BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007797
(589 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 190/319 (59%), Gaps = 57/319 (17%)
Query: 228 SMMTVGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSG 287
S++TVG SHCGSNQ S+ ++ +S S+R K E TSS G SG
Sbjct: 146 SVITVGPSHCGSNQ-----------STNIHQATTLPVSMSDRSKN-VEERLDTSSGGSSG 193
Query: 288 SSFNRTSKQSTGDNS--LKRKSRDAVDSECQSEA---AGFESG----AGNKTAQRSGSCR 338
S+ R +K++ S + RK + +D++ +S + G S GNK++QRSGS R
Sbjct: 194 CSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTR 253
Query: 339 RSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMW 398
RSRAAEVHNLSERRRRDRINE+M+ALQELIPHC++TDKAS+LDEAI+YLKSLQ+QLQVMW
Sbjct: 254 RSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMW 313
Query: 399 MGSGM--------APLMFPGMQH--YMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSM 448
MGSGM +P+MFPG+Q Y+++M M + M S+ P++++S
Sbjct: 314 MGSGMAAAAAAAASPMMFPGVQSSPYINQMAM----------QSQMQLSQFPVMNRS--- 360
Query: 449 AQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHP--------MQ-ANSQPMNM 499
A + ++CQ NPV Q Q QN +EQ ARYMG P MQ QP +M
Sbjct: 361 APQNHPGLVCQ----NPVQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPADM 416
Query: 500 FRFGSPTMQNQIVSLPSSS 518
FGSP +S P+++
Sbjct: 417 LGFGSPAGPQSQLSAPATT 435
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 10 MNPCIPDWNFEGDIPISNQMKPMGQDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQ 69
M DWNFE + +S + + ++ELVELLW++G VVL SQA +R+PS+ +Q
Sbjct: 1 MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQA--RREPSVQVQTHKQ 58
Query: 70 VQKQTLRGSGSC--GNSSNL-------IQDDETVSWIHCPIEDSFE 106
+TLR + N + + D ETVSWI P +D +
Sbjct: 59 ---ETLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVID 101
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 177/324 (54%), Gaps = 47/324 (14%)
Query: 216 SGNLTQGEVRECSMMTVGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETI 275
S + + E+ + S+ TVG SHCGSN DLD+S + N + + ++P+ +
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKN--IEEKLNPNASSSSGGS 202
Query: 276 EPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSG 335
+S + T D KRK + D E+ GNK+ QRSG
Sbjct: 203 SGCSFGKDIKEMAS----GRCITTDR--KRKRINHTD-----ESVSLSDAIGNKSNQRSG 251
Query: 336 SCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 395
S RRSRAAEVHNLSERRRRDRINE+M+ALQELIPHC+KTDKAS+LDEAI+YLKSLQLQLQ
Sbjct: 252 SNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQ 311
Query: 396 VMW------MGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSMA 449
VMW + AP+MFPG+Q + + +P+ R P++DQS A
Sbjct: 312 VMWMGSGMAAAAASAPMMFPGVQPQQF----------IRQIQSPVQLPRFPVMDQS---A 358
Query: 450 QAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHP-MQANS--QPMNMFRFGSPT 506
N ++CQ NPV QN ++++ARY+G P MQA + QPM M RF SP
Sbjct: 359 IQNNPGLVCQ----NPV------QNQIISDRFARYIGGFPHMQAATQMQPMEMLRFSSPA 408
Query: 507 MQNQIVSLPSSSCVPFSGGAATDN 530
Q PSS + G+ D+
Sbjct: 409 GQQS--QQPSSVPTKTTDGSRLDH 430
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 17 WNFEGDIPISNQMKPMGQDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLR 76
W+FE + +S + + +ELVELLW++G VVL SQ H E Q QKQ
Sbjct: 6 WSFEENYSLSTNRRSIRPQDELVELLWRDGQVVLQSQT---------HREQTQTQKQD-- 54
Query: 77 GSGSCGNSSNLIQDDETVSWI-HCPIEDSFE-KDFYSQLFSELPP 119
SS ++D ETVSWI + P ED FE DF S FS + P
Sbjct: 55 HHEEALRSSTFLEDQETVSWIQYPPDEDPFEPDDFSSHFFSTMDP 99
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 241/517 (46%), Gaps = 106/517 (20%)
Query: 10 MNPCIPDWNFEGDIPISNQ-----------MKPMGQDNELVELLWQNGHVVLSSQAQTQR 58
M+ +PD++ + D ++N + MG+D++L+ELLWQNG VV+ +Q +
Sbjct: 1 MHHFVPDFDTDDDY-VNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVVQNQRLHTK 59
Query: 59 KPSLNHNEPRQVQKQTLRGSGSCGNSSNLIQDDETVSWIHCPIEDSFEKDFYSQL-FSEL 117
KPS + P ++ + + IQ+DE SW+H P+ D DF S L FS
Sbjct: 60 KPS---SSPPKLLPSMDPQQQPSSDQNLFIQEDEMTSWLHYPLRDD---DFCSDLLFSA- 112
Query: 118 PPSGPMEVDKHTRQLREEKMVKFDPPGAVTSSQHPNVNHSVVPELQRNAMPPPRFEVHDA 177
T ++ PP + T+ P V RN M
Sbjct: 113 -------APTATATATVSQVTAARPPVSSTNESRPPV---------RNFM---------- 146
Query: 178 APQNKNLGDLGKLVNFSQSTAPPKGELGPCSGQFDRKRSGN----LTQGEVRECSMMT-- 231
NFS+ G F+ R G L++ VRE + ++
Sbjct: 147 --------------NFSR-----------LRGDFNNGRGGESGPLLSKAVVRESTQVSPS 181
Query: 232 ----VGSSHCGSNQVAYDLDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSG 287
+S G + D S + G + K ++ + IE T TSSS S
Sbjct: 182 ATPSAAASESGLTRRTDGTDSSAVAGGGAYNRKGKAVAMT----APAIEITGTSSSVVSK 237
Query: 288 SSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHN 347
S + T + KRK R+A ++ ++E+ E+ + + S +RSRAAEVHN
Sbjct: 238 SEIE---PEKTNVDDRKRKEREATTTD-ETESRSEETKQARVS---TTSTKRSRAAEVHN 290
Query: 348 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMAPLM 407
LSER+RRDRINE+M+ALQELIP CNK+DKASMLDEAIEY+KSLQLQ+Q+M MG GM P+M
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMM 350
Query: 408 FPGMQHYMSRMGMGMG-----PPPLPSVTNPMHFSRVPLVDQS--------MSMAQAQNR 454
+PGMQ YM M MGMG PPP M ++ PL Q+ + +
Sbjct: 351 YPGMQQYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYPVHASDPS 410
Query: 455 AVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQ 491
V +P + Q Q + +T+ Y ++ G HP Q
Sbjct: 411 RVFVPNQQYDPTSGQPQYP-AGYTDPYQQFRGLHPTQ 446
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 207/411 (50%), Gaps = 49/411 (11%)
Query: 36 NELVELLWQNGHVVLSSQAQTQRK---PSLNHNEPRQVQKQTLRGSGSCGNS-------- 84
+E+VEL+W+NG + SQ+ R P N + R++ G+GS
Sbjct: 27 DEVVELVWENGQISTQSQSSRSRNIPPPQANSSRAREI------GNGSKTTMVDEIPMSV 80
Query: 85 ----SNLIQDDETVSWI-HCPIEDSFEKDFYSQLFSELPPS---GPMEVDKHTRQLREEK 136
+ L QDD+ V W+ H P D + DF + S + + M V++ L + +
Sbjct: 81 PSLMTGLSQDDDFVPWLNHHPSLDGYCSDFLRDVSSPVTVNEQESDMAVNQTAFPLFQRR 140
Query: 137 MVKFDPPGAVTSSQHPNV-NHSVVPELQRNAMP-----PPRFEVHDAAPQNKNLGDLGKL 190
+ A +SSQ+ +HS+ + +P P RF N L
Sbjct: 141 KDGNESAPAASSSQYNGFQSHSLYGSDRARDLPSQQTNPDRFTQTQEPLITSNKP---SL 197
Query: 191 VNFSQSTAPPKGELGPCSGQFDRKRSGNLTQGEVRECSMMTVGSSHCGSNQVAYDLDMSR 250
VNFS P + D K + V + ++ S ++V L+ S
Sbjct: 198 VNFSHFLRPATFAKTTNNNLHDTKEKSPQSPPNVFQTRVLGAKDSE---DKV---LNESV 251
Query: 251 ASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDA 310
AS++ ++ +IS K + E V SS GSG+S + S+ + SLKRK +
Sbjct: 252 ASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLDGPSESPSL--SLKRKHSNI 309
Query: 311 VDSECQSEAAGFESGAGNKTA--QRSG-SCRRSRAAEVHNLSERRRRDRINEKMRALQEL 367
D +C SE ESG G K A R+G +RSR+AEVHNLSERRRRDRINEKMRALQEL
Sbjct: 310 QDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQEL 369
Query: 368 IPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSG--MAP-LMF-PGMQHY 414
IP+CNK DKASMLDEAIEYLKSLQLQ+Q+M M SG + P +MF PGM HY
Sbjct: 370 IPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGMGHY 420
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 191/428 (44%), Gaps = 103/428 (24%)
Query: 25 ISNQMKPMGQDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLRGSGSCGNS 84
IS + MG+D+ +VELL ++ VV SSQ QT PS + P + LRGSGS
Sbjct: 15 ISPEKYIMGEDD-IVELLGKSSQVVTSSQTQT---PSCD---PPLI----LRGSGSGDGE 63
Query: 85 SN----------------LIQDDETVSWIHCPIEDSFEKDFYSQLFSELPPSGPMEVDKH 128
N IQ+DE SW+H P + L+S+L SG
Sbjct: 64 GNGPLPQPPPPLYHQQSLFIQEDEMASWLHQPNRQDY-------LYSQLLYSG------- 109
Query: 129 TRQLREEKMVKFDPPGAVTSSQHPNVNHSVVPELQRNAMPPPRFEVHDAA--PQNKNLGD 186
+S HP S+ P PPPR + AA P L +
Sbjct: 110 ------------------VASTHPQSLASLEPP------PPPRAQYILAADRPTGHILAE 145
Query: 187 LGKLVNFSQSTAPPKGELGPCSGQFDRKRSGNLTQGEVREC-SMMTVGSSHCGSNQVAYD 245
+ NF R+R GN+ G V S T+ SS S +
Sbjct: 146 R-RAENFMN---------------ISRQR-GNIFLGGVEAVPSNSTLLSSATESIPATHG 188
Query: 246 LDMSRASSSGLNDDVRKVISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSL-- 303
+ SRA+ +G V RGK IE T S G + +Q + +
Sbjct: 189 TE-SRATVTGGVSRTFAVPGLGPRGKAVAIETAGTQSWGLCKAETEPVQRQPATETDITD 247
Query: 304 --KRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKM 361
KRK+R+ + E Q G + A+ S S +RSRAA +H LSERRRR +INE M
Sbjct: 248 ERKRKTREETNVENQ----------GTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMM 297
Query: 362 RALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMA-PLMFPG--MQHYMSRM 418
+ALQEL+P C KTD++SMLD+ IEY+KSLQ Q+Q+ MG M P+M+ G Q YM M
Sbjct: 298 KALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHM 357
Query: 419 GMGMGPPP 426
MGM PP
Sbjct: 358 AMGMNRPP 365
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 90/145 (62%), Gaps = 9/145 (6%)
Query: 285 GSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQ-----RSGSCRR 339
S S F+R + + SLKRK D + E + + + + Q R +R
Sbjct: 168 ASSSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKR 227
Query: 340 SRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWM 399
R+ EVH L ER+RRD N+KMRALQ+L+P+C K DKAS+LDEAI+Y+++LQLQ+Q+M M
Sbjct: 228 KRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
Query: 400 GSGMA--PLMFPGMQHYMSRMGMGM 422
G+G+ P M P M HY S MG+GM
Sbjct: 288 GNGLIRPPTMLP-MGHY-SPMGLGM 310
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 93/171 (54%), Gaps = 26/171 (15%)
Query: 269 RGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGN 328
+GK +E T SSG + Q ++ LK + E G
Sbjct: 199 KGKAVAVEAAGTPSSGVCKAETEPVQIQPATESKLKAR----------------EETHGT 242
Query: 329 KTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLK 388
+ A+ S S +RSR AE+HNL+ERRRR++INEKM+ LQ+LIP CNK+ K S LD+AIEY+K
Sbjct: 243 EEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 389 SLQLQLQVMWMGSGMAPLMFPG-MQHYMSRMGMGMGPP----PLPSVTNPM 434
SLQ Q+Q M M+P+M G Q +M M M M P P P + PM
Sbjct: 303 SLQSQIQGM-----MSPMMNAGNTQQFMPHMAMDMNRPPPFIPFPGTSFPM 348
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 30/105 (28%)
Query: 34 QDNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLRGSGSCGNSSN------- 86
+++++VELLWQ+G VV ++Q Q +++ P LRGSGS N
Sbjct: 18 REDDIVELLWQSGQVVGTNQTHRQ-----SYDPP-----PILRGSGSGRGEENAPLSQPP 67
Query: 87 --------LIQDDETVSWIHCPIEDSFEKDFY-SQLFSELPPSGP 122
IQ+ E SW+H S+ ++++ S+L + P + P
Sbjct: 68 PHLHQQNLFIQEGEMYSWLH----HSYRQNYFCSELLNSTPATHP 108
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
Query: 314 ECQSEAAGF----ESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIP 369
+C+SE G E+ + S +R RAAEVHNLSE+RRR RINEKM+ALQ LIP
Sbjct: 166 DCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIP 225
Query: 370 HCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSG--MAPLMFPG 410
+ NKTDKASMLDEAIEYLK LQLQ+Q++ M +G + PL PG
Sbjct: 226 NSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPG 268
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 96/175 (54%), Gaps = 27/175 (15%)
Query: 327 GNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 386
G + A+ S S +RSRAAE+HNL+ERRRR++INE+M+ LQ+LIP CNK+ K SML++ IEY
Sbjct: 136 GTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEY 195
Query: 387 LKSLQLQLQV----MWMGSGMAPLMFP-GMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPL 441
+KSL++Q+ M MG P P Q +M+ +G PP P F +
Sbjct: 196 VKSLEMQINQFMPHMAMGMNQPPAYIPFPSQAHMAGVGPSYPPPRYP-------FPNIQT 248
Query: 442 VDQSMSMAQAQNRAVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQANSQP 496
D S V Q+ NPV+ Q QM Y +++G H MQ + P
Sbjct: 249 FDPS---------RVWLQSPQPNPVSNQPQM------NPYGQFVGHHQMQQSLPP 288
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 331 AQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSL 390
A++ S +R+ A+ HNLSE++RR +INEKM+ALQ+LIP+ NKTDKASMLDEAIEYLK L
Sbjct: 83 AKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 142
Query: 391 QLQLQVMWM--GSGMAPLMFP 409
QLQ+Q + + G G+ P+ P
Sbjct: 143 QLQVQTLAVMNGLGLNPMRLP 163
>sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119
PE=2 SV=2
Length = 544
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 133/257 (51%), Gaps = 33/257 (12%)
Query: 269 RGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKR-KSRDAVDSECQSEAAGFESGAG 327
RGK E TS SG + + R Q + + K R+ +E Q G
Sbjct: 294 RGKEVATETAGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQ----------G 343
Query: 328 NKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYL 387
+ A S S +RSRAA++HNLSERRRR+RINE+M+ LQEL+P C KTDK SML++ IEY+
Sbjct: 344 TEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYV 403
Query: 388 KSLQLQLQVMWMGSGMAPLMFP--GMQHYMSRMGMGMG----PP---PLPSVT--NPMHF 436
KSLQLQ+Q+M MG GM P M Q +M M MGM PP P P T P H
Sbjct: 404 KSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMAMGMKGMNRPPPFVPFPGKTFPRPGHM 463
Query: 437 SRV----PLVDQSMSMAQAQNRAVMCQASVL-NPVNYQNQMQNSNFTEQYARYMGFHPMQ 491
+ V P + QA + + + S+ NPV NQ + + Y++++G H MQ
Sbjct: 464 AGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPV--PNQPRFPAYINPYSQFVGLHQMQ 521
Query: 492 ANSQPMNMFRFGSPTMQ 508
P+ G PT Q
Sbjct: 522 QPPLPLQ----GQPTSQ 534
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 35 DNELVELLWQNGHVVLSSQAQTQRKPSLNHNEPRQVQKQTLRGSGSCGNSSN--LIQDDE 92
++++VELLW++G VV S Q Q P + ++T+ S IQ+DE
Sbjct: 108 EDDVVELLWKSGQVVQSIQTQRPIPPPIFRGSGSGGGEETVLPLPPLHPSHQNIFIQEDE 167
Query: 93 TVSWIHCPIEDSFEKDFYS 111
SW++ P+ +D++S
Sbjct: 168 MASWLYHPL----RQDYFS 182
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 17/131 (12%)
Query: 267 SERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGA 326
S+R +T + TS+S GS DN++ D DS C S +
Sbjct: 156 SQRLTMDTYDVGFTSTSMGSH------------DNTI-----DDHDSVCHSRPQMEDEEE 198
Query: 327 GNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEY 386
+ S S +RSRAA +HN SER+RRD+IN++M+ LQ+L+P+ +KTDKASMLDE IEY
Sbjct: 199 KKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEY 258
Query: 387 LKSLQLQLQVM 397
LK LQ Q+ +M
Sbjct: 259 LKQLQAQVSMM 269
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 53/63 (84%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 396
RR +A + H+++ER RR+RI E+M+ALQEL+P+ NKTDKASMLDE I+Y+K LQLQ++V
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199
Query: 397 MWM 399
+ M
Sbjct: 200 LSM 202
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Query: 313 SECQSEAAGFESGAGNKTAQRSGS----CRRSRAAEVHNLSERRRRDRINEKMRALQELI 368
++ QS+A + G TAQ RR +A + H+++ER RR+RI E+M++LQEL+
Sbjct: 105 TQTQSQATA-SATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELV 163
Query: 369 PHCNKTDKASMLDEAIEYLKSLQLQLQVMWM 399
P+ NKTDKASMLDE I+Y+K LQLQ++V+ M
Sbjct: 164 PNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 53/63 (84%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 396
RR +A + H+++ER RR+RI E+M++LQEL+P+ NKTDKASMLDE IEY++ LQLQ++V
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 397 MWM 399
+ M
Sbjct: 161 LSM 163
>sp|Q8L5W7|PIF6_ARATH Transcription factor PIF6 OS=Arabidopsis thaliana GN=PIF6 PE=1 SV=1
Length = 363
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 333 RSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQL 392
R +R R AE +N ER +R+ IN+KMR LQ L+P+ +K D SMLDEAI Y+ +LQL
Sbjct: 180 RKALVKRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQL 239
Query: 393 QLQVMWMGSGMAP--LMFPGMQHYMSRMGMGMG 423
Q+Q+M MG+ +M P +Y S+MG+ MG
Sbjct: 240 QVQMMTMGNRFVTPSMMMPLGPNY-SQMGLAMG 271
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 82/141 (58%), Gaps = 15/141 (10%)
Query: 278 TVTSSSGGSGSSF-----NRTSKQS-TGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTA 331
+VT+S+ G+ S+ R+ K + TGD R + D+E + E+G N
Sbjct: 105 SVTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSN--- 161
Query: 332 QRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQ 391
RR RAA +HN SERRRRDRIN++MR LQ+L+P +K DK S+LD+ IE+LK LQ
Sbjct: 162 -----GRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQ 216
Query: 392 LQLQVMWMGSGM-APLMFPGM 411
Q+Q M + + + +M P +
Sbjct: 217 AQVQFMSLRANLPQQMMIPQL 237
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
PE=2 SV=1
Length = 286
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 264 ISPSERGKTETIEPTVTSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFE 323
+ +E +E + T +++ GS S + S N+ K + R A +S E G E
Sbjct: 57 VDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKE--GVE 114
Query: 324 SGAGNKTAQRSGS------------CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 371
K Q+ GS RR +A + H+L+ER RR++I+E+MR LQ L+P C
Sbjct: 115 GRKSKK--QKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGC 172
Query: 372 NK-TDKASMLDEAIEYLKSLQLQLQVMWMG-SGMAPLMF 408
+K T KA MLDE I Y+++LQ Q++ + M + ++P+++
Sbjct: 173 DKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVY 211
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
SV=1
Length = 390
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 280 TSSSGGSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGS--- 336
+ SSGG+G + + S+ S K++ R D E + + + + A ++ S
Sbjct: 152 SQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQ 211
Query: 337 -------------CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDE 382
RR +A H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE
Sbjct: 212 PSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDE 271
Query: 383 AIEYLKSLQLQLQVMWMG-SGMAPLMFPGMQHYMSRMGMGMGPPPLP 428
I Y++SLQ Q++ + M S + P++ ++ +++ + P P
Sbjct: 272 IINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFP 318
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 10/96 (10%)
Query: 323 ESGAGNKTAQRSGSCRRSRAAEV--HNLSERRRRDRINEKMRALQELIPHCNKTDKASML 380
E G +K +G R SR A +L R+RR+RINE++R LQ L+P+ K D ++ML
Sbjct: 223 EDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTML 282
Query: 381 DEAIEYLKSLQLQLQV-----MWMGSGMAPLMFPGM 411
+EA++Y+K LQLQ+++ +WM AP+ + GM
Sbjct: 283 EEAVQYVKFLQLQIKLLSSDDLWM---YAPIAYNGM 315
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
SV=1
Length = 366
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A H+L+ER RR++I+E+MR LQEL+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 396 VMWM 399
+ M
Sbjct: 268 FLSM 271
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Query: 312 DSECQSEAAGFESGAG-----NKTAQRSGSCRRSRAAEV--HNLSERRRRDRINEKMRAL 364
+S C + G E + +K +G R SR A +L R+RR+RINE++R L
Sbjct: 236 ESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 295
Query: 365 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQV-----MWMGSGMAPLMFPGM 411
Q L+P+ K D ++ML+EA+ Y+K LQLQ+++ +WM AP+ F GM
Sbjct: 296 QNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM---YAPIAFNGM 344
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
Length = 292
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 8/75 (10%)
Query: 349 SERRRRD-RINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGMAPLM 407
S+RRRRD +++ KMR LQ+L+P+C+KTDK S+LD+ IEY+K+LQLQLQ+M G+ P
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMM-STVGVNPYF 199
Query: 408 FPGMQHYMSRMGMGM 422
P +G GM
Sbjct: 200 LPAT------LGFGM 208
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 396 VMWMG-SGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSRVPLVDQSMSMAQAQNR 454
+ M S + + M +S+ PS N MH +V +D S +
Sbjct: 320 FLSMKLSSVNTRLDFNMDALLSK-------DIFPSSNNLMHHQQVLQLDSSAETLLGDHH 372
Query: 455 AVMCQASVLNPVNYQNQMQNSNFTEQYARYMGFHPMQAN 493
Q LNP N + N T + ++ P A+
Sbjct: 373 NKNLQ---LNPDISSNNVINPLETSETRSFISHLPTLAH 408
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A H+L+ER RR++I+E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 305 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 364
Query: 396 VMWM 399
+ M
Sbjct: 365 FLSM 368
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR++I E+M+ LQ+L+P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 396 VMWM 399
+ M
Sbjct: 363 FLSM 366
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
SV=1
Length = 371
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR++I+E+M LQ+L+P CN+ T KA MLDE I Y++SLQ Q++
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252
Query: 396 VMWM 399
+ M
Sbjct: 253 FLSM 256
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
Length = 343
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 30/196 (15%)
Query: 235 SHCGSNQVAYDLDMSRAS-------SSGLNDDVRKVISPS-ERGKTETIEPTVTSSSGGS 286
S G NQ D D++ A+ S L+ V + IS + +R + E+ + S+ G S
Sbjct: 36 SFVGPNQFG-DADLTTAANGDPARMSHALSQAVIEGISGAWKRREDESKSAKIVSTIGAS 94
Query: 287 GSSFNRTSKQSTGDNSLKRKSRDAV-DSECQSEAAGFESGAGNKTAQRSGS-----CRRS 340
G+N KR+ D V D + ++E+ G E+ + + + RR
Sbjct: 95 -----------EGEN--KRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRG 141
Query: 341 RAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQVMWM 399
+A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 142 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 201
Query: 400 G-SGMAPLMFPGMQHY 414
+ M PG++ +
Sbjct: 202 KLEAVNSRMNPGIEVF 217
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
SV=1
Length = 335
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+++ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++SLQ Q++
Sbjct: 174 ARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIE 233
Query: 396 VMWM 399
+ M
Sbjct: 234 FLSM 237
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR++I+EKM ALQ++IP CNK KA +LDE I Y++SLQ Q++
Sbjct: 155 ARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVE 214
Query: 396 VMWM 399
+ M
Sbjct: 215 FLSM 218
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
SV=1
Length = 304
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR A + H+L+ER RR++I++KM+ LQ+++P CNK T KA MLDE I Y++SLQ Q++
Sbjct: 143 ARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE 202
Query: 396 VMWM 399
+ M
Sbjct: 203 FLSM 206
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 18/138 (13%)
Query: 285 GSGSSFNRTSKQSTGDNSLKRKSRDAVDSECQSEAAGFE---------SGAGNKTAQRSG 335
G G F R G S KR S D VD+ C S F S T+ R
Sbjct: 89 GKGPGFLRPEG---GHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPSAPHQPTSIRPR 145
Query: 336 -SCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQL 394
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+M+DE ++Y+K L+LQ+
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQV 205
Query: 395 QVMWM----GSG-MAPLM 407
+V+ M G+G +APL+
Sbjct: 206 KVLSMSRLGGAGAVAPLV 223
>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
SV=3
Length = 337
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR++I++KM+ LQ+++P CNK T KA MLDE I Y++ LQ Q++
Sbjct: 187 ARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE 246
Query: 396 VMWM 399
+ M
Sbjct: 247 FLSM 250
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 306 KSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQ 365
+S + +S +A G S K+ +R R A++ +L R+RR+RIN++++ LQ
Sbjct: 104 QSLSSYNSSDDEKALGLVSNTS-KSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQ 162
Query: 366 ELIPHCNKTDKASMLDEAIEYLKSLQLQLQV-----MWMGSGMAPLMFPGM 411
L+P+ K D ++ML++A+ Y+K LQLQ+++ +WM APL G+
Sbjct: 163 SLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWM---YAPLAHNGL 210
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 9/125 (7%)
Query: 292 RTSKQSTGDNSLKRKSRDAVDSECQSEAAGFESGAGNKTAQRSGSCRRSRAAEVHNLSER 351
+ + S+ N++ + + VD + S ++ E + ++ + + + A + +L R
Sbjct: 125 KKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGT-ATDPQSLYAR 183
Query: 352 RRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV-----MWMGSGMAPL 406
+RR++INE+++ LQ L+P+ K D ++ML+EA+ Y+K LQLQ+++ +WM APL
Sbjct: 184 KRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM---YAPL 240
Query: 407 MFPGM 411
+ G+
Sbjct: 241 AYNGL 245
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
SV=1
Length = 261
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+++ER RR +INE+++ LQ+++P C KT A+MLDE I Y++SLQ Q++
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208
Query: 396 VMWM 399
+ M
Sbjct: 209 FLSM 212
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 15/123 (12%)
Query: 300 DNSLKRKSRDAVDSECQSEAAGFESGAGNKTA-----QRSG-----SCRRSRAAEVHNLS 349
D + KR D +D+ C S F ++ A Q+S RR +A + H+++
Sbjct: 99 DETGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIA 158
Query: 350 ERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWM----GSG-MA 404
ER RR+RI E++R+LQEL+P NKTD+A+M+DE ++Y+K L+LQ++V+ M G+G +A
Sbjct: 159 ERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVA 218
Query: 405 PLM 407
PL+
Sbjct: 219 PLV 221
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
SV=1
Length = 260
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR +INE++R LQ+++P C K A+MLDE I Y++SLQ Q++
Sbjct: 147 ARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVE 206
Query: 396 VMWM 399
+ M
Sbjct: 207 FLSM 210
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
SV=1
Length = 327
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTD-KASMLDEAIEYLKSLQLQLQ 395
RR +A + H+L+ER RR++IN +M+ LQEL+P C+K A +LDE I ++++LQ Q++
Sbjct: 187 ARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVE 246
Query: 396 VMWM 399
++ M
Sbjct: 247 MLSM 250
>sp|Q5XVH0|BH109_ARATH Transcription factor bHLH109 OS=Arabidopsis thaliana GN=BHLH109
PE=2 SV=1
Length = 185
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 338 RRSRAAEVHNLSERRRRDRINEKMRALQELIP-HCNKTDKASMLDEAIEYLKSLQLQLQV 396
+R R+ E + E++RR I +K+ LQ L+P HC K D AS L+ IEY+KSL+ Q+ V
Sbjct: 64 KRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVDV 123
Query: 397 MWMGSGMAPLMFP 409
M M P+ P
Sbjct: 124 MSMAYTTTPVYTP 136
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 395
+R +A + H+L+ER RR++INE+++ LQ+L+P C K A MLD I+Y++SLQ Q++
Sbjct: 106 AKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIE 165
Query: 396 VMWM 399
+ M
Sbjct: 166 FLSM 169
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 348 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 397
L+ + RR+RI+E+++ LQEL+P+ K D +ML++AI Y+K LQ+Q++V+
Sbjct: 214 LAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 346 HNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 395
H LSE++RR+++NE+ L+ +IP +K DK S+LD+ IEYL+ LQ ++Q
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ 455
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
+R A +++ER RR RI++++R LQEL+P+ +K T+ A ML+EA+EY+K LQ Q+Q
Sbjct: 186 AKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQ 245
Query: 396 VM 397
+
Sbjct: 246 EL 247
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 338 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQV 396
+R A +++ER RR RI++++R LQEL+P+ +K T+ A ML+EA+EY+K+LQ Q+Q
Sbjct: 184 KRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQE 243
Query: 397 M 397
+
Sbjct: 244 L 244
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
PE=1 SV=1
Length = 359
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 337 CRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 395
+R A +++ER RR RI+E+MR LQEL+P+ +K T+ + MLD A++Y+K LQ Q +
Sbjct: 281 AKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYK 340
Query: 396 VM 397
++
Sbjct: 341 IL 342
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 348 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 397
L+ + RR+RI+E+++ LQEL+P+ K D +ML++AI Y+K LQ+Q++V+
Sbjct: 208 LAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 325 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 384
G+ K +G R + H L+ER+RR ++NE++ AL L+P KTDKA++L++AI
Sbjct: 112 GSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAI 171
Query: 385 EYLKSLQ 391
++LK LQ
Sbjct: 172 KHLKQLQ 178
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 325 GAGNKTAQRSGSCRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAI 384
G G K S R A+ H L+ER+RR++++EK AL L+P K DK ++LD+AI
Sbjct: 99 GRGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158
Query: 385 EYLKSLQLQLQVMWMGSGMAPLMFPGMQHYMSRMGMGMGPPPLPSVTNPMHFSR-VPLVD 443
+K LQ QL+ + M + S++ P S + + F + +P ++
Sbjct: 159 SRMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIE 218
Query: 444 QSMSMAQAQNRAVMCQAS------VLNPV-NYQNQMQNS 475
+S R ++C+ S +LN + N+Q +++NS
Sbjct: 219 AKISQNDILIR-ILCEKSKGCMINILNTIENFQLRIENS 256
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 348 LSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 397
++ R+RR+RI+EK+R LQ L+P K D ASMLDEA YLK L+ Q++ +
Sbjct: 282 VAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,563,055
Number of Sequences: 539616
Number of extensions: 9521396
Number of successful extensions: 29424
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 267
Number of HSP's that attempted gapping in prelim test: 28113
Number of HSP's gapped (non-prelim): 1200
length of query: 589
length of database: 191,569,459
effective HSP length: 123
effective length of query: 466
effective length of database: 125,196,691
effective search space: 58341658006
effective search space used: 58341658006
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)