164 (169)
5 4hbd_A KN motif and ankyrin re 99.9 6.3E-21 2.1E-25 193.4 16.7 146 8-154 107-265 (276)
6 1bi7_B P16INK4A, MTS1, multipl 99.9 3.2E-21 1.1E-25 178.0 12.8 143 3-146 3-151 (156)
7 2y1l_E Darpin-8.4; hydrolase-i 99.8 5.2E-21 1.8E-25 178.6 13.8 148 4-152 6-159 (169)
8 3v31_A Ankyrin repeat family A 99.8 7.2E-21 2.5E-25 176.6 13.7 143 11-154 2-150 (167)
9 1oy3_D Transcription factor in 99.8 6.9E-21 2.4E-25 189.9 14.5 141 8-149 41-235 (282)
10 1d9s_A Cyclin-dependent kinase 99.8 1.3E-20 4.6E-25 169.8 14.7 123 8-131 8-136 (136)
11 3hra_A Ankyrin repeat family p 99.8 1.1E-20 3.6E-25 180.0 14.5 145 8-153 35-192 (201)
12 3c5r_A BARD-1, BRCA1-associate 99.8 5.2E-21 1.8E-25 172.3 11.2 119 7-153 5-123 (137)
13 1awc_B Protein (GA binding pro 99.8 1.4E-20 4.9E-25 172.6 13.0 139 12-152 2-146 (153)
14 1sw6_A Regulatory protein SWI6 99.8 7.1E-21 2.4E-25 197.6 12.3 139 8-147 127-324 (327)
15 1yyh_A HN1;, notch 1, ankyrin 99.8 1.3E-20 4.6E-25 187.3 13.8 143 8-151 53-202 (253)
16 1yyh_A HN1;, notch 1, ankyrin 99.8 1.6E-20 5.4E-25 186.8 14.3 151 8-159 86-243 (253)
17 2dzn_A Probable 26S proteasome 99.8 1.3E-20 4.3E-25 182.7 12.5 145 8-153 32-188 (228)
18 1ikn_D Protein (I-kappa-B-alph 99.8 5.4E-21 1.8E-25 187.4 10.0 141 8-149 41-194 (236)
19 3v30_A DNA-binding protein rfx 99.8 1.8E-20 6.1E-25 174.8 12.8 142 12-154 2-150 (172)
20 2f8y_A Notch homolog 1, transl 99.8 5.5E-20 1.9E-24 177.8 16.3 142 8-150 21-169 (223)
21 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.4E-20 8.1E-25 171.7 12.6 142 10-152 3-150 (162)
22 3aaa_C Myotrophin, protein V-1 99.8 1.5E-20 5.1E-25 166.3 10.3 112 8-147 3-114 (123)
23 3aji_A 26S proteasome non-ATPa 99.8 5.8E-20 2E-24 178.7 15.4 142 8-150 36-183 (231)
24 3aji_A 26S proteasome non-ATPa 99.8 3.9E-20 1.3E-24 179.8 14.2 140 8-148 69-214 (231)
25 2f8y_A Notch homolog 1, transl 99.8 6.8E-20 2.3E-24 177.2 15.7 145 8-153 54-205 (223)
26 2rfa_A Transient receptor pote 99.8 4.9E-20 1.7E-24 179.6 14.5 142 11-153 2-168 (232)
27 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6E-20 2E-24 154.9 12.8 93 11-131 1-93 (93)
28 2jab_A H10-2-G3; HER2, darpin, 99.8 2.5E-20 8.7E-25 168.0 11.2 118 6-151 8-125 (136)
29 2etb_A Transient receptor pote 99.8 1.9E-20 6.3E-25 185.8 10.4 146 8-154 39-236 (256)
30 2dzn_A Probable 26S proteasome 99.8 6.1E-20 2.1E-24 177.9 13.7 136 12-148 2-149 (228)
31 3v30_A DNA-binding protein rfx 99.8 5.5E-20 1.9E-24 171.4 12.7 134 8-142 32-171 (172)
32 1s70_B 130 kDa myosin-binding 99.8 3.9E-20 1.3E-24 186.9 12.5 76 72-147 198-273 (299)
33 2rfa_A Transient receptor pote 99.8 8E-20 2.7E-24 178.0 14.0 147 8-154 33-212 (232)
34 1k1a_A B-cell lymphoma 3-encod 99.8 1.4E-19 4.7E-24 176.6 15.6 142 8-150 42-194 (241)
35 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.1E-19 7.1E-24 157.4 14.9 120 11-131 1-126 (126)
36 1k1a_A B-cell lymphoma 3-encod 99.8 6.9E-20 2.4E-24 178.7 12.9 147 8-154 75-231 (241)
37 1bd8_A P19INK4D CDK4/6 inhibit 99.8 7.1E-20 2.4E-24 167.7 12.2 139 12-152 2-146 (156)
38 3twr_A Tankyrase-2; ankyrin re 99.8 4.4E-20 1.5E-24 170.9 10.7 140 7-147 3-149 (165)
39 2xai_A ASB-9, ankyrin repeat a 99.8 7.8E-20 2.7E-24 182.8 12.9 142 8-152 32-179 (261)
40 3f6q_A Integrin-linked protein 99.8 9.2E-20 3.2E-24 171.5 12.0 139 10-149 3-148 (179)
41 3b7b_A Euchromatic histone-lys 99.8 8.4E-20 2.9E-24 178.2 11.9 145 8-153 40-191 (237)
42 1oy3_D Transcription factor in 99.8 9.5E-20 3.3E-24 181.6 12.6 142 8-150 5-203 (282)
43 2xai_A ASB-9, ankyrin repeat a 99.8 2.5E-19 8.4E-24 179.2 15.6 139 11-151 2-146 (261)
44 3b7b_A Euchromatic histone-lys 99.8 2.4E-19 8.1E-24 175.0 14.9 144 8-152 7-157 (237)
45 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.1E-20 7.1E-25 185.0 7.3 137 9-146 2-144 (239)
46 2l6b_A NR1C; ankyrin, consensu 99.8 8.5E-20 2.9E-24 159.3 9.4 110 6-143 3-112 (115)
47 3utm_A Tankyrase-1; tankyrase, 99.8 2.8E-19 9.7E-24 183.2 14.5 81 65-146 240-320 (351)
48 3ljn_A Hypothetical protein; a 99.8 2.2E-19 7.4E-24 187.5 13.2 143 8-151 49-223 (364)
49 3d9h_A CDNA FLJ77766, highly s 99.8 3.2E-19 1.1E-23 181.3 13.7 143 8-153 88-236 (285)
50 3d9h_A CDNA FLJ77766, highly s 99.8 4.6E-19 1.6E-23 180.0 14.9 143 7-151 54-202 (285)
51 3jxi_A Vanilloid receptor-rela 99.8 1.4E-19 4.9E-24 179.5 10.8 146 8-154 42-240 (260)
52 1n11_A Ankyrin; clathrin, BAND 99.8 3.8E-19 1.3E-23 190.0 14.7 141 8-149 241-387 (437)
53 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.2E-19 1.4E-23 163.3 12.6 122 8-131 34-162 (162)
54 3v31_A Ankyrin repeat family A 99.8 7.2E-19 2.5E-23 163.1 14.1 124 8-132 32-161 (167)
55 1awc_B Protein (GA binding pro 99.8 1.1E-18 3.9E-23 159.8 15.2 120 5-125 27-152 (153)
56 2etb_A Transient receptor pote 99.8 3.2E-19 1.1E-23 176.9 12.3 137 11-148 1-181 (256)
57 2y1l_E Darpin-8.4; hydrolase-i 99.8 9.4E-19 3.2E-23 163.3 14.5 121 8-129 43-169 (169)
58 3utm_A Tankyrase-1; tankyrase, 99.8 1.1E-18 3.6E-23 179.0 15.8 94 8-102 54-153 (351)
59 2pnn_A Transient receptor pote 99.8 2.3E-19 7.8E-24 179.9 10.5 146 8-153 50-247 (273)
60 1s70_B 130 kDa myosin-binding 99.8 5.7E-19 2E-23 178.3 13.1 143 7-150 35-243 (299)
61 3kea_A K1L; tropism, ANK repea 99.8 1.8E-19 6.2E-24 183.2 9.5 143 8-152 27-174 (285)
62 2rfm_A Putative ankyrin repeat 99.8 1.3E-18 4.6E-23 165.1 14.6 121 8-129 64-190 (192)
63 3ehr_A Osteoclast-stimulating 99.8 1.8E-19 6.3E-24 175.3 8.5 113 9-149 70-183 (222)
64 3deo_A Signal recognition part 99.8 2.7E-19 9.2E-24 169.6 9.1 113 8-149 40-153 (183)
65 3ljn_A Hypothetical protein; a 99.8 4E-19 1.4E-23 185.5 10.6 144 8-152 16-186 (364)
66 2pnn_A Transient receptor pote 99.8 5.2E-19 1.8E-23 177.3 11.0 133 8-141 97-269 (273)
67 3f6q_A Integrin-linked protein 99.8 4E-19 1.4E-23 167.1 9.5 127 8-135 35-167 (179)
68 4g8k_A 2-5A-dependent ribonucl 99.8 1.8E-18 6.1E-23 178.7 14.8 136 8-149 164-311 (337)
69 1n11_A Ankyrin; clathrin, BAND 99.8 1.2E-18 4.2E-23 186.1 13.7 143 8-151 10-158 (437)
70 1wdy_A 2-5A-dependent ribonucl 99.8 3E-18 1E-22 170.1 15.5 141 8-149 68-229 (285)
71 3twr_A Tankyrase-2; ankyrin re 99.8 1E-18 3.4E-23 161.7 11.1 122 7-130 37-164 (165)
72 1wdy_A 2-5A-dependent ribonucl 99.8 5.3E-18 1.8E-22 168.3 16.7 140 9-149 36-192 (285)
73 1ikn_D Protein (I-kappa-B-alph 99.8 2.9E-19 9.8E-24 175.1 7.1 143 7-150 3-162 (236)
74 2fo1_E LIN-12 protein; beta-ba 99.8 2.1E-18 7.3E-23 182.0 13.9 143 8-151 162-325 (373)
75 4b93_B Ankyrin repeat domain-c 99.8 9E-19 3.1E-23 177.4 10.4 144 8-152 48-198 (269)
76 3jxi_A Vanilloid receptor-rela 99.8 1E-18 3.4E-23 173.4 10.4 140 9-149 2-186 (260)
77 2vge_A RELA-associated inhibit 99.8 5.1E-19 1.7E-23 174.9 7.3 129 8-137 17-154 (229)
78 2fo1_E LIN-12 protein; beta-ba 99.8 2.5E-18 8.5E-23 181.5 12.8 145 8-153 195-360 (373)
79 3hra_A Ankyrin repeat family p 99.8 7.5E-18 2.6E-22 160.1 14.8 140 9-149 2-150 (201)
80 3ui2_A Signal recognition part 99.8 1.5E-18 5.1E-23 172.7 9.9 111 9-148 42-153 (244)
81 3t8k_A Uncharacterized protein 99.8 2.8E-19 9.5E-24 171.8 4.2 85 64-149 67-164 (186)
82 3eu9_A Huntingtin-interacting 99.7 7.5E-18 2.6E-22 163.2 13.7 142 8-150 38-188 (240)
83 3kea_A K1L; tropism, ANK repea 99.7 1.8E-18 6.2E-23 175.9 9.2 138 11-150 61-206 (285)
84 3eu9_A Huntingtin-interacting 99.7 8.5E-18 2.9E-22 162.8 13.5 144 7-150 4-153 (240)
85 1bd8_A P19INK4D CDK4/6 inhibit 99.7 7.8E-18 2.7E-22 154.1 12.4 118 8-128 32-155 (156)
86 2jab_A H10-2-G3; HER2, darpin, 99.7 1.1E-17 3.7E-22 150.6 12.9 94 8-129 43-136 (136)
87 4g8k_A 2-5A-dependent ribonucl 99.7 2.2E-17 7.7E-22 170.4 16.8 139 10-149 57-212 (337)
88 1ycs_B 53BP2, P53BP2; ankyrin 99.7 2.5E-18 8.4E-23 170.0 7.9 131 6-137 31-170 (239)
89 2zgd_A 3 repeat synthetic anky 99.7 1.4E-17 4.8E-22 145.1 11.0 93 5-125 17-109 (110)
90 2b0o_E UPLC1; arfgap, structur 99.7 2.6E-17 8.7E-22 169.7 14.0 132 11-149 150-296 (301)
91 1dcq_A PYK2-associated protein 99.7 5.6E-17 1.9E-21 165.2 13.0 96 8-131 165-263 (278)
92 3lvq_E ARF-GAP with SH3 domain 99.7 1.2E-16 4.1E-21 175.5 14.9 122 12-134 132-268 (497)
93 4hbd_A KN motif and ankyrin re 99.7 1.5E-16 5.2E-21 161.0 11.0 121 8-129 141-273 (276)
94 1dcq_A PYK2-associated protein 99.7 2.8E-16 9.6E-21 160.0 12.9 119 13-153 131-252 (278)
95 3jue_A Arfgap with coiled-coil 99.7 1.9E-16 6.5E-21 168.2 11.1 112 11-148 198-310 (368)
96 3ehr_A Osteoclast-stimulating 99.6 1.4E-16 4.9E-21 154.8 6.7 103 8-138 102-205 (222)
97 3aaa_C Myotrophin, protein V-1 99.6 1.7E-15 5.8E-20 133.7 11.2 80 8-115 36-115 (123)
98 2vge_A RELA-associated inhibit 99.6 2E-15 6.7E-20 149.1 12.5 118 28-146 1-128 (229)
99 1d9s_A Cyclin-dependent kinase 99.6 5.6E-16 1.9E-20 139.3 7.0 115 35-151 2-123 (136)
100 3c5r_A BARD-1, BRCA1-associate 99.6 2.3E-16 7.9E-21 141.7 4.4 94 8-129 39-132 (137)
101 3jue_A Arfgap with coiled-coil 99.6 2.5E-15 8.6E-20 159.6 12.6 94 10-131 233-326 (368)
102 1sw6_A Regulatory protein SWI6 99.6 6.2E-16 2.1E-20 160.3 7.6 107 8-117 197-327 (327)
103 3deo_A Signal recognition part 99.6 5.8E-16 2E-20 146.5 6.6 92 8-127 72-164 (183)
104 3ui2_A Signal recognition part 99.6 2.1E-15 7E-20 149.9 10.8 100 8-151 73-172 (244)
105 3t8k_A Uncharacterized protein 99.6 6.5E-16 2.2E-20 148.2 4.9 122 10-132 36-180 (186)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.6 5.4E-15 1.8E-19 124.3 8.6 81 72-152 1-81 (93)
107 1n0r_A 4ANK, 4 ankyrin repeats 99.5 1.8E-14 6E-19 125.7 10.4 108 43-151 4-113 (126)
108 1bi7_B P16INK4A, MTS1, multipl 99.5 6.8E-15 2.3E-19 135.3 6.4 108 42-151 13-123 (156)
109 2aja_A Ankyrin repeat family p 99.5 2.9E-16 9.8E-21 167.3 -5.6 119 9-129 89-222 (376)
110 2zgd_A 3 repeat synthetic anky 99.5 8.2E-14 2.8E-18 121.1 7.2 87 66-153 18-104 (110)
111 3lvq_E ARF-GAP with SH3 domain 99.4 1.8E-13 6.2E-18 150.2 9.1 109 44-153 135-254 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.4 1.4E-13 4.8E-18 119.6 5.8 83 67-150 4-86 (115)
113 2b0o_E UPLC1; arfgap, structur 99.4 3.3E-13 1.1E-17 138.9 9.2 108 45-153 155-273 (301)
114 2aja_A Ankyrin repeat family p 99.3 4.1E-13 1.4E-17 142.9 0.7 135 13-152 66-212 (376)
115 3zrh_A Ubiquitin thioesterase 46.3 34 0.0012 36.2 6.7 63 18-94 28-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=9.3e-23 Score=193.25 Aligned_cols=136 Identities=20% Similarity=0.201 Sum_probs=123.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHH----HHHHHHH--hhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 14 SPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQE----RVADQIA--SVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 14 TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e----~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
++|+.||..|+.++|+.||++|+++|..+..+.++++.+... .+..++. ++++.+|. .|+||||+||..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcCCHH
Confidence 479999999999999999999999999998888887665544 4455555 67889998 9999999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhh
Q 007790 88 AARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRR 150 (589)
Q Consensus 88 ~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~ 150 (589)
++++||++|+|+|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999997653
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=205.53 Aligned_cols=139 Identities=19% Similarity=0.157 Sum_probs=127.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|.+|+||||+||..|+.+++++||+.|++++..+..+.++++.+.. +.+..++. ++++.+|. .|+||||+||
T Consensus 82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~-~g~TpL~~A~ 160 (269)
T 4b93_B 82 TSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL-SGNTPLIYAC 160 (269)
T ss_dssp CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC-CCCCHHHHHH
Confidence 57899999999999999999999999999999888777777765544 44555555 67889998 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHH
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISV 147 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~ 147 (589)
..|+.+++++||++|+|+|.+|..|+||||+|+..|+.++|++|+++|++++..+..|+||+++|+
T Consensus 161 ~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 161 SGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp HTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred HCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999984
No 3
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.86 E-value=1.1e-21 Score=186.44 Aligned_cols=145 Identities=18% Similarity=0.186 Sum_probs=130.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
+|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. +.++.+|. .|+||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 109 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMWSI 109 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHH
Confidence 6889999999999999999999999999999988866666665554 455666666 67888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998764433
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.86 E-value=2.1e-21 Score=183.90 Aligned_cols=126 Identities=25% Similarity=0.252 Sum_probs=110.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
+|..|.||||+|+..++.++++.||+.|++++..+..+.||++.++ .+.+..++. +++|.+|. .|+||||+||
T Consensus 33 ~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~ 111 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAA 111 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHHHHH
Confidence 6889999999999999999999999999999999877777776654 455666766 68899998 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhH
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAW 134 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~ 134 (589)
..|+.+++++||++|+|++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 112 ~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 112 ENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999999999999999998853
No 5
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.85 E-value=6.3e-21 Score=193.36 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=129.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCccchhhhhh---------HHHHHHHHH--hhcCCCCCCCCCC
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLP-RLAADPSKIHTESDSLS---------QERVADQIA--SVLDRRDVPFRET 75 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Ga-din~~~~~l~tAl~~~~---------~e~~~~lI~--a~ln~~D~~~G~T 75 (589)
.|..|.||||+||..|+.+++++||+.|+ +++..+..+.++++.++ .+.+..++. ...+..|. .|+|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ-AGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT-TCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC-CCCC
Confidence 68899999999999999999999999998 99999988888887655 233444444 45667776 8999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH-hcCchhHHhhcCCchhHHHHHhhccch
Q 007790 76 PLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLK-LHHRSAWAKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 76 PLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~-~ga~~~~~~~~g~tPlllA~l~~~~Df 154 (589)
|||+||..|+.+++++||++|+|++.+|..|+||||+|+..|+.+++++|++ .|++++..+..|.||+++|+.....+.
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~i 265 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEI 265 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999 899999999999999999987654443
No 6
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=3.2e-21 Score=177.98 Aligned_cols=143 Identities=17% Similarity=0.014 Sum_probs=108.3
Q ss_pred CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh---hHHHHHHHHH--hhcCCCCCCCCCC-H
Q 007790 3 FPAIKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL---SQERVADQIA--SVLDRRDVPFRET-P 76 (589)
Q Consensus 3 ~~~i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~---~~e~~~~lI~--a~ln~~D~~~G~T-P 76 (589)
+..-..+..|.||||+||..|+.+++++||++|++++..+..+.++++.+ ..+.+..++. ++++.+|. .|+| |
T Consensus 3 p~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~-~g~ttp 81 (156)
T 1bi7_B 3 PAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADP-ATLTRP 81 (156)
T ss_dssp -------CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCT-TTCCCH
T ss_pred CCccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHH
Confidence 33334678999999999999999999999999999998887666666554 4455666666 67888997 8999 9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHH
Q 007790 77 LHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVIS 146 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA 146 (589)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.+|...+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999998887643
No 7
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=5.2e-21 Score=178.63 Aligned_cols=148 Identities=18% Similarity=0.087 Sum_probs=126.6
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHH
Q 007790 4 PAIKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPL 77 (589)
Q Consensus 4 ~~i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPL 77 (589)
+.......+.+|||+||..|+.+++++|+++|++++..+..+.++++.+ ..+.+..++. ++++..|. .|+|||
T Consensus 6 ~~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L 84 (169)
T 2y1l_E 6 HHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPL 84 (169)
T ss_dssp -------CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHH
T ss_pred ccccCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHH
Confidence 3445677889999999999999999999999999998886666666554 4555666666 56788887 999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 78 HLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 78 HlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999865433
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.85 E-value=7.2e-21 Score=176.60 Aligned_cols=143 Identities=17% Similarity=0.037 Sum_probs=127.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcC
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g 84 (589)
.|.||||+||..|+.++++.|++.|++++..+..+.++++.+ ..+.+..++. +.++..|. .|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC
Confidence 588999999999999999999999999998887666666554 4455666666 57788887 9999999999999
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccch
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~Df 154 (589)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987655443
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=6.9e-21 Score=189.89 Aligned_cols=141 Identities=25% Similarity=0.308 Sum_probs=118.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH---------------------
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--------------------- 62 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--------------------- 62 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.+.. +.+..++.
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 120 (282)
T 1oy3_D 41 QNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120 (282)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccC
Confidence 57889999999999999999999999999998888766666665543 34444443
Q ss_pred ----------------------------hhcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC-CCCCHHHHH
Q 007790 63 ----------------------------SVLDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNA-AGWNPLQEA 113 (589)
Q Consensus 63 ----------------------------a~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~-~G~TPLh~A 113 (589)
..++.+|. .|.||||+||..|+.+++++|+++|++++..+. .|+||||+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A 199 (282)
T 1oy3_D 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLA 199 (282)
T ss_dssp -----------------------CCCGGGGTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred cchhcchhhhccccccchhhhhhhhhhhhcCCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHH
Confidence 13667776 899999999999999999999999999999885 499999999
Q ss_pred HHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 114 VCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 114 ~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 200 ~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTS
T ss_pred HHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHc
Confidence 999999999999999999999999999999998754
No 10
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=1.3e-20 Score=169.81 Aligned_cols=123 Identities=19% Similarity=0.046 Sum_probs=104.6
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhh---hhHHHHHHHHH--hhcCCCCCCC-CCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDS---LSQERVADQIA--SVLDRRDVPF-RETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~---~~~e~~~~lI~--a~ln~~D~~~-G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++. ...+.+..++. ++++.+|. . |+||||+|+
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~-~~g~t~L~~A~ 86 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAELLLLHGAEPNCADP-ATLTRPVHDAA 86 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTTSCHHHHHHHHHHTCCSSCCBT-TTTBCHHHHHH
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCCHHHHHH
Confidence 68899999999999999999999999999998877544444444 44555666666 67788887 7 899999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR 131 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~ 131 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 87 REGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999988874
No 11
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.84 E-value=1.1e-20 Score=179.97 Aligned_cols=145 Identities=17% Similarity=0.169 Sum_probs=128.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH---hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA---SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~---a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.+ ..+.+..++. ..++..|. .|.||||+|
T Consensus 35 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A 113 (201)
T 3hra_A 35 VDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNALIPA 113 (201)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHHHHH
Confidence 678999999999999999999999999999998886666666554 4555666664 47788887 999999999
Q ss_pred HHcCCHHHHHHHHHCC-CCCCcccCCCCCHHHHHHHcCC-----HHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 81 VRLNDAFAARSLASAG-ADVSLQNAAGWNPLQEAVCRRN-----SDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 81 v~~g~~e~vklLL~~G-ADvn~~d~~G~TPLh~A~~~G~-----~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++..+..|.||+++|+.....+
T Consensus 114 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 192 (201)
T 3hra_A 114 AEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTE 192 (201)
T ss_dssp HHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHh
Confidence 9999999999999999 9999999999999999999998 99999999999999999999999999998764443
No 12
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=5.2e-21 Score=172.27 Aligned_cols=119 Identities=18% Similarity=0.124 Sum_probs=110.1
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDA 86 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~ 86 (589)
.+|..|.||||+||..|+.+++++||+.|+++ +.+|. .|+||||+||..|+.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------------------------~~~~~-~g~t~L~~A~~~~~~ 56 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP---------------------------NVKDH-AGWTPLHEACNHGHL 56 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS---------------------------CCCCT-TSCCHHHHHHHTTCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------------------CcCCC-CCCCHHHHHHHcCCH
Confidence 68999999999999999999999999999887 44555 899999999999999
Q ss_pred HHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 87 FAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 87 e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+
T Consensus 57 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 123 (137)
T 3c5r_A 57 KVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKS 123 (137)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHH
T ss_pred HHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999986544433
No 13
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.84 E-value=1.4e-20 Score=172.57 Aligned_cols=139 Identities=15% Similarity=0.069 Sum_probs=120.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccch----hhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcCC
Q 007790 12 SHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTE----SDSLSQERVADQIA--SVLDRRDVPFRETPLHLAVRLND 85 (589)
Q Consensus 12 G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tA----l~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~ 85 (589)
..||||.||..|+.+++++|++.|++++ .+..+.++ +.....+.+..++. +.++.+|. .|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCh
Confidence 4589999999999999999999999875 34444444 44455556666666 56788887 89999999999999
Q ss_pred HHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 86 AFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 86 ~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999865443
No 14
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=7.1e-21 Score=197.62 Aligned_cols=139 Identities=14% Similarity=0.054 Sum_probs=125.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHH-------HHHHHHH---hhcCCCCCCCCCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQE-------RVADQIA---SVLDRRDVPFRETPL 77 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e-------~~~~lI~---a~ln~~D~~~G~TPL 77 (589)
.|..|.||||+||..|+.++|++||++|++++..+..+.||++.++.. .+..++. +.++.+|. .|+|||
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~-~g~tpL 205 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS-MNRTIL 205 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT-TCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC-CCCCHH
Confidence 588999999999999999999999999999999998899999887763 2345554 56889998 999999
Q ss_pred HHHHH----cCCHHHHHHHHHCCC---------------------------------------------CCCcccCCCCC
Q 007790 78 HLAVR----LNDAFAARSLASAGA---------------------------------------------DVSLQNAAGWN 108 (589)
Q Consensus 78 HlAv~----~g~~e~vklLL~~GA---------------------------------------------Dvn~~d~~G~T 108 (589)
|+|+. .|+.+++++|++.++ +++.+|..|+|
T Consensus 206 h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~T 285 (327)
T 1sw6_A 206 HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT 285 (327)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCC
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCC
Confidence 99999 899999999998743 68888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHH
Q 007790 109 PLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISV 147 (589)
Q Consensus 109 PLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~ 147 (589)
|||+|+..|+.++|++|+++|++++..+..|.||+++|+
T Consensus 286 pLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 286 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324 (327)
T ss_dssp HHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999885
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=1.3e-20 Score=187.27 Aligned_cols=143 Identities=22% Similarity=0.173 Sum_probs=112.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH---hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA---SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~---a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.+. .+.+..++. ..++.+|. .|.||||+|
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A 131 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILA 131 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-TCCCHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHHH
Confidence 5788999999999999999999999999999888866666665554 344555555 25677776 788888888
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 132 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 132 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp HHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCC
Confidence 88888888888888888888888888888888888888888888888888887777788888887776533
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=1.6e-20 Score=186.76 Aligned_cols=151 Identities=23% Similarity=0.230 Sum_probs=133.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLP-RLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Ga-din~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+||..|+.+++++|+++|+ +++..+..+.++++.+.. +.+..++. ++++.+|. .|+||||+|
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A 164 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWA 164 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC-CCCCHHHHH
Confidence 57899999999999999999999999997 888877777777666544 45666666 67888997 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccchhhccc
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRDFYMEIS 159 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~Df~~el~ 159 (589)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+....+.
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998877666654443
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.83 E-value=1.3e-20 Score=182.71 Aligned_cols=145 Identities=19% Similarity=0.176 Sum_probs=117.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCC--CCC-CCCCccchhhh----hhHHHHHHHHH----hhcCCCCCCCCCCH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPR--LAA-DPSKIHTESDS----LSQERVADQIA----SVLDRRDVPFRETP 76 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gad--in~-~~~~l~tAl~~----~~~e~~~~lI~----a~ln~~D~~~G~TP 76 (589)
.|..|.||||+||..|+.+++++|+++|++ ++. .+..+.++++. ...+.+..++. ..++..|. .|.||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~t~ 110 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGVTC 110 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-TCCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-CCCCH
Confidence 688899999999999999999999999944 433 44444455544 44555666665 45677776 89999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc-CchhHHhhcCCchhHHHHHhhccc
Q 007790 77 LHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH-HRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g-a~~~~~~~~g~tPlllA~l~~~~D 153 (589)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++..+..|.||+++|+.....+
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999998 888888889999999888764443
No 18
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.83 E-value=5.4e-21 Score=187.41 Aligned_cols=141 Identities=21% Similarity=0.183 Sum_probs=125.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHHhh--------cCCCCCCCCCC
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIASV--------LDRRDVPFRET 75 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~a~--------ln~~D~~~G~T 75 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.++. +.+..++... ++..|. .|.|
T Consensus 41 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-~g~t 119 (236)
T 1ikn_D 41 QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY-NGHT 119 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT-TCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC-CCCC
Confidence 67889999999999999999999999999999888777777666554 4455565522 567786 8999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccC-CCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 76 PLHLAVRLNDAFAARSLASAGADVSLQNA-AGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 76 PLHlAv~~g~~e~vklLL~~GADvn~~d~-~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
|||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 99999999999999999999999999998 999999999999999999999999999999999999999998654
No 19
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.83 E-value=1.8e-20 Score=174.76 Aligned_cols=142 Identities=16% Similarity=0.021 Sum_probs=103.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCccchhh----hhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcC
Q 007790 12 SHSPVHYAIVLGDHTTLTRIISTLPR-LAADPSKIHTESD----SLSQERVADQIA--SVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 12 G~TPLH~Aa~~G~~e~vk~LL~~Gad-in~~~~~l~tAl~----~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g 84 (589)
+.||||+||..|+.++++.||+.|.. ++..+..+.++++ ....+.+..++. ++++..|. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC
Confidence 45777888888888877777777765 5555544444443 344445555555 46677776 7888888888888
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccch
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~Df 154 (589)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHH
Confidence 8888888888888888888888888888888888888888888888888777888888888877654443
No 20
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=5.5e-20 Score=177.84 Aligned_cols=142 Identities=22% Similarity=0.182 Sum_probs=127.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH---hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA---SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~---a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.+ ..+.+..++. ..++..|. .|.||||+|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A 99 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILA 99 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT-TCCCHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCcHHHHH
Confidence 488999999999999999999999999999998886666666554 4555666666 26788887 899999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhh
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRR 150 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~ 150 (589)
+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 100 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 169 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred HHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998654
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.83 E-value=2.4e-20 Score=171.72 Aligned_cols=142 Identities=17% Similarity=0.094 Sum_probs=124.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh---HHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcC
Q 007790 10 DYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS---QERVADQIA--SVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 10 ~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~---~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g 84 (589)
+...||||+||..|+.++++.||++|++++..+..+.++++.+. .+.+..++. ++++.+|. .|+||||+|+..|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDR-TGFAVIHDAARAG 81 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCSSCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHcCcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcC
Confidence 34679999999999999999999999999988877777776554 455566666 57788887 9999999999999
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc-hhHHhhcCCchhHHHHHhhcc
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR-SAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~-~~~~~~~g~tPlllA~l~~~~ 152 (589)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++..+..|.||+++|+.....
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~ 150 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN 150 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999987 588889999999999865443
No 22
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=1.5e-20 Score=166.33 Aligned_cols=112 Identities=16% Similarity=0.093 Sum_probs=102.6
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
.+..|.||||+||..|+.++++.|++.|+++ +.+|. .|+||||+||..|+.+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~---------------------------~~~~~-~g~t~L~~A~~~~~~~ 54 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV---------------------------NRTLE-GGRKPLHYAADCGQLE 54 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCT---------------------------TSCCT-TSSCHHHHHHHTTCHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCc---------------------------CccCC-CCCcHHHHHHHcCCHH
Confidence 3567899999999999999999999999877 44555 8999999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHH
Q 007790 88 AARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISV 147 (589)
Q Consensus 88 ~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~ 147 (589)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 55 ~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 55 ILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999884
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=5.8e-20 Score=178.66 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=126.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. +.++.+|. .|.||||+|+
T Consensus 36 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 114 (231)
T 3aji_A 36 TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ-NGCTPLHYAA 114 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 5889999999999999999999999999999888866666665554 455566665 57788887 8999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhh
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRR 150 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~ 150 (589)
..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 115 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 183 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183 (231)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCC
Confidence 999999999999999999999999999999999999999999999999999999999999999997654
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=3.9e-20 Score=179.84 Aligned_cols=140 Identities=17% Similarity=0.148 Sum_probs=126.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. +.++..|. .|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 147 (231)
T 3aji_A 69 KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-YDATAMHRAA 147 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHH
Confidence 6789999999999999999999999999999988877767666554 455566666 56788887 8999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHH
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVL 148 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l 148 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|..
T Consensus 148 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 148 AKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred HcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999998854
No 25
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=6.8e-20 Score=177.18 Aligned_cols=145 Identities=23% Similarity=0.238 Sum_probs=128.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLP-RLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Ga-din~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+|+..|+.+++++|++.++ +++..+..+.++++.+ ..+.+..++. +.++..|. .|+||||+|
T Consensus 54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A 132 (223)
T 2f8y_A 54 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWA 132 (223)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHHHHH
Confidence 67899999999999999999999999997 7777776666666554 4455666666 57788887 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 133 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998764443
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=4.9e-20 Score=179.58 Aligned_cols=142 Identities=20% Similarity=0.145 Sum_probs=123.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCccchhhhhh----HHHHHHHHH--hhc-----CCCCCCCCCCHHH
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIIST-LPRLAADPSKIHTESDSLS----QERVADQIA--SVL-----DRRDVPFRETPLH 78 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~-Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~l-----n~~D~~~G~TPLH 78 (589)
.|.||||+||..|+.++++.||+. |++++..+..+.++++.++ .+.+..++. ..+ +..|. .|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHH
Confidence 589999999999999999999998 9999998877766666554 455666666 333 56676 8999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCcccC-------------CCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHH
Q 007790 79 LAVRLNDAFAARSLASAGADVSLQNA-------------AGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVI 145 (589)
Q Consensus 79 lAv~~g~~e~vklLL~~GADvn~~d~-------------~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlll 145 (589)
+||..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++..+..|.||+++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999876 79999999999999999999999999999999999999999
Q ss_pred HHHhhccc
Q 007790 146 SVLRRMRD 153 (589)
Q Consensus 146 A~l~~~~D 153 (589)
|+.....+
T Consensus 161 A~~~~~~~ 168 (232)
T 2rfa_A 161 LILQPNKT 168 (232)
T ss_dssp HHTCSCHH
T ss_pred HHHcCChH
Confidence 98654433
No 27
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=6e-20 Score=154.86 Aligned_cols=93 Identities=26% Similarity=0.360 Sum_probs=86.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHHHHH
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAFAAR 90 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e~vk 90 (589)
+|+||||+||..|+.+++++|++.|+++ +.+|. .|+||||+|+..|+.++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------------------n~~d~-~g~t~L~~A~~~~~~~~v~ 52 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV---------------------------NAKDK-NGRTPLHLAARNGHLEVVK 52 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT---------------------------TCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC---------------------------cccCC-CCCCHHHHHHHcCCHHHHH
Confidence 4899999999999999999999999887 44555 8999999999999999999
Q ss_pred HHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc
Q 007790 91 SLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR 131 (589)
Q Consensus 91 lLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~ 131 (589)
+|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 53 ~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 53 LLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999874
No 28
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.82 E-value=2.5e-20 Score=167.99 Aligned_cols=118 Identities=21% Similarity=0.156 Sum_probs=97.2
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCC
Q 007790 6 IKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLND 85 (589)
Q Consensus 6 i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~ 85 (589)
......|.||||+||..|+.+++++||++|++++ .+|. .|+||||+||..|+
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~---------------------------~~~~-~g~t~L~~A~~~~~ 59 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADVN---------------------------AKDE-YGLTPLYLATAHGH 59 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT---------------------------CCCT-TSCCHHHHHHHHTC
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCCC---------------------------CcCC-CCCCHHHHHHHcCC
Confidence 3456788999999999999999999999998874 4444 78888888888888
Q ss_pred HHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 86 AFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 86 ~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 60 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~ 125 (136)
T 2jab_A 60 LEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN 125 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC
Confidence 888888888888888888888888888888888888888888888888888888888888876543
No 29
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=1.9e-20 Score=185.84 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=125.2
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCC---------------CCCccchhhhhhHHHHHHHHH--hhcCC
Q 007790 8 PEDYSHSPVHYAIVL---GDHTTLTRIISTLPRLAAD---------------PSKIHTESDSLSQERVADQIA--SVLDR 67 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~---G~~e~vk~LL~~Gadin~~---------------~~~l~tAl~~~~~e~~~~lI~--a~ln~ 67 (589)
.|..|.||||+||.. |+.+++++||++|++++.. .+++|.|+.....+.+..++. ++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 588999999999999 9999999999999887522 234555555556667777777 56777
Q ss_pred CCCCC-------------CCCHHHHHHHcCCHHHHHHHHH---CCCCCCcccCCCCCHHHHHHH--cCCHH-------HH
Q 007790 68 RDVPF-------------RETPLHLAVRLNDAFAARSLAS---AGADVSLQNAAGWNPLQEAVC--RRNSD-------IA 122 (589)
Q Consensus 68 ~D~~~-------------G~TPLHlAv~~g~~e~vklLL~---~GADvn~~d~~G~TPLh~A~~--~G~~e-------iv 122 (589)
+|. . |+||||+||..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++
T Consensus 119 ~~~-~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv 197 (256)
T 2etb_A 119 RAC-GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY 197 (256)
T ss_dssp CCC-SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred ccc-cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHH
Confidence 775 5 9999999999999999999999 999999999999999999998 88888 99
Q ss_pred HHHHHhcCch-------hHHhhcCCchhHHHHHhhccch
Q 007790 123 LILLKLHHRS-------AWAKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 123 ~lLL~~ga~~-------~~~~~~g~tPlllA~l~~~~Df 154 (589)
++|+++|+++ +..+..|.||+++|+.....+.
T Consensus 198 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 9999999999 8889999999999987654433
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=6.1e-20 Score=177.87 Aligned_cols=136 Identities=16% Similarity=0.164 Sum_probs=61.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCccchhh----hhhHHHHHHHHHhh--c--CC-CCCCCCCCHHHHHH
Q 007790 12 SHSPVHYAIVLGDHTTLTRIISTLPRLAA-DPSKIHTESD----SLSQERVADQIASV--L--DR-RDVPFRETPLHLAV 81 (589)
Q Consensus 12 G~TPLH~Aa~~G~~e~vk~LL~~Gadin~-~~~~l~tAl~----~~~~e~~~~lI~a~--l--n~-~D~~~G~TPLHlAv 81 (589)
|.||||+||..|+.++++.||+.|+++.. .+..+.++++ ....+.+..++... + +. .|. .|+||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD-SGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT-TSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC-CCCCHHHHHH
Confidence 34555555555555555555555444322 2222222222 22233333333311 1 11 333 4555555555
Q ss_pred HcCCHHHHHHHHHCC--CCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHH
Q 007790 82 RLNDAFAARSLASAG--ADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVL 148 (589)
Q Consensus 82 ~~g~~e~vklLL~~G--ADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l 148 (589)
..|+.+++++|+++| ++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAAS 149 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 555555555555554 4444555555555555555555555555555555554444455555554443
No 31
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=5.5e-20 Score=171.42 Aligned_cols=134 Identities=18% Similarity=0.199 Sum_probs=114.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.+. .+.+..++. +.++.+|. .|+||||+|+
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 110 (172)
T 3v30_A 32 PDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLLYAV 110 (172)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 5889999999999999999999999999999988876666665554 455566665 67888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCch
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLP 142 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tP 142 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++....+..+.+|
T Consensus 111 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 111 RGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999999999999999999998887777777666
No 32
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=3.9e-20 Score=186.92 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=73.6
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHH
Q 007790 72 FRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISV 147 (589)
Q Consensus 72 ~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~ 147 (589)
.|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999884
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=8e-20 Score=178.04 Aligned_cols=147 Identities=17% Similarity=0.181 Sum_probs=122.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-----CCCCCCccchh----hhhhHHHHHHHHH--hhcCCCCC------
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRL-----AADPSKIHTES----DSLSQERVADQIA--SVLDRRDV------ 70 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadi-----n~~~~~l~tAl----~~~~~e~~~~lI~--a~ln~~D~------ 70 (589)
.|..|+||||+||..|+.+++++||++|+++ +..+..+.+++ .....+.+..++. ++++.++.
T Consensus 33 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 33 RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 6889999999999999999999999999886 44444455555 4455566777776 44555432
Q ss_pred ------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHH----HHHHHhcCch------hH
Q 007790 71 ------PFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIA----LILLKLHHRS------AW 134 (589)
Q Consensus 71 ------~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv----~lLL~~ga~~------~~ 134 (589)
..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..|+.+++ ++|+++|++. +.
T Consensus 113 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~ 192 (232)
T 2rfa_A 113 RPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELV 192 (232)
T ss_dssp CTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGC
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhcc
Confidence 1599999999999999999999999999999999999999999999999988 9999999877 57
Q ss_pred HhhcCCchhHHHHHhhccch
Q 007790 135 AKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 135 ~~~~g~tPlllA~l~~~~Df 154 (589)
.+..|.||+++|+.....+.
T Consensus 193 ~~~~g~tpl~~A~~~g~~~~ 212 (232)
T 2rfa_A 193 PNNQGLTPFKLAGVEGNIVM 212 (232)
T ss_dssp CCTTSCCHHHHHHHHTCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHH
Confidence 78899999999987654443
No 34
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.82 E-value=1.4e-19 Score=176.58 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=112.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHHh------hcCCCCCCCCCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIAS------VLDRRDVPFRETPL 77 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~a------~ln~~D~~~G~TPL 77 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+ ..+.+..++.. .++..|. .|.|||
T Consensus 42 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~L 120 (241)
T 1k1a_A 42 YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY-DGLTAL 120 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-TSCCHH
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc-CCCcHH
Confidence 567788888888888888888888888888877776655555544 34445555552 5677776 788888
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCccc-CCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhh
Q 007790 78 HLAVRLNDAFAARSLASAGADVSLQN-AAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRR 150 (589)
Q Consensus 78 HlAv~~g~~e~vklLL~~GADvn~~d-~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~ 150 (589)
|+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 121 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 121 HVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 88888888888888888888888887 68888888888888888888888888888888888888888887653
No 35
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.81 E-value=2.1e-19 Score=157.36 Aligned_cols=120 Identities=23% Similarity=0.268 Sum_probs=81.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcC
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g 84 (589)
+|.||||+||..|+.+++++|+++|++++..+..+.++++.+ ..+.+..++. ..++.+|. .|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcC
Confidence 589999999999999999999999999876664444444333 2333444444 34555555 6666666666666
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR 131 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~ 131 (589)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 66666666666666666666666666666666666666666666653
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=6.9e-20 Score=178.70 Aligned_cols=147 Identities=22% Similarity=0.193 Sum_probs=127.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLP----RLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPL 77 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Ga----din~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPL 77 (589)
.|..|.||||+||..|+.+++++|+++|+ +++..+..+.++++.+. .+.+..++. ..++..|...|.|||
T Consensus 75 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L 154 (241)
T 1k1a_A 75 LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL 154 (241)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHH
Confidence 57899999999999999999999999998 77777766666665544 555666666 566777722799999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccch
Q 007790 78 HLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 78 HlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~Df 154 (589)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+.
T Consensus 155 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 155 IHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999866544443
No 37
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=7.1e-20 Score=167.71 Aligned_cols=139 Identities=19% Similarity=0.150 Sum_probs=122.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCccchhhh---hhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcCC
Q 007790 12 SHSPVHYAIVLGDHTTLTRIIST-LPRLAADPSKIHTESDS---LSQERVADQIA--SVLDRRDVPFRETPLHLAVRLND 85 (589)
Q Consensus 12 G~TPLH~Aa~~G~~e~vk~LL~~-Gadin~~~~~l~tAl~~---~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~ 85 (589)
|.||||+||..|+.++++.||+. +.+++..+..+.++++. ...+.+..++. ++++.+|. .|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCc
Confidence 56899999999999999999998 34788888777777766 33445566666 57888897 99999999999999
Q ss_pred HHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 86 AFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 86 ~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..+..|.||+++|+.....
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcH
Confidence 9999999999999999999999999999999999999999999 99999999999999999865443
No 38
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.81 E-value=4.4e-20 Score=170.94 Aligned_cols=140 Identities=17% Similarity=0.147 Sum_probs=118.8
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCC----ccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTL-PRLAADPSK----IHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHL 79 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~G-adin~~~~~----l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHl 79 (589)
..|..|.||||.||..|+.++++.|++.+ .+++..+.. +|.|+.....+.+..++. ++++.+|. .|+||||+
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 81 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHN 81 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHH
Confidence 35778899999999999999999999844 455554544 444445555566677776 57788897 99999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHH
Q 007790 80 AVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISV 147 (589)
Q Consensus 80 Av~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~ 147 (589)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSC
T ss_pred HHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999864
No 39
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=7.8e-20 Score=182.79 Aligned_cols=142 Identities=15% Similarity=0.067 Sum_probs=122.6
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+.. +.+..++. +.++.. . .|.||||+|+
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~-~g~t~L~~A~ 109 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-S-DLASPIHEAA 109 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-C-TTCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-C-CCCCHHHHHH
Confidence 67899999999999999999999999999999888777777766544 45566666 344433 3 6999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||+++|+.....
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 110 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASE 179 (261)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCH
T ss_pred HcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999885 77899999999876433
No 40
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=9.2e-20 Score=171.51 Aligned_cols=139 Identities=15% Similarity=0.053 Sum_probs=118.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHHH
Q 007790 10 DYSHSPVHYAIVLGDHTTLTRIIST-LPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAVR 82 (589)
Q Consensus 10 ~~G~TPLH~Aa~~G~~e~vk~LL~~-Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~ 82 (589)
..+.++||.||..|+.++++.||+. +.+++..+..+.++++.+ ..+.+..++. ++++.+|. .|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 4678999999999999999999988 566777776666666554 4455666666 57788887 99999999999
Q ss_pred cCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 83 LNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 83 ~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|...
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988654
No 41
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.81 E-value=8.4e-20 Score=178.22 Aligned_cols=145 Identities=17% Similarity=0.069 Sum_probs=122.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH---hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA---SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~---a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+|+..|+.+++++|+++|++++..+..+.++++.+ ..+.+..++. ..++..|. .|.||||+|
T Consensus 40 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A 118 (237)
T 3b7b_A 40 CSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPMIWA 118 (237)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHHHHH
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCCHHHHH
Confidence 577899999999999999999999999999888776666665554 4455556665 45677776 899999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 119 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 191 (237)
T 3b7b_A 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYD 191 (237)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHh
Confidence 9999999999999999999999999999999999999999999999999999888888999999988764433
No 42
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=9.5e-20 Score=181.61 Aligned_cols=142 Identities=18% Similarity=0.153 Sum_probs=124.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPR---LAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLH 78 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gad---in~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLH 78 (589)
+|..|+||||+||..|+.+++++||++|++ ++..+..+.++++.++ .+.+..++. +.++.+|. .|+||||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~ 83 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-GGHTALH 83 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 689999999999999999999999999998 6777766666665554 455666666 67888897 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCC-----------------------------------------------CCcccCCCCCHHH
Q 007790 79 LAVRLNDAFAARSLASAGAD-----------------------------------------------VSLQNAAGWNPLQ 111 (589)
Q Consensus 79 lAv~~g~~e~vklLL~~GAD-----------------------------------------------vn~~d~~G~TPLh 111 (589)
+|+..|+.+++++|+++|++ ++.+|..|+||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 99999999999999998865 7778899999999
Q ss_pred HHHHcCCHHHHHHHHHhcCchhHHhh-cCCchhHHHHHhh
Q 007790 112 EAVCRRNSDIALILLKLHHRSAWAKW-RRRLPRVISVLRR 150 (589)
Q Consensus 112 ~A~~~G~~eiv~lLL~~ga~~~~~~~-~g~tPlllA~l~~ 150 (589)
+|+..|+.+++++|+++|++++..+. .|.||+++|+...
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 99999999999999999999988775 4999999998653
No 43
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=2.5e-19 Score=179.15 Aligned_cols=139 Identities=17% Similarity=0.082 Sum_probs=122.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHHHHHcC
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g 84 (589)
.|+||||+||..|+.++++.|+++|++++..+..+.++++.++. +.+..++. ++++.+|. .|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 58999999999999999999999999999988777777766554 55566666 67888897 9999999999999
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
+.+++++|+++|++++. +..|+||||+|+..|+.+++++|+++|++++..+..|.||++.|+....
T Consensus 81 ~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp CHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC
Confidence 99999999999999986 4569999999999999999999999999999999999999999987643
No 44
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.81 E-value=2.4e-19 Score=174.98 Aligned_cols=144 Identities=20% Similarity=0.203 Sum_probs=128.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+ ..+.+..++. +.++.+|. .|.||||+|+
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 85 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLHLAA 85 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHH
Confidence 678999999999999999999999999999998886666666554 4555666666 56778887 8999999999
Q ss_pred HcCCHHHHHHHHHCC-CCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 82 RLNDAFAARSLASAG-ADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 82 ~~g~~e~vklLL~~G-ADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
..|+.+++++|+++| ++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 999999999999999 89999999999999999999999999999999999999999999999999876433
No 45
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.80 E-value=2.1e-20 Score=184.97 Aligned_cols=137 Identities=17% Similarity=0.078 Sum_probs=89.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC---CCccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHc
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADP---SKIHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHLAVRL 83 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~---~~l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~ 83 (589)
+..|.||||.|+..|+.++++.||++|++++... ++++.|+.....+.+..++. ++++.+|. .|+||||+||..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 5679999999999999999999999999997653 23444444555556666665 57888997 999999999999
Q ss_pred CCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCC-chhHHH
Q 007790 84 NDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRR-LPRVIS 146 (589)
Q Consensus 84 g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~-tPlllA 146 (589)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||++++
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 999999999999999999999999999999999999999999999999998887777 999977
No 46
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=8.5e-20 Score=159.34 Aligned_cols=110 Identities=22% Similarity=0.261 Sum_probs=100.2
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCC
Q 007790 6 IKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLND 85 (589)
Q Consensus 6 i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~ 85 (589)
...|.+|.||||+||..|+.+++++||++|+++ +.+|. .|+||||+||..|+
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------------------------~~~d~-~g~t~L~~A~~~~~ 54 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV---------------------------NARSK-DGNTPLHLAAKNGH 54 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS---------------------------SCCCS-SSCCTTHHHHTTTC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------------------CCcCC-CCCCHHHHHHHcCc
Confidence 457999999999999999999999999999877 44555 89999999999999
Q ss_pred HHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchh
Q 007790 86 AFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPR 143 (589)
Q Consensus 86 ~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPl 143 (589)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+|.
T Consensus 55 ~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 55 AEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999999999999999999999999999988887764
No 47
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=2.8e-19 Score=183.24 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=41.4
Q ss_pred cCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhH
Q 007790 65 LDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRV 144 (589)
Q Consensus 65 ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPll 144 (589)
++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||++
T Consensus 240 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~ 318 (351)
T 3utm_A 240 VNEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQ 318 (351)
T ss_dssp TTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhh
Confidence 344443 4555555555555555555555555555555555555555555555555555555555555555555555554
Q ss_pred HH
Q 007790 145 IS 146 (589)
Q Consensus 145 lA 146 (589)
++
T Consensus 319 ~a 320 (351)
T 3utm_A 319 MG 320 (351)
T ss_dssp HS
T ss_pred hh
Confidence 44
No 48
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=2.2e-19 Score=187.54 Aligned_cols=143 Identities=17% Similarity=0.129 Sum_probs=97.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCccchhhhhhHHHHHHHHHh------hcC-------------
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADP--SKIHTESDSLSQERVADQIAS------VLD------------- 66 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~--~~l~tAl~~~~~e~~~~lI~a------~ln------------- 66 (589)
.|..|.||||+||..|+.+++++||++|++++..+ ++++.|+.....+.+..++.. .++
T Consensus 49 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 128 (364)
T 3ljn_A 49 QNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNE 128 (364)
T ss_dssp CCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEE
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhh
Confidence 45566666666666666666666666666543311 233333333333344444331 111
Q ss_pred ----CCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc-----hhHH
Q 007790 67 ----RRDVPFRETPLHLAVRLN--DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR-----SAWA 135 (589)
Q Consensus 67 ----~~D~~~G~TPLHlAv~~g--~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~-----~~~~ 135 (589)
..|. .|.||||+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++..
T Consensus 129 ~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 207 (364)
T 3ljn_A 129 IGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYA 207 (364)
T ss_dssp ETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCC
T ss_pred hccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccccc
Confidence 1555 7888888888888 88888888888888888888888888888888888888888888877 7777
Q ss_pred hhcCCchhHHHHHhhc
Q 007790 136 KWRRRLPRVISVLRRM 151 (589)
Q Consensus 136 ~~~g~tPlllA~l~~~ 151 (589)
+..|.||+++|+....
T Consensus 208 ~~~g~t~L~~A~~~g~ 223 (364)
T 3ljn_A 208 NKQGNSHLHWAILINW 223 (364)
T ss_dssp CTTCCCTTHHHHTTTC
T ss_pred CCCCCcHHHHHHHcCC
Confidence 8888888888876633
No 49
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=3.2e-19 Score=181.27 Aligned_cols=143 Identities=15% Similarity=0.081 Sum_probs=121.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. +.++..+ .|.||||+|+
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~ 165 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIHEAA 165 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHHHHH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHHHHH
Confidence 5789999999999999999999999999999988877777766554 445556665 3444333 5999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||+++|+.....+
T Consensus 166 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~ 236 (285)
T 3d9h_A 166 RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEE 236 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999884 778999999998764433
No 50
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=4.6e-19 Score=180.04 Aligned_cols=143 Identities=16% Similarity=0.070 Sum_probs=126.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
..|..|+||||+||..|+.+++++||+.|++++..+..+.++++.++ .+.+..++. ++++.+|. .|+||||+|
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A 132 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNA 132 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHH
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHHH
Confidence 47889999999999999999999999999999988876666666554 455666666 67888897 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
+..|+.+++++|+++|++++..+ .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999999999999998654 59999999999999999999999999999999999999999986543
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.79 E-value=1.4e-19 Score=179.55 Aligned_cols=146 Identities=16% Similarity=0.153 Sum_probs=121.0
Q ss_pred CCCCCChHHHHHH---HcCCHHHHHHHHHcCCCC-----------CCCC----CCccchhhhhhHHHHHHHHH--hhcCC
Q 007790 8 PEDYSHSPVHYAI---VLGDHTTLTRIISTLPRL-----------AADP----SKIHTESDSLSQERVADQIA--SVLDR 67 (589)
Q Consensus 8 ~D~~G~TPLH~Aa---~~G~~e~vk~LL~~Gadi-----------n~~~----~~l~tAl~~~~~e~~~~lI~--a~ln~ 67 (589)
.|..|.||||+|+ ..|+.+++++||+.|++. +..+ +++|.|+.....+.+..++. ++++.
T Consensus 42 ~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 42 EPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA 121 (260)
T ss_dssp CTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc
Confidence 4578999999999 669999999999988552 2222 34555555556666777777 56777
Q ss_pred CC--------------CCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCcccCCCCCHHHHHHHcCC---------HHH
Q 007790 68 RD--------------VPFRETPLHLAVRLNDAFAARSLAS---AGADVSLQNAAGWNPLQEAVCRRN---------SDI 121 (589)
Q Consensus 68 ~D--------------~~~G~TPLHlAv~~g~~e~vklLL~---~GADvn~~d~~G~TPLh~A~~~G~---------~ei 121 (589)
+| . .|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .++
T Consensus 122 ~~~~~~~~~~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~ 200 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFY-FGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKM 200 (260)
T ss_dssp CCEECCCSSSCCCCSCC-SCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHH
T ss_pred cccccccCccccccccc-CCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHH
Confidence 77 4 79999999999999999999999 999999999999999999999888 799
Q ss_pred HHHHHHhcCch-------hHHhhcCCchhHHHHHhhccch
Q 007790 122 ALILLKLHHRS-------AWAKWRRRLPRVISVLRRMRDF 154 (589)
Q Consensus 122 v~lLL~~ga~~-------~~~~~~g~tPlllA~l~~~~Df 154 (589)
+++|+++|+++ +..+..|.||+++|+.....+.
T Consensus 201 v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 201 YDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 99999999988 6788999999999987654433
No 52
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=3.8e-19 Score=190.04 Aligned_cols=141 Identities=21% Similarity=0.197 Sum_probs=89.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+|+..|+.+++++|+++|++++..+..+.++++.++. +.+..++. +.++.+|. .|+||||+|+
T Consensus 241 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 319 (437)
T 1n11_A 241 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHVAS 319 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS-SCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC-CCCCHHHHHH
Confidence 34556666666666666666666666666666555555454444333 23333443 45566665 6777777777
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||+++|...
T Consensus 320 ~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 320 HYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp HSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred HcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 77777777777777777777777777777777777777777777777777666666677777666543
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.79 E-value=4.2e-19 Score=163.31 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=107.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+|+. |+.+++++|+++|++++..+..+.++++.+. .+.+..++. ++++.+|. .|+||||+|+
T Consensus 34 ~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 111 (162)
T 1ihb_A 34 QNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLHLAA 111 (162)
T ss_dssp CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHH
Confidence 57899999999999 9999999999999999988876666666554 455666666 67788897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCC-CCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc
Q 007790 82 RLNDAFAARSLASAGAD-VSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR 131 (589)
Q Consensus 82 ~~g~~e~vklLL~~GAD-vn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~ 131 (589)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 112 ~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 112 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999998 699999999999999999999999999999975
No 54
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.79 E-value=7.2e-19 Score=163.05 Aligned_cols=124 Identities=15% Similarity=0.169 Sum_probs=110.6
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. ++++.+|. .|+||||+|+
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 110 (167)
T 3v31_A 32 TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLLYAV 110 (167)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHHHHH
Confidence 6889999999999999999999999999999988866666665544 455566666 67888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCch
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRS 132 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~ 132 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++.+.
T Consensus 111 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 111 HGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987554
No 55
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.79 E-value=1.1e-18 Score=159.82 Aligned_cols=120 Identities=22% Similarity=0.209 Sum_probs=107.1
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHH
Q 007790 5 AIKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLH 78 (589)
Q Consensus 5 ~i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLH 78 (589)
.+..|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. ++++.+|. .|+||||
T Consensus 27 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 105 (153)
T 1awc_B 27 PFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALH 105 (153)
T ss_dssp CCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 4457889999999999999999999999999999988877777766554 445566665 57888897 9999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q 007790 79 LAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALIL 125 (589)
Q Consensus 79 lAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lL 125 (589)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 106 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 106 WATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999987
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=3.2e-19 Score=176.88 Aligned_cols=137 Identities=17% Similarity=0.114 Sum_probs=118.5
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHHcCCCCCC----CCCCccchhhhhhH-------HHHHHHHH--hhcC-------
Q 007790 11 YSHSPVHYAIVLGDHT----TLTRIISTLPRLAA----DPSKIHTESDSLSQ-------ERVADQIA--SVLD------- 66 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e----~vk~LL~~Gadin~----~~~~l~tAl~~~~~-------e~~~~lI~--a~ln------- 66 (589)
+|+||||+||..|+.+ ++++|++.|++++. .+..+.++++.++. +.+..++. +.++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 5899999999999997 66788889999987 67777777766554 44666666 3333
Q ss_pred ----CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCC-------------CCCHHHHHHHcCCHHHHHHHHH--
Q 007790 67 ----RRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAA-------------GWNPLQEAVCRRNSDIALILLK-- 127 (589)
Q Consensus 67 ----~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~-------------G~TPLh~A~~~G~~eiv~lLL~-- 127 (589)
.+|. .|+||||+||..|+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFY-QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2345 7999999999999999999999999999999886 9999999999999999999999
Q ss_pred -hcCchhHHhhcCCchhHHHHH
Q 007790 128 -LHHRSAWAKWRRRLPRVISVL 148 (589)
Q Consensus 128 -~ga~~~~~~~~g~tPlllA~l 148 (589)
+|++++..+..|.||+++|+.
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCcCccCCCCCCHHHHHHH
Confidence 999999999999999999986
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.79 E-value=9.4e-19 Score=163.29 Aligned_cols=121 Identities=24% Similarity=0.247 Sum_probs=108.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+ ..+.+..++. ++++.+|. .|+||||+|+
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 121 (169)
T 2y1l_E 43 EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLHLAA 121 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 678999999999999999999999999999998886666666554 4455666666 67888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH 129 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g 129 (589)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 122 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 122 MFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999875
No 58
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.1e-18 Score=178.96 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=68.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.+ ..+.+..++. +.++..|. .|.||||+|+
T Consensus 54 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~g~t~L~~A~ 132 (351)
T 3utm_A 54 SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQFTPLHEAA 132 (351)
T ss_dssp SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHH
Confidence 567788888888888888888888888888887776655555544 3445555555 56677776 7888888888
Q ss_pred HcCCHHHHHHHHHCCCCCCcc
Q 007790 82 RLNDAFAARSLASAGADVSLQ 102 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~ 102 (589)
..|+.+++++|+++|++++..
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~ 153 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGADPTLV 153 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHHcCCCCccc
Confidence 888887777777777766543
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=2.3e-19 Score=179.88 Aligned_cols=146 Identities=16% Similarity=0.154 Sum_probs=120.1
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCC-------CC----CC----CCccchhhhhhHHHHHHHHH--hhcCC
Q 007790 8 PEDYSHSPVHYAIVL---GDHTTLTRIISTLPRL-------AA----DP----SKIHTESDSLSQERVADQIA--SVLDR 67 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~---G~~e~vk~LL~~Gadi-------n~----~~----~~l~tAl~~~~~e~~~~lI~--a~ln~ 67 (589)
.|..|.||||+||.. |+.+++++||++|+++ +. .+ +++|.|+.....+.+..++. ++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 588999999999987 9999999999998653 22 22 34455555556666777777 56666
Q ss_pred CCC-------------CCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCcccCCCCCHHHHHHHcCC---------HHHH
Q 007790 68 RDV-------------PFRETPLHLAVRLNDAFAARSLAS---AGADVSLQNAAGWNPLQEAVCRRN---------SDIA 122 (589)
Q Consensus 68 ~D~-------------~~G~TPLHlAv~~g~~e~vklLL~---~GADvn~~d~~G~TPLh~A~~~G~---------~eiv 122 (589)
+|. ..|+||||+||..|+.+++++||+ +|++++.+|..|+||||+|+..|+ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 663 159999999999999999999999 999999999999999999999998 7999
Q ss_pred HHHHHhcCchh-------HHhhcCCchhHHHHHhhccc
Q 007790 123 LILLKLHHRSA-------WAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 123 ~lLL~~ga~~~-------~~~~~g~tPlllA~l~~~~D 153 (589)
++|+++|++++ ..+..|.||+++|+.....+
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 99999999886 47889999999998764433
No 60
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=5.7e-19 Score=178.32 Aligned_cols=143 Identities=17% Similarity=0.102 Sum_probs=118.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
..+..|.||||+||..|+.++++.||++|+++|..+..+.++++.++ .+.+..++. ++++.+|. .|+||||+|
T Consensus 35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A 113 (299)
T 1s70_B 35 KVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAA 113 (299)
T ss_dssp CCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred ccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHH
Confidence 34567889999999999999999999999999988877666666554 455666666 67888887 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccC--------------------------------------------------------
Q 007790 81 VRLNDAFAARSLASAGADVSLQNA-------------------------------------------------------- 104 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~-------------------------------------------------------- 104 (589)
+..|+.+++++|+++|++++..|.
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 999999999999999999987764
Q ss_pred ----CCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhh
Q 007790 105 ----AGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRR 150 (589)
Q Consensus 105 ----~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~ 150 (589)
.|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcC
Confidence 4667778888888888888888888888888888888888887543
No 61
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.78 E-value=1.8e-19 Score=183.22 Aligned_cols=143 Identities=13% Similarity=-0.025 Sum_probs=123.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHc
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADP--SKIHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHLAVRL 83 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~--~~l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~ 83 (589)
.|..|.||||+||..|+.+++++||++|++++..+ +++|.|+.....+.+..++. ++++.+|. .|+||||+|+..
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~~ 105 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALYYAVDS 105 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCcHHHHHHHc
Confidence 68899999999999999999999999999988775 45555555566677788877 67888897 999999999999
Q ss_pred CCHHHHHHHHHCCCCCCcccCCC-CCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 84 NDAFAARSLASAGADVSLQNAAG-WNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 84 g~~e~vklLL~~GADvn~~d~~G-~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|+++|++.... ..|.||+++|+.....
T Consensus 106 g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~ 174 (285)
T 3kea_A 106 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHV 174 (285)
T ss_dssp TCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChH
Confidence 99999999999999999999999 69999999999999999999999776221 2788999999876433
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.78 E-value=1.3e-18 Score=165.14 Aligned_cols=121 Identities=15% Similarity=0.127 Sum_probs=109.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. ++++.+|. .|.||||+|+
T Consensus 64 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 142 (192)
T 2rfm_A 64 KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLIVAS 142 (192)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHH
T ss_pred ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHH
Confidence 5788999999999999999999999999999988877767666554 455566666 67888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH 129 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g 129 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 143 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 143 KYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999875
No 63
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=1.8e-19 Score=175.29 Aligned_cols=113 Identities=19% Similarity=0.171 Sum_probs=104.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHHH
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAFA 88 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e~ 88 (589)
|..|.||||+||..|+.++++.||+.|+++ +.+|. .|+||||+||..|+.++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---------------------------~~~~~-~g~t~L~~A~~~~~~~~ 121 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGV---------------------------NGLDK-AGSTALYWACHGGHKDI 121 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCT---------------------------TCCCT-TSCCHHHHHHHTTCHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCc---------------------------cccCC-CCCCHHHHHHHcCCHHH
Confidence 557899999999999999999999999887 44555 89999999999999999
Q ss_pred HHHHHHC-CCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 89 ARSLASA-GADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 89 vklLL~~-GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
+++|+++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 122 v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp HHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 9999998 999999999999999999999999999999999999999999999999998644
No 64
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=2.7e-19 Score=169.57 Aligned_cols=113 Identities=19% Similarity=0.153 Sum_probs=104.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
.|..|.||||+||..|+.++++.||+ |+++ +.+|. .|+||||+||..|+.+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~---------------------------~~~d~-~g~t~L~~A~~~~~~~ 90 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV---------------------------DAVDE-NGRTALLFVAGLGSDK 90 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT---------------------------TCCCT-TSCCHHHHHHHHTCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC---------------------------CCcCC-CCCCHHHHHHHcCCHH
Confidence 35688999999999999999999999 8776 45555 8999999999999999
Q ss_pred HHHHHHHCCCCCCccc-CCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 88 AARSLASAGADVSLQN-AAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 88 ~vklLL~~GADvn~~d-~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
++++|+++|++++.+| ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 91 ~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 91 CVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 9999999999999998 8999999999999999999999999999999999999999999754
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.77 E-value=4e-19 Score=185.55 Aligned_cols=144 Identities=17% Similarity=0.092 Sum_probs=127.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHHhhcCCCCCCCCCCHHHHHHHc
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIASVLDRRDVPFRETPLHLAVRL 83 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~ 83 (589)
.|..|.||||+||..|+.++|++||++|++++..+..+.++++.++ .+.+..++....+..+. .|.||||+|+..
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~g~t~L~~A~~~ 94 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW-HGQKPIHLAVMA 94 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB-TTBCHHHHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-CCCCHHHHHHHc
Confidence 6889999999999999999999999999999998877777666654 45566677655555555 799999999999
Q ss_pred CCHHHHHHHHHC----CCCCCc-----------------ccCCCCCHHHHHHHcC--CHHHHHHHHHhcCchhHHhhcCC
Q 007790 84 NDAFAARSLASA----GADVSL-----------------QNAAGWNPLQEAVCRR--NSDIALILLKLHHRSAWAKWRRR 140 (589)
Q Consensus 84 g~~e~vklLL~~----GADvn~-----------------~d~~G~TPLh~A~~~G--~~eiv~lLL~~ga~~~~~~~~g~ 140 (589)
|+.+++++|+++ |++++. .|..|+||||+|+..| +.+++++|+++|++++..+..|.
T Consensus 95 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 95 NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 999999999999 888887 8999999999999999 99999999999999999999999
Q ss_pred chhHHHHHhhcc
Q 007790 141 LPRVISVLRRMR 152 (589)
Q Consensus 141 tPlllA~l~~~~ 152 (589)
||+++|+.....
T Consensus 175 t~L~~A~~~g~~ 186 (364)
T 3ljn_A 175 TPLMRAMEFRNR 186 (364)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHcCCH
Confidence 999999876443
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.77 E-value=5.2e-19 Score=177.28 Aligned_cols=133 Identities=17% Similarity=0.126 Sum_probs=108.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------Cccchhhhh----hHHHHHHHHH-----hh
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPS--------------KIHTESDSL----SQERVADQIA-----SV 64 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~--------------~l~tAl~~~----~~e~~~~lI~-----a~ 64 (589)
.|..|.||||+||..|+.+++++||++|++++..+. .+.++++.+ ..+.+..++. ++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 567999999999999999999999999999988775 466666554 4566777777 57
Q ss_pred cCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHHCCCCCC-------cccCCCCCHHHHHHHcCCHHHHHHHHHh
Q 007790 65 LDRRDVPFRETPLHLAVRLND---------AFAARSLASAGADVS-------LQNAAGWNPLQEAVCRRNSDIALILLKL 128 (589)
Q Consensus 65 ln~~D~~~G~TPLHlAv~~g~---------~e~vklLL~~GADvn-------~~d~~G~TPLh~A~~~G~~eiv~lLL~~ 128 (589)
++.+|. .|+||||+||..|+ .+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++
T Consensus 177 ~~~~d~-~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 255 (273)
T 2pnn_A 177 ISARDS-VGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQR 255 (273)
T ss_dssp TTCCCT-TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ceeeCC-CCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHC
Confidence 888997 99999999999998 899999999999997 4899999999999999999999999999
Q ss_pred cC-chhHHhhcCCc
Q 007790 129 HH-RSAWAKWRRRL 141 (589)
Q Consensus 129 ga-~~~~~~~~g~t 141 (589)
|+ +.......+..
T Consensus 256 ga~dp~~~~~~~~~ 269 (273)
T 2pnn_A 256 EIHEPECRHAAAHH 269 (273)
T ss_dssp HTC-----------
T ss_pred CCCCchhhhhhhhh
Confidence 98 66554444433
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=4e-19 Score=167.11 Aligned_cols=127 Identities=20% Similarity=0.184 Sum_probs=114.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.++ .+.+..++. ++++.+|. .|+||||+|+
T Consensus 35 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~ 113 (179)
T 3f6q_A 35 GDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE-HGNVPLHYAC 113 (179)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHH
Confidence 6889999999999999999999999999999988876666665554 455666666 67888997 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHH
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWA 135 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~ 135 (589)
..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++..
T Consensus 114 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 114 FWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp HTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCB
T ss_pred HcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccC
Confidence 999999999999999999999999999999999999999999999999988644
No 68
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.77 E-value=1.8e-18 Score=178.68 Aligned_cols=136 Identities=15% Similarity=0.000 Sum_probs=118.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCccchhhhhhH--------HHHHHHHH--hhcCCCCCCCCCCH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIIS-TLPRLAADPSKIHTESDSLSQ--------ERVADQIA--SVLDRRDVPFRETP 76 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~-~Gadin~~~~~l~tAl~~~~~--------e~~~~lI~--a~ln~~D~~~G~TP 76 (589)
.+..|.||||+||..|+.++|++||+ .|+++|..+..+.++++.... ..+..++. +++|.+|. .|+||
T Consensus 164 ~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~-~g~t~ 242 (337)
T 4g8k_A 164 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKTP 242 (337)
T ss_dssp CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG-GGCCH
T ss_pred ccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC-CCCCH
Confidence 46789999999999999999999996 599999999888887765432 23345555 67899997 99999
Q ss_pred HHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 77 LHLAVRLNDAFAARSLASA-GADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~~-GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
||+|+..|+.++++.|+.+ |++++.+|..|+||||+|+..|+.++|++|+++|++++ ..+|++.|+..
T Consensus 243 L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n-----~~~~L~~A~~~ 311 (337)
T 4g8k_A 243 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD-----CGDLVMTARRN 311 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST-----TCCHHHHHHHT
T ss_pred HHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCHHHHHHHc
Confidence 9999999999999999985 89999999999999999999999999999999999885 35689888754
No 69
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=1.2e-18 Score=186.08 Aligned_cols=143 Identities=18% Similarity=0.204 Sum_probs=122.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhh----hhHHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDS----LSQERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~----~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+||..|+.++|++||++|++++..+..+.++++. ...+.+..++. +.++.+|. .|+||||+|+
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 88 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLHCAA 88 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHH
Confidence 57899999999999999999999999999998887655555554 45556667766 67888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++++++....+..|.||++.|+....
T Consensus 89 ~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~ 158 (437)
T 1n11_A 89 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK 158 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999888888899999999987643
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=3e-18 Score=170.09 Aligned_cols=141 Identities=18% Similarity=0.114 Sum_probs=92.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCC----------CCC
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRR----------DVP 71 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~----------D~~ 71 (589)
.|..|.||||+|+..|+.+++++|+++|++++..+..+.++++.+. .+.+..++. +.++.. +.
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~- 146 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK- 146 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTC-
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhcc-
Confidence 4667777777777777777777777777777766655555554433 333444444 233333 43
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCCHHHHHHHcCC----HHHHHHHHHhcCchhHHhhcCCchhHHH
Q 007790 72 FRETPLHLAVRLNDAFAARSLASA-GADVSLQNAAGWNPLQEAVCRRN----SDIALILLKLHHRSAWAKWRRRLPRVIS 146 (589)
Q Consensus 72 ~G~TPLHlAv~~g~~e~vklLL~~-GADvn~~d~~G~TPLh~A~~~G~----~eiv~lLL~~ga~~~~~~~~g~tPlllA 146 (589)
.|.||||+|+..|+.+++++|+++ |++++..|..|+||||.|+..++ .+++++|+++|++++..+..|.||+++|
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A 226 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA 226 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 566777777777777777777765 77777777777777777777666 6677777777776666666677777766
Q ss_pred HHh
Q 007790 147 VLR 149 (589)
Q Consensus 147 ~l~ 149 (589)
+..
T Consensus 227 ~~~ 229 (285)
T 1wdy_A 227 VEK 229 (285)
T ss_dssp HHT
T ss_pred HHc
Confidence 655
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.77 E-value=1e-18 Score=161.74 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=106.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
..|..|.||||+||..|+.+++++|+++|++++..+..+.++++.++ .+.+..++. ++++.+|. .|+||||+|
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A 115 (165)
T 3twr_A 37 DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHEA 115 (165)
T ss_dssp CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHH
T ss_pred ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHHH
Confidence 36778899999999999999999999999999988876666665554 455666666 67888897 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcC
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHH 130 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga 130 (589)
+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|+
T Consensus 116 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 116 AAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999999999999999876 99999999999875
No 72
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=5.3e-18 Score=168.32 Aligned_cols=140 Identities=16% Similarity=0.123 Sum_probs=89.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHHH
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAVR 82 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~ 82 (589)
+..|.||||+||..|+.+++++||++|++++..+..+.++++.+. .+.+..++. +.++..|. .|.||||+|+.
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 114 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFMEAAV 114 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TCCBHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCc-ccCCHHHHHHH
Confidence 556667777777777777777777777666665544444444333 333444444 44555665 66777777777
Q ss_pred cCCHHHHHHHHHCCCCCCcc----------cCCCCCHHHHHHHcCCHHHHHHHHHh-cCchhHHhhcCCchhHHHHHh
Q 007790 83 LNDAFAARSLASAGADVSLQ----------NAAGWNPLQEAVCRRNSDIALILLKL-HHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 83 ~g~~e~vklLL~~GADvn~~----------d~~G~TPLh~A~~~G~~eiv~lLL~~-ga~~~~~~~~g~tPlllA~l~ 149 (589)
.|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++ +++++..+..|.+|++.++..
T Consensus 115 ~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred hCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 77777777777777666665 55666777777777777777777665 666666666666776666543
No 73
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.77 E-value=2.9e-19 Score=175.07 Aligned_cols=143 Identities=17% Similarity=0.104 Sum_probs=118.9
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCccchhhhhhHHHHHHHHH------hhcCCCCCCCCCCH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTLP----RLAADPSKIHTESDSLSQERVADQIA------SVLDRRDVPFRETP 76 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Ga----din~~~~~l~tAl~~~~~e~~~~lI~------a~ln~~D~~~G~TP 76 (589)
.+|..|.||||+||..|+.++++.||+.+. +++..+..+.++++.++.......+. ++++.+|. .|+||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~ 81 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNTP 81 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCCH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCH
Confidence 368999999999999999999999998776 67888877777777666554444433 56788887 99999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC------CCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhh-cCCchhHHHHHh
Q 007790 77 LHLAVRLNDAFAARSLASAGAD------VSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKW-RRRLPRVISVLR 149 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~~GAD------vn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~-~g~tPlllA~l~ 149 (589)
||+||..|+.+++++|+.+|++ ++..|..|+||||+|+..|+.+++++|+++|++++..+. .|.||+++|+..
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999987 567788999999999999999999999999999998887 999999999865
Q ss_pred h
Q 007790 150 R 150 (589)
Q Consensus 150 ~ 150 (589)
.
T Consensus 162 ~ 162 (236)
T 1ikn_D 162 Q 162 (236)
T ss_dssp T
T ss_pred C
Confidence 4
No 74
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.76 E-value=2.1e-18 Score=181.97 Aligned_cols=143 Identities=12% Similarity=0.088 Sum_probs=124.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH-----hhcCCCCCCCCCCHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA-----SVLDRRDVPFRETPLH 78 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~-----a~ln~~D~~~G~TPLH 78 (589)
.|..|.||||+||..|+.+++++||++|++++..+..+.++++.++. +.+..++. ..++..|. .|.||||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~g~t~L~ 240 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMTALM 240 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-TSCCHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-CCCCHHH
Confidence 57899999999999999999999999999999888777777766554 44555554 47788887 9999999
Q ss_pred HHHHcC---CHHHHHHHHHCCCCCCc--------ccCCCCCHHHHHHHcCCHHHHHHHHHhc-CchhHHhhcCCchhHHH
Q 007790 79 LAVRLN---DAFAARSLASAGADVSL--------QNAAGWNPLQEAVCRRNSDIALILLKLH-HRSAWAKWRRRLPRVIS 146 (589)
Q Consensus 79 lAv~~g---~~e~vklLL~~GADvn~--------~d~~G~TPLh~A~~~G~~eiv~lLL~~g-a~~~~~~~~g~tPlllA 146 (589)
+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|++++ ++++..+..|.||+++|
T Consensus 241 ~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A 320 (373)
T 2fo1_E 241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLA 320 (373)
T ss_dssp HHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHH
T ss_pred HHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHH
Confidence 999998 89999999999999986 5678999999999999999999999886 89999999999999999
Q ss_pred HHhhc
Q 007790 147 VLRRM 151 (589)
Q Consensus 147 ~l~~~ 151 (589)
+....
T Consensus 321 ~~~g~ 325 (373)
T 2fo1_E 321 AQEGR 325 (373)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 86543
No 75
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.76 E-value=9e-19 Score=177.40 Aligned_cols=144 Identities=12% Similarity=0.103 Sum_probs=105.9
Q ss_pred CCCCCChHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHT-TLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e-~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+|+..++.. ++++|++.|+++|..+..+.||++.++. +.+..++. ++++.++. .|.||||+|
T Consensus 48 ~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~-~g~t~l~~a 126 (269)
T 4b93_B 48 ADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNA-DQAVPLHLA 126 (269)
T ss_dssp ---------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCT-TCCCHHHHH
T ss_pred cCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCC-CCCCccccc
Confidence 5678999999999988764 8899999999999999877777766554 45666666 67788887 999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhcc
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMR 152 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~ 152 (589)
+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....
T Consensus 127 ~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 127 CQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred cccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999876433
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.76 E-value=1e-18 Score=173.44 Aligned_cols=140 Identities=18% Similarity=0.126 Sum_probs=118.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHH----HHcCCCCCCCC----CCccchhhhhh-------HHHHHHHHHh----------
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRI----ISTLPRLAADP----SKIHTESDSLS-------QERVADQIAS---------- 63 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~L----L~~Gadin~~~----~~l~tAl~~~~-------~e~~~~lI~a---------- 63 (589)
+.+|+|+||.||..|+.++++.| ++.|++++..+ ..+.++++.+. .+.+..++..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 67899999999999999965544 45999988655 44666666444 5556666652
Q ss_pred ---hcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccc--------------CCCCCHHHHHHHcCCHHHHHHHH
Q 007790 64 ---VLDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQN--------------AAGWNPLQEAVCRRNSDIALILL 126 (589)
Q Consensus 64 ---~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d--------------~~G~TPLh~A~~~G~~eiv~lLL 126 (589)
.++..|. .|+||||+||..|+.+++++||++|++++..+ ..|+||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 82 INSPFRDVYY-RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HTCCBCCSSE-ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hccccccccc-CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 2455565 89999999999999999999999999999998 68999999999999999999999
Q ss_pred H---hcCchhHHhhcCCchhHHHHHh
Q 007790 127 K---LHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 127 ~---~ga~~~~~~~~g~tPlllA~l~ 149 (589)
+ +|++++..+..|.||+++|+..
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred hccccCCCCcccCCCCCcHHHHHHHh
Confidence 9 9999999999999999999853
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.76 E-value=5.1e-19 Score=174.91 Aligned_cols=129 Identities=16% Similarity=0.114 Sum_probs=74.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.+..|.||||+||..|+.+++++||+.|++++..+..+.++++.++ .+.+..++. ++++.+|. .|+||||+||
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~-~g~tpLh~A~ 95 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDS-HGWTPLHCAA 95 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHH
Confidence 5667889999999999999999999999988666543333333322 222333333 34444444 4555555555
Q ss_pred HcCCHHHHHHHHHCCCCCCccc-CCCCCHHHHH--HHcCCHHHHHHHHHhcCchhHHhh
Q 007790 82 RLNDAFAARSLASAGADVSLQN-AAGWNPLQEA--VCRRNSDIALILLKLHHRSAWAKW 137 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d-~~G~TPLh~A--~~~G~~eiv~lLL~~ga~~~~~~~ 137 (589)
..|+.+++++|+++|++++..+ ..|+||||+| +..|+.+++++|+++|++++..+.
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 5555555555555555555443 3455555555 444555555555555544444333
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.76 E-value=2.5e-18 Score=181.46 Aligned_cols=145 Identities=12% Similarity=0.100 Sum_probs=126.6
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCccchhhhhh-------HHHHHHHHH--hhcCC--------
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTL---PRLAADPSKIHTESDSLS-------QERVADQIA--SVLDR-------- 67 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~G---adin~~~~~l~tAl~~~~-------~e~~~~lI~--a~ln~-------- 67 (589)
.|..|.||||+||..|+.+++++||++| ++++..+..+.++++.++ .+.+..++. +.++.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 5789999999999999999999999988 788888888888887654 344455665 34443
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHH
Q 007790 68 RDVPFRETPLHLAVRLNDAFAARSLASAG-ADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVIS 146 (589)
Q Consensus 68 ~D~~~G~TPLHlAv~~g~~e~vklLL~~G-ADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA 146 (589)
.|. .|+||||+||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||+++|
T Consensus 275 ~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 275 EKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred ccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 565 8999999999999999999999876 99999999999999999999999999999999999999999999999999
Q ss_pred HHhhccc
Q 007790 147 VLRRMRD 153 (589)
Q Consensus 147 ~l~~~~D 153 (589)
+.....+
T Consensus 354 ~~~g~~~ 360 (373)
T 2fo1_E 354 QANNHHN 360 (373)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 8764433
No 79
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.75 E-value=7.5e-18 Score=160.14 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=123.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRIISTLP-RLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~LL~~Ga-din~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
+.++.||||.||..|+.+.++.||..+. +++..+..+.++++.+ ..+.+..++. ++++.+|. .|+||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 4678999999999999999999999887 8888876666666554 4555666666 67888887 9999999999
Q ss_pred HcCCHHHHHHHH-HCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc-CchhHHhhcCCchhHHHHHh
Q 007790 82 RLNDAFAARSLA-SAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH-HRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 82 ~~g~~e~vklLL-~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g-a~~~~~~~~g~tPlllA~l~ 149 (589)
..|+.+++++|+ ..+++++..|..|+||||+|+..|+.+++++|+++| ++++..+..|.||++.|+..
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 999999999999 678899999999999999999999999999999999 89999999999999999754
No 80
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=1.5e-18 Score=172.71 Aligned_cols=111 Identities=20% Similarity=0.168 Sum_probs=103.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHHH
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAFA 88 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e~ 88 (589)
+..|.||||+||..|+.++++.||+ |+++ |.+|. .|+||||+||..|+.++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~---------------------------~~~d~-~g~t~L~~A~~~g~~~~ 92 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV---------------------------DAVDE-NGRTALLFVAGLGSDKC 92 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT---------------------------TCBCT-TSCBHHHHHHHHTCHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC---------------------------CCcCC-CCCCHHHHHHHCCCHHH
Confidence 4578999999999999999999999 8776 45565 89999999999999999
Q ss_pred HHHHHHCCCCCCccc-CCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHH
Q 007790 89 ARSLASAGADVSLQN-AAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVL 148 (589)
Q Consensus 89 vklLL~~GADvn~~d-~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l 148 (589)
+++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.
T Consensus 93 v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 93 VRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 999999999999998 789999999999999999999999999999999999999999974
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=2.8e-19 Score=171.75 Aligned_cols=85 Identities=6% Similarity=-0.136 Sum_probs=62.1
Q ss_pred hcCCCCCCCCCCHHHHHHHcCC------HHHHHHHHHCCCCCCcccCCCC-CHHHHHHHcC-----CHHHHHHHHH-hcC
Q 007790 64 VLDRRDVPFRETPLHLAVRLND------AFAARSLASAGADVSLQNAAGW-NPLQEAVCRR-----NSDIALILLK-LHH 130 (589)
Q Consensus 64 ~ln~~D~~~G~TPLHlAv~~g~------~e~vklLL~~GADvn~~d~~G~-TPLh~A~~~G-----~~eiv~lLL~-~ga 130 (589)
++|.+|. .|+||||+|+..|+ .+++++||++|||+|.+|..|+ ||||+|+..+ +.+++++|++ +|+
T Consensus 67 dvn~~d~-~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 67 DIKSRTK-EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145 (186)
T ss_dssp CSSCCCT-TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCC-CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence 4455665 77888888777776 5677778888888888877777 7888777743 3457777777 777
Q ss_pred chhHHhhcCCchhHHHHHh
Q 007790 131 RSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 131 ~~~~~~~~g~tPlllA~l~ 149 (589)
+++..+..|.||+++|...
T Consensus 146 d~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 146 QLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp CTTCCCTTSCCHHHHHHTT
T ss_pred CCcccCCCCCCHHHHHHHc
Confidence 7777777788888777654
No 82
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.75 E-value=7.5e-18 Score=163.25 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=97.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----CCccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADP-----SKIHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~-----~~l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
.|..|.||||+||..|+.+++++|+++|++++... ++++.|+.....+.+..++. +.++..|. .|.||||+|
T Consensus 38 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A 116 (240)
T 3eu9_A 38 PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG-EGCSCIHLA 116 (240)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHH
Confidence 46677788888888888888888888877765433 23333434444455555555 45666666 777888888
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCC-HHHHHHHHHhcCchhHHhh-cCCchhHHHHHhh
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRN-SDIALILLKLHHRSAWAKW-RRRLPRVISVLRR 150 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~-~eiv~lLL~~ga~~~~~~~-~g~tPlllA~l~~ 150 (589)
+..|+.+++++|+++|++++..|..|+||||+|+..++ .+++++|++.+++++..+. .|.||+++|+...
T Consensus 117 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 117 AQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred HHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence 87777777777777777777777777777777775555 6677777777777666654 6667777766553
No 83
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.74 E-value=1.8e-18 Score=175.86 Aligned_cols=138 Identities=15% Similarity=0.013 Sum_probs=121.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCC-CCHHHHHHHc
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFR-ETPLHLAVRL 83 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G-~TPLHlAv~~ 83 (589)
+|.||||+||..|+.+++++||++|++++..+..+.+|++.++ .+.+..++. ++++.+|. .| .||||+|+..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHHc
Confidence 5999999999999999999999999999988877666666554 455666666 67888897 88 8999999999
Q ss_pred CCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCch-hHHHHHhh
Q 007790 84 NDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLP-RVISVLRR 150 (589)
Q Consensus 84 g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tP-lllA~l~~ 150 (589)
|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++..+..|.|| +++|+...
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcC
Confidence 9999999999999987333 289999999999999999999999999999999999998 88887653
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=8.5e-18 Score=162.85 Aligned_cols=144 Identities=19% Similarity=0.140 Sum_probs=124.6
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhh----hHHHHHHHHH--hhcCCCCCCCCCCHHHHH
Q 007790 7 KPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSL----SQERVADQIA--SVLDRRDVPFRETPLHLA 80 (589)
Q Consensus 7 ~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~----~~e~~~~lI~--a~ln~~D~~~G~TPLHlA 80 (589)
..|.+|.||||+||..|+.++++.|++.|++++..+..+.++++.+ ..+.+..++. ..++..+...|.||||+|
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 3688999999999999999999999999999988876666665554 5556666666 334433332599999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhh
Q 007790 81 VRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRR 150 (589)
Q Consensus 81 v~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~ 150 (589)
+..|+.+++++|+++|++++..|..|+||||.|+..|+.+++++|+++|++++..+..|.+|++.++...
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998543
No 85
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.74 E-value=7.8e-18 Score=154.05 Aligned_cols=118 Identities=16% Similarity=0.232 Sum_probs=106.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhh----HHHHHHHHH--hhcCCCCCCCCCCHHHHHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLS----QERVADQIA--SVLDRRDVPFRETPLHLAV 81 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~----~e~~~~lI~--a~ln~~D~~~G~TPLHlAv 81 (589)
.|..|.||||+ |..|+.+++++|+++|++++..+..+.++++.++ .+.+..++. ++++.+|. .|+||||+|+
T Consensus 32 ~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 109 (156)
T 1bd8_A 32 LNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAV 109 (156)
T ss_dssp CCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHH
T ss_pred cCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHH
Confidence 67899999999 9999999999999999999988877666666554 455666666 57888897 9999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh
Q 007790 82 RLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKL 128 (589)
Q Consensus 82 ~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ 128 (589)
..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 110 ~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 110 QEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999 99999999999999999999999999999875
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.74 E-value=1.1e-17 Score=150.63 Aligned_cols=94 Identities=28% Similarity=0.368 Sum_probs=87.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
.|..|.||||+||..|+.+++++||++|+++ +.+|. .|+||||+|+..|+.+
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------------------~~~d~-~g~t~L~~A~~~~~~~ 94 (136)
T 2jab_A 43 KDEYGLTPLYLATAHGHLEIVEVLLKNGADV---------------------------NAVDA-IGFTPLHLAAFIGHLE 94 (136)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---------------------------TCCCT-TCCCHHHHHHHHTCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------------------CcCCC-CCCCHHHHHHHcCCHH
Confidence 5788999999999999999999999999887 44555 8999999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc
Q 007790 88 AARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH 129 (589)
Q Consensus 88 ~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g 129 (589)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 95 ~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 95 IAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999875
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.74 E-value=2.2e-17 Score=170.40 Aligned_cols=139 Identities=15% Similarity=0.108 Sum_probs=107.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHH----HHHHH--hhcCCCCCCCCCCHHHHHHHc
Q 007790 10 DYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERV----ADQIA--SVLDRRDVPFRETPLHLAVRL 83 (589)
Q Consensus 10 ~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~----~~lI~--a~ln~~D~~~G~TPLHlAv~~ 83 (589)
..|+||||+||..|+.++|++||++|++++..+..+.++++....... ..++. ..++..|. .|+||||+|+..
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~t~l~~A~~~ 135 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFMEAAVY 135 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCCBHHHHHHHT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhcc-CCCCHHHHHHHc
Confidence 346777777777777777777777777776666555555544333322 22222 46778887 899999999999
Q ss_pred CCHHHHHHHHHCCCCCCcc----------cCCCCCHHHHHHHcCCHHHHHHHHHh-cCchhHHhhcCCchhHHHHHh
Q 007790 84 NDAFAARSLASAGADVSLQ----------NAAGWNPLQEAVCRRNSDIALILLKL-HHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 84 g~~e~vklLL~~GADvn~~----------d~~G~TPLh~A~~~G~~eiv~lLL~~-ga~~~~~~~~g~tPlllA~l~ 149 (589)
|+.+++++|+++|++++.. +..|+||||+|+..|+.++|++||.+ |++++..+..|.++++.+...
T Consensus 136 ~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~ 212 (337)
T 4g8k_A 136 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 212 (337)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHH
Confidence 9999999999999998764 44689999999999999999999964 899999999999999877654
No 88
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.73 E-value=2.5e-18 Score=170.04 Aligned_cols=131 Identities=15% Similarity=0.097 Sum_probs=111.2
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhH----HHHHHHHH--hhcCCCCCCCCCCHHHH
Q 007790 6 IKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQ----ERVADQIA--SVLDRRDVPFRETPLHL 79 (589)
Q Consensus 6 i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----e~~~~lI~--a~ln~~D~~~G~TPLHl 79 (589)
++.+..|.||||+||..|+.++++.||+.|+++|..+..+.++++.++. +.+..++. ++++.+|. .|+||||+
T Consensus 31 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~ 109 (239)
T 1ycs_B 31 VKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHC 109 (239)
T ss_dssp ------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHH
T ss_pred cccCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHH
Confidence 3456778999999999999999999999999999998777777766654 45566666 68899998 99999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcccCCCC-CHHHHH--HHcCCHHHHHHHHHhcCchhHHhh
Q 007790 80 AVRLNDAFAARSLASAGADVSLQNAAGW-NPLQEA--VCRRNSDIALILLKLHHRSAWAKW 137 (589)
Q Consensus 80 Av~~g~~e~vklLL~~GADvn~~d~~G~-TPLh~A--~~~G~~eiv~lLL~~ga~~~~~~~ 137 (589)
||..|+.+++++|+++|++++..|..|. ||||+| +..|+.+++++|+.++++.+..+.
T Consensus 110 A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 110 AASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred HHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence 9999999999999999999999998877 999999 788999999999999988765543
No 89
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=1.4e-17 Score=145.14 Aligned_cols=93 Identities=25% Similarity=0.253 Sum_probs=83.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcC
Q 007790 5 AIKPEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 5 ~i~~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g 84 (589)
....|..|.||||+||..|+.+++++||++|+++ +.+|. .|+||||+||..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i---------------------------~~~d~-~g~tpLh~A~~~~ 68 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADV---------------------------AAKDK-NGSTPLHLAARNG 68 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT---------------------------TCCCT-TCCCHHHHHHHTT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC---------------------------CccCC-CCCCHHHHHHHcC
Confidence 3458999999999999999999999999999887 44555 8999999999999
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALIL 125 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lL 125 (589)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 69 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 69 HLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999886
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.72 E-value=2.6e-17 Score=169.73 Aligned_cols=132 Identities=17% Similarity=0.055 Sum_probs=110.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCccchhhhhh-------HHHHHHHHH--hhcCCCCCCCCCC
Q 007790 11 YSHSPVHYAIVLGDHTTLTRIISTLPRLAA------DPSKIHTESDSLS-------QERVADQIA--SVLDRRDVPFRET 75 (589)
Q Consensus 11 ~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~------~~~~l~tAl~~~~-------~e~~~~lI~--a~ln~~D~~~G~T 75 (589)
.+.++||.|+..|+.+.++.||+.|++++. .+..+.++++.+. .+.+..++. +++|.+|. .|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCC
Confidence 345789999999999999999999999987 4666666666554 445666666 67889997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHh
Q 007790 76 PLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLR 149 (589)
Q Consensus 76 PLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~ 149 (589)
|||+|+..|+.+++++||++|||++.+|..|+||||+|+..|+.+++++|+++|++ .+.||+++|+..
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSW 296 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence 99999999999999999999999999999999999999999999999999998865 578999988643
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.70 E-value=5.6e-17 Score=165.21 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=90.2
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcC
Q 007790 8 PEDYSHSPVHYAIVL---GDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLN 84 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~---G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g 84 (589)
.|..|.||||+||.. |+.+++++||++|+++ |.+|. .|+||||+|+..|
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i---------------------------n~~d~-~g~TpLh~A~~~g 216 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL---------------------------DKQTG-KGSTALHYCCLTD 216 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT---------------------------TCCCT-TCCCHHHHHHHTT
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHCCCCc---------------------------cccCC-CCCCHHHHHHHcC
Confidence 478899999999999 8999999999999887 44555 8999999999999
Q ss_pred CHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc
Q 007790 85 DAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR 131 (589)
Q Consensus 85 ~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~ 131 (589)
+.+++++||++|||++.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 217 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 217 NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999874
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.69 E-value=1.2e-16 Score=175.52 Aligned_cols=122 Identities=18% Similarity=0.062 Sum_probs=105.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCC------CCCccchhhhh-------hHHHHHHHHH--hhcCCCCCCCCCCH
Q 007790 12 SHSPVHYAIVLGDHTTLTRIISTLPRLAAD------PSKIHTESDSL-------SQERVADQIA--SVLDRRDVPFRETP 76 (589)
Q Consensus 12 G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~------~~~l~tAl~~~-------~~e~~~~lI~--a~ln~~D~~~G~TP 76 (589)
..+.||.||..|+.++++.||+.|+++|.. +..+.++++.+ ..+.+..++. +++|.+|. .|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcH
Confidence 347899999999999999999999999876 66677777666 3455666666 78999998 99999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhH
Q 007790 77 LHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAW 134 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~ 134 (589)
||+||..|+.+++++||++|||++.+|..|+||||+|+..|+.+++++|+++|++.+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998865
No 93
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.67 E-value=1.5e-16 Score=161.04 Aligned_cols=121 Identities=20% Similarity=0.101 Sum_probs=107.0
Q ss_pred CCCCCChHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCccchhhh----hhHHHHHHHHH--hhcCCCCCCCCCCH
Q 007790 8 PEDYSHSPVHYAI-----VLGDHTTLTRIISTLPRLAADPSKIHTESDS----LSQERVADQIA--SVLDRRDVPFRETP 76 (589)
Q Consensus 8 ~D~~G~TPLH~Aa-----~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~----~~~e~~~~lI~--a~ln~~D~~~G~TP 76 (589)
.|..|.||||+|+ ..++.++++.|++.|..++..+..+.++++. ...+.+..++. +++|.+|. .|+||
T Consensus 141 ~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~Tp 219 (276)
T 4hbd_A 141 QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTA 219 (276)
T ss_dssp CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCH
T ss_pred CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCH
Confidence 6789999999999 6689999999999998887776555555555 44556666766 67889998 99999
Q ss_pred HHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc
Q 007790 77 LHLAVRLNDAFAARSLAS-AGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH 129 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~-~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g 129 (589)
||+|+..|+.+++++||+ +|+|++.+|..|+||||+|+..|+.+++++|++++
T Consensus 220 Lh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 220 LMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999 89999999999999999999999999999999875
No 94
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.66 E-value=2.8e-16 Score=160.00 Aligned_cols=119 Identities=19% Similarity=0.118 Sum_probs=106.9
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHc---CCHHHH
Q 007790 13 HSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRL---NDAFAA 89 (589)
Q Consensus 13 ~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~---g~~e~v 89 (589)
.++||.|+..|+.+.+..|++.|++++..- .++..|. .|+||||+||.. |+.+++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---------------------~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v 188 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---------------------PLANGHE-PDETALHLAVRSVDRTSLHIV 188 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---------------------CCSSCSS-TTCBHHHHHHHHCCTTTHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---------------------ccccccc-CCCCcchHHHHhcccchHHHH
Confidence 368999999999999999999998874321 1456676 899999999999 899999
Q ss_pred HHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 90 RSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 90 klLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 189 ~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 189 DFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp HHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999998764433
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.66 E-value=1.9e-16 Score=168.24 Aligned_cols=112 Identities=21% Similarity=0.149 Sum_probs=70.9
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHHHH
Q 007790 11 YSHSPVHYAIVL-GDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAFAA 89 (589)
Q Consensus 11 ~G~TPLH~Aa~~-G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e~v 89 (589)
.+.|+||+||.. |+.++++.||++|+++|..+ .+. .|.||||+||..|+.+++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~-------------------------~~~-~g~TpLh~Aa~~g~~~iv 251 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVN-------------------------GGQ-DNATPLIQATAANSLLAC 251 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCC-------------------------TTT-TCCCHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccc-------------------------ccc-CCCCHHHHHHHCCCHHHH
Confidence 456899999999 99999999999999986654 012 455555555555555555
Q ss_pred HHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHH
Q 007790 90 RSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVL 148 (589)
Q Consensus 90 klLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l 148 (589)
++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.
T Consensus 252 ~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~ 310 (368)
T 3jue_A 252 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAME 310 (368)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555555555543
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.64 E-value=1.4e-16 Score=154.79 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=83.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIIST-LPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDA 86 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~-Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~ 86 (589)
.|..|.||||+||..|+.+++++||++ |+++ +.+|. .|+||||+|+..|+.
T Consensus 102 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~---------------------------~~~d~-~g~tpL~~A~~~~~~ 153 (222)
T 3ehr_A 102 LDKAGSTALYWACHGGHKDIVEMLFTQPNIEL---------------------------NQQNK-LGDTALHAAAWKGYA 153 (222)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC---------------------------CCCCT-TSCCHHHHHHHHTCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc---------------------------cccCC-CCCCHHHHHHHcCCH
Confidence 688999999999999999999999998 8877 45555 899999999999999
Q ss_pred HHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhc
Q 007790 87 FAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWR 138 (589)
Q Consensus 87 e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~ 138 (589)
+++++||++|++++.+|..|+||||+|+..|+.++++.|+.+++.....+..
T Consensus 154 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 154 DIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp HHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred HHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 9999999999999999999999999999999999999999999877665543
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.62 E-value=1.7e-15 Score=133.66 Aligned_cols=80 Identities=23% Similarity=0.274 Sum_probs=74.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
.|..|.||||+||..|+.+++++|+++|+++ +.+|. .|+||||+|+..|+.+
T Consensus 36 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------------------~~~d~-~g~tpL~~A~~~~~~~ 87 (123)
T 3aaa_C 36 TLEGGRKPLHYAADCGQLEILEFLLLKGADI---------------------------NAPDK-HHITPLLSAVYEGHVS 87 (123)
T ss_dssp CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT---------------------------TCCCT-TSCCHHHHHHHHTCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---------------------------CcCCC-CCCCHHHHHHHcCCHH
Confidence 6789999999999999999999999999887 44555 8999999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCCHHHHHHH
Q 007790 88 AARSLASAGADVSLQNAAGWNPLQEAVC 115 (589)
Q Consensus 88 ~vklLL~~GADvn~~d~~G~TPLh~A~~ 115 (589)
++++|+++|++++.+|..|+||||+|+.
T Consensus 88 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 88 CVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999999999999943
No 98
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.62 E-value=2e-15 Score=149.07 Aligned_cols=118 Identities=15% Similarity=0.103 Sum_probs=95.7
Q ss_pred HHHHHHcCCCCCCCCC-------CccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 007790 28 LTRIISTLPRLAADPS-------KIHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHLAVRLNDAFAARSLASAGAD 98 (589)
Q Consensus 28 vk~LL~~Gadin~~~~-------~l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GAD 98 (589)
++.||+.|++++..+. +++.|+.....+.+..++. ++++.+|. .|+||||+||..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNE-EGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 4678999998875552 2444556666677777777 57888997 999999999999999999999999999
Q ss_pred CCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHh-hcCCchhHHH
Q 007790 99 VSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAK-WRRRLPRVIS 146 (589)
Q Consensus 99 vn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~-~~g~tPlllA 146 (589)
++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||+++|
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 99999999999999999999999999999999998875 6999999998
No 99
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.61 E-value=5.6e-16 Score=139.34 Aligned_cols=115 Identities=17% Similarity=0.130 Sum_probs=99.5
Q ss_pred CCCCCCCCCCccchhhh----hhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCC-CC
Q 007790 35 LPRLAADPSKIHTESDS----LSQERVADQIA--SVLDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAA-GW 107 (589)
Q Consensus 35 Gadin~~~~~l~tAl~~----~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~-G~ 107 (589)
+++++..+..+.++++. ...+.+..++. ++++.+|. .|+||||+||. |+.+++++|+++|++++.+|.. |+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNR-FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 45667777655555554 45556667776 57888897 99999999999 9999999999999999999999 99
Q ss_pred CHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 108 NPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 108 TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999987643
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.61 E-value=2.3e-16 Score=141.69 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=83.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
.|..|.||||+||..|+.+++++|+++|+++ +.+|. .|+||||+|+..|+.+
T Consensus 39 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------------------------~~~~~-~g~t~L~~A~~~~~~~ 90 (137)
T 3c5r_A 39 KDHAGWTPLHEACNHGHLKVVELLLQHKALV---------------------------NTTGY-QNDSPLHDAAKNGHVD 90 (137)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---------------------------TCCCG-GGCCHHHHHHHTTCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc---------------------------cCcCC-CCCCHHHHHHHcCCHH
Confidence 6789999999999999999999999999887 44554 8999999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhc
Q 007790 88 AARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLH 129 (589)
Q Consensus 88 ~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~g 129 (589)
++++|+++|++++.+|..|+||||+|+..+..+++.+|.+.+
T Consensus 91 ~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 91 IVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999999999999999999988888888777654
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.60 E-value=2.5e-15 Score=159.57 Aligned_cols=94 Identities=22% Similarity=0.261 Sum_probs=88.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHHHH
Q 007790 10 DYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAFAA 89 (589)
Q Consensus 10 ~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e~v 89 (589)
..|.||||+||..|+.+++++||++|+++ |.+|. .|+||||+|+..|+.+++
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv---------------------------n~~d~-~G~TpLh~A~~~g~~~~v 284 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANV---------------------------NQADS-AGRGPLHHATILGHTGLA 284 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT---------------------------TCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCC---------------------------CCCCC-CCCCHHHHHHHcCcHHHH
Confidence 78999999999999999999999999887 44555 899999999999999999
Q ss_pred HHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCc
Q 007790 90 RSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHR 131 (589)
Q Consensus 90 klLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~ 131 (589)
++||++||+++.+|..|+||||+|+..|+.+++++|+.++..
T Consensus 285 ~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 285 CLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999988743
No 102
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.60 E-value=6.2e-16 Score=160.33 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=87.0
Q ss_pred CCCCCChHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCCCCccchhhhhhHHHHHHHHHh
Q 007790 8 PEDYSHSPVHYAIV----LGDHTTLTRIIST--------------------LPRLAADPSKIHTESDSLSQERVADQIAS 63 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~----~G~~e~vk~LL~~--------------------Gadin~~~~~l~tAl~~~~~e~~~~lI~a 63 (589)
.|..|+||||+||. .|+.+++++||+. |++++..+..+.++++.+.. +..++..
T Consensus 197 ~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~--~~~Ll~~ 274 (327)
T 1sw6_A 197 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD--LKWIIAN 274 (327)
T ss_dssp ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS--HHHHHHH
T ss_pred CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH--HHHHHHh
Confidence 68899999999999 8999999999987 88999999999999988775 6777778
Q ss_pred hcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcC
Q 007790 64 VLDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRR 117 (589)
Q Consensus 64 ~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G 117 (589)
+++.+|. .|+||||+||..|+.+++++||++|||++.+|..|+||||+|+..|
T Consensus 275 ~~n~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 275 MLNAQDS-NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTTCCCT-TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 8999998 9999999999999999999999999999999999999999998764
No 103
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.60 E-value=5.8e-16 Score=146.55 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=80.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCC-CCCCCCHHHHHHHcCCH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRD-VPFRETPLHLAVRLNDA 86 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D-~~~G~TPLHlAv~~g~~ 86 (589)
.|..|+||||+||..|+.+++++||++|+++| .+| . .|+||||+|+..|+.
T Consensus 72 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------------------------~~~~~-~g~tpL~~A~~~~~~ 123 (183)
T 3deo_A 72 VDENGRTALLFVAGLGSDKCVRLLAEAGADLD---------------------------HRDMR-GGLTALHMAAGYVRP 123 (183)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------------------CCCSS-SSCCHHHHHHHTTCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------------------------cCCCC-CCCCHHHHHHhcCcH
Confidence 68899999999999999999999999998874 344 4 799999999999999
Q ss_pred HHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q 007790 87 FAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLK 127 (589)
Q Consensus 87 e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~ 127 (589)
+++++|+++|++++.+|..|+||||+|+..++...+..++.
T Consensus 124 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~ 164 (183)
T 3deo_A 124 EVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQ 164 (183)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHH
T ss_pred HHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHH
Confidence 99999999999999999999999999987655443333333
No 104
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.60 E-value=2.1e-15 Score=149.93 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=84.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHH
Q 007790 8 PEDYSHSPVHYAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAF 87 (589)
Q Consensus 8 ~D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e 87 (589)
.|..|+||||+||..|+.+++++||++|+++| .+|...|+||||+||..|+.+
T Consensus 73 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---------------------------~~~~~~g~t~L~~A~~~g~~~ 125 (244)
T 3ui2_A 73 VDENGRTALLFVAGLGSDKCVRLLAEAGADLD---------------------------HRDMRGGLTALHMAAGYVRPE 125 (244)
T ss_dssp BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT---------------------------CCCSSSCCCHHHHHHHTTCHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---------------------------cCCCCCCCCHHHHHHHcCCHH
Confidence 67899999999999999999999999999884 344127999999999999999
Q ss_pred HHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 88 AARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 88 ~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
++++|+++|++++.+|..|+||||+|+..++ ...+.+|+++++....
T Consensus 126 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~ 172 (244)
T 3ui2_A 126 VVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGL 172 (244)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcCh
Confidence 9999999999999999999999999985322 1345677776665533
No 105
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.58 E-value=6.5e-16 Score=148.19 Aligned_cols=122 Identities=7% Similarity=-0.089 Sum_probs=107.5
Q ss_pred CCCChHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCccchhhhhhH----------HHHHHHHH--hhcCCCCCCCC
Q 007790 10 DYSHSPVHYAIVLGD----HTTLTRIISTLPRLAADPSKIHTESDSLSQ----------ERVADQIA--SVLDRRDVPFR 73 (589)
Q Consensus 10 ~~G~TPLH~Aa~~G~----~e~vk~LL~~Gadin~~~~~l~tAl~~~~~----------e~~~~lI~--a~ln~~D~~~G 73 (589)
..|+||||+||..|+ .+++++||++|+++|..+..+.||++.+.. +.+..++. +++|.+|. .|
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~-~g 114 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK-PY 114 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBG-GG
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCC-Cc
Confidence 679999999999985 999999999999999999888888876543 34566666 78999998 99
Q ss_pred C-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCch
Q 007790 74 E-TPLHLAVRLN-----DAFAARSLAS-AGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRS 132 (589)
Q Consensus 74 ~-TPLHlAv~~g-----~~e~vklLL~-~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~ 132 (589)
+ ||||+|+..+ +.+++++||+ +|+|++.+|..|+||||+|+..|+.++|++|+.+....
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~ 180 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKY 180 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9 9999999955 4569999999 99999999999999999999999999999999876443
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.56 E-value=5.4e-15 Score=124.27 Aligned_cols=81 Identities=26% Similarity=0.281 Sum_probs=75.4
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 72 FRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 72 ~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
+|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999986543
Q ss_pred c
Q 007790 152 R 152 (589)
Q Consensus 152 ~ 152 (589)
.
T Consensus 81 ~ 81 (93)
T 1n0q_A 81 L 81 (93)
T ss_dssp H
T ss_pred H
Confidence 3
No 107
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.54 E-value=1.8e-14 Score=125.74 Aligned_cols=108 Identities=23% Similarity=0.259 Sum_probs=96.7
Q ss_pred CCccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHH
Q 007790 43 SKIHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSD 120 (589)
Q Consensus 43 ~~l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~e 120 (589)
++++.|+.....+.+..++. ..++..|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 82 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHH
Confidence 45666666677777777777 56788887 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 121 IALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 121 iv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
++++|+++|++++..+..|.||+++|+....
T Consensus 83 ~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 113 (126)
T 1n0r_A 83 VVKLLLEAGADVNAKDKNGRTPLHLAARNGH 113 (126)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHcCc
Confidence 9999999999999999999999999986543
No 108
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.52 E-value=6.8e-15 Score=135.34 Aligned_cols=108 Identities=17% Similarity=0.168 Sum_probs=96.6
Q ss_pred CCCccchhhhhhHHHHHHHHH--hhcCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCC-HHHHHHHcCC
Q 007790 42 PSKIHTESDSLSQERVADQIA--SVLDRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWN-PLQEAVCRRN 118 (589)
Q Consensus 42 ~~~l~tAl~~~~~e~~~~lI~--a~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~T-PLh~A~~~G~ 118 (589)
.++++.|+.....+.+..++. ++++.+|. .|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|+
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~ 90 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC
Confidence 356667777777777888887 57888897 9999999985 99999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHhcCchhHHhhcCCchhHHHHHhhc
Q 007790 119 SDIALILLKLHHRSAWAKWRRRLPRVISVLRRM 151 (589)
Q Consensus 119 ~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~ 151 (589)
.+++++|+++|++++..+..|.||+++|+....
T Consensus 91 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 123 (156)
T 1bi7_B 91 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH 123 (156)
T ss_dssp HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCH
Confidence 999999999999999999999999999986543
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.50 E-value=2.9e-16 Score=167.28 Aligned_cols=119 Identities=11% Similarity=0.011 Sum_probs=66.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC---C----CCccchhhhhhHHHHHHHHHhh-----cCCCCCCCCCCH
Q 007790 9 EDYSHSPVHYAIVLGDHTTLTRIISTLPRLAAD---P----SKIHTESDSLSQERVADQIASV-----LDRRDVPFRETP 76 (589)
Q Consensus 9 D~~G~TPLH~Aa~~G~~e~vk~LL~~Gadin~~---~----~~l~tAl~~~~~e~~~~lI~a~-----ln~~D~~~G~TP 76 (589)
+..+.||||+||..|+.++|++||+.|+..... + ++++.|+..+..+.+..++... .+..+. . .||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~-~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE-N-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH-H-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC-C-CCH
Confidence 456679999999999999999999998732111 1 2333333444444444444422 122221 1 555
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCc--ccCCCCCHHHHHH-HcCCHHHHHHHHHhc
Q 007790 77 LHLAVRLNDAFAARSLASAGADVSL--QNAAGWNPLQEAV-CRRNSDIALILLKLH 129 (589)
Q Consensus 77 LHlAv~~g~~e~vklLL~~GADvn~--~d~~G~TPLh~A~-~~G~~eiv~lLL~~g 129 (589)
||+||..|+.+++++|+++|++++. .|..|+||||+|+ ..|+.++|++|+++|
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 5555555555555555555555554 5555555555555 555555555555544
No 110
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.45 E-value=8.2e-14 Score=121.13 Aligned_cols=87 Identities=21% Similarity=0.134 Sum_probs=78.4
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHH
Q 007790 66 DRRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVI 145 (589)
Q Consensus 66 n~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlll 145 (589)
...|. .|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++
T Consensus 18 ~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGS-DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----C-CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 44565 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccc
Q 007790 146 SVLRRMRD 153 (589)
Q Consensus 146 A~l~~~~D 153 (589)
|+.....+
T Consensus 97 A~~~~~~~ 104 (110)
T 2zgd_A 97 SIDNGNED 104 (110)
T ss_dssp HHHHTCHH
T ss_pred HHHcCCHH
Confidence 98765443
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.42 E-value=1.8e-13 Score=150.18 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=96.2
Q ss_pred CccchhhhhhHHHHHHHHH--hhcCCC------CCCCCCCHHHHHHH---cCCHHHHHHHHHCCCCCCcccCCCCCHHHH
Q 007790 44 KIHTESDSLSQERVADQIA--SVLDRR------DVPFRETPLHLAVR---LNDAFAARSLASAGADVSLQNAAGWNPLQE 112 (589)
Q Consensus 44 ~l~tAl~~~~~e~~~~lI~--a~ln~~------D~~~G~TPLHlAv~---~g~~e~vklLL~~GADvn~~d~~G~TPLh~ 112 (589)
.++.|+.....+.+..++. +++|.. |. .|+||||+||. .|+.+++++||++|||+|.+|..|+||||+
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~-~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCC-SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHhccCHHHHHHHHhhcccccCCCCCccccc-ccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 3666777777777888877 556655 76 89999999977 899999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 113 AVCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 113 A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 254 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999998764443
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.41 E-value=1.4e-13 Score=119.61 Aligned_cols=83 Identities=24% Similarity=0.226 Sum_probs=78.3
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhHHhhcCCchhHHH
Q 007790 67 RRDVPFRETPLHLAVRLNDAFAARSLASAGADVSLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAWAKWRRRLPRVIS 146 (589)
Q Consensus 67 ~~D~~~G~TPLHlAv~~g~~e~vklLL~~GADvn~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA 146 (589)
.+|. .|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|
T Consensus 4 ~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSK-DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSC-SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3566 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 007790 147 VLRR 150 (589)
Q Consensus 147 ~l~~ 150 (589)
+...
T Consensus 83 ~~~~ 86 (115)
T 2l6b_A 83 KKNG 86 (115)
T ss_dssp HTTT
T ss_pred HHCC
Confidence 7653
No 113
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.41 E-value=3.3e-13 Score=138.92 Aligned_cols=108 Identities=18% Similarity=0.119 Sum_probs=92.1
Q ss_pred ccchhhhhhHHHHHHHHH--hhcCC------CCCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCcccCCCCCHHHHH
Q 007790 45 IHTESDSLSQERVADQIA--SVLDR------RDVPFRETPLHLAVRL---NDAFAARSLASAGADVSLQNAAGWNPLQEA 113 (589)
Q Consensus 45 l~tAl~~~~~e~~~~lI~--a~ln~------~D~~~G~TPLHlAv~~---g~~e~vklLL~~GADvn~~d~~G~TPLh~A 113 (589)
++.|+.....+.+..++. .+++. .|. .|+||||+||.. |+.+++++||++|++++.+|..|+||||+|
T Consensus 155 L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A 233 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 233 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCS-CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH
T ss_pred HhhhhhccCHHHHHHHHhcCCcccccCCCcccCC-CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 444445555555666665 45555 576 899999999998 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhcCchhHHhhcCCchhHHHHHhhccc
Q 007790 114 VCRRNSDIALILLKLHHRSAWAKWRRRLPRVISVLRRMRD 153 (589)
Q Consensus 114 ~~~G~~eiv~lLL~~ga~~~~~~~~g~tPlllA~l~~~~D 153 (589)
+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 234 ~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 234 ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999998764443
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.28 E-value=4.1e-13 Score=142.94 Aligned_cols=135 Identities=8% Similarity=-0.069 Sum_probs=106.8
Q ss_pred ChHHHHHHH-cCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhc-----CCCCCCCCCCHHHHHHHcCCH
Q 007790 13 HSPVHYAIV-LGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVL-----DRRDVPFRETPLHLAVRLNDA 86 (589)
Q Consensus 13 ~TPLH~Aa~-~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~l-----n~~D~~~G~TPLHlAv~~g~~ 86 (589)
.+++++|+. .++.+++++|+++|.+.+ +++|.|+..+..+.+..++.... +..|. .|.||||+||..|+.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~~~---T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~-~~~tpL~~Aa~~G~~ 141 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIKSE---VICFVAAITGCSSALDTLCLLLTSDEIVKVIQA-ENYQAFRLAAENGHL 141 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCCHH---HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CH-HHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCCcC---CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhcc-CCCCHHHHHHHcCCH
Confidence 457888877 578899999999987652 56677777777777777776322 23344 688999999999999
Q ss_pred HHHHHHHHCCCCC---CcccCCCCCHHHHHHHcCCHHHHHHHHHhcCchhH--HhhcCCchhHHHH-Hhhcc
Q 007790 87 FAARSLASAGADV---SLQNAAGWNPLQEAVCRRNSDIALILLKLHHRSAW--AKWRRRLPRVISV-LRRMR 152 (589)
Q Consensus 87 e~vklLL~~GADv---n~~d~~G~TPLh~A~~~G~~eiv~lLL~~ga~~~~--~~~~g~tPlllA~-l~~~~ 152 (589)
++|++|+++|+|+ +..+.. +||||+|+..|+.++|++|+++|++++. .+..|.||+++|+ .....
T Consensus 142 eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~ 212 (376)
T 2aja_A 142 HVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 212 (376)
T ss_dssp HHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred HHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH
Confidence 9999999999863 333333 9999999999999999999999999887 8888999999998 65433
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=46.29 E-value=34 Score=36.17 Aligned_cols=63 Identities=19% Similarity=0.122 Sum_probs=44.3
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCccchhhhhhHHHHHHHHHhhcCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 007790 18 YAIVLGDHTTLTRIISTLPRLAADPSKIHTESDSLSQERVADQIASVLDRRDVPFRETPLHLAVRLNDAFAARSLAS 94 (589)
Q Consensus 18 ~Aa~~G~~e~vk~LL~~Gadin~~~~~l~tAl~~~~~e~~~~lI~a~ln~~D~~~G~TPLHlAv~~g~~e~vklLL~ 94 (589)
..|..|+...|+.-|..|.+++-.-+....++ -...+.-| .|.|.+|+|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~l------------ln~~~af~--~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRL------------LNRPSAFD--VGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHH------------HCCTTTCC--TTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHH------------hCCCcccc--cCchhhhhhhhhhhhhHHHHhhh
Confidence 34577999999999999988844332211111 11223444 49999999999999999999987
Done!