RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 007800
(589 letters)
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 204
Score = 136 bits (342), Expect = 1e-37
Identities = 99/201 (49%), Positives = 131/201 (65%), Gaps = 5/201 (2%)
Query: 390 PLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATL 449
PL + + ++ +L+ +T VIAETGDSWFN Q+++LP E++MQ+G IGWSV A
Sbjct: 2 PLVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAF 61
Query: 450 GYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPYNV 509
GYA A ++R I +GDGSFQ+TAQE++ M+R IIFLINN GYTIEV IHDGPYN
Sbjct: 62 GYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNN 121
Query: 510 IKNWDYTGLVNAI----HNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKD 565
IKNWDY GL+ G K ++ EL EA+K A D IE F+ ++
Sbjct: 122 IKNWDYAGLMEVFNGNGGYDSGAAKGLKAKTGGELAEAIKVAL-ANTDGPTLIECFIGRE 180
Query: 566 DTSKELLEWGSRVSAANSRPP 586
D ++EL++WG RV+AANSR P
Sbjct: 181 DCTEELVKWGKRVAAANSRKP 201
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 175
Score = 122 bits (307), Expect = 4e-33
Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 214 KVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGK 273
+ S++ L AAV+ T F+ K ++ G +R A A++A ++ DA G +A M + K
Sbjct: 1 EASDEASLNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAK 60
Query: 274 GLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIV 333
PE + +IGT WG VS + ++ ADA + + P+FNDYS+ G++ + +K ++
Sbjct: 61 SFFPEENALYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYSTTGWTDIPDPKKLVLA 120
Query: 334 QPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPP 379
+P V V NG V + D+L+ LA+K+ K T +L+ ++ +
Sbjct: 121 EPRSVVV-NGIRFPSVHLKDYLTRLAQKVSKKTGSLDFFKSLNAGE 165
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 116 bits (291), Expect = 1e-30
Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 388 NEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGA 447
+ PL+ ++ + + L VIAETG S F + P N Q+ +GSIG++ GA
Sbjct: 2 STPLKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGA 61
Query: 448 TLGYAQAA----KDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH 503
TLG A AA KRVI IGDGS Q+T QEISTMIR G + +F++NN GYTIE IH
Sbjct: 62 TLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIH 121
Query: 504 --DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVF 561
YN I+ WD+ L+ G T +V + E + + + + IE+
Sbjct: 122 GPKAQYNEIQGWDHLSLLPTF--GAKDYETHRVATTGEWDKLTQDKSFNDNSKIRMIEIM 179
Query: 562 VHKDDTSKELLEWG 575
+ D + L++
Sbjct: 180 LPVFDAPQNLVKQA 193
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 186
Score = 109 bits (272), Expect = 4e-28
Identities = 83/171 (48%), Positives = 115/171 (67%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
T+G +LA RLV+IG K F+V GD+NL LLD+L+ + V CCNELN G++A+GYAR+
Sbjct: 3 TVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARA 62
Query: 88 RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQ 147
+G A VVT++VG LS +AI GAY+ENLPVI I G PN+ND+ +LHH +G D+
Sbjct: 63 KGAAAAVVTYSVGALSAFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHY 122
Query: 148 ELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIP 198
+L + IT + + +A ID I TAL+E KPVY+ I+CN+ +P
Sbjct: 123 QLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKKPVYLEIACNIASMP 173
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 107 bits (268), Expect = 1e-27
Identities = 71/173 (41%), Positives = 102/173 (58%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
TLG++L RL ++ VF +PGDFNL+LLD + + G NELNA YAADGYAR
Sbjct: 4 TLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYARI 63
Query: 88 RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQ 147
+G+ + TF VG LS LN IAG+Y+E++ V+ +VG P+ + +LHHT+G DFT
Sbjct: 64 KGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFTV 123
Query: 148 ELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHP 200
R I+ + A++ ++ A ID I T +PVY+ + NL + P
Sbjct: 124 FHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVDLNVP 176
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 196
Score = 103 bits (256), Expect = 7e-26
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 388 NEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGA 447
+ L ++ +Q + ++A+ G S F LRLP + + Q +GSIG+++ A
Sbjct: 2 DGSLTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAA 61
Query: 448 TLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDGPY 507
G A ++RVI GDG+ Q+T QE+ +M+R Q II ++NN GYT+E IH
Sbjct: 62 AFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQ 121
Query: 508 NVIKNWDYTGLVNAIHNGE-GKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDD 566
+ + +V ++L + ++ + L IEV + K D
Sbjct: 122 RYNDIALWNWTHIPQALSLDPQSECWRVSEAEQLADVLEKVA--HHERLSLIEVMLPKAD 179
Query: 567 TSKELLEWGSRVSAANS 583
L + A N+
Sbjct: 180 IPPLLGALTKALEACNN 196
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 179
Score = 102 bits (254), Expect = 8e-26
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
Query: 207 VPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPI 266
P ++ K ++ + ++ + A PV++ + +L D T +P
Sbjct: 2 TPIDMSLKPNDAESEKEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPA 61
Query: 267 AIMPSGKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIK 326
+ P GKG + E HP + G Y G +S E VESAD + VG + +D+++ +S K
Sbjct: 62 FVTPMGKGSISEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLSDFNTGSFSYSYK 121
Query: 327 KEKAIIVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTALENYRRIYVPPGIPVKRA 386
+ + + + N + V M L L + A + Y+ + VP P A
Sbjct: 122 TKNIVEFHSDHMKIRNA-TFPGVQMKFVLQKLLTNIAD---AAKGYKPVAVPARTPANAA 177
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 161
Score = 99.4 bits (247), Expect = 5e-25
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 1/157 (0%)
Query: 212 APKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPS 271
++ L+A +A + L + + L+ + + A + A M
Sbjct: 6 KQAHADSACLKAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLM 65
Query: 272 GKGLVPEHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAI 331
GKG+ E F GTY G+ S+ E +E AD + VG F D + G++ + + I
Sbjct: 66 GKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFTDTLTAGFTHQLTPAQTI 125
Query: 332 IVQPHRVTVGNGPSLGWVFMADFLSALAKKLRKNTTA 368
VQPH VG+ G + M + L + +++ A
Sbjct: 126 EVQPHAARVGDVWFTG-IPMNQAIETLVELCKQHVHA 161
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 175
Score = 90.6 bits (224), Expect = 7e-22
Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
T G+ + VF PG L + D + + N V +E AG+ A+GYAR+
Sbjct: 5 TGGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYARA 64
Query: 88 RG-VGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFT 146
G G +VT G +V+ +A A+++ +P++ G ++ GT+ +
Sbjct: 65 SGKPGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADV------ 118
Query: 147 QELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK-PVYISISCNLPGIPHPTFARD 205
+ ++ T +V ++ + I+ A A PV + + ++ R+
Sbjct: 119 --VGISRSCTKWNVMVKSVEELPLRINEAFEIATSGRPGPVLVDLPKDVTAAI----LRN 172
Query: 206 PVP 208
P+P
Sbjct: 173 PIP 175
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 178
Score = 90.3 bits (223), Expect = 1e-21
Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
+ +L RL + GA +F VPGD+NL LDH+I P++ VGC NELNA YAADGYAR
Sbjct: 4 CVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYARC 63
Query: 88 RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQ 147
+G A + TF VG LS +N IAG+Y+E++PV+ IVG P + +LHHT+G +F
Sbjct: 64 KGFAALLTTFGVGELSAMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRH 123
Query: 148 ELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNL 194
+ IT +QAV+ +E ID ++T L+E +P Y+ + ++
Sbjct: 124 FYHMSEPITVAQAVLTEQNACYE-IDRVLTTMLRERRPGYLMLPADV 169
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 195
Score = 87.9 bits (217), Expect = 1e-20
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 16 APAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNEL 75
AP R GA + L L G + VF+ PG ++ + L + V +E
Sbjct: 7 APDQPRKGADI------LVEALERQGVETVFAYPGGASMEIHQALTRSSSIRNVLPRHEQ 60
Query: 76 NAGYAADGYARSRG-VGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNR 134
+AA+GYARS G G C+ T G ++++ +A A +++P++ I G GT+
Sbjct: 61 GGVFAAEGYARSSGKPGICIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDA 120
Query: 135 ILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK-PVYISISCN 193
+ ++IT +V ++ D +I+ A A PV + + +
Sbjct: 121 FQET--------PIVEVTRSITKHNYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKD 172
Query: 194 L 194
+
Sbjct: 173 I 173
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 228
Score = 66.1 bits (160), Expect = 8e-13
Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 3/203 (1%)
Query: 387 QNEPLRVNVLFKHIQDMLSGDTAVIAETGDSWFN-CQKLRLPENCGYEFQMQYGSIGWSV 445
Q PL+ + + + + D + GD N + L+L + + + ++G +
Sbjct: 2 QEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGI 61
Query: 446 GATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIHDG 505
+ +++V GDG +T Q+++T ++ I + N Y + +
Sbjct: 62 PGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGWIKDEQED 121
Query: 506 PY-NVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHK 564
N ++ + + +V ++L + + A + I+ +
Sbjct: 122 TNQNDFIGVEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLIDAVITG 181
Query: 565 DD-TSKELLEWGSRVSAANSRPP 586
D E L S +S+A
Sbjct: 182 DRPLPAEKLRLDSAMSSAADIEA 204
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 174
Score = 62.3 bits (150), Expect = 6e-12
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 10/165 (6%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPE-LNLVGCCNELNAGYAADGYAR 86
G + + L G ++ +PG +++D L AE + ++ + +E AA A+
Sbjct: 4 LAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAK 63
Query: 87 SRG-VGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF 145
G +G C + GG ++N + A +++PV+ ++G + +
Sbjct: 64 LTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEM------- 116
Query: 146 TQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISI 190
E + + N +ID AI A + I
Sbjct: 117 -NENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQGVAVVQI 160
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 184
Score = 59.2 bits (142), Expect = 8e-11
Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 10/165 (6%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAE-PELNLVGCCNELNAGYAADGYAR 86
+G + + L GA ++ +P +L+D + E + + +E AA ++
Sbjct: 5 NIGLAVMKILESWGADTIYGIPSGTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSK 64
Query: 87 SR-GVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF 145
+G V + G ++N + A +N+PV+ I+G +
Sbjct: 65 FGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQR--------ELNMDAFQE 116
Query: 146 TQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISI 190
+ + I V +L+D A A+ + + +
Sbjct: 117 LNQNPMYDHIAVYNRRVAYAEQLPKLVDEAARMAIAKRGVAVLEV 161
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 181
Score = 57.6 bits (138), Expect = 3e-10
Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 14/188 (7%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
+ +L G + VF +PG + D L + + ++ +E NA + A R
Sbjct: 6 HGADLVVSQLEAQGVRQVFGIPGAKIDKVFDSL-LDSSIRIIPVRHEANAAFMAAAVGRI 64
Query: 88 RG-VGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFT 146
G G +VT G +++ +A A SE PV+ + G D
Sbjct: 65 TGKAGVALVTSGPGCSNLITGMATANSEGDPVVALGGAVKRADKAKQVHQSM-------- 116
Query: 147 QELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK-PVYISISCNLPGIPHPTFARD 205
+ F +T V E++ A A + ++S+ ++ P
Sbjct: 117 DTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVVDGPVSG---K 173
Query: 206 PVPFFLAP 213
+P AP
Sbjct: 174 VLPASGAP 181
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase
complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 158
Score = 55.0 bits (132), Expect = 1e-09
Identities = 13/119 (10%), Positives = 37/119 (31%), Gaps = 10/119 (8%)
Query: 224 AVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIA------IMPSGKGLVP 277
+ A+ + KA +P+L+ GP++ ++ + GL
Sbjct: 8 KGKPVANMIKKAKRPLLIVGPDMT--DEMFERVKKFVEKDITVVATGSAITRFIDAGLGE 65
Query: 278 EHHPHFIGTY--WGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQ 334
+ + + + + + D + +G I+ S + ++ +
Sbjct: 66 KVNYAVLHELTQFLLDPDWKGFDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALA 124
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 177
Score = 55.0 bits (131), Expect = 2e-09
Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 7/156 (4%)
Query: 220 GLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEH 279
G + A + A L +A PVLV G + A A LA+ P+ KG++P
Sbjct: 4 GWQKAADQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKGVLPVG 63
Query: 280 HPHFIGT----YWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQP 335
H G G ++ + D + VG + + ++K + + P
Sbjct: 64 HELNYGAVTGYMDGILNFPALQTMFAPVDLVLTVGYDYAEDLRPSMWQKGIEKKTVRISP 123
Query: 336 HRVTVGNGPSLGWVFMAD---FLSALAKKLRKNTTA 368
+ + D F+
Sbjct: 124 TVNPIPRVYRPDVDVVTDVLAFVEHFETATASFGAK 159
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 179
Score = 53.4 bits (127), Expect = 6e-09
Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 1/144 (0%)
Query: 222 EAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHP 281
+ A++ A + +A P+ + G + KA L + + P+ G V + +
Sbjct: 7 DDAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAGAVNQDNF 66
Query: 282 HFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVG 341
G ++ +++ AD + +G +Y ++ I V P
Sbjct: 67 SRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNSGNATLVHIDVLPAYEERN 126
Query: 342 NGPSLGWV-FMADFLSALAKKLRK 364
P + V +A L+ LA+ +
Sbjct: 127 YTPDVELVGDIAGTLNKLAQNIDH 150
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 186
Score = 49.6 bits (117), Expect = 2e-07
Identities = 32/184 (17%), Positives = 56/184 (30%), Gaps = 13/184 (7%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
T L RL + G VF V G ++L ++ V +E AG AAD AR
Sbjct: 2 TAAHALLSRLRDHGVGKVFGVVGREAASILFD--EVEGIDFVLTRHEFTAGVAADVLARI 59
Query: 88 RG--VGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF 145
G + + + +
Sbjct: 60 TGRPQACWATLGPGMTNLSTGIATSVLDRSPVIALAAQSESHD--------IFPNDTHQC 111
Query: 146 TQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK-PVYISISCNLPGIPHPTFAR 204
+ ++ + + +L+D+A++ A+ E P +IS+ +L G
Sbjct: 112 LDSVAIVAPMSKYAVELQRPHEITDLVDSAVNAAMTEPVGPSFISLPVDLLGSSEGIDTT 171
Query: 205 DPVP 208
P P
Sbjct: 172 VPNP 175
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 160
Score = 46.8 bits (110), Expect = 8e-07
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 4/150 (2%)
Query: 222 EAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHP 281
+ ++ LN A P +V GP++ A A + LA+ P+ + PS
Sbjct: 6 DQDLDILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCPFPTRH 65
Query: 282 HFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAI-IVQPHRVTV 340
A ++ +++E D + +G Y +K + V +
Sbjct: 66 PCFRGLMPAGIAAIS-QLLEGHDVVLVIGAPVFRYHQYDPGQYLKPGTRLISVTCDPLEA 124
Query: 341 GNGPSLGWVF--MADFLSALAKKLRKNTTA 368
P + + SALA + +++
Sbjct: 125 ARAPMGDAIVADIGAMASALANLVEESSRQ 154
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 175
Score = 45.7 bits (107), Expect = 3e-06
Identities = 34/161 (21%), Positives = 52/161 (32%), Gaps = 13/161 (8%)
Query: 218 QLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVP 277
Q+ E A+ AD + A +PV++ G A+ L + TG P M KGL+P
Sbjct: 2 QIPAEDAIARAADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMAKGLLP 61
Query: 278 EHHPHFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHR 337
++HP + D V +G N G E VQ
Sbjct: 62 DNHPQSAAATR--------AFALAQCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDI 113
Query: 338 VTVGNGPSLGWVF-----MADFLSALAKKLRKNTTALENYR 373
+ + +S L K L+ A +
Sbjct: 114 QANEMDSNQPIAAPVVGDIKSAVSLLRKALKGAPKADAEWT 154
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 188
Score = 44.3 bits (103), Expect = 9e-06
Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 7/166 (4%)
Query: 30 GRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRG 89
L L ++ V G L + + + A+
Sbjct: 7 FHVLIDALKMNDIDTMYGVVGIPITNLARMWQDDGQRFYSFRHEQHAGYAASIAGYIEGK 66
Query: 90 VGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQEL 149
G C+ G L+ + ++A A + P+I + G + + + ++
Sbjct: 67 PGVCLTVSAPGFLNGVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEM------DQM 120
Query: 150 RCFQAITCSQAVVNNLGDAHELIDTAISTALKESK-PVYISISCNL 194
+ + +N++ D I A+ TA+ VY+ + L
Sbjct: 121 NVARPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYVDLPAKL 166
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 179
Score = 42.3 bits (98), Expect = 5e-05
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 6/148 (4%)
Query: 222 EAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHP 281
++ +E ++++ KPVL G + + TG P+A G G P
Sbjct: 6 DSHLEQIVRLISESKKPVLYVG--GGCLNSSDELGRFVELTGIPVASTLMGLGSYPCDDE 63
Query: 282 HFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVG 341
+ G + + VE +D + G F+D + + K + + +G
Sbjct: 64 LSL-HMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIG 122
Query: 342 NGPSLGWV---FMADFLSALAKKLRKNT 366
+ + L + K L
Sbjct: 123 KNKTPHVSVCGDVKLALQGMNKVLENRA 150
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 180
Score = 41.9 bits (97), Expect = 6e-05
Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 11/165 (6%)
Query: 28 TLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARS 87
++ L G VF PG L L + + E ADGYA++
Sbjct: 2 SVHGTTYELLRRQGIDTVFGNPGSNALPFLKDF--PEDFRYILALQEACVVGIADGYAQA 59
Query: 88 RGVGACVVTFTV-GGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFT 146
A + + G + + A++ A++ + P+I G G +L +
Sbjct: 60 SRKPAFINLHSAAGTGNAMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLTN-------V 112
Query: 147 QELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESK-PVYISI 190
+ + + + + AI A + PVY+S+
Sbjct: 113 DAANLPRPLVKWSYEPASAAEVPHAMSRAIHMASMAPQGPVYLSV 157
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 171
Score = 36.6 bits (83), Expect = 0.003
Identities = 23/148 (15%), Positives = 41/148 (27%), Gaps = 12/148 (8%)
Query: 229 ADFLNKAVKPV-LVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPE------HHP 281
AD +N A KPV VG + A + EL+D P+ G G +
Sbjct: 4 ADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDML 63
Query: 282 HFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQ----PHR 337
G ++ I+ + + + + I+ P
Sbjct: 64 GMHGCATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKN 123
Query: 338 VTVGNGPSLGWVFMA-DFLSALAKKLRK 364
+ + A L + K+
Sbjct: 124 INKVVQTQIAVEGDATTNLGKMMSKIFP 151
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 177
Score = 35.4 bits (80), Expect = 0.008
Identities = 24/145 (16%), Positives = 44/145 (30%), Gaps = 4/145 (2%)
Query: 222 EAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHP 281
++A + LN + +PV+ G I A ELA P+
Sbjct: 8 AQDIDAAVELLNNSKRPVIYAG--IGTMGHGPAVQELARKIKAPVITTGKNFETFEWDFE 65
Query: 282 HFIGTYWGAVSSSFCGEIVESADAYVFVGPIFNDYSSVGYSLLIKKEKAIIVQPHRVTVG 341
G+ + E + AD +F G F G + I + P +
Sbjct: 66 ALTGSTYRVGWKPAN-ETILEADTVLFAGSNFPFSEVEGTFRNVDNFIQIDIDPAMLGKR 124
Query: 342 NGPSLGWV-FMADFLSALAKKLRKN 365
+ + + A + + K+
Sbjct: 125 HHADVAILGDAALAIDEILNKVDAV 149
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 34.2 bits (76), Expect = 0.035
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLV 69
+ G G +G HL RL+ +V+ + D + + P + V
Sbjct: 5 ILGVN--GFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNHPHFHFV 50
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 30.6 bits (67), Expect = 0.52
Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 2/48 (4%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELN 67
V G G + H+ +L+E G K + L L
Sbjct: 16 VTGAN--GFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG 61
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 341
Score = 30.7 bits (68), Expect = 0.52
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAK----DVFSVPGDFNLTLLDHLIAEPELN 67
+ G A G +G +L L+++ K D F+ NL + L++E + +
Sbjct: 21 ITGVA--GFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase
{Escherichia coli [TaxId: 562]}
Length = 307
Score = 30.4 bits (66), Expect = 0.59
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSV 48
V GGA G +G ++ + L + G D+ V
Sbjct: 4 VTGGA--GFIGSNIVKALNDKGITDILVV 30
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 30.1 bits (67), Expect = 0.74
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSV---PGDFNLTLLDHLIAEPELNLV 69
+ GGA G +G + R +++ V ++ NL L + N
Sbjct: 5 ITGGA--GFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFE 55
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase) {Escherichia
coli [TaxId: 562]}
Length = 315
Score = 29.5 bits (65), Expect = 1.00
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 11/130 (8%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGY 79
+ G G +G + R+L + G ++ D L LLD A
Sbjct: 7 IAGHR--GMVGSAIRRQLEQRGDVELVLRTRD-ELNLLDSRAVHDFFASERIDQVYLAAA 63
Query: 80 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVI------CIVGGPNSNDYGTN 133
G + A + + N I A+ ++ + CI +
Sbjct: 64 KVGGIVANNTYPADFIYQNMMI--ESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAES 121
Query: 134 RILHHTIGLP 143
+L T+
Sbjct: 122 ELLQGTLEPT 131
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 29.2 bits (64), Expect = 1.2
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSV---PGDFNLTLLDHLIAEPELNLV 69
V G G G +LA+ L+E G + V + L L E ++
Sbjct: 5 VTGIT--GQDGAYLAKLLLEKGYR-VHGLVARRSSDTRWRLRELGIEGDIQYE 54
>d1d4oa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 177
Score = 28.6 bits (64), Expect = 1.5
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 222 EAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELAD 260
E ++ D + +A ++ G + AKAQ +L
Sbjct: 5 EINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVK 43
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 29.2 bits (64), Expect = 1.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSV---PGDFNLTLLDHLIAEPELNL 68
+ G G G +LA L+E G + V + FN ++HL P+ ++
Sbjct: 6 ITGIT--GQDGSYLAEFLLEKGYE-VHGIVRRSSSFNTGRIEHLYKNPQAHI 54
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 29.2 bits (63), Expect = 1.7
Identities = 17/145 (11%), Positives = 40/145 (27%), Gaps = 12/145 (8%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGY 79
V GG G G A L + + + ++D+L+ + +G +
Sbjct: 6 VIGGD--GYCGWATALHLSKKNYE----------VCIVDNLVRRLFDHQLGLESLTPIAS 53
Query: 80 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHT 139
D +R + + + VG + +A ++ P + G + +
Sbjct: 54 IHDRISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRA 113
Query: 140 IGLPDFTQELRCFQAITCSQAVVNN 164
+ +
Sbjct: 114 VYTQHNNVIGTLNVLFAIKEFGEEC 138
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 28.9 bits (63), Expect = 2.0
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSV---PGDFNLTLLDHLIAEPEL 66
+ G G G +L L+ G + V + +FN ++H+ +P
Sbjct: 6 ITGIT--GQDGSYLTEFLLGKGYE-VHGLIRRSSNFNTQRINHIYIDPHN 52
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 28.1 bits (61), Expect = 2.7
Identities = 8/23 (34%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 23 GASVGTLGRHLARRLVEIGAKDV 45
G + G +G +AR L GA +
Sbjct: 16 GGTGG-VGGQIARWLARRGAPHL 37
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia
coli [TaxId: 562]}
Length = 357
Score = 28.2 bits (62), Expect = 3.3
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSV---PGDFNLTLLDHLIAEPELN 67
+ G G G +LA L+E G + V + FN +DH+ +P
Sbjct: 6 ITGVT--GQDGSYLAEFLLEKGYE-VHGIKRRASSFNTERVDHIYQDPHTC 53
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 140
Score = 27.0 bits (59), Expect = 3.8
Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 206 PVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGG----PNIRVAKAQKAFIELADA 261
P+P L N++ L + F K G P +++ + + +++ +
Sbjct: 5 PIPDLLTTDARNRIQLTIG-AGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQ 63
Query: 262 TGYPIAIMPSGKGLVPEHHPH 282
+ G + E
Sbjct: 64 LTEETTLHWHGLEVPGEVDGG 84
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 27.4 bits (59), Expect = 3.8
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 9/42 (21%)
Query: 10 TGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGD 51
TG S G + R L L + G + V + GD
Sbjct: 12 TGYMNS-------GKD--AIARALQVTLNQQGGRSVSLLLGD 44
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 27.6 bits (60), Expect = 3.8
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAK----DVFSVPGDFNLTLLDHL 60
V GG+ G +G H +L++ G D L +++ L
Sbjct: 5 VTGGS--GYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL 47
>d1pnoa_ c.31.1.4 (A:) Transhydrogenase domain III (dIII)
{Rhodospirillum rubrum [TaxId: 1085]}
Length = 180
Score = 27.0 bits (60), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 222 EAAVEATADFLNKAVKPVLVGGPNIRVAKAQKAFIELAD 260
+ E A + A K ++V G + VA+AQ A E+AD
Sbjct: 10 AGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMAD 48
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 27.4 bits (60), Expect = 4.5
Identities = 9/48 (18%), Positives = 14/48 (29%), Gaps = 2/48 (4%)
Query: 243 GPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVP--EHHPHFIGTYW 288
GP I + + YP++I P G E +
Sbjct: 85 GPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNP 132
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 180
Score = 27.0 bits (59), Expect = 4.8
Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 2/74 (2%)
Query: 225 VEATADFLNKAVKPVLVG--GPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPH 282
E A F + + G GP + + + P++I G
Sbjct: 39 REYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGA 98
Query: 283 FIGTYWGAVSSSFC 296
+ +
Sbjct: 99 SYSDHTLPMEKMDD 112
>d2fug34 d.58.1.5 (3:96-246) NADH-quinone oxidoreductase chain 3,
Nqo3, domain 2 {Thermus thermophilus [TaxId: 274]}
Length = 151
Score = 26.6 bits (58), Expect = 5.5
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 274 GLVPEHHPHFIGTYWGAVSSSFCGEIVE 301
+ FIGT + S F G I +
Sbjct: 106 DFIERGVHTFIGTMDFGLPSGFSGNITD 133
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 27.3 bits (59), Expect = 6.1
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAK----DVFSVPGDFNLTLLDHL 60
V GGA G +G H L+E G D S ++ L+ L
Sbjct: 6 VTGGA--GYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL 48
>d1gg4a3 c.98.1.1 (A:1-98) UDP-murNac-tripeptide
D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli
[TaxId: 562]}
Length = 98
Score = 25.6 bits (56), Expect = 6.2
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 210 FLAPKVSNQLGLEAAVEATADFLNKAV--KPVLVGGPNIRVAKAQKAFIELA 259
F+A K + A +A A + +P+ + P + V + AF ELA
Sbjct: 40 FVALKGERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELA 91
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 192
Score = 26.6 bits (58), Expect = 7.5
Identities = 15/85 (17%), Positives = 23/85 (27%), Gaps = 2/85 (2%)
Query: 229 ADFLNKAVKPVLVG--GPNIRVAKAQKAFIELADATGYPIAIMPSGKGLVPEHHPHFIGT 286
F KPV +G GP I+ K ++ L + P G EH
Sbjct: 59 ETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPD 118
Query: 287 YWGAVSSSFCGEIVESADAYVFVGP 311
+ Y+ +
Sbjct: 119 NTTDFQRADDKVYPGEQYTYMLLAT 143
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 27.0 bits (58), Expect = 7.6
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAK----DVFSVPGDFNLTLLDHLIAEPELN 67
V GGA G +G H L+E G D F +L + L EL
Sbjct: 7 VTGGA--GYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT 56
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 26.7 bits (57), Expect = 8.4
Identities = 7/24 (29%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAK 43
+ G G +GRH+A+ +++G
Sbjct: 8 LIGAT--GYIGRHVAKASLDLGHP 29
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of
estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 302
Score = 26.5 bits (58), Expect = 8.6
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 23 GASVGTLGRHLARRLVEIGAKDVFS-VPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAA 81
GA G LGR A E GA V + + GDF A+ + +
Sbjct: 14 GAGGG-LGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYD 72
Query: 82 DGYARSRGVGACVVTFTVGGLSVLNAIAG 110
A + V + TF G + V+ AG
Sbjct: 73 SVEAGEKLVKTALDTF--GRIDVVVNNAG 99
>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica
napus) [TaxId: 3708]}
Length = 297
Score = 26.6 bits (57), Expect = 8.8
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFS 47
+ G A G +A+ L GA+ +
Sbjct: 13 IAGIADDNGYGWAVAKSLAAAGAEILVG 40
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 26.6 bits (57), Expect = 9.0
Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 8/54 (14%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAK----DVFSVPGDFNLTLLDHLIAEPELNLV 69
+ GG G LG +LA + G D S G L L + V
Sbjct: 5 ITGGC--GFLGSNLASFALSQGIDLIVFDNLSRKG--ATDNLHWLSSLGNFEFV 54
>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 476
Score = 26.7 bits (58), Expect = 9.2
Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 16/80 (20%)
Query: 223 AAVEATADFLNKAVK-PVLVGGPNIRVAKAQKAFIELADATGYPIA---------IMPSG 272
V+ AD+L V P+++ + A IMP
Sbjct: 12 EMVDYMADYLEGIEGRQVY---PDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMP-- 66
Query: 273 KGLVPEHHPHFIGTYWGAVS 292
G+ H P+F + A S
Sbjct: 67 -GVTHWHSPYFFAYFPTASS 85
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK
{Escherichia coli [TaxId: 562]}
Length = 187
Score = 26.0 bits (57), Expect = 9.6
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 80 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVG 123
D + G V V G+ L S+N+ I IV
Sbjct: 44 LVDRLYAASSSG-VPVNLLVRGMCSLIPNLEGISDNIRAISIVD 86
>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 329
Score = 26.4 bits (56), Expect = 9.9
Identities = 6/44 (13%), Positives = 14/44 (31%)
Query: 20 VRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAE 63
+ G G +A+ L + K +F + + +
Sbjct: 7 IAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNG 50
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.414
Gapped
Lambda K H
0.267 0.0407 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,233,998
Number of extensions: 107216
Number of successful extensions: 458
Number of sequences better than 10.0: 1
Number of HSP's gapped: 444
Number of HSP's successfully gapped: 75
Length of query: 589
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 499
Effective length of database: 1,171,896
Effective search space: 584776104
Effective search space used: 584776104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)