Query 007802
Match_columns 589
No_of_seqs 185 out of 1382
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 10:52:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 5E-206 2E-210 1657.0 46.5 539 49-589 2-541 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-205 8E-210 1660.0 44.4 544 44-589 33-578 (605)
3 1pj3_A NAD-dependent malic enz 100.0 4E-205 1E-209 1654.0 45.9 541 48-589 3-546 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 5E-121 2E-125 976.2 31.1 380 130-580 58-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 2E-112 8E-117 900.0 19.0 361 119-560 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 5E-107 2E-111 857.6 22.9 354 119-557 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 5.8E-86 2E-90 708.5 26.1 384 120-585 22-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.8 4.5E-08 1.5E-12 105.4 15.7 168 251-457 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 1.9E-08 6.6E-13 108.3 11.2 130 296-459 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.2 8.2E-07 2.8E-11 94.2 4.5 218 164-447 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 0.0004 1.4E-08 75.4 17.4 129 296-458 207-346 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 8.3E-05 2.8E-09 81.2 9.4 132 296-460 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.2 0.0043 1.5E-07 64.9 14.4 229 164-446 19-296 (384)
14 4dio_A NAD(P) transhydrogenase 96.9 0.001 3.5E-08 71.1 7.0 110 326-453 187-322 (405)
15 3k92_A NAD-GDH, NAD-specific g 96.6 0.019 6.3E-07 61.9 13.6 178 251-447 126-329 (424)
16 4fcc_A Glutamate dehydrogenase 96.4 0.18 6.1E-06 54.7 19.6 183 250-447 140-354 (450)
17 3p2y_A Alanine dehydrogenase/p 96.4 0.0039 1.3E-07 66.2 6.6 104 327-447 182-305 (381)
18 3aoe_E Glutamate dehydrogenase 96.2 0.03 1E-06 60.2 12.2 186 251-459 123-332 (419)
19 3d4o_A Dipicolinate synthase s 96.1 0.022 7.5E-07 57.2 10.0 122 307-457 133-255 (293)
20 1a4i_A Methylenetetrahydrofola 95.9 0.017 5.9E-07 59.6 8.3 96 307-446 143-239 (301)
21 3jyo_A Quinate/shikimate dehyd 95.7 0.026 8.7E-07 57.2 8.6 88 313-420 111-205 (283)
22 3l07_A Bifunctional protein fo 95.6 0.029 9.9E-07 57.5 8.6 93 308-444 140-233 (285)
23 3r3j_A Glutamate dehydrogenase 95.6 0.47 1.6E-05 51.5 18.4 190 251-459 145-368 (456)
24 2yfq_A Padgh, NAD-GDH, NAD-spe 95.6 0.11 3.9E-06 55.7 13.3 179 251-447 116-326 (421)
25 3p2o_A Bifunctional protein fo 95.3 0.043 1.5E-06 56.2 8.6 96 308-447 139-236 (285)
26 3aog_A Glutamate dehydrogenase 95.3 0.14 4.7E-06 55.4 12.9 188 251-459 140-353 (440)
27 1b0a_A Protein (fold bifunctio 95.2 0.035 1.2E-06 56.9 7.7 96 307-446 137-233 (288)
28 3ngx_A Bifunctional protein fo 95.2 0.043 1.5E-06 56.0 8.2 83 307-429 130-213 (276)
29 3tri_A Pyrroline-5-carboxylate 95.1 0.083 2.8E-06 52.8 10.0 121 329-478 3-127 (280)
30 4a5o_A Bifunctional protein fo 95.1 0.053 1.8E-06 55.6 8.5 96 308-447 140-237 (286)
31 4a26_A Putative C-1-tetrahydro 94.8 0.06 2.1E-06 55.5 8.0 96 305-444 141-239 (300)
32 2bma_A Glutamate dehydrogenase 94.7 0.3 1E-05 53.2 13.5 179 252-447 159-372 (470)
33 1edz_A 5,10-methylenetetrahydr 94.6 0.068 2.3E-06 55.5 8.0 113 311-447 150-278 (320)
34 1c1d_A L-phenylalanine dehydro 94.6 0.48 1.6E-05 49.8 14.5 173 253-459 92-275 (355)
35 3oj0_A Glutr, glutamyl-tRNA re 94.5 0.022 7.5E-07 50.7 3.5 88 307-420 4-91 (144)
36 1gpj_A Glutamyl-tRNA reductase 94.5 0.26 8.8E-06 51.9 12.2 102 326-447 164-269 (404)
37 4e12_A Diketoreductase; oxidor 94.5 0.077 2.6E-06 52.7 7.8 97 330-449 5-124 (283)
38 1v8b_A Adenosylhomocysteinase; 94.5 0.17 5.7E-06 55.3 10.9 123 304-459 235-357 (479)
39 1v9l_A Glutamate dehydrogenase 94.2 0.32 1.1E-05 52.3 12.2 178 252-447 116-325 (421)
40 2egg_A AROE, shikimate 5-dehyd 94.1 0.05 1.7E-06 55.1 5.4 87 314-420 125-215 (297)
41 2c2x_A Methylenetetrahydrofola 94.0 0.11 3.8E-06 53.1 7.8 98 307-446 136-234 (281)
42 2tmg_A Protein (glutamate dehy 93.8 1.3 4.4E-05 47.5 16.0 178 252-447 115-319 (415)
43 1bgv_A Glutamate dehydrogenase 93.8 1.3 4.3E-05 48.1 16.0 178 253-447 137-350 (449)
44 1leh_A Leucine dehydrogenase; 93.8 0.11 3.6E-06 54.7 7.5 159 257-447 93-264 (364)
45 3u62_A Shikimate dehydrogenase 93.7 0.11 3.6E-06 51.8 6.9 145 260-445 42-201 (253)
46 3u95_A Glycoside hydrolase, fa 93.6 0.13 4.4E-06 55.9 7.9 45 425-472 140-184 (477)
47 2rir_A Dipicolinate synthase, 93.4 0.18 6.3E-06 50.5 8.1 110 320-457 148-257 (300)
48 3d64_A Adenosylhomocysteinase; 93.3 0.17 5.9E-06 55.3 8.4 100 320-447 268-367 (494)
49 2dpo_A L-gulonate 3-dehydrogen 93.0 0.3 1E-05 50.1 9.1 123 329-477 6-151 (319)
50 3fbt_A Chorismate mutase and s 93.0 0.15 5.1E-06 51.8 6.7 49 314-373 107-155 (282)
51 3tnl_A Shikimate dehydrogenase 92.8 0.17 6E-06 52.0 7.1 50 313-373 138-187 (315)
52 3t4e_A Quinate/shikimate dehyd 92.8 0.17 5.8E-06 52.1 6.9 90 314-420 133-231 (312)
53 1pzg_A LDH, lactate dehydrogen 92.8 0.21 7E-06 51.4 7.5 106 330-449 10-137 (331)
54 1pjc_A Protein (L-alanine dehy 92.7 0.29 9.8E-06 50.7 8.7 96 327-446 165-269 (361)
55 3o8q_A Shikimate 5-dehydrogena 92.7 0.16 5.6E-06 51.3 6.6 50 313-373 110-159 (281)
56 1mld_A Malate dehydrogenase; o 92.7 0.36 1.2E-05 49.2 9.2 101 331-447 2-120 (314)
57 3don_A Shikimate dehydrogenase 92.6 0.11 3.8E-06 52.5 5.1 86 313-420 101-186 (277)
58 3pwz_A Shikimate dehydrogenase 92.5 0.17 5.9E-06 50.9 6.4 99 260-373 44-153 (272)
59 3dtt_A NADP oxidoreductase; st 92.5 0.31 1.1E-05 47.3 8.0 109 323-447 13-127 (245)
60 1hyh_A L-hicdh, L-2-hydroxyiso 92.3 0.14 4.8E-06 51.5 5.6 102 330-448 2-126 (309)
61 3tum_A Shikimate dehydrogenase 92.2 0.23 8E-06 50.0 7.0 49 314-373 110-158 (269)
62 3mw9_A GDH 1, glutamate dehydr 92.2 0.54 1.8E-05 51.6 10.2 179 251-447 136-352 (501)
63 2ewd_A Lactate dehydrogenase,; 92.1 0.21 7.2E-06 50.5 6.5 100 330-448 5-125 (317)
64 2o4c_A Erythronate-4-phosphate 91.9 1.2 4.2E-05 47.0 12.4 188 297-528 81-281 (380)
65 1gtm_A Glutamate dehydrogenase 91.6 1.7 5.8E-05 46.5 13.2 115 252-377 115-250 (419)
66 3fef_A Putative glucosidase LP 91.3 0.29 1E-05 52.9 7.0 106 327-447 3-149 (450)
67 3ado_A Lambda-crystallin; L-gu 91.2 1.8 6E-05 44.7 12.3 199 329-578 6-226 (319)
68 2ekl_A D-3-phosphoglycerate de 91.1 2.4 8.1E-05 43.2 13.2 121 296-445 90-233 (313)
69 3oet_A Erythronate-4-phosphate 90.8 1.5 5.1E-05 46.4 11.6 120 296-447 83-213 (381)
70 1nyt_A Shikimate 5-dehydrogena 90.7 0.4 1.4E-05 47.4 6.8 49 313-373 103-151 (271)
71 3ce6_A Adenosylhomocysteinase; 90.7 1.8 6E-05 47.4 12.4 108 321-459 266-374 (494)
72 1zud_1 Adenylyltransferase THI 90.6 0.23 8E-06 49.0 5.0 37 326-373 25-61 (251)
73 2eez_A Alanine dehydrogenase; 90.5 0.84 2.9E-05 47.2 9.3 97 326-446 163-268 (369)
74 3h5n_A MCCB protein; ubiquitin 90.3 0.68 2.3E-05 48.1 8.4 38 325-373 114-151 (353)
75 1p77_A Shikimate 5-dehydrogena 90.3 0.32 1.1E-05 48.2 5.7 49 313-373 103-151 (272)
76 2v6b_A L-LDH, L-lactate dehydr 90.1 0.09 3.1E-06 53.2 1.6 103 331-448 2-120 (304)
77 1lu9_A Methylene tetrahydromet 90.1 1.3 4.4E-05 43.9 9.9 83 277-373 62-152 (287)
78 2hjr_A Malate dehydrogenase; m 89.9 0.22 7.6E-06 51.1 4.2 104 330-448 15-135 (328)
79 3rui_A Ubiquitin-like modifier 89.8 0.26 8.8E-06 51.6 4.7 37 326-373 31-67 (340)
80 2dbq_A Glyoxylate reductase; D 89.7 4.4 0.00015 41.4 13.8 93 324-445 145-241 (334)
81 2gcg_A Glyoxylate reductase/hy 89.6 2.9 9.9E-05 42.7 12.3 122 296-445 98-247 (330)
82 1t2d_A LDH-P, L-lactate dehydr 89.6 0.3 1E-05 50.0 5.0 101 330-449 5-131 (322)
83 2g1u_A Hypothetical protein TM 89.6 0.59 2E-05 41.8 6.3 37 325-373 15-51 (155)
84 1b8p_A Protein (malate dehydro 89.6 0.21 7.1E-06 51.1 3.7 111 330-447 6-136 (329)
85 1txg_A Glycerol-3-phosphate de 89.5 0.94 3.2E-05 45.0 8.4 94 331-447 2-107 (335)
86 2i6t_A Ubiquitin-conjugating e 89.3 0.58 2E-05 47.7 6.8 101 330-448 15-129 (303)
87 1obb_A Maltase, alpha-glucosid 89.2 0.46 1.6E-05 51.8 6.3 124 329-470 3-174 (480)
88 2hk9_A Shikimate dehydrogenase 88.8 0.76 2.6E-05 45.5 7.1 84 314-420 114-197 (275)
89 2zyd_A 6-phosphogluconate dehy 88.7 0.95 3.2E-05 48.9 8.3 102 326-447 12-116 (480)
90 1o6z_A MDH, malate dehydrogena 88.6 0.27 9.2E-06 49.8 3.8 102 331-447 2-122 (303)
91 1a5z_A L-lactate dehydrogenase 88.6 0.5 1.7E-05 48.0 5.8 99 331-449 2-121 (319)
92 1x7d_A Ornithine cyclodeaminas 88.6 0.77 2.6E-05 47.7 7.3 114 314-455 116-238 (350)
93 1ldn_A L-lactate dehydrogenase 88.5 0.18 6E-06 51.5 2.3 105 330-447 7-126 (316)
94 3hdj_A Probable ornithine cycl 88.2 2.2 7.5E-05 43.6 10.2 110 317-457 111-227 (313)
95 4e21_A 6-phosphogluconate dehy 88.1 1.8 6.2E-05 45.0 9.7 95 327-446 20-117 (358)
96 2i99_A MU-crystallin homolog; 88.1 1.4 4.8E-05 44.5 8.7 113 314-454 122-237 (312)
97 2hmt_A YUAA protein; RCK, KTN, 88.0 0.33 1.1E-05 41.6 3.4 102 327-447 4-108 (144)
98 2zqz_A L-LDH, L-lactate dehydr 87.9 0.36 1.2E-05 49.6 4.2 106 329-447 9-128 (326)
99 1wwk_A Phosphoglycerate dehydr 87.8 4.4 0.00015 41.1 12.1 108 308-445 103-233 (307)
100 3h8v_A Ubiquitin-like modifier 87.7 0.53 1.8E-05 48.1 5.2 38 325-373 32-69 (292)
101 2rcy_A Pyrroline carboxylate r 87.7 2.8 9.6E-05 40.2 10.2 92 329-448 4-95 (262)
102 1smk_A Malate dehydrogenase, g 87.6 0.76 2.6E-05 47.0 6.4 104 330-447 9-128 (326)
103 4g2n_A D-isomer specific 2-hyd 87.6 4.5 0.00015 42.1 12.2 191 297-526 117-336 (345)
104 1s6y_A 6-phospho-beta-glucosid 87.4 0.31 1.1E-05 52.5 3.5 127 330-470 8-175 (450)
105 4gsl_A Ubiquitin-like modifier 87.4 0.47 1.6E-05 53.3 5.0 37 326-373 323-359 (615)
106 2vhw_A Alanine dehydrogenase; 87.4 0.7 2.4E-05 48.2 6.1 95 326-444 165-268 (377)
107 3d1l_A Putative NADP oxidoredu 87.4 0.38 1.3E-05 46.7 3.8 99 325-447 6-105 (266)
108 1ez4_A Lactate dehydrogenase; 87.4 0.44 1.5E-05 48.8 4.4 105 330-447 6-124 (318)
109 1y6j_A L-lactate dehydrogenase 87.2 0.58 2E-05 47.8 5.2 104 330-447 8-126 (318)
110 3ba1_A HPPR, hydroxyphenylpyru 87.2 3.5 0.00012 42.5 11.1 108 308-447 124-254 (333)
111 1z82_A Glycerol-3-phosphate de 87.1 0.52 1.8E-05 47.7 4.8 98 329-449 14-116 (335)
112 3d0o_A L-LDH 1, L-lactate dehy 87.0 0.55 1.9E-05 47.9 4.9 107 328-447 5-126 (317)
113 1up7_A 6-phospho-beta-glucosid 86.9 0.92 3.1E-05 48.4 6.8 124 330-470 3-164 (417)
114 3vku_A L-LDH, L-lactate dehydr 86.9 0.55 1.9E-05 48.6 4.9 107 328-447 8-128 (326)
115 2j6i_A Formate dehydrogenase; 86.9 3.2 0.00011 43.2 10.8 162 277-466 88-277 (364)
116 3gt0_A Pyrroline-5-carboxylate 86.8 1.5 5E-05 42.3 7.6 98 330-448 3-101 (247)
117 1nvt_A Shikimate 5'-dehydrogen 86.4 0.62 2.1E-05 46.4 4.8 49 312-373 111-159 (287)
118 2d5c_A AROE, shikimate 5-dehyd 86.4 1.1 3.6E-05 43.9 6.4 81 314-420 102-182 (263)
119 4dgs_A Dehydrogenase; structur 86.2 4.5 0.00016 41.9 11.4 176 308-526 130-331 (340)
120 1omo_A Alanine dehydrogenase; 86.1 2.5 8.7E-05 43.0 9.3 112 314-455 112-229 (322)
121 3vh1_A Ubiquitin-like modifier 86.1 0.56 1.9E-05 52.5 4.7 38 325-373 323-360 (598)
122 1xdw_A NAD+-dependent (R)-2-hy 85.8 6.7 0.00023 40.2 12.3 137 277-445 73-235 (331)
123 2cuk_A Glycerate dehydrogenase 85.7 6.7 0.00023 39.9 12.2 117 296-446 87-231 (311)
124 3kkj_A Amine oxidase, flavin-c 85.7 0.71 2.4E-05 40.9 4.3 31 331-373 4-34 (336)
125 2p4q_A 6-phosphogluconate dehy 85.6 2.1 7.2E-05 46.5 8.9 98 330-447 11-112 (497)
126 1npy_A Hypothetical shikimate 85.5 1.1 3.7E-05 45.0 6.1 48 314-373 105-152 (271)
127 1lld_A L-lactate dehydrogenase 85.5 0.5 1.7E-05 47.2 3.6 103 329-448 7-128 (319)
128 1u8x_X Maltose-6'-phosphate gl 85.4 0.5 1.7E-05 51.3 3.9 126 329-470 28-194 (472)
129 4huj_A Uncharacterized protein 85.3 0.94 3.2E-05 43.2 5.3 93 330-448 24-117 (220)
130 2d0i_A Dehydrogenase; structur 85.3 5.3 0.00018 41.0 11.3 91 325-445 142-236 (333)
131 1jw9_B Molybdopterin biosynthe 85.1 0.54 1.9E-05 46.2 3.6 38 326-374 28-65 (249)
132 4hy3_A Phosphoglycerate oxidor 85.1 3.6 0.00012 43.2 10.0 177 308-526 134-339 (365)
133 1guz_A Malate dehydrogenase; o 85.0 0.83 2.8E-05 46.2 5.0 100 331-447 2-121 (310)
134 1ur5_A Malate dehydrogenase; o 85.0 1.1 3.8E-05 45.4 5.9 103 330-447 3-122 (309)
135 1oju_A MDH, malate dehydrogena 84.9 0.63 2.2E-05 47.3 4.1 103 331-447 2-121 (294)
136 3gvi_A Malate dehydrogenase; N 84.9 1.1 3.7E-05 46.2 5.9 106 327-447 5-127 (324)
137 3evt_A Phosphoglycerate dehydr 84.5 3.3 0.00011 42.6 9.4 189 296-526 83-301 (324)
138 1qp8_A Formate dehydrogenase; 84.3 11 0.00037 38.2 12.9 117 296-445 71-211 (303)
139 3i83_A 2-dehydropantoate 2-red 84.3 1.1 3.7E-05 45.1 5.5 98 330-448 3-109 (320)
140 3k5p_A D-3-phosphoglycerate de 84.3 14 0.00048 39.5 14.3 193 295-526 101-322 (416)
141 2ph5_A Homospermidine synthase 84.3 4.6 0.00016 44.1 10.6 99 328-445 12-115 (480)
142 3jtm_A Formate dehydrogenase, 83.9 7 0.00024 40.6 11.5 173 296-499 108-308 (351)
143 2yq5_A D-isomer specific 2-hyd 83.6 12 0.00041 38.8 13.1 120 297-447 93-239 (343)
144 3k96_A Glycerol-3-phosphate de 83.6 2.9 9.9E-05 43.3 8.5 100 329-448 29-137 (356)
145 1ks9_A KPA reductase;, 2-dehyd 83.5 1.8 6E-05 41.8 6.4 95 331-447 2-100 (291)
146 2raf_A Putative dinucleotide-b 83.4 2.3 8E-05 40.2 7.1 80 325-448 15-94 (209)
147 2xxj_A L-LDH, L-lactate dehydr 83.3 0.46 1.6E-05 48.4 2.2 103 331-447 2-119 (310)
148 1dxy_A D-2-hydroxyisocaproate 83.3 12 0.00041 38.4 12.8 121 296-447 90-236 (333)
149 3tl2_A Malate dehydrogenase; c 83.1 0.82 2.8E-05 46.9 4.1 107 327-447 6-130 (315)
150 2pi1_A D-lactate dehydrogenase 82.9 7.7 0.00026 40.0 11.3 128 308-467 101-251 (334)
151 2d4a_B Malate dehydrogenase; a 82.9 0.99 3.4E-05 45.9 4.6 98 331-447 1-119 (308)
152 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.9 2.1 7E-05 46.2 7.2 97 331-447 3-106 (478)
153 1j4a_A D-LDH, D-lactate dehydr 82.6 12 0.00043 38.2 12.7 140 295-466 91-255 (333)
154 2vns_A Metalloreductase steap3 82.5 1 3.5E-05 42.9 4.2 94 327-448 26-119 (215)
155 3nep_X Malate dehydrogenase; h 82.5 0.71 2.4E-05 47.4 3.3 104 331-447 2-121 (314)
156 3p7m_A Malate dehydrogenase; p 82.4 0.79 2.7E-05 47.1 3.6 106 328-447 4-125 (321)
157 1f0y_A HCDH, L-3-hydroxyacyl-C 82.4 1.5 5E-05 43.6 5.5 32 330-373 16-47 (302)
158 3b1f_A Putative prephenate deh 82.3 1.8 6.1E-05 42.4 6.0 95 330-446 7-103 (290)
159 4ina_A Saccharopine dehydrogen 82.2 1.8 6.3E-05 45.4 6.4 96 330-445 2-108 (405)
160 1hdo_A Biliverdin IX beta redu 81.9 3.7 0.00013 36.9 7.6 97 329-443 3-110 (206)
161 1hye_A L-lactate/malate dehydr 81.7 2.1 7.2E-05 43.3 6.4 103 331-447 2-125 (313)
162 1hyu_A AHPF, alkyl hydroperoxi 81.5 1.4 4.9E-05 47.3 5.4 100 259-373 134-244 (521)
163 3vrd_B FCCB subunit, flavocyto 81.5 1.6 5.6E-05 44.3 5.6 35 329-373 2-36 (401)
164 3hg7_A D-isomer specific 2-hyd 81.4 3.8 0.00013 42.2 8.3 177 308-528 103-304 (324)
165 2iz1_A 6-phosphogluconate dehy 81.1 3.8 0.00013 43.9 8.5 99 329-447 5-106 (474)
166 2w2k_A D-mandelate dehydrogena 80.9 12 0.00042 38.5 12.0 97 324-446 158-258 (348)
167 3gvx_A Glycerate dehydrogenase 80.9 11 0.00038 38.1 11.4 176 308-527 85-282 (290)
168 3lk7_A UDP-N-acetylmuramoylala 80.7 1.8 6.1E-05 46.0 5.7 120 326-483 6-125 (451)
169 2pgd_A 6-phosphogluconate dehy 80.5 3.3 0.00011 44.5 7.7 98 330-447 3-104 (482)
170 1bg6_A N-(1-D-carboxylethyl)-L 80.5 4.1 0.00014 40.7 8.0 93 330-445 5-110 (359)
171 1x0v_A GPD-C, GPDH-C, glycerol 80.4 3.4 0.00012 41.5 7.5 111 329-448 8-128 (354)
172 1y8q_A Ubiquitin-like 1 activa 80.3 1.4 4.8E-05 45.6 4.6 37 326-373 33-69 (346)
173 3c24_A Putative oxidoreductase 80.3 2.2 7.6E-05 41.9 5.9 91 330-447 12-104 (286)
174 3phh_A Shikimate dehydrogenase 80.2 1.5 5.1E-05 44.2 4.7 100 314-446 107-212 (269)
175 1jay_A Coenzyme F420H2:NADP+ o 80.2 0.97 3.3E-05 42.0 3.1 95 331-448 2-101 (212)
176 1sc6_A PGDH, D-3-phosphoglycer 80.1 18 0.00063 38.2 13.2 191 296-526 91-311 (404)
177 2nac_A NAD-dependent formate d 80.1 8 0.00027 40.9 10.4 164 324-526 186-357 (393)
178 3gg9_A D-3-phosphoglycerate de 80.0 8.3 0.00029 40.1 10.4 162 324-526 155-325 (352)
179 1y7t_A Malate dehydrogenase; N 79.9 1.3 4.3E-05 44.9 4.1 110 330-447 5-133 (327)
180 3pqe_A L-LDH, L-lactate dehydr 79.8 0.87 3E-05 47.0 2.9 106 329-447 5-125 (326)
181 4dll_A 2-hydroxy-3-oxopropiona 79.7 3 0.0001 42.0 6.8 35 327-373 29-63 (320)
182 3l6d_A Putative oxidoreductase 79.3 2.5 8.6E-05 42.3 6.0 36 326-373 6-41 (306)
183 4egb_A DTDP-glucose 4,6-dehydr 79.1 5.2 0.00018 39.5 8.2 106 327-444 22-149 (346)
184 3pp8_A Glyoxylate/hydroxypyruv 79.1 5.4 0.00018 40.8 8.5 191 296-526 86-301 (315)
185 2qrj_A Saccharopine dehydrogen 79.0 4.7 0.00016 42.9 8.3 71 329-431 214-289 (394)
186 2h78_A Hibadh, 3-hydroxyisobut 79.0 3 0.0001 41.2 6.4 32 330-373 4-35 (302)
187 4gwg_A 6-phosphogluconate dehy 78.7 4.4 0.00015 44.1 8.1 98 330-447 5-106 (484)
188 2g76_A 3-PGDH, D-3-phosphoglyc 78.7 13 0.00045 38.3 11.3 120 297-446 112-257 (335)
189 3k6j_A Protein F01G10.3, confi 78.7 2 6.9E-05 46.5 5.4 105 403-519 151-267 (460)
190 1gdh_A D-glycerate dehydrogena 78.6 12 0.00043 38.0 11.0 122 296-445 89-239 (320)
191 1mx3_A CTBP1, C-terminal bindi 78.5 28 0.00096 36.0 13.8 190 296-525 107-333 (347)
192 2izz_A Pyrroline-5-carboxylate 78.3 6.5 0.00022 39.6 8.7 99 329-448 22-122 (322)
193 3pef_A 6-phosphogluconate dehy 78.0 2.6 9E-05 41.4 5.6 32 330-373 2-33 (287)
194 4fgw_A Glycerol-3-phosphate de 77.9 2.5 8.6E-05 44.9 5.7 97 330-435 35-141 (391)
195 3doj_A AT3G25530, dehydrogenas 77.6 4.5 0.00015 40.5 7.3 36 326-373 18-53 (310)
196 3pdi_B Nitrogenase MOFE cofact 77.5 0.96 3.3E-05 48.6 2.5 75 325-418 309-384 (458)
197 2uyy_A N-PAC protein; long-cha 77.4 3.3 0.00011 41.1 6.2 32 330-373 31-62 (316)
198 3qsg_A NAD-binding phosphogluc 77.0 11 0.00038 37.7 10.0 33 330-373 25-57 (312)
199 3c85_A Putative glutathione-re 76.8 3.7 0.00012 37.3 5.9 37 326-373 36-72 (183)
200 1yj8_A Glycerol-3-phosphate de 76.7 3 0.0001 42.7 5.8 110 330-448 22-145 (375)
201 4e5n_A Thermostable phosphite 76.6 7.1 0.00024 40.1 8.6 194 297-526 90-317 (330)
202 3pdu_A 3-hydroxyisobutyrate de 76.5 3.5 0.00012 40.5 6.0 32 330-373 2-33 (287)
203 3ip1_A Alcohol dehydrogenase, 76.4 16 0.00056 37.6 11.4 94 315-431 199-304 (404)
204 3abi_A Putative uncharacterize 75.9 1.9 6.4E-05 44.3 4.0 88 331-445 18-109 (365)
205 1y8q_B Anthracycline-, ubiquit 75.4 3.1 0.00011 47.0 5.9 37 326-373 14-50 (640)
206 3e8x_A Putative NAD-dependent 75.2 4.4 0.00015 37.9 6.1 101 325-444 17-131 (236)
207 3cky_A 2-hydroxymethyl glutara 75.1 2.8 9.6E-05 41.1 4.9 32 330-373 5-36 (301)
208 3o38_A Short chain dehydrogena 75.0 4.2 0.00014 39.0 6.0 76 326-420 19-112 (266)
209 3i6i_A Putative leucoanthocyan 74.8 1.7 5.9E-05 43.3 3.3 101 326-441 7-117 (346)
210 1tt5_B Ubiquitin-activating en 74.7 1.8 6.2E-05 46.4 3.7 38 325-373 36-73 (434)
211 1yb4_A Tartronic semialdehyde 74.7 4.5 0.00015 39.4 6.2 30 330-371 4-33 (295)
212 2z2v_A Hypothetical protein PH 74.5 2.4 8.2E-05 44.1 4.4 120 328-476 15-137 (365)
213 3gpi_A NAD-dependent epimerase 73.7 2 6.7E-05 41.5 3.3 96 328-444 2-109 (286)
214 4b4u_A Bifunctional protein fo 73.7 8.3 0.00028 39.8 8.1 84 308-429 158-242 (303)
215 4aj2_A L-lactate dehydrogenase 73.5 1.4 4.9E-05 45.6 2.4 108 326-447 16-139 (331)
216 2x0j_A Malate dehydrogenase; o 73.1 3.7 0.00013 41.8 5.3 104 331-447 2-121 (294)
217 3fi9_A Malate dehydrogenase; s 72.8 2.4 8.2E-05 44.1 3.9 107 327-447 6-129 (343)
218 2pzm_A Putative nucleotide sug 72.8 7.6 0.00026 38.3 7.4 104 324-444 15-136 (330)
219 3s2u_A UDP-N-acetylglucosamine 72.3 5.7 0.0002 40.4 6.6 40 402-445 85-124 (365)
220 3r6d_A NAD-dependent epimerase 72.2 3.4 0.00012 38.3 4.4 94 330-442 6-106 (221)
221 3fwz_A Inner membrane protein 71.8 2 6.9E-05 37.7 2.7 32 330-373 8-39 (140)
222 3qha_A Putative oxidoreductase 71.5 4.7 0.00016 40.0 5.6 32 330-373 16-47 (296)
223 2g5c_A Prephenate dehydrogenas 71.5 6.8 0.00023 38.1 6.6 97 330-447 2-99 (281)
224 1vpd_A Tartronate semialdehyde 71.4 3.3 0.00011 40.5 4.4 32 330-373 6-37 (299)
225 1i36_A Conserved hypothetical 71.2 7.3 0.00025 37.4 6.7 30 331-372 2-31 (264)
226 4hb9_A Similarities with proba 70.9 3.6 0.00012 41.0 4.6 32 330-373 2-33 (412)
227 3d1c_A Flavin-containing putat 70.5 3.6 0.00012 40.7 4.4 35 329-374 4-38 (369)
228 3ldh_A Lactate dehydrogenase; 70.1 1.7 5.9E-05 45.1 2.1 117 328-461 20-152 (330)
229 2q1w_A Putative nucleotide sug 69.5 14 0.00047 36.5 8.4 104 326-444 18-137 (333)
230 2yjz_A Metalloreductase steap4 72.5 0.95 3.3E-05 43.0 0.0 92 327-447 17-108 (201)
231 4id9_A Short-chain dehydrogena 69.4 9.4 0.00032 37.6 7.2 97 324-444 14-126 (347)
232 4ezb_A Uncharacterized conserv 68.7 4.9 0.00017 40.6 5.0 33 330-373 25-57 (317)
233 3ggo_A Prephenate dehydrogenas 68.6 13 0.00043 37.6 8.1 35 329-373 33-67 (314)
234 2z1m_A GDP-D-mannose dehydrata 68.6 8.6 0.00029 37.5 6.7 103 328-444 2-127 (345)
235 2nvu_B Maltose binding protein 68.5 3.5 0.00012 46.9 4.3 35 328-373 410-444 (805)
236 3hyw_A Sulfide-quinone reducta 68.5 3.7 0.00013 42.7 4.3 34 330-373 3-36 (430)
237 3fbs_A Oxidoreductase; structu 68.0 4.6 0.00016 38.3 4.4 32 330-373 3-34 (297)
238 5mdh_A Malate dehydrogenase; o 67.6 2.3 7.7E-05 44.0 2.3 110 330-447 4-132 (333)
239 3fg2_P Putative rubredoxin red 67.5 4.7 0.00016 41.3 4.7 37 330-376 2-38 (404)
240 3dhn_A NAD-dependent epimerase 67.5 6.7 0.00023 36.1 5.4 95 330-443 5-111 (227)
241 2pv7_A T-protein [includes: ch 67.4 14 0.00048 36.7 8.0 32 330-373 22-54 (298)
242 4a9w_A Monooxygenase; baeyer-v 67.3 4 0.00014 39.7 3.9 34 329-374 3-36 (357)
243 2cvz_A Dehydrogenase, 3-hydrox 66.6 4.3 0.00015 39.3 4.0 30 331-373 3-32 (289)
244 3ic5_A Putative saccharopine d 66.4 6.3 0.00022 32.3 4.5 85 328-434 4-92 (118)
245 1lss_A TRK system potassium up 66.4 6.4 0.00022 33.2 4.6 33 329-373 4-36 (140)
246 3f8d_A Thioredoxin reductase ( 66.3 5.2 0.00018 38.4 4.5 33 329-373 15-47 (323)
247 3vtz_A Glucose 1-dehydrogenase 66.0 20 0.00067 34.8 8.6 79 324-420 9-92 (269)
248 3alj_A 2-methyl-3-hydroxypyrid 65.6 5.6 0.00019 40.1 4.8 38 326-375 8-45 (379)
249 3llv_A Exopolyphosphatase-rela 65.4 6 0.00021 34.2 4.3 34 328-373 5-38 (141)
250 3slg_A PBGP3 protein; structur 65.3 25 0.00084 35.0 9.4 101 326-444 21-141 (372)
251 2zbw_A Thioredoxin reductase; 65.3 5.4 0.00019 38.9 4.5 34 329-374 5-38 (335)
252 3lzw_A Ferredoxin--NADP reduct 65.1 5.6 0.00019 38.4 4.5 33 329-373 7-39 (332)
253 3klj_A NAD(FAD)-dependent dehy 65.0 5.7 0.0002 41.0 4.8 37 328-376 8-44 (385)
254 2x5o_A UDP-N-acetylmuramoylala 64.9 18 0.0006 38.1 8.6 111 326-471 2-112 (439)
255 2ahr_A Putative pyrroline carb 64.4 6 0.00021 37.9 4.5 90 330-447 4-93 (259)
256 2jae_A L-amino acid oxidase; o 64.4 6.1 0.00021 41.2 4.9 42 322-375 4-45 (489)
257 3m2p_A UDP-N-acetylglucosamine 64.2 16 0.00055 35.5 7.6 93 330-444 3-109 (311)
258 3lxd_A FAD-dependent pyridine 64.2 5.8 0.0002 40.8 4.6 38 328-375 8-45 (415)
259 3nrc_A Enoyl-[acyl-carrier-pro 64.0 12 0.0004 36.4 6.5 79 326-421 23-115 (280)
260 3kb6_A D-lactate dehydrogenase 63.9 60 0.0021 33.2 12.2 111 324-468 136-252 (334)
261 3oz2_A Digeranylgeranylglycero 63.8 5.7 0.00019 39.1 4.3 31 331-373 6-36 (397)
262 2gf2_A Hibadh, 3-hydroxyisobut 63.6 9.8 0.00034 37.0 6.0 31 331-373 2-32 (296)
263 4b8w_A GDP-L-fucose synthase; 63.4 10 0.00035 36.1 5.9 93 326-444 3-113 (319)
264 3h8l_A NADH oxidase; membrane 63.4 8 0.00027 39.5 5.5 36 330-374 2-37 (409)
265 1ygy_A PGDH, D-3-phosphoglycer 63.4 33 0.0011 37.3 10.6 121 296-445 88-233 (529)
266 2ywl_A Thioredoxin reductase r 63.4 6.9 0.00024 34.9 4.5 32 330-373 2-33 (180)
267 1np3_A Ketol-acid reductoisome 63.1 10 0.00034 38.7 6.1 87 328-441 15-104 (338)
268 1n2s_A DTDP-4-, DTDP-glucose o 63.1 7.6 0.00026 37.3 5.0 86 331-444 2-104 (299)
269 3itj_A Thioredoxin reductase 1 62.5 5.1 0.00017 38.8 3.6 33 329-373 22-54 (338)
270 3hhp_A Malate dehydrogenase; M 62.4 8.6 0.00029 39.3 5.4 103 331-447 2-121 (312)
271 1tt5_A APPBP1, amyloid protein 62.1 4.1 0.00014 44.8 3.1 38 325-373 28-65 (531)
272 3ef6_A Toluene 1,2-dioxygenase 61.8 7.5 0.00026 40.0 5.0 37 330-376 3-39 (410)
273 3dme_A Conserved exported prot 61.7 7.2 0.00025 38.1 4.6 33 329-373 4-36 (369)
274 4ej6_A Putative zinc-binding d 61.7 22 0.00074 36.3 8.4 104 304-432 159-275 (370)
275 3enk_A UDP-glucose 4-epimerase 61.4 20 0.00068 35.0 7.8 97 329-444 5-129 (341)
276 2q7v_A Thioredoxin reductase; 61.3 7.1 0.00024 38.1 4.5 33 329-373 8-40 (325)
277 3ek2_A Enoyl-(acyl-carrier-pro 61.3 9.8 0.00033 36.1 5.4 81 324-420 9-103 (271)
278 1uzm_A 3-oxoacyl-[acyl-carrier 61.3 19 0.00063 34.3 7.3 79 323-420 9-92 (247)
279 2dq4_A L-threonine 3-dehydroge 60.8 9.2 0.00031 38.4 5.3 86 312-418 149-240 (343)
280 2nu8_A Succinyl-COA ligase [AD 60.8 21 0.00072 35.7 7.9 86 329-440 7-93 (288)
281 4a7p_A UDP-glucose dehydrogena 60.7 27 0.00091 37.4 9.1 45 410-454 122-166 (446)
282 1id1_A Putative potassium chan 60.6 9 0.00031 33.8 4.6 34 328-373 2-35 (153)
283 3ehe_A UDP-glucose 4-epimerase 60.6 24 0.00083 34.1 8.2 95 331-444 3-114 (313)
284 3c96_A Flavin-containing monoo 60.6 8.2 0.00028 39.4 4.9 35 329-374 4-38 (410)
285 1ryi_A Glycine oxidase; flavop 60.6 7.5 0.00026 38.7 4.6 35 329-375 17-51 (382)
286 1e6u_A GDP-fucose synthetase; 60.5 13 0.00044 36.1 6.2 87 329-444 3-107 (321)
287 3cty_A Thioredoxin reductase; 60.4 7.2 0.00025 37.9 4.3 33 329-373 16-48 (319)
288 1pqw_A Polyketide synthase; ro 60.3 22 0.00075 32.3 7.4 50 312-373 22-72 (198)
289 3r9u_A Thioredoxin reductase; 60.2 7.3 0.00025 37.3 4.3 33 329-373 4-37 (315)
290 4eqs_A Coenzyme A disulfide re 60.1 7.3 0.00025 40.8 4.6 35 331-375 2-36 (437)
291 2vdc_G Glutamate synthase [NAD 60.0 8.4 0.00029 40.9 5.1 34 328-373 121-154 (456)
292 3i1j_A Oxidoreductase, short c 59.9 24 0.00083 33.0 7.8 38 325-373 10-47 (247)
293 1y56_B Sarcosine oxidase; dehy 59.9 7.5 0.00026 38.8 4.4 34 329-374 5-38 (382)
294 2q0l_A TRXR, thioredoxin reduc 59.8 7.9 0.00027 37.3 4.4 33 330-373 2-34 (311)
295 2c20_A UDP-glucose 4-epimerase 59.6 17 0.00058 35.3 6.9 99 330-444 2-118 (330)
296 3ab1_A Ferredoxin--NADP reduct 59.4 8.2 0.00028 38.3 4.6 34 329-374 14-47 (360)
297 2d8a_A PH0655, probable L-thre 59.4 8.8 0.0003 38.6 4.9 49 312-373 153-201 (348)
298 2gf3_A MSOX, monomeric sarcosi 59.3 7.9 0.00027 38.5 4.5 35 330-376 4-38 (389)
299 3ew7_A LMO0794 protein; Q8Y8U8 59.0 31 0.0011 31.2 8.1 91 331-444 2-103 (221)
300 2gqw_A Ferredoxin reductase; f 58.8 10 0.00036 39.0 5.4 38 329-376 7-44 (408)
301 3k7m_X 6-hydroxy-L-nicotine ox 58.8 8.5 0.00029 39.1 4.7 32 331-374 3-34 (431)
302 3nix_A Flavoprotein/dehydrogen 58.7 11 0.00038 38.1 5.5 35 329-375 5-39 (421)
303 3dfz_A SIRC, precorrin-2 dehyd 58.7 7.5 0.00026 38.0 4.1 36 326-373 28-63 (223)
304 2bka_A CC3, TAT-interacting pr 58.6 15 0.0005 34.2 6.0 102 327-444 16-132 (242)
305 3cmm_A Ubiquitin-activating en 58.5 7.1 0.00024 46.3 4.5 38 325-373 23-60 (1015)
306 1zk7_A HGII, reductase, mercur 58.3 9 0.00031 40.1 4.9 33 329-373 4-36 (467)
307 2xdo_A TETX2 protein; tetracyc 58.3 8.5 0.00029 39.1 4.6 36 327-374 24-59 (398)
308 3axb_A Putative oxidoreductase 58.1 9.4 0.00032 39.3 4.9 38 324-372 18-55 (448)
309 2vou_A 2,6-dihydroxypyridine h 58.1 10 0.00035 38.5 5.2 35 328-374 4-38 (397)
310 3cgv_A Geranylgeranyl reductas 58.1 8.5 0.00029 38.3 4.5 35 329-375 4-38 (397)
311 3rp8_A Flavoprotein monooxygen 57.8 9.3 0.00032 38.8 4.8 36 327-374 21-56 (407)
312 3l4b_C TRKA K+ channel protien 57.6 7.3 0.00025 36.5 3.7 95 331-445 2-100 (218)
313 3sx6_A Sulfide-quinone reducta 57.5 10 0.00035 39.3 5.1 36 330-374 5-40 (437)
314 2dkn_A 3-alpha-hydroxysteroid 57.3 13 0.00046 34.5 5.4 69 331-421 3-74 (255)
315 3dje_A Fructosyl amine: oxygen 57.2 9.2 0.00032 39.1 4.7 37 329-376 6-42 (438)
316 2uzz_A N-methyl-L-tryptophan o 56.9 8.5 0.00029 38.1 4.2 35 330-376 3-37 (372)
317 3tzq_B Short-chain type dehydr 56.8 13 0.00044 36.0 5.4 78 325-420 7-96 (271)
318 3gg2_A Sugar dehydrogenase, UD 56.8 9.5 0.00033 40.7 4.8 32 330-373 3-34 (450)
319 2gag_B Heterotetrameric sarcos 56.8 11 0.00036 37.8 4.9 36 329-374 21-56 (405)
320 1hdc_A 3-alpha, 20 beta-hydrox 56.7 14 0.00046 35.4 5.5 37 326-373 2-38 (254)
321 1hxh_A 3BETA/17BETA-hydroxyste 56.7 8.8 0.0003 36.6 4.2 37 326-373 3-39 (253)
322 3e48_A Putative nucleoside-dip 56.7 16 0.00055 35.0 6.0 97 331-444 2-106 (289)
323 3iwa_A FAD-dependent pyridine 56.7 7.8 0.00027 40.6 4.1 38 329-376 3-40 (472)
324 2gv8_A Monooxygenase; FMO, FAD 56.6 9.4 0.00032 39.7 4.7 36 328-373 5-40 (447)
325 1c0p_A D-amino acid oxidase; a 56.5 11 0.00039 37.4 5.1 34 329-374 6-39 (363)
326 2x3n_A Probable FAD-dependent 56.3 9 0.00031 38.7 4.3 34 329-374 6-39 (399)
327 1yvv_A Amine oxidase, flavin-c 56.1 9.2 0.00031 37.2 4.2 33 330-374 3-35 (336)
328 1pl8_A Human sorbitol dehydrog 55.9 18 0.00061 36.5 6.5 49 312-372 156-204 (356)
329 2xve_A Flavin-containing monoo 55.3 9.8 0.00033 40.2 4.6 38 330-373 3-40 (464)
330 2p5y_A UDP-glucose 4-epimerase 55.1 19 0.00066 34.8 6.4 98 331-444 2-117 (311)
331 1vdc_A NTR, NADPH dependent th 55.1 8.4 0.00029 37.5 3.8 33 328-372 7-39 (333)
332 2oln_A NIKD protein; flavoprot 54.9 11 0.00037 38.0 4.6 35 330-376 5-39 (397)
333 3ruf_A WBGU; rossmann fold, UD 54.9 8.7 0.0003 37.9 3.9 101 327-444 23-151 (351)
334 2o7s_A DHQ-SDH PR, bifunctiona 54.9 14 0.00047 40.1 5.7 36 326-373 361-396 (523)
335 3urh_A Dihydrolipoyl dehydroge 54.7 10 0.00035 40.0 4.6 34 329-374 25-58 (491)
336 3ktd_A Prephenate dehydrogenas 54.5 14 0.00049 38.1 5.6 89 330-444 9-101 (341)
337 3pid_A UDP-glucose 6-dehydroge 54.5 41 0.0014 36.0 9.3 44 410-459 146-189 (432)
338 3uox_A Otemo; baeyer-villiger 54.4 12 0.00041 40.7 5.2 35 328-374 8-42 (545)
339 1xq6_A Unknown protein; struct 54.4 17 0.00057 33.6 5.5 101 327-444 2-133 (253)
340 1dxl_A Dihydrolipoamide dehydr 54.4 12 0.00041 39.0 5.0 34 329-374 6-39 (470)
341 2r9z_A Glutathione amide reduc 54.3 10 0.00036 39.8 4.6 33 329-373 4-36 (463)
342 2x4g_A Nucleoside-diphosphate- 54.3 25 0.00087 34.2 7.1 96 331-444 15-126 (342)
343 1mv8_A GMD, GDP-mannose 6-dehy 54.3 12 0.00041 39.4 5.0 31 331-373 2-32 (436)
344 1zk4_A R-specific alcohol dehy 54.2 10 0.00036 35.5 4.1 38 325-373 2-39 (251)
345 2yy7_A L-threonine dehydrogena 54.0 11 0.00038 36.3 4.4 99 330-444 3-118 (312)
346 1vl0_A DTDP-4-dehydrorhamnose 54.0 15 0.00052 35.1 5.3 88 326-444 9-113 (292)
347 1trb_A Thioredoxin reductase; 54.0 7 0.00024 37.8 3.0 34 328-373 4-37 (320)
348 3ka7_A Oxidoreductase; structu 53.8 12 0.00041 37.9 4.8 33 331-375 2-34 (425)
349 3nrn_A Uncharacterized protein 53.7 12 0.00042 38.1 4.9 33 331-375 2-34 (421)
350 3i3l_A Alkylhalidase CMLS; fla 53.6 16 0.00055 40.2 6.1 38 327-376 21-58 (591)
351 3gaf_A 7-alpha-hydroxysteroid 53.5 25 0.00087 33.6 6.9 38 325-373 8-45 (256)
352 2q2v_A Beta-D-hydroxybutyrate 53.4 14 0.00046 35.3 4.9 37 326-373 1-37 (255)
353 3un1_A Probable oxidoreductase 53.4 33 0.0011 33.0 7.7 76 327-420 26-107 (260)
354 3sc6_A DTDP-4-dehydrorhamnose 53.3 8.9 0.0003 36.7 3.6 83 331-444 7-106 (287)
355 4gcm_A TRXR, thioredoxin reduc 53.2 11 0.00038 36.6 4.3 32 330-373 7-38 (312)
356 1k0i_A P-hydroxybenzoate hydro 53.1 13 0.00043 37.4 4.8 33 330-374 3-35 (394)
357 2eq6_A Pyruvate dehydrogenase 53.1 9.8 0.00034 39.9 4.1 35 328-374 5-39 (464)
358 3h28_A Sulfide-quinone reducta 53.0 12 0.0004 38.7 4.7 35 330-374 3-37 (430)
359 3r1i_A Short-chain type dehydr 53.0 54 0.0018 31.8 9.2 78 325-420 28-120 (276)
360 3qvo_A NMRA family protein; st 53.0 22 0.00074 33.3 6.2 101 327-444 21-125 (236)
361 3tpc_A Short chain alcohol deh 52.8 33 0.0011 32.6 7.5 77 326-420 4-92 (257)
362 2hqm_A GR, grase, glutathione 52.8 10 0.00035 39.9 4.3 35 328-374 10-44 (479)
363 4ap3_A Steroid monooxygenase; 52.8 11 0.00036 41.1 4.5 35 328-374 20-54 (549)
364 2cul_A Glucose-inhibited divis 52.7 12 0.00043 35.2 4.4 33 329-373 3-35 (232)
365 3kd9_A Coenzyme A disulfide re 52.7 11 0.00039 39.1 4.5 37 329-375 3-39 (449)
366 3n74_A 3-ketoacyl-(acyl-carrie 52.5 14 0.00048 35.0 4.8 78 325-420 5-94 (261)
367 3k31_A Enoyl-(acyl-carrier-pro 52.5 22 0.00074 35.0 6.3 81 324-420 25-119 (296)
368 4g6h_A Rotenone-insensitive NA 52.3 6.2 0.00021 42.4 2.5 32 330-373 43-74 (502)
369 2q1s_A Putative nucleotide sug 52.3 19 0.00064 36.3 5.9 103 326-444 29-151 (377)
370 1dlj_A UDP-glucose dehydrogena 52.2 14 0.00046 38.7 5.0 30 331-373 2-31 (402)
371 3v76_A Flavoprotein; structura 52.2 11 0.00038 39.5 4.3 35 329-375 27-61 (417)
372 3ntd_A FAD-dependent pyridine 52.2 15 0.00051 39.2 5.4 37 330-376 2-38 (565)
373 1mo9_A ORF3; nucleotide bindin 52.1 11 0.00039 40.2 4.5 35 328-374 42-76 (523)
374 2dtx_A Glucose 1-dehydrogenase 52.1 54 0.0019 31.4 9.0 76 326-420 5-85 (264)
375 1q1r_A Putidaredoxin reductase 52.1 14 0.00048 38.4 5.1 37 329-375 4-40 (431)
376 2c5a_A GDP-mannose-3', 5'-epim 52.0 42 0.0014 33.8 8.5 99 328-444 28-145 (379)
377 3k30_A Histamine dehydrogenase 51.8 14 0.00049 41.0 5.4 34 329-374 391-424 (690)
378 3s5w_A L-ornithine 5-monooxyge 51.7 9.9 0.00034 39.3 3.8 39 329-375 30-69 (463)
379 2qae_A Lipoamide, dihydrolipoy 51.7 12 0.00042 39.0 4.6 34 329-374 2-35 (468)
380 3uko_A Alcohol dehydrogenase c 51.5 27 0.00091 35.6 7.0 38 324-372 189-226 (378)
381 3p19_A BFPVVD8, putative blue 51.5 18 0.00061 35.1 5.4 82 324-420 11-98 (266)
382 1yqd_A Sinapyl alcohol dehydro 51.4 30 0.001 35.2 7.3 49 312-372 171-219 (366)
383 4a2c_A Galactitol-1-phosphate 51.4 36 0.0012 33.8 7.8 55 306-372 139-193 (346)
384 1kyq_A Met8P, siroheme biosynt 51.2 9.4 0.00032 38.5 3.5 36 326-373 10-45 (274)
385 1yb1_A 17-beta-hydroxysteroid 51.1 40 0.0014 32.3 7.9 38 325-373 27-64 (272)
386 4gde_A UDP-galactopyranose mut 51.0 14 0.00049 38.3 4.9 23 329-351 10-32 (513)
387 2zcu_A Uncharacterized oxidore 51.0 9.7 0.00033 36.2 3.4 98 331-444 1-104 (286)
388 3m6i_A L-arabinitol 4-dehydrog 51.0 17 0.00059 36.6 5.4 57 305-373 157-213 (363)
389 2wpf_A Trypanothione reductase 50.7 16 0.00055 38.8 5.4 32 329-371 7-38 (495)
390 2wm3_A NMRA-like family domain 50.7 7.9 0.00027 37.4 2.8 101 329-445 5-115 (299)
391 1m6i_A Programmed cell death p 50.7 11 0.00038 40.1 4.1 38 328-375 10-47 (493)
392 1o5i_A 3-oxoacyl-(acyl carrier 50.6 54 0.0018 31.1 8.6 77 325-420 15-92 (249)
393 2yqu_A 2-oxoglutarate dehydrog 50.6 13 0.00044 38.8 4.5 33 330-374 2-34 (455)
394 1zmd_A Dihydrolipoyl dehydroge 50.6 13 0.00043 39.0 4.5 34 329-374 6-39 (474)
395 3f1l_A Uncharacterized oxidore 50.5 35 0.0012 32.4 7.3 38 325-373 8-45 (252)
396 2ew2_A 2-dehydropantoate 2-red 50.4 14 0.00049 35.7 4.6 101 330-448 4-112 (316)
397 1ebd_A E3BD, dihydrolipoamide 50.3 12 0.0004 39.0 4.1 32 330-373 4-35 (455)
398 4eez_A Alcohol dehydrogenase 1 50.2 37 0.0013 33.7 7.6 48 314-373 150-197 (348)
399 1oi7_A Succinyl-COA synthetase 50.1 16 0.00056 36.7 5.0 148 329-515 7-162 (288)
400 1fl2_A Alkyl hydroperoxide red 50.1 12 0.00042 35.9 4.0 32 330-373 2-33 (310)
401 1sb8_A WBPP; epimerase, 4-epim 49.8 18 0.00063 35.7 5.3 101 327-444 25-153 (352)
402 1ges_A Glutathione reductase; 49.7 11 0.00037 39.4 3.8 33 329-373 4-36 (450)
403 2pnf_A 3-oxoacyl-[acyl-carrier 49.7 32 0.0011 31.9 6.7 38 325-373 3-40 (248)
404 1nff_A Putative oxidoreductase 49.6 25 0.00087 33.7 6.2 38 325-373 3-40 (260)
405 3e03_A Short chain dehydrogena 49.5 54 0.0018 31.6 8.5 38 325-373 2-39 (274)
406 3sxp_A ADP-L-glycero-D-mannohe 49.5 39 0.0013 33.5 7.7 106 325-444 6-138 (362)
407 2a87_A TRXR, TR, thioredoxin r 49.3 11 0.00037 37.1 3.5 34 328-373 13-46 (335)
408 1xg5_A ARPG836; short chain de 49.1 37 0.0013 32.6 7.3 37 326-373 29-65 (279)
409 4b63_A L-ornithine N5 monooxyg 49.0 9.9 0.00034 40.6 3.4 42 332-373 42-85 (501)
410 4gqa_A NAD binding oxidoreduct 49.0 26 0.00089 36.1 6.5 101 317-432 13-118 (412)
411 2ehd_A Oxidoreductase, oxidore 49.0 31 0.001 32.0 6.4 34 329-373 5-38 (234)
412 2a8x_A Dihydrolipoyl dehydroge 48.9 13 0.00043 38.9 4.2 33 329-373 3-35 (464)
413 4a5l_A Thioredoxin reductase; 48.8 12 0.00041 36.0 3.7 31 331-373 6-36 (314)
414 3h7a_A Short chain dehydrogena 48.7 39 0.0013 32.2 7.3 77 326-420 4-94 (252)
415 2zb4_A Prostaglandin reductase 48.7 29 0.001 34.8 6.7 56 307-373 137-195 (357)
416 3qj4_A Renalase; FAD/NAD(P)-bi 48.6 11 0.00036 37.4 3.4 35 330-373 2-36 (342)
417 2v3a_A Rubredoxin reductase; a 48.6 13 0.00045 37.7 4.1 35 329-373 4-38 (384)
418 3cgb_A Pyridine nucleotide-dis 48.4 13 0.00045 39.1 4.3 37 330-376 37-73 (480)
419 1onf_A GR, grase, glutathione 48.4 14 0.00046 39.3 4.4 33 330-374 3-35 (500)
420 2ydy_A Methionine adenosyltran 48.3 32 0.0011 33.2 6.7 92 329-444 2-110 (315)
421 1fmc_A 7 alpha-hydroxysteroid 48.2 22 0.00077 33.2 5.4 38 325-373 7-44 (255)
422 1lvl_A Dihydrolipoamide dehydr 48.2 15 0.00051 38.5 4.6 33 329-373 5-37 (458)
423 2qcu_A Aerobic glycerol-3-phos 48.1 15 0.0005 39.1 4.6 34 329-374 3-36 (501)
424 3o0h_A Glutathione reductase; 48.1 16 0.00054 38.5 4.8 33 329-373 26-58 (484)
425 2weu_A Tryptophan 5-halogenase 48.1 12 0.00042 39.4 3.9 37 330-375 3-39 (511)
426 2bry_A NEDD9 interacting prote 48.0 16 0.00055 39.0 4.8 37 328-376 91-127 (497)
427 3l8k_A Dihydrolipoyl dehydroge 47.9 16 0.00054 38.3 4.7 35 329-375 4-38 (466)
428 3rwb_A TPLDH, pyridoxal 4-dehy 47.9 21 0.00072 34.0 5.2 38 325-373 2-39 (247)
429 3oc4_A Oxidoreductase, pyridin 47.7 13 0.00043 38.8 3.9 36 330-375 3-38 (452)
430 3oig_A Enoyl-[acyl-carrier-pro 47.7 34 0.0012 32.5 6.7 80 325-420 3-98 (266)
431 2e4g_A Tryptophan halogenase; 47.5 16 0.00056 39.3 4.9 38 329-375 25-62 (550)
432 3lad_A Dihydrolipoamide dehydr 47.4 18 0.0006 37.9 5.0 33 329-373 3-35 (476)
433 2gn4_A FLAA1 protein, UDP-GLCN 47.2 14 0.0005 37.0 4.1 101 325-444 17-142 (344)
434 3ak4_A NADH-dependent quinucli 47.2 22 0.00076 33.8 5.3 37 326-373 9-45 (263)
435 1lqt_A FPRA; NADP+ derivative, 47.1 17 0.00059 38.4 4.9 38 329-373 3-42 (456)
436 2qa2_A CABE, polyketide oxygen 47.1 16 0.00054 39.1 4.6 34 328-373 11-44 (499)
437 3op4_A 3-oxoacyl-[acyl-carrier 47.1 15 0.00051 35.0 4.1 78 325-420 5-94 (248)
438 2aqj_A Tryptophan halogenase, 47.1 16 0.00054 39.1 4.6 38 329-375 5-42 (538)
439 3dqp_A Oxidoreductase YLBE; al 47.1 33 0.0011 31.4 6.3 94 331-444 2-106 (219)
440 2fzw_A Alcohol dehydrogenase c 47.0 39 0.0013 34.1 7.3 37 325-372 187-223 (373)
441 1v59_A Dihydrolipoamide dehydr 46.9 17 0.00058 38.0 4.7 34 329-374 5-38 (478)
442 2bc0_A NADH oxidase; flavoprot 46.8 21 0.00071 37.7 5.5 37 329-374 35-71 (490)
443 2e1m_A L-glutamate oxidase; L- 46.8 18 0.0006 37.9 4.8 35 327-373 42-76 (376)
444 1w4x_A Phenylacetone monooxyge 46.7 17 0.00059 39.0 4.9 35 328-374 15-49 (542)
445 3c4a_A Probable tryptophan hyd 46.7 17 0.00059 36.6 4.7 33 331-373 2-34 (381)
446 3gwf_A Cyclohexanone monooxyge 46.7 14 0.00047 40.2 4.1 36 328-374 7-42 (540)
447 1p0f_A NADP-dependent alcohol 46.7 39 0.0013 34.1 7.3 36 326-372 189-224 (373)
448 4ep1_A Otcase, ornithine carba 46.7 1.1E+02 0.0039 31.7 10.9 129 269-419 123-257 (340)
449 2cdc_A Glucose dehydrogenase g 46.6 49 0.0017 33.4 8.0 33 329-373 181-213 (366)
450 3c4n_A Uncharacterized protein 46.5 18 0.00061 37.0 4.8 35 330-374 37-71 (405)
451 3rkr_A Short chain oxidoreduct 46.4 46 0.0016 31.7 7.4 76 326-419 26-116 (262)
452 3st7_A Capsular polysaccharide 46.1 47 0.0016 33.1 7.7 79 331-444 2-94 (369)
453 2zat_A Dehydrogenase/reductase 46.1 60 0.0021 30.7 8.1 39 324-373 9-47 (260)
454 3ihm_A Styrene monooxygenase A 46.0 15 0.00052 38.1 4.2 32 330-373 23-54 (430)
455 1xhc_A NADH oxidase /nitrite r 46.0 13 0.00043 38.0 3.5 35 329-376 8-42 (367)
456 4fk1_A Putative thioredoxin re 45.9 17 0.00057 35.4 4.3 33 329-373 6-38 (304)
457 1ek6_A UDP-galactose 4-epimera 45.9 16 0.00055 35.8 4.2 101 330-444 3-132 (348)
458 1nhp_A NADH peroxidase; oxidor 45.9 15 0.00052 38.1 4.2 35 331-375 2-36 (447)
459 4dry_A 3-oxoacyl-[acyl-carrier 45.8 25 0.00084 34.4 5.5 79 324-420 28-122 (281)
460 1o94_A Tmadh, trimethylamine d 45.8 17 0.0006 40.8 4.9 35 328-374 388-422 (729)
461 3v8b_A Putative dehydrogenase, 45.7 36 0.0012 33.2 6.6 77 326-420 25-116 (283)
462 2nm0_A Probable 3-oxacyl-(acyl 45.7 46 0.0016 31.9 7.3 77 325-420 17-98 (253)
463 1kol_A Formaldehyde dehydrogen 45.7 37 0.0013 34.7 7.0 49 312-372 170-218 (398)
464 4imr_A 3-oxoacyl-(acyl-carrier 45.6 75 0.0026 30.8 8.9 76 326-419 30-119 (275)
465 2bi7_A UDP-galactopyranose mut 45.5 18 0.00062 37.2 4.6 34 329-374 3-36 (384)
466 1pjq_A CYSG, siroheme synthase 45.5 20 0.00067 38.3 5.0 26 326-351 9-34 (457)
467 1ojt_A Surface protein; redox- 45.5 17 0.00059 38.2 4.6 34 329-374 6-39 (482)
468 3pxx_A Carveol dehydrogenase; 45.5 51 0.0017 31.5 7.6 38 326-374 7-44 (287)
469 1s3e_A Amine oxidase [flavin-c 45.3 18 0.00061 38.2 4.6 34 329-374 4-37 (520)
470 3sx2_A Putative 3-ketoacyl-(ac 45.2 51 0.0018 31.5 7.6 40 324-374 8-47 (278)
471 2o23_A HADH2 protein; HSD17B10 45.2 29 0.00098 32.7 5.7 78 325-420 8-97 (265)
472 1wly_A CAAR, 2-haloacrylate re 45.1 36 0.0012 33.8 6.7 50 312-373 129-179 (333)
473 2cdu_A NADPH oxidase; flavoenz 45.1 18 0.00062 37.5 4.6 34 331-374 2-35 (452)
474 2fwm_X 2,3-dihydro-2,3-dihydro 45.1 67 0.0023 30.3 8.3 76 326-420 4-85 (250)
475 2bgk_A Rhizome secoisolaricire 45.0 16 0.00054 34.8 3.8 38 325-373 12-49 (278)
476 3grk_A Enoyl-(acyl-carrier-pro 45.0 24 0.00082 34.7 5.3 37 325-373 27-66 (293)
477 1rpn_A GDP-mannose 4,6-dehydra 44.9 37 0.0013 33.0 6.6 106 327-444 12-138 (335)
478 3rih_A Short chain dehydrogena 44.9 45 0.0015 32.9 7.2 38 325-373 37-74 (293)
479 3grf_A Ornithine carbamoyltran 44.8 71 0.0024 33.1 8.9 136 261-415 91-240 (328)
480 3tox_A Short chain dehydrogena 44.8 34 0.0012 33.4 6.3 37 326-373 5-41 (280)
481 1e3j_A NADP(H)-dependent ketos 44.7 28 0.00096 34.9 5.8 48 312-372 153-200 (352)
482 1t2a_A GDP-mannose 4,6 dehydra 44.7 41 0.0014 33.5 7.0 101 330-444 25-156 (375)
483 2vvm_A Monoamine oxidase N; FA 44.4 18 0.00063 37.6 4.5 32 330-373 40-71 (495)
484 3dk9_A Grase, GR, glutathione 44.4 17 0.00059 38.0 4.3 34 328-373 19-52 (478)
485 1f8f_A Benzyl alcohol dehydrog 44.3 45 0.0015 33.7 7.3 50 312-372 174-223 (371)
486 3f9i_A 3-oxoacyl-[acyl-carrier 44.3 12 0.00042 35.2 2.9 79 324-420 9-95 (249)
487 3ihg_A RDME; flavoenzyme, anth 44.3 16 0.00055 38.8 4.2 35 328-374 4-38 (535)
488 3qiv_A Short-chain dehydrogena 44.1 36 0.0012 32.0 6.2 77 325-419 5-96 (253)
489 3rd5_A Mypaa.01249.C; ssgcid, 44.0 19 0.00064 35.1 4.3 77 326-420 13-97 (291)
490 2qa1_A PGAE, polyketide oxygen 44.0 19 0.00066 38.4 4.7 36 326-373 8-43 (500)
491 2d1y_A Hypothetical protein TT 43.7 30 0.001 32.9 5.6 79 326-420 3-88 (256)
492 1fec_A Trypanothione reductase 43.5 24 0.00082 37.4 5.3 32 329-371 3-34 (490)
493 3tsc_A Putative oxidoreductase 43.5 54 0.0018 31.5 7.4 39 325-374 7-45 (277)
494 3t7c_A Carveol dehydrogenase; 43.5 1E+02 0.0035 30.1 9.5 38 325-373 24-61 (299)
495 1xdi_A RV3303C-LPDA; reductase 43.4 18 0.00062 38.2 4.3 36 330-374 3-38 (499)
496 3gvc_A Oxidoreductase, probabl 43.4 14 0.00048 36.1 3.3 78 325-420 25-114 (277)
497 3cmm_A Ubiquitin-activating en 43.3 15 0.0005 43.6 3.9 42 326-373 422-463 (1015)
498 2wsb_A Galactitol dehydrogenas 43.2 23 0.00079 33.1 4.7 38 325-373 7-44 (254)
499 1e3i_A Alcohol dehydrogenase, 43.1 41 0.0014 34.0 6.8 37 325-372 192-228 (376)
500 3fr7_A Putative ketol-acid red 43.1 45 0.0015 36.9 7.4 28 326-353 50-78 (525)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=4.7e-206 Score=1656.97 Aligned_cols=539 Identities=53% Similarity=0.960 Sum_probs=531.5
Q ss_pred cccccccCCCCCcCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHHHhhhc
Q 007802 49 SGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDN 128 (589)
Q Consensus 49 ~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~l~ky~~L~~L~~~Ne~LFy~ll~~~ 128 (589)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|||+||++++++|+||+||++||++||+||||++.+|
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~ 81 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSD 81 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhhh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCcccccCCCCCCCcccchhhh
Q 007802 129 VEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGK 208 (589)
Q Consensus 129 ~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~~GmgI~iGK 208 (589)
++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|++||||||||||||||||++||+|||||
T Consensus 82 ~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGK 161 (555)
T 1gq2_A 82 IERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGK 161 (555)
T ss_dssp HHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHHH
T ss_pred HHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH
Q 007802 209 LSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF 288 (589)
Q Consensus 209 l~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af 288 (589)
++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++|||
T Consensus 162 l~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~af 241 (555)
T 1gq2_A 162 LALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAF 241 (555)
T ss_dssp HHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHH
T ss_pred HHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE
Q 007802 289 ELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW 368 (589)
Q Consensus 289 ~iL~ryr~~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~ 368 (589)
+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+++|+++ |+|+|||++|||
T Consensus 242 ~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i~ 320 (555)
T 1gq2_A 242 RLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRIW 320 (555)
T ss_dssp HHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTEE
T ss_pred HHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 999999999999
Q ss_pred EEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 369 LVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 369 ~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
|||++|||+++|. +|+++|++||++..+.++|+|||+.+|||||||+|+++|+||||+||+|+++|+|||||||||||+
T Consensus 321 ~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~ 399 (555)
T 1gq2_A 321 MVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTS 399 (555)
T ss_dssp EEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGG
T ss_pred EEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9999999999996 599999999998767789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHhccCc
Q 007802 449 QSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQ 527 (589)
Q Consensus 449 ~~E~t~eda~~wT~GraifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~~ 527 (589)
++||+||||++||+|+|||||||||+||+| +||+++||||||+|||||||+|+++++|++|||+|+++||+|||+++++
T Consensus 400 ~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~~ 479 (555)
T 1gq2_A 400 KAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSE 479 (555)
T ss_dssp GCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCCH
T ss_pred ccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007802 528 EHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 589 (589)
Q Consensus 528 ~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~GvA~~~~~p~dl~~~i~~~mw~P~Y~~~~ 589 (589)
+++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|++++
T Consensus 480 ~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 480 ENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred ccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 99999999999999999999999999999999999987777899999999999999999873
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=2.2e-205 Score=1660.03 Aligned_cols=544 Identities=49% Similarity=0.869 Sum_probs=534.9
Q ss_pred ccccccccccccCCCCCcCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHH
Q 007802 44 TVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYK 123 (589)
Q Consensus 44 ~~~~~~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~l~ky~~L~~L~~~Ne~LFy~ 123 (589)
..+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|||+||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccccc--ccHHHHHhcCCCCCeeEEEEecCcccccCCCCCCCc
Q 007802 124 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQG 201 (589)
Q Consensus 124 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~--g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~~G 201 (589)
++.+|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++++|||.++|++||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCceeeEeec
Q 007802 202 MGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFED 281 (589)
Q Consensus 202 mgI~iGKl~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~~lIq~ED 281 (589)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHH
Q 007802 282 FANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIE 361 (589)
Q Consensus 282 f~~~~Af~iL~ryr~~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~e 361 (589)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+++|++ +|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 499999
Q ss_pred hhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007802 362 EARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 441 (589)
Q Consensus 362 eA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 441 (589)
||++||||||++|||+++|. +|+++|++||++..+.++|+|||+.+|||||||+|+++|+||||+||+||++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 59999999999877778999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007802 442 ALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEAL 521 (589)
Q Consensus 442 aLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aL 521 (589)
||||||+++||+||||++||+|+|||||||||+||+|+||+++||||||+|||||||||+++++|++|||+|+++||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCcccCCCCCccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007802 522 AAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 589 (589)
Q Consensus 522 A~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~GvA~~~~~p~dl~~~i~~~mw~P~Y~~~~ 589 (589)
|++++++++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|++++
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999987778899999999999999999873
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=4e-205 Score=1654.00 Aligned_cols=541 Identities=51% Similarity=0.928 Sum_probs=532.1
Q ss_pred ccccccccCCCCCcCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHHHhhh
Q 007802 48 ASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLID 127 (589)
Q Consensus 48 ~~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~t~e~Q~~R~~~~~~~~~~~l~ky~~L~~L~~~Ne~LFy~ll~~ 127 (589)
.+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|||+||++++++|+||+||++||++||+||||++.+
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCcccccCCCCCCCcccchhh
Q 007802 128 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVG 207 (589)
Q Consensus 128 ~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~~GmgI~iG 207 (589)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|++||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccH
Q 007802 208 KLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA 287 (589)
Q Consensus 208 Kl~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~A 287 (589)
|++|||+||||||++|||||||+||||++||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007802 288 FELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 367 (589)
Q Consensus 288 f~iL~ryr~~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i 367 (589)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+++|+++ |+|+|||++||
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999984 99999999999
Q ss_pred EEEcccCcccCCcccCCchhchhhhcccCCC--CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 368 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 368 ~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
||||++|||+++|.++|+++|++||++..+. ++|+|||+.+|||||||+|+++|+||||+||+|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999435999999999987666 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHhc
Q 007802 446 PTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQ 524 (589)
Q Consensus 446 Pt~~~E~t~eda~~wT~GraifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~ 524 (589)
||+++||+||||++||+|+|||||||||+||+| +||+++||||||+|+|||||+|+++++|++|||+|+++||+|||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007802 525 VTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 589 (589)
Q Consensus 525 v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~GvA~~~~~p~dl~~~i~~~mw~P~Y~~~~ 589 (589)
++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|.|++++
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999987778899999999999999999863
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=4.9e-121 Score=976.21 Aligned_cols=380 Identities=31% Similarity=0.414 Sum_probs=343.4
Q ss_pred cccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCcccccCCCCCC-Ccccchhhh
Q 007802 130 EELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGC-QGMGIPVGK 208 (589)
Q Consensus 130 ~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~-~GmgI~iGK 208 (589)
.+.|||+||||||++|++|+ +|+++++++..+| ++|||||||||||||||||+ +|||||+||
T Consensus 58 ~~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGK 120 (487)
T 3nv9_A 58 FNWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGK 120 (487)
T ss_dssp GGGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHH
T ss_pred HHHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhH
Confidence 34599999999999999997 4677777666666 48999999999999999999 599999999
Q ss_pred HHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH
Q 007802 209 LSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF 288 (589)
Q Consensus 209 l~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af 288 (589)
++|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. ||||||+++|||
T Consensus 121 l~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap~af 176 (487)
T 3nv9_A 121 ALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQPNCY 176 (487)
T ss_dssp HHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTTHHH
T ss_pred HHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCchHH
Confidence 99999999999 999999999755 46664 3333 466666666655 999999999999
Q ss_pred HHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCe
Q 007802 289 ELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKK 366 (589)
Q Consensus 289 ~iL~ryr~--~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~ 366 (589)
+||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++ +|
T Consensus 177 ~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~ 247 (487)
T 3nv9_A 177 KILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KK 247 (487)
T ss_dssp HHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GG
T ss_pred HHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----cc
Confidence 99999998 799999999999999999999999999999999999999999999999999975 49986 89
Q ss_pred EEEEcccCcccCCcccCCc-----hhchhhhccc--CCCCCHHHHHhccCCcEEEeecCC-CCCCCHHHHHHHHcCCCCc
Q 007802 367 IWLVDSKGLIVSSRKESLQ-----HFKKPWAHEH--APIKSLLDAVKAIKPTMLMGTSGV-GKTFTKEVVEAMASFNEKP 438 (589)
Q Consensus 367 i~~vD~~GLv~~~r~~~l~-----~~k~~fa~~~--~~~~~L~e~V~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erP 438 (589)
|||||++|||+++|.+ |. ++|.+||++. +...+|+|||+. +|||||+|++ +|+||||+||+|+ +||
T Consensus 248 i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~P 321 (487)
T 3nv9_A 248 IVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKP 321 (487)
T ss_dssp EEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSC
T ss_pred EEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCC
Confidence 9999999999999954 63 4667888864 356799999998 7999999977 7999999999996 899
Q ss_pred EEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHH
Q 007802 439 VIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAAS 518 (589)
Q Consensus 439 IIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA 518 (589)
||||||||| +||+||||++ +|+||||||+ +++|||+||+|+|||||+|+++++|++|||+|+++||
T Consensus 322 IIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA 387 (487)
T 3nv9_A 322 IVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAAS 387 (487)
T ss_dssp EEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred EEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHH
Confidence 999999999 7999999998 6999999994 5779999999999999999999999999999999999
Q ss_pred HHHHhccCcccCCCCCccCCCCCchhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007802 519 EALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRL-PRPKDLVSYAESCM 580 (589)
Q Consensus 519 ~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~GvA~~~-~~p~dl~~~i~~~m 580 (589)
++||++++++++..+.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++++
T Consensus 388 ~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 388 RALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999 689999999999999999999876 67889999998765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=2.2e-112 Score=899.96 Aligned_cols=361 Identities=29% Similarity=0.424 Sum_probs=332.3
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCcccccCCCCC
Q 007802 119 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLG 198 (589)
Q Consensus 119 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG 198 (589)
.+++++..++. |+|||+||||||++|++|++ |+++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~~-------------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIAK-------------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHHH-------------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHHh-------------CHHHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 34555566665 55899999999999999873 455555 7899999999999999999999999
Q ss_pred CC-cccchhhhHHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCc-ee
Q 007802 199 CQ-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VL 276 (589)
Q Consensus 199 ~~-GmgI~iGKl~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~-~l 276 (589)
++ ||+||+||+.||++||||| |+|||||+|| +||||+++++.| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eEeecCCCccHHHHHHHHcCC--CceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007802 277 IQFEDFANHNAFELLSKYSSS--HLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (589)
Q Consensus 277 Iq~EDf~~~~Af~iL~ryr~~--~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~ 354 (589)
||||||+++|||++|+|||++ +|||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 999999999999999999974 999999999999999999999999999999999999999999999999999874
Q ss_pred ccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCC---CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHH
Q 007802 355 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAM 431 (589)
Q Consensus 355 ~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~M 431 (589)
|. ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|+|||+|+ ||+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 74 899999999999999933599999999997442 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCH
Q 007802 432 ASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRD 511 (589)
Q Consensus 432 a~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd 511 (589)
+ ++|||||||||| +||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 8 899999999999 89999999999 99999999 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcccCCCCCccCCCCCchhhHHHHHHHHHHHHHHc
Q 007802 512 EMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDL 560 (589)
Q Consensus 512 ~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~ 560 (589)
+|+++||++||++++++++..+.|||++++ |+||.+||.||+++|+++
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999865
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=5.3e-107 Score=857.63 Aligned_cols=354 Identities=30% Similarity=0.436 Sum_probs=331.0
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCcccccCCCCC
Q 007802 119 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLG 198 (589)
Q Consensus 119 ~LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG 198 (589)
..++++..++.++ |||+||||||++|++|+ ++| ++++ +|+.++++++|||||+|||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p----------~~v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDP----------EKTY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCG----------GGHH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCH----------HHHH----hhcccCCeEEEEECCccccCCCccc
Confidence 5677888888777 89999999999999987 455 4444 7899999999999999999999999
Q ss_pred CC-cccchhhhHHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCc-ee
Q 007802 199 CQ-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VL 276 (589)
Q Consensus 199 ~~-GmgI~iGKl~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~-~l 276 (589)
++ ||+||+||+.||++||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eEeecCCCccHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007802 277 IQFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (589)
Q Consensus 277 Iq~EDf~~~~Af~iL~ryr~--~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~ 354 (589)
||||||+++|||++|+|||+ ++|||||||||||+|++||+++|+|++|++|+|+||||+|||+||+++|++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred ccCCCHHhhcCeEEEEcccCcccCCcccC-CchhchhhhcccCC---CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHH
Q 007802 355 QTKAPIEEARKKIWLVDSKGLIVSSRKES-LQHFKKPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEA 430 (589)
Q Consensus 355 ~~G~s~eeA~~~i~~vD~~GLv~~~r~~~-l~~~k~~fa~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~ 430 (589)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|+|+|+. +|+|||+|+ ||+||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999997432 4689999997 899999999 89999999999
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeCCCCccccccchhhhHHHHHhCCcccC
Q 007802 431 MASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVR 510 (589)
Q Consensus 431 Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~It 510 (589)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 99999999999 99999999 589999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhccCcccCCCCCccCCCCCchhhHHHHHHHHHHHH
Q 007802 511 DEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKA 557 (589)
Q Consensus 511 d~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A 557 (589)
|+|+++||++||+++ ++..+.|||++++ |+||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 6778999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=5.8e-86 Score=708.53 Aligned_cols=384 Identities=30% Similarity=0.432 Sum_probs=348.3
Q ss_pred hhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCcccccCCCCCC
Q 007802 120 LFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGC 199 (589)
Q Consensus 120 LFy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyls~~d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~ 199 (589)
.++++..++.+ +|||+||||||++|++|++ |++++++ |+.++++++|||||+|||||||+|.
T Consensus 22 ~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~ 83 (439)
T 2dvm_A 22 VIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGP 83 (439)
T ss_dssp EEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCH
T ss_pred EEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceec
Confidence 45566666655 4899999999999999983 7777774 8889999999999999999999999
Q ss_pred C-cccchhhhHHHHhhhcCCCCCCeeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCc-eee
Q 007802 200 Q-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VLI 277 (589)
Q Consensus 200 ~-GmgI~iGKl~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~-~lI 277 (589)
. ++|+++||++||++||||| ++|++||+. | .|+|+++|+..+ |+ ..|
T Consensus 84 hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~Gi 132 (439)
T 2dvm_A 84 LAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSEE
T ss_pred cccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcEE
Confidence 6 8999999999999999999 999999992 2 588888888766 55 679
Q ss_pred EeecCCCccHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007802 278 QFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (589)
Q Consensus 278 q~EDf~~~~Af~iL~ryr~--~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~ 355 (589)
|||||+.||||++|++|++ ++|+||||+||||.+.++|+++|++..|++|+++|+||+|||+||.+|+.+|..
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~----- 207 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE----- 207 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----
Confidence 9999999999999999986 699999999999999999999999999999999999999999999999999976
Q ss_pred cCCCHHhhcCeEEEEc----ccCcccCCcccC---CchhchhhhcccC---CCCCHHHHHhccCCcEEEeecCCC-CCCC
Q 007802 356 TKAPIEEARKKIWLVD----SKGLIVSSRKES---LQHFKKPWAHEHA---PIKSLLDAVKAIKPTMLMGTSGVG-KTFT 424 (589)
Q Consensus 356 ~G~s~eeA~~~i~~vD----~~GLv~~~r~~~---l~~~k~~fa~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft 424 (589)
.|+++ ++||++| ++||+++. .. |.+++++|++... ...+|.|+++. +|+|||+|+.+ |+|+
T Consensus 208 ~G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~ 279 (439)
T 2dvm_A 208 AGVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIK 279 (439)
T ss_dssp TTCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSC
T ss_pred cCCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCC
Confidence 38753 7899999 99999887 24 7788889987532 24689999986 89999999985 8999
Q ss_pred HHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeCCCCccccccchhhhHHHHHh
Q 007802 425 KEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIIS 504 (589)
Q Consensus 425 eevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~ 504 (589)
+++++.|+ ++||||+||||+ +||.+++|.+| |++++||| +++.|+|+||+|+|||||+|++++
T Consensus 280 ~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~ 342 (439)
T 2dvm_A 280 PQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDV 342 (439)
T ss_dssp HHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHT
T ss_pred hHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhc
Confidence 99999886 799999999999 89999999998 89999999 589999999999999999999999
Q ss_pred CCcccCHHHHHHHHHHHHhccCcccCCCCCccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCC
Q 007802 505 GAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPM 584 (589)
Q Consensus 505 ~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~VA~aVa~~A~~~GvA~~~~~p~dl~~~i~~~mw~P~ 584 (589)
+|++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.||+++|+++|+|+..++|+|+.+|+++.||.+.
T Consensus 343 ~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~ 419 (439)
T 2dvm_A 343 RARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYE 419 (439)
T ss_dssp TCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhH
Confidence 999999999999999999999876 68999999999 999999999999999999999877778899999999999875
Q ss_pred C
Q 007802 585 Y 585 (589)
Q Consensus 585 Y 585 (589)
|
T Consensus 420 ~ 420 (439)
T 2dvm_A 420 N 420 (439)
T ss_dssp H
T ss_pred H
Confidence 4
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.82 E-value=4.5e-08 Score=105.36 Aligned_cols=168 Identities=10% Similarity=0.199 Sum_probs=124.7
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHHHH---------------------HHHc-------CCCcee-
Q 007802 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELL---------------------SKYS-------SSHLVF- 301 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~iL---------------------~ryr-------~~~~~F- 301 (589)
-+-|+|+..++..+.. ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 3567888888776642 345677665 44443333222 3333 269999
Q ss_pred ---------ccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 302 ---------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 302 ---------nDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |+ +++.+|+
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 899999999999999765 79999999999999999999999988642 64 5888887
Q ss_pred cCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 007802 373 KGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSE 451 (589)
Q Consensus 373 ~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E 451 (589)
+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 521 111121 11123579999985 99999998888999999999996 678999999997 88
Q ss_pred CCHHHH
Q 007802 452 CTAEEA 457 (589)
Q Consensus 452 ~t~eda 457 (589)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887665
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.78 E-value=1.9e-08 Score=108.29 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=105.2
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007802 296 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 365 (589)
Q Consensus 296 ~~~~~F----------nDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~ 365 (589)
..+|+| .|++.||+-+++.|++. .++..|.+.+|+|+|.|..|.++|+.+... |+
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 89999999999999964 569999999999999999999999988653 63
Q ss_pred eEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 366 KIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 366 ~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
+++++|++. .+...|. ......+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 1111111 11123589999986 99999988888999999999995 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 007802 445 NPTSQSECTAEEAYT 459 (589)
Q Consensus 445 NPt~~~E~t~eda~~ 459 (589)
++. .|+.++.+.+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.18 E-value=8.2e-07 Score=94.19 Aligned_cols=218 Identities=19% Similarity=0.250 Sum_probs=128.6
Q ss_pred ccccHHHHHhcCCCCCeeEEEEecCcccccCCCCCCC--cccchhhhHHHHhhhcCCCCCCeeeEEeecCCCccccccCc
Q 007802 164 EKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDE 241 (589)
Q Consensus 164 d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI~P~~~lPI~LDvGTnn~~LL~Dp 241 (589)
++..++++.++ ..+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 44556666554 3589999999999999999865 8888887 66665 2 5777665311
Q ss_pred ccccccccCCChhhHHHHHHHHHHHHHHhcCCceeeEeecCC-CccHHHHHHHHc-CCCceec-cCCC----------ch
Q 007802 242 FYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFA-NHNAFELLSKYS-SSHLVFN-DDIQ----------GT 308 (589)
Q Consensus 242 ~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~-~~~Af~iL~ryr-~~~~~Fn-DDiQ----------GT 308 (589)
.+.+..+++ ...+|.+=..+ ++. .++..+ ..+.+|+ +.+. .+
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPE---LMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred -------------------HHHHHHhcC---CCcEEEEecCCCCHH---HHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 233333322 11223222221 222 333332 4666663 2222 45
Q ss_pred HHHHHHHHHHHHHHh----CC----------CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 309 ASVVLAGILSALKLV----GG----------TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 309 aaV~lAgll~Alr~~----g~----------~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
....+|| .+|++.. ++ .+.+.+|+|+|+|.+|.++++.+.. .|. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH
Confidence 5555555 3344332 22 2568999999999999999987754 262 588899864
Q ss_pred cccCCcccCCch------------hchhhhcccCC------CCCHHHHHhccCCcEEEeecCCC-----CCCCHHHHHHH
Q 007802 375 LIVSSRKESLQH------------FKKPWAHEHAP------IKSLLDAVKAIKPTMLMGTSGVG-----KTFTKEVVEAM 431 (589)
Q Consensus 375 Lv~~~r~~~l~~------------~k~~fa~~~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Fteevv~~M 431 (589)
-..... ..+.. .+..|++.... ..+|.+.++. .|++|++...+ .+++++.++.|
T Consensus 206 ~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 321100 00100 00012211000 0147788875 89999996443 67899999999
Q ss_pred HcCCCCcEEEecCCCC
Q 007802 432 ASFNEKPVIFALSNPT 447 (589)
Q Consensus 432 a~~~erPIIFaLSNPt 447 (589)
. +..+|+-+|+|.
T Consensus 283 k---~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K---AGSVIVDLAAQN 295 (401)
T ss_dssp C---TTCEEEETTGGG
T ss_pred C---CCcEEEEEcCCC
Confidence 6 678999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.84 E-value=0.0004 Score=75.35 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=98.2
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007802 296 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 365 (589)
Q Consensus 296 ~~~~~F----------nDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~ 365 (589)
..+|+| .|+..||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 5778999999888885 5679999999999999999999999988542 64
Q ss_pred eEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 366 KIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 366 ~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
+++.+|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 5887776421 101111 11123579999986 99999988888899999999995 788998888
Q ss_pred CCCCCCCCCHHHHh
Q 007802 445 NPTSQSECTAEEAY 458 (589)
Q Consensus 445 NPt~~~E~t~eda~ 458 (589)
+.. .|+..+...
T Consensus 335 Rgd--vEID~~aL~ 346 (464)
T 3n58_A 335 HFD--NEIQVAALR 346 (464)
T ss_dssp SST--TTBTCGGGT
T ss_pred CCC--cccCHHHHH
Confidence 876 666665443
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.69 E-value=8.3e-05 Score=81.24 Aligned_cols=132 Identities=14% Similarity=0.212 Sum_probs=99.9
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007802 296 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 365 (589)
Q Consensus 296 ~~~~~F----------nDDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~ 365 (589)
..+|+| .|++.||+..++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6889999999999886 789999999999999999888888887754 363
Q ss_pred eEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 366 KIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 366 ~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
+++++|++.. + ... .+...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~----Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQ----ATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHH----HHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHH----HHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887521 0 100 01111122456666664 89999988888899999999885 6889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 007802 446 PTSQSECTAEEAYTW 460 (589)
Q Consensus 446 Pt~~~E~t~eda~~w 460 (589)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.19 E-value=0.0043 Score=64.92 Aligned_cols=229 Identities=14% Similarity=0.124 Sum_probs=121.8
Q ss_pred ccccHHHHHhcCCCCCeeEEEEecCcccccCCCCCCC--cccchhhhHHHHhhhcCCCCCCeeeEEeecCCC-----ccc
Q 007802 164 EKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLSLYTALGGLRPSACLPITIDVGTN-----NEQ 236 (589)
Q Consensus 164 d~g~i~~il~nwp~~~v~iiVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI~P~~~lPI~LDvGTn-----n~~ 236 (589)
.+..++++.+. ..+|+|.++++...|+.|.... |..|..++-.++ ++.| |+|.+.+- .++
T Consensus 19 ~P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHH
Confidence 34455555553 4689999999999999997754 777877766665 3333 66766543 121
Q ss_pred c---c-cCcccccccccCCChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHHHHHHHcCCCceeccCCCchHHHH
Q 007802 237 L---L-NDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVV 312 (589)
Q Consensus 237 L---L-~Dp~YlG~r~~R~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~iL~ryr~~~~~FnDDiQGTaaV~ 312 (589)
. + ..-.+++.-|.-. +. +.++++.++ |- .++.+|-.....+ ...++.|+ ....
T Consensus 86 ~i~~l~~~~~~i~~~~~~~-----~~---~~~~~~~~~-gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGALT-----NR---PVVEALTKR-KI-TAYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp GGGGSCTTCEEEEECCGGG-----CH---HHHHHHHHT-TC-EEEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHhhccCCEEEEEecccC-----CH---HHHHHHHHC-CC-EEEEecccccccc-------ccccchhh------HHHH
Confidence 1 1 1222333333211 11 122233221 12 2233332221000 00111222 1112
Q ss_pred HH---HHHHHHHHhCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCC
Q 007802 313 LA---GILSALKLVGG----------TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS 379 (589)
Q Consensus 313 lA---gll~Alr~~g~----------~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~ 379 (589)
+| +++.+.+..++ .+.+.+|+|+|+|.+|.++++.+.. .|. +++.+|++.--...
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHHHHHH
Confidence 22 55666665553 6789999999999999999987754 263 38899986321000
Q ss_pred cccCCch--------------hchhhhcccCC------CCCHHHHHhccCCcEEEeecCC-----CCCCCHHHHHHHHcC
Q 007802 380 RKESLQH--------------FKKPWAHEHAP------IKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASF 434 (589)
Q Consensus 380 r~~~l~~--------------~k~~fa~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~ 434 (589)
.. .+.. .+-.|++...+ ...|.+.++. .|++|.++.. +.+++++.++.|.
T Consensus 211 ~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 VE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp HH-HTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred HH-HcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 00 0100 00011111000 0127777764 9999998833 3468999999995
Q ss_pred CCCcEEEecCCC
Q 007802 435 NEKPVIFALSNP 446 (589)
Q Consensus 435 ~erPIIFaLSNP 446 (589)
+..+|+-+|-+
T Consensus 286 -~g~vivdva~~ 296 (384)
T 1l7d_A 286 -PGSVIIDLAVE 296 (384)
T ss_dssp -TTCEEEETTGG
T ss_pred -CCCEEEEEecC
Confidence 67789988864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.95 E-value=0.001 Score=71.11 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=71.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc--------------hhchhh
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ--------------HFKKPW 391 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~--------------~~k~~f 391 (589)
.+...||+|+|+|.+|.++|+.+... |. +++++|++.-..+...+ +. +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 36789999999999999999988643 63 68999987532111100 10 001124
Q ss_pred hcccCC------CCCHHHHHhccCCcEEEeecCC-----CCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCC
Q 007802 392 AHEHAP------IKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECT 453 (589)
Q Consensus 392 a~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~~E~t 453 (589)
++...+ ..+|.|+++. .|++|++... +.+||+++++.|. +..+|+-+|- |-...|++
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 1378999986 9999998543 4579999999996 7899999995 33445555
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.62 E-value=0.019 Score=61.87 Aligned_cols=178 Identities=19% Similarity=0.183 Sum_probs=127.2
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH-H-HHHHHcC---CC--cee----------ccCCCchHHHHH
Q 007802 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF-E-LLSKYSS---SH--LVF----------NDDIQGTASVVL 313 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af-~-iL~ryr~---~~--~~F----------nDDiQGTaaV~l 313 (589)
.+..|-..|...|++++.+.-||..-|-=+|++..-.. . +.+.|+. .. .++ .+--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 45567778899999999999999888888999874322 2 5567742 10 122 233456888888
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhc-hhhh
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK-KPWA 392 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k-~~fa 392 (589)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+-+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999998653 53 5567999999999764 343321 1121
Q ss_pred cccC-------CCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 393 HEHA-------PIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 393 ~~~~-------~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
.... ..-+-.+. -.++.|+||=+..+ +..|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEEL-LEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCccc-eeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 11123343 45789999988775 79999988876 5789998888 65
No 16
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.40 E-value=0.18 Score=54.69 Aligned_cols=183 Identities=15% Similarity=0.077 Sum_probs=126.1
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH--HHHHHH---cCCC-cee----------ccCCCchHHHHH
Q 007802 250 RATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKY---SSSH-LVF----------NDDIQGTASVVL 313 (589)
Q Consensus 250 R~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af--~iL~ry---r~~~-~~F----------nDDiQGTaaV~l 313 (589)
..+..|-..|...|+..+.+..||..=|--.|++..-.- -+.+.| +... ++| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 346677888999999999999999999999999754321 133344 3322 232 233344777777
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=|-+-|++|-|++.. .++..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88889999999999999999999999999999988653 63 5567789999988753 35443321111
Q ss_pred c--cCCCCCHHHH-------------HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 394 E--HAPIKSLLDA-------------VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 394 ~--~~~~~~L~e~-------------V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
+ ......+.+. +-.++.|||+=+..+ +..|++-++.+.+. .-.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 1 0011122221 234689999988775 69999999998642 2357877778 55
No 17
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.39 E-value=0.0039 Score=66.22 Aligned_cols=104 Identities=21% Similarity=0.187 Sum_probs=67.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCccc------CCc---hhchhhhccc--
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE------SLQ---HFKKPWAHEH-- 395 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~------~l~---~~k~~fa~~~-- 395 (589)
+...||+|+|+|.+|..+|+.+... |. +++++|++.-..+.-.+ .+. .....|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988653 63 58899987421100000 000 0011122110
Q ss_pred ----CCCCCHHHHHhccCCcEEEeecCC-----CCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 396 ----APIKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 396 ----~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 012368889976 9999997533 3579999999996 688999998654
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.21 E-value=0.03 Score=60.20 Aligned_cols=186 Identities=15% Similarity=0.143 Sum_probs=126.9
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH--HHHHHHcC---CC--cee----------ccCCCchHHHHH
Q 007802 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYSS---SH--LVF----------NDDIQGTASVVL 313 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af--~iL~ryr~---~~--~~F----------nDDiQGTaaV~l 313 (589)
.+..|-..|...|++++.+.-||..-|-=+|++..-.. -+.+.|+. .. .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 34566778899999999999999999999999875321 25566631 10 111 223344666666
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE-EEcccCcccCCcccCCchhc-hhh
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK-KPW 391 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~-~vD~~GLv~~~r~~~l~~~k-~~f 391 (589)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+ .|. +++ +.|++|-|++.. .|+..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~Ga-------kVVavsD~~G~i~dp~--Gld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LGM-------RVVAVATSMGGMYAPE--GLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEcCCCeEECCC--CCCHHHHHHH
Confidence 7788888899999999999999999999999998865 363 455 999999998764 243221 111
Q ss_pred hcccCCCC----CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 007802 392 AHEHAPIK----SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEEAYT 459 (589)
Q Consensus 392 a~~~~~~~----~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~~E~t~eda~~ 459 (589)
......+. +-.+ +-.++.|+|+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.++
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 0012 34578999998776 679999988877 5679999998 663 33 445544
No 19
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.09 E-value=0.022 Score=57.17 Aligned_cols=122 Identities=17% Similarity=0.195 Sum_probs=80.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch
Q 007802 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~ 386 (589)
.+-+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHH
Confidence 34455555555566677889999999999999999999998754 263 588888752 11 111
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHH
Q 007802 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEEA 457 (589)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~~E~t~eda 457 (589)
.+ .+--......+|.|.++. .|++|-.. ..+.++++.++.|. +..+++=+|. |. ++..+.+
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 10 110000012368888864 99999665 45799999999885 5678888884 43 3455444
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.90 E-value=0.017 Score=59.56 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=77.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcC-hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc
Q 007802 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAG-sAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~ 385 (589)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888999999999999999999999999 5799999888652 4 358888743
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007802 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 446 (589)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468899986 99999999999999999875 45577766654
No 21
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.73 E-value=0.026 Score=57.19 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa 392 (589)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 36788999888889999999999999777777766644 365 679988875 122 111222222
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEeecCCC
Q 007802 393 HE-------HAPIKSLLDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 393 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 420 (589)
.. ..+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888886 89999877654
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.63 E-value=0.029 Score=57.49 Aligned_cols=93 Identities=19% Similarity=0.265 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch
Q 007802 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (589)
Q Consensus 308 TaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~ 386 (589)
-.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~------------- 194 (285)
T 3l07_A 140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF------------- 194 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577888999999999999999999999876 899999988652 53 47777653
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++
T Consensus 195 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 -----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp -----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred -----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368899986 99999999999999998874 344555543
No 23
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.62 E-value=0.47 Score=51.52 Aligned_cols=190 Identities=18% Similarity=0.170 Sum_probs=128.9
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHH--HHHHHc---CCCc-ee----------ccCCCchHHHHHH
Q 007802 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE--LLSKYS---SSHL-VF----------NDDIQGTASVVLA 314 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~--iL~ryr---~~~~-~F----------nDDiQGTaaV~lA 314 (589)
.+..+...|-..||..+.+-.||..=|-=+|++..-... +.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 356677888888999998888999989999998743222 455654 2221 11 1122346666777
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchh----
Q 007802 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP---- 390 (589)
Q Consensus 315 gll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~---- 390 (589)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +-+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7788888889999999999999999999999988663 53 4455889999888754 34322211
Q ss_pred -----------hhcccCCCC--CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHH
Q 007802 391 -----------WAHEHAPIK--SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEE 456 (589)
Q Consensus 391 -----------fa~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~~E~t~ed 456 (589)
|+...+..+ +-.+ +-.++.||||=+.. ++..|++-++.+-+ ++-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 211001100 0011 33568999998877 67999999999843 25689999999 653 55 556
Q ss_pred Hhc
Q 007802 457 AYT 459 (589)
Q Consensus 457 a~~ 459 (589)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 24
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.57 E-value=0.11 Score=55.68 Aligned_cols=179 Identities=13% Similarity=0.173 Sum_probs=112.9
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH--HHHHHHc---CCC---cee----------ccCCCchHHHH
Q 007802 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYS---SSH---LVF----------NDDIQGTASVV 312 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af--~iL~ryr---~~~---~~F----------nDDiQGTaaV~ 312 (589)
.+..|-..|...|++++.+.-||..-|-=+|++..-.. -+.+.|+ ... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 34556778899999999999999999999999975321 2566664 211 222 22223466666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc-----CcccCCcccCCchh
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK-----GLIVSSRKESLQHF 387 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~-----GLv~~~r~~~l~~~ 387 (589)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++... |+..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~G--ld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNENG--IDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSSC--CCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCCC--CCHH
Confidence 66777888889999999999999999999999998865 363 334489999 99997642 4322
Q ss_pred c-hhhhcccCCCCC------H-HHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 388 K-KPWAHEHAPIKS------L-LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 388 k-~~fa~~~~~~~~------L-~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
. +.+......+.. + .+.+-.++.||||=++. ++..|++-.+.+ ...+|.-=+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 1 111111111100 0 01233457888886655 567888777766 4567777777 55
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.32 E-value=0.043 Score=56.22 Aligned_cols=96 Identities=17% Similarity=0.251 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch
Q 007802 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (589)
Q Consensus 308 TaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~ 386 (589)
-.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45678889999999999999999999999876 899999988652 53 47777753
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC-CCC
Q 007802 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NPT 447 (589)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt 447 (589)
..+|.+.++. +|++|...+.++.++.++|| +.-+|+=++ ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368899986 99999999999999998884 445666553 443
No 26
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.30 E-value=0.14 Score=55.41 Aligned_cols=188 Identities=16% Similarity=0.161 Sum_probs=126.0
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHH---HHHHHcC---C--Ccee----------ccCCCchHHHH
Q 007802 251 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYSS---S--HLVF----------NDDIQGTASVV 312 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~---iL~ryr~---~--~~~F----------nDDiQGTaaV~ 312 (589)
.+..|-..|...|++++.+.-||..-|-=+|++.. ... +.+.|+. . -.++ .+.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 34566778899999999999999999999999874 222 5566631 1 1222 23334466666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccC---Cchhch
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES---LQHFKK 389 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~---l~~~k~ 389 (589)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++...=+ |..++.
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l~~~~~ 287 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDLLRHVQ 287 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence 667788888899999999999999999999999988652 53 3344999999998764211 222222
Q ss_pred hhhc--c--cCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 007802 390 PWAH--E--HAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEEAYT 459 (589)
Q Consensus 390 ~fa~--~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~~E~t~eda~~ 459 (589)
.+-+ + ....-+-.| +-.++.|+||=++. ++..|++-++.+ .-.+|.--+| |++ +| +++.++
T Consensus 288 ~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~t-~e--A~~iL~ 353 (440)
T 3aog_A 288 EFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPTT-PA--ADDILL 353 (440)
T ss_dssp HTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred hcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCccccC-HH--HHHHHH
Confidence 2110 0 000112334 44678999998776 568888888777 5678888888 653 33 344443
No 27
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.25 E-value=0.035 Score=56.93 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=76.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc
Q 007802 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~ 385 (589)
+-.-+|-.|++-.++..+.++++.++|++|+|. .|.-+|.++.. .| ..+++++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLL-----AG-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHT-----TT-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHH-----CC-------CeEEEEeCC------------
Confidence 455678889999999999999999999999995 69999888754 24 357777642
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007802 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 446 (589)
..+|.+.++. +|++|+..+.++.+++++|| +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 0468899987 99999999999999998874 34466655543
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.22 E-value=0.043 Score=55.96 Aligned_cols=83 Identities=11% Similarity=0.196 Sum_probs=67.8
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc
Q 007802 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~ 385 (589)
+-.-+|-.|++..++..+ |++.++|++|+|. .|..+|.++... |. .+++++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 345678889999999998 9999999999984 899999988652 52 47777652
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHH
Q 007802 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVE 429 (589)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~ 429 (589)
..+|.+.++. +|++|...+.++.++++++|
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 213 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT 213 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc
Confidence 1468899987 99999999999999988763
No 29
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.15 E-value=0.083 Score=52.77 Aligned_cols=121 Identities=14% Similarity=0.191 Sum_probs=74.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~v 408 (589)
..||.|+|+|..|.++|..+... |.. ..+|+++|++ .+ .+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~---~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LD---KLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SH---HHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HH---HHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988653 653 2478888874 11 122222211 00112578899975
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcC--CCCcEEEecCCCCCCCCCCHHHHhccccC--cEEEeeCCCCCccee
Q 007802 409 KPTMLMGTSGVGKTFTKEVVEAMASF--NEKPVIFALSNPTSQSECTAEEAYTWSKG--QAIFASGSPFDPVEY 478 (589)
Q Consensus 409 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNPt~~~E~t~eda~~wT~G--raifAsGSPf~pv~~ 478 (589)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .++.-+|... +++-+ -|..|...
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 88877 44444 4568888888765 56668888888774 3444444432 33322 35555543
No 30
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.10 E-value=0.053 Score=55.56 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch
Q 007802 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (589)
Q Consensus 308 TaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~ 386 (589)
-.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~------------- 194 (286)
T 4a5o_A 140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF------------- 194 (286)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577788999999999999999999999875 899999988652 52 46776542
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEec-CCCC
Q 007802 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFAL-SNPT 447 (589)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL-SNPt 447 (589)
..+|.+.++. +|++|+..+.++.++.++|| +.-+|+=+ +||.
T Consensus 195 -----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 -----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp -----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred -----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899986 99999999999999998884 44466555 3554
No 31
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.81 E-value=0.06 Score=55.50 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=74.9
Q ss_pred CCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccC
Q 007802 305 IQGTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 383 (589)
Q Consensus 305 iQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~ 383 (589)
..|-.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++ .
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T-- 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T-- 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S--
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C--
Confidence 34445678888999999999999999999999876 899999988652 52 47888762 1
Q ss_pred CchhchhhhcccCCCCCHH--HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 384 LQHFKKPWAHEHAPIKSLL--DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 384 l~~~k~~fa~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
.+|. +.++. +|++|...+.++.++.++++ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1344 88886 99999999999999998874 445665553
No 32
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.69 E-value=0.3 Score=53.21 Aligned_cols=179 Identities=17% Similarity=0.184 Sum_probs=120.6
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH--HHHHHHcC---C-Ccee----------ccCCCchHHHHHHH
Q 007802 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYSS---S-HLVF----------NDDIQGTASVVLAG 315 (589)
Q Consensus 252 ~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af--~iL~ryr~---~-~~~F----------nDDiQGTaaV~lAg 315 (589)
+..+...|-..||..+.+..||..=|-=+|++..-.. -+.+.|+. . -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 4556677888899999988899988889999874321 14556542 1 0111 12223466666667
Q ss_pred HHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh--------
Q 007802 316 ILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-------- 387 (589)
Q Consensus 316 ll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~-------- 387 (589)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++.. .++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gid~edl~~l~~~ 305 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV------KVLTLSDSNGYVYEPN--GFTHENLEFLIDL 305 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC------EECEEEETTEEEECSS--CCCHHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--CCCHHHHHHHHHH
Confidence 778888889999999999999999999999988653 53 3333888888888653 24222
Q ss_pred c-------hhhhcccCC---CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 388 K-------KPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 388 k-------~~fa~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
+ ..|+...+. ..+ .+. -.++.||||=+.. ++..|++-++.+-+ |.-.+|.--+| |+
T Consensus 306 k~~~~g~v~~~~~~~~~a~~v~~-~~~-~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 306 KEEKKGRIKEYLNHSSTAKYFPN-EKP-WGVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HTTTTCCGGGGGGTCSSCEECSS-CCT-TSSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhcCCcHHHHHhhcCCcEEecC-cCe-eecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 122211000 100 122 2568999998875 67999999999854 45679999998 65
No 33
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.64 E-value=0.068 Score=55.48 Aligned_cols=113 Identities=19% Similarity=0.246 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHH---------hCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCc
Q 007802 311 VVLAGILSALKL---------VGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR 380 (589)
Q Consensus 311 V~lAgll~Alr~---------~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r 380 (589)
+|-.|.+-.++- .|.++++.++|++|+|. .|.-+|.++.. .| .+++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~-----~g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAN-----DG-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHT-----TS-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHH-----CC-------CEEEEEeCchHHHHhH
Confidence 344555666666 68899999999999995 59888888754 24 3589999876555555
Q ss_pred ccCCchhchhhhcccCC---C--CCHHHHHhccCCcEEEeecCCCCC-CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 381 KESLQHFKKPWAHEHAP---I--KSLLDAVKAIKPTMLMGTSGVGKT-FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 381 ~~~l~~~k~~fa~~~~~---~--~~L~e~V~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
...+... ++.... . .+|.+.++. +|++|+..+.++. ++.++|+ +.-+|+=++-|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 3333311 121100 1 469999997 9999999999887 8988874 334666666654
No 34
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.64 E-value=0.48 Score=49.77 Aligned_cols=173 Identities=18% Similarity=0.200 Sum_probs=109.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHH--HHHHHHcC---CCcee---ccCCCchHHHHHHHHHHHHHHhC
Q 007802 253 GQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYSS---SHLVF---NDDIQGTASVVLAGILSALKLVG 324 (589)
Q Consensus 253 g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af--~iL~ryr~---~~~~F---nDDiQGTaaV~lAgll~Alr~~g 324 (589)
..+-++++..|.+++.+..|+ -|-=+|++..-.. -+.++|+- +-..+ .|=-.-||-=+.-++-.+++..|
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 345567788888888887766 4778999764321 25566652 11111 11112355555667777888889
Q ss_pred C-CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc-CCCCCHH
Q 007802 325 G-TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-APIKSLL 402 (589)
Q Consensus 325 ~-~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~-~~~~~L~ 402 (589)
. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..|++.. ...-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999998754 363 57788874 111 2232211 1111344
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 007802 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEEAYT 459 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~~E~t~eda~~ 459 (589)
|+.+ ++.|+|+=+ +..+.++++-++.| +..+|.--+| |+...|+ .++++
T Consensus 226 ell~-~~~DIliP~-A~~~~I~~~~~~~l----k~~iVie~AN~p~t~~eA--~~~L~ 275 (355)
T 1c1d_A 226 DVLS-TPCDVFAPC-AMGGVITTEVARTL----DCSVVAGAANNVIADEAA--SDILH 275 (355)
T ss_dssp GGGG-CCCSEEEEC-SCSCCBCHHHHHHC----CCSEECCSCTTCBCSHHH--HHHHH
T ss_pred Hhhc-CccceecHh-HHHhhcCHHHHhhC----CCCEEEECCCCCCCCHHH--HHHHH
Confidence 4433 578999954 45679999999999 3568888888 6533343 34443
No 35
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.53 E-value=0.022 Score=50.66 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch
Q 007802 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~ 386 (589)
|-.+|+.+++-.+-+.. +.||+|+|+|..|..++..+.. .|. + ++++|++ .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555444333322 7899999999999888776543 242 4 8888874 111 111
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCC
Q 007802 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 420 (589)
..+.|.-+.....++.++++. .|++|=+.+.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 122221111234578888875 88888665543
No 36
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.51 E-value=0.26 Score=51.85 Aligned_cols=102 Identities=18% Similarity=0.327 Sum_probs=63.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V 405 (589)
++.+.+|+|+|+|..|..++..+... |+ ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57899999999999999998887643 64 579988874 111 1111111211111224678888
Q ss_pred hccCCcEEEeecCCCC-CCCHHHHHH--HH-cCCCCcEEEecCCCC
Q 007802 406 KAIKPTMLMGTSGVGK-TFTKEVVEA--MA-SFNEKPVIFALSNPT 447 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g-~Fteevv~~--Ma-~~~erPIIFaLSNPt 447 (589)
+ +.|++|-+++.+. .++++.++. |. +...+-+++-++.|.
T Consensus 226 ~--~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 A--RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp H--TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred c--CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 6 4899998766543 467788887 43 222334555666553
No 37
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.49 E-value=0.077 Score=52.74 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=57.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchh-------hhcc--------
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP-------WAHE-------- 394 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~-------fa~~-------- 394 (589)
+||.|+|+|..|.+||..+..+ |. +++++|++- ++ +...+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~~---~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----DA---LDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----HH---HHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----HH---HHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999988753 64 688888751 11 1111111 1000
Q ss_pred -------cCCCCCHHHHHhccCCcEEEeecCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007802 395 -------HAPIKSLLDAVKAIKPTMLMGTSGVGK-TFTKEVVEAMASFNEKPVIFALSNPTSQ 449 (589)
Q Consensus 395 -------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPt~~ 449 (589)
-....++.|+++. .|++|=+ .... ...+++++.+.++...-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0113578888875 8988833 3221 14566777777655444444 3454443
No 38
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.47 E-value=0.17 Score=55.28 Aligned_cols=123 Identities=15% Similarity=0.242 Sum_probs=87.3
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccC
Q 007802 304 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 383 (589)
Q Consensus 304 DiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~ 383 (589)
.+.|.......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3445555555662 35688899999999999999999999988653 63 5888887521 00
Q ss_pred CchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007802 384 LQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 459 (589)
Q Consensus 384 l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~ 459 (589)
+. .+...-...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|.-. .|+.-++..+
T Consensus 294 ~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 11111112479999985 99999998778899999999885 567888787754 6777777665
No 39
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.19 E-value=0.32 Score=52.29 Aligned_cols=178 Identities=19% Similarity=0.189 Sum_probs=116.3
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHH---HHHHHcC---C--CceeccC----------CCchHHHHH
Q 007802 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYSS---S--HLVFNDD----------IQGTASVVL 313 (589)
Q Consensus 252 ~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~---iL~ryr~---~--~~~FnDD----------iQGTaaV~l 313 (589)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.. +.+.|+. . ..++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4466778899999999999999999999999973 222 3455531 1 1222221 123555555
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccC---Cchhchh
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES---LQHFKKP 390 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~---l~~~k~~ 390 (589)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++|-|++..+=+ |..++..
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga------kVVavsD~~G~i~dp~GlD~~~l~~~k~~ 263 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA------KVIAVSDINGVAYRKEGLNVELIQKNKGL 263 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------EEEEEECSSCEEECTTCCCTHHHHHTTTS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEECCCcEEECCCCCCHHHHHHHHHh
Confidence 5677788889999999999999999999999987754 353 3344899999998764211 1122211
Q ss_pred --------hhccc--CCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 391 --------WAHEH--APIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 391 --------fa~~~--~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
|.... ..+.+-.| +-.++.|+|+=+.. ++..|++-++.+ .-.||.--+| |+
T Consensus 264 ~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 264 TGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp CHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 11000 11101123 34568899997664 668888777766 5678888888 65
No 40
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.06 E-value=0.05 Score=55.12 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=56.0
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh
Q 007802 314 AGILSALKLVG-GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (589)
Q Consensus 314 Agll~Alr~~g-~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa 392 (589)
.|++.+++..+ .++++.+++|+|||.+|..+|..|.. .|. ++|+++|+. .++ .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777654 364 579988874 111 111111121
Q ss_pred cccCCC---CCHHHHHhccCCcEEEeecCCC
Q 007802 393 HEHAPI---KSLLDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 393 ~~~~~~---~~L~e~V~~vkPtvLIG~S~~~ 420 (589)
...... .++.++++. .|++|-+.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566654 89999877755
No 41
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.00 E-value=0.11 Score=53.06 Aligned_cols=98 Identities=14% Similarity=0.274 Sum_probs=75.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc
Q 007802 307 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 385 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~ 385 (589)
+-.-+|-.|++-.++..+.+|++.++|++|+|. .|.-+|.++.. .|. -..+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445677788999999999999999999999996 58888877743 210 1457777532
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007802 386 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 386 ~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 446 (589)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 0468899986 99999999999999999885 34577777665
No 42
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.84 E-value=1.3 Score=47.51 Aligned_cols=178 Identities=17% Similarity=0.177 Sum_probs=118.9
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccH--HHHHHHHc---CC--Cceec----------cCCCchHHHHHH
Q 007802 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA--FELLSKYS---SS--HLVFN----------DDIQGTASVVLA 314 (589)
Q Consensus 252 ~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~A--f~iL~ryr---~~--~~~Fn----------DDiQGTaaV~lA 314 (589)
+.+|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ .. ..++- +--.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 445667888999999999989998898999987521 12445552 11 12222 222345555566
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhc-hhhhc
Q 007802 315 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK-KPWAH 393 (589)
Q Consensus 315 gll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k-~~fa~ 393 (589)
++-.+++..|.+|++.||+|.|.|..|...|++|.+ + .|. +=+-+.|++|-+++.. .|+... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e---~-~Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ---E-LGS------KVVAVSDSRGGIYNPE--GFDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH---T-TCC------EEEEEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH---h-cCC------EEEEEEeCCCeEECCC--CCCHHHHHHHHH
Confidence 777788889999999999999999999999988865 0 253 3344899999988764 233311 11211
Q ss_pred ccCCC--------CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 394 EHAPI--------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 394 ~~~~~--------~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
....+ -+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 12334 45678999997776 568898888776 5668888888 65
No 43
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.81 E-value=1.3 Score=48.08 Aligned_cols=178 Identities=18% Similarity=0.198 Sum_probs=117.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHH--HHHHHc---CC--Cceecc----------CCCchHHHHHHH
Q 007802 253 GQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE--LLSKYS---SS--HLVFND----------DIQGTASVVLAG 315 (589)
Q Consensus 253 g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~--iL~ryr---~~--~~~FnD----------DiQGTaaV~lAg 315 (589)
..+-..|-..||..+.+..||..-|-=+|++..-... +.+.|+ +. .-++-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 4567777788999998889999999999998762211 334443 21 122211 223355555667
Q ss_pred HHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCC-chh-------
Q 007802 316 ILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL-QHF------- 387 (589)
Q Consensus 316 ll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l-~~~------- 387 (589)
+-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888899999999999999999999999888653 53 3444789998888753 34 221
Q ss_pred -c-------hhhhcc--cCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 388 -K-------KPWAHE--HAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 388 -k-------~~fa~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
+ ..|+.. .+.+. -.+ +-.++.|+|+=+.. ++..|++-.+.+.+ |...+|.-=+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i~-~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFFP-GEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEEE-TCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEeC-chh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 112110 00000 001 22568999997775 67999999999864 34578888888 65
No 44
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.80 E-value=0.11 Score=54.72 Aligned_cols=159 Identities=14% Similarity=0.139 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHhcCCceeeEeecCCCccHHHHHHHHcCCC-ceeccC------C---CchHHHHHHHHHHHHHHh-CC
Q 007802 257 AELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSH-LVFNDD------I---QGTASVVLAGILSALKLV-GG 325 (589)
Q Consensus 257 ~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~iL~ryr~~~-~~FnDD------i---QGTaaV~lAgll~Alr~~-g~ 325 (589)
++++..|.+.+.+..|+ .|-=+|++..-. .+...-+++ ++---- + .-||.=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677777788887775 467788875432 333333333 211111 1 234444444555666654 76
Q ss_pred -CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 326 -TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 326 -~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
+|++.+|+|.|+|..|..+|+.+.+ .|. ++++.|++ . +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~-----~Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNT-----EGA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHH-----CCC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 8999999999999999999998865 363 47788853 1 11333332221 111123332
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
. ..+.|++|=++ ..+.++++.++.| ...+|.--+| |+
T Consensus 227 l-~~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred h-ccCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 2 25789999554 5669999988888 3567776776 54
No 45
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.70 E-value=0.11 Score=51.82 Aligned_cols=145 Identities=17% Similarity=0.344 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhcC--------CceeeEeecCCCccHHHHHH--HHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCCC
Q 007802 260 LQEFMTAVKQNYG--------EKVLIQFEDFANHNAFELLS--KYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLAD 329 (589)
Q Consensus 260 idefv~av~~~fG--------p~~lIq~EDf~~~~Af~iL~--ryr~~~~~FnDDiQGTaaV~lAgll~Alr~~g~~l~d 329 (589)
+++|++.++..|. ...++.+=|- ++.|..+=. ....+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 4666666664442 2234555555 666655410 00011 3344443 3677887654 5788
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
+++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999998887765 364 679999885 222222321 1110 123467888875
Q ss_pred CcEEEeecCCC-----CCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 410 PTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 410 PtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
+|++|-++..+ ..+.++.++ +..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEeeC
Confidence 89999765432 123444332 4556666543
No 46
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.59 E-value=0.13 Score=55.87 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCC
Q 007802 425 KEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSP 472 (589)
Q Consensus 425 eevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSP 472 (589)
.++++.|.++|..-+++=.|||. +-+|- -+.++++=|+|=.+-||
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCGG
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeEEECCCH
Confidence 68999999999999999999998 33332 23344544544333333
No 47
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.35 E-value=0.18 Score=50.50 Aligned_cols=110 Identities=18% Similarity=0.192 Sum_probs=72.0
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCC
Q 007802 320 LKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK 399 (589)
Q Consensus 320 lr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~ 399 (589)
++..+..|.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.- .+ +...+..-++ .....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~-~~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLV-PFHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCE-EEEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCe-EEchh
Confidence 3456789999999999999999999998754 253 588888751 11 1111100001 00124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHH
Q 007802 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEA 457 (589)
Q Consensus 400 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda 457 (589)
+|.|.++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888874 999997655 4799999888774 567888888632 33445444
No 48
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.34 E-value=0.17 Score=55.33 Aligned_cols=100 Identities=15% Similarity=0.262 Sum_probs=73.4
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCC
Q 007802 320 LKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK 399 (589)
Q Consensus 320 lr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~ 399 (589)
.+.+|..|.+.+++|+|.|..|.++|+.+.. .|+ +++.+|++.. + .+... ...-...
T Consensus 268 ~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~--~~~a~-----~~G~~~~ 324 (494)
T 3d64_A 268 KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----C--ALQAA-----MEGYRVV 324 (494)
T ss_dssp HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----H--HHHHH-----TTTCEEC
T ss_pred hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----h--HHHHH-----HcCCEeC
Confidence 3578999999999999999999999998753 253 5888887521 0 00000 1111124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 400 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+|.|+++. .|++|......++++++.++.|. +.-||.=.|...
T Consensus 325 ~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 325 TMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp CHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred CHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 79999986 99999997778899999999995 567888787754
No 49
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.00 E-value=0.3 Score=50.11 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=70.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch-------hhhcc-------
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-------PWAHE------- 394 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~-------~fa~~------- 394 (589)
-+||.|+|+|..|.+||..+..+ |. +++++|.+- + .+...+. .++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999988763 64 588888751 1 1111110 00000
Q ss_pred --------cCCCCCHHHHHhccCCcEEEeecCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcE
Q 007802 395 --------HAPIKSLLDAVKAIKPTMLMGTSGVGK-TFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQA 465 (589)
Q Consensus 395 --------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~Gra 465 (589)
-....++.|+++. .|++| .+.... .+.+++++.+.++...-.|++ ||=++ ..+.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0112589999986 78877 333322 256677888887765444554 44222 44555555443222
Q ss_pred EEeeCCCCCcce
Q 007802 466 IFASGSPFDPVE 477 (589)
Q Consensus 466 ifAsGSPf~pv~ 477 (589)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 233445777763
No 50
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.97 E-value=0.15 Score=51.81 Aligned_cols=49 Identities=20% Similarity=0.309 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.|++.+++..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999888888877754 364 679988874
No 51
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.82 E-value=0.17 Score=52.05 Aligned_cols=50 Identities=32% Similarity=0.395 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-.|++.+++-.|.++++.++||+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 364 689999885
No 52
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.77 E-value=0.17 Score=52.07 Aligned_cols=90 Identities=27% Similarity=0.346 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
.|++.+++-.+.++++.++||+|||.+|.+|+..|.. .|. ++|+++++. ..+.+......+.|..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999888777776654 365 689988874 2211111111112211
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEeecCCC
Q 007802 394 E------HAPIKSL---LDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 394 ~------~~~~~~L---~e~V~~vkPtvLIG~S~~~ 420 (589)
. ..+..++ .+.++. .|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566665 89999776654
No 53
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.75 E-value=0.21 Score=51.40 Aligned_cols=106 Identities=18% Similarity=0.286 Sum_probs=68.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC---CCHHHHHh
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLDAVK 406 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~---~~L~e~V~ 406 (589)
.||.|+|||+.|.++|.++... |+ -+++++|.+-=..+.-..++.+.. .+......+ .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999988763 54 139999986211110000111111 111111122 57888888
Q ss_pred ccCCcEEEeecCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007802 407 AIKPTMLMGTSGVG---KT----------------FTKEVVEAMASFNEKPVIFALSNPTSQ 449 (589)
Q Consensus 407 ~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPt~~ 449 (589)
. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||...
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC 137 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH
Confidence 6 89988665444 32 147889999999988888888999843
No 54
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.75 E-value=0.29 Score=50.67 Aligned_cols=96 Identities=21% Similarity=0.281 Sum_probs=63.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc----CCCCCHH
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH----APIKSLL 402 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~----~~~~~L~ 402 (589)
++..+++|+|||.+|.+++..+.. .| | +++++|++ ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 677999999999999999887754 26 2 68888874 111 222222232210 1113566
Q ss_pred HHHhccCCcEEEeecCCCCC-----CCHHHHHHHHcCCCCcEEEecCCC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT-----FTKEVVEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~-----Fteevv~~Ma~~~erPIIFaLSNP 446 (589)
+.++ +.|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999998877653 5888888885 45577777754
No 55
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.73 E-value=0.16 Score=51.28 Aligned_cols=50 Identities=22% Similarity=0.298 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-.|++.+++..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999877777766643 364 679988874
No 56
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.70 E-value=0.36 Score=49.21 Aligned_cols=101 Identities=23% Similarity=0.291 Sum_probs=65.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCC---CCCHHHHHh
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVK 406 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~---~~~L~e~V~ 406 (589)
||+|+|| |..|..++.+|+. .|+ ...++++|.+- ..+...+|.+...+ .+ -.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~~a~dL~~~~~~-~~-l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPGVAADLSHIETR-AT-VKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHHHHHHHTTSSSS-CE-EEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHHHHHHHhccCcC-ce-EEEecCCCCHHHHhC
Confidence 7999998 9999998877643 354 36799999875 11100012221100 00 001 136888998
Q ss_pred ccCCcEEEeecCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 407 AIKPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
. .|++|=+.+.+. ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 898885554442 24567888888899998888899998
No 57
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.57 E-value=0.11 Score=52.52 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 392 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa 392 (589)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++|++++++ .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 35677888888999999999999999888888776654 364 578888875 222222221 111
Q ss_pred cccCCCCCHHHHHhccCCcEEEeecCCC
Q 007802 393 HEHAPIKSLLDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 393 ~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 420 (589)
. ....++.++++. +|++|-++..+
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112345565654 89999766543
No 58
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.49 E-value=0.17 Score=50.86 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=59.7
Q ss_pred HHHHHHHHHH-hcCCceeeEeecCCCccHHHHHHHHcC------CC-ceeccC--CCchHHHHHHHHHHH-HHHhCCCCC
Q 007802 260 LQEFMTAVKQ-NYGEKVLIQFEDFANHNAFELLSKYSS------SH-LVFNDD--IQGTASVVLAGILSA-LKLVGGTLA 328 (589)
Q Consensus 260 idefv~av~~-~fGp~~lIq~EDf~~~~Af~iL~ryr~------~~-~~FnDD--iQGTaaV~lAgll~A-lr~~g~~l~ 328 (589)
+.++++.++. .|+. ++.--=-...++++||+... -+ ++.++| ..|.-.= -.|++.+ ++..|.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 4666666653 4433 33322223345555554321 11 123333 3453222 3588888 888888999
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 9999999999877777776654 364 679988874
No 59
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.45 E-value=0.31 Score=47.32 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=62.1
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc--cCCcccCCc-hhchhhhccc--CC
Q 007802 323 VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI--VSSRKESLQ-HFKKPWAHEH--AP 397 (589)
Q Consensus 323 ~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv--~~~r~~~l~-~~k~~fa~~~--~~ 397 (589)
...++...||.|+|+|..|.++|..|... | .+++++|++-=- .+.....+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999988753 5 368888875211 000000000 0012232221 12
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHH-HcCCCCcEEEecCCCC
Q 007802 398 IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAM-ASFNEKPVIFALSNPT 447 (589)
Q Consensus 398 ~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~M-a~~~erPIIFaLSNPt 447 (589)
..++.|+++. +|++| ++..+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999986 88887 444333 345666666 4333677999999974
No 60
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.32 E-value=0.14 Score=51.55 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=62.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch---hchhhhcccCC--CCCHHHH
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH---FKKPWAHEHAP--IKSLLDA 404 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~---~k~~fa~~~~~--~~~L~e~ 404 (589)
.||.|+|||+.|..+|..|... |+ ...++++|++- ++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 25799999851 11111110 00011100001 1355 66
Q ss_pred HhccCCcEEEeecCC-------CCCC-----------CHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 405 VKAIKPTMLMGTSGV-------GKTF-----------TKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 405 V~~vkPtvLIG~S~~-------~g~F-----------teevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
++. .|++|=+... +|.. -+++++.|.+++...+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 664 8888754443 2211 1688999988888888888999984
No 61
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.19 E-value=0.23 Score=49.96 Aligned_cols=49 Identities=33% Similarity=0.369 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.|++.+++-.|.++++.|+|++|||-|+.+|+-.|.+ .|. ++|+++++.
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt 158 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS 158 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC
Confidence 4678889889999999999999999999988876654 365 689998873
No 62
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.16 E-value=0.54 Score=51.64 Aligned_cols=179 Identities=21% Similarity=0.265 Sum_probs=117.7
Q ss_pred CChhhHHHHHHHHHHHHHH--hcCCceeeEeecCCCccHH--HHHHHHcC---CC------ceeccCC---------Cch
Q 007802 251 ATGQEYAELLQEFMTAVKQ--NYGEKVLIQFEDFANHNAF--ELLSKYSS---SH------LVFNDDI---------QGT 308 (589)
Q Consensus 251 ~~g~~y~~fidefv~av~~--~fGp~~lIq~EDf~~~~Af--~iL~ryr~---~~------~~FnDDi---------QGT 308 (589)
.+..|-..|...||..+.+ -.||..-|-=+|++..-.. -+.+.|+. .. |+-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4567788899999999986 7789988999999875322 26777752 11 1111111 234
Q ss_pred HHHHHHHHHH------HHHHhCC--CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCc
Q 007802 309 ASVVLAGILS------ALKLVGG--TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR 380 (589)
Q Consensus 309 aaV~lAgll~------Alr~~g~--~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r 380 (589)
|-=+.-++-+ +++..|. +|++.||+|-|.|..|...|+.|.+ .|. +-+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e-----~Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHR-----FGA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEcCCceEECCC
Confidence 4444444433 3456675 5899999999999999999998865 263 5566899999999764
Q ss_pred ccCCchhch-hhhcccCCC------CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007802 381 KESLQHFKK-PWAHEHAPI------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 447 (589)
Q Consensus 381 ~~~l~~~k~-~fa~~~~~~------~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 447 (589)
.++..+. .+......+ ..+.+.+-.++.||||=+..+ +..|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3433221 111111100 001112456789999988875 79999988876 5789999999 54
No 63
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.06 E-value=0.21 Score=50.52 Aligned_cols=100 Identities=13% Similarity=0.289 Sum_probs=64.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccC----CchhchhhhcccCCC---CCHH
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES----LQHFKKPWAHEHAPI---KSLL 402 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~----l~~~k~~fa~~~~~~---~~L~ 402 (589)
.||.|+|||+.|.++|..+... |+ .+++++|.+- ++-+. +... ..+......+ .++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999988764 64 2599999862 21110 1110 1111111111 456
Q ss_pred HHHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
++++. .|++|=+.+.+.. ..+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 67765 8888865544421 24678888888898999999999974
No 64
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=91.93 E-value=1.2 Score=46.99 Aligned_cols=188 Identities=13% Similarity=0.092 Sum_probs=111.1
Q ss_pred CCceeccCC---CchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 297 SHLVFNDDI---QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 297 ~~~~FnDDi---QGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+.+.|.-- +.+|=-+++.+|+..|-.|..|++.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 455555432 2344458999999999999999999999999999999999988642 64 57878764
Q ss_pred CcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec---C-----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 374 GLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS---G-----VGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 374 GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
.- . . . ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..++.=.|+
T Consensus 149 ~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 0 0 01123589999986 89887542 1 34688999999885 5668776775
Q ss_pred CCCCCCCCHHHHhccccCcEEEeeCCCC--CcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHh
Q 007802 446 PTSQSECTAEEAYTWSKGQAIFASGSPF--DPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAA 523 (589)
Q Consensus 446 Pt~~~E~t~eda~~wT~GraifAsGSPf--~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~ 523 (589)
-.---|-.-.+|++ +|+..-|.=-=| +|. .+.. .. + +|.++-|=++--... --..|...+++.+..
T Consensus 209 G~vvd~~aL~~aL~--~g~i~~A~LDV~~~EP~-~~~~-l~--~-~nvi~TPHiag~t~e-----~~~~~~~~~~~nl~~ 276 (380)
T 2o4c_A 209 GAVVDNQALRRLLE--GGADLEVALDVWEGEPQ-ADPE-LA--A-RCLIATPHIAGYSLE-----GKLRGTAQIYQAYCA 276 (380)
T ss_dssp GGGBCHHHHHHHHH--TTCCEEEEESCCTTTTS-CCHH-HH--T-TCSEECSSCTTCCHH-----HHHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHH--hCCCceEEeeeeccCCC-Cchh-hc--c-CCEEEccccCcCCHH-----HHHHHHHHHHHHHHH
Confidence 22112222223333 555433311111 110 1111 11 1 478888877631111 123455566666666
Q ss_pred ccCcc
Q 007802 524 QVTQE 528 (589)
Q Consensus 524 ~v~~~ 528 (589)
....+
T Consensus 277 ~l~g~ 281 (380)
T 2o4c_A 277 WRGIA 281 (380)
T ss_dssp HHTCC
T ss_pred HHcCC
Confidence 65533
No 65
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.62 E-value=1.7 Score=46.49 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=80.8
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCceeeEeecCCCccHHH---HHHHHc---CCC-c---eeccC----------CCchHHH
Q 007802 252 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYS---SSH-L---VFNDD----------IQGTASV 311 (589)
Q Consensus 252 ~g~~y~~fidefv~av~~~fGp~~lIq~EDf~~~~Af~---iL~ryr---~~~-~---~FnDD----------iQGTaaV 311 (589)
+.+|-..|...|++++.+.-||..-|-=+|++.. ... +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456678899999999998899988999999874 322 335552 221 1 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCccc
Q 007802 312 VLAGILSALKLVGGT-LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIV 377 (589)
Q Consensus 312 ~lAgll~Alr~~g~~-l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~ 377 (589)
+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +-+.+-|+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC------EEEEEeCCCcccc
Confidence 666778888889999 9999999999999999999988541 264 3333448877544
No 66
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.32 E-value=0.29 Score=52.88 Aligned_cols=106 Identities=12% Similarity=0.251 Sum_probs=67.1
Q ss_pred CCCceEEEeCcChH--HHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc---CCCCCH
Q 007802 327 LADQTFLFLGAGEA--GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH---APIKSL 401 (589)
Q Consensus 327 l~d~riv~~GAGsA--g~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~---~~~~~L 401 (589)
.+..||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+.. ....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888642 222 2 3899999861 11000000000111100 112589
Q ss_pred HHHHhccCCcEEEeecCCC---------------CCC---------------------CHHHHHHHHcCCCCcEEEecCC
Q 007802 402 LDAVKAIKPTMLMGTSGVG---------------KTF---------------------TKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~---------------g~F---------------------teevv~~Ma~~~erPIIFaLSN 445 (589)
.||++. +|.+|=.-.++ |.. -.++++.|.++|..-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999987 89887444322 221 3578888999999999999999
Q ss_pred CC
Q 007802 446 PT 447 (589)
Q Consensus 446 Pt 447 (589)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 67
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.16 E-value=1.8 Score=44.72 Aligned_cols=199 Identities=18% Similarity=0.206 Sum_probs=106.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC-cccCCcccCCchhchhhhcc-------------
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG-LIVSSRKESLQHFKKPWAHE------------- 394 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G-Lv~~~r~~~l~~~k~~fa~~------------- 394 (589)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+= -+.+.+ +.+......+.+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~~~~l~~~~-~~i~~~l~~~~~~g~~~~~~~~~~~l 72 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEPRQITGAL-ENIRKEMKSLQQSGSLKGSLSAEEQL 72 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCHHHHHHHH-HHHHHHHHHHHHTTCCCSSSCHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECCHHHHHHHH-HHHHHHHHHHHHcCCCCCccCHHHHH
Confidence 46899999999999999988763 75 578888641 000000 0000000000000
Q ss_pred --cCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc--cCcEEEeeC
Q 007802 395 --HAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWS--KGQAIFASG 470 (589)
Q Consensus 395 --~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT--~GraifAsG 470 (589)
-....+|.|+++. .|.+|=+---.=-..+++.+.+.++++.-.||+=+.-+ ..+.+..+.+ ..|+|..
T Consensus 73 ~~i~~~~~l~~a~~~--ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs----l~is~ia~~~~~p~r~ig~-- 144 (319)
T 3ado_A 73 SLISSCTNLAEAVEG--VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC----LLPSKLFTGLAHVKQCIVA-- 144 (319)
T ss_dssp HTEEEECCHHHHTTT--EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS----CCHHHHHTTCTTGGGEEEE--
T ss_pred hhcccccchHhHhcc--CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh----ccchhhhhhccCCCcEEEe--
Confidence 0112478888875 66666433222235788888898888888888643322 3444443333 2355544
Q ss_pred CCCCccee-CCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHhccCcccCCCCCccCCCCCchhhHHHH
Q 007802 471 SPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHI 549 (589)
Q Consensus 471 SPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ireVs~~V 549 (589)
-||.|+.+ .=..+.|+. . |+.=.++.+.+++..+-. ..+.-.-+.--=|.-++
T Consensus 145 HffNP~~~m~LVEiv~g~--------------------~-Ts~~~~~~~~~~~~~~gk-----~pv~v~kd~pGFi~NRl 198 (319)
T 3ado_A 145 HPVNPPYYIPLVELVPHP--------------------E-TSPATVDRTHALMRKIGQ-----SPVRVLKEIDGFVLNRL 198 (319)
T ss_dssp EECSSTTTCCEEEEEECT--------------------T-CCHHHHHHHHHHHHHTTC-----EEEECSSCCTTTTHHHH
T ss_pred cCCCCccccchHHhcCCC--------------------C-CcHHHHHHHHHHHHHhCC-----ccCCcCCCCCCEeHHHH
Confidence 47777754 333333332 2 333345667777665431 11111111112355666
Q ss_pred HHHHHHHH---HHcCCCCCCCCchhHHHHHHh
Q 007802 550 AAKVAAKA---YDLGLASRLPRPKDLVSYAES 578 (589)
Q Consensus 550 A~aVa~~A---~~~GvA~~~~~p~dl~~~i~~ 578 (589)
..+....| +++|+|+ ++|+...++.
T Consensus 199 ~~~~~~EA~~lv~eGvas----~edID~~~~~ 226 (319)
T 3ado_A 199 QYAIISEAWRLVEEGIVS----PSDLDLVMSD 226 (319)
T ss_dssp HHHHHHHHHHHHHTTSSC----HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCC----HHHHHHHHHh
Confidence 66666655 5789985 4555555543
No 68
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.13 E-value=2.4 Score=43.21 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=80.7
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhcc
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQT 356 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~ 356 (589)
..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 3566666433 23344578888888774 35789999999999999999999988642
Q ss_pred CCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHH
Q 007802 357 KAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMA 432 (589)
Q Consensus 357 G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma 432 (589)
|+ +++.+|+.. . .. ..........+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~------~~--~~~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I------RE--KAEKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C------HH--HHHHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c------hh--HHHhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 588888641 1 00 000111111379999986 898885432 34678899999885
Q ss_pred cCCCCcEEEecCC
Q 007802 433 SFNEKPVIFALSN 445 (589)
Q Consensus 433 ~~~erPIIFaLSN 445 (589)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887777
No 69
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.80 E-value=1.5 Score=46.44 Aligned_cols=120 Identities=12% Similarity=0.132 Sum_probs=86.0
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3455555432 3445568999999999999999999999999999999999988643 65 5777876
Q ss_pred cCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC--------CCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 373 KGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG--------VGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 373 ~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~--------~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
.. .. .. ......+|.|+++. .|+++=.-- ..+.|+++.++.|. +..|+.=.|
T Consensus 151 ~~------~~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR------AA-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH------HH-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch------HH-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 00 00 11223689999986 898874421 35689999999995 677888777
Q ss_pred CCC
Q 007802 445 NPT 447 (589)
Q Consensus 445 NPt 447 (589)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 633
No 70
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.70 E-value=0.4 Score=47.43 Aligned_cols=49 Identities=20% Similarity=0.256 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-.|++.+++-.|.++++.+++|+|||.+|..+|..+.. .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56788888888889999999999999888887777654 25 368888875
No 71
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.67 E-value=1.8 Score=47.37 Aligned_cols=108 Identities=14% Similarity=0.197 Sum_probs=75.8
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-cCCCC
Q 007802 321 KLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIK 399 (589)
Q Consensus 321 r~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~ 399 (589)
|.++..+.+.+|+|+|+|..|.++|+.+.. .|. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 456678999999999999999999988754 262 588888641 11111211 11124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007802 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 459 (589)
Q Consensus 400 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~ 459 (589)
++.|+++. .|++|-+.+..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 89999998888899999999985 566777777755 3666655443
No 72
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.64 E-value=0.23 Score=48.97 Aligned_cols=37 Identities=30% Similarity=0.369 Sum_probs=32.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 56788999999999999999988764 76 789999987
No 73
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.52 E-value=0.84 Score=47.22 Aligned_cols=97 Identities=23% Similarity=0.337 Sum_probs=60.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc----cCCCCCH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE----HAPIKSL 401 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~----~~~~~~L 401 (589)
.++..+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3788999999999999999987754 362 588888741 11 11111111110 0112357
Q ss_pred HHHHhccCCcEEEeecCCCC-----CCCHHHHHHHHcCCCCcEEEecCCC
Q 007802 402 LDAVKAIKPTMLMGTSGVGK-----TFTKEVVEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g-----~Fteevv~~Ma~~~erPIIFaLSNP 446 (589)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788875 899999877553 46899999885 34566666643
No 74
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.32 E-value=0.68 Score=48.13 Aligned_cols=38 Identities=24% Similarity=0.469 Sum_probs=33.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|++.||+++|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 457889999999999999999999875 76 789999986
No 75
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.31 E-value=0.32 Score=48.23 Aligned_cols=49 Identities=24% Similarity=0.347 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 313 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 313 lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-.|++.+++-.|.++++.+++|+|||.+|.++|..|.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888888889999999999999888888877754 24 468888875
No 76
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.13 E-value=0.09 Score=53.24 Aligned_cols=103 Identities=19% Similarity=0.300 Sum_probs=60.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC--CCHHHHHhcc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~--~~L~e~V~~v 408 (589)
||.|+|||+.|.++|..+.. .|+ ...++++|.+---.++...++.+.. +|..+ ... .+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~-~~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGG-HSELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEEC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECC-HHHhCC-
Confidence 89999999999999987754 254 1479999986210000000011111 11111 001 23 355664
Q ss_pred CCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 409 KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 409 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
.|++|=+.+.+.. .-+++++.|++++..-+|+-.|||..
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD 120 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH
Confidence 8888855544321 12788899999888888888999984
No 77
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.08 E-value=1.3 Score=43.87 Aligned_cols=83 Identities=18% Similarity=0.173 Sum_probs=55.5
Q ss_pred eEeecCCCccHHHHHHHHcC------CCceeccCCCchHHHHHHHHHHHHHHh-CCCCCCceEEEeC-cChHHHHHHHHH
Q 007802 277 IQFEDFANHNAFELLSKYSS------SHLVFNDDIQGTASVVLAGILSALKLV-GGTLADQTFLFLG-AGEAGTGIAELI 348 (589)
Q Consensus 277 Iq~EDf~~~~Af~iL~ryr~------~~~~FnDDiQGTaaV~lAgll~Alr~~-g~~l~d~riv~~G-AGsAg~GiA~ll 348 (589)
+.++-+.-..+.+++++-+. ...+| .|..|.- ..-.|++.+++-. +.++++.++||.| +|.+|.+++..+
T Consensus 62 ~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L 139 (287)
T 1lu9_A 62 IFVGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALL 139 (287)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHH
T ss_pred EEEccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHH
Confidence 33454444567777776552 22344 4445532 2456777788776 7889999999999 898888888877
Q ss_pred HHHHHhccCCCHHhhcCeEEEEccc
Q 007802 349 ALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 349 ~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+ .|. +++++|++
T Consensus 140 ~~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 140 AG-----EGA-------EVVLCGRK 152 (287)
T ss_dssp HH-----TTC-------EEEEEESS
T ss_pred HH-----CcC-------EEEEEECC
Confidence 64 363 38888875
No 78
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.88 E-value=0.22 Score=51.11 Aligned_cols=104 Identities=18% Similarity=0.336 Sum_probs=62.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC---CCHHHHHh
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLDAVK 406 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~---~~L~e~V~ 406 (589)
.||.|+|||+.|.++|.++.. .|+ -+++++|.+-=..++...++.+...++.. ...+ .++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGS-PAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCC-CCEEEECCCH-HHHC
Confidence 589999999999999987765 265 13999998621111000011111111111 1111 456 7777
Q ss_pred ccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 407 AIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 407 ~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
. .|++|=+.+.+ |. .-+++.+.+.+++..-+|+=-|||.+
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~ 135 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD 135 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH
Confidence 5 88888554333 21 24678888888898878766799984
No 79
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.78 E-value=0.26 Score=51.59 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=33.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57889999999999999999999875 76 789999997
No 80
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.66 E-value=4.4 Score=41.43 Aligned_cols=93 Identities=15% Similarity=0.224 Sum_probs=61.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (589)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. +....+ .....+|.|
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~-----~~~~~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKG-----FNM-------RILYYSRTR----KE-----EVEREL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH-----HHHHHH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEECCCc----ch-----hhHhhc---CcccCCHHH
Confidence 457899999999999999999998864 263 588888752 10 000011 011247889
Q ss_pred HHhccCCcEEEeec-C---CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 404 AVKAIKPTMLMGTS-G---VGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 404 ~V~~vkPtvLIG~S-~---~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
+++. .|+++=.- . ..+.+++++++.|. +..+|.-.|.
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8886 88887432 2 12577888888884 4567776664
No 81
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.62 E-value=2.9 Score=42.68 Aligned_cols=122 Identities=17% Similarity=0.190 Sum_probs=77.6
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcChHHHHHHHHHHHH
Q 007802 296 SSHLVFNDDIQ---GTASVVLAGILSALKLV---------------------GGTLADQTFLFLGAGEAGTGIAELIALE 351 (589)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~lAgll~Alr~~---------------------g~~l~d~riv~~GAGsAg~GiA~ll~~~ 351 (589)
..+.+.|---- .+|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 46777775432 33444788888887721 356889999999999999999998753
Q ss_pred HHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHH
Q 007802 352 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEV 427 (589)
Q Consensus 352 ~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteev 427 (589)
.|+ +++.+|+..- + ....+ .+ .....++.|+++. .|++|=.-. ..+.+++++
T Consensus 177 ----~G~-------~V~~~d~~~~----~---~~~~~-~~---g~~~~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQP----R---PEEAA-EF---QAEFVSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSSC----C---HHHHH-TT---TCEECCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCCc----c---hhHHH-hc---CceeCCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 264 5888886411 1 11111 11 0011278898886 888874421 235778888
Q ss_pred HHHHHcCCCCcEEEecCC
Q 007802 428 VEAMASFNEKPVIFALSN 445 (589)
Q Consensus 428 v~~Ma~~~erPIIFaLSN 445 (589)
++.|. +..++.-.|+
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88884 4567765555
No 82
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.61 E-value=0.3 Score=50.03 Aligned_cols=101 Identities=17% Similarity=0.261 Sum_probs=64.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCccc----CCchhchhhhcccCCC---CCHH
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI---KSLL 402 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~----~l~~~k~~fa~~~~~~---~~L~ 402 (589)
.||.|+|||+.|.++|.++... |+- +++++|.+ .++-+ .+.+.. .+......+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTN-VMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHH-HHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhh-hhcCCCcEEEECCCH-
Confidence 4899999999999999888652 651 39999975 22211 111111 111111111 466
Q ss_pred HHHhccCCcEEEeecCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007802 403 DAVKAIKPTMLMGTSGVG---KT----------------FTKEVVEAMASFNEKPVIFALSNPTSQ 449 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPt~~ 449 (589)
++++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||.+.
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 77776 89888654333 31 357788888899988887777999843
No 83
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.57 E-value=0.59 Score=41.79 Aligned_cols=37 Identities=22% Similarity=0.374 Sum_probs=28.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+++...+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 45567899999999999999988854 25 368889875
No 84
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.56 E-value=0.21 Score=51.13 Aligned_cols=111 Identities=11% Similarity=0.059 Sum_probs=66.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc--Ccc--cCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK--GLI--VSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~--GLv--~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ .-- .++...+|.+.-.+|..+-....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887654 244110112479999975 100 0000001211101222221122578999
Q ss_pred HhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 405 VKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
++. .|++|=+.+.+.. .++++++.+.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 8888866554431 3568899999996 787777789998
No 85
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.47 E-value=0.94 Score=45.04 Aligned_cols=94 Identities=12% Similarity=0.138 Sum_probs=56.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc--cCcccCCcccCCchhchhhh--------cccCCCC-
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWA--------HEHAPIK- 399 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~--~GLv~~~r~~~l~~~k~~fa--------~~~~~~~- 399 (589)
||.|+|+|..|..+|..|... | .+++++|+ +.-- +...++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI-------LKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH-------HHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH-------HHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988653 5 36888887 3110 111100000 0000112
Q ss_pred -CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 400 -SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 400 -~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
++.|+++. .|++| ++..+ -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67777764 78776 33323 36788888876633456788888865
No 86
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.30 E-value=0.58 Score=47.68 Aligned_cols=101 Identities=17% Similarity=0.237 Sum_probs=64.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-cCCCCCHHHHHhcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAI 408 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~~L~e~V~~v 408 (589)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.. +... -....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999988643 54 268999998631 1111111221 2111 0111466 66765
Q ss_pred CCcEEEeecCCC--CC-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 409 KPTMLMGTSGVG--KT-----------FTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 409 kPtvLIG~S~~~--g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
.|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89888555443 10 13678899999999999888999983
No 87
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.21 E-value=0.46 Score=51.78 Aligned_cols=124 Identities=12% Similarity=0.115 Sum_probs=73.7
Q ss_pred CceEEEeCcChHH--HHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh-c--ccCC---CCC
Q 007802 329 DQTFLFLGAGEAG--TGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-H--EHAP---IKS 400 (589)
Q Consensus 329 d~riv~~GAGsAg--~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa-~--~~~~---~~~ 400 (589)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+........+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 3589999999965 4446666431 122 136799999863 21111111111221 1 1111 157
Q ss_pred HHHHHhccCCcEEEeecCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 007802 401 LLDAVKAIKPTMLMGTSGV---------------GKTFT-------------------------KEVVEAMASFNEKPVI 440 (589)
Q Consensus 401 L~e~V~~vkPtvLIG~S~~---------------~g~Ft-------------------------eevv~~Ma~~~erPII 440 (589)
+.++++. .|++|=+.+. .|.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899986 8988855532 13333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhccccCcEEEeeC
Q 007802 441 FALSNPTSQSECTAEEAYTWSKGQAIFASG 470 (589)
Q Consensus 441 FaLSNPt~~~E~t~eda~~wT~GraifAsG 470 (589)
+-.|||.. +..+-+.++..-| +|.+|
T Consensus 149 i~~TNPvd---i~t~~~~k~p~~r-viG~c 174 (480)
T 1obb_A 149 LQAANPIF---EGTTLVTRTVPIK-AVGFC 174 (480)
T ss_dssp EECSSCHH---HHHHHHHHHSCSE-EEEEC
T ss_pred EEeCCcHH---HHHHHHHHCCCCc-EEecC
Confidence 99999982 2333444454444 45443
No 88
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.76 E-value=0.76 Score=45.54 Aligned_cols=84 Identities=21% Similarity=0.372 Sum_probs=55.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
.|++.+++..|.++++.+++|+|+|.+|..+|..+... |. +|+++|++ .++ .......|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998887653 52 68888875 111 111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCC
Q 007802 394 EHAPIKSLLDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 394 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 420 (589)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0011266777764 89999665543
No 89
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.66 E-value=0.95 Score=48.89 Aligned_cols=102 Identities=11% Similarity=0.147 Sum_probs=63.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (589)
.++..+|.|+|+|..|..+|..|.+ .|. +++++|+. .+ ......+.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHH
Confidence 3567789999999999999998865 264 57777764 11 11111111100 01113578888
Q ss_pred Hhcc-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 405 VKAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 405 V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
++.. +||++| ++..++...+++++.+...- +..||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 55555556888888887654 356888888865
No 90
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=88.63 E-value=0.27 Score=49.78 Aligned_cols=102 Identities=17% Similarity=0.266 Sum_probs=63.4
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc--cCcccCCcccCCchhchhhhcccCCC--CCHHHHH
Q 007802 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAV 405 (589)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~--~GLv~~~r~~~l~~~k~~fa~~~~~~--~~L~e~V 405 (589)
||+|.| +|..|..++..|+. .|+ ...+.|+|. +-=-.++-..+|.+... +.++ ... .+ .+++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~-~~v~~~~-~~a~ 68 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSN-TRVRQGG-YEDT 68 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCC-CEEEECC-GGGG
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCC-cEEEeCC-HHHh
Confidence 899999 99999998887754 254 256999997 31000000001221111 1111 000 22 5667
Q ss_pred hccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 406 KAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+. .|++|=+.+.+ |- .++++++.|.+++.+.+|+--|||.
T Consensus 69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 65 89988666554 32 4677889999999999999999997
No 91
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.62 E-value=0.5 Score=48.00 Aligned_cols=99 Identities=15% Similarity=0.320 Sum_probs=61.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch------hhhccc-CCCCCHHH
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK------PWAHEH-APIKSLLD 403 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~------~fa~~~-~~~~~L~e 403 (589)
||.|+|||+.|.++|..+... |. ...++++|.+- ++ +..... ++.... -...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999887653 54 14799999851 11 111111 111000 00123 34
Q ss_pred HHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007802 404 AVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTSQ 449 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~ 449 (589)
+++. .|++|=+-..+.. .-+++++.|.+++..-+|+-.|||...
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 5654 8888744443321 127889999988888788889999843
No 92
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=88.60 E-value=0.77 Score=47.69 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=67.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
++.+++.... +....++.|+|+|..|-.++..+... .+. ++++++|+. .++ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555553 34678999999999999988766543 233 678888874 111 2222223321
Q ss_pred c----cCCCCCHHHHHhccCCcEEEeecCCC---CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHH
Q 007802 394 E----HAPIKSLLDAVKAIKPTMLMGTSGVG---KTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTAE 455 (589)
Q Consensus 394 ~----~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~~E~t~e 455 (589)
. .....++.|+++. .|++|=+...+ ..|..+.+ .+.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 0 1123689999986 89998665543 13443322 23447777775 55 5777664
No 93
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.51 E-value=0.18 Score=51.45 Aligned_cols=105 Identities=16% Similarity=0.252 Sum_probs=62.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC-CCHHHHHhcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI-KSLLDAVKAI 408 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~-~~L~e~V~~v 408 (589)
.||.|+|||..|.++|-.+... |+ ...|+++|.+--..+....++.+. .++......+ .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999766442 54 257999998621111000012111 1111100000 123456665
Q ss_pred CCcEEEeecCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 409 KPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 409 kPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+. ...+++++.|.+++..-++|-.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 888885544442 12467888888888888888899998
No 94
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=88.20 E-value=2.2 Score=43.61 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=69.0
Q ss_pred HHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc---
Q 007802 317 LSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH--- 393 (589)
Q Consensus 317 l~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~--- 393 (589)
+++-....+ ...++.|+|+|..|-.+++.+... .++ ++|+++|+. +. ......+.+
T Consensus 111 laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a---~~la~~l~~~~g 169 (313)
T 3hdj_A 111 LAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------AS---PEILERIGRRCG 169 (313)
T ss_dssp HHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CC---HHHHHHHHHHHT
T ss_pred HHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HH---HHHHHHHHHhcC
Confidence 344444332 467999999999998888876543 233 789999987 21 122222221
Q ss_pred -ccCCCCCHHHHHhccCCcEEEeecCCC-CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHHHH
Q 007802 394 -EHAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTAEEA 457 (589)
Q Consensus 394 -~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~~E~t~eda 457 (589)
+.... ++.|+++. .|++|-+...+ ..|..+.+ .+..+|..++. |. +.|+.++-.
T Consensus 170 ~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 170 VPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp SCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred CeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 11123 89999987 99999665432 24554433 36678888876 44 588888754
No 95
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.14 E-value=1.8 Score=44.98 Aligned_cols=95 Identities=12% Similarity=0.199 Sum_probs=61.2
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-cCCCCCHHHHH
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAV 405 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~~L~e~V 405 (589)
++..||.|+|.|..|..+|..|... | .+++++|+. .++ + ..++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~~---~----~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VNA---V----QALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HHH---H----HHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HHH---H----HHHHHCCCEEeCCHHHHH
Confidence 4567999999999999999988653 5 357777764 111 1 122221 12235788888
Q ss_pred hcc-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCC
Q 007802 406 KAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNP 446 (589)
Q Consensus 406 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNP 446 (589)
+.. +||++| ++...+ -.+++++.+..+- +.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 864 568877 444344 6788888877643 56678777773
No 96
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.11 E-value=1.4 Score=44.53 Aligned_cols=113 Identities=15% Similarity=0.150 Sum_probs=63.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
++.+++.... +....+|.|+|+|..|..++..+... .|+ ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3445553332 45677999999999999999887653 243 578888863 111 1111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCC-CCCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCH
Q 007802 394 EHAPIKSLLDAVKAIKPTMLMGTSGV-GKTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTA 454 (589)
Q Consensus 394 ~~~~~~~L~e~V~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~~E~t~ 454 (589)
......++.|+++. +|++|=+... ..+|.++ ...+.-+|+.+|+ |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01123689999986 8988844321 1233331 1234568887743 43 355543
No 97
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.00 E-value=0.33 Score=41.58 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=51.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHh
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVK 406 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~ 406 (589)
++..+|+|+|+|..|..+++.+.. .| .+++++|++. ++.+.+......+.. .+..+. +.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~--~d~~~~-~~l~ 64 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVI--ANATEE-NELL 64 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEE--CCTTCH-HHHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEE--eCCCCH-HHHH
Confidence 456789999999999999888754 25 2477888752 111112111101111 111222 2222
Q ss_pred c---cCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 407 A---IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 407 ~---vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
. -++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 65 ~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 65 SLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp TTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred hcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 2 2589998655432011223444444445556666666665
No 98
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.88 E-value=0.36 Score=49.65 Aligned_cols=106 Identities=17% Similarity=0.262 Sum_probs=64.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~v 408 (589)
..||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++...+|.+.. +|.++..-..+-.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877442 44 2689999984100000000122111 232210000133566776
Q ss_pred CCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 409 KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 409 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 8998866555432 1245777788889999999999998
No 99
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.76 E-value=4.4 Score=41.11 Aligned_cols=108 Identities=18% Similarity=0.215 Sum_probs=73.6
Q ss_pred hHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEE
Q 007802 308 TASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL 369 (589)
Q Consensus 308 TaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~ 369 (589)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 444577778877662 34679999999999999999999988642 64 5888
Q ss_pred EcccCcccCCcccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 370 VDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 370 vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
+|+.. .. . .+.+ .-...+|.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.|
T Consensus 171 ~d~~~----~~-----~----~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~a 232 (307)
T 1wwk_A 171 YDPYP----NE-----E----RAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTS 232 (307)
T ss_dssp ECSSC----CH-----H----HHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECS
T ss_pred ECCCC----Ch-----h----hHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECC
Confidence 88741 10 0 1111 1112379899885 898885421 24678899999885 566887777
Q ss_pred C
Q 007802 445 N 445 (589)
Q Consensus 445 N 445 (589)
.
T Consensus 233 r 233 (307)
T 1wwk_A 233 R 233 (307)
T ss_dssp C
T ss_pred C
Confidence 7
No 100
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.71 E-value=0.53 Score=48.10 Aligned_cols=38 Identities=21% Similarity=0.306 Sum_probs=34.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478999999999999999999999876 76 789999987
No 101
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.70 E-value=2.8 Score=40.21 Aligned_cols=92 Identities=10% Similarity=0.191 Sum_probs=61.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~v 408 (589)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988653 420 01368888874 111 0 00012467788875
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 409 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 409 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 78777 44433 467888888876666668888888775
No 102
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.62 E-value=0.76 Score=47.01 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=65.0
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchh-hhcccCCCCCHHHHHhc
Q 007802 330 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP-WAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~-fa~~~~~~~~L~e~V~~ 407 (589)
.||+|.| +|..|..++..|.. .|+ ...++++|.+.- .+...+|.+...+ -.+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887643 354 256999996421 0000001110000 00000001257788886
Q ss_pred cCCcEEEeecCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 408 IKPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 408 vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 898886655443 24677888998989888999999998
No 103
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=87.58 E-value=4.5 Score=42.06 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=111.0
Q ss_pred CCceeccCC---CchHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 007802 297 SHLVFNDDI---QGTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 352 (589)
Q Consensus 297 ~~~~FnDDi---QGTaaV~lAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~ 352 (589)
.+++.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 117 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~- 195 (345)
T 4g2n_A 117 GIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF- 195 (345)
T ss_dssp TCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT-
T ss_pred CEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC-
Confidence 455555432 23555678888887763 25678999999999999999999988542
Q ss_pred HhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHH
Q 007802 353 SKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVV 428 (589)
Q Consensus 353 ~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv 428 (589)
|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- ..+.|+++.+
T Consensus 196 ----G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~l 250 (345)
T 4g2n_A 196 ----GL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDRI 250 (345)
T ss_dssp ----TC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHHH
T ss_pred ----CC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHHH
Confidence 64 5888887531 100 01111112589999986 898884422 2378999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCC-CCcceeCCeeeCCCCccccccchhhhHHHHHhCCc
Q 007802 429 EAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSP-FDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAI 507 (589)
Q Consensus 429 ~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSP-f~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~ 507 (589)
+.|. +..|+.=.|+-..--|-.-.+|++ +|+.-. .|-. |++-- .....-=+..|+.+-|=+|-...
T Consensus 251 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~g-A~LDVf~~EP--~~~~pL~~~~nvilTPHia~~t~----- 317 (345)
T 4g2n_A 251 AKIP---EGAVVINISRGDLINDDALIEALR--SKHLFA-AGLDVFANEP--AIDPRYRSLDNIFLTPHIGSATH----- 317 (345)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEE-EEESCCTTTT--SCCTTGGGCTTEEECCSCTTCBH-----
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCceE-EEecCCCCCC--CCCchHHhCCCEEEcCccCcCCH-----
Confidence 9995 577888777633223333334443 566433 2321 11000 00011124568888887663211
Q ss_pred ccCHHHHHHHHHHHHhccC
Q 007802 508 RVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 508 ~Itd~m~~aAA~aLA~~v~ 526 (589)
.-.+.|...+++-|.....
T Consensus 318 e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 318 ETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 1224566666666666554
No 104
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=87.43 E-value=0.31 Score=52.53 Aligned_cols=127 Identities=14% Similarity=0.227 Sum_probs=75.2
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc---ccCC---CCCHH
Q 007802 330 QTFLFLGAGEA-GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH---EHAP---IKSLL 402 (589)
Q Consensus 330 ~riv~~GAGsA-g~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~---~~~~---~~~L~ 402 (589)
.||.|+|||+. +.+++..|+.. ..++. -..++|+|.+-- +++.+.+.+....+.. .... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 267999998620 0211111111122211 1111 15788
Q ss_pred HHHhccCCcEEEeecCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT----------------------------------FTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
++++. .|++|=..++++. .=+++++.|.++|..-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99987 8998866665421 13588999999999999999999982
Q ss_pred CCCCCHHHHhccccCcEEEeeC
Q 007802 449 QSECTAEEAYTWSKGQAIFASG 470 (589)
Q Consensus 449 ~~E~t~eda~~wT~GraifAsG 470 (589)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2333444555332455554
No 105
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.42 E-value=0.47 Score=53.33 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=33.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 57889999999999999999999875 76 789999997
No 106
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.40 E-value=0.7 Score=48.17 Aligned_cols=95 Identities=20% Similarity=0.294 Sum_probs=61.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc----cCCCCCH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE----HAPIKSL 401 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~----~~~~~~L 401 (589)
.+.+.+++|+|+|..|..+|+.+.. .|. +++.+|++. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999987754 263 588888741 11 11111112110 0012357
Q ss_pred HHHHhccCCcEEEeecCCC-----CCCCHHHHHHHHcCCCCcEEEecC
Q 007802 402 LDAVKAIKPTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
.+.++. .|++|.+...+ ..++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 788875 89999877555 356899998885 345666666
No 107
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.39 E-value=0.38 Score=46.65 Aligned_cols=99 Identities=13% Similarity=0.205 Sum_probs=60.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567899999999999999988653 53 2477787641 1111111111 00112456666
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
++ ++|++| ++..+.. .+++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~--~~Dvvi-~av~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NP--YAKLYI-VSLKDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CS--CCSEEE-ECCCHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hc--CCCEEE-EecCHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 65 478887 3433333 388888887654 567888888854
No 108
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.37 E-value=0.44 Score=48.80 Aligned_cols=105 Identities=14% Similarity=0.214 Sum_probs=63.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
.||.|+|||+.|..+|-+|+.. |+ -..|+|+|.+-=-.++...+|.+.. +|.++..-..+-.++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 5999999999999988876543 44 2689999984100000000122211 232210000133566765
Q ss_pred CcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 410 PTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 410 PtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8988855554421 2345777888899999999999998
No 109
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.21 E-value=0.58 Score=47.78 Aligned_cols=104 Identities=22% Similarity=0.311 Sum_probs=61.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccC-CCCCHHHHHhcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA-PIKSLLDAVKAI 408 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~-~~~~L~e~V~~v 408 (589)
.||.|+|||..|..+|-+|.. .|+ -..++++|.+-=..++...+|.+.. +|.++.. ...+ .++++.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a~~~- 74 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVFKEKAIGEAMDINHGL-PFMGQMSLYAGD-YSDVKD- 74 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC---CCHHHHHHTTSC-CCTTCEEEC--C-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChHHHHHHHHHHHHhH-HhcCCeEEEECC-HHHhCC-
Confidence 589999999999998887654 254 2579999986210010000111111 1211100 0123 456665
Q ss_pred CCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 007802 409 KPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 409 kPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+..- -+++++.|.+++..-+|+=.|||.
T Consensus 75 -aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 75 -CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp -CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 89888555544211 168899999999999999999997
No 110
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.17 E-value=3.5 Score=42.50 Aligned_cols=108 Identities=16% Similarity=0.249 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE
Q 007802 308 TASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW 368 (589)
Q Consensus 308 TaaV~lAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~ 368 (589)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 344467777776552 2467899999999999999999998754 264 588
Q ss_pred EEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 369 LVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 369 ~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
.+|+..- .... + . ...+|.|+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|
T Consensus 192 ~~dr~~~-------~~~g----~-~---~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~s 251 (333)
T 3ba1_A 192 YFSRSKK-------PNTN----Y-T---YYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIG 251 (333)
T ss_dssp EECSSCC-------TTCC----S-E---EESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECS
T ss_pred EECCCch-------hccC----c-e---ecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECC
Confidence 8887521 1110 1 0 12478898885 898874421 23688889999884 456777666
Q ss_pred CCC
Q 007802 445 NPT 447 (589)
Q Consensus 445 NPt 447 (589)
.-.
T Consensus 252 rG~ 254 (333)
T 3ba1_A 252 RGP 254 (333)
T ss_dssp CGG
T ss_pred CCc
Confidence 643
No 111
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.13 E-value=0.52 Score=47.66 Aligned_cols=98 Identities=17% Similarity=0.277 Sum_probs=55.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch-hhhc----ccCCCCCHHH
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAH----EHAPIKSLLD 403 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~-~fa~----~~~~~~~L~e 403 (589)
+.||.|+|+|+.|..+|..|..+ | .+++++|+..- +.+.+..... .|-. ...-..++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 57999999999999999988653 5 46888887411 0000111000 0000 0000134555
Q ss_pred HHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007802 404 AVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQ 449 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~ 449 (589)
++ ..|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~--~aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IK--KEDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CC--TTEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hc--CCCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 44 367655 33322 567777776654 55577888887653
No 112
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.02 E-value=0.55 Score=47.86 Aligned_cols=107 Identities=13% Similarity=0.254 Sum_probs=65.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC-CCHHHHHh
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI-KSLLDAVK 406 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~-~~L~e~V~ 406 (589)
+..||.|+|||..|..+|-.|... |+ -..++++|.+-=..++...+|.+. .+|....... .+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 54 257999997510001100112222 2332110000 13356777
Q ss_pred ccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 407 AIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
. .|++|=+.+.+.. .=+++++.|.+++..-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 5 8998855555432 1246778888899999999999998
No 113
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=86.95 E-value=0.92 Score=48.41 Aligned_cols=124 Identities=11% Similarity=0.160 Sum_probs=75.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHh-ccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccC---CCCCHHHHH
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSK-QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA---PIKSLLDAV 405 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~-~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~---~~~~L~e~V 405 (589)
.||.|+|||+. ++..++..+.. ..++. -..|+|+|.+- +|-+.........++... ...++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 66655444443 23442 36799999852 221101111111111111 125788999
Q ss_pred hccCCcEEEeecCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 007802 406 KAIKPTMLMGTSGVGK---------------TF-------------------TKEVVEAMASFNEKPVIFALSNPTSQSE 451 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g---------------~F-------------------teevv~~Ma~~~erPIIFaLSNPt~~~E 451 (589)
+. .|++|=..++++ .+ =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 87 999997777653 22 258999999999 99999999998 2
Q ss_pred CCHHHHhccccCcEEEeeC
Q 007802 452 CTAEEAYTWSKGQAIFASG 470 (589)
Q Consensus 452 ~t~eda~~wT~GraifAsG 470 (589)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2333444555332455544
No 114
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.91 E-value=0.55 Score=48.56 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=65.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~ 407 (589)
...||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.+...-..+..++++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 446999999999999999888753 55 257999998411011000012222 1232110001123456665
Q ss_pred cCCcEEEeecCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 007802 408 IKPTMLMGTSGVG---K-----TF------TKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 408 vkPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+ | +| -+++++.|.+++..-+|+-.|||.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 78877554433 1 23 368889999999999999999998
No 115
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.90 E-value=3.2 Score=43.24 Aligned_cols=162 Identities=12% Similarity=0.132 Sum_probs=95.9
Q ss_pred eEeecCCCccH-HHHHHHHcCCCceeccCC---CchHHHHHHHHHHHHHH--------------------hCCCCCCceE
Q 007802 277 IQFEDFANHNA-FELLSKYSSSHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTF 332 (589)
Q Consensus 277 Iq~EDf~~~~A-f~iL~ryr~~~~~FnDDi---QGTaaV~lAgll~Alr~--------------------~g~~l~d~ri 332 (589)
|+.-..+..|- .+.+.+.+..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 56555555553 222333222566666422 23444578888888762 3668999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcE
Q 007802 333 LFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTM 412 (589)
Q Consensus 333 v~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtv 412 (589)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... ..... ..+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~-~~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAE-EKV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHH-HHT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHH-Hhc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998753 264 34888886421 01100 011 00112479999885 899
Q ss_pred EEeecCC----CCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEE
Q 007802 413 LMGTSGV----GKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAI 466 (589)
Q Consensus 413 LIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~Grai 466 (589)
++=.--. .++++++.++.|. +.-+|.-.|+-..--|-.-.+|++ +|+.-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG~~vd~~aL~~aL~--~g~i~ 277 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARGAICVAEDVAAALE--SGQLR 277 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCCchhCHHHHHHHHH--cCCCc
Confidence 8854322 2688998888885 567888887733223322334443 46544
No 116
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.80 E-value=1.5 Score=42.32 Aligned_cols=98 Identities=12% Similarity=0.219 Sum_probs=59.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988653 531 02468888874 1 1122222111 11123578899986
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007802 410 PTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (589)
Q Consensus 410 PtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 448 (589)
+|++| ++. +.--.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav-~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSI-KPDLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECS-CTTTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 444 3345778888877654 4557877777664
No 117
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.42 E-value=0.62 Score=46.39 Aligned_cols=49 Identities=24% Similarity=0.270 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...|++.+++..+.++++.+++|+|||.+|.++|..+.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666665532 23 68888875
No 118
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.39 E-value=1.1 Score=43.93 Aligned_cols=81 Identities=27% Similarity=0.427 Sum_probs=53.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
.|++.+++..+.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887754 252 58888874 111 1111112211
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCC
Q 007802 394 EHAPIKSLLDAVKAIKPTMLMGTSGVG 420 (589)
Q Consensus 394 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 420 (589)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3456666 4 489998665543
No 119
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=86.21 E-value=4.5 Score=41.93 Aligned_cols=176 Identities=18% Similarity=0.202 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007802 308 TASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 367 (589)
Q Consensus 308 TaaV~lAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i 367 (589)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455567777777652 2467999999999999999999998853 264 58
Q ss_pred EEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEec
Q 007802 368 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFAL 443 (589)
Q Consensus 368 ~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaL 443 (589)
+.+|+..- . .. .+ ....+|.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~~----~--~~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRSTL----S--GV-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSCC----T--TS-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCcc----c--cc-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 88886421 1 01 01 113589999986 898884321 23678889999885 56688888
Q ss_pred CCCCCCCCCCHHHHhccccCcEEEeeCCCCC--cceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007802 444 SNPTSQSECTAEEAYTWSKGQAIFASGSPFD--PVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEAL 521 (589)
Q Consensus 444 SNPt~~~E~t~eda~~wT~GraifAsGSPf~--pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aL 521 (589)
|+-..--|-.-.+|++ +|+.-.|.=-=|+ |.. +. .-=+..|+.+-|=+|-...- -.+.|...+++.|
T Consensus 258 aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~~---~L~~~~nvilTPHia~~t~e-----~~~~~~~~~~~nl 326 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-RS---EFHTTPNTVLMPHQGSATVE-----TRMAMGKLVLANL 326 (340)
T ss_dssp SCC----------------CCSSEEEESCCSSSSSC-CS---HHHHSSSEEECSSCSSCCHH-----HHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-cc---chhhCCCEEEcCcCCcCCHH-----HHHHHHHHHHHHH
Confidence 7754334444445554 4543222111111 110 00 11234567777766532111 1234555555555
Q ss_pred HhccC
Q 007802 522 AAQVT 526 (589)
Q Consensus 522 A~~v~ 526 (589)
.....
T Consensus 327 ~~~~~ 331 (340)
T 4dgs_A 327 AAHFA 331 (340)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55543
No 120
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=86.10 E-value=2.5 Score=43.02 Aligned_cols=112 Identities=20% Similarity=0.188 Sum_probs=66.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
++.+++..... ....++.|+|+|..|-.+++.+... .+. ++++++|+. .++ .....+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555554432 3567999999999998888877543 233 678888874 222 2222333321
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEeecCCC-CCCCHHHHHHHHcCCCCcEEEecC--CCCCCCCCCHH
Q 007802 394 ---EHAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALS--NPTSQSECTAE 455 (589)
Q Consensus 394 ---~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLS--NPt~~~E~t~e 455 (589)
+.. ..++.|++ . .|++|=++..+ ..|..+.+ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899988 4 89998665432 23333222 2455888883 455 6777764
No 121
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.07 E-value=0.56 Score=52.51 Aligned_cols=38 Identities=26% Similarity=0.404 Sum_probs=33.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999998764 76 789999987
No 122
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=85.76 E-value=6.7 Score=40.16 Aligned_cols=137 Identities=11% Similarity=0.093 Sum_probs=87.4
Q ss_pred eEeecCCCccHHHHHHHHcCCCceeccCCCc---hHHHHHHHHHHHHHH-------------------hCCCCCCceEEE
Q 007802 277 IQFEDFANHNAFELLSKYSSSHLVFNDDIQG---TASVVLAGILSALKL-------------------VGGTLADQTFLF 334 (589)
Q Consensus 277 Iq~EDf~~~~Af~iL~ryr~~~~~FnDDiQG---TaaV~lAgll~Alr~-------------------~g~~l~d~riv~ 334 (589)
|+.--.+..|- ++-.--+..+.+.|---.. +|=-+++.+|+..|- .+..|.+.+|.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555554442 1111123466766653333 344478888887761 234688999999
Q ss_pred eCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEE
Q 007802 335 LGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLM 414 (589)
Q Consensus 335 ~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLI 414 (589)
+|.|..|..+|+.+... |+ +++.+|+.. . ..+ + .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~--~~~---~-~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----I--KGI---E-DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----C--CSC---T-TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----c--HHH---H-hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 64 588888752 1 111 1 1111 2379999986 89988
Q ss_pred eec----CCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 415 GTS----GVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 415 G~S----~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
=.- ...++++++.++.|. +..++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 641 234789999999885 5678887875
No 123
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=85.67 E-value=6.7 Score=39.85 Aligned_cols=117 Identities=18% Similarity=0.195 Sum_probs=79.1
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 007802 296 SSHLVFNDDIQ---GTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALE 351 (589)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~lAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~ 351 (589)
..+.+.|---- .+|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 35666664322 2344467888877652 1457899999999999999999998864
Q ss_pred HHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHH
Q 007802 352 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEV 427 (589)
Q Consensus 352 ~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteev 427 (589)
.|+ +++.+|+.. . ... + ...+|.|+++. .|+++=.- ...+.++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~---~~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----K---PLP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----C---SSS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----c---ccc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 264 588888742 1 111 1 13579999886 89888552 2246788888
Q ss_pred HHHHHcCCCCcEEEecCCC
Q 007802 428 VEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 428 v~~Ma~~~erPIIFaLSNP 446 (589)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88774 56788888873
No 124
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=85.65 E-value=0.71 Score=40.89 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999998865 375 47888864
No 125
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.61 E-value=2.1 Score=46.47 Aligned_cols=98 Identities=13% Similarity=0.160 Sum_probs=58.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch-hhh-cccCCCCCHHHHHhc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWA-HEHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~-~fa-~~~~~~~~L~e~V~~ 407 (589)
.+|.|+|+|..|.++|..|... |. +++++|+.- ++ +..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----SK---VDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----HH---HHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999988653 64 577887641 11 111111 000 001123567787765
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 408 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
. +|+++| ++...+...+++++.+..+. +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 377766 44444445677777776544 345777777743
No 126
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.53 E-value=1.1 Score=44.96 Aligned_cols=48 Identities=8% Similarity=0.141 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.|+..+++-.|.. .+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4666667665654 56899999999999999887754 365 679988874
No 127
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.52 E-value=0.5 Score=47.18 Aligned_cols=103 Identities=16% Similarity=0.239 Sum_probs=61.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc-hhchhhhccc--CCCCCHHHHH
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAHEH--APIKSLLDAV 405 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~-~~k~~fa~~~--~~~~~L~e~V 405 (589)
..||.|+|||+.|..+|..|... |. ..+++++|++---.++. .+. .+...|..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEAE--VLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHH--HHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHH--HHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 35899999999999999877542 53 14799999863100000 010 0111121110 000132 455
Q ss_pred hccCCcEEEeecCCCCCCCH----------------HHHHHHHcCCCCcEEEecCCCCC
Q 007802 406 KAIKPTMLMGTSGVGKTFTK----------------EVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g~Fte----------------evv~~Ma~~~erPIIFaLSNPt~ 448 (589)
+ ..|++|=+...+. ++ ++++.|+++++..+|+.++||..
T Consensus 74 ~--~aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 R--DADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 5 3788874443332 23 88999988888889999999984
No 128
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=85.43 E-value=0.5 Score=51.26 Aligned_cols=126 Identities=17% Similarity=0.253 Sum_probs=75.2
Q ss_pred CceEEEeCcChH-HHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh-c--ccCC---CCCH
Q 007802 329 DQTFLFLGAGEA-GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-H--EHAP---IKSL 401 (589)
Q Consensus 329 d~riv~~GAGsA-g~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa-~--~~~~---~~~L 401 (589)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++-+.+.+....+. . .... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566655431 01442 25799999863 22111111112221 1 1111 1479
Q ss_pred HHHHhccCCcEEEeecCCCC---------------C-------------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 402 LDAVKAIKPTMLMGTSGVGK---------------T-------------------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g---------------~-------------------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.++++. .|++|=+.+.++ . .=+++++.|.++|..-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899986 999886655432 1 1358899999999999999999998
Q ss_pred CCCCCCHHHHhccccCcEEEeeC
Q 007802 448 SQSECTAEEAYTWSKGQAIFASG 470 (589)
Q Consensus 448 ~~~E~t~eda~~wT~GraifAsG 470 (589)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2333444544332455543
No 129
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.34 E-value=0.94 Score=43.17 Aligned_cols=93 Identities=14% Similarity=0.196 Sum_probs=57.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEE-EcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL-VDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~-vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~v 408 (589)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+-- ....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988652 53 3554 5553 1112222222210 111244566764
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 409 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 409 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
+|++| ++. +....+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lav-p~~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAV-PYDSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EES-CGGGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeC-ChHHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 78877 343 33466788877765 45669999999884
No 130
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.32 E-value=5.3 Score=40.96 Aligned_cols=91 Identities=14% Similarity=0.183 Sum_probs=60.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- . .....+- ....+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~~----~-----~~~~~~g---~~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHRK----V-----NVEKELK---ARYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC----H-----HHHHHHT---EEECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCcc----h-----hhhhhcC---ceecCHHHH
Confidence 68999999999999999999998753 263 5888887521 0 1001110 011378898
Q ss_pred HhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 405 VKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 405 V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
++. .|+++=.-. ..+.++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 885 898874322 13578888888884 45 7766664
No 131
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.07 E-value=0.54 Score=46.21 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=32.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 45678999999999999999999775 76 6899999973
No 132
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=85.06 E-value=3.6 Score=43.16 Aligned_cols=177 Identities=15% Similarity=0.074 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCe
Q 007802 308 TASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKK 366 (589)
Q Consensus 308 TaaV~lAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~ 366 (589)
+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+.. .|+ +
T Consensus 134 vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~ 201 (365)
T 4hy3_A 134 VAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------R 201 (365)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------E
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------E
Confidence 445567777766652 2356889999999999999999997743 264 5
Q ss_pred EEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEee----cCCCCCCCHHHHHHHHcCCCCcEEEe
Q 007802 367 IWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGT----SGVGKTFTKEVVEAMASFNEKPVIFA 442 (589)
Q Consensus 367 i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFa 442 (589)
++.+|+.. .. .. .....-...+|.|+++. .|+++=. ....+.|+++.++.|. +.-|+.=
T Consensus 202 V~~~d~~~----~~----~~----~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN 264 (365)
T 4hy3_A 202 IRVFDPWL----PR----SM----LEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFIL 264 (365)
T ss_dssp EEEECSSS----CH----HH----HHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEE
T ss_pred EEEECCCC----CH----HH----HhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEE
Confidence 77777641 00 00 01111112589999986 8998833 2334689999999995 5678887
Q ss_pred cCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeC----CCCccccccchhhhHHHHHhCCcccCHHHHHHHH
Q 007802 443 LSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFV----PGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAAS 518 (589)
Q Consensus 443 LSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~----p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA 518 (589)
.|.-..--|-.-.+|++ .|+.- | |. +|. ...... -=+..|+.+-|=+|-.. ..--+.|...++
T Consensus 265 ~aRG~~vde~aL~~aL~--~g~i~-a-aL---DV~-~~EPl~~~~pL~~~~nvilTPHia~~t-----~e~~~~~~~~~~ 331 (365)
T 4hy3_A 265 LSRADVVDFDALMAAVS--SGHIV-A-AS---DVY-PEEPLPLDHPVRSLKGFIRSAHRAGAL-----DSAFKKMGDMVL 331 (365)
T ss_dssp CSCGGGSCHHHHHHHHH--TTSSE-E-EE---SCC-SSSSCCTTCGGGTCTTEEECCSCSSCC-----HHHHHHHHHHHH
T ss_pred CcCCchhCHHHHHHHHH--cCCce-E-Ee---eCC-CCCCCCCCChhhcCCCEEECCccccCH-----HHHHHHHHHHHH
Confidence 77643223333334443 56654 3 32 111 001110 12456788888766422 122345556666
Q ss_pred HHHHhccC
Q 007802 519 EALAAQVT 526 (589)
Q Consensus 519 ~aLA~~v~ 526 (589)
+-|.....
T Consensus 332 ~ni~~~~~ 339 (365)
T 4hy3_A 332 EDMDLMDR 339 (365)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66666654
No 133
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.05 E-value=0.83 Score=46.21 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=60.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCC----chhchhhhccc--CCCCCHHHH
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL----QHFKKPWAHEH--APIKSLLDA 404 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l----~~~k~~fa~~~--~~~~~L~e~ 404 (589)
||.|+|||..|.++|..+... |+ -.+++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887542 22 25799999862 211111 11100010110 00135544
Q ss_pred HhccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 405 VKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
++. .|++|=+.+.+ |- .-+++.+.|++++..-+|+-+|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 654 88887554332 22 1157788888888888888899997
No 134
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.00 E-value=1.1 Score=45.38 Aligned_cols=103 Identities=19% Similarity=0.293 Sum_probs=61.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC---CCHHHHHh
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLDAVK 406 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~---~~L~e~V~ 406 (589)
.||.|+|||..|.++|-.+.. .|+ . +++++|.+-=-.++...+|.+.. .+......+ .++ ++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEAS-PIEGFDVRVTGTNNY-ADTA 69 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhH-hhcCCCeEEEECCCH-HHHC
Confidence 489999999999999997754 364 1 39999975200000000121111 111101111 456 6777
Q ss_pred ccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 407 AIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
. .|++|=+.+.|.. .-+++.+.+.+++..-+|+--|||.
T Consensus 70 ~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 70 N--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp T--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 5 8988866544421 1247888888899888888789998
No 135
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=84.92 E-value=0.63 Score=47.31 Aligned_cols=103 Identities=19% Similarity=0.238 Sum_probs=64.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCC---CCCHHHHHhc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVKA 407 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~---~~~L~e~V~~ 407 (589)
||.|+|||..|.++|-.|... |+ ...+.++|.+-=..++-.-+|.+....|-.+ .. ..+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKY-PKIVGGAD-YSLLKG 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCC-CEEEEESC-GGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCC-CEEEEeCC-HHHhCC
Confidence 799999999999999887653 54 1479999985211110000122211112111 11 134 677876
Q ss_pred cCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007802 408 IKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 408 vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+ |- | -+++++.|.+++..-+|+-.|||.
T Consensus 70 --aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp --CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 88887554443 32 1 256778899999999999999998
No 136
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=84.88 E-value=1.1 Score=46.21 Aligned_cols=106 Identities=17% Similarity=0.304 Sum_probs=65.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC---CCHHH
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLD 403 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~---~~L~e 403 (589)
++..||.|+|||..|.++|.+|.. .|+ + .+.++|.+-=..++-..+|.+. ..|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 456799999999999999988765 365 1 5999998521111000012211 1122111111 244 7
Q ss_pred HHhccCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007802 404 AVKAIKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 447 (589)
+++. .|++|=+.+.+ |- | -+++++.|.+++..-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7776 88887554433 32 1 256778888999999999999997
No 137
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=84.54 E-value=3.3 Score=42.57 Aligned_cols=189 Identities=18% Similarity=0.255 Sum_probs=111.4
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~ 354 (589)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4566666542 23444567777777652 26679999999999999999999988642
Q ss_pred ccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007802 355 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 430 (589)
Q Consensus 355 ~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~ 430 (589)
|+ +++.+|+..-- .......+ ...+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~~-------~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGHP-------ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCCC-------CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcch-------hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 65 58888875311 11111111 12468888886 88887431 2246899999998
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEee-----CCCCCcceeCCeeeCCCCccccccchhhhHHHHHhC
Q 007802 431 MASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFAS-----GSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISG 505 (589)
Q Consensus 431 Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAs-----GSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~ 505 (589)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.|. .-|.++ +. .-=+..|+.+-|=++- .
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~-----~ 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISG-----Q 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTT-----C
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCcccc-----C
Confidence 85 567888777743223333334443 45532221 112111 00 0123567888887652 1
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 007802 506 AIRVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 506 a~~Itd~m~~aAA~aLA~~v~ 526 (589)
...-.+.|...+++-|.....
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 222346667777777766653
No 138
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=84.33 E-value=11 Score=38.24 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=78.7
Q ss_pred CCCceecc-CCCc--hHHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007802 296 SSHLVFND-DIQG--TASVVLAGILSALKLV-----------------GGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (589)
Q Consensus 296 ~~~~~FnD-DiQG--TaaV~lAgll~Alr~~-----------------g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~ 355 (589)
..+++.|- +... +|=-+++.+|+..|-. ...|.+.+|.|+|.|..|..+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 45666663 3332 3334788888887631 236899999999999999999998864
Q ss_pred cCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHH
Q 007802 356 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAM 431 (589)
Q Consensus 356 ~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~M 431 (589)
.|+ +++.+|+..- .. .+ ....+|.|+++. .|+++=.- ...+.|+++.++.|
T Consensus 146 ~G~-------~V~~~dr~~~---------~~---~~----~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 146 LGA-------QVRGFSRTPK---------EG---PW----RFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp TTC-------EEEEECSSCC---------CS---SS----CCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCC-------EEEEECCCcc---------cc---Cc----ccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 264 5888887532 00 01 123478888875 89887542 23457888888887
Q ss_pred HcCCCCcEEEecCC
Q 007802 432 ASFNEKPVIFALSN 445 (589)
Q Consensus 432 a~~~erPIIFaLSN 445 (589)
. +..++.=.|+
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 4 5678887776
No 139
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.33 E-value=1.1 Score=45.12 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=58.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC--------cccCCcccCCchhchhhhcccCCCCCH
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG--------LIVSSRKESLQHFKKPWAHEHAPIKSL 401 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G--------Lv~~~r~~~l~~~k~~fa~~~~~~~~L 401 (589)
.||.|+|+|+-|..+|..|..+ | .+++++|+.- +...++ ....++ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999888653 5 4688888753 111100 000000 0 000011345
Q ss_pred HHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007802 402 LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 448 (589)
.++.+ .+|++| ++... -.++++++.++.+. +..+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44432 478777 55544 34678999988654 4567888999764
No 140
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.31 E-value=14 Score=39.51 Aligned_cols=193 Identities=15% Similarity=0.159 Sum_probs=118.3
Q ss_pred cCCCceeccCC---CchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007802 295 SSSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (589)
Q Consensus 295 r~~~~~FnDDi---QGTaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~ 353 (589)
+..+++||--- +.+|=-++|.+|+..|- .+..|++.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 35788888643 33555678888888763 25678999999999999999999987543
Q ss_pred hccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007802 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 429 (589)
Q Consensus 354 ~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~ 429 (589)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 65 5888887511 1100 01 123589999987 898874321 23789999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCC-CC--cceeCCee-eCCCCccccccchhhhHHHHHhC
Q 007802 430 AMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSP-FD--PVEYNGKV-FVPGQGNNAYIFPGLGLGLIISG 505 (589)
Q Consensus 430 ~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSP-f~--pv~~~G~~-~~p~Q~NN~~iFPGiglG~~~~~ 505 (589)
.|. +..++.=.|.=..--|-.-.+|++ .|+. .+.|.. |+ |..-+... ..--+..|..+-|=+|-...-
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL~--~g~i-~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~e-- 304 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVLQ--EGHL-AGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEE-- 304 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHHH--TTSE-EEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHH--
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHHH--cCCc-cEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHH--
Confidence 995 677888888754333333334453 5664 333332 22 21111000 011356789999987643222
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 007802 506 AIRVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 506 a~~Itd~m~~aAA~aLA~~v~ 526 (589)
--+.|...+++.|.+...
T Consensus 305 ---a~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 305 ---AQERIGTEVTRKLVEYSD 322 (416)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHh
Confidence 224566667777776653
No 141
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=84.27 E-value=4.6 Score=44.15 Aligned_cols=99 Identities=11% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch-hchhhhcccCCCCCHH----
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAHEHAPIKSLL---- 402 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~-~k~~fa~~~~~~~~L~---- 402 (589)
-+.||||+|||+.|-++|.+|++- .++. ..+|.+.|++--. + ++.+ ....+....-...+..
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~~---~--~~~~~~g~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGTK---V--DVAQQYGVSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCCS---C--CHHHHHTCEEEECCCCTTTHHHHTG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchhh---h--hHHhhcCCceeEEeccchhHHHHHH
Confidence 357899999999999999999774 2432 1468888875211 1 1111 1112221111112333
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
.+|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HHhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 34543 59999644 335788888876642 234556666
No 142
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=83.90 E-value=7 Score=40.65 Aligned_cols=173 Identities=15% Similarity=0.071 Sum_probs=101.0
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 352 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~ 352 (589)
..+.+.|--- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 3455555322 23444577778877752 2567999999999999999999998854
Q ss_pred HhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHH
Q 007802 353 SKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVV 428 (589)
Q Consensus 353 ~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv 428 (589)
.|+ +++.+|+... . ....+. . ......+|.|+++. .|+++=.- ...+.|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~---~----~~~~~~-~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM---A----PELEKE-T--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC---C----HHHHHH-H--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc---C----HHHHHh-C--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 265 4887887521 0 000100 0 01123589999986 89888331 22368999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeCCCCccccccchhhhH
Q 007802 429 EAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGL 499 (589)
Q Consensus 429 ~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGigl 499 (589)
+.|. +..+|.=.|+-..--|-.-.+|++ +|+.-.|.--=|++--. ... .--+..|..+-|=++-
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~--pL~~~~nvilTPHia~ 308 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDH--PWRYMPNQAMTPHTSG 308 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTC--GGGTSTTBCCCCSCGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCC--hhhcCCCEEECCcCCC
Confidence 9995 677888887744323333334443 56654343322221100 000 0113457777777653
No 143
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=83.61 E-value=12 Score=38.82 Aligned_cols=120 Identities=14% Similarity=0.205 Sum_probs=81.5
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHH----------h----------CCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007802 297 SHLVFNDDIQ---GTASVVLAGILSALKL----------V----------GGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (589)
Q Consensus 297 ~~~~FnDDiQ---GTaaV~lAgll~Alr~----------~----------g~~l~d~riv~~GAGsAg~GiA~ll~~~~~ 353 (589)
.+.+.|---- .+|=-+++-+|+..|- . +..|.+.+|.|+|.|..|..+|+.+...
T Consensus 93 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~-- 170 (343)
T 2yq5_A 93 NLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM-- 170 (343)
T ss_dssp -CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC--
Confidence 5777775333 3444568888877751 2 3468899999999999999999988642
Q ss_pred hccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007802 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 429 (589)
Q Consensus 354 ~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~ 429 (589)
|+ +++.+|+..- .... ..+ ...+|.|+++. .|+++=.-- ..+.|+++.++
T Consensus 171 ---G~-------~V~~~d~~~~------~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~ 224 (343)
T 2yq5_A 171 ---GA-------KVIAYDVAYN------PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQLK 224 (343)
T ss_dssp ---TC-------EEEEECSSCC------GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEECCChh------hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHHh
Confidence 64 5888887521 0010 111 11389999986 899885432 24789999999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007802 430 AMASFNEKPVIFALSNPT 447 (589)
Q Consensus 430 ~Ma~~~erPIIFaLSNPt 447 (589)
.|. +..++.=.|.-.
T Consensus 225 ~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 225 EMK---KSAYLINCARGE 239 (343)
T ss_dssp HSC---TTCEEEECSCGG
T ss_pred hCC---CCcEEEECCCCh
Confidence 995 677888777633
No 144
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.57 E-value=2.9 Score=43.30 Aligned_cols=100 Identities=19% Similarity=0.160 Sum_probs=58.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhc--hhhhcc---cCC---CCC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK--KPWAHE---HAP---IKS 400 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k--~~fa~~---~~~---~~~ 400 (589)
..||.|+|+|+-|..+|..|... | .+++++|++--.. +.+.... ..|-.. .+. ..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~----~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHV----DEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHH----HHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHH----HHHHHcCCCcccCCCCccCCCeEEECC
Confidence 35899999999999999988653 5 3577787741100 0011100 001000 011 147
Q ss_pred HHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007802 401 LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (589)
Q Consensus 401 L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 448 (589)
+.|+++. +|++| ++. +--+.+++++.++.+. +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888875 77766 333 2236778888877654 3567777888553
No 145
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.52 E-value=1.8 Score=41.84 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=57.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhc---hhhhcccCCCCCHHHHHhc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK---KPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k---~~fa~~~~~~~~L~e~V~~ 407 (589)
||.|+|+|..|..+|..|... | .+++++|++- ++.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988653 5 3688888752 1111121110 000 00000123 466764
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 408 IKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 408 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
.|++| ++..+. ..+++++.+..+. +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 88877 444333 3689999888654 456777789865
No 146
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.38 E-value=2.3 Score=40.21 Aligned_cols=80 Identities=13% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
..+...||.|+|+|..|..+|..+... | .+++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346678999999999999999988652 5 368887753 11 1
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
++ ++|++| ++.. ....+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi-~av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVI-MAVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEE-ECSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEE-EcCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 356655 2222 2345677777654333678888999653
No 147
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=83.30 E-value=0.46 Score=48.43 Aligned_cols=103 Identities=21% Similarity=0.318 Sum_probs=61.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCC-CCCHHHHHhccC
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP-IKSLLDAVKAIK 409 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~-~~~L~e~V~~vk 409 (589)
||.|+|||+.|..+|-+|+. .++ -..++|+|.+-=-.++...+|.+. .+|.++..- ..+ .++++.
T Consensus 2 KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a~~~-- 67 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGS-YGDLEG-- 67 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECC-HHHhCC--
Confidence 89999999999998887654 244 258999998620000000012211 122211000 023 566765
Q ss_pred CcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 410 PTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 410 PtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||.
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 88888544444 32 1256777888889999999999998
No 148
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=83.27 E-value=12 Score=38.38 Aligned_cols=121 Identities=19% Similarity=0.163 Sum_probs=81.3
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007802 296 SSHLVFNDDIQG---TASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (589)
Q Consensus 296 ~~~~~FnDDiQG---TaaV~lAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~ 353 (589)
..+.+.|---.. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 467777743333 344478888887651 34678999999999999999999988642
Q ss_pred hccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007802 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 429 (589)
Q Consensus 354 ~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~ 429 (589)
|+ +++.+|+..- .... .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~------~~~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYPM------KGDH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSCC------SSCC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCcc------hhhH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 5888887521 1111 1121 1379999986 898885421 23678999999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007802 430 AMASFNEKPVIFALSNPT 447 (589)
Q Consensus 430 ~Ma~~~erPIIFaLSNPt 447 (589)
.|. +..++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 995 566777777643
No 149
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=83.13 E-value=0.82 Score=46.91 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=66.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC--cccCCcccCCchhchhhhcccCCC--CCHH
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG--LIVSSRKESLQHFKKPWAHEHAPI--KSLL 402 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G--Lv~~~r~~~l~~~k~~fa~~~~~~--~~L~ 402 (589)
.+..||.|+|||..|.++|-.+.. .|+ ..+.++|.+- -..++...+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 356799999999999999998865 254 2799999861 1111111112221 2333211111 1113
Q ss_pred HHHhccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 403 DAVKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
++++. .|++|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 56665 88887554433 21 2257888899999999999999997
No 150
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.93 E-value=7.7 Score=39.96 Aligned_cols=128 Identities=17% Similarity=0.132 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE
Q 007802 308 TASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW 368 (589)
Q Consensus 308 TaaV~lAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~ 368 (589)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+... |+ +++
T Consensus 101 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~ 168 (334)
T 2pi1_A 101 VAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVL 168 (334)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEE
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC-----cC-------EEE
Confidence 455577777877752 35679999999999999999999988642 64 588
Q ss_pred EEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 369 LVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 369 ~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
.+|+..- . . . ........+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|
T Consensus 169 ~~d~~~~------~-~--~----~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~a 230 (334)
T 2pi1_A 169 CYDVVKR------E-D--L----KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTA 230 (334)
T ss_dssp EECSSCC------H-H--H----HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECS
T ss_pred EECCCcc------h-h--h----HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC---CCcEEEECC
Confidence 8887521 0 0 0 0111112459999986 89887431 234689999999995 567888777
Q ss_pred CCCCCCCCCHHHHhccccCcEEE
Q 007802 445 NPTSQSECTAEEAYTWSKGQAIF 467 (589)
Q Consensus 445 NPt~~~E~t~eda~~wT~Graif 467 (589)
.-..--|-.-.+|++ +|+.-.
T Consensus 231 Rg~~vd~~aL~~aL~--~g~i~g 251 (334)
T 2pi1_A 231 RGKVVDTDALYRAYQ--RGKFSG 251 (334)
T ss_dssp CGGGBCHHHHHHHHH--TTCEEE
T ss_pred CCcccCHHHHHHHHH--hCCceE
Confidence 644333333334443 565543
No 151
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.89 E-value=0.99 Score=45.88 Aligned_cols=98 Identities=17% Similarity=0.400 Sum_probs=62.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCccc----CCchhchhhhcccCCC---CCHHH
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI---KSLLD 403 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~----~l~~~k~~fa~~~~~~---~~L~e 403 (589)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++-+ +|.+.. .+......+ .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAA-AELGVDIRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHH-HHHTCCCCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhh-hhcCCCeEEEECCCH-H
Confidence 689999999999999776542 54 369999986 22211 121111 111111111 344 6
Q ss_pred HHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 404 AVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+++. .|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 6765 8999866555431 1457888888889888777789998
No 152
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=82.86 E-value=2.1 Score=46.15 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=59.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh-----cccCCCCCHHHHH
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-----HEHAPIKSLLDAV 405 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa-----~~~~~~~~L~e~V 405 (589)
||.|+|+|..|..+|..|... |. +++++|+.. ++ +....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 699999999999999988652 63 578888641 11 111111100 0011235788888
Q ss_pred hcc-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 406 KAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 406 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
+.. ++|++| ++...+...+++++.+..+. +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488877 44444445677777776543 455778888854
No 153
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=82.63 E-value=12 Score=38.17 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=88.9
Q ss_pred cCCCceeccCCCc---hHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007802 295 SSSHLVFNDDIQG---TASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (589)
Q Consensus 295 r~~~~~FnDDiQG---TaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~ 353 (589)
+..+.+.|----. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG--- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH---
Confidence 3467777753333 344478888888762 2356889999999999999999998864
Q ss_pred hccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007802 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 429 (589)
Q Consensus 354 ~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Fteevv~ 429 (589)
.|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 --~G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 264 588888742 1 1 1 1 11221 12379999986 888885422 23678899999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEE
Q 007802 430 AMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAI 466 (589)
Q Consensus 430 ~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~Grai 466 (589)
.|. +..++.-.|.-..--|-.-.+|++ +|+.-
T Consensus 224 ~mk---~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ 255 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGPLVDTDAVIRGLD--SGKIF 255 (333)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 885 567888777743223333334443 45543
No 154
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.52 E-value=1 Score=42.86 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=55.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHh
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVK 406 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~ 406 (589)
-...||.|+|+|..|..+|+.+.. .|. +++++|++- ++ +. .++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHh
Confidence 345689999999999999998754 253 588887641 11 11 11111101126888887
Q ss_pred ccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
. +|++| ++..+. ..+++++ ++...+.-+|.-+||+..
T Consensus 83 ~--~DvVi-~av~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIF-VAVFRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEE-ECSCGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEE-ECCChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 4 89888 333332 3455554 333335668888999873
No 155
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=82.48 E-value=0.71 Score=47.41 Aligned_cols=104 Identities=18% Similarity=0.270 Sum_probs=63.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC--CCHHHHHhcc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~--~~L~e~V~~v 408 (589)
||.|+|||..|.++|..|+.. |+ -+.+.++|.+-=..++..-+|.+. ..|....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988763 55 157999998631111100012211 1121111111 134567776
Q ss_pred CCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 409 KPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 409 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+ |- .-+++.+.+.+++...+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88877444433 31 1256778888999999999999998
No 156
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=82.44 E-value=0.79 Score=47.10 Aligned_cols=106 Identities=17% Similarity=0.252 Sum_probs=64.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC--CCHHHHH
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAV 405 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~--~~L~e~V 405 (589)
+..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=..++-..+|.+. ..+......+ .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 365 2 6999998621110000012211 1121111111 1224677
Q ss_pred hccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 406 KAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+. .|++|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 88887555443 31 1257778888999888999999997
No 157
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=82.39 E-value=1.5 Score=43.64 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988653 63 68888875
No 158
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.34 E-value=1.8 Score=42.41 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=56.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
.||.|+|+|..|..+|..+... |. ..+++++|++. + .+...++.-..+ ....++.|+++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~----~---~~~~~~~~g~~~-~~~~~~~~~~~~-- 66 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD----R---SRDIALERGIVD-EATADFKVFAAL-- 66 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH----H---HHHHHHHTTSCS-EEESCTTTTGGG--
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH----H---HHHHHHHcCCcc-cccCCHHHhhcC--
Confidence 5899999999999999988653 32 14688888641 1 111111100000 011355566664
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcC--CCCcEEEecCCC
Q 007802 410 PTMLMGTSGVGKTFTKEVVEAMASF--NEKPVIFALSNP 446 (589)
Q Consensus 410 PtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNP 446 (589)
+|++| ++..+... +++++.+..+ .+..||.-+||-
T Consensus 67 aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 45444333 7888888765 355677766763
No 159
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=82.15 E-value=1.8 Score=45.37 Aligned_cols=96 Identities=20% Similarity=0.295 Sum_probs=53.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-----------ccCCC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-----------EHAPI 398 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-----------~~~~~ 398 (589)
.||+|+|||..|..+++.|.+ .|- .-.++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998666666665543 231 00368888874 111 2222222211 11112
Q ss_pred CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 399 KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 399 ~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
.++.++++..++|++|=+++. .+..+++++..+.. ..+| =+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888988899999977653 24566776655433 3444 2544
No 160
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.91 E-value=3.7 Score=36.89 Aligned_cols=97 Identities=12% Similarity=0.084 Sum_probs=54.3
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHh
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVK 406 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~ 406 (589)
..+|+|.|| |-.|..+++.|++ .| .+++.++++.- ....+......+.. +-.+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8777777777754 25 36888887521 10111011111111 1122235778887
Q ss_pred ccCCcEEEeecCCCCC---------CCHHHHHHHHcCCCCcEEEec
Q 007802 407 AIKPTMLMGTSGVGKT---------FTKEVVEAMASFNEKPVIFAL 443 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~---------Fteevv~~Ma~~~erPIIFaL 443 (589)
. +|++|=+.+.... .+..++++|.+..-+.|||.=
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~S 110 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 5 8999987765431 145666666654444556543
No 161
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=81.70 E-value=2.1 Score=43.34 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=64.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc--cCcccCCcccCCchhchhhhcccCCC----CCHHH
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWAHEHAPI----KSLLD 403 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~--~GLv~~~r~~~l~~~k~~fa~~~~~~----~~L~e 403 (589)
||+|.|| |..|..++..|+. .|+ ...+.++|. +-=-.++-..+|.+.. ++......+ .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEEeCCcchHH
Confidence 7999999 9999998887753 254 256999997 3100000000122111 222100011 13677
Q ss_pred HHhccCCcEEEeecCCCC---C-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 404 AVKAIKPTMLMGTSGVGK---T-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~g---~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+++. .|++|=+.+.+. - .+++++++|.+++ +.+|+--|||.
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 8876 898886666552 1 3568899999999 99999999998
No 162
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=81.48 E-value=1.4 Score=47.35 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHhcCCceeeEeecCCCccHHHHHHHHc-CCCcee--ccCCCchHHHHHHHHHHHHHHhC--------CCC
Q 007802 259 LLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYS-SSHLVF--NDDIQGTASVVLAGILSALKLVG--------GTL 327 (589)
Q Consensus 259 fidefv~av~~~fGp~~lIq~EDf~~~~Af~iL~ryr-~~~~~F--nDDiQGTaaV~lAgll~Alr~~g--------~~l 327 (589)
.+..+++.+...+ |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-|+..+.... ..-
T Consensus 134 ~~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 134 DVVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 3566666666677 54 5555444445567888886 467754 66666777776677776654321 112
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...+|||+|||.||+..|..+.+ .|+ ++.++|.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 34679999999999999988754 264 56777753
No 163
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=81.47 E-value=1.6 Score=44.31 Aligned_cols=35 Identities=20% Similarity=0.443 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 57999999999999999988653 32 1368888875
No 164
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=81.43 E-value=3.8 Score=42.25 Aligned_cols=177 Identities=17% Similarity=0.158 Sum_probs=105.8
Q ss_pred hHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007802 308 TASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (589)
Q Consensus 308 TaaV~lAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD 371 (589)
+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 344577777777662 35689999999999999999999988543 64 588888
Q ss_pred ccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 372 SKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 372 ~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+.. +. ..... . .....+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|.-.
T Consensus 171 r~~---~~----~~~~~----~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk---~gailIN~aRG~ 233 (324)
T 3hg7_A 171 RSG---RE----RAGFD----Q-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK---PGAILFNVGRGN 233 (324)
T ss_dssp SSC---CC----CTTCS----E-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC---TTCEEEECSCGG
T ss_pred CCh---HH----hhhhh----c-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC---CCcEEEECCCch
Confidence 764 11 11111 0 1123579999986 88887431 224678888888884 567888777633
Q ss_pred CCCCCCHHHHhccccCcEEEe-----eCCCCCcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHH
Q 007802 448 SQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALA 522 (589)
Q Consensus 448 ~~~E~t~eda~~wT~GraifA-----sGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA 522 (589)
.--|-.-.+|++ +|+.-.| ..-|.++- . .-=+..|+.+-|=++- .+ ....|...+++-|.
T Consensus 234 ~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t-~~~~~~~~~~~nl~ 298 (324)
T 3hg7_A 234 AINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YS-FPDDVAQIFVRNYI 298 (324)
T ss_dssp GBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CC-CHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------cc-HHHHHHHHHHHHHH
Confidence 223333334443 4543211 11122110 0 0113567888887653 22 23567777777777
Q ss_pred hccCcc
Q 007802 523 AQVTQE 528 (589)
Q Consensus 523 ~~v~~~ 528 (589)
....-+
T Consensus 299 ~~~~G~ 304 (324)
T 3hg7_A 299 RFIDGQ 304 (324)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 776543
No 165
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=81.06 E-value=3.8 Score=43.93 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=61.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~ 407 (589)
..||.|+|+|..|..+|..|... |. +++++|+. .+ .+....+.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999988652 64 47777764 11 12222111100 01123578888875
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 408 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
. +||++| ++...+...+++++.+.... +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478777 55544445677887776544 355777888854
No 166
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=80.95 E-value=12 Score=38.47 Aligned_cols=97 Identities=12% Similarity=0.050 Sum_probs=63.3
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (589)
+..|.+.+|.|+|.|..|..+|+.+..+ .|+ +++.+|+..- . ....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHHH
Confidence 5679999999999999999999987522 264 5888887521 1 11111 01 0011147889
Q ss_pred HHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007802 404 AVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALSNP 446 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNP 446 (589)
+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 888874421 23688888998884 45677766653
No 167
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=80.86 E-value=11 Score=38.15 Aligned_cols=176 Identities=13% Similarity=0.099 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007802 308 TASVVLAGILSALKLV----------------GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (589)
Q Consensus 308 TaaV~lAgll~Alr~~----------------g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD 371 (589)
+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 3445667777666521 1468899999999999999999988653 64 588888
Q ss_pred ccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 372 SKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 372 ~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+..- .... ++ ...+|.|+++. .|+++=.- ...+.++++.++.|. +..+|.=.|.-.
T Consensus 153 r~~~-------~~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSSV-------DQNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSCC-------CTTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred cccc-------cccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 7521 1111 11 23589999986 88887432 224678899888885 677888777633
Q ss_pred CCCCCCHHHHhccccCcEEEeeCCCC--CcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHhcc
Q 007802 448 SQSECTAEEAYTWSKGQAIFASGSPF--DPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQV 525 (589)
Q Consensus 448 ~~~E~t~eda~~wT~GraifAsGSPf--~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v 525 (589)
.--|-.-.+|++ +|+.-.|.=--| +|. ..-=+..|..+-|=++=| ....-.+.|...+++-|....
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 222333334443 344332211111 121 112345688888876511 234456778888888887776
Q ss_pred Cc
Q 007802 526 TQ 527 (589)
Q Consensus 526 ~~ 527 (589)
.-
T Consensus 281 ~~ 282 (290)
T 3gvx_A 281 EG 282 (290)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 168
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=80.65 E-value=1.8 Score=45.96 Aligned_cols=120 Identities=24% Similarity=0.268 Sum_probs=66.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V 405 (589)
.++++||+|+|.|.+|+++|++|.+ .| .++...|.+-.-.....+.|.....++-.. .. -.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g-~~---~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCG-SH---PLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEES-CC---CGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEEC-CC---hHHhh
Confidence 5778999999999999999888765 37 468888885210000000111111111100 00 01112
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeee
Q 007802 406 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVF 483 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~ 483 (589)
+. .+|.+|=-++.+ .=++++.++..+ .-||| +.+ |-++...+++.|-.||| ||||-
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~-------~~~----e~~~~~~~~~~IaVTGT-------nGKTT 125 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALEK--QIPVL-------TEV----ELAYLVSESQLIGITGS-------NGKTT 125 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHHT--TCCEE-------CHH----HHHHHHCCSEEEEEECS-------SCHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHHC--CCcEE-------eHH----HHHHHhcCCCEEEEECC-------CCHHH
Confidence 21 168777555555 346777766543 45665 222 33444567788889997 67654
No 169
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.52 E-value=3.3 Score=44.55 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=59.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch-hhh-cccCCCCCHHHHHhc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWA-HEHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~-~fa-~~~~~~~~L~e~V~~ 407 (589)
.||.|+|+|..|..+|..|... |. +++++|+.. ++ +....+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----SK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----HH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----HH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988652 64 478888641 11 111111 000 000112578888863
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 408 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
+ +||++| ++...+...+++++.+..+. +..||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588777 44444445677887776543 345778888854
No 170
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=80.52 E-value=4.1 Score=40.71 Aligned_cols=93 Identities=20% Similarity=0.277 Sum_probs=52.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh---cc-------c--CC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---HE-------H--AP 397 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa---~~-------~--~~ 397 (589)
.||.|+|+|..|..+|..+... | .+++++|++.= + +...++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ----R---IKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----H---HHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH----H---HHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999887542 5 35888887411 0 111111000 00 0 01
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCC
Q 007802 398 IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSN 445 (589)
Q Consensus 398 ~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSN 445 (589)
..++.++++. +|++|= +... -..+++++.++.+. +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~-~v~~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILI-VVPA-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEE-eCCc-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777764 787763 3322 23578888776543 3455665644
No 171
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=80.45 E-value=3.4 Score=41.54 Aligned_cols=111 Identities=11% Similarity=0.168 Sum_probs=63.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCC-cccCCchhch--hhhcc---cCC---CC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS-RKESLQHFKK--PWAHE---HAP---IK 399 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~-r~~~l~~~k~--~fa~~---~~~---~~ 399 (589)
..||.|+|+|..|..+|..+... |........+++++|++.-.... +.+.+..... .|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 35899999999999999998764 21000001468888875321100 0000111000 01000 001 14
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007802 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (589)
Q Consensus 400 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 448 (589)
++.|+++. .|++| ++..+ -..+++++.+..+. +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888875 88777 44433 47789999887654 4668889999654
No 172
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=80.33 E-value=1.4 Score=45.63 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 57788999999999999999999876 76 789999976
No 173
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=80.31 E-value=2.2 Score=41.87 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=56.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 408 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~v 408 (589)
.||.|+|+ |..|..+|..+.. .|. +++++|++- + .+...+. ..-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~----~---~~~~~~~----~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP----E---GRDRLQG----MGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH----H---HHHHHHH----TTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----H---HHHHHHh----cCCCcCCHHHHhcC-
Confidence 48999999 9999999998864 253 688888641 1 1111111 11111355667764
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 409 KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 409 kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
+|++| ++..+.. .+++++.+..+. +..||.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 88887 4443433 688888887643 456777788854
No 174
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=80.22 E-value=1.5 Score=44.20 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
.|++.+++-.| +.|++|+|||.+|.+++..|... | .+|+++++. .++.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 88999999999999988877652 4 468888875 22221122 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCC----CCCCHHHHH-HHHcCCCCcEEEecC-CC
Q 007802 394 EHAPIKSLLDAVKAIKPTMLMGTSGVG----KTFTKEVVE-AMASFNEKPVIFALS-NP 446 (589)
Q Consensus 394 ~~~~~~~L~e~V~~vkPtvLIG~S~~~----g~Fteevv~-~Ma~~~erPIIFaLS-NP 446 (589)
......+|. ++|++|-++..+ -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 111112221 689999766544 146777554 343 355666553 44
No 175
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.15 E-value=0.97 Score=42.04 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=58.9
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh---c-ccCCCCCHHHHH
Q 007802 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---H-EHAPIKSLLDAV 405 (589)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa---~-~~~~~~~L~e~V 405 (589)
||+|+| +|..|..+|..+.+ .| .+++++|++- ++ +...++.+. . ..-...++.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASITGMKNEDAA 62 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEEEEEHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCChhhHHHHH
Confidence 799999 99999999988754 25 3688888741 11 111111110 0 000124688888
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007802 406 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 448 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 448 (589)
+. .|++|=+ ..+ -..+++++.+.+..+..+|.-+||+.+
T Consensus 63 ~~--~D~Vi~~-~~~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 63 EA--CDIAVLT-IPW-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HH--CSEEEEC-SCH-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred hc--CCEEEEe-CCh-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 76 8988843 323 235677777654334679999999774
No 176
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=80.13 E-value=18 Score=38.18 Aligned_cols=191 Identities=15% Similarity=0.118 Sum_probs=109.3
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~ 354 (589)
..+++||--- +.+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 4677787543 34455578888888773 25679999999999999999999988642
Q ss_pred ccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007802 355 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 430 (589)
Q Consensus 355 ~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~ 430 (589)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 64 5888887421 1010 01 112479999986 88887442 2236889999998
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----eCCCCCcceeCCeeeCCCCccccccchhhhHHHHHhC
Q 007802 431 MASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISG 505 (589)
Q Consensus 431 Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifA-----sGSPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~ 505 (589)
|. +.-++.=.|.=.---|-.-.+|++ .|+.--| ..-|.++-..- ...-=+..|..+-|=+|-...-
T Consensus 223 mk---~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~EP~~~~~~~--~~pL~~~~nvilTPHi~~~T~e-- 293 (404)
T 1sc6_A 223 MK---PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPTEPATNSDPF--TSPLAEFDNVLLTPHIGGSTQE-- 293 (404)
T ss_dssp SC---TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC---------CTT--TGGGTTCTTEEEECCCSCCSHH--
T ss_pred cC---CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCCCCCCccccc--cchhhcCCCEEECCCCCCCcHH--
Confidence 85 566888777632112222234443 4554211 11121100000 0001235688888877632221
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 007802 506 AIRVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 506 a~~Itd~m~~aAA~aLA~~v~ 526 (589)
--+.|...+++.|.+...
T Consensus 294 ---a~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 ---AQENIGLEVAGKLIKYSD 311 (404)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHc
Confidence 123455566666666654
No 177
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=80.13 E-value=8 Score=40.95 Aligned_cols=164 Identities=11% Similarity=0.039 Sum_probs=91.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-c-CCCCCH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-H-APIKSL 401 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~-~~~~~L 401 (589)
+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+... . . ..+.. . ....+|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~~----~---~-----~~~~~~G~~~~~~l 241 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRHRL----P---E-----SVEKELNLTWHATR 241 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC----C---H-----HHHHHHTCEECSSH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCCcc----c---h-----hhHhhcCceecCCH
Confidence 567999999999999999999998753 253 5787876421 0 0 11111 0 112478
Q ss_pred HHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCC--c
Q 007802 402 LDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFD--P 475 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~--p 475 (589)
.|+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-.---|-.-.+|++ +|+.--|.--=|. |
T Consensus 242 ~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP 314 (393)
T 2nac_A 242 EDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQP 314 (393)
T ss_dssp HHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSS
T ss_pred HHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCC
Confidence 898886 89888542 224688899988885 567888777632212222334443 5654333211111 1
Q ss_pred ceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007802 476 VEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 476 v~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 526 (589)
.. .+.. -=+..|..+-|=++-...- -...|...+++-|.....
T Consensus 315 ~~-~~~p--L~~~~nvilTPHia~~T~e-----~~~~~~~~~~~nl~~~~~ 357 (393)
T 2nac_A 315 AP-KDHP--WRTMPYNGMTPHISGTTLT-----AQARYAAGTREILECFFE 357 (393)
T ss_dssp CC-TTCG--GGTSTTBCCCCSCTTCSHH-----HHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCh--hHcCCCEEECCCCCcCcHH-----HHHHHHHHHHHHHHHHHc
Confidence 10 0110 1135578888877642211 123344455555555543
No 178
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=79.98 E-value=8.3 Score=40.06 Aligned_cols=162 Identities=15% Similarity=0.106 Sum_probs=97.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (589)
|..|++.+|.|+|.|..|..+|+.+... |+ +++.+|+.. . . . .... .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~--~--~-~---~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN--S--K-E---RARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH--H--H-H---HHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC--C--H-H---HHHh---cCceEeCCHHH
Confidence 5678999999999999999999988542 64 588888652 0 0 0 0000 00012258999
Q ss_pred HHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----eCCCCC
Q 007802 404 AVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA-----SGSPFD 474 (589)
Q Consensus 404 ~V~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifA-----sGSPf~ 474 (589)
+++. .|+++=.- ...+.|+++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.| ..-|.+
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~ 284 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPIL 284 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCC
Confidence 9987 88887432 234689999999885 677888888744445555556664 4553211 111221
Q ss_pred cceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007802 475 PVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 475 pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 526 (589)
+ .. .-=+..|..+-|=+|- ....--+.|...+++-|.....
T Consensus 285 ~----~~--pL~~~~nvilTPHia~-----~t~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 285 Q----GH--TLLRMENCICTPHIGY-----VERESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp S----CC--GGGGCTTEEECCSCTT-----CBHHHHHHHHHHHHHHHHHHHT
T ss_pred C----CC--hhhcCCCEEECCCCCC-----CCHHHHHHHHHHHHHHHHHHHc
Confidence 0 00 1124568888888742 1111224566667777776654
No 179
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=79.92 E-value=1.3 Score=44.85 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=65.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc---ccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL---IVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL---v~~~r~~~l~~~k~~fa~~~~~~~~L~e~V 405 (589)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ...... ++.+...+|..+-....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999887754 24310000136999997520 000000 12111112322211225688888
Q ss_pred hccCCcEEEeecCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 406 KAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
+. +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977765532 3556788888876 566888899996
No 180
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=79.80 E-value=0.87 Score=46.98 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=64.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCC-CCCHHHHHhc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP-IKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~-~~~L~e~V~~ 407 (589)
..||.|+|||..|..+|..|+.. |+- ..+.++|.+-=..++-.-+|.+. .+|....-. ..+-.++++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988653 552 58999997410000000013222 233211000 0112356665
Q ss_pred cCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007802 408 IKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 408 vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+ |- | -+++++.+.+++..-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 88877444433 31 1 267788888999999999999998
No 181
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.69 E-value=3 Score=41.98 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=27.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+..||.|+|+|..|..+|..+... |. +++++|++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 3557999999999999999988653 63 57777764
No 182
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=79.34 E-value=2.5 Score=42.31 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=28.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+...||.|+|.|..|.++|..|... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999988653 63 57777764
No 183
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.15 E-value=5.2 Score=39.47 Aligned_cols=106 Identities=11% Similarity=0.100 Sum_probs=62.8
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh----chhhhc-ccCCCCC
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----KKPWAH-EHAPIKS 400 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~----k~~fa~-~~~~~~~ 400 (589)
++..||+|.|| |-.|..+++.|++. |. .-+++.+|+...-.. ...+... ...+.. +-.+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888877653 52 246777777532111 1111111 111111 1122246
Q ss_pred HHHHHhccCCcEEEeecCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 007802 401 LLDAVKAIKPTMLMGTSGVGKTF----------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 401 L~e~V~~vkPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 444 (589)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999887754321 366888888776666888544
No 184
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=79.14 E-value=5.4 Score=40.81 Aligned_cols=191 Identities=13% Similarity=0.083 Sum_probs=111.6
Q ss_pred CCCceeccCC----CchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007802 296 SSHLVFNDDI----QGTASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (589)
Q Consensus 296 ~~~~~FnDDi----QGTaaV~lAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~ 355 (589)
..+++.|--- +..|=-+++.+|+..|- .+..|++.+|.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4566655211 34566678888888763 2567899999999999999999998854
Q ss_pred cCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHH
Q 007802 356 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAM 431 (589)
Q Consensus 356 ~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~M 431 (589)
.|+ +++.+|+..- ...... .+. ...+|.|+++. .|+++=.- ...+.|+++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 264 5777886421 111111 110 11478898885 88887431 12468899998888
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeCCCCccccccchhhhHHHHHhCCcccC
Q 007802 432 ASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVR 510 (589)
Q Consensus 432 a~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~It 510 (589)
. +..|+.=.|+-..--|-.-.+|++ .|+.-.|.=-=|++--. .+. .-=+..|..+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~~--pL~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQES--PLWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTC--GGGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCCC--hhhcCCCEEECCCCCc------ccH-H
Confidence 5 567888777644333333334443 56544332111111000 000 0124567888887762 222 2
Q ss_pred HHHHHHHHHHHHhccC
Q 007802 511 DEMLLAASEALAAQVT 526 (589)
Q Consensus 511 d~m~~aAA~aLA~~v~ 526 (589)
+.|...+++-|.....
T Consensus 286 ~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 286 AEAIDYISRTITQLEK 301 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677777777776654
No 185
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=79.04 E-value=4.7 Score=42.93 Aligned_cols=71 Identities=24% Similarity=0.374 Sum_probs=47.5
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~ 407 (589)
--|++|+|+ |-+|.|-++.+... |.. ..++..+|.+= + .+.. +| +.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~--~-~~g~-------~~-----------~~i~- 262 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE--T-SRGG-------PF-----------DEIP- 262 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH--H-TTCS-------CC-----------THHH-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc--c-ccCC-------ch-----------hhHh-
Confidence 568999999 99999999877542 541 12566666641 0 1100 01 2344
Q ss_pred cCCcEEEeecCC----CCCCCHHHHHHH
Q 007802 408 IKPTMLMGTSGV----GKTFTKEVVEAM 431 (589)
Q Consensus 408 vkPtvLIG~S~~----~g~Fteevv~~M 431 (589)
..|++||+--. |.++|+|.|+.|
T Consensus 263 -~aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 263 -QADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp -HSSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred -hCCEEEECcCcCCCCCcccCHHHHhcC
Confidence 38999998764 678999999998
No 186
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.99 E-value=3 Score=41.16 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988653 53 68888874
No 187
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.71 E-value=4.4 Score=44.06 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=61.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc--CCCCCHHHHHhc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~--~~~~~L~e~V~~ 407 (589)
.+|.|+|.|..|..+|..|... |. +++++|++ .+ .+....+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VS---KVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----TH---HHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5799999999999999988653 64 57888864 11 1111111111100 013678898875
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007802 408 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 447 (589)
Q Consensus 408 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 447 (589)
+ +|+++| ++-..+.-.+++++.+..+- +..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 488776 44444445677888777543 567888888844
No 188
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=78.66 E-value=13 Score=38.28 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=78.5
Q ss_pred CCceeccCC---CchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007802 297 SHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 355 (589)
Q Consensus 297 ~~~~FnDDi---QGTaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~ 355 (589)
.+++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 455555432 23444567778877663 3567999999999999999999998753
Q ss_pred cCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007802 356 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 430 (589)
Q Consensus 356 ~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~ 430 (589)
.|+ +++.+|+.. .+. .+.. .....+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----------~~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----------SPE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----------CHH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----------chh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 588888641 110 1111 1112479999886 89888542 1235788888888
Q ss_pred HHcCCCCcEEEecCCC
Q 007802 431 MASFNEKPVIFALSNP 446 (589)
Q Consensus 431 Ma~~~erPIIFaLSNP 446 (589)
|. +..++.=.|.-
T Consensus 245 mk---~gailIN~arg 257 (335)
T 2g76_A 245 CK---KGVRVVNCARG 257 (335)
T ss_dssp SC---TTEEEEECSCT
T ss_pred CC---CCcEEEECCCc
Confidence 85 56788877773
No 189
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.65 E-value=2 Score=46.51 Aligned_cols=105 Identities=13% Similarity=0.034 Sum_probs=57.1
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCc---EEEecCCCCCCC--------CCCHHHHhccccCcEEE-eeC
Q 007802 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKP---VIFALSNPTSQS--------ECTAEEAYTWSKGQAIF-ASG 470 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erP---IIFaLSNPt~~~--------E~t~eda~~wT~Graif-AsG 470 (589)
++-+.++|+.+|-..+.. +. +..|++..++| |..=.=||.+.. +-|.+++++.. +.++ +-|
T Consensus 151 ~l~~~~~~~aIlasnTSs--l~---i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~--~~l~~~lG 223 (460)
T 3k6j_A 151 NLENICKSTCIFGTNTSS--LD---LNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATA--FQACESIK 223 (460)
T ss_dssp HHHTTSCTTCEEEECCSS--SC---HHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSSCCHHHHHHH--HHHHHHTT
T ss_pred HHHhhCCCCCEEEecCCC--hh---HHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCCCCHHHHHHH--HHHHHHhC
Confidence 444557788777533321 33 34566666666 444445676431 22333443321 1111 122
Q ss_pred CCCCcceeCCeeeCCCCccccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007802 471 SPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASE 519 (589)
Q Consensus 471 SPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~ 519 (589)
-.||..+ ..||+.-|-+++|.+.=++.+....-++.+.+..|.+
T Consensus 224 --k~~v~v~---d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 224 --KLPVLVG---NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp --CEEEEES---SCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred --CEEEEEe---cccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 1344443 2689998999999988888777333377777766643
No 190
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=78.56 E-value=12 Score=37.96 Aligned_cols=122 Identities=16% Similarity=0.190 Sum_probs=76.9
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALE 351 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~ 351 (589)
..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 3455555432 23344477888877663 2457899999999999999999998753
Q ss_pred HHhccCCCHHhhcCeEEEEcc-cCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHH
Q 007802 352 MSKQTKAPIEEARKKIWLVDS-KGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKE 426 (589)
Q Consensus 352 ~~~~~G~s~eeA~~~i~~vD~-~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ftee 426 (589)
.|+ +++.+|+ .. . . ...+ .+ ......++.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G~-------~V~~~d~~~~----~--~--~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FDM-------DIDYFDTHRA----S--S--SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TTC-------EEEEECSSCC----C--H--HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CCC-------EEEEECCCCc----C--h--hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 253 5888887 41 0 0 0000 01 00112378898886 888874321 23578888
Q ss_pred HHHHHHcCCCCcEEEecCC
Q 007802 427 VVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 427 vv~~Ma~~~erPIIFaLSN 445 (589)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888774 5667777776
No 191
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=78.50 E-value=28 Score=35.95 Aligned_cols=190 Identities=16% Similarity=0.131 Sum_probs=110.0
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHHh------------------------C-CCCCCceEEEeCcChHHHHHHHH
Q 007802 296 SSHLVFNDDI---QGTASVVLAGILSALKLV------------------------G-GTLADQTFLFLGAGEAGTGIAEL 347 (589)
Q Consensus 296 ~~~~~FnDDi---QGTaaV~lAgll~Alr~~------------------------g-~~l~d~riv~~GAGsAg~GiA~l 347 (589)
..+.+.|--- +.+|=-+++.+|+..|-. | ..|.+.+|.|+|.|..|..+|+.
T Consensus 107 ~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~ 186 (347)
T 1mx3_A 107 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALR 186 (347)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHH
Confidence 3455555322 234445777777776621 2 47899999999999999999998
Q ss_pred HHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCC
Q 007802 348 IALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTF 423 (589)
Q Consensus 348 l~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~F 423 (589)
+.. .|+ +++.+|++- . +.. ...+ ......+|.|+++. .|+++=.- ...+++
T Consensus 187 l~~-----~G~-------~V~~~d~~~----~--~~~---~~~~--g~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 187 AKA-----FGF-------NVLFYDPYL----S--DGV---ERAL--GLQRVSTLQDLLFH--SDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp HHT-----TTC-------EEEEECTTS----C--TTH---HHHH--TCEECSSHHHHHHH--CSEEEECCCCCTTCTTSB
T ss_pred HHH-----CCC-------EEEEECCCc----c--hhh---Hhhc--CCeecCCHHHHHhc--CCEEEEcCCCCHHHHHHh
Confidence 754 264 588888641 1 001 1111 00112478898886 88887532 224678
Q ss_pred CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----eCCCCCcceeCCeeeCCCCccccccchhhh
Q 007802 424 TKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYNGKVFVPGQGNNAYIFPGLG 498 (589)
Q Consensus 424 teevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifA-----sGSPf~pv~~~G~~~~p~Q~NN~~iFPGig 498 (589)
+++.++.|. +..++.=.|+=..--|..-.+|++ +|+.-.| ..-|+++ .+.. -=..+|..+-|=++
T Consensus 242 ~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~~~~--L~~~~nvi~tPHia 311 (347)
T 1mx3_A 242 NDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---SQGP--LKDAPNLICTPHAA 311 (347)
T ss_dssp SHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---TSST--TTTCSSEEECSSCT
T ss_pred HHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---CCch--HHhCCCEEEEchHH
Confidence 888888884 566888888744323333344443 4554432 2223221 1111 12478999999876
Q ss_pred HHHHHhCCcccCHHHHHHHHHHHHhcc
Q 007802 499 LGLIISGAIRVRDEMLLAASEALAAQV 525 (589)
Q Consensus 499 lG~~~~~a~~Itd~m~~aAA~aLA~~v 525 (589)
- -.....+.|...+++-+.+..
T Consensus 312 ~-----~t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 312 W-----YSEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp T-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHH
Confidence 3 222233455666666666554
No 192
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=78.33 E-value=6.5 Score=39.57 Aligned_cols=99 Identities=10% Similarity=0.110 Sum_probs=59.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccC-CCCCHHHHHhc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA-PIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~-~~~~L~e~V~~ 407 (589)
..||.|+|+|..|..+|..|..+ |.. ...+++++|+.- ++ ..+.. +....- -..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~~----~~-~~~~~----l~~~G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPDM----DL-ATVSA----LRKMGVKLTPHNKETVQH 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSCT----TS-HHHHH----HHHHTCEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCCc----cH-HHHHH----HHHcCCEEeCChHHHhcc
Confidence 45899999999999999988653 531 114688888641 10 00111 111111 11467788875
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007802 408 IKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (589)
Q Consensus 408 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 448 (589)
.|++| ++..+ -..+++++.+.... +..+|.-+||..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77766 44333 46777888776543 4568888888774
No 193
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.04 E-value=2.6 Score=41.40 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999988653 5 367777874
No 194
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=77.88 E-value=2.5 Score=44.86 Aligned_cols=97 Identities=18% Similarity=0.322 Sum_probs=50.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHH-hhcCeEEEEcccC-------cccCCcc--cCCchhchhhhcccCCCC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIE-EARKKIWLVDSKG-------LIVSSRK--ESLQHFKKPWAHEHAPIK 399 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~e-eA~~~i~~vD~~G-------Lv~~~r~--~~l~~~k~~fa~~~~~~~ 399 (589)
.||.|+|||+=|+.+|..|.+.-.. ...- +-.=++|..|..= .+...+. ..|+..+.+ ..-.-..
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999875321 1000 0012467655430 0122221 112222211 0000114
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC
Q 007802 400 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN 435 (589)
Q Consensus 400 ~L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~ 435 (589)
+|.|+++. .|++| + ++|-.|-+++++.+..+-
T Consensus 110 dl~~al~~--ad~ii-~-avPs~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIV-F-NIPHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEE-E-CSCGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEE-E-ECChhhhHHHHHHhcccc
Confidence 78888876 66654 1 223356777777776543
No 195
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.61 E-value=4.5 Score=40.47 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=28.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+-.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34457999999999999999988763 63 68888874
No 196
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=77.51 E-value=0.96 Score=48.64 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=43.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-cCCCCCHHH
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLD 403 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~~L~e 403 (589)
..|.+.|++|+|.+.-..++++.|.+ .|+. -+.+.-.. ..+.+... +...- ..+...|++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~------vv~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAH------TVAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCE------EEEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCE------EEEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 46789999999999999999998843 4873 22222111 11111110 00000 011124777
Q ss_pred HHhccCCcEEEeecC
Q 007802 404 AVKAIKPTMLMGTSG 418 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~ 418 (589)
.++..+||.+||-|-
T Consensus 370 ~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHTCSEEEECTT
T ss_pred HHHhcCCCEEEEChh
Confidence 888999999999554
No 197
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=77.44 E-value=3.3 Score=41.09 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 253 57888864
No 198
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=76.97 E-value=11 Score=37.74 Aligned_cols=33 Identities=27% Similarity=0.309 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 5899999999999999998764 53 478888884
No 199
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.85 E-value=3.7 Score=37.33 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=28.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988542 04 358888874
No 200
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=76.67 E-value=3 Score=42.72 Aligned_cols=110 Identities=7% Similarity=0.124 Sum_probs=60.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCC-cccCCchhch--hhhcc------cCCCCC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS-RKESLQHFKK--PWAHE------HAPIKS 400 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~-r~~~l~~~k~--~fa~~------~~~~~~ 400 (589)
.||.|+|+|..|..+|..|..+-... . .-..+++++|+..-+... +.+.+..... .|-.. .....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 47999999999999999987652110 0 000468888875321000 0000111000 01000 001146
Q ss_pred HHHHHhccCCcEEEeecCCCCCCCHHHHHHHHc----CC-CCcEEEecCCCCC
Q 007802 401 LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMAS----FN-EKPVIFALSNPTS 448 (589)
Q Consensus 401 L~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~~-erPIIFaLSNPt~ 448 (589)
+.|+++. .|++| ++..+ -..+++++.+.. +. +..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7788875 78776 33322 467888888875 33 4568888998654
No 201
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=76.58 E-value=7.1 Score=40.08 Aligned_cols=194 Identities=15% Similarity=0.130 Sum_probs=108.9
Q ss_pred CCceeccC-C--CchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007802 297 SHLVFNDD-I--QGTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 353 (589)
Q Consensus 297 ~~~~FnDD-i--QGTaaV~lAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~ 353 (589)
.+.+.|-- . +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~--- 166 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG--- 166 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT---
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 45555532 1 23455677777776652 2456899999999999999999998743
Q ss_pred hccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHH
Q 007802 354 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVE 429 (589)
Q Consensus 354 ~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~ 429 (589)
.|+ +++.+|+... . ....+ .+ .....+|.|+++. .|+++=.- ...+.++++.++
T Consensus 167 --~G~-------~V~~~d~~~~---~----~~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 224 (330)
T 4e5n_A 167 --WGA-------TLQYHEAKAL---D----TQTEQ-RL---GLRQVACSELFAS--SDFILLALPLNADTLHLVNAELLA 224 (330)
T ss_dssp --SCC-------EEEEECSSCC---C----HHHHH-HH---TEEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CCC-------EEEEECCCCC---c----HhHHH-hc---CceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHHh
Confidence 364 5888887531 0 11111 11 0112479999986 88887542 234689999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeCC-------CCccccccchhhhHHHH
Q 007802 430 AMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVP-------GQGNNAYIFPGLGLGLI 502 (589)
Q Consensus 430 ~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv~~~G~~~~p-------~Q~NN~~iFPGiglG~~ 502 (589)
.|. +..+|.=.|+-..--|-.-.+|++ +|+.-.|.=-=|++-.+ .....| =+..|+.+-|=+|-.
T Consensus 225 ~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~-- 296 (330)
T 4e5n_A 225 LVR---PGALLVNPCRGSVVDEAAVLAALE--RGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSA-- 296 (330)
T ss_dssp TSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTC--
T ss_pred hCC---CCcEEEECCCCchhCHHHHHHHHH--hCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCC--
Confidence 885 677888888743223333334443 56554332111111100 000012 134577777776532
Q ss_pred HhCCcccCHHHHHHHHHHHHhccC
Q 007802 503 ISGAIRVRDEMLLAASEALAAQVT 526 (589)
Q Consensus 503 ~~~a~~Itd~m~~aAA~aLA~~v~ 526 (589)
...-.+.|...+++-|.....
T Consensus 297 ---t~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 297 ---VRAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHT
T ss_pred ---hHHHHHHHHHHHHHHHHHHHc
Confidence 122234566666666666654
No 202
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=76.51 E-value=3.5 Score=40.47 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998764 5 357888874
No 203
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=76.42 E-value=16 Score=37.61 Aligned_cols=94 Identities=18% Similarity=0.348 Sum_probs=49.9
Q ss_pred HHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc
Q 007802 315 GILSALKLVG-GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 393 (589)
Q Consensus 315 gll~Alr~~g-~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~ 393 (589)
..+.|+.... .--.+++|+|+|||..|...+.+... .|. ++++.+|+. +.+..+++
T Consensus 199 ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~~ 255 (404)
T 3ip1_A 199 VAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLAK 255 (404)
T ss_dssp HHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHHH
Confidence 3344444333 34467899999999777655544432 364 578877753 12223333
Q ss_pred c-------cCCCCCHHHHHhc----cCCcEEEeecCCCCCCCHHHHHHH
Q 007802 394 E-------HAPIKSLLDAVKA----IKPTMLMGTSGVGKTFTKEVVEAM 431 (589)
Q Consensus 394 ~-------~~~~~~L~e~V~~----vkPtvLIG~S~~~g~Fteevv~~M 431 (589)
. .....++.+.|+. -+.|++|-+++.+....+..++.+
T Consensus 256 ~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 256 ELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred HcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 1 0111355555544 368888877764321223344444
No 204
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=75.89 E-value=1.9 Score=44.26 Aligned_cols=88 Identities=20% Similarity=0.315 Sum_probs=53.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----ccCCCCCHHHHHh
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----EHAPIKSLLDAVK 406 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----~~~~~~~L~e~V~ 406 (589)
||+++|||-.|--+|+.|.+ ..++.+.|... .++...+ +++. +..+..+|.+.++
T Consensus 18 kilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~~ 76 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVMK 76 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHHh
Confidence 79999999988777776521 13577777641 1122111 2222 1222346888887
Q ss_pred ccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
. .|++|- +.|+-|..+++++-.+... . ++-+|-
T Consensus 77 ~--~DvVi~--~~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 77 E--FELVIG--ALPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp T--CSEEEE--CCCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred C--CCEEEE--ecCCcccchHHHHHHhcCc-c-eEeeec
Confidence 5 788874 4566688899888766443 2 555664
No 205
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=75.45 E-value=3.1 Score=46.97 Aligned_cols=37 Identities=27% Similarity=0.379 Sum_probs=33.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.||+++|+|..|+-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 47789999999999999999999875 76 789999987
No 206
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.24 E-value=4.4 Score=37.89 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=54.9
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch-hhhcccCCCCCHH
Q 007802 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAHEHAPIKSLL 402 (589)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~-~fa~~~~~~~~L~ 402 (589)
.+|++.+|+|.|| |-.|..+++.|++ .| .++++++++. ++.+.+..... .+..-+-. .++.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~-~~~~ 79 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE-EDFS 79 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT-SCCG
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH-HHHH
Confidence 5688999999998 7788888877754 36 3688888751 11011111111 11111111 4566
Q ss_pred HHHhccCCcEEEeecCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 80 ~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 80 HAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 7776 59999977765421 0345666666555455666444
No 207
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.14 E-value=2.8 Score=41.08 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998764 253 57888764
No 208
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=75.02 E-value=4.2 Score=38.99 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=45.4
Q ss_pred CCCCceEEEeCc-Ch-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------
Q 007802 326 TLADQTFLFLGA-GE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH---------- 393 (589)
Q Consensus 326 ~l~d~riv~~GA-Gs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~---------- 393 (589)
.++++++||.|| |+ .|..+|+.+++ .| -+++++|++- +.+...+..+..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 77778877754 36 3588888751 112222222211
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 394 -EHAPIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 394 -~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
|-.+..++.++++.+ +.|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111112455666655 799999777653
No 209
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=74.79 E-value=1.7 Score=43.31 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=59.3
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc---hh---chhhhc-ccCC
Q 007802 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ---HF---KKPWAH-EHAP 397 (589)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~---~~---k~~fa~-~~~~ 397 (589)
+++..+|+|.|| |-.|-.|++.|++ .| .+++.++++.- .....+. .. ...+.. +-.+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 345679999999 8888888887754 25 35888877530 0000010 00 001111 1112
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 007802 398 IKSLLDAVKAIKPTMLMGTSGVGKT-FTKEVVEAMASFN-EKPVIF 441 (589)
Q Consensus 398 ~~~L~e~V~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~-erPIIF 441 (589)
..+|.++++..++|++|=+.+..+. -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888886679999988775432 3788999988766 445554
No 210
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=74.74 E-value=1.8 Score=46.42 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=33.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345788999999999999999999874 76 789999987
No 211
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=74.68 E-value=4.5 Score=39.39 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=24.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD 371 (589)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3899999999999999988642 53 577776
No 212
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=74.49 E-value=2.4 Score=44.07 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=64.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh--c-ccCCCCCHHHH
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA--H-EHAPIKSLLDA 404 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa--~-~~~~~~~L~e~ 404 (589)
++.||+|+|+|.+|-.+|+.|.+. .++.+.|++ .++ +......+. . +..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 467999999999999998877431 357788774 111 111111111 0 11122468888
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcc
Q 007802 405 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPV 476 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGSPf~pv 476 (589)
++. +|++|-+ + |..+..+++++-.+. .=.++-+|.-....+.--++|-+ .|. .+..|+-|+|-
T Consensus 75 l~~--~DvVIn~-~-P~~~~~~v~~a~l~~--G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGA-L-PGFLGFKSIKAAIKS--KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEEC-C-CHHHHHHHHHHHHHT--TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEEC-C-ChhhhHHHHHHHHHh--CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 8999976 3 323566776654432 22356677622112122334433 453 33355546654
No 213
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=73.74 E-value=2 Score=41.52 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=56.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHh
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVK 406 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~ 406 (589)
+..||+|.|||-.|..+++.|++ .| .+++.++++. ..+.+. ..+.+ +-.+..++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 34689999999888888887765 25 3577777641 112111 11111 1112234555565
Q ss_pred ccCCcEEEeecCCCC-----------CCCHHHHHHHHcCCCCcEEEecC
Q 007802 407 AIKPTMLMGTSGVGK-----------TFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g-----------~Fteevv~~Ma~~~erPIIFaLS 444 (589)
. ++|++|=+.+... ..+..+++++.+..-+-+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999996654321 02667888887665567887544
No 214
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=73.69 E-value=8.3 Score=39.79 Aligned_cols=84 Identities=21% Similarity=0.348 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch
Q 007802 308 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 386 (589)
Q Consensus 308 TaaV~lAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~ 386 (589)
-.-+|-.|++--|+-.+.+|++.++|++|.+. .|.-+|-||.. .|. .+.++.++
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 34577889999999999999999999999654 57777777654 243 35555432
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHH
Q 007802 387 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVE 429 (589)
Q Consensus 387 ~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv~ 429 (589)
.++|.+.+++ +|+||...+.++.++.++||
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1358888886 99999999999999999887
No 215
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.50 E-value=1.4 Score=45.57 Aligned_cols=108 Identities=17% Similarity=0.230 Sum_probs=65.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc--CCCCCHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLD 403 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~--~~~~~L~e 403 (589)
+....||.++|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 45567999999999999999887642 54 257999997510001000012211 1232210 0113443
Q ss_pred HHhccCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007802 404 AVKAIKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 447 (589)
+++. .|++|=+.+.+ |- | -+++.+.|++++..-+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 4665 88887444433 21 1 257888899999999999999998
No 216
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=73.11 E-value=3.7 Score=41.82 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=63.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCC--CCHHHHHhcc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~--~~L~e~V~~v 408 (589)
||.|+|||..|..+|-+|... |+ -..+.|+|.+-=..++-.-+|.+- ..|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999998887652 55 256999997521111111113221 1222111111 122245665
Q ss_pred CCcEEEeecCCCCC--CC------------HHHHHHHHcCCCCcEEEecCCCC
Q 007802 409 KPTMLMGTSGVGKT--FT------------KEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 409 kPtvLIG~S~~~g~--Ft------------eevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|++|=+.+.+.- -| +++++.+++++...||.-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8988866665421 12 46788889999999999999997
No 217
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=72.81 E-value=2.4 Score=44.07 Aligned_cols=107 Identities=15% Similarity=0.296 Sum_probs=64.2
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccC-CCCCHHHH
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHA-PIKSLLDA 404 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~-~~~~L~e~ 404 (589)
+...||.|+|| |..|..+|-.++. .|+. ..+.++|.+-=..++-.-+|.+. .|....- -..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 35679999998 9999999865543 3652 46999997411001000013222 1211000 01478889
Q ss_pred HhccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 007802 405 VKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPV-IFALSNPT 447 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 447 (589)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 986 89888444433 21 23467778888998885 88899997
No 218
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=72.78 E-value=7.6 Score=38.32 Aligned_cols=104 Identities=15% Similarity=0.143 Sum_probs=61.2
Q ss_pred CCCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcc---cCCchhchhhhc-ccCCC
Q 007802 324 GGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK---ESLQHFKKPWAH-EHAPI 398 (589)
Q Consensus 324 g~~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~---~~l~~~k~~fa~-~~~~~ 398 (589)
.+++++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .... ..+. ...+.. +-.+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~ 77 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDA 77 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCH
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCH
Confidence 35678889999998 7777777766643 25 3688888741 1100 1110 111111 11122
Q ss_pred CCHHHHHhccCCcEEEeecCCCCC-C------------CHHHHHHHHcCCCCcEEEecC
Q 007802 399 KSLLDAVKAIKPTMLMGTSGVGKT-F------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 399 ~~L~e~V~~vkPtvLIG~S~~~g~-F------------teevv~~Ma~~~erPIIFaLS 444 (589)
.++.++++.+++|++|=+.+.... - +..+++++.+..-+.|||.=|
T Consensus 78 ~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 78 GLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 357777876679999988775532 0 345677777665567888644
No 219
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=72.27 E-value=5.7 Score=40.41 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=26.7
Q ss_pred HHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007802 402 LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 445 (589)
...++..|||++||..+-. --.....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 4568889999999986633 222233455567899975555
No 220
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=72.15 E-value=3.4 Score=38.31 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=53.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh-----chhhhc-ccCCCCCHH
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-----KKPWAH-EHAPIKSLL 402 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~-----k~~fa~-~~~~~~~L~ 402 (589)
++|+|.|| |-.|..+++.|++. .| -++++++++. + ..+... +..+.. +-.+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 45999996 77787787777621 36 3688887751 1 012111 001111 111223577
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEe
Q 007802 403 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 442 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFa 442 (589)
++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 78874 899997776433226778888876554456654
No 221
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=71.79 E-value=2 Score=37.74 Aligned_cols=32 Identities=16% Similarity=0.366 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 478999999999999998865 25 368888885
No 222
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=71.53 E-value=4.7 Score=40.02 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|.++|..+.. .|. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998764 253 57788874
No 223
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=71.51 E-value=6.8 Score=38.06 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=55.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. . .+...++.-... ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~----~---~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP----E---SISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH----H---HHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH----H---HHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999998864 2641 3688888741 1 111111000000 002356666662 3
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007802 410 PTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNPT 447 (589)
Q Consensus 410 PtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 447 (589)
+|++| ++..+ -.++++++.+..+ .+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 78877 44433 2566777766543 3455777777744
No 224
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=71.41 E-value=3.3 Score=40.51 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999988642 52 57888864
No 225
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=71.24 E-value=7.3 Score=37.36 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=23.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
||.|+|+|..|..+|..|... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999988652 53 5776665
No 226
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=70.89 E-value=3.6 Score=40.96 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=25.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-||+|+|||.||+-.|-.|.+ .|+ ++.++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 389999999999999988865 375 46677754
No 227
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=70.53 E-value=3.6 Score=40.74 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=28.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998854 253 2799999874
No 228
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=70.11 E-value=1.7 Score=45.07 Aligned_cols=117 Identities=12% Similarity=0.098 Sum_probs=68.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc--CCCCCHHHHH
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLDAV 405 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~--~~~~~L~e~V 405 (589)
...||.|+|||..|.++|-.++.. |+ -..+.++|.+-=..++-.-+|.+. ..|.... ....++.+ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988653 65 247999997410000000012221 1232210 00124443 5
Q ss_pred hccCCcEEEeecCC---CCC-----------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 007802 406 KAIKPTMLMGTSGV---GKT-----------FTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWS 461 (589)
Q Consensus 406 ~~vkPtvLIG~S~~---~g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT 461 (589)
+. .|++|=+.+. +|- .-+++++.+.+++..-+|+-.|||.. ....-+++.+
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHh
Confidence 54 8988833333 331 12567788889999999999999972 3334444443
No 229
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=69.54 E-value=14 Score=36.50 Aligned_cols=104 Identities=19% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh-chhhhc-ccCCCCCHH
Q 007802 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-KKPWAH-EHAPIKSLL 402 (589)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~-k~~fa~-~~~~~~~L~ 402 (589)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|++. ....+.+... +..+.. +-.+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355679999995 7777777776654 25 4688888752 1111112110 111111 111223577
Q ss_pred HHHhccCCcEEEeecCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78887789999988775432 0345777777665567888544
No 230
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=72.48 E-value=0.95 Score=43.02 Aligned_cols=92 Identities=13% Similarity=0.109 Sum_probs=53.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHh
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVK 406 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~ 406 (589)
+.+.||.|+|+|..|..+|..+... |. +++++|++-- . +.+ +.......++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 5567899999999999999988653 42 4666766421 1 111 111111125666665
Q ss_pred ccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 407 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
. .|++| ++..+. -++++++ .+...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 67666 333332 3455552 33233456888888876
No 231
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.43 E-value=9.4 Score=37.60 Aligned_cols=97 Identities=14% Similarity=0.139 Sum_probs=57.6
Q ss_pred CCCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCH
Q 007802 324 GGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSL 401 (589)
Q Consensus 324 g~~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L 401 (589)
.++++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .. ..+. +.. +-.+..++
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~-----~~~~Dl~d~~~~ 71 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGE-----EVVGSLEDGQAL 71 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCS-----EEESCTTCHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCcc-----EEecCcCCHHHH
Confidence 35678899999998 8888888887764 36 3577777752 10 1111 111 11222457
Q ss_pred HHHHhccCCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007802 402 LDAVKAIKPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 444 (589)
.++++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 72 ~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 72 SDAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 78887 599999877654211 345888888877778898655
No 232
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=68.68 E-value=4.9 Score=40.60 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988653 51 368888876
No 233
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=68.63 E-value=13 Score=37.64 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-.||.|+|+|..|..+|..+... |. ..+|+++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECC
Confidence 37999999999999999988653 65 1478888875
No 234
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=68.63 E-value=8.6 Score=37.48 Aligned_cols=103 Identities=14% Similarity=0.217 Sum_probs=57.2
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh----chhhhc-ccCCCCCH
Q 007802 328 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----KKPWAH-EHAPIKSL 401 (589)
Q Consensus 328 ~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~----k~~fa~-~~~~~~~L 401 (589)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++.--... ..+... +..+.. +-.+..++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHH
Confidence 4678999998 7777777777654 25 368888875210000 001000 011111 11122357
Q ss_pred HHHHhccCCcEEEeecCCCCC------C----------CHHHHHHHHcCCC-CcEEEecC
Q 007802 402 LDAVKAIKPTMLMGTSGVGKT------F----------TKEVVEAMASFNE-KPVIFALS 444 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g~------F----------teevv~~Ma~~~e-rPIIFaLS 444 (589)
.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888889999988875421 0 3445566555443 67888644
No 235
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=68.53 E-value=3.5 Score=46.91 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=31.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++.||+++|+|..|+-+|+.|+.+ |+ ++|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 788999999999999999988764 86 789999987
No 236
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=68.52 E-value=3.7 Score=42.70 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+||||+|+|.||+..|..|.+. +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888875
No 237
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=68.03 E-value=4.6 Score=38.35 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999998865 25 368999974
No 238
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=67.56 E-value=2.3 Score=43.98 Aligned_cols=110 Identities=16% Similarity=0.127 Sum_probs=66.7
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC---cccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007802 330 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG---LIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (589)
Q Consensus 330 ~riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G---Lv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V 405 (589)
.||+|.| ||..|..+|-+|+. .|+-.++-.-.+.|+|.+. .+.-... +|.+.-.+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999999888754 2441100011389999852 1111111 13322223333222224688888
Q ss_pred hccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 007802 406 KAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPV-IFALSNPT 447 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 447 (589)
+. .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 86 89888555443 21 24678888999888774 99999997
No 239
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=67.53 E-value=4.7 Score=41.33 Aligned_cols=37 Identities=32% Similarity=0.480 Sum_probs=29.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 589999999999999998865 3642 379999987633
No 240
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=67.52 E-value=6.7 Score=36.13 Aligned_cols=95 Identities=7% Similarity=0.115 Sum_probs=52.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~ 407 (589)
.||+|.|| |-.|..+++.|++ .| .+++.++++. ++...+.. ...+.+ +-.+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 6666666666543 25 4688888862 11111211 111111 21222457788874
Q ss_pred cCCcEEEeecCCCC----------CCCHHHHHHHHcCCCCcEEEec
Q 007802 408 IKPTMLMGTSGVGK----------TFTKEVVEAMASFNEKPVIFAL 443 (589)
Q Consensus 408 vkPtvLIG~S~~~g----------~Fteevv~~Ma~~~erPIIFaL 443 (589)
+|++|=+.+... ..+..++++|.+..-+-+||.=
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 899997765431 0245577777766555566643
No 241
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=67.36 E-value=14 Score=36.67 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=25.6
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998854 353 58888764
No 242
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=67.30 E-value=4 Score=39.69 Aligned_cols=34 Identities=12% Similarity=0.326 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998864 363 589999874
No 243
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=66.57 E-value=4.3 Score=39.33 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=23.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
||.|+|+|..|..+|..+.. |. +++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999987742 42 47778764
No 244
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=66.38 E-value=6.3 Score=32.25 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=50.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch---hhhc-ccCCCCCHHH
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK---PWAH-EHAPIKSLLD 403 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~---~fa~-~~~~~~~L~e 403 (589)
...+|+|+|+|..|..+++.+.. .|. .+++++|++. .+ +...+. .+.. +.....++.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~ 65 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAK 65 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHH
Confidence 35689999999999999888754 252 4688888741 11 111110 1100 1111134666
Q ss_pred HHhccCCcEEEeecCCCCCCCHHHHHHHHcC
Q 007802 404 AVKAIKPTMLMGTSGVGKTFTKEVVEAMASF 434 (589)
Q Consensus 404 ~V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~ 434 (589)
+++ ++|++|=+. |..++..+++.+.+.
T Consensus 66 ~~~--~~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 66 ALG--GFDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp HTT--TCSEEEECS--CGGGHHHHHHHHHHT
T ss_pred HHc--CCCEEEECC--CchhhHHHHHHHHHh
Confidence 665 589988655 334677777776653
No 245
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=66.37 E-value=6.4 Score=33.25 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=25.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999988754 25 468888874
No 246
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=66.29 E-value=5.2 Score=38.39 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|||+|||.||+..|..+.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999988865 253 58999997
No 247
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=66.04 E-value=20 Score=34.79 Aligned_cols=79 Identities=15% Similarity=0.203 Sum_probs=43.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (589)
..+++++++||-||++ ||...|+..+.+ +|. +++++|++.- .+......+.-|-.+..++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4678999999999864 444455555554 363 5888876521 111111111112222234555
Q ss_pred HHhcc-----CCcEEEeecCCC
Q 007802 404 AVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 404 ~V~~v-----kPtvLIG~S~~~ 420 (589)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66555 799999776653
No 248
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=65.58 E-value=5.6 Score=40.07 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=28.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+.+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988765 363 6888887643
No 249
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=65.37 E-value=6 Score=34.19 Aligned_cols=34 Identities=24% Similarity=0.489 Sum_probs=26.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+..+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 35689999999999999998865 25 358888874
No 250
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=65.34 E-value=25 Score=35.01 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=61.2
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch-hchhhhc-ccC-CCCCH
Q 007802 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAH-EHA-PIKSL 401 (589)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~-~k~~fa~-~~~-~~~~L 401 (589)
+++..||+|.|| |-.|..+++.|++. .| .+++.+|+.. ++...+.. ....+.+ +-. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 467789999995 88888888877652 13 4688888752 11111111 1112221 111 22357
Q ss_pred HHHHhccCCcEEEeecCCCC----------------CCCHHHHHHHHcCCCCcEEEecC
Q 007802 402 LDAVKAIKPTMLMGTSGVGK----------------TFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 402 ~e~V~~vkPtvLIG~S~~~g----------------~Fteevv~~Ma~~~erPIIFaLS 444 (589)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778874 999997666432 23567899988877 78888655
No 251
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=65.27 E-value=5.4 Score=38.93 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|+|+|||.||+..|..+.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 25 3689999864
No 252
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=65.11 E-value=5.6 Score=38.40 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|||+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988754 253 68899986
No 253
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=64.99 E-value=5.7 Score=41.01 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 4458999999999999999881 123 579999887543
No 254
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=64.91 E-value=18 Score=38.07 Aligned_cols=111 Identities=9% Similarity=0.109 Sum_probs=60.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V 405 (589)
.++.+||+|+|.|.+|++.|+.+.+ .|. ++...|++-..... ..|. .-.++-. .... .+.+
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~---g~~~-~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHT---GSLN-DEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEE---SSCC-HHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEE---CCCc-HHHh
Confidence 3677899999999999999866643 373 57788886321100 1121 1111100 0112 5667
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCC
Q 007802 406 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGS 471 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~wT~GraifAsGS 471 (589)
+ .++.+|=-++.+. -.+++..+.. ...|++ + . .|-++...+.+.|-.|||
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~---~----~----~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV---G----D----IELFCREAQAPIVAITGS 112 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE---C----H----HHHHHHHCCSCEEEEECS
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE---E----H----HHHHHHhcCCCEEEEECC
Confidence 6 4787775445442 3566665443 234443 1 1 223334456778888886
No 255
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=64.45 E-value=6 Score=37.94 Aligned_cols=90 Identities=12% Similarity=0.140 Sum_probs=53.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
.||.|+|+|..|..+|..+.. .| .+++++|++ . +.+....+.| ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 389999999999999887643 24 467888764 1 1121111111 11123578888874
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 410 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 410 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
+|++| ++..+ ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi-~~v~~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVI-LGIKP-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEE-ECSCG-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEE-EEeCc-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 88877 33333 35567777654 334666665533
No 256
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=64.44 E-value=6.1 Score=41.24 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=31.4
Q ss_pred HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 322 LVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 322 ~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444567799999999999999988865 25 36888887644
No 257
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=64.22 E-value=16 Score=35.47 Aligned_cols=93 Identities=12% Similarity=0.200 Sum_probs=57.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~ 407 (589)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+... +. ...+.. +-. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888887765 25 368888886 12111 21 111211 212 245667777
Q ss_pred cCCcEEEeecCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 408 IKPTMLMGTSGVGKT------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++|++|=+.+..+. -+..+++++.+..-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988775432 1477888888776666888544
No 258
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=64.19 E-value=5.8 Score=40.75 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=29.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+..+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 45789999999999999998865 3642 46999988643
No 259
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=63.96 E-value=12 Score=36.43 Aligned_cols=79 Identities=10% Similarity=0.127 Sum_probs=43.9
Q ss_pred CCCCceEEEeCcC-h--HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc------ccC
Q 007802 326 TLADQTFLFLGAG-E--AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------EHA 396 (589)
Q Consensus 326 ~l~d~riv~~GAG-s--Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~------~~~ 396 (589)
.+++.++||.||. . .|..||+.+++ .| -+++++|++-+ . +.+...+..+.+ |-.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999974 3 55556665543 36 35888888641 0 112221111111 111
Q ss_pred CCCCHHHHHhcc-----CCcEEEeecCCCC
Q 007802 397 PIKSLLDAVKAI-----KPTMLMGTSGVGK 421 (589)
Q Consensus 397 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 421 (589)
+..++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 123455556554 7999998777653
No 260
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=63.88 E-value=60 Score=33.24 Aligned_cols=111 Identities=16% Similarity=0.154 Sum_probs=71.3
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 403 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e 403 (589)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999988543 64 46777753 11 1 111111 12257999
Q ss_pred HHhccCCcEEEee----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc--ccCcEEEe
Q 007802 404 AVKAIKPTMLMGT----SGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTW--SKGQAIFA 468 (589)
Q Consensus 404 ~V~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~w--T~GraifA 468 (589)
.++. .|+++=. ....+.|+++.++.|. +..++.=.|. -++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9987 8888743 1224799999999995 5667665544 45544444321 35665433
No 261
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=63.80 E-value=5.7 Score=39.12 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=24.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988865 375 46777764
No 262
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=63.57 E-value=9.8 Score=37.03 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=25.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 689999999999999988642 53 57888874
No 263
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=63.42 E-value=10 Score=36.14 Aligned_cols=93 Identities=13% Similarity=0.175 Sum_probs=55.8
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
.++..+|+|.|| |-.|..+++.|.+ .|.. ..... ..+...+. +-.+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~---~~~~~--------------~~~~~~~~----D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGL---PGEDW--------------VFVSSKDA----DLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCC---TTCEE--------------EECCTTTC----CTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCc---ccccc--------------cccCceec----ccCCHHHHHHH
Confidence 467789999996 8888888777754 3530 00000 00110000 11112357888
Q ss_pred HhccCCcEEEeecCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 405 VKAIKPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888899999988776431 1235788887776667888544
No 264
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.41 E-value=8 Score=39.47 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|||+|||.||+..|..|.+... .| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999998876221 13 4688888664
No 265
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=63.41 E-value=33 Score=37.32 Aligned_cols=121 Identities=21% Similarity=0.162 Sum_probs=76.6
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007802 296 SSHLVFNDDIQ---GTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 354 (589)
Q Consensus 296 ~~~~~FnDDiQ---GTaaV~lAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~ 354 (589)
..+.+.|---- .+|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 34555554322 3445578888887653 2567999999999999999999998754
Q ss_pred ccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007802 355 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 430 (589)
Q Consensus 355 ~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Fteevv~~ 430 (589)
.|+ +++.+|+.- .+ ... ....-...++.|+++. .|+++=+- ...+.++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~----~~a----~~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP----ARA----AQLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH----HHH----HHHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch----hHH----HhcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 254 588888742 11 000 0101111379999986 88887442 2235777777766
Q ss_pred HHcCCCCcEEEecCC
Q 007802 431 MASFNEKPVIFALSN 445 (589)
Q Consensus 431 Ma~~~erPIIFaLSN 445 (589)
|. +..+|.=.|.
T Consensus 222 ~k---~g~ilin~ar 233 (529)
T 1ygy_A 222 TK---PGVIIVNAAR 233 (529)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCCEEEECCC
Confidence 63 5668887773
No 266
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=63.39 E-value=6.9 Score=34.94 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-+++|+|+|.+|+-.|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999887652 5 468888876
No 267
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=63.07 E-value=10 Score=38.69 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=52.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-cCCCCCHHHHHh
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVK 406 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~~~~~~L~e~V~ 406 (589)
+..+|.|+|+|..|..+|..+.. .|. +++++|++. .+ . ...++. .-...++.|+++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~~----~~------~-~~~a~~~G~~~~~~~e~~~ 71 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRSG----SA------T-VAKAEAHGLKVADVKTAVA 71 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCTT----CH------H-HHHHHHTTCEEECHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECCh----HH------H-HHHHHHCCCEEccHHHHHh
Confidence 45689999999999999988765 264 477777642 10 0 011111 001127888887
Q ss_pred ccCCcEEEeecCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 007802 407 AIKPTMLMGTSGVGKTFTKEVVE-AMASFN-EKPVIF 441 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~Fteevv~-~Ma~~~-erPIIF 441 (589)
. +|++| ++..+.. .+++++ .+..+. +..+|.
T Consensus 72 ~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 72 A--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp T--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred c--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 5 88877 5554433 378887 766543 234444
No 268
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=63.07 E-value=7.6 Score=37.30 Aligned_cols=86 Identities=13% Similarity=0.245 Sum_probs=54.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-... .++. +..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~---~D~~-----------d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC---GDFS-----------NPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC---CCTT-----------CHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc---ccCC-----------CHHHHHHHHHhcC
Confidence 7899997 877777777664 2 4 46888877531110 0111 1135777888778
Q ss_pred CcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 410 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 410 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
+|++|=+.+.... .+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988875431 14567777766544 5887654
No 269
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=62.46 E-value=5.1 Score=38.81 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|||+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4689999999999999998865 264 58889884
No 270
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=62.40 E-value=8.6 Score=39.31 Aligned_cols=103 Identities=22% Similarity=0.292 Sum_probs=64.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCC--CCCHHHHHhc
Q 007802 331 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP--IKSLLDAVKA 407 (589)
Q Consensus 331 riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~--~~~L~e~V~~ 407 (589)
||.|+| +|..|..+|-+|... .++ ...+.++|.+-. ..+..-+|.+. ++-..-.. ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998877542 133 257999999741 11111012211 11000000 0246678876
Q ss_pred cCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007802 408 IKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 447 (589)
Q Consensus 408 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 447 (589)
.|+.|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 89888665544 21 1256777888999999999999998
No 271
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=62.08 E-value=4.1 Score=44.81 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=33.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 357789999999999999999999764 86 799999987
No 272
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=61.75 E-value=7.5 Score=40.05 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=29.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999998865 3642 469999886543
No 273
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=61.71 E-value=7.2 Score=38.13 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988865 364 68999987
No 274
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=61.68 E-value=22 Score=36.31 Aligned_cols=104 Identities=22% Similarity=0.295 Sum_probs=57.8
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccC
Q 007802 304 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 383 (589)
Q Consensus 304 DiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~ 383 (589)
+.++.....++..+.+++..+.+ .+++|+|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34554444566666777655543 57899999998777655544322 364 578877753
Q ss_pred Cchhchhhhcc-------cCCCCCHHHHHhc---c---CCcEEEeecCCCCCCCHHHHHHHH
Q 007802 384 LQHFKKPWAHE-------HAPIKSLLDAVKA---I---KPTMLMGTSGVGKTFTKEVVEAMA 432 (589)
Q Consensus 384 l~~~k~~fa~~-------~~~~~~L~e~V~~---v---kPtvLIG~S~~~g~Fteevv~~Ma 432 (589)
+.+..+++. .....++.+.++. . +.|++|=+++.+ ..-++.++.++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~ 275 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAK 275 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhc
Confidence 122333332 1112467777664 1 578888776632 12234444443
No 275
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=61.41 E-value=20 Score=35.03 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=58.3
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhh----------hc-ccC
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW----------AH-EHA 396 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~f----------a~-~~~ 396 (589)
..+|+|.|| |-.|..+++.|++ .| .+++++|+.. . ........+ .+ +-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 36 3688887641 1 111111111 11 111
Q ss_pred CCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 397 PIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 397 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
+..++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 12357788887789999987775421 1446788888877678988654
No 276
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=61.34 E-value=7.1 Score=38.10 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999988754 25 368999987
No 277
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=61.30 E-value=9.8 Score=36.13 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=44.3
Q ss_pred CCCCCCceEEEeCcC---hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc------c
Q 007802 324 GGTLADQTFLFLGAG---EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------E 394 (589)
Q Consensus 324 g~~l~d~riv~~GAG---sAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~------~ 394 (589)
..+++++++||.||+ ..|.++|+.+++ .| -+++++|++. . ..+.+......+.+ |
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~~---~-~~~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVGD---R-FKDRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG---G-GHHHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecch---h-hHHHHHHHHHHcCCcEEEECC
Confidence 356889999999984 455556665543 36 3688888762 1 11112111111111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 395 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 395 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
-.+..++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 11112455555554 789999777654
No 278
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=61.28 E-value=19 Score=34.28 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=43.3
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHH
Q 007802 323 VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLL 402 (589)
Q Consensus 323 ~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~ 402 (589)
...++++.++||.||++ ||...++..+.+ .| -+++++|++- ++ +.... .+.-|-.+..++.
T Consensus 9 ~~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 9 AKPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred ccccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 34568889999999753 444555555554 36 3588888741 11 21111 1111211222455
Q ss_pred HHHhcc-----CCcEEEeecCCC
Q 007802 403 DAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 403 e~V~~v-----kPtvLIG~S~~~ 420 (589)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555544 689999877754
No 279
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=60.79 E-value=9.2 Score=38.40 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=47.9
Q ss_pred HHHHHHHHHH-HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchh
Q 007802 312 VLAGILSALK-LVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP 390 (589)
Q Consensus 312 ~lAgll~Alr-~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~ 390 (589)
.++..+.+++ ..+. .+++|+|+|||..|...+.+... .|. ++++.+|+. .++ +...++.
T Consensus 149 ~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~l 208 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LAFARPY 208 (343)
T ss_dssp HHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HGGGTTT
T ss_pred HHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHh
Confidence 4444456666 4433 88999999998777766654432 363 468888763 111 1111111
Q ss_pred hhcc--cCCCCCHHHHHhcc---CCcEEEeecC
Q 007802 391 WAHE--HAPIKSLLDAVKAI---KPTMLMGTSG 418 (589)
Q Consensus 391 fa~~--~~~~~~L~e~V~~v---kPtvLIG~S~ 418 (589)
|.. .....++.+.++.. +.|++|=+++
T Consensus 209 -a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 209 -ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp -CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred -HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 221 01123566666532 5788887765
No 280
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=60.78 E-value=21 Score=35.74 Aligned_cols=86 Identities=17% Similarity=0.086 Sum_probs=55.2
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~ 407 (589)
..||+++|+ |..|--+++.+.+ .|. +-++.+|.+.- +. . .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 468999999 9888776665543 253 35777877511 00 0 00 01113679999885
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEE
Q 007802 408 IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVI 440 (589)
Q Consensus 408 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 440 (589)
.+||+.| +.+.+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~vi-I~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASV-IYVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEE-ECCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEE
Confidence 5699888 44433 6889999998887766533
No 281
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=60.74 E-value=27 Score=37.43 Aligned_cols=45 Identities=24% Similarity=0.222 Sum_probs=29.7
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCH
Q 007802 410 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTA 454 (589)
Q Consensus 410 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~ 454 (589)
.+++|-.||.+--.|+++.+.+.+....-=++-+|||...-|-++
T Consensus 122 g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~eG~a 166 (446)
T 4a7p_A 122 PSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLREGAA 166 (446)
T ss_dssp CCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCTTSH
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccccccch
Confidence 467778888876678887776664322111455788887777765
No 282
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.64 E-value=9 Score=33.80 Aligned_cols=34 Identities=6% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45689999999999999998865 25 468888875
No 283
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=60.64 E-value=24 Score=34.10 Aligned_cols=95 Identities=16% Similarity=0.237 Sum_probs=53.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+...+...-..+.-+-.+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 6677667666643 24 344444321 11111111111111112233 67888887 5
Q ss_pred CcEEEeecCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 007802 410 PTMLMGTSGVGKT-F---------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 410 PtvLIG~S~~~g~-F---------------teevv~~Ma~~~erPIIFaLS 444 (589)
+|++|-+.+.+.. . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1 234778888777678998655
No 284
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=60.56 E-value=8.2 Score=39.41 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 364 3377887754
No 285
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=60.56 E-value=7.5 Score=38.69 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=28.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+..|||+|||.+|+.+|-.|.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998865 263 6999998744
No 286
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=60.49 E-value=13 Score=36.06 Aligned_cols=87 Identities=11% Similarity=0.154 Sum_probs=54.7
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~ 407 (589)
..||+|.|| |-.|..+++.|++ .|. +++.+++. ... ++.+ ..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~d-----------~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLLD-----------SRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTTC-----------HHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-CccC-----------HHHHHHHHHh
Confidence 468999996 7777777776643 252 46666543 011 1211 1357777876
Q ss_pred cCCcEEEeecCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 408 IKPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
+++|++|=+.+..+. .|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 689999988876531 2346677777766567888654
No 287
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=60.41 E-value=7.2 Score=37.95 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988764 253 58899985
No 288
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=60.28 E-value=22 Score=32.33 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~G-AGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++..+.+++....--.++++++.| +|..|..+++++.. .| -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM-----IG-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHH-----cC-------CEEEEEeCC
Confidence 3444455554333344678999999 48778777776643 25 257777763
No 289
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=60.20 E-value=7.3 Score=37.26 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=25.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEE-Eccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL-VDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~-vD~~ 373 (589)
..+|||+|||.||+..|..+.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 290
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=60.11 E-value=7.3 Score=40.78 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=27.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
||||+|+|.||+..|..+.+. |. .-+|.++|+..-
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~~ 36 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDRD 36 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCCC
Confidence 799999999999999887543 53 236899987643
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=59.96 E-value=8.4 Score=40.92 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=28.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+..+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999988653 63 58899885
No 292
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.93 E-value=24 Score=33.01 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=25.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..|+++++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 344445555544 36 358888875
No 293
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=59.88 E-value=7.5 Score=38.76 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 263 599999874
No 294
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=59.81 E-value=7.9 Score=37.34 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|+|.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988764 264 278999985
No 295
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=59.61 E-value=17 Score=35.35 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=56.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~ 407 (589)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +-.+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777777654 25 3688887641 110011221 111111 11122357777775
Q ss_pred cCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 408 IKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
.++|++|=+.+.... -+..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345777777665567888544
No 296
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=59.38 E-value=8.2 Score=38.30 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|||+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 5689999999999999987754 253 688999864
No 297
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=59.35 E-value=8.8 Score=38.62 Aligned_cols=49 Identities=14% Similarity=0.115 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++..+.|++..+. .+++|+|+|||..|..++.+... .|. ++++.+|+.
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 201 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS 201 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 34444566644333 88999999999888777665532 363 468877753
No 298
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=59.31 E-value=7.9 Score=38.53 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998865 263 69999987543
No 299
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=58.96 E-value=31 Score=31.17 Aligned_cols=91 Identities=9% Similarity=0.135 Sum_probs=52.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh--chhhhc-ccCCCCCHHHHHh
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF--KKPWAH-EHAPIKSLLDAVK 406 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~--k~~fa~-~~~~~~~L~e~V~ 406 (589)
||+|.|| |-.|..+++.|++ .| .+++.++++. + .+... ...+.. +-.+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~---~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA----G---KITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS----H---HHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc----h---hhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7788888777754 25 4688887751 1 11110 111111 1111112 6676
Q ss_pred ccCCcEEEeecCCCCCC-------CHHHHHHHHcCCCCcEEEecC
Q 007802 407 AIKPTMLMGTSGVGKTF-------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~F-------teevv~~Ma~~~erPIIFaLS 444 (589)
. +|++|=+.+.+... ++.+++.|.+.....+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4 89999877764321 367888887765566777544
No 300
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=58.79 E-value=10 Score=39.02 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=30.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
..+|||+|||.||+..|..+.+. |. ..+|.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988653 54 1369999987644
No 301
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=58.77 E-value=8.5 Score=39.14 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=25.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988653 6 3578888753
No 302
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=58.74 E-value=11 Score=38.05 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+.+|||+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999987754 364 5889998743
No 303
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=58.68 E-value=7.5 Score=38.05 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=29.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.++||+|+|..|..-+++|+.+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57899999999999999998888653 5 358888864
No 304
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=58.61 E-value=15 Score=34.15 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=54.3
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (589)
+++.+++|.|| |-.|..+++.|++. |. ..+++++|++.- +...+......+.. |-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRKL----TFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSCC----CCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCCC----CccccccCCceEEecCcCCHHHHHHH
Confidence 45678999995 66777777766542 52 127888887521 10101111111111 11112345566
Q ss_pred HhccCCcEEEeecCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 405 VKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++ ++|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 65 58999988765310 1345666776655455666443
No 305
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=58.46 E-value=7.1 Score=46.26 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=34.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999876 86 799999987
No 306
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=58.33 E-value=9 Score=40.07 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987754 25 379999987
No 307
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=58.31 E-value=8.5 Score=39.10 Aligned_cols=36 Identities=19% Similarity=0.428 Sum_probs=28.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.++.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 356799999999999999988754 364 688999864
No 308
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=58.13 E-value=9.4 Score=39.29 Aligned_cols=38 Identities=21% Similarity=0.401 Sum_probs=28.8
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
+..+++..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3445677999999999999999988663 4 146899998
No 309
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=58.13 E-value=10 Score=38.48 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=27.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 45689999999999999998865 364 577777653
No 310
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=58.10 E-value=8.5 Score=38.31 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988865 364 5788887653
No 311
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=57.82 E-value=9.3 Score=38.80 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=27.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+.-+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 445789999999999999988865 364 577888764
No 312
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=57.60 E-value=7.3 Score=36.48 Aligned_cols=95 Identities=14% Similarity=0.113 Sum_probs=50.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh-chhhhc-ccCCCCCHHHH-Hhc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-KKPWAH-EHAPIKSLLDA-VKA 407 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~-k~~fa~-~~~~~~~L~e~-V~~ 407 (589)
||+|+|+|..|..+|+.|.. .| .++.++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-----RK-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-----TT-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 69999999999999998865 25 468888874 1110111110 001111 11111235444 33
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHc-CCCCcEEEecCC
Q 007802 408 IKPTMLMGTSGVGKTFTKEVVEAMAS-FNEKPVIFALSN 445 (589)
Q Consensus 408 vkPtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSN 445 (589)
+++++|-+.... ..-..+..+++ .+..+-|++..|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 589988655432 22334444454 356666666655
No 313
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=57.47 E-value=10 Score=39.33 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=27.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|||+|||.||+..|..|.+.+.. | .+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999998764321 3 4688887754
No 314
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=57.26 E-value=13 Score=34.49 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=38.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc-
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI- 408 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~v- 408 (589)
+|||.|| |-.|..+++.|++ .| .+++++|++. + .+.. .+.-+..+..++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5555556665543 36 3688888751 1 1111 1111111113466666655
Q ss_pred -CCcEEEeecCCCC
Q 007802 409 -KPTMLMGTSGVGK 421 (589)
Q Consensus 409 -kPtvLIG~S~~~g 421 (589)
++|++|=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 7999998877543
No 315
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=57.18 E-value=9.2 Score=39.14 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=29.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 379999987654
No 316
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=56.91 E-value=8.5 Score=38.12 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 479999999999999998865 263 58999987543
No 317
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=56.85 E-value=13 Score=36.00 Aligned_cols=78 Identities=12% Similarity=0.121 Sum_probs=43.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh------c-ccCC
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA------H-EHAP 397 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa------~-~~~~ 397 (589)
.+|+++++||-||++ ||..-++..+.+ +| -+++++|++- + .+......+. . |-.+
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLPE----T---DLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT----S---CHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCCH----H---HHHHHHHHhCCCeEEEECCCCC
Confidence 468889999999753 344444454444 36 3588888751 1 1222222211 0 1111
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 398 IKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 398 ~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566554 799999777654
No 318
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=56.84 E-value=9.5 Score=40.73 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988653 5 367888875
No 319
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=56.76 E-value=11 Score=37.82 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 56899999999999999988651 151 3699999876
No 320
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=56.72 E-value=14 Score=35.40 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=23.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 47788999999743 344444444444 36 358888764
No 321
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=56.72 E-value=8.8 Score=36.62 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=24.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57888999999743 444445555544 36 358888764
No 322
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=56.70 E-value=16 Score=34.98 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=56.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~v 408 (589)
||+|.|| |-.|..+++.|.+. .| .++..++++.- +...+......+.+ +-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88888888875431 14 35777766421 10111111111211 11222467788875
Q ss_pred CCcEEEeecCCCCC------CCHHHHHHHHcCCCCcEEEecC
Q 007802 409 KPTMLMGTSGVGKT------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 409 kPtvLIG~S~~~g~------Fteevv~~Ma~~~erPIIFaLS 444 (589)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7999987765321 2467888888877677888544
No 323
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=56.68 E-value=7.8 Score=40.59 Aligned_cols=38 Identities=16% Similarity=0.132 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
..+|||+|||.||+..|..|.+.- .| .+|.++|+..-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCcc
Confidence 468999999999999999886530 13 478999987543
No 324
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=56.60 E-value=9.4 Score=39.66 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=28.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...+|+|+|||.||+..|..|.+ .|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999998864 3641 378899886
No 325
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=56.54 E-value=11 Score=37.42 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999998854 36 4699999864
No 326
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=56.26 E-value=9 Score=38.71 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 364 588888764
No 327
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=56.05 E-value=9.2 Score=37.22 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999998865 364 588888864
No 328
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=55.87 E-value=18 Score=36.53 Aligned_cols=49 Identities=20% Similarity=0.135 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
.++..+.|++..+. -.+++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444556654443 357899999999777766554432 363 57888875
No 329
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=55.30 E-value=9.8 Score=40.16 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=27.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|||.||+..|..+.+... .|++ ..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~--~G~~----~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE--KGAE----IPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH--TTCC----CCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhh--cCCC----CCcEEEEEcC
Confidence 489999999999999998876321 2642 0138888876
No 330
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=55.14 E-value=19 Score=34.81 Aligned_cols=98 Identities=16% Similarity=0.280 Sum_probs=54.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~v 408 (589)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. +-.+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 6667667666643 35 3578777621 111111211 111111 111123577778766
Q ss_pred CCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 409 KPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 409 kPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 89999988775431 0345677777665567888644
No 331
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=55.06 E-value=8.4 Score=37.51 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=26.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 34689999999999999998865 253 5888887
No 332
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=54.95 E-value=11 Score=38.01 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
..|||+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988865 364 58999987654
No 333
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=54.89 E-value=8.7 Score=37.89 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=60.0
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhc----------hhhhc-c
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK----------KPWAH-E 394 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k----------~~fa~-~ 394 (589)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+ ..+.+ +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45789999996 8888888877754 25 46888887521 1101111111 01111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 395 HAPIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 395 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
-.+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 111235777777 69999988875321 1344788888877678998643
No 334
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=54.89 E-value=14 Score=40.11 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=20.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+++++++||.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5788899999998666666555543 262 47877764
No 335
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=54.71 E-value=10 Score=40.01 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988765 26 4689999764
No 336
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.55 E-value=14 Score=38.08 Aligned_cols=89 Identities=8% Similarity=0.094 Sum_probs=51.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc-c-CCCCCHHHHHhc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-H-APIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~-~-~~~~~L~e~V~~ 407 (589)
.||.|+|+|..|..+|..|... | .+++.+|++- +.+. .+.. . ....++.|+++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAK-----SAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHH-----HHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHH-----HHHHcCCeeeCCHHHHHHh
Confidence 5899999999999999988653 5 3688888641 1111 1111 0 112466666654
Q ss_pred c--CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007802 408 I--KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 v--kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 444 (589)
. ++|++| ++..+. -++++++.++.+.+.-||.=.|
T Consensus 65 a~~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 65 AAAEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HHHTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cccCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 2 456666 444332 4566776666544444544333
No 337
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.49 E-value=41 Score=35.97 Aligned_cols=44 Identities=23% Similarity=0.267 Sum_probs=32.3
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007802 410 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 459 (589)
Q Consensus 410 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~~E~t~eda~~ 459 (589)
-+++|=.||++--.|+++.+... ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35777788888778888887765 345655 999888888876544
No 338
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=54.40 E-value=12 Score=40.69 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=28.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 364 589999874
No 339
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=54.38 E-value=17 Score=33.61 Aligned_cols=101 Identities=16% Similarity=0.067 Sum_probs=55.6
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (589)
.+..+|+|.|| |-.|..+++.|++ .|. -.+++.++++. ++.+.+. ....+.. +-.+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHH
Confidence 34678999996 6667777776654 220 14688887741 1100110 0111111 11122357777
Q ss_pred HhccCCcEEEeecCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEecC
Q 007802 405 VKAIKPTMLMGTSGVGKT----------------F-------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~----------------F-------------teevv~~Ma~~~erPIIFaLS 444 (589)
++. +|++|=+.+.... | +..+++.|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 774 8999977664321 1 467788887665566777543
No 340
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.36 E-value=12 Score=38.98 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 45799999999999999887653 5 3689999873
No 341
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=54.31 E-value=10 Score=39.78 Aligned_cols=33 Identities=30% Similarity=0.486 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 469999986
No 342
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=54.28 E-value=25 Score=34.22 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=53.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~v 408 (589)
||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+......+.. +-.+..++.++++
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~-- 76 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALR-- 76 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTT--
T ss_pred EEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHc--
Confidence 8999996 8888888877754 25 3688888752 111112211111211 1112235777777
Q ss_pred CCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007802 409 KPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 409 kPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 444 (589)
++|++|=+.+..+.. +..+++++.+..-+.|||.=|
T Consensus 77 ~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 77 GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 499999887754311 346777777665567888544
No 343
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=54.26 E-value=12 Score=39.41 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
||.|+|+|..|..+|..+.+. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988653 5 358888874
No 344
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=54.17 E-value=10 Score=35.49 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=25.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++++.++||.||.. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999753 455555555554 36 358888874
No 345
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=54.04 E-value=11 Score=36.30 Aligned_cols=99 Identities=14% Similarity=0.168 Sum_probs=57.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 407 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~ 407 (589)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|++. .. ..+.+ +..+.. +-.+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888888775520 12 3688887641 11 00110 111111 11122357788887
Q ss_pred cCCcEEEeecCCCCC---------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 408 IKPTMLMGTSGVGKT---------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 vkPtvLIG~S~~~g~---------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 789999988775421 1346777777665567887533
No 346
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=54.03 E-value=15 Score=35.13 Aligned_cols=88 Identities=14% Similarity=0.187 Sum_probs=54.6
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
+-...+|+|.|| |-.|..+++.|++ .| .+++.+|++ .. ++.+ ..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-Dl~d-----------~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DL-DITN-----------VLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TC-CTTC-----------HHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cC-CCCC-----------HHHHHHH
Confidence 345678999987 6677777766643 25 368888774 11 1221 1246677
Q ss_pred HhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 405 VKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776689999988875431 03567777776554 7888655
No 347
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=54.03 E-value=7 Score=37.78 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=26.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 34689999999999999988754 253 47788854
No 348
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=53.80 E-value=12 Score=37.88 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=26.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+|+|+|||.+|+..|-.|.+. | .++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCCC
Confidence 699999999999999988652 6 46888887643
No 349
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=53.72 E-value=12 Score=38.08 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=26.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+|+|+|||.+|+..|-.|.+ .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999998865 26 46888888643
No 350
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=53.63 E-value=16 Score=40.22 Aligned_cols=38 Identities=11% Similarity=0.205 Sum_probs=30.6
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
+++.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCCC
Confidence 567899999999999999987755 363 69999998443
No 351
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=53.55 E-value=25 Score=33.58 Aligned_cols=38 Identities=29% Similarity=0.325 Sum_probs=25.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+++++||-||++ ||...++..+.+ +| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAK-AG-------ASVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHH-HT-------CEEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 468899999999864 444455555544 36 358888874
No 352
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=53.42 E-value=14 Score=35.28 Aligned_cols=37 Identities=32% Similarity=0.299 Sum_probs=23.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|+++++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 36778999999843 344444444444 363 58888765
No 353
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=53.35 E-value=33 Score=32.98 Aligned_cols=76 Identities=11% Similarity=0.052 Sum_probs=41.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHH
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAV 405 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V 405 (589)
++++++||-||++ ||...++..+.+ +| -+++++|++- . .+...+..+.. |-.+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----K---PSADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---CCSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----h---hcccCceEEEEccCCCHHHHHHHH
Confidence 5678999999753 344444444444 36 3688888751 1 11111111211 212223455556
Q ss_pred hcc-----CCcEEEeecCCC
Q 007802 406 KAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 406 ~~v-----kPtvLIG~S~~~ 420 (589)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 554 799999777653
No 354
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=53.28 E-value=8.9 Score=36.66 Aligned_cols=83 Identities=18% Similarity=0.331 Sum_probs=54.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
||+|.|| |-.|..+++.|++ .| .+++.+|+. .. ++.+ ..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~d-----------~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DITN-----------ISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTTC-----------HHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCCC-----------HHHHHHHHHhcC
Confidence 8999996 8777777776643 24 468888871 11 1221 135777888778
Q ss_pred CcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 410 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 410 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
+|++|=+.+.... .+..+++++.+..- .+||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 9999988775531 03457777776655 4887654
No 355
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=53.22 E-value=11 Score=36.56 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=24.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
=-|||+|||+||+-.|..+.+ .|+ ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 357999999999999877654 363 58888874
No 356
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=53.14 E-value=13 Score=37.43 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888653 64 577888754
No 357
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=53.07 E-value=9.8 Score=39.93 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=28.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
++.+|||+|+|.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35689999999999999998854 25 3699999874
No 358
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.02 E-value=12 Score=38.70 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|||+|||.||+..|..|.+ + . .| .+|.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~-~-~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRN-L-M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-H-C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHc-C-C-CC-------CeEEEECCCC
Confidence 589999999999999998866 2 1 13 4688888764
No 359
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.01 E-value=54 Score=31.83 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=44.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------c
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------E 394 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----------~ 394 (589)
.+|+++++||-||++ ||..-++..+.+ +| -+++++|++ . +.+......+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 368889999999764 444455555554 36 368888874 1 123332222221 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 395 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 395 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
-.+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11113455666655 799999776654
No 360
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=52.96 E-value=22 Score=33.32 Aligned_cols=101 Identities=18% Similarity=0.169 Sum_probs=54.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (589)
..-.+|+|.|| |-.|..+++.|++ .|- -++.+++++. ++...+......+.+ |-.+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34568999995 6677777666643 241 3677777652 111111111111111 11222457778
Q ss_pred HhccCCcEEEeecCCCCC--CCHHHHHHHHcCCCCcEEEecC
Q 007802 405 VKAIKPTMLMGTSGVGKT--FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 405 V~~vkPtvLIG~S~~~g~--Fteevv~~Ma~~~erPIIFaLS 444 (589)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966654332 2566788887655455666444
No 361
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=52.84 E-value=33 Score=32.56 Aligned_cols=77 Identities=13% Similarity=0.186 Sum_probs=40.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchh------hhc-ccCCC
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP------WAH-EHAPI 398 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~------fa~-~~~~~ 398 (589)
+|+++++||-||++ ||..-++..+.+ +| -+++++|++- . .+...... +.. |-.+.
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----P---AGEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---HHHHHHHHhCCceEEEEccCCCH
Confidence 57888999999853 344445555544 36 3588888752 1 11111111 111 11122
Q ss_pred CCHHHHHhcc-----CCcEEEeecCCC
Q 007802 399 KSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 399 ~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566554 799999766643
No 362
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=52.81 E-value=10 Score=39.93 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=28.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
++.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35689999999999999998865 25 4699999863
No 363
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=52.75 E-value=11 Score=41.12 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=28.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45689999999999999998865 363 689999864
No 364
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=52.69 E-value=12 Score=35.22 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=26.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+-+|+|+|+|.+|+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4579999999999999988765 25 368888875
No 365
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=52.69 E-value=11 Score=39.06 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
..+|||+|||.||+..|..|.+. |- ..+|.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999988653 21 146888888653
No 366
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=52.53 E-value=14 Score=35.03 Aligned_cols=78 Identities=24% Similarity=0.341 Sum_probs=43.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-------ccCC
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-------EHAP 397 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-------~~~~ 397 (589)
.+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. |-.+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 468889999999864 333444444444 36 3588888751 112222222110 1112
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 398 IKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 398 ~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23456666655 799999777654
No 367
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.45 E-value=22 Score=34.98 Aligned_cols=81 Identities=11% Similarity=0.168 Sum_probs=44.9
Q ss_pred CCCCCCceEEEeCcCh---HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhh-----hc-c
Q 007802 324 GGTLADQTFLFLGAGE---AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW-----AH-E 394 (589)
Q Consensus 324 g~~l~d~riv~~GAGs---Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~f-----a~-~ 394 (589)
..+|+++++||.||++ .|..||+.+++ +| -+++++|++. ...+.+......+ .. |
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468899999999863 44447766654 36 3588888762 1101111111111 11 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 395 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 395 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
-.+..++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 11123455666655 799999777654
No 368
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=52.26 E-value=6.2 Score=42.42 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=25.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.||||+|+|.||+..|+.|.. .+ -+|.+||++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999998876622 12 369999985
No 369
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=52.25 E-value=19 Score=36.26 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=57.7
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCc-hhchhhhc-ccCCCCCHH
Q 007802 326 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAH-EHAPIKSLL 402 (589)
Q Consensus 326 ~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~-~~k~~fa~-~~~~~~~L~ 402 (589)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..- .....+. ..+..+.. +-.+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 456679999997 7778777777654 251 46888877421 1001121 01111111 111112455
Q ss_pred HHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcC-CCCcEEEecC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASF-NEKPVIFALS 444 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~-~erPIIFaLS 444 (589)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5555 69999988775431 145677777765 4567887544
No 370
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=52.21 E-value=14 Score=38.71 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=24.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 3 368888874
No 371
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=52.20 E-value=11 Score=39.54 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4589999999999999987754 363 6899998754
No 372
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=52.17 E-value=15 Score=39.18 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=28.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
.||||+|||.||+..|..|.+. |- ..+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2579999987543
No 373
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=52.11 E-value=11 Score=40.25 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
...+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999988652 5 3689999875
No 374
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=52.08 E-value=54 Score=31.44 Aligned_cols=76 Identities=17% Similarity=0.292 Sum_probs=40.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 405 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V 405 (589)
+|++.++||.||++ ||...++..+.+ .| -+++++|++. .+.......+ -|-.+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~~~----~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYDHIE----CDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSEEEE----CCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceEEEE----ecCCCHHHHHHHH
Confidence 36778999999754 444555555554 36 3688888752 1100111011 1111112455555
Q ss_pred hcc-----CCcEEEeecCCC
Q 007802 406 KAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 406 ~~v-----kPtvLIG~S~~~ 420 (589)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 543 699999777653
No 375
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=52.05 E-value=14 Score=38.39 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=29.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
..+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 4689999999999999998865 3641 37999998643
No 376
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=51.95 E-value=42 Score=33.76 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=56.9
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHH
Q 007802 328 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAV 405 (589)
Q Consensus 328 ~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V 405 (589)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +-.+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 7777777777654 25 3688888752 110001111111211 111223577777
Q ss_pred hccCCcEEEeecCCCCC--C---------------CHHHHHHHHcCCCCcEEEecC
Q 007802 406 KAIKPTMLMGTSGVGKT--F---------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 406 ~~vkPtvLIG~S~~~g~--F---------------teevv~~Ma~~~erPIIFaLS 444 (589)
+ ++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 6 59999988775432 1 345677776665567887544
No 377
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.82 E-value=14 Score=40.99 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|||+|+|.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988653 5 3699999863
No 378
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=51.67 E-value=9.9 Score=39.31 Aligned_cols=39 Identities=13% Similarity=0.219 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhc-CeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEAR-KKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~-~~i~~vD~~GL 375 (589)
..+|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999988764 31 000 46889988753
No 379
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=51.66 E-value=12 Score=39.02 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 3579999999999999987754 25 3689999873
No 380
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=51.51 E-value=27 Score=35.56 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=25.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
..--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 333467899999999877766554432 264 57888875
No 381
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=51.48 E-value=18 Score=35.10 Aligned_cols=82 Identities=18% Similarity=0.231 Sum_probs=40.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHH
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLL 402 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~ 402 (589)
+.++.++++||-||++ ||...++..+.+ +|. +++++|++- ++.+.+...+..+.. |-.+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999753 444555555554 363 588887741 110111111111111 111223455
Q ss_pred HHHhcc-----CCcEEEeecCCC
Q 007802 403 DAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 403 e~V~~v-----kPtvLIG~S~~~ 420 (589)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 556544 789999776643
No 382
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=51.44 E-value=30 Score=35.16 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
+....+.+++..+....+++|+|.|+|..|..++.+... .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 334445667666655578999999999877777665532 362 5777775
No 383
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=51.38 E-value=36 Score=33.75 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=31.4
Q ss_pred CchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 306 QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 306 QGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
++...-.++..+.+.+..+ .-.++++++.|||..|...+.++ .+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 4433333333444444443 34688999999998876554333 32 364 56666665
No 384
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=51.19 E-value=9.4 Score=38.54 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=29.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57899999999999999999988653 5 458888864
No 385
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=51.12 E-value=40 Score=32.35 Aligned_cols=38 Identities=37% Similarity=0.537 Sum_probs=25.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 468889999999753 344455555544 36 358888874
No 386
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=51.02 E-value=14 Score=38.26 Aligned_cols=23 Identities=30% Similarity=0.471 Sum_probs=19.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHH
Q 007802 329 DQTFLFLGAGEAGTGIAELIALE 351 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~ 351 (589)
+--|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988653
No 387
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=50.99 E-value=9.7 Score=36.20 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=53.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 408 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~~v 408 (589)
||+|.|| |-.|..+++.|++. ..| .+++.+|++. ++...+......+.+ +-.+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 77777777766431 003 3578777641 110001111111111 11122357777775
Q ss_pred CCcEEEeecCCCC----CCCHHHHHHHHcCCCCcEEEecC
Q 007802 409 KPTMLMGTSGVGK----TFTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 409 kPtvLIG~S~~~g----~Fteevv~~Ma~~~erPIIFaLS 444 (589)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 799998776421 23778899988766667887544
No 388
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=50.99 E-value=17 Score=36.63 Aligned_cols=57 Identities=21% Similarity=0.157 Sum_probs=34.8
Q ss_pred CCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 305 IQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 305 iQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++.....++..+.|++..+. -.+++|+|+|||..|...+.+.. + .|. ++|+.+|+.
T Consensus 157 ~~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~~ 213 (363)
T 3m6i_A 157 ENGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDID 213 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEESC
T ss_pred HHHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECCC
Confidence 344333345555666755543 35789999999877766654442 2 364 568877753
No 389
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=50.75 E-value=16 Score=38.83 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=26.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD 371 (589)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988651 15 4689999
No 390
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=50.73 E-value=7.9 Score=37.44 Aligned_cols=101 Identities=10% Similarity=0.085 Sum_probs=57.5
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHHHh
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVK 406 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~V~ 406 (589)
..+|+|.|| |..|..+++.|++. | ..++..++++.- +.....+......+.+ +-.+..+|.++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~~--~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNPR--KKAAKELRLQGAEVVQGDQDDQVIMELALN 71 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCTT--SHHHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCCC--CHHHHHHHHCCCEEEEecCCCHHHHHHHHh
Confidence 468999998 88888888877652 4 136777776410 0000001111111111 1112246778887
Q ss_pred ccCCcEEEeecCCCCC--------CCHHHHHHHHcCCCCcEEEecCC
Q 007802 407 AIKPTMLMGTSGVGKT--------FTKEVVEAMASFNEKPVIFALSN 445 (589)
Q Consensus 407 ~vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLSN 445 (589)
. +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 72 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 72 G--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp T--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred c--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 5 8999987653211 2557788887766667888 664
No 391
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=50.68 E-value=11 Score=40.06 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=29.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 456899999999999999988653 21 257999998753
No 392
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=50.64 E-value=54 Score=31.11 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=42.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
.++++.++||.||++ ||...++..+.+ .| -+++++|++- ...+.+. ...+.-|- ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 468899999999853 344444444444 36 3588888753 1001111 11111111 2456667
Q ss_pred Hhcc-CCcEEEeecCCC
Q 007802 405 VKAI-KPTMLMGTSGVG 420 (589)
Q Consensus 405 V~~v-kPtvLIG~S~~~ 420 (589)
++.+ +.|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 7666 799999877643
No 393
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=50.57 E-value=13 Score=38.75 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
-+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999987754 25 3689999873
No 394
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=50.57 E-value=13 Score=39.03 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LG-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 3579999999999999988765 25 3699999874
No 395
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=50.45 E-value=35 Score=32.44 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=24.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..|+++++||-||++ ||...++..+.+ +| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 458899999999754 344444444444 36 368888874
No 396
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.36 E-value=14 Score=35.72 Aligned_cols=101 Identities=15% Similarity=0.162 Sum_probs=55.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc------ccCCCCCHHH
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------EHAPIKSLLD 403 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~------~~~~~~~L~e 403 (589)
.||.|+|+|..|..+|..|... | .+++++|++.= +.+.+......... ......+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 3899999999999999888652 5 36888887521 00001100000000 0000012222
Q ss_pred HHhcc-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007802 404 AVKAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 448 (589)
Q Consensus 404 ~V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 448 (589)
+.+.+ +.|++| ++..+ -..+++++.++.+. +..+|..++|...
T Consensus 68 ~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22211 478777 34333 24688888887654 4678888998653
No 397
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.29 E-value=12 Score=39.04 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999987754 25 369999986
No 398
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=50.25 E-value=37 Score=33.75 Aligned_cols=48 Identities=21% Similarity=0.182 Sum_probs=31.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 314 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 314 Agll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...+.+++..+. -.+++++|+|||+.|.-.+.++..+ .| .+++.+|+.
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~~ 197 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDIN 197 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEESC
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEECc
Confidence 344567776654 3578999999999886555444332 23 468877763
No 399
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=50.06 E-value=16 Score=36.66 Aligned_cols=148 Identities=14% Similarity=0.058 Sum_probs=82.3
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~ 407 (589)
+.||+++|+ |.-|--+++.+.+ .|. +-++.++.+.- +. . . ...+-..++.|+.+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~-----~g~------~~v~~VnP~~~---g~-~-i--------~G~~vy~sl~el~~~ 62 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLT-----YGT------KIVAGVTPGKG---GM-E-V--------LGVPVYDTVKEAVAH 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-E--------TTEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHH-----cCC------eEEEEECCCCC---Cc-e-E--------CCEEeeCCHHHHhhc
Confidence 578999999 8887777665543 264 35677777631 10 0 0 011122679999886
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCCCC-cEEEecCCCCCCCCCCHHHHhcc--ccCcEEEeeCCCCCcceeCCeeeC
Q 007802 408 IKPTMLMGTSGVGKTFTKEVVEAMASFNEK-PVIFALSNPTSQSECTAEEAYTW--SKGQAIFASGSPFDPVEYNGKVFV 484 (589)
Q Consensus 408 vkPtvLIG~S~~~g~Fteevv~~Ma~~~er-PIIFaLSNPt~~~E~t~eda~~w--T~GraifAsGSPf~pv~~~G~~~~ 484 (589)
.+||+.| +.+ +..+..+++++..+..-+ -|||+-- -+|..-+++.+. ..|-.+++--+| -.+.
T Consensus 63 ~~~Dv~I-i~v-p~~~~~~~~~ea~~~Gi~~vVi~t~G----~~~~~~~~l~~~a~~~gi~vigPNc~--------Gii~ 128 (288)
T 1oi7_A 63 HEVDASI-IFV-PAPAAADAALEAAHAGIPLIVLITEG----IPTLDMVRAVEEIKALGSRLIGGNCP--------GIIS 128 (288)
T ss_dssp SCCSEEE-ECC-CHHHHHHHHHHHHHTTCSEEEECCSC----CCHHHHHHHHHHHHHHTCEEEESSSC--------EEEE
T ss_pred CCCCEEE-Eec-CHHHHHHHHHHHHHCCCCEEEEECCC----CCHHHHHHHHHHHHHcCCEEEeCCCC--------eEEc
Confidence 6799988 444 336889999988876655 3455421 122212233332 235556655554 3455
Q ss_pred CCCccccccchhh----hHHHHHhCCcccCHHHHH
Q 007802 485 PGQGNNAYIFPGL----GLGLIISGAIRVRDEMLL 515 (589)
Q Consensus 485 p~Q~NN~~iFPGi----glG~~~~~a~~Itd~m~~ 515 (589)
|+++.|.. ||+. |-=+++|+.-.++-+++.
T Consensus 129 ~~~~~~~~-~~~~~~~~G~va~vsqSG~l~~~~~~ 162 (288)
T 1oi7_A 129 AEETKIGI-MPGHVFKRGRVGIISRSGTLTYEAAA 162 (288)
T ss_dssp TTTEEEES-SCGGGCCEEEEEEEESCHHHHHHHHH
T ss_pred CCCceeEE-cccCCCCCCCEEEEECCHHHHHHHHH
Confidence 77777765 3332 112344555555444443
No 400
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=50.06 E-value=12 Score=35.95 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=24.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|||.||+..|..+.+ .|+ ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999987754 253 56777653
No 401
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=49.77 E-value=18 Score=35.71 Aligned_cols=101 Identities=13% Similarity=0.196 Sum_probs=58.1
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhch----------hhhc-c
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK----------PWAH-E 394 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~----------~fa~-~ 394 (589)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.-- ...+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFAT---GHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCc---cchhhHHHHhhhcccccCCceEEEECC
Confidence 45679999998 8777777777654 25 36888887421 10011211111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 395 HAPIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 395 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
-.+..++.++++ ++|++|=+.+..+. -+..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111235677777 69999988875431 1345677777655566887544
No 402
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=49.71 E-value=11 Score=39.44 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4589999999999999988754 25 469999986
No 403
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=49.66 E-value=32 Score=31.93 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++++.+++|.||+. ||...++..+.+ .| .+++++|++
T Consensus 3 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999743 444455555544 36 358888774
No 404
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=49.63 E-value=25 Score=33.67 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|++.++||.||+. ||...++..+.+ +| -+++++|++
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 40 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDIL 40 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999754 444445555544 36 358888774
No 405
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=49.49 E-value=54 Score=31.60 Aligned_cols=38 Identities=26% Similarity=0.382 Sum_probs=26.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+++++||-||++ ||...++..+.+ +| -+++++|++
T Consensus 2 ~~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 2 LTLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 367889999999864 455555555555 36 368988886
No 406
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=49.47 E-value=39 Score=33.52 Aligned_cols=106 Identities=28% Similarity=0.312 Sum_probs=57.1
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCccc---CCcccCCchh------chhhhcc
Q 007802 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIV---SSRKESLQHF------KKPWAHE 394 (589)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~---~~r~~~l~~~------k~~fa~~ 394 (589)
.++++.+|+|.|| |-.|..+++.|++. ..| .+++.+|+..--. ..+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIA- 74 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEE-
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEE-
Confidence 4578899999976 77777777766541 014 4688888742100 0000001111 111111
Q ss_pred cCCCC---CHHHHHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 395 HAPIK---SLLDAVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 395 ~~~~~---~L~e~V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
.++. ++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 75 -~Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 75 -ADINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp -CCTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred -CCCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 1222 34444 33479999987764431 134677777766555 888665
No 407
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=49.34 E-value=11 Score=37.11 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=26.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
...+|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 254 57788864
No 408
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=49.09 E-value=37 Score=32.55 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=23.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++++.++||.||.. ||...++..+.+ .|. +++++|++
T Consensus 29 ~l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 36788999998743 444455555544 363 58888774
No 409
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=49.03 E-value=9.9 Score=40.65 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=0.0
Q ss_pred EEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE--EEccc
Q 007802 332 FLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW--LVDSK 373 (589)
Q Consensus 332 iv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~--~vD~~ 373 (589)
||++|||.+|+++|-.|.+......-+...+.....| ++|++
T Consensus 42 vi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~ 85 (501)
T 4b63_A 42 LLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQ 85 (501)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESS
T ss_pred EEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEecc
No 410
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=48.98 E-value=26 Score=36.08 Aligned_cols=101 Identities=13% Similarity=0.096 Sum_probs=46.9
Q ss_pred HHHHHHhCCCCCC-ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc
Q 007802 317 LSALKLVGGTLAD-QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH 395 (589)
Q Consensus 317 l~Alr~~g~~l~d-~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~ 395 (589)
|+.-.+....+++ .||-|+|+|..|-.-++-+...-.....+. +-.+=+-++|++ . +.. +.+|...
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~---~~a----~~~a~~~ 79 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----Q---AMA----ERHAAKL 79 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----H---HHH----HHHHHHH
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----H---HHH----HHHHHHc
Confidence 4444455556666 599999999887655555543211100010 001123355553 1 112 2333321
Q ss_pred --C-CCCCHHHHHhccCCcEEEeecCCCCCCCHHHH-HHHH
Q 007802 396 --A-PIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVV-EAMA 432 (589)
Q Consensus 396 --~-~~~~L~e~V~~vkPtvLIG~S~~~g~Fteevv-~~Ma 432 (589)
+ -..++.|.++.-++|+++ +++.+ .+-.+++ ++|.
T Consensus 80 ~~~~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~ 118 (412)
T 4gqa_A 80 GAEKAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIA 118 (412)
T ss_dssp TCSEEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCCeEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHH
Confidence 1 236899999988899887 66655 3444444 4444
No 411
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=48.97 E-value=31 Score=32.02 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=21.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 5 ~k~vlVtGasg---giG~~~a~~l~~-~G~-------~V~~~~r~ 38 (234)
T 2ehd_A 5 KGAVLITGASR---GIGEATARLLHA-KGY-------RVGLMARD 38 (234)
T ss_dssp CCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 46789998653 444455555544 363 58888764
No 412
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=48.87 E-value=13 Score=38.88 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+|||+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 3579999999999999987754 253 68999986
No 413
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=48.82 E-value=12 Score=35.99 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=24.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 58999999999998876644 364 57788874
No 414
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=48.71 E-value=39 Score=32.20 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=42.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------cc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 395 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----------~~ 395 (589)
+++++++||.||++ ||..-++..+.+ .|. +++++|++. +.+......+.. |-
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EGF-------TVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TTC-------EEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 57788999999864 455555555554 363 588888741 123222222211 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEeecCCC
Q 007802 396 APIKSLLDAVKAI----KPTMLMGTSGVG 420 (589)
Q Consensus 396 ~~~~~L~e~V~~v----kPtvLIG~S~~~ 420 (589)
.+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 1112455555554 789999776643
No 415
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=48.66 E-value=29 Score=34.81 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=35.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCCC--ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 307 GTASVVLAGILSALKLVGGTLAD--QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 307 GTaaV~lAgll~Alr~~g~~l~d--~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
++-.+.++..+.|+...+.--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556666333333356 89999998 8888777665543 363 478888764
No 416
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=48.62 E-value=11 Score=37.37 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|||.+|+.+|..|.+.. ..| .++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998885410 024 368889876
No 417
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=48.56 E-value=13 Score=37.67 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=26.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|||+|||.||+..|..+.+ .|. .-+|.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999988754 353 2358888765
No 418
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=48.44 E-value=13 Score=39.11 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=28.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
.+|||+|||.||+..|..+.+.. .| .++.++|+...+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 58999999999999999886531 13 479999987544
No 419
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.42 E-value=14 Score=39.33 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999998865 25 4699999874
No 420
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=48.33 E-value=32 Score=33.21 Aligned_cols=92 Identities=12% Similarity=0.147 Sum_probs=49.2
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007802 329 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 407 (589)
Q Consensus 329 d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~ 407 (589)
+.+|+|.|| |-.|..+++.|++ .| .+++.+|+. +.. . . .+.-+-.+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~--~--~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR--P--K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC--C--C-eEEecCCCHHHHHHHHHh
Confidence 358999998 7778777777654 25 367877753 111 0 1 111122223467788887
Q ss_pred cCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 408 IKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988765421 03457777766543 6777544
No 421
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=48.21 E-value=22 Score=33.18 Aligned_cols=38 Identities=24% Similarity=0.366 Sum_probs=24.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGA---GIGKEIAITFAT-AG-------ASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEECCcc---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 357888999999742 344445555444 36 358888874
No 422
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.19 E-value=15 Score=38.48 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=26.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999877553 5 469999984
No 423
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=48.13 E-value=15 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.-.|||+|||.+|+++|-.+.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 364 588999864
No 424
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=48.12 E-value=16 Score=38.48 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+..|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988865 26 368999984
No 425
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=48.12 E-value=12 Score=39.39 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
.+|||+|||.||+..|-.|..... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999998876431 14 36889998644
No 426
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=48.05 E-value=16 Score=38.99 Aligned_cols=37 Identities=30% Similarity=0.402 Sum_probs=29.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 45789999999999999988765 363 68899886443
No 427
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=47.93 E-value=16 Score=38.31 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+..|+|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988754 36 36899996653
No 428
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=47.90 E-value=21 Score=33.96 Aligned_cols=38 Identities=32% Similarity=0.427 Sum_probs=24.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+++++||.||++ ||...++..+.+ +|. +++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DGA-------TVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 468899999999753 344444444444 363 58888764
No 429
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=47.73 E-value=13 Score=38.83 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
.+|||+|+|.||+..|..|.+.- .| .+|.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999886531 13 47999998753
No 430
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=47.65 E-value=34 Score=32.53 Aligned_cols=80 Identities=10% Similarity=0.099 Sum_probs=43.6
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhh-------hc-
Q 007802 325 GTLADQTFLFLGAGE---AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW-------AH- 393 (589)
Q Consensus 325 ~~l~d~riv~~GAGs---Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~f-------a~- 393 (589)
.++++.++||.||+. .|..+|+.+++ .|. +++++|+.. ...+.+.+....+ ..
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAGE----RLEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCch----HHHHHHHHHHHhcCCCCceEEeC
Confidence 367889999999853 45556666643 363 588888752 1001111111111 11
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 394 EHAPIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 394 ~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
|-.+..++.++++.+ ++|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 112223466666655 789999877654
No 431
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=47.47 E-value=16 Score=39.26 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=29.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
..+|||+|||.||+..|-.|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876420 14 46899998644
No 432
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=47.37 E-value=18 Score=37.86 Aligned_cols=33 Identities=24% Similarity=0.177 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+-.|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999888653 5 468999986
No 433
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=47.22 E-value=14 Score=37.01 Aligned_cols=101 Identities=19% Similarity=0.222 Sum_probs=59.8
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhh-------hc-cc
Q 007802 325 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW-------AH-EH 395 (589)
Q Consensus 325 ~~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~f-------a~-~~ 395 (589)
..+++.+|+|.|| |..|..+++.|++. .|. ++++++|++-- .+...+..+ .. +-
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECCC
Confidence 4577899999996 88888888877642 142 47888877411 111111111 11 11
Q ss_pred CCCCCHHHHHhccCCcEEEeecCCCCC----C------------CHHHHHHHHcCCCCcEEEecC
Q 007802 396 APIKSLLDAVKAIKPTMLMGTSGVGKT----F------------TKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 396 ~~~~~L~e~V~~vkPtvLIG~S~~~g~----F------------teevv~~Ma~~~erPIIFaLS 444 (589)
.+..++.++++ ++|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 11235667776 58999988876531 0 235667776665567777554
No 434
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=47.19 E-value=22 Score=33.85 Aligned_cols=37 Identities=24% Similarity=0.388 Sum_probs=24.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AGA-------TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 47788999999753 444455555554 363 58888775
No 435
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=47.15 E-value=17 Score=38.37 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHH-HHHh-ccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIAL-EMSK-QTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~-~~~~-~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|+|+|||.||+..|..+.. .... ..| .+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4689999999999999999876 4210 002 468899986
No 436
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=47.14 E-value=16 Score=39.05 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=27.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 365 46677764
No 437
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=47.12 E-value=15 Score=35.02 Aligned_cols=78 Identities=22% Similarity=0.250 Sum_probs=42.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-------ccCC
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-------EHAP 397 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-------~~~~ 397 (589)
.+|+++++||-||++ ||...++..+.+ +|. +++++|++- +.+......+.. |-.+
T Consensus 5 ~~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d 66 (248)
T 3op4_A 5 MNLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTN 66 (248)
T ss_dssp TCCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCC
Confidence 357889999999764 344445555544 363 588877641 112221111111 1112
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 398 IKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 398 ~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
..++.++++.+ +.|+||=..+..
T Consensus 67 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 67 PESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556544 799999877654
No 438
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=47.12 E-value=16 Score=39.10 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=28.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
..+|||+|||.||+..|-.|..... .| -+|.++|+.-+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCCC
Confidence 4689999999999999998865310 25 36889998543
No 439
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=47.05 E-value=33 Score=31.42 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=51.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCC-CCCHHHHHhc
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAP-IKSLLDAVKA 407 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~-~~~L~e~V~~ 407 (589)
||+|.|| |-.|..+++.|++ .| .+++.++++.- +...+ .+..+.+ +-.+ ..++.++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~- 62 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLH- 62 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTT-
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHc-
Confidence 7899994 6666666665543 35 46888887521 11111 1111111 1122 234666666
Q ss_pred cCCcEEEeecCCCCC--------CCHHHHHHHHcCCCCcEEEecC
Q 007802 408 IKPTMLMGTSGVGKT--------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 408 vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLS 444 (589)
++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 63 -~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 63 -GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp -TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred -CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 48999987765421 1456777776655455666433
No 440
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=47.05 E-value=39 Score=34.14 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=25.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
..-.+++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33457899999999877766655432 263 46888875
No 441
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=46.88 E-value=17 Score=38.01 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 3579999999999999998865 25 3699999854
No 442
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=46.83 E-value=21 Score=37.70 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=28.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999988764 20 125799999864
No 443
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=46.78 E-value=18 Score=37.87 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=28.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 327 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 327 l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
-+..+|+|+|||.||+..|..|.++ | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999988653 6 368888876
No 444
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=46.73 E-value=17 Score=38.99 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=28.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45689999999999999998865 264 588999864
No 445
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=46.73 E-value=17 Score=36.63 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=24.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|+|+|||.||+..|-.|.+. .-| .++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G-------~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPL-------WAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------SEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCC-------CCEEEEECC
Confidence 699999999999999887653 014 357777765
No 446
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=46.70 E-value=14 Score=40.18 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1364 689999864
No 447
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=46.69 E-value=39 Score=34.14 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=25.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 3357899999999887766655432 263 46888875
No 448
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=46.67 E-value=1.1e+02 Score=31.73 Aligned_cols=129 Identities=19% Similarity=0.243 Sum_probs=79.0
Q ss_pred HhcCCceeeEeecCCCccHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHH
Q 007802 269 QNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAE 346 (589)
Q Consensus 269 ~~fGp~~lIq~EDf~~~~Af~iL~ryr~~~~~Fn--DDiQGTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ 346 (589)
.+| .++++ +--++ ..+.+.|.+|- ++|+.| || .-=-+=+||=++.-.+..| +|++.||+++|-| . -+|+
T Consensus 123 s~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nva~ 193 (340)
T 4ep1_A 123 SHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NVCH 193 (340)
T ss_dssp HHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HHHH
T ss_pred HHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hhHH
Confidence 345 44433 44443 34444555554 688888 44 2333456777776666655 5999999999998 2 3788
Q ss_pred HHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhccc-CC---CCCHHHHHhccCCcEEEeecCC
Q 007802 347 LIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-AP---IKSLLDAVKAIKPTMLMGTSGV 419 (589)
Q Consensus 347 ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~-~~---~~~L~e~V~~vkPtvLIG~S~~ 419 (589)
-++.++.+ .|+ +|.++-.+|+.-.. .+-+.-+.+|+.. .. ..++.|+|+. .||+.-..=+
T Consensus 194 Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 194 SLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 77777766 374 58888888875321 1111222333321 11 2689999997 9999876543
No 449
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=46.57 E-value=49 Score=33.42 Aligned_cols=33 Identities=18% Similarity=0.434 Sum_probs=24.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+++|+|.|||..|..++.++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 8999999998777766665543 25 2 68888764
No 450
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=46.48 E-value=18 Score=37.01 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 57999999999999999886520 04 3588999863
No 451
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=46.40 E-value=46 Score=31.72 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=40.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------cc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 395 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----------~~ 395 (589)
.+++.++||.||++ ||...|+..+.+ .|. +++++|++. +.+......+.. |-
T Consensus 26 ~l~~k~vlITGas~---gIG~~la~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~ 87 (262)
T 3rkr_A 26 SLSGQVAVVTGASR---GIGAAIARKLGS-LGA-------RVVLTARDV-------EKLRAVEREIVAAGGEAESHACDL 87 (262)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECCT
T ss_pred ccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEECCH-------HHHHHHHHHHHHhCCceeEEEecC
Confidence 46788999999743 333344444444 363 588888741 112222222211 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEeecCC
Q 007802 396 APIKSLLDAVKAI-----KPTMLMGTSGV 419 (589)
Q Consensus 396 ~~~~~L~e~V~~v-----kPtvLIG~S~~ 419 (589)
.+..++.++++.+ ++|+||=..+.
T Consensus 88 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 88 SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 1113455555554 79999977765
No 452
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=46.10 E-value=47 Score=33.09 Aligned_cols=79 Identities=16% Similarity=0.333 Sum_probs=51.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007802 331 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 409 (589)
Q Consensus 331 riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~V~~vk 409 (589)
||+|.|| |-.|-.+++.|++. |. -+++.+|+. .+..+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999994 88888888877653 52 257766664 011346677774
Q ss_pred CcEEEeecCCCCC------------CCHHHHHHHHcCCCC-cEEEecC
Q 007802 410 PTMLMGTSGVGKT------------FTKEVVEAMASFNEK-PVIFALS 444 (589)
Q Consensus 410 PtvLIG~S~~~g~------------Fteevv~~Ma~~~er-PIIFaLS 444 (589)
+|++|=+.+.... .+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 8999876654321 246788888776555 6777544
No 453
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=46.07 E-value=60 Score=30.72 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=25.3
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..+|++.++||.||+. ||...++..+.+ +| -+++++|++
T Consensus 9 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (260)
T 2zat_A 9 RKPLENKVALVTASTD---GIGLAIARRLAQ-DG-------AHVVVSSRK 47 (260)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 3568889999999754 444445555544 36 368888874
No 454
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=46.00 E-value=15 Score=38.10 Aligned_cols=32 Identities=16% Similarity=0.320 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999887653 64 68888875
No 455
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.97 E-value=13 Score=37.97 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 376 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv 376 (589)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4689999999999999988732 23 79999987543
No 456
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=45.93 E-value=17 Score=35.36 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=24.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.--+||+|||.||+..|-.+.+ .| .++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 3458999999999988755433 35 358889875
No 457
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=45.88 E-value=16 Score=35.80 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=57.2
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcc-cCCchhch----------hhhc-ccC
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK-ESLQHFKK----------PWAH-EHA 396 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~-~~l~~~k~----------~fa~-~~~ 396 (589)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.-- ..|. ....+... .+.. +-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 7777777777754 25 35888876411 0010 00111111 1111 111
Q ss_pred CCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007802 397 PIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 444 (589)
Q Consensus 397 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 444 (589)
+..++.++++..++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 11357777876679999988775421 1446778887766567888544
No 458
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=45.87 E-value=15 Score=38.06 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=27.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCc
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 375 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 375 (589)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999886531 13 57999998753
No 459
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=45.83 E-value=25 Score=34.37 Aligned_cols=79 Identities=15% Similarity=0.223 Sum_probs=39.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhh----------c
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA----------H 393 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa----------~ 393 (589)
..+++++++||.||++ ||...++..+.+ +| -+++++|++- +.+......+. .
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~ 89 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRRP-------DVLDAAAGEIGGRTGNIVRAVV 89 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhcCCCeEEEEE
Confidence 3568899999999754 344444454444 36 3588888741 11222111111 1
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 394 -EHAPIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 394 -~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
|-.+..++.++++.+ ++|+||=..+..
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111223455666655 799999777654
No 460
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.82 E-value=17 Score=40.78 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+..+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999998865 25 3599999864
No 461
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=45.72 E-value=36 Score=33.23 Aligned_cols=77 Identities=14% Similarity=0.260 Sum_probs=41.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------cc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 395 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----------~~ 395 (589)
++++.++||-||++ ||...++..+.+ +| -+++++|++- +.+......+.. |-
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 25 NQPSPVALITGAGS---GIGRATALALAA-DG-------VTVGALGRTR-------TEVEEVADEIVGAGGQAIALEADV 86 (283)
T ss_dssp --CCCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHTTTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEccC
Confidence 46778999999754 444455555544 36 3688888741 112222222111 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 396 APIKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 396 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
.+..++.++++.+ ++|+||=..+..
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1112455666655 799999777653
No 462
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=45.69 E-value=46 Score=31.90 Aligned_cols=77 Identities=19% Similarity=0.268 Sum_probs=39.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 404 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~~~~~~~L~e~ 404 (589)
.+++++++||.||+. ||...++..+.+ .| -+++++|++. + .+... ..+.-|-.+..++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG----E---PPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----C---CCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---hhccc-eEEEecCCCHHHHHHH
Confidence 356778999999754 444555555555 36 3688888752 1 12210 0111111112244455
Q ss_pred Hhcc-----CCcEEEeecCCC
Q 007802 405 VKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 405 V~~v-----kPtvLIG~S~~~ 420 (589)
++.+ ++|+||=..+..
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 5543 589999776643
No 463
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=45.67 E-value=37 Score=34.66 Aligned_cols=49 Identities=20% Similarity=0.131 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
.++..+.|++.. .--.+++|+|+|+|..|...+.+.. + .|. ++|+.+|+
T Consensus 170 ~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHHc-CCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 344456666643 3346789999999988776655443 2 364 56887776
No 464
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=45.64 E-value=75 Score=30.78 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=41.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------cc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 395 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----------~~ 395 (589)
+|+++++||-||++ ||..-++..+.+ +|. +++++|++- + .+......+.. |-
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AGA-------HVILHGVKP----G---STAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TTC-------EEEEEESST----T---TTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEcCCH----H---HHHHHHHHHHhcCCeEEEEEecC
Confidence 57888999999753 344445555544 363 688888741 1 12222222211 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEeecCC
Q 007802 396 APIKSLLDAVKAI----KPTMLMGTSGV 419 (589)
Q Consensus 396 ~~~~~L~e~V~~v----kPtvLIG~S~~ 419 (589)
.+..++.++++.+ +.|+||=..+.
T Consensus 92 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 92 SEAGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp TSTTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2223455555543 79999977664
No 465
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=45.55 E-value=18 Score=37.15 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988854 24 5788888863
No 466
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=45.54 E-value=20 Score=38.28 Aligned_cols=26 Identities=27% Similarity=0.450 Sum_probs=23.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALE 351 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~ 351 (589)
+|++++|||+|+|..|..-+++|..+
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhC
Confidence 57889999999999999999999764
No 467
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=45.52 E-value=17 Score=38.17 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 3579999999999999987754 263 599999853
No 468
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.46 E-value=51 Score=31.50 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=26.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+|+++++||-||++ ||...++..+.+ +| -+++++|+..
T Consensus 7 ~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~~~~ 44 (287)
T 3pxx_A 7 RVQDKVVLVTGGAR---GQGRSHAVKLAE-EG-------ADIILFDICH 44 (287)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred ccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CeEEEEcccc
Confidence 57889999999864 444455555554 36 3688898763
No 469
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=45.32 E-value=18 Score=38.23 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=26.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 35799999999999999988653 53 566676653
No 470
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=45.22 E-value=51 Score=31.54 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=26.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
..+|+++++||-||++ ||...|+..+.+ +| -+++++|++.
T Consensus 8 ~~~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~ 47 (278)
T 3sx2_A 8 EGPLTGKVAFITGAAR---GQGRAHAVRLAA-DG-------ADIIAVDLCD 47 (278)
T ss_dssp -CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred CCCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CeEEEEeccc
Confidence 4578999999999753 344444444444 36 3588888763
No 471
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=45.17 E-value=29 Score=32.71 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=43.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhh------hc-ccCC
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW------AH-EHAP 397 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~f------a~-~~~~ 397 (589)
.++++.++||.||+. ||...++..+.+ .| -+++++|++- . .+....+.+ .. |-.+
T Consensus 8 ~~~~~k~vlVTGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~~ 69 (265)
T 2o23_A 8 RSVKGLVAVITGGAS---GLGLATAERLVG-QG-------ASAVLLDLPN----S---GGEAQAKKLGNNCVFAPADVTS 69 (265)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT----S---SHHHHHHHHCTTEEEEECCTTC
T ss_pred cCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCc----H---hHHHHHHHhCCceEEEEcCCCC
Confidence 467889999999753 444555555554 36 3588888752 1 122211111 11 1111
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 398 IKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 398 ~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
..++.++++.+ ++|+||=..+..
T Consensus 70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 70 EKDVQTALALAKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCccC
Confidence 13455666644 799999777653
No 472
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=45.10 E-value=36 Score=33.75 Aligned_cols=50 Identities=12% Similarity=-0.070 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++..+.+++....--.+++++|.|| |..|..+++++.. .| -+++.+|++
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 44444555553344446789999996 8888888776643 36 258887764
No 473
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=45.09 E-value=18 Score=37.53 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=27.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 331 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 331 riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999886631 13 5799999875
No 474
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=45.05 E-value=67 Score=30.32 Aligned_cols=76 Identities=16% Similarity=0.209 Sum_probs=41.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 404 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~-~~~~~~~L~e~ 404 (589)
+|+++++||.||++ ||...++..+.+ +| -+++++|++-- +......+.. |-.+..++.++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~--------~~~~~~~~~~~D~~d~~~~~~~ 64 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFT--------QEQYPFATEVMDVADAAQVAQV 64 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCC--------SSCCSSEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchh--------hhcCCceEEEcCCCCHHHHHHH
Confidence 57788999999753 344445555544 36 35888887521 1111001111 11122345555
Q ss_pred Hhcc-----CCcEEEeecCCC
Q 007802 405 VKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 405 V~~v-----kPtvLIG~S~~~ 420 (589)
++.+ ++|+||=..+..
T Consensus 65 ~~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 65 CQRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 6544 799999776643
No 475
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=45.02 E-value=16 Score=34.83 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=24.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++++.++||.||+. ||...|+..+.+ .| -+++++|++
T Consensus 12 ~~l~~k~vlITGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 49 (278)
T 2bgk_A 12 NRLQDKVAIITGGAG---GIGETTAKLFVR-YG-------AKVVIADIA 49 (278)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccccCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 457889999999743 444455555544 36 358888764
No 476
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=44.97 E-value=24 Score=34.68 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=25.6
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGE---AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGs---Ag~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
..|+++++||-||++ .|..+|+.+.+ +|. +++++|++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~-----~G~-------~V~~~~r~ 66 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAARE-----AGA-------ELAFTYQG 66 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHH-----TTC-------EEEEEECS
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEEcCC
Confidence 468899999999864 45556665543 363 58888875
No 477
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=44.92 E-value=37 Score=33.01 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=56.8
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccC-CcccCC-chhchhhhc-ccCCCCCHH
Q 007802 327 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVS-SRKESL-QHFKKPWAH-EHAPIKSLL 402 (589)
Q Consensus 327 l~d~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~-~r~~~l-~~~k~~fa~-~~~~~~~L~ 402 (589)
-...||+|.|| |-.|..+++.|++ .| .+++.+|+..--.. .+...+ ......+.. +-.+..++.
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 79 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 79 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH
Confidence 45678999987 7677777766654 25 36888887521000 000001 000111111 111223577
Q ss_pred HHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007802 403 DAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFN-EKPVIFALS 444 (589)
Q Consensus 403 e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 444 (589)
++++.+++|++|=+.+.... -+..+++++.+.. .+.+||.=|
T Consensus 80 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 80 RAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 88888889999988775431 1335677777655 367887544
No 478
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=44.90 E-value=45 Score=32.89 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=25.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+++++||-||++ ||...|+..+.+ .| -+++++|++
T Consensus 37 ~~l~~k~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 74 (293)
T 3rih_A 37 FDLSARSVLVTGGTK---GIGRGIATVFAR-AG-------ANVAVAARS 74 (293)
T ss_dssp TCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cCCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 457889999999754 344445555544 36 368888875
No 479
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=44.80 E-value=71 Score=33.05 Aligned_cols=136 Identities=7% Similarity=0.009 Sum_probs=85.0
Q ss_pred HHHHHHHHHhcCCceeeEeecCCCccHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhC------CCCCCceE
Q 007802 261 QEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVG------GTLADQTF 332 (589)
Q Consensus 261 defv~av~~~fGp~~lIq~EDf~~~~Af~iL~ryr~~~~~Fn--DDiQGTaaV~lAgll~Alr~~g------~~l~d~ri 332 (589)
...++ +-.+| .++ |-+-.++ +.+.+.|.+|- ++|+.| || .-=-.=+||=++.-.+..| ++|++.||
T Consensus 91 ~DTar-vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~v 164 (328)
T 3grf_A 91 QDTAE-VFSRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKF 164 (328)
T ss_dssp HHHHH-HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCE
T ss_pred HHHHH-HHHhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEE
Confidence 33444 33456 443 3355554 34445555653 689998 65 4445567777777777766 47999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhcc---cC---CCCCHHHHHh
Q 007802 333 LFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE---HA---PIKSLLDAVK 406 (589)
Q Consensus 333 v~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~~---~~---~~~~L~e~V~ 406 (589)
.++|-+.- .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+.+.-+.++.. .. ...++.|+|+
T Consensus 165 a~vGD~~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~ 233 (328)
T 3grf_A 165 AYCGDSMN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCE 233 (328)
T ss_dssp EEESCCSS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHT
T ss_pred EEeCCCCc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhc
Confidence 99999853 478888777766 374 689999998863111 1122222334332 11 2268999999
Q ss_pred ccCCcEEEe
Q 007802 407 AIKPTMLMG 415 (589)
Q Consensus 407 ~vkPtvLIG 415 (589)
. .||+.-
T Consensus 234 ~--aDvvyt 240 (328)
T 3grf_A 234 G--VDVVYT 240 (328)
T ss_dssp T--CSEEEE
T ss_pred C--CCEEEe
Confidence 7 999974
No 480
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=44.75 E-value=34 Score=33.42 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=24.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|+++++||-||++ ||...++..+.+ .|. +++++|++
T Consensus 5 ~l~gk~vlVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASS---GIGRAAALLFAR-EGA-------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEECCSC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 57889999999754 344445555544 363 58888764
No 481
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=44.72 E-value=28 Score=34.95 Aligned_cols=48 Identities=21% Similarity=0.082 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
.++..+.|++..+. -.+++|+|.|||..|...+.+... .|. + ++.+|+
T Consensus 153 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~-Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKA-----YGA------F-VVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------E-EEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------E-EEEEcC
Confidence 44445566655443 357899999998777666554432 363 3 787775
No 482
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=44.70 E-value=41 Score=33.48 Aligned_cols=101 Identities=14% Similarity=0.192 Sum_probs=56.2
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchh----------chhhhc-ccCC
Q 007802 330 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----------KKPWAH-EHAP 397 (589)
Q Consensus 330 ~riv~~GA-GsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~----------k~~fa~-~~~~ 397 (589)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+..--.. ...+... ...+.. +-.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSFN--TGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSCC--CTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCccccc--hhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 7777777776654 25 36888887521000 0012111 111111 1111
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCC---CcEEEecC
Q 007802 398 IKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNE---KPVIFALS 444 (589)
Q Consensus 398 ~~~L~e~V~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~e---rPIIFaLS 444 (589)
..++.++++.+++|++|=+.+.... -+..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357788888889999988775421 12346666665543 56887544
No 483
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=44.43 E-value=18 Score=37.62 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888653 53 46667665
No 484
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=44.41 E-value=17 Score=38.03 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=27.5
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+.+|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-----LG-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEecC
Confidence 35689999999999999988865 25 368899965
No 485
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=44.30 E-value=45 Score=33.66 Aligned_cols=50 Identities=20% Similarity=0.080 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 312 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 312 ~lAgll~Alr~~g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
.++..+.++.....--.+++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333344455322333357899999999877766654432 253 46887775
No 486
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=44.28 E-value=12 Score=35.19 Aligned_cols=79 Identities=22% Similarity=0.275 Sum_probs=43.3
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----ccCCC-
Q 007802 324 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----EHAPI- 398 (589)
Q Consensus 324 g~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----~~~~~- 398 (589)
..+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. ..-+.
T Consensus 9 ~~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 70 (249)
T 3f9i_A 9 MIDLTGKTSLITGASS---GIGSAIARLLHK-LG-------SKVIISGSNE-------EKLKSLGNALKDNYTIEVCNLA 70 (249)
T ss_dssp CCCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCSSEEEEECCTT
T ss_pred cccCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhccCccEEEcCCC
Confidence 4568899999999754 344445555544 36 3688887641 112222222111 11122
Q ss_pred --CCHHHHHhcc-CCcEEEeecCCC
Q 007802 399 --KSLLDAVKAI-KPTMLMGTSGVG 420 (589)
Q Consensus 399 --~~L~e~V~~v-kPtvLIG~S~~~ 420 (589)
.++.++++.. ++|+||=..+..
T Consensus 71 ~~~~~~~~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 71 NKEECSNLISKTSNLDILVCNAGIT 95 (249)
T ss_dssp SHHHHHHHHHTCSCCSEEEECCC--
T ss_pred CHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3466677665 689999776643
No 487
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=44.25 E-value=16 Score=38.82 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=27.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 328 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 328 ~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 35689999999999999988754 364 588888763
No 488
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=44.06 E-value=36 Score=31.98 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=42.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhhhc----------c
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------E 394 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~fa~----------~ 394 (589)
.+++++++||.||+. ||...++..+.+ .|. +++++|++ . +.+....+.+.. |
T Consensus 5 ~~~~~k~vlITGas~---giG~~~a~~l~~-~G~-------~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 66 (253)
T 3qiv_A 5 MRFENKVGIVTGSGG---GIGQAYAEALAR-EGA-------AVVVADIN----A---EAAEAVAKQIVADGGTAISVAVD 66 (253)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC----H---HHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEcCC----H---HHHHHHHHHHHhcCCcEEEEEcc
Confidence 467889999999743 344444444444 363 58888874 1 112222222111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCC
Q 007802 395 HAPIKSLLDAVKAI-----KPTMLMGTSGV 419 (589)
Q Consensus 395 ~~~~~~L~e~V~~v-----kPtvLIG~S~~ 419 (589)
-.+..++.++++.+ ++|+||=..+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 11113455556554 79999987765
No 489
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=44.04 E-value=19 Score=35.09 Aligned_cols=77 Identities=13% Similarity=0.252 Sum_probs=43.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchh------hhc-ccCCC
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP------WAH-EHAPI 398 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~------fa~-~~~~~ 398 (589)
+|+++++||-||++ ||...++..+.+ .| -+++++|++- . .+...... +.+ |-.+.
T Consensus 13 ~l~gk~vlVTGas~---gIG~~~a~~L~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dl~d~ 74 (291)
T 3rd5_A 13 SFAQRTVVITGANS---GLGAVTARELAR-RG-------ATVIMAVRDT----R---KGEAAARTMAGQVEVRELDLQDL 74 (291)
T ss_dssp CCTTCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----H---HHHHHHTTSSSEEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEECCH----H---HHHHHHHHhcCCeeEEEcCCCCH
Confidence 57889999999753 344455555544 36 3688888751 1 11111111 111 11222
Q ss_pred CCHHHHHhcc-CCcEEEeecCCC
Q 007802 399 KSLLDAVKAI-KPTMLMGTSGVG 420 (589)
Q Consensus 399 ~~L~e~V~~v-kPtvLIG~S~~~ 420 (589)
.++.++++.+ ++|+||=..+..
T Consensus 75 ~~v~~~~~~~~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 75 SSVRRFADGVSGADVLINNAGIM 97 (291)
T ss_dssp HHHHHHHHTCCCEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCcCC
Confidence 3566777766 789999777654
No 490
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=44.01 E-value=19 Score=38.36 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=27.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.-++..|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3456789999999999999988865 365 36666654
No 491
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=43.68 E-value=30 Score=32.94 Aligned_cols=79 Identities=15% Similarity=0.258 Sum_probs=41.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCch-hchhhhc-ccCCCCCHHH
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAH-EHAPIKSLLD 403 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~-~k~~fa~-~~~~~~~L~e 403 (589)
+|+++++||.||++ ||...++..+.+ .|. +++++|++- ++ +.+.. ....+.+ |-.+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EGA-------LVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46788999999753 444445555544 363 588888752 11 10100 0001111 1111234555
Q ss_pred HHhcc-----CCcEEEeecCCC
Q 007802 404 AVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 404 ~V~~v-----kPtvLIG~S~~~ 420 (589)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 56554 799999777643
No 492
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=43.50 E-value=24 Score=37.36 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=26.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007802 329 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 371 (589)
Q Consensus 329 d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD 371 (589)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45899999999999999988651 15 4699999
No 493
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=43.49 E-value=54 Score=31.51 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=26.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|+++++||-||++ ||...++..+.+ +| -+++++|+.+
T Consensus 7 ~~l~~k~~lVTGas~---GIG~a~a~~la~-~G-------~~V~~~~r~~ 45 (277)
T 3tsc_A 7 GKLEGRVAFITGAAR---GQGRAHAVRMAA-EG-------ADIIAVDIAG 45 (277)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred cccCCCEEEEECCcc---HHHHHHHHHHHH-cC-------CEEEEEeccc
Confidence 468899999999754 444455555554 36 3688998854
No 494
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=43.45 E-value=1e+02 Score=30.10 Aligned_cols=38 Identities=18% Similarity=0.320 Sum_probs=26.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.+|+++++||-||++ ||...++..+.+ .| -+++++|++
T Consensus 24 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAAR---GQGRSHAITLAR-EG-------ADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 468899999999864 444455555554 36 368888876
No 495
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=43.41 E-value=18 Score=38.22 Aligned_cols=36 Identities=25% Similarity=0.415 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccC
Q 007802 330 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 374 (589)
Q Consensus 330 ~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 374 (589)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 47999999999999999886530 004 3799999874
No 496
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=43.38 E-value=14 Score=36.10 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=40.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcccCcccCCcccCCchhchhh------hc-ccCC
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW------AH-EHAP 397 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLv~~~r~~~l~~~k~~f------a~-~~~~ 397 (589)
.+|+++++||-||++ ||...|+..+.+ +| -+++++|++. +.+......+ .+ |-.+
T Consensus 25 ~~l~gk~vlVTGas~---gIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d 86 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGA---GIGLAVARRLAD-EG-------CHVLCADIDG-------DAADAAATKIGCGAAACRVDVSD 86 (277)
T ss_dssp --CTTCEEEETTTTS---THHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHCSSCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCcceEEEecCCC
Confidence 357889999999753 333344444444 36 3688888741 1122211111 11 1111
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007802 398 IKSLLDAVKAI-----KPTMLMGTSGVG 420 (589)
Q Consensus 398 ~~~L~e~V~~v-----kPtvLIG~S~~~ 420 (589)
..++.++++.+ ++|+||=..+..
T Consensus 87 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 87 EQQIIAMVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 22455556554 799999776653
No 497
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=43.27 E-value=15 Score=43.64 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=33.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 326 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 326 ~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
+|++.||+++|||.-|+-+++.|+.+ |+.-. -.++|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 46779999999999999999999876 54111 12689999987
No 498
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=43.20 E-value=23 Score=33.13 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 373 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 373 (589)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~k~vlITGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (254)
T 2wsb_A 7 FRLDGACAAVTGAGS---GIGLEICRAFAA-SG-------ARLILIDRE 44 (254)
T ss_dssp TCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999743 344455555544 36 358888874
No 499
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=43.15 E-value=41 Score=34.03 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=25.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007802 325 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 372 (589)
Q Consensus 325 ~~l~d~riv~~GAGsAg~GiA~ll~~~~~~~~G~s~eeA~~~i~~vD~ 372 (589)
.--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33457899999999777766554432 363 57888875
No 500
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=43.09 E-value=45 Score=36.86 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=24.1
Q ss_pred CCCC-ceEEEeCcChHHHHHHHHHHHHHH
Q 007802 326 TLAD-QTFLFLGAGEAGTGIAELIALEMS 353 (589)
Q Consensus 326 ~l~d-~riv~~GAGsAg~GiA~ll~~~~~ 353 (589)
.|++ .||.|+|.|+-|-++|.-|.+++.
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~ 78 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLA 78 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhccc
Confidence 3667 899999999999999999988643
Done!