Query 007805
Match_columns 589
No_of_seqs 512 out of 4045
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 10:56:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 4E-112 1E-116 950.4 59.7 564 8-585 25-605 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 4E-105 1E-109 899.9 58.6 575 1-582 4-589 (725)
3 1wdk_A Fatty oxidation complex 100.0 4E-105 1E-109 899.7 56.2 572 4-582 6-593 (715)
4 3k6j_A Protein F01G10.3, confi 100.0 2.2E-56 7.4E-61 473.5 33.4 273 304-585 50-326 (460)
5 3hrx_A Probable enoyl-COA hydr 100.0 6.9E-56 2.4E-60 440.8 29.4 250 6-295 2-252 (254)
6 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 8.2E-56 2.8E-60 443.7 28.5 254 4-295 15-272 (274)
7 4fzw_A 2,3-dehydroadipyl-COA h 100.0 1.5E-55 5.1E-60 438.3 25.4 250 5-295 6-256 (258)
8 3mog_A Probable 3-hydroxybutyr 100.0 4.1E-54 1.4E-58 463.2 32.2 279 306-584 3-288 (483)
9 3ado_A Lambda-crystallin; L-gu 100.0 9E-55 3.1E-59 441.2 25.4 240 307-546 5-252 (319)
10 3pea_A Enoyl-COA hydratase/iso 100.0 2E-54 6.8E-59 431.2 26.1 255 3-295 5-259 (261)
11 3kqf_A Enoyl-COA hydratase/iso 100.0 2.8E-54 9.5E-59 431.1 26.7 256 1-295 5-263 (265)
12 3i47_A Enoyl COA hydratase/iso 100.0 6E-54 2E-58 428.8 26.5 257 1-296 1-261 (268)
13 3moy_A Probable enoyl-COA hydr 100.0 6.4E-54 2.2E-58 427.7 24.8 254 1-295 6-261 (263)
14 3h81_A Enoyl-COA hydratase ECH 100.0 8.9E-54 3.1E-58 429.1 25.5 254 1-295 22-276 (278)
15 3hin_A Putative 3-hydroxybutyr 100.0 3.9E-54 1.3E-58 431.1 22.6 255 1-296 13-268 (275)
16 3gow_A PAAG, probable enoyl-CO 100.0 6.4E-53 2.2E-57 418.9 29.3 250 6-295 2-252 (254)
17 3fdu_A Putative enoyl-COA hydr 100.0 6.6E-53 2.3E-57 421.1 26.9 253 1-296 1-258 (266)
18 3myb_A Enoyl-COA hydratase; ss 100.0 6.6E-53 2.2E-57 424.9 27.1 257 1-297 22-281 (286)
19 3swx_A Probable enoyl-COA hydr 100.0 2.1E-53 7.1E-58 425.1 23.0 256 1-295 5-263 (265)
20 3g64_A Putative enoyl-COA hydr 100.0 1.2E-52 4.2E-57 422.6 28.3 255 3-295 16-275 (279)
21 3p5m_A Enoyl-COA hydratase/iso 100.0 8.8E-53 3E-57 417.9 26.8 246 4-294 6-252 (255)
22 3lke_A Enoyl-COA hydratase; ny 100.0 3.3E-53 1.1E-57 422.9 23.4 256 1-294 1-262 (263)
23 3sll_A Probable enoyl-COA hydr 100.0 1.2E-52 4.3E-57 424.1 27.9 255 4-296 24-288 (290)
24 3qmj_A Enoyl-COA hydratase, EC 100.0 4.3E-53 1.5E-57 420.9 22.1 251 3-291 5-256 (256)
25 3rsi_A Putative enoyl-COA hydr 100.0 2.3E-52 8E-57 417.5 27.2 253 1-295 5-263 (265)
26 1nzy_A Dehalogenase, 4-chlorob 100.0 1.2E-52 4.2E-57 420.6 25.1 257 1-296 1-262 (269)
27 1zcj_A Peroxisomal bifunctiona 100.0 2.5E-52 8.6E-57 449.5 29.0 307 275-583 1-324 (463)
28 2ppy_A Enoyl-COA hydratase; be 100.0 4.3E-52 1.5E-56 415.8 28.6 252 3-294 8-262 (265)
29 3qxz_A Enoyl-COA hydratase/iso 100.0 3.5E-53 1.2E-57 423.1 20.6 253 3-295 6-262 (265)
30 2ej5_A Enoyl-COA hydratase sub 100.0 3E-52 1E-56 415.1 26.7 250 4-294 3-254 (257)
31 2pbp_A Enoyl-COA hydratase sub 100.0 3.4E-52 1.2E-56 414.9 26.8 253 1-294 1-255 (258)
32 3gkb_A Putative enoyl-COA hydr 100.0 1.5E-52 5E-57 422.2 24.0 251 3-294 8-266 (287)
33 4e12_A Diketoreductase; oxidor 100.0 2.2E-52 7.5E-57 423.1 25.2 273 306-581 2-283 (283)
34 3trr_A Probable enoyl-COA hydr 100.0 2.8E-52 9.7E-57 414.2 25.0 249 1-295 5-254 (256)
35 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 1.4E-52 4.8E-57 422.0 23.0 256 307-584 11-274 (293)
36 3tlf_A Enoyl-COA hydratase/iso 100.0 1.4E-52 4.7E-57 421.4 22.8 252 4-295 11-272 (274)
37 4hdt_A 3-hydroxyisobutyryl-COA 100.0 5.7E-52 1.9E-56 429.3 27.9 292 3-297 8-325 (353)
38 1ef8_A Methylmalonyl COA decar 100.0 3.9E-52 1.3E-56 415.2 25.2 253 1-294 1-258 (261)
39 3qre_A Enoyl-COA hydratase, EC 100.0 4.4E-53 1.5E-57 428.3 17.6 256 3-296 28-293 (298)
40 2vx2_A Enoyl-COA hydratase dom 100.0 6.9E-52 2.4E-56 417.7 25.4 253 3-294 32-285 (287)
41 1wz8_A Enoyl-COA hydratase; ly 100.0 6.1E-52 2.1E-56 414.2 24.2 253 3-294 9-263 (264)
42 3hp0_A Putative polyketide bio 100.0 1.2E-51 4.2E-56 411.5 26.2 253 1-296 4-258 (267)
43 1dci_A Dienoyl-COA isomerase; 100.0 2.1E-51 7.4E-56 413.2 27.9 255 3-294 2-272 (275)
44 3r9t_A ECHA1_1; ssgcid, seattl 100.0 3.7E-52 1.3E-56 416.0 22.1 253 3-295 8-265 (267)
45 4eml_A Naphthoate synthase; 1, 100.0 9.3E-52 3.2E-56 414.5 25.0 254 3-295 9-269 (275)
46 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 6.7E-51 2.3E-55 416.4 31.8 279 304-582 11-302 (302)
47 3r9q_A Enoyl-COA hydratase/iso 100.0 3.8E-52 1.3E-56 414.4 21.8 249 4-295 11-260 (262)
48 4f47_A Enoyl-COA hydratase ECH 100.0 4.6E-52 1.6E-56 418.3 22.6 254 3-295 19-276 (278)
49 3qxi_A Enoyl-COA hydratase ECH 100.0 1.2E-51 4.2E-56 411.7 23.8 250 2-295 13-263 (265)
50 3qk8_A Enoyl-COA hydratase ECH 100.0 4.2E-52 1.4E-56 416.7 20.1 252 3-295 12-267 (272)
51 2f6q_A Peroxisomal 3,2-trans-e 100.0 1.9E-51 6.4E-56 413.7 24.1 252 2-292 24-279 (280)
52 2uzf_A Naphthoate synthase; ly 100.0 5.4E-51 1.8E-55 409.1 27.0 252 3-295 12-267 (273)
53 2j5i_A P-hydroxycinnamoyl COA 100.0 3E-51 1E-55 411.6 24.2 255 3-294 8-271 (276)
54 3t89_A 1,4-dihydroxy-2-naphtho 100.0 4E-51 1.4E-55 412.2 25.0 257 1-296 24-284 (289)
55 3rrv_A Enoyl-COA hydratase/iso 100.0 2.6E-51 9.1E-56 411.1 23.4 247 4-290 28-276 (276)
56 2fbm_A Y chromosome chromodoma 100.0 1.7E-51 5.6E-56 415.4 22.0 256 2-296 21-282 (291)
57 1sg4_A 3,2-trans-enoyl-COA iso 100.0 1.2E-51 4E-56 411.3 20.3 251 6-294 5-259 (260)
58 2gtr_A CDY-like, chromodomain 100.0 2.3E-51 8E-56 409.5 22.2 253 3-294 4-261 (261)
59 3oc7_A Enoyl-COA hydratase; se 100.0 7E-51 2.4E-55 407.4 25.0 252 1-294 5-265 (267)
60 2a7k_A CARB; crotonase, antibi 100.0 4E-51 1.4E-55 405.4 22.4 247 6-291 2-250 (250)
61 3lao_A Enoyl-COA hydratase/iso 100.0 1.3E-51 4.4E-56 410.5 18.8 247 2-287 10-258 (258)
62 1uiy_A Enoyl-COA hydratase; ly 100.0 6.7E-51 2.3E-55 404.6 23.9 248 6-293 2-252 (253)
63 3h0u_A Putative enoyl-COA hydr 100.0 1.1E-50 3.7E-55 409.1 25.2 247 3-288 7-257 (289)
64 1mj3_A Enoyl-COA hydratase, mi 100.0 6.2E-51 2.1E-55 406.0 23.0 253 2-294 2-257 (260)
65 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 3.3E-51 1.1E-55 419.1 21.3 255 3-295 54-328 (334)
66 3pe8_A Enoyl-COA hydratase; em 100.0 3.3E-51 1.1E-55 405.9 19.5 244 3-294 8-255 (256)
67 3l3s_A Enoyl-COA hydratase/iso 100.0 1.3E-50 4.4E-55 404.1 23.6 251 1-289 3-258 (263)
68 3he2_A Enoyl-COA hydratase ECH 100.0 2.3E-50 7.7E-55 400.7 22.7 242 3-295 20-262 (264)
69 4di1_A Enoyl-COA hydratase ECH 100.0 3.4E-50 1.2E-54 402.6 24.0 243 1-293 22-264 (277)
70 1hzd_A AUH, AU-binding protein 100.0 7.3E-50 2.5E-54 400.7 21.4 253 4-294 8-269 (272)
71 3bpt_A 3-hydroxyisobutyryl-COA 100.0 5.3E-49 1.8E-53 409.3 25.4 290 3-296 5-331 (363)
72 3isa_A Putative enoyl-COA hydr 100.0 2.7E-49 9.1E-54 392.6 21.1 243 4-296 7-250 (254)
73 2q35_A CURF; crotonase, lyase; 100.0 4.1E-49 1.4E-53 388.7 19.7 238 6-287 5-243 (243)
74 1pjh_A Enoyl-COA isomerase; EC 100.0 1.2E-48 4E-53 393.8 22.2 245 1-295 6-268 (280)
75 3ju1_A Enoyl-COA hydratase/iso 100.0 3.1E-49 1.1E-53 415.0 18.7 286 4-296 42-376 (407)
76 3r6h_A Enoyl-COA hydratase, EC 100.0 5.7E-48 1.9E-52 378.1 20.2 229 1-270 3-231 (233)
77 2j5g_A ALR4455 protein; enzyme 100.0 8.2E-48 2.8E-52 382.8 20.7 238 3-290 22-262 (263)
78 3ot6_A Enoyl-COA hydratase/iso 100.0 1.5E-47 5.1E-52 374.9 18.1 225 4-270 6-231 (232)
79 3m6n_A RPFF protein; enoyl-COA 100.0 3.5E-46 1.2E-50 379.3 25.3 254 3-294 29-299 (305)
80 3njd_A Enoyl-COA hydratase; ss 100.0 6.9E-46 2.3E-50 381.8 25.6 204 1-209 32-265 (333)
81 1szo_A 6-oxocamphor hydrolase; 100.0 6.9E-46 2.4E-50 368.2 21.7 237 4-291 16-254 (257)
82 2np9_A DPGC; protein inhibitor 100.0 9E-46 3.1E-50 387.9 20.8 246 4-292 167-440 (440)
83 2dpo_A L-gulonate 3-dehydrogen 100.0 4.9E-45 1.7E-49 372.9 25.4 263 306-569 4-282 (319)
84 3t3w_A Enoyl-COA hydratase; ss 100.0 2.8E-45 9.5E-50 368.6 22.0 205 1-209 17-226 (279)
85 2w3p_A Benzoyl-COA-dihydrodiol 100.0 6.4E-41 2.2E-45 353.1 16.0 275 3-294 20-329 (556)
86 3mog_A Probable 3-hydroxybutyr 99.9 3.8E-24 1.3E-28 230.1 15.9 149 421-575 323-474 (483)
87 3ctv_A HBD-10, 3-hydroxyacyl-C 99.9 2.7E-23 9.4E-28 178.2 4.5 98 478-575 3-104 (110)
88 3bf0_A Protease 4; bacterial, 99.8 3.2E-21 1.1E-25 212.6 7.9 169 12-198 300-516 (593)
89 2ewd_A Lactate dehydrogenase,; 99.8 7.4E-21 2.5E-25 194.9 8.8 206 309-550 5-240 (317)
90 3rst_A Signal peptide peptidas 99.8 2.7E-19 9.4E-24 175.2 15.5 167 12-197 2-224 (240)
91 3tri_A Pyrroline-5-carboxylate 99.8 4.6E-19 1.6E-23 178.2 16.5 188 308-522 3-206 (280)
92 3d1l_A Putative NADP oxidoredu 99.8 3.6E-19 1.2E-23 177.8 11.0 211 309-549 11-247 (266)
93 3viv_A 441AA long hypothetical 99.8 1.4E-18 4.8E-23 167.4 14.6 152 12-190 7-179 (230)
94 3ggo_A Prephenate dehydrogenas 99.8 8.9E-18 3E-22 171.4 17.3 166 306-497 31-215 (314)
95 3gt0_A Pyrroline-5-carboxylate 99.8 2.2E-18 7.5E-23 170.2 11.4 189 308-522 2-204 (247)
96 3obb_A Probable 3-hydroxyisobu 99.7 6.8E-18 2.3E-22 170.8 10.7 189 307-526 2-213 (300)
97 2h78_A Hibadh, 3-hydroxyisobut 99.7 2.1E-17 7.1E-22 168.2 14.2 191 307-526 2-213 (302)
98 2i76_A Hypothetical protein; N 99.7 1.9E-17 6.6E-22 166.1 9.7 210 309-554 3-240 (276)
99 3g0o_A 3-hydroxyisobutyrate de 99.7 1.2E-16 4.3E-21 162.5 15.3 192 308-526 7-219 (303)
100 3doj_A AT3G25530, dehydrogenas 99.7 2.4E-17 8.2E-22 168.3 9.9 193 305-526 18-231 (310)
101 3qha_A Putative oxidoreductase 99.7 3.4E-17 1.2E-21 166.0 10.7 185 308-522 15-222 (296)
102 3qsg_A NAD-binding phosphogluc 99.7 2.2E-17 7.5E-22 168.6 7.5 189 306-525 22-231 (312)
103 4gbj_A 6-phosphogluconate dehy 99.7 3.6E-17 1.2E-21 165.5 8.5 191 309-526 6-214 (297)
104 3pdu_A 3-hydroxyisobutyrate de 99.7 2.5E-17 8.4E-22 166.4 7.1 191 308-526 1-211 (287)
105 3pef_A 6-phosphogluconate dehy 99.7 9.9E-17 3.4E-21 161.9 11.0 189 309-526 2-211 (287)
106 3dfu_A Uncharacterized protein 99.7 5.8E-17 2E-21 156.1 8.6 157 308-517 6-172 (232)
107 4dll_A 2-hydroxy-3-oxopropiona 99.7 1.5E-16 5.3E-21 163.0 11.7 190 307-526 30-239 (320)
108 3c24_A Putative oxidoreductase 99.6 1.1E-15 3.7E-20 154.3 14.1 188 308-522 11-228 (286)
109 2izz_A Pyrroline-5-carboxylate 99.6 1.1E-15 3.9E-20 156.7 13.3 189 307-522 21-228 (322)
110 3ktd_A Prephenate dehydrogenas 99.6 9.7E-16 3.3E-20 157.3 10.6 160 307-494 7-194 (341)
111 2y0c_A BCEC, UDP-glucose dehyd 99.6 1.5E-15 5.2E-20 163.4 9.9 204 309-522 9-257 (478)
112 3b1f_A Putative prephenate deh 99.6 7.7E-15 2.6E-19 148.2 14.0 159 306-488 4-181 (290)
113 1yqg_A Pyrroline-5-carboxylate 99.6 1.5E-14 5.1E-19 143.9 15.7 182 309-522 1-196 (263)
114 3l6d_A Putative oxidoreductase 99.6 2.7E-15 9.2E-20 152.7 9.9 189 307-524 8-214 (306)
115 4ezb_A Uncharacterized conserv 99.6 1.7E-14 5.7E-19 147.5 15.8 193 308-525 24-233 (317)
116 2uyy_A N-PAC protein; long-cha 99.6 1.9E-15 6.4E-20 154.7 7.3 186 308-522 30-235 (316)
117 2f9y_B Acetyl-coenzyme A carbo 99.6 1.4E-14 5E-19 145.4 12.1 157 15-204 120-281 (304)
118 1zcj_A Peroxisomal bifunctiona 99.5 3.5E-15 1.2E-19 160.2 7.7 112 462-579 330-449 (463)
119 2g5c_A Prephenate dehydrogenas 99.5 7.3E-14 2.5E-18 140.4 16.9 155 308-488 1-173 (281)
120 2f1k_A Prephenate dehydrogenas 99.5 6E-14 2.1E-18 140.8 16.2 164 309-497 1-177 (279)
121 2ahr_A Putative pyrroline carb 99.5 4.9E-14 1.7E-18 139.9 14.0 184 308-522 3-197 (259)
122 1y7o_A ATP-dependent CLP prote 99.5 2.1E-14 7.1E-19 138.0 10.7 140 27-188 53-214 (218)
123 1vpd_A Tartronate semialdehyde 99.5 2.1E-14 7.2E-19 145.6 11.1 187 309-522 6-210 (299)
124 3cky_A 2-hydroxymethyl glutara 99.5 3E-14 1E-18 144.6 12.0 186 309-522 5-209 (301)
125 3g79_A NDP-N-acetyl-D-galactos 99.5 2.6E-14 8.9E-19 152.6 11.4 205 307-525 17-274 (478)
126 4e21_A 6-phosphogluconate dehy 99.5 7.1E-14 2.4E-18 144.7 14.4 185 308-522 22-269 (358)
127 2ew2_A 2-dehydropantoate 2-red 99.5 1.9E-13 6.6E-18 139.3 16.5 201 308-522 3-249 (316)
128 2gf2_A Hibadh, 3-hydroxyisobut 99.5 8.8E-15 3E-19 148.2 6.5 184 310-525 2-209 (296)
129 4huj_A Uncharacterized protein 99.5 2.7E-14 9.2E-19 138.2 8.5 154 306-488 21-198 (220)
130 1yb4_A Tartronic semialdehyde 99.5 1.6E-14 5.6E-19 146.1 6.6 182 308-522 3-207 (295)
131 3k96_A Glycerol-3-phosphate de 99.5 6.4E-14 2.2E-18 145.1 11.0 197 307-518 28-261 (356)
132 2pv7_A T-protein [includes: ch 99.5 9.5E-14 3.3E-18 140.7 11.7 139 307-487 20-165 (298)
133 2rcy_A Pyrroline carboxylate r 99.5 1.3E-13 4.5E-18 137.0 12.1 180 308-522 4-198 (262)
134 2q3e_A UDP-glucose 6-dehydroge 99.5 1.6E-13 5.6E-18 147.6 13.6 202 308-522 5-256 (467)
135 1mv8_A GMD, GDP-mannose 6-dehy 99.5 9.5E-14 3.2E-18 148.3 11.2 198 309-522 1-245 (436)
136 4a7p_A UDP-glucose dehydrogena 99.5 3.4E-13 1.2E-17 143.2 15.3 197 309-522 9-251 (446)
137 3gg2_A Sugar dehydrogenase, UD 99.5 4.5E-13 1.5E-17 143.0 15.9 203 309-522 3-247 (450)
138 2zyd_A 6-phosphogluconate dehy 99.5 1.7E-13 5.7E-18 147.5 11.6 192 306-522 13-231 (480)
139 2p4q_A 6-phosphogluconate dehy 99.5 9.2E-14 3.2E-18 149.9 9.1 190 309-522 11-226 (497)
140 4gwg_A 6-phosphogluconate dehy 99.4 2.2E-13 7.5E-18 145.7 11.6 192 307-522 3-221 (484)
141 3ojo_A CAP5O; rossmann fold, c 99.4 3.4E-13 1.2E-17 142.1 12.6 195 308-522 11-250 (431)
142 2cvz_A Dehydrogenase, 3-hydrox 99.4 1.6E-13 5.3E-18 138.4 9.5 184 308-522 1-200 (289)
143 1np3_A Ketol-acid reductoisome 99.4 1.4E-13 4.9E-18 141.8 9.2 235 308-575 16-298 (338)
144 3pid_A UDP-glucose 6-dehydroge 99.4 6.2E-13 2.1E-17 140.0 14.0 197 306-522 34-268 (432)
145 2o3j_A UDP-glucose 6-dehydroge 99.4 3E-13 1E-17 145.9 11.5 201 306-522 7-262 (481)
146 2iz1_A 6-phosphogluconate dehy 99.4 5.7E-13 1.9E-17 143.5 13.6 190 308-522 5-222 (474)
147 2f9i_A Acetyl-coenzyme A carbo 99.4 1.5E-12 5.1E-17 131.9 13.8 138 26-186 139-276 (327)
148 1i36_A Conserved hypothetical 99.4 1.7E-12 5.7E-17 129.1 12.4 178 310-526 2-198 (264)
149 1jay_A Coenzyme F420H2:NADP+ o 99.4 8.9E-13 3E-17 126.6 9.7 157 309-488 1-181 (212)
150 2f9y_A Acetyl-COA carboxylase, 99.4 2.2E-12 7.4E-17 131.1 12.3 138 26-186 153-290 (339)
151 3dtt_A NADP oxidoreductase; st 99.4 3.2E-12 1.1E-16 125.7 11.8 166 306-488 17-213 (245)
152 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 2.9E-12 1E-16 137.9 11.7 192 310-522 3-220 (478)
153 2raf_A Putative dinucleotide-b 99.3 2.1E-12 7.1E-17 123.8 8.8 135 307-488 18-176 (209)
154 1evy_A Glycerol-3-phosphate de 99.3 1.4E-12 4.8E-17 136.1 7.7 199 306-517 13-254 (366)
155 2pgd_A 6-phosphogluconate dehy 99.3 2.9E-12 9.9E-17 138.3 9.7 190 309-522 3-219 (482)
156 2vns_A Metalloreductase steap3 99.3 1.7E-12 5.8E-17 125.0 6.5 148 307-488 27-194 (215)
157 3vtf_A UDP-glucose 6-dehydroge 99.3 1.8E-11 6.2E-16 128.8 14.4 199 307-522 20-263 (444)
158 2hjr_A Malate dehydrogenase; m 99.3 5.4E-12 1.9E-16 129.2 9.1 122 309-444 15-155 (328)
159 1x0v_A GPD-C, GPDH-C, glycerol 99.3 4.5E-12 1.5E-16 131.6 7.6 199 306-518 6-257 (354)
160 3fr7_A Putative ketol-acid red 99.3 2.4E-12 8.4E-17 134.5 5.1 154 308-484 54-232 (525)
161 3zwc_A Peroxisomal bifunctiona 99.2 1E-11 3.5E-16 139.3 9.3 91 493-583 638-739 (742)
162 1t2d_A LDH-P, L-lactate dehydr 99.2 1.4E-11 4.8E-16 125.7 8.6 123 308-444 4-150 (322)
163 1dlj_A UDP-glucose dehydrogena 99.2 3.7E-11 1.3E-15 126.6 11.6 199 309-522 1-239 (402)
164 1yj8_A Glycerol-3-phosphate de 99.2 1.2E-11 4.2E-16 129.4 7.9 197 308-518 21-273 (375)
165 1ks9_A KPA reductase;, 2-dehyd 99.2 6.5E-12 2.2E-16 126.4 4.9 163 309-493 1-173 (291)
166 1txg_A Glycerol-3-phosphate de 99.2 6.4E-11 2.2E-15 121.8 11.5 191 310-518 2-242 (335)
167 1z82_A Glycerol-3-phosphate de 99.2 6.5E-11 2.2E-15 121.9 11.4 187 309-518 15-236 (335)
168 1pzg_A LDH, lactate dehydrogen 99.2 2.6E-11 8.9E-16 124.3 7.6 122 309-444 10-156 (331)
169 3k6j_A Protein F01G10.3, confi 99.2 8E-12 2.7E-16 132.4 3.7 86 490-575 355-448 (460)
170 3hwr_A 2-dehydropantoate 2-red 99.1 1.5E-10 5E-15 118.3 11.5 174 307-500 18-201 (318)
171 2qyt_A 2-dehydropantoate 2-red 99.1 5.8E-11 2E-15 121.1 7.8 166 308-488 8-193 (317)
172 1a5z_A L-lactate dehydrogenase 99.1 8.9E-11 3E-15 119.9 7.8 159 309-504 1-182 (319)
173 2yjz_A Metalloreductase steap4 98.7 8.5E-12 2.9E-16 118.6 0.0 149 308-488 19-182 (201)
174 2i6t_A Ubiquitin-conjugating e 99.1 1.1E-10 3.6E-15 118.0 6.9 122 304-444 10-149 (303)
175 2wtb_A MFP2, fatty acid multif 99.1 1.2E-10 4E-15 131.4 7.6 87 490-580 624-716 (725)
176 1wdk_A Fatty oxidation complex 99.1 1.4E-10 4.7E-15 130.7 7.8 86 490-580 624-715 (715)
177 3ghy_A Ketopantoate reductase 99.0 4.9E-10 1.7E-14 115.3 10.7 169 307-491 2-201 (335)
178 3hn2_A 2-dehydropantoate 2-red 99.0 1.7E-09 5.8E-14 110.1 12.9 173 309-497 3-187 (312)
179 2cby_A ATP-dependent CLP prote 99.0 1.1E-09 3.9E-14 104.2 9.7 143 27-193 35-200 (208)
180 1ur5_A Malate dehydrogenase; o 99.0 1.1E-09 3.7E-14 111.2 9.0 99 309-420 3-116 (309)
181 2v6b_A L-LDH, L-lactate dehydr 98.9 1.2E-09 4.1E-14 110.6 6.6 120 309-444 1-138 (304)
182 3i83_A 2-dehydropantoate 2-red 98.9 3.3E-09 1.1E-13 108.3 9.8 166 309-491 3-183 (320)
183 2w2k_A D-mandelate dehydrogena 98.9 1.1E-09 3.8E-14 112.8 5.6 117 309-449 164-285 (348)
184 2gcg_A Glyoxylate reductase/hy 98.9 2.6E-09 8.8E-14 109.4 7.4 118 308-450 155-276 (330)
185 2d4a_B Malate dehydrogenase; a 98.8 8.4E-09 2.9E-13 104.4 9.1 120 310-444 1-140 (308)
186 3gvi_A Malate dehydrogenase; N 98.8 1.3E-08 4.6E-13 103.3 10.3 105 306-423 5-124 (324)
187 2dbq_A Glyoxylate reductase; D 98.8 2.9E-09 9.9E-14 109.2 4.9 115 308-448 150-268 (334)
188 3tl2_A Malate dehydrogenase; c 98.8 1.6E-08 5.6E-13 102.3 10.3 106 305-423 5-127 (315)
189 1hyh_A L-hicdh, L-2-hydroxyiso 98.8 1.9E-08 6.5E-13 102.1 10.5 99 308-421 1-120 (309)
190 3p7m_A Malate dehydrogenase; p 98.8 1.2E-08 4E-13 103.8 8.6 104 306-422 3-121 (321)
191 2d0i_A Dehydrogenase; structur 98.8 3.2E-09 1.1E-13 108.7 4.1 113 309-448 147-263 (333)
192 3ba1_A HPPR, hydroxyphenylpyru 98.8 3.3E-09 1.1E-13 108.3 4.2 111 309-448 165-279 (333)
193 3ldh_A Lactate dehydrogenase; 98.7 1.1E-08 3.7E-13 103.8 7.7 102 307-422 20-137 (330)
194 3c7a_A Octopine dehydrogenase; 98.7 1.2E-08 4E-13 107.7 8.1 108 308-427 2-120 (404)
195 1ygy_A PGDH, D-3-phosphoglycer 98.7 6.2E-09 2.1E-13 113.3 6.0 150 308-483 142-308 (529)
196 1guz_A Malate dehydrogenase; o 98.7 4.5E-08 1.5E-12 99.3 12.0 100 309-421 1-116 (310)
197 1lld_A L-lactate dehydrogenase 98.7 5.1E-08 1.8E-12 99.3 12.4 107 308-428 7-129 (319)
198 1bg6_A N-(1-D-carboxylethyl)-L 98.7 2.7E-08 9.1E-13 103.1 9.7 104 308-423 4-109 (359)
199 1ldn_A L-lactate dehydrogenase 98.7 1.9E-08 6.5E-13 102.3 7.5 100 307-420 5-120 (316)
200 4fgw_A Glycerol-3-phosphate de 98.7 3.2E-09 1.1E-13 110.1 1.5 110 308-427 34-155 (391)
201 3gvx_A Glycerate dehydrogenase 98.7 1.2E-08 4E-13 102.0 5.3 124 309-461 123-255 (290)
202 1gdh_A D-glycerate dehydrogena 98.6 3E-08 1E-12 100.9 7.4 139 309-473 147-299 (320)
203 1obb_A Maltase, alpha-glucosid 98.6 1E-07 3.5E-12 101.4 11.6 77 308-396 3-86 (480)
204 3g17_A Similar to 2-dehydropan 98.6 3.5E-09 1.2E-13 106.8 -1.0 164 309-501 3-174 (294)
205 3ego_A Probable 2-dehydropanto 98.6 1.7E-07 5.9E-12 94.9 10.7 116 309-443 3-119 (307)
206 1oju_A MDH, malate dehydrogena 98.6 1.9E-07 6.6E-12 93.5 10.5 102 309-423 1-118 (294)
207 3jtm_A Formate dehydrogenase, 98.5 6.7E-08 2.3E-12 99.2 6.6 138 309-471 165-316 (351)
208 1qp8_A Formate dehydrogenase; 98.5 2.6E-07 8.9E-12 93.1 10.7 134 308-471 124-273 (303)
209 3evt_A Phosphoglycerate dehydr 98.5 1E-07 3.6E-12 96.7 7.4 128 309-462 138-277 (324)
210 1wwk_A Phosphoglycerate dehydr 98.5 3.2E-08 1.1E-12 100.1 3.4 138 309-472 143-293 (307)
211 4dgs_A Dehydrogenase; structur 98.5 8.8E-08 3E-12 97.8 6.1 99 309-436 172-273 (340)
212 2ekl_A D-3-phosphoglycerate de 98.5 7.6E-08 2.6E-12 97.6 5.1 103 308-436 142-247 (313)
213 3qwd_A ATP-dependent CLP prote 98.5 7.8E-07 2.7E-11 83.8 11.5 137 27-187 35-193 (203)
214 2w3p_A Benzoyl-COA-dihydrodiol 98.5 1.1E-06 3.9E-11 93.1 13.7 201 3-211 265-500 (556)
215 2g76_A 3-PGDH, D-3-phosphoglyc 98.5 5E-08 1.7E-12 99.7 3.1 101 309-435 166-269 (335)
216 3nep_X Malate dehydrogenase; h 98.5 3.4E-07 1.2E-11 92.5 9.0 102 309-423 1-118 (314)
217 3gg9_A D-3-phosphoglycerate de 98.5 2.1E-07 7.1E-12 95.6 7.5 137 309-470 161-310 (352)
218 2f6i_A ATP-dependent CLP prote 98.5 5.9E-07 2E-11 85.6 10.1 138 27-186 47-203 (215)
219 1yg6_A ATP-dependent CLP prote 98.4 4.2E-07 1.4E-11 85.4 8.6 136 27-186 34-191 (193)
220 3k5p_A D-3-phosphoglycerate de 98.4 4.6E-07 1.6E-11 94.5 9.7 133 309-470 157-307 (416)
221 3hg7_A D-isomer specific 2-hyd 98.4 1.1E-07 3.8E-12 96.4 4.8 128 309-462 141-280 (324)
222 2nac_A NAD-dependent formate d 98.4 7.9E-08 2.7E-12 100.0 3.4 130 309-463 192-334 (393)
223 3fef_A Putative glucosidase LP 98.4 5E-07 1.7E-11 95.4 9.5 72 309-396 6-84 (450)
224 1u8x_X Maltose-6'-phosphate gl 98.4 8.3E-07 2.8E-11 94.6 11.1 77 309-397 29-112 (472)
225 4aj2_A L-lactate dehydrogenase 98.4 4.5E-07 1.5E-11 92.2 8.6 104 306-423 17-136 (331)
226 3pqe_A L-LDH, L-lactate dehydr 98.4 4.9E-07 1.7E-11 91.9 8.7 102 307-423 4-122 (326)
227 1sc6_A PGDH, D-3-phosphoglycer 98.4 3.2E-07 1.1E-11 96.0 7.0 126 309-463 146-288 (404)
228 4g2n_A D-isomer specific 2-hyd 98.4 3.3E-07 1.1E-11 93.7 6.7 101 309-435 174-277 (345)
229 2cuk_A Glycerate dehydrogenase 98.4 1.5E-07 5.1E-12 95.3 3.9 131 308-469 144-286 (311)
230 1mx3_A CTBP1, C-terminal bindi 98.4 2.1E-07 7.3E-12 95.4 5.0 102 309-435 169-273 (347)
231 4hy3_A Phosphoglycerate oxidor 98.4 6.9E-07 2.4E-11 91.9 8.7 138 309-472 177-326 (365)
232 1tg6_A Putative ATP-dependent 98.3 1.4E-06 4.7E-11 85.5 9.8 139 27-186 90-247 (277)
233 4e5n_A Thermostable phosphite 98.3 1.8E-07 6.3E-12 95.3 3.4 103 308-435 145-250 (330)
234 3pp8_A Glyoxylate/hydroxypyruv 98.3 1E-07 3.6E-12 96.4 1.3 101 309-435 140-243 (315)
235 2pi1_A D-lactate dehydrogenase 98.3 1.6E-07 5.3E-12 96.0 2.4 101 309-436 142-245 (334)
236 3d0o_A L-LDH 1, L-lactate dehy 98.3 2.7E-06 9.3E-11 86.3 10.6 109 308-432 6-130 (317)
237 1j4a_A D-LDH, D-lactate dehydr 98.3 3.2E-07 1.1E-11 93.8 3.6 101 309-436 147-250 (333)
238 2j6i_A Formate dehydrogenase; 98.3 2E-07 6.9E-12 96.4 1.9 103 309-435 165-271 (364)
239 3p2l_A ATP-dependent CLP prote 98.3 1.2E-06 4.1E-11 82.4 6.8 136 27-186 38-195 (201)
240 2yq5_A D-isomer specific 2-hyd 98.2 1.8E-07 6.3E-12 95.6 1.1 99 309-435 149-250 (343)
241 3fi9_A Malate dehydrogenase; s 98.2 1.1E-06 3.9E-11 89.7 6.5 97 306-417 6-120 (343)
242 2i99_A MU-crystallin homolog; 98.2 1.1E-06 3.7E-11 89.2 6.1 89 309-424 136-227 (312)
243 3llv_A Exopolyphosphatase-rela 98.2 1E-05 3.5E-10 71.6 11.5 107 307-431 5-112 (141)
244 2x0j_A Malate dehydrogenase; o 98.2 4.9E-06 1.7E-10 83.1 10.4 102 309-423 1-118 (294)
245 3vku_A L-LDH, L-lactate dehydr 98.2 2.5E-06 8.6E-11 86.5 7.9 101 307-423 8-125 (326)
246 1lss_A TRK system potassium up 98.2 1.3E-05 4.3E-10 70.5 11.5 98 309-423 5-103 (140)
247 1s6y_A 6-phospho-beta-glucosid 98.2 6.8E-06 2.3E-10 87.1 11.1 100 309-421 8-150 (450)
248 3oet_A Erythronate-4-phosphate 98.1 3.8E-07 1.3E-11 94.1 0.4 109 309-446 120-236 (381)
249 1y6j_A L-lactate dehydrogenase 98.1 2.3E-06 7.7E-11 86.9 6.0 106 308-431 7-129 (318)
250 1ez4_A Lactate dehydrogenase; 98.1 7.3E-06 2.5E-10 83.1 9.5 97 309-421 6-119 (318)
251 3oj0_A Glutr, glutamyl-tRNA re 98.1 1.1E-06 3.7E-11 78.4 2.8 69 309-398 22-91 (144)
252 2zqz_A L-LDH, L-lactate dehydr 98.1 8.5E-06 2.9E-10 82.9 9.3 98 308-421 9-123 (326)
253 2o4c_A Erythronate-4-phosphate 98.1 5.6E-07 1.9E-11 93.0 0.4 99 309-436 117-222 (380)
254 2xxj_A L-LDH, L-lactate dehydr 98.1 8.6E-06 2.9E-10 82.3 8.8 98 309-421 1-114 (310)
255 1dxy_A D-2-hydroxyisocaproate 98.0 6.5E-07 2.2E-11 91.5 0.4 100 309-436 146-248 (333)
256 4gm2_A ATP-dependent CLP prote 98.0 2.3E-05 8E-10 73.4 10.0 144 27-187 36-205 (205)
257 1pix_A Glutaconyl-COA decarbox 98.0 3.3E-05 1.1E-09 83.8 12.5 158 25-204 118-286 (587)
258 2hk9_A Shikimate dehydrogenase 98.0 1.9E-06 6.6E-11 85.7 1.9 91 309-424 130-222 (275)
259 3ic5_A Putative saccharopine d 98.0 2.5E-05 8.5E-10 66.3 8.6 40 308-347 5-45 (118)
260 3c85_A Putative glutathione-re 97.9 3.2E-05 1.1E-09 71.7 10.0 39 309-347 40-79 (183)
261 3fwz_A Inner membrane protein 97.9 4.7E-05 1.6E-09 67.3 10.5 40 308-347 7-46 (140)
262 1y81_A Conserved hypothetical 97.9 1.7E-05 5.8E-10 70.0 7.4 83 307-421 13-100 (138)
263 1xdw_A NAD+-dependent (R)-2-hy 97.9 8.9E-07 3E-11 90.4 -1.1 101 308-436 146-249 (331)
264 3d4o_A Dipicolinate synthase s 97.9 1.6E-05 5.4E-10 79.8 6.8 89 309-424 156-245 (293)
265 2rir_A Dipicolinate synthase, 97.9 1.4E-05 4.8E-10 80.5 6.4 89 309-424 158-247 (300)
266 2duw_A Putative COA-binding pr 97.8 1.6E-05 5.6E-10 70.8 5.4 101 309-443 14-122 (145)
267 1mld_A Malate dehydrogenase; o 97.8 9.3E-05 3.2E-09 74.8 11.6 94 309-421 1-115 (314)
268 2g1u_A Hypothetical protein TM 97.8 3.3E-05 1.1E-09 69.5 7.4 38 309-346 20-57 (155)
269 3bf0_A Protease 4; bacterial, 97.8 0.00012 4E-09 80.6 12.8 144 32-194 71-271 (593)
270 2hmt_A YUAA protein; RCK, KTN, 97.8 6.2E-05 2.1E-09 66.2 8.0 98 308-423 6-105 (144)
271 1o6z_A MDH, malate dehydrogena 97.7 8.2E-05 2.8E-09 74.9 9.5 98 309-421 1-117 (303)
272 1smk_A Malate dehydrogenase, g 97.7 7.8E-05 2.7E-09 75.8 9.3 102 308-430 8-130 (326)
273 2d5c_A AROE, shikimate 5-dehyd 97.7 5E-05 1.7E-09 74.8 7.2 64 310-398 118-182 (263)
274 3q2i_A Dehydrogenase; rossmann 97.7 0.00037 1.3E-08 71.6 13.5 72 306-400 11-88 (354)
275 3d64_A Adenosylhomocysteinase; 97.6 2.6E-05 8.9E-10 83.0 4.5 88 309-425 278-366 (494)
276 1v8b_A Adenosylhomocysteinase; 97.6 2.1E-05 7.2E-10 83.4 3.4 96 309-433 258-357 (479)
277 1up7_A 6-phospho-beta-glucosid 97.6 0.00015 5.1E-09 76.0 9.1 73 308-395 2-81 (417)
278 3l4b_C TRKA K+ channel protien 97.6 0.00032 1.1E-08 66.8 10.6 95 309-420 1-97 (218)
279 1x7d_A Ornithine cyclodeaminas 97.6 8.9E-05 3E-09 76.1 7.0 95 309-424 130-227 (350)
280 3ce6_A Adenosylhomocysteinase; 97.6 9.1E-05 3.1E-09 79.1 7.1 87 309-424 275-362 (494)
281 1b8p_A Protein (malate dehydro 97.5 0.00012 4.2E-09 74.5 7.7 101 309-423 6-133 (329)
282 3kb6_A D-lactate dehydrogenase 97.5 5.9E-05 2E-09 76.8 5.3 102 308-436 141-245 (334)
283 3uuw_A Putative oxidoreductase 97.5 0.00018 6.1E-09 72.5 8.6 98 306-431 4-106 (308)
284 3h9u_A Adenosylhomocysteinase; 97.5 4.6E-05 1.6E-09 79.4 4.2 87 309-424 212-299 (436)
285 2dc1_A L-aspartate dehydrogena 97.5 9.8E-05 3.3E-09 71.5 5.8 78 310-424 2-82 (236)
286 3qy9_A DHPR, dihydrodipicolina 97.5 0.00024 8.3E-09 68.8 8.5 88 307-430 2-90 (243)
287 3e9m_A Oxidoreductase, GFO/IDH 97.5 0.00031 1E-08 71.6 9.4 99 307-431 4-107 (330)
288 3euw_A MYO-inositol dehydrogen 97.5 0.00037 1.3E-08 71.3 10.0 96 308-430 4-104 (344)
289 1omo_A Alanine dehydrogenase; 97.4 0.00019 6.4E-09 72.9 7.3 70 309-398 126-198 (322)
290 3hhp_A Malate dehydrogenase; M 97.4 0.00029 9.9E-09 70.9 8.3 96 309-422 1-117 (312)
291 2f9i_B Acetyl-coenzyme A carbo 97.4 0.0038 1.3E-07 61.6 16.1 154 15-199 123-279 (285)
292 3gvp_A Adenosylhomocysteinase 97.4 0.00039 1.3E-08 72.2 9.3 88 309-425 221-309 (435)
293 3hdj_A Probable ornithine cycl 97.4 9.8E-05 3.3E-09 74.5 4.5 91 309-425 122-215 (313)
294 3ulk_A Ketol-acid reductoisome 97.4 0.00023 7.8E-09 73.4 7.1 186 309-517 38-249 (491)
295 3p2y_A Alanine dehydrogenase/p 97.4 0.00011 3.7E-09 75.6 4.5 105 309-424 185-303 (381)
296 3n58_A Adenosylhomocysteinase; 97.3 0.00028 9.5E-09 73.5 7.1 86 309-424 248-334 (464)
297 1id1_A Putative potassium chan 97.3 0.0011 3.7E-08 59.2 10.3 38 309-346 4-42 (153)
298 3u95_A Glycoside hydrolase, fa 97.3 0.00036 1.2E-08 74.5 8.0 75 309-395 1-84 (477)
299 2vhw_A Alanine dehydrogenase; 97.3 0.00011 3.8E-09 76.3 3.8 99 308-423 168-268 (377)
300 1tlt_A Putative oxidoreductase 97.3 0.00037 1.3E-08 70.5 7.6 71 307-400 4-78 (319)
301 3db2_A Putative NADPH-dependen 97.3 0.0006 2.1E-08 70.1 9.3 97 308-431 5-106 (354)
302 4hkt_A Inositol 2-dehydrogenas 97.3 0.00067 2.3E-08 69.0 9.2 96 308-431 3-103 (331)
303 3iav_A Propionyl-COA carboxyla 97.3 0.0056 1.9E-07 65.5 16.6 146 17-200 100-258 (530)
304 1xea_A Oxidoreductase, GFO/IDH 97.3 0.00091 3.1E-08 67.8 10.2 69 309-399 3-75 (323)
305 3ezy_A Dehydrogenase; structur 97.3 0.00055 1.9E-08 70.0 8.6 96 309-430 3-103 (344)
306 4h7p_A Malate dehydrogenase; s 97.3 0.00054 1.8E-08 69.8 8.3 103 307-423 23-150 (345)
307 1hye_A L-lactate/malate dehydr 97.2 0.0011 3.9E-08 66.8 10.5 99 309-421 1-120 (313)
308 2eez_A Alanine dehydrogenase; 97.2 0.00023 7.9E-09 73.7 5.4 98 309-423 167-266 (369)
309 3u62_A Shikimate dehydrogenase 97.2 6.8E-05 2.3E-09 73.3 1.3 37 310-346 110-147 (253)
310 2z2v_A Hypothetical protein PH 97.2 0.00045 1.6E-08 71.3 7.5 90 308-423 16-108 (365)
311 2ho3_A Oxidoreductase, GFO/IDH 97.2 0.00078 2.7E-08 68.3 9.2 95 309-430 2-101 (325)
312 4dio_A NAD(P) transhydrogenase 97.2 0.00011 3.8E-09 76.2 2.8 111 309-424 191-313 (405)
313 3n6r_B Propionyl-COA carboxyla 97.2 0.0072 2.4E-07 64.6 16.8 138 25-199 118-265 (531)
314 3c1a_A Putative oxidoreductase 97.2 0.00051 1.8E-08 69.4 7.6 94 307-430 9-108 (315)
315 3cea_A MYO-inositol 2-dehydrog 97.2 0.0013 4.3E-08 67.3 10.5 72 307-400 7-84 (346)
316 2egg_A AROE, shikimate 5-dehyd 97.2 0.00017 5.7E-09 72.4 3.8 39 309-347 142-181 (297)
317 1iuk_A Hypothetical protein TT 97.2 0.00061 2.1E-08 60.1 7.0 103 309-443 14-122 (140)
318 3rc1_A Sugar 3-ketoreductase; 97.2 0.00079 2.7E-08 69.1 8.5 73 305-400 24-102 (350)
319 2d59_A Hypothetical protein PH 97.1 0.0012 4.2E-08 58.4 8.4 101 309-443 23-129 (144)
320 3phh_A Shikimate dehydrogenase 97.1 0.00049 1.7E-08 67.6 5.7 65 309-398 119-183 (269)
321 2glx_A 1,5-anhydro-D-fructose 97.1 0.0018 6E-08 65.8 10.0 68 310-399 2-74 (332)
322 3e18_A Oxidoreductase; dehydro 97.1 0.0014 4.6E-08 67.6 9.0 70 307-400 4-78 (359)
323 3ec7_A Putative dehydrogenase; 97.0 0.0014 4.8E-08 67.4 8.8 100 305-430 20-126 (357)
324 3mz0_A Inositol 2-dehydrogenas 97.0 0.0016 5.6E-08 66.5 9.0 70 309-400 3-79 (344)
325 3bio_A Oxidoreductase, GFO/IDH 97.0 0.0016 5.4E-08 65.4 8.3 85 308-422 9-95 (304)
326 3u9r_B MCC beta, methylcrotony 97.0 0.02 6.9E-07 61.4 17.2 142 25-198 134-284 (555)
327 1npy_A Hypothetical shikimate 96.9 0.0016 5.6E-08 64.1 8.1 39 309-347 120-159 (271)
328 1on3_A Methylmalonyl-COA carbo 96.9 0.017 5.7E-07 62.0 16.3 141 25-201 108-256 (523)
329 3evn_A Oxidoreductase, GFO/IDH 96.9 0.00082 2.8E-08 68.3 5.9 99 306-431 3-107 (329)
330 1leh_A Leucine dehydrogenase; 96.9 0.0013 4.4E-08 67.6 7.3 39 309-347 174-212 (364)
331 3l9w_A Glutathione-regulated p 96.9 0.0035 1.2E-07 65.7 10.8 39 309-347 5-43 (413)
332 1p77_A Shikimate 5-dehydrogena 96.9 0.00097 3.3E-08 65.9 6.1 40 309-348 120-159 (272)
333 1gpj_A Glutamyl-tRNA reductase 96.9 0.00057 1.9E-08 71.6 4.5 70 309-399 168-239 (404)
334 3o8q_A Shikimate 5-dehydrogena 96.9 0.00093 3.2E-08 66.2 5.8 41 309-349 127-168 (281)
335 3ond_A Adenosylhomocysteinase; 96.9 0.0017 5.9E-08 68.7 8.0 87 309-424 266-353 (488)
336 1nyt_A Shikimate 5-dehydrogena 96.9 0.0018 6.1E-08 63.9 7.6 39 309-347 120-158 (271)
337 1x0u_A Hypothetical methylmalo 96.8 0.024 8.2E-07 60.8 16.6 141 25-201 104-254 (522)
338 5mdh_A Malate dehydrogenase; o 96.8 0.0006 2E-08 69.3 3.7 95 309-417 4-123 (333)
339 2bzr_A Propionyl-COA carboxyla 96.8 0.033 1.1E-06 59.9 17.3 137 25-199 121-268 (548)
340 3upl_A Oxidoreductase; rossman 96.8 0.0029 1E-07 66.3 8.7 152 309-487 24-190 (446)
341 1jw9_B Molybdopterin biosynthe 96.8 0.0015 5E-08 63.7 6.0 33 309-341 32-65 (249)
342 3m2t_A Probable dehydrogenase; 96.8 0.0016 5.5E-08 67.0 6.6 71 307-399 4-80 (359)
343 1ydw_A AX110P-like protein; st 96.7 0.0056 1.9E-07 62.9 10.0 99 308-430 6-110 (362)
344 3pwz_A Shikimate dehydrogenase 96.7 0.0023 8E-08 63.0 6.7 40 309-348 121-161 (272)
345 3don_A Shikimate dehydrogenase 96.7 0.00023 7.7E-09 70.5 -0.8 38 309-346 118-156 (277)
346 1h6d_A Precursor form of gluco 96.6 0.0069 2.4E-07 63.9 10.5 78 305-400 80-163 (433)
347 1x13_A NAD(P) transhydrogenase 96.6 0.00068 2.3E-08 70.8 2.7 39 309-347 173-211 (401)
348 3jyo_A Quinate/shikimate dehyd 96.6 0.0017 5.8E-08 64.4 5.4 43 309-351 128-171 (283)
349 3abi_A Putative uncharacterize 96.6 0.0021 7.3E-08 66.3 6.3 68 309-399 17-89 (365)
350 2p2s_A Putative oxidoreductase 96.6 0.0059 2E-07 62.1 9.6 71 308-400 4-79 (336)
351 7mdh_A Protein (malate dehydro 96.6 0.0051 1.7E-07 63.1 8.9 107 308-424 32-159 (375)
352 3ius_A Uncharacterized conserv 96.6 0.0048 1.6E-07 60.8 8.3 39 308-346 5-43 (286)
353 1pjc_A Protein (L-alanine dehy 96.6 0.0013 4.3E-08 67.9 4.1 99 309-424 168-268 (361)
354 3ohs_X Trans-1,2-dihydrobenzen 96.5 0.0061 2.1E-07 61.9 9.0 97 309-431 3-106 (334)
355 1l7d_A Nicotinamide nucleotide 96.5 0.0013 4.3E-08 68.5 3.7 39 309-347 173-211 (384)
356 4had_A Probable oxidoreductase 96.4 0.0038 1.3E-07 63.8 6.8 73 306-400 21-99 (350)
357 3gdo_A Uncharacterized oxidore 96.4 0.019 6.5E-07 58.8 12.1 70 307-401 4-79 (358)
358 3dfz_A SIRC, precorrin-2 dehyd 96.4 0.011 3.9E-07 56.1 9.4 129 309-478 32-163 (223)
359 4f3y_A DHPR, dihydrodipicolina 96.4 0.00065 2.2E-08 66.9 0.8 103 306-430 5-111 (272)
360 1f06_A MESO-diaminopimelate D- 96.4 0.0021 7.1E-08 65.1 4.5 92 308-431 3-98 (320)
361 1nvt_A Shikimate 5'-dehydrogen 96.4 0.0043 1.5E-07 61.7 6.5 74 309-396 129-202 (287)
362 3u3x_A Oxidoreductase; structu 96.4 0.022 7.5E-07 58.5 12.1 98 308-431 26-128 (361)
363 3fbt_A Chorismate mutase and s 96.4 0.0032 1.1E-07 62.2 5.4 38 309-346 123-161 (282)
364 2aef_A Calcium-gated potassium 96.3 0.0051 1.7E-07 59.0 6.5 96 308-424 9-107 (234)
365 1ff9_A Saccharopine reductase; 96.3 0.0026 8.8E-08 67.5 4.5 40 307-346 2-41 (450)
366 1x0u_A Hypothetical methylmalo 96.3 0.03 1E-06 60.0 12.7 162 19-202 330-507 (522)
367 4a26_A Putative C-1-tetrahydro 96.2 0.0047 1.6E-07 61.0 5.7 75 309-425 166-241 (300)
368 2ixa_A Alpha-N-acetylgalactosa 96.2 0.017 5.7E-07 61.2 10.4 78 306-400 18-104 (444)
369 3e8x_A Putative NAD-dependent 96.2 0.026 8.8E-07 53.8 10.9 40 307-346 20-60 (236)
370 4ina_A Saccharopine dehydrogen 96.2 0.01 3.5E-07 62.0 8.4 43 308-350 1-46 (405)
371 3e82_A Putative oxidoreductase 96.2 0.0049 1.7E-07 63.5 5.9 69 307-400 6-80 (364)
372 3eag_A UDP-N-acetylmuramate:L- 96.2 0.0092 3.2E-07 60.4 7.8 36 306-341 2-38 (326)
373 3ngx_A Bifunctional protein fo 96.2 0.0035 1.2E-07 61.2 4.3 73 309-425 151-224 (276)
374 3r6d_A NAD-dependent epimerase 96.1 0.014 4.9E-07 55.0 8.6 39 308-346 5-46 (221)
375 3tum_A Shikimate dehydrogenase 96.1 0.012 4E-07 57.8 7.9 70 309-396 126-196 (269)
376 1vrg_A Propionyl-COA carboxyla 96.1 0.083 2.8E-06 56.6 15.1 139 25-199 111-258 (527)
377 3v5n_A Oxidoreductase; structu 96.1 0.047 1.6E-06 57.1 13.1 74 307-400 36-123 (417)
378 4g65_A TRK system potassium up 96.1 0.0095 3.2E-07 63.3 7.7 40 309-348 4-43 (461)
379 1a4i_A Methylenetetrahydrofola 96.1 0.0063 2.1E-07 60.1 5.7 73 309-425 166-239 (301)
380 2yyy_A Glyceraldehyde-3-phosph 96.1 0.022 7.6E-07 57.9 10.0 109 308-425 2-115 (343)
381 1dih_A Dihydrodipicolinate red 96.0 0.0094 3.2E-07 58.7 6.8 102 308-430 5-110 (273)
382 3tnl_A Shikimate dehydrogenase 96.0 0.0091 3.1E-07 60.0 6.4 41 309-349 155-199 (315)
383 2b0j_A 5,10-methenyltetrahydro 95.9 0.054 1.9E-06 52.2 11.2 109 375-486 128-241 (358)
384 3p2o_A Bifunctional protein fo 95.9 0.0079 2.7E-07 59.0 5.6 73 309-425 161-234 (285)
385 1edz_A 5,10-methylenetetrahydr 95.9 0.0066 2.3E-07 60.8 4.9 91 309-426 178-278 (320)
386 3moi_A Probable dehydrogenase; 95.9 0.014 4.7E-07 60.6 7.6 69 309-400 3-77 (387)
387 2axq_A Saccharopine dehydrogen 95.9 0.0051 1.7E-07 65.5 4.3 41 307-347 22-63 (467)
388 1vrg_A Propionyl-COA carboxyla 95.9 0.18 6.2E-06 54.0 16.4 162 21-202 337-512 (527)
389 1zh8_A Oxidoreductase; TM0312, 95.8 0.023 7.8E-07 57.8 8.9 71 308-400 18-95 (340)
390 3kux_A Putative oxidoreductase 95.8 0.011 3.8E-07 60.4 6.6 69 308-401 7-81 (352)
391 3l07_A Bifunctional protein fo 95.8 0.0094 3.2E-07 58.4 5.7 72 309-424 162-234 (285)
392 3h2s_A Putative NADH-flavin re 95.8 0.01 3.5E-07 56.0 5.9 38 309-346 1-39 (224)
393 1b0a_A Protein (fold bifunctio 95.8 0.0053 1.8E-07 60.3 3.8 73 309-425 160-233 (288)
394 1zud_1 Adenylyltransferase THI 95.7 0.021 7.3E-07 55.4 7.9 33 309-341 29-62 (251)
395 3fhl_A Putative oxidoreductase 95.7 0.01 3.4E-07 61.1 5.9 70 306-400 3-78 (362)
396 3f4l_A Putative oxidoreductase 95.7 0.014 4.6E-07 59.6 6.8 69 309-400 3-78 (345)
397 3qvo_A NMRA family protein; st 95.7 0.0033 1.1E-07 60.3 2.0 41 305-345 20-62 (236)
398 3t4e_A Quinate/shikimate dehyd 95.7 0.0075 2.6E-07 60.5 4.6 39 309-347 149-191 (312)
399 2vt3_A REX, redox-sensing tran 95.7 0.0052 1.8E-07 58.1 3.2 78 309-411 86-167 (215)
400 3dty_A Oxidoreductase, GFO/IDH 95.7 0.015 5E-07 60.6 7.0 75 306-400 10-98 (398)
401 3ew7_A LMO0794 protein; Q8Y8U8 95.7 0.014 4.6E-07 54.9 6.1 38 309-346 1-39 (221)
402 1y7t_A Malate dehydrogenase; N 95.7 0.037 1.3E-06 55.9 9.7 33 309-341 5-45 (327)
403 2nvw_A Galactose/lactose metab 95.6 0.037 1.3E-06 59.1 10.1 74 306-399 37-120 (479)
404 2c2x_A Methylenetetrahydrofola 95.6 0.0089 3E-07 58.5 4.6 72 309-424 159-233 (281)
405 4a5o_A Bifunctional protein fo 95.5 0.011 3.9E-07 57.8 5.0 73 309-425 162-235 (286)
406 3btv_A Galactose/lactose metab 95.5 0.047 1.6E-06 57.6 10.1 72 308-399 20-101 (438)
407 3fpf_A Mtnas, putative unchara 95.5 0.073 2.5E-06 52.7 10.7 94 309-422 124-221 (298)
408 4gqa_A NAD binding oxidoreduct 95.5 0.012 4.2E-07 61.5 5.4 70 309-400 27-109 (412)
409 3dhn_A NAD-dependent epimerase 95.5 0.0056 1.9E-07 58.1 2.5 37 308-344 4-41 (227)
410 4hv4_A UDP-N-acetylmuramate--L 95.4 0.044 1.5E-06 58.7 9.8 72 306-398 20-94 (494)
411 3gf3_A Glutaconyl-COA decarbox 95.4 0.3 1E-05 52.8 16.0 163 25-200 119-289 (588)
412 4gmf_A Yersiniabactin biosynth 95.3 0.024 8.1E-07 58.4 6.7 67 309-399 8-78 (372)
413 1on3_A Methylmalonyl-COA carbo 95.2 0.31 1.1E-05 52.2 15.2 162 21-202 333-508 (523)
414 3e5r_O PP38, glyceraldehyde-3- 95.1 0.022 7.6E-07 57.7 5.9 38 309-346 4-45 (337)
415 3dr3_A N-acetyl-gamma-glutamyl 95.1 0.026 8.9E-07 57.2 6.4 101 307-428 3-111 (337)
416 1y1p_A ARII, aldehyde reductas 95.1 0.11 3.7E-06 52.2 11.0 40 308-347 11-51 (342)
417 3ff4_A Uncharacterized protein 95.1 0.023 7.8E-07 48.6 4.9 81 308-420 4-88 (122)
418 1pix_A Glutaconyl-COA decarbox 95.0 0.17 5.7E-06 54.9 12.7 157 26-204 385-563 (587)
419 4b4o_A Epimerase family protei 95.0 0.024 8.3E-07 56.1 5.8 34 309-342 1-35 (298)
420 1cf2_P Protein (glyceraldehyde 95.0 0.024 8.3E-07 57.5 5.8 38 309-346 2-41 (337)
421 1lu9_A Methylene tetrahydromet 95.0 0.037 1.3E-06 54.8 6.9 41 309-349 120-161 (287)
422 3iav_A Propionyl-COA carboxyla 94.9 0.24 8.1E-06 53.0 13.3 163 18-201 336-514 (530)
423 1nvm_B Acetaldehyde dehydrogen 94.9 0.041 1.4E-06 55.2 7.0 36 308-343 4-42 (312)
424 2czc_A Glyceraldehyde-3-phosph 94.9 0.039 1.3E-06 56.0 7.0 86 309-400 3-92 (334)
425 2ejw_A HDH, homoserine dehydro 94.8 0.018 6.1E-07 58.3 4.0 179 309-547 4-197 (332)
426 3ijp_A DHPR, dihydrodipicolina 94.7 0.038 1.3E-06 54.5 6.2 101 308-429 21-125 (288)
427 3do5_A HOM, homoserine dehydro 94.7 0.015 5E-07 58.8 3.3 197 308-547 2-218 (327)
428 1u8f_O GAPDH, glyceraldehyde-3 94.7 0.039 1.3E-06 55.9 6.4 39 308-346 3-45 (335)
429 4fb5_A Probable oxidoreductase 94.7 0.03 1E-06 57.8 5.6 70 310-401 27-108 (393)
430 2bzr_A Propionyl-COA carboxyla 94.7 0.44 1.5E-05 51.2 14.7 160 21-200 354-531 (548)
431 4h3v_A Oxidoreductase domain p 94.6 0.023 8E-07 58.5 4.7 70 310-401 8-89 (390)
432 3dqp_A Oxidoreductase YLBE; al 94.6 0.091 3.1E-06 49.2 8.5 35 310-344 2-37 (219)
433 3c1o_A Eugenol synthase; pheny 94.6 0.039 1.3E-06 55.2 6.2 34 308-341 4-38 (321)
434 3lk7_A UDP-N-acetylmuramoylala 94.6 0.12 4E-06 54.7 10.0 35 308-342 9-43 (451)
435 2gas_A Isoflavone reductase; N 94.5 0.034 1.2E-06 55.2 5.4 34 308-341 2-36 (307)
436 2r6j_A Eugenol synthase 1; phe 94.5 0.026 9E-07 56.4 4.5 35 308-342 11-46 (318)
437 3kkj_A Amine oxidase, flavin-c 94.4 0.019 6.5E-07 54.7 3.2 32 310-341 4-35 (336)
438 3o9z_A Lipopolysaccaride biosy 94.4 0.036 1.2E-06 55.6 5.2 36 308-343 3-40 (312)
439 3i6i_A Putative leucoanthocyan 94.4 0.055 1.9E-06 54.8 6.6 36 306-341 8-44 (346)
440 3oqb_A Oxidoreductase; structu 94.3 0.024 8.2E-07 58.6 3.9 72 307-400 5-96 (383)
441 3n6r_B Propionyl-COA carboxyla 94.3 0.34 1.2E-05 51.7 12.7 161 18-198 342-512 (531)
442 3h8v_A Ubiquitin-like modifier 94.3 0.1 3.6E-06 51.5 8.2 33 309-341 37-70 (292)
443 1b7g_O Protein (glyceraldehyde 94.3 0.062 2.1E-06 54.5 6.7 102 309-425 2-110 (340)
444 1c1d_A L-phenylalanine dehydro 94.3 0.065 2.2E-06 54.5 6.9 35 309-343 176-210 (355)
445 2nu8_A Succinyl-COA ligase [AD 94.3 0.028 9.5E-07 55.8 4.0 91 309-429 8-102 (288)
446 3k8x_A Acetyl-COA carboxylase; 94.3 0.13 4.3E-06 56.8 9.4 81 97-202 245-333 (758)
447 1qyc_A Phenylcoumaran benzylic 94.2 0.039 1.3E-06 54.7 5.1 34 308-341 4-38 (308)
448 4hb9_A Similarities with proba 94.2 0.021 7.2E-07 59.0 3.1 34 309-342 2-35 (412)
449 1lnq_A MTHK channels, potassiu 94.2 0.038 1.3E-06 56.0 4.9 36 309-345 116-151 (336)
450 3h5n_A MCCB protein; ubiquitin 94.2 0.07 2.4E-06 54.5 6.9 33 309-341 119-152 (353)
451 1vl6_A Malate oxidoreductase; 94.1 0.0098 3.4E-07 60.9 0.4 32 309-340 193-225 (388)
452 3oa2_A WBPB; oxidoreductase, s 94.1 0.042 1.4E-06 55.3 5.1 36 308-343 3-40 (318)
453 3cps_A Glyceraldehyde 3-phosph 94.1 0.085 2.9E-06 53.6 7.2 151 307-481 16-186 (354)
454 1ys4_A Aspartate-semialdehyde 94.1 0.041 1.4E-06 56.2 4.9 105 308-426 8-117 (354)
455 3oh8_A Nucleoside-diphosphate 94.0 0.067 2.3E-06 57.6 6.8 36 308-343 147-183 (516)
456 2ozp_A N-acetyl-gamma-glutamyl 94.0 0.055 1.9E-06 55.1 5.6 98 308-427 4-103 (345)
457 1p9l_A Dihydrodipicolinate red 94.0 0.13 4.4E-06 49.6 7.9 31 310-340 2-35 (245)
458 3sju_A Keto reductase; short-c 94.0 0.39 1.3E-05 46.9 11.8 41 309-349 25-66 (279)
459 3ruf_A WBGU; rossmann fold, UD 93.9 0.052 1.8E-06 54.9 5.4 35 308-342 25-60 (351)
460 4ew6_A D-galactose-1-dehydroge 93.9 0.034 1.2E-06 56.2 3.8 63 305-397 22-91 (330)
461 3fbg_A Putative arginate lyase 93.8 0.25 8.5E-06 50.1 10.3 40 309-348 152-192 (346)
462 3m2p_A UDP-N-acetylglucosamine 93.8 0.22 7.5E-06 49.4 9.7 36 308-343 2-38 (311)
463 1qyd_A Pinoresinol-lariciresin 93.8 0.061 2.1E-06 53.4 5.6 34 308-341 4-38 (313)
464 1j5p_A Aspartate dehydrogenase 93.8 0.087 3E-06 50.8 6.3 78 308-423 12-91 (253)
465 4fn4_A Short chain dehydrogena 93.7 0.33 1.1E-05 46.9 10.5 42 310-351 8-51 (254)
466 3gpi_A NAD-dependent epimerase 93.7 0.033 1.1E-06 54.8 3.3 37 307-343 2-38 (286)
467 1xyg_A Putative N-acetyl-gamma 93.6 0.091 3.1E-06 53.7 6.5 99 308-427 16-116 (359)
468 3o38_A Short chain dehydrogena 93.6 0.54 1.8E-05 45.4 11.9 42 308-349 22-65 (266)
469 3i23_A Oxidoreductase, GFO/IDH 93.6 0.11 3.6E-06 53.0 7.0 70 309-400 3-78 (349)
470 3mtj_A Homoserine dehydrogenas 93.5 0.1 3.5E-06 54.7 6.9 64 309-397 11-88 (444)
471 2dt5_A AT-rich DNA-binding pro 93.5 0.022 7.5E-07 53.7 1.5 78 309-411 81-162 (211)
472 4g81_D Putative hexonate dehyd 93.5 0.28 9.6E-06 47.5 9.4 42 309-350 9-52 (255)
473 1oi7_A Succinyl-COA synthetase 93.4 0.031 1.1E-06 55.4 2.5 92 308-429 7-102 (288)
474 3gf3_A Glutaconyl-COA decarbox 93.4 0.53 1.8E-05 50.9 12.2 155 26-204 387-565 (588)
475 3ing_A Homoserine dehydrogenas 93.4 0.068 2.3E-06 53.8 5.0 37 510-547 183-219 (325)
476 1c0p_A D-amino acid oxidase; a 93.3 0.055 1.9E-06 55.1 4.3 32 309-340 7-38 (363)
477 3qiv_A Short-chain dehydrogena 93.3 0.52 1.8E-05 45.0 11.1 42 308-349 9-51 (253)
478 3i1j_A Oxidoreductase, short c 93.2 0.48 1.6E-05 45.1 10.7 41 309-349 15-56 (247)
479 3ucx_A Short chain dehydrogena 93.1 0.72 2.5E-05 44.5 11.9 41 309-349 12-53 (264)
480 1y8q_B Anthracycline-, ubiquit 93.1 0.05 1.7E-06 59.6 3.7 33 309-341 18-51 (640)
481 2ep5_A 350AA long hypothetical 93.1 0.16 5.6E-06 51.7 7.4 104 308-426 4-111 (350)
482 3ip3_A Oxidoreductase, putativ 93.1 0.05 1.7E-06 55.1 3.5 73 308-399 2-79 (337)
483 3qj4_A Renalase; FAD/NAD(P)-bi 93.0 0.041 1.4E-06 55.6 2.8 34 308-341 1-37 (342)
484 1ebf_A Homoserine dehydrogenas 93.0 0.16 5.5E-06 51.8 7.2 33 308-340 4-41 (358)
485 3oz2_A Digeranylgeranylglycero 92.9 0.046 1.6E-06 55.9 3.1 33 310-342 6-38 (397)
486 4dgk_A Phytoene dehydrogenase; 92.8 0.043 1.5E-06 58.7 2.7 35 308-342 1-35 (501)
487 4g65_A TRK system potassium up 92.8 0.35 1.2E-05 51.2 9.7 98 307-420 234-331 (461)
488 2ywl_A Thioredoxin reductase r 92.7 0.067 2.3E-06 48.5 3.5 33 309-341 2-34 (180)
489 4fs3_A Enoyl-[acyl-carrier-pro 92.7 0.73 2.5E-05 44.4 11.3 40 309-348 7-49 (256)
490 3tfo_A Putative 3-oxoacyl-(acy 92.7 0.66 2.3E-05 45.0 11.0 42 309-350 5-47 (264)
491 3lf2_A Short chain oxidoreduct 92.7 0.65 2.2E-05 44.9 10.9 42 309-350 9-51 (265)
492 2jl1_A Triphenylmethane reduct 92.7 0.08 2.7E-06 51.8 4.3 37 309-345 1-40 (287)
493 4gx0_A TRKA domain protein; me 92.7 0.18 6E-06 55.0 7.4 82 301-420 342-440 (565)
494 3e05_A Precorrin-6Y C5,15-meth 92.6 0.38 1.3E-05 44.3 8.8 93 309-422 42-141 (204)
495 1yvv_A Amine oxidase, flavin-c 92.6 0.057 2E-06 54.1 3.2 33 309-341 3-35 (336)
496 1iy8_A Levodione reductase; ox 92.6 0.66 2.3E-05 44.8 10.8 41 309-349 14-55 (267)
497 3rp8_A Flavoprotein monooxygen 92.6 0.066 2.3E-06 55.5 3.7 35 308-342 23-57 (407)
498 3ip1_A Alcohol dehydrogenase, 92.5 0.55 1.9E-05 48.7 10.7 39 309-347 215-254 (404)
499 2wm3_A NMRA-like family domain 92.5 0.17 5.7E-06 49.9 6.4 37 308-344 5-43 (299)
500 3ioy_A Short-chain dehydrogena 92.5 0.76 2.6E-05 45.9 11.4 43 309-351 9-52 (319)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=4.1e-112 Score=950.39 Aligned_cols=564 Identities=35% Similarity=0.538 Sum_probs=505.9
Q ss_pred EEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHH
Q 007805 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87 (589)
Q Consensus 8 ~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 87 (589)
+++ +|+|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||+|+.||+|+|++++...... ....
T Consensus 25 ~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~-------~~~~ 96 (742)
T 3zwc_A 25 LRL-PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-------LALG 96 (742)
T ss_dssp EEC-STTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC-------SHHH
T ss_pred EEe-eCCEEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh-------HHHH
Confidence 445 78999999999999999999999999999999999999999999999999999999988653221 1234
Q ss_pred HHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCC
Q 007805 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167 (589)
Q Consensus 88 ~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~ 167 (589)
.++ ++|.++||||||+|||+|+|||++|+|+||||||+++++|++||+++|++|++|++++|||++|..+|++|++||+
T Consensus 97 ~~~-~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~ 175 (742)
T 3zwc_A 97 SLV-DEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGK 175 (742)
T ss_dssp HHH-HHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHH-HHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCC
Confidence 566 7799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhHHHH
Q 007805 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247 (589)
Q Consensus 168 ~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 247 (589)
+++|+||+++||||+|+|++. .++|.++|++++++++...+..++... ............+...+++.+++|||.++
T Consensus 176 ~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~k~~~~~~A~~~~ 252 (742)
T 3zwc_A 176 YLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPIEPRRIFNKPVP--SLPNMDSVFAEAIAKVRKQYPGVLAPETC 252 (742)
T ss_dssp CEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCSGGGCGGGSCCC--CCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred chhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCchhhhhhccccc--ccchhhhhHHHHHHHHhhhccchhHHHHH
Confidence 999999999999999998875 578999999999998876554433322 11122233444555667888899999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCCCCC---CCCCCCCccceEEEEcCCCCcHHHH
Q 007805 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT---DIGLKPRGVRKVAVIGGGLMGSGIA 324 (589)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~~~~---~~~~~~~~~~kI~IIG~G~mG~~iA 324 (589)
+++++.+...+++++++.|.+.|.+++.|+++++++++|+++|++++.++.. ..+.+++.|+||+|||+|+||++||
T Consensus 253 ~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA 332 (742)
T 3zwc_A 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332 (742)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765421 2345678899999999999999999
Q ss_pred HHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCCCEEEEeccCChHHHHH
Q 007805 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404 (589)
Q Consensus 325 ~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIeavpe~~~~k~~ 404 (589)
..++++|++|+++|++++.++++.+.+...+.+.+.++..+.. .....+++.+++++.+++||+|||||||++++|++
T Consensus 333 ~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 333 ISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHH
T ss_pred HHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHH
Confidence 9999999999999999999999999999988887776554322 22346778888999999999999999999999999
Q ss_pred HHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 007805 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484 (589)
Q Consensus 405 v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v 484 (589)
+|++|++++++++|++||||+++++++++.+.+|+||+|+|||||++.+++|||++++.|++++++.+.++.+.+||+||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCcccccccHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCCcHHHHHHHhchHHHHHHHHHHHHhCCCC-------
Q 007805 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR------- 557 (589)
Q Consensus 485 ~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv~~~~iD~~~~~~g~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~------- 557 (589)
+++|.||||+||++.++++||++++++|+++++||.++.++|||||||+++|++|||+.+++.+.++..+++.
T Consensus 491 ~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~~~ 570 (742)
T 3zwc_A 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVR 570 (742)
T ss_dssp ECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCCTT
T ss_pred ccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhCHHHHHHHHHHHHhhCcccCccchhh
Confidence 9999999999999999999999999999999999999988999999999999999999999999987654431
Q ss_pred ----CCchHHHHHHHHcCCCCc---ccceeeCCCc
Q 007805 558 ----SFQSPLVDLLLKSGRNGN---KGFSFLFVFS 585 (589)
Q Consensus 558 ----~~~~~~l~~~v~~g~~G~---~Gfy~y~~~~ 585 (589)
+.+++++++|+++|++|+ +|||+|+.++
T Consensus 571 ~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~ 605 (742)
T 3zwc_A 571 KRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPL 605 (742)
T ss_dssp EETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTT
T ss_pred hcccccccHHHHHHHHCCCccccCCCeeEECCCCC
Confidence 125679999999999999 9999998653
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=4.2e-105 Score=899.92 Aligned_cols=575 Identities=59% Similarity=0.938 Sum_probs=493.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCCC--
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~-- 77 (589)
|+++.+.++..+++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++.......
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 82 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVK 82 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred CcCCeEEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhh
Confidence 55667889833789999999999889999999999999999999999999999999 76 999999999885422110
Q ss_pred cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
....+....+.++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|||++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 83 EPKAGYISIDIIT-DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp CCSSSHHHHHCCC-CCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHH-HHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0112222233444 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcC-hh--hhhhhhccCCCCChHHHHHHHHHHHHHH
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR-KP--WIRSLHRTDKLGSLSEAREVLKLARLQA 234 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (589)
+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.+ |. +.+. . .+.+........+..++.+.
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~-~--~~~~~~~~~~~~~~~a~~~~ 238 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSK-T--DKLPPLGEAREILTFAKAQT 238 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGGC-C--TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhhh-c--cccCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999872 22 2210 0 01112222333555566655
Q ss_pred H-HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCCCCCCCCCCCCccceEEE
Q 007805 235 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313 (589)
Q Consensus 235 ~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~~~~~~~~~~~~~~kI~I 313 (589)
+ ++++ ||||..+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+++|.++..+.+.+++.|+||+|
T Consensus 239 ~~~~~g-~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~V 317 (725)
T 2wtb_A 239 LKRAPN-MKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAI 317 (725)
T ss_dssp HHHCTT-CCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEE
T ss_pred HHhccC-CcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEE
Confidence 4 4555 9999999999999999999999999999999999999999999999999999998762211335567899999
Q ss_pred EcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCCCEEEE
Q 007805 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 393 (589)
Q Consensus 314 IG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIe 393 (589)
||+|+||++||..++++|++|++||++++.++++.+.+++.+++++++|.+++.+.+..+++++.+++++++++||+|||
T Consensus 318 IGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIe 397 (725)
T 2wtb_A 318 IGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397 (725)
T ss_dssp ECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEE
T ss_pred EcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEE
Confidence 99999999999999999999999999999999998889999999999999888777778889999999988999999999
Q ss_pred eccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCHHHHHHHH
Q 007805 394 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473 (589)
Q Consensus 394 avpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~ 473 (589)
||||+.++|+++++++.+++++++||+||||++++++++..+.++++++|+|||+|++.++++|+++++.|++++++.+.
T Consensus 398 aVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~ 477 (725)
T 2wtb_A 398 AVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLL 477 (725)
T ss_dssp CCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHH
T ss_pred cCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCCcHHHHHHHhchHHHHHHHHHHHHh
Q 007805 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 553 (589)
Q Consensus 474 ~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv~~~~iD~~~~~~g~p~Gpf~~~D~~Gld~~~~~~~~l~~~ 553 (589)
++++.+|++|++++|.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++.
T Consensus 478 ~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vGld~~~~i~~~~~~~ 557 (725)
T 2wtb_A 478 DVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIEN 557 (725)
T ss_dssp HHHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCC-CCchHHHHHHHHcCCCCc---ccceeeC
Q 007805 554 FPDR-SFQSPLVDLLLKSGRNGN---KGFSFLF 582 (589)
Q Consensus 554 ~~~~-~~~~~~l~~~v~~g~~G~---~Gfy~y~ 582 (589)
++++ +.| +++++|+++|++|+ +|||+|+
T Consensus 558 ~~~~~~~~-~~l~~~v~~g~lG~k~g~GfY~y~ 589 (725)
T 2wtb_A 558 FSERTYKS-MIIPLMQEDKRAGEATRKGFYLYD 589 (725)
T ss_dssp SGGGCCCC-THHHHHHTTC--------------
T ss_pred cCCccCCh-HHHHHHHHCCCceecCCceeEeCC
Confidence 9886 556 99999999999999 9999995
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=4.2e-105 Score=899.66 Aligned_cols=572 Identities=30% Similarity=0.508 Sum_probs=512.8
Q ss_pred CcEEEEEecCcEEEEEeCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCCC--c
Q 007805 4 PRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG--D 78 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p--~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~--~ 78 (589)
+++.++..+++|++|||||| +.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++....... .
T Consensus 6 ~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~ 84 (715)
T 1wdk_A 6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAE 84 (715)
T ss_dssp SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHH
T ss_pred CeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHH
Confidence 56888833789999999999 479999999999999999999999999999999 76 999999999986532111 1
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
...+....+.++ +++.++||||||+|||+|+|||++|+|+||+|||+++++|++||+++|++|++|++++|||++|..+
T Consensus 85 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~ 163 (715)
T 1wdk_A 85 LIAGNLEANKIF-SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDN 163 (715)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHH
Confidence 111223344566 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhc--ChhhhhhhhccC--CCCChHHHHH-HHHHHHH-
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTD--KLGSLSEARE-VLKLARL- 232 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~--~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~- 232 (589)
|++|++||++++|+||+++||||+|||++++++++.++|+++++. |....+ +.. +...-..... .+..++.
T Consensus 164 A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~k~~ 240 (715)
T 1wdk_A 164 AVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR---QPKLEKLKLNAIEQMMAFETAKGF 240 (715)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH---GGGGSCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc---ccccCccccCchhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987 421111 000 1000011111 2444444
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCCCCCCCCCCCCccceEE
Q 007805 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312 (589)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~~~~~~~~~~~~~~kI~ 312 (589)
..|+++++||||..+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+++|.++.+. + +++.++||+
T Consensus 241 ~~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~ 318 (715)
T 1wdk_A 241 VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAA 318 (715)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEE
T ss_pred HHHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEE
Confidence 35689999999999999999999999999999999999999999999999999999999998764322 2 456789999
Q ss_pred EEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCCCEEE
Q 007805 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 392 (589)
Q Consensus 313 IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVI 392 (589)
|||+|+||++||..++++|++|++||+++++++.+...+++.+++++++|.+++.+.+..+++++.+++++++++||+||
T Consensus 319 VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVI 398 (715)
T 1wdk_A 319 VLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVV 398 (715)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEE
T ss_pred EECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEE
Confidence 99999999999999999999999999999999999899999999999999999888888888999999998899999999
Q ss_pred EeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCHHHHHHH
Q 007805 393 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472 (589)
Q Consensus 393 eavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~ 472 (589)
|||||+.++|+++++++.+++++++||+||||+++++++++.+.++++|+|+|||+|++.++++|+++++.|++++++.+
T Consensus 399 eaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~ 478 (715)
T 1wdk_A 399 EAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATT 478 (715)
T ss_dssp ECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred HHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCCcHHHHHHHhchHHHHHHHHHHHH
Q 007805 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 552 (589)
Q Consensus 473 ~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv~~~~iD~~~~~~g~p~Gpf~~~D~~Gld~~~~~~~~l~~ 552 (589)
.++++.+|++|++++|.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++++.+++
T Consensus 479 ~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vGld~~~~i~~~~~~ 558 (715)
T 1wdk_A 479 VAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAE 558 (715)
T ss_dssp HHHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred hCCCCCCch--HHHHHHHHcCCCCc---ccceeeC
Q 007805 553 AFPDRSFQS--PLVDLLLKSGRNGN---KGFSFLF 582 (589)
Q Consensus 553 ~~~~~~~~~--~~l~~~v~~g~~G~---~Gfy~y~ 582 (589)
.+++++.|+ +++++||++|++|+ +|||+|+
T Consensus 559 ~~~~~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 559 GFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp HCHHHHCCSSCCHHHHHHHTTCCBTTTTBSSSEEC
T ss_pred hcCCccCCChHHHHHHHHhCchhhhcCCcEEEecc
Confidence 988776677 89999999999999 9999996
No 4
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=2.2e-56 Score=473.52 Aligned_cols=273 Identities=32% Similarity=0.516 Sum_probs=258.0
Q ss_pred CCCccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 007805 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (589)
Q Consensus 304 ~~~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (589)
++++|+||+|||+|+||++||..++++|++|++||++++ ++.+.+++.+++++++|.++.++.+..+++++++++++
T Consensus 50 ~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~ 126 (460)
T 3k6j_A 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH 126 (460)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH
Confidence 457889999999999999999999999999999999998 45667888899999999999988888999999999998
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCC
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~ 463 (589)
++++||+|||||||++++|+++|++|.+++++++||+||||+++++++++.+++|++|+|+|||+|++.++++||+++..
T Consensus 127 al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~ 206 (460)
T 3k6j_A 127 KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSH 206 (460)
T ss_dssp GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSS
T ss_pred HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHH-HcCCCHHHHHHHHHhcCCCCcHHHHHHHhchHH
Q 007805 464 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 542 (589)
Q Consensus 464 t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~-~~Gv~~~~iD~~~~~~g~p~Gpf~~~D~~Gld~ 542 (589)
|++++++.+.++++.+||+|++++|.|||++||++.++++||+.++ ++|+++++||++++++|+|||||+++|++|||+
T Consensus 207 Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~~~G~pmGPf~l~D~vGlD~ 286 (460)
T 3k6j_A 207 TSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFDV 286 (460)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTBSSCHHHHHHHHCTHH
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCcCHHHHHHHhchHH
Confidence 9999999999999999999999999999999999999999999999 779999999999988999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHcCCCCc---ccceeeCCCc
Q 007805 543 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGN---KGFSFLFVFS 585 (589)
Q Consensus 543 ~~~~~~~l~~~~~~~~~~~~~l~~~v~~g~~G~---~Gfy~y~~~~ 585 (589)
.+++.+.+ . ..+++++++||++|++|+ +|||+|+.++
T Consensus 287 ~~~i~~~~----~--~~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~ 326 (460)
T 3k6j_A 287 MEKLKKEN----G--LEPNPIEKEMWRLKRYGRKTNKGFYKYDDKT 326 (460)
T ss_dssp HHHHHHHS----C--CCCCHHHHHHHHTTCCBGGGTBSSSEECTTT
T ss_pred HHHHHHHh----c--cCchHHHHHHHHCCCCeeecCCEEEECCCCC
Confidence 99998876 1 235689999999999999 9999998764
No 5
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=6.9e-56 Score=440.76 Aligned_cols=250 Identities=28% Similarity=0.373 Sum_probs=229.6
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccch
Q 007805 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (589)
Q Consensus 6 ~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (589)
|.+|+ +|+|++||||||+ +|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...... ......
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~~~~~~ 78 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPD--YEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCC--HHHHTH
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchh--hHHHHH
Confidence 67888 8899999999995 7999999999999999999999999999999999999999999987653221 222333
Q ss_pred hHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHH
Q 007805 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (589)
Q Consensus 85 ~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l 164 (589)
..+.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|||++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 157 (254)
T 3hrx_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhh
Confidence 445566 7799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhH
Q 007805 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (589)
||++++|+||+++||||+|||++++++++.+++++|++.||.+++
T Consensus 158 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3hrx_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999986543
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 203 -~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 252 (254)
T 3hrx_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCC
Confidence 45788999999999999999999999999999999999999999998863
No 6
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=8.2e-56 Score=443.73 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=225.2
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc---c
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---V 79 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---~ 79 (589)
+.|.+++ ++||++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++........ .
T Consensus 15 e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 93 (274)
T 4fzw_C 15 EFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLG 93 (274)
T ss_dssp -CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHH
T ss_pred ccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHH
Confidence 6799999 8999999999996 699999999999999999999999999999999999999999998764322211 1
Q ss_pred cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
..+.+..+.++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 94 ~~~~~~~~~l~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 94 MSVERFYNPLV-RRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHTHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHH-HHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 11222344555 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
++|++||++++|+||+++||||+|||++++++++.++|+++++.||.+++
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 222 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLG------------------------------ 222 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999986543
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 223 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f~ 272 (274)
T 4fzw_C 223 ------LIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFT 272 (274)
T ss_dssp ------HHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCCC
T ss_pred ------HHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 55788999999999999999999999999999999999999999998863
No 7
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=1.5e-55 Score=438.29 Aligned_cols=250 Identities=30% Similarity=0.454 Sum_probs=229.3
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 007805 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (589)
Q Consensus 5 ~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (589)
.+.+++ +++|++||||||+ +|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++...... ..+.
T Consensus 6 ~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~---~~~~ 81 (258)
T 4fzw_A 6 ELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLA---ATLN 81 (258)
T ss_dssp EEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHH---HHHT
T ss_pred cEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhh---hHHH
Confidence 588999 8999999999996 6999999999999999999999999999999999999999999988643211 1112
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHH
Q 007805 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (589)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ 163 (589)
.....++ .++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++|+
T Consensus 82 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ll 160 (258)
T 4fzw_A 82 DTRPQLW-ARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMV 160 (258)
T ss_dssp CSHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred hHHHHHH-HHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHH
Confidence 2234556 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 007805 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (589)
Q Consensus 164 ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (589)
+||++++|+||+++||||+|||++++++++.+++++|++.||.+++
T Consensus 161 ltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------------- 206 (258)
T 4fzw_A 161 LSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQ---------------------------------- 206 (258)
T ss_dssp HHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999986554
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 207 --~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 256 (258)
T 4fzw_A 207 --AAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFK 256 (258)
T ss_dssp --HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 55788999999999999999999999999999999999999999998853
No 8
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=4.1e-54 Score=463.22 Aligned_cols=279 Identities=35% Similarity=0.511 Sum_probs=265.6
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
+.++||+|||+|+||++||..++++|++|++||+++++++++.+++.+.+.+++++|.++..+.+..+++++.+++++++
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 35789999999999999999999999999999999999999999999999999999999999888899999999999889
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~ 465 (589)
++||+||+||||+.++|+++++++.+++++++||+||||+++++.++..+.++++++|+|||+|++.++++|++++..|+
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts 162 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATA 162 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCC
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCCcHHHHHHHhchHHH
Q 007805 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVA 543 (589)
Q Consensus 466 ~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p~Gpf~~~D~~Gld~~ 543 (589)
+++++.+.++++.+|+++++++|.|||++||++.++++||+.++++|. ++++||+++ .++|||||||+++|++|||+.
T Consensus 163 ~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~ 242 (483)
T 3mog_A 163 AEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVN 242 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHH
Confidence 999999999999999999999999999999999999999999999987 899999999 689999999999999999999
Q ss_pred HHHHHHHHHhC-CCC-CCchHHHHHHHHcCCCCc---ccceeeCCC
Q 007805 544 AATSKEFDKAF-PDR-SFQSPLVDLLLKSGRNGN---KGFSFLFVF 584 (589)
Q Consensus 544 ~~~~~~l~~~~-~~~-~~~~~~l~~~v~~g~~G~---~Gfy~y~~~ 584 (589)
+++++.+++.+ +++ +.|++++++|+++|++|+ +|||+|+.+
T Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~ 288 (483)
T 3mog_A 243 FAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAE 288 (483)
T ss_dssp HHHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSC
T ss_pred HHHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCC
Confidence 99999999886 343 448899999999999999 999999753
No 9
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=9e-55 Score=441.21 Aligned_cols=240 Identities=23% Similarity=0.364 Sum_probs=226.6
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHH-HHHHHhhcccccCCc-cC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 384 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~~ 384 (589)
.++||+|||+|+||++||..++.+|++|++||++++.++++.+++++.+.++.++|.++.. ..+..+++++.++++ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4789999999999999999999999999999999999999999999999999999988644 456677899999999 67
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCC
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t 464 (589)
+++||+|||||||++++|+++|++|++++++++||+||||+++++++++.+.+|+||+|+|||||++.+++|||++++.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCCcccccccHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---CcHHHHHHHh
Q 007805 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 538 (589)
Q Consensus 465 ~~e~~~~~~~l~~~lG~~~v~v-~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p---~Gpf~~~D~~ 538 (589)
++++++.+.++++.+|++|+++ +|.||||+||++.++++||++++++|+ +++|||+++ .++|+| ||||+++|++
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999866 899999999999999999999999997 999999999 788886 8999999999
Q ss_pred chHHHHHH
Q 007805 539 GYGVAAAT 546 (589)
Q Consensus 539 Gld~~~~~ 546 (589)
|+|+...+
T Consensus 245 G~~~~~~~ 252 (319)
T 3ado_A 245 AEGMLSYC 252 (319)
T ss_dssp TTSHHHHH
T ss_pred CccHHHHH
Confidence 99876544
No 10
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=2e-54 Score=431.22 Aligned_cols=255 Identities=38% Similarity=0.620 Sum_probs=230.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 007805 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (589)
++++.+++ +++|++|+||||+.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATEL 83 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHH
T ss_pred ccceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHH
Confidence 47899999 89999999999966999999999999999999999999999999999999999999998653221111122
Q ss_pred chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHH
Q 007805 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (589)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l 162 (589)
....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+++
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 84 AQLGQVTF-ERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 23334455 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (589)
++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 209 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATAR--------------------------------- 209 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986543
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 210 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f~ 259 (261)
T 3pea_A 210 ---AVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPSFS 259 (261)
T ss_dssp ---HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 55788888888889999999999999999999999999999999998853
No 11
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=2.8e-54 Score=431.13 Aligned_cols=256 Identities=27% Similarity=0.466 Sum_probs=232.0
Q ss_pred CCCCcEEEE-EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCC
Q 007805 1 MAAPRVTME-VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (589)
Q Consensus 1 M~~~~~~~~-~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (589)
|+|+.+.++ . +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++.... ..
T Consensus 5 m~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~ 82 (265)
T 3kqf_A 5 LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMN-EE 82 (265)
T ss_dssp --CCSEEEECC-STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCC-HH
T ss_pred ccCCeEEEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccC-HH
Confidence 678899999 7 8999999999996 6999999999999999999999999999999999 8999999999986532 11
Q ss_pred cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
....+....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 161 (265)
T 3kqf_A 83 QVRHAVSMIRTTM-EMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 161 (265)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHH
Confidence 1222233344566 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|++|++||++++|+||+++||||+|||++++++++.++|++|++.||.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3kqf_A 162 RAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVR---------------------------- 213 (265)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999986543
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 214 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3kqf_A 214 --------LAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYK 263 (265)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56788999888999999999999999999999999999999999998853
No 12
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=6e-54 Score=428.81 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=230.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (589)
|+|+.|.+++ +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 1 M~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (268)
T 3i47_A 1 MSLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEE 79 (268)
T ss_dssp -CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHH
T ss_pred CCCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHH
Confidence 8999999999 8999999999996 6999999999999999999999999999999999999999999998653222111
Q ss_pred --cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 80 --SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 80 --~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
.........++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~ 157 (268)
T 3i47_A 80 ENLEDSLVLGNLM-YSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGER 157 (268)
T ss_dssp HHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHH
Confidence 11122334555 67999999999999999999999999999999999999999999999999999987 899999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 158 ~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 209 (268)
T 3i47_A 158 AAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVK---------------------------- 209 (268)
T ss_dssp HHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999986554
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHH-HHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~-~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++.....++++ .++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 210 --------~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 261 (268)
T 3i47_A 210 --------NSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWNE 261 (268)
T ss_dssp --------HHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC-
T ss_pred --------HHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 5578888888888877 68999999999999999999999999999998644
No 13
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=6.4e-54 Score=427.72 Aligned_cols=254 Identities=32% Similarity=0.450 Sum_probs=231.5
Q ss_pred CCCCcEEEEEecCc-EEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 007805 1 MAAPRVTMEVGNDG-VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (589)
Q Consensus 1 M~~~~~~~~~~~~~-v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (589)
|+++.+.+++ +++ |++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 83 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQ- 83 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchh-
Confidence 7788899999 566 9999999997 69999999999999999999999999999999999999999999986532111
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
.+......++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 84 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 160 (263)
T 3moy_A 84 --ARERNLLSGW-DSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAK 160 (263)
T ss_dssp --HHHTTTTHHH-HHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHH
Confidence 1112233455 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 161 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 211 (263)
T 3moy_A 161 AMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGR----------------------------- 211 (263)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999986544
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 212 -------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 261 (263)
T 3moy_A 212 -------AVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFT 261 (263)
T ss_dssp -------HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCC
Confidence 56788999888999999999999999999999999999999999998863
No 14
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=8.9e-54 Score=429.14 Aligned_cols=254 Identities=30% Similarity=0.491 Sum_probs=229.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (589)
|+++.+.+++ +++|++|+||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 98 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD-- 98 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh--
Confidence 7788899999 7899999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
......... + .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 99 ~~~~~~~~~-~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 176 (278)
T 3h81_A 99 AFTADFFAT-W-GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKA 176 (278)
T ss_dssp HHHHTTTGG-G-HHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHH-H-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHH
Confidence 001111112 4 56899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 177 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------ 226 (278)
T 3h81_A 177 MDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAAR------------------------------ 226 (278)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999986544
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 227 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 276 (278)
T 3h81_A 227 ------MAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT 276 (278)
T ss_dssp ------HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56788999888999999999999999999999999999999999998863
No 15
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.9e-54 Score=431.09 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=229.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (589)
|+++.|.+++ +++|++|+||||+ .|+||.+|+++|.++++++ |+++|+|||||.|++||+|+|++++...... ..
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~ 88 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDAT-EG 88 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHH-HH
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccChh-hH
Confidence 6678899999 8999999999996 7999999999999999999 5799999999999999999999987642111 11
Q ss_pred cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
.......+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 89 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 167 (275)
T 3hin_A 89 LVHSQTWHRVF-DKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167 (275)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHH
Confidence 11223344566 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 168 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~------------------------------ 217 (275)
T 3hin_A 168 ADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNF------------------------------ 217 (275)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999986543
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++..
T Consensus 218 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 268 (275)
T 3hin_A 218 ------AVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVRE 268 (275)
T ss_dssp ------HHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC--
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 457788888888999999999999999999999999999999999998744
No 16
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=6.4e-53 Score=418.88 Aligned_cols=250 Identities=29% Similarity=0.377 Sum_probs=228.4
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccch
Q 007805 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (589)
Q Consensus 6 ~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (589)
|.++. +++|++|+||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|.|++++... . .....+..
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~-~~~~~~~~ 78 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR-K-PDYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS-C-CCHHHHTH
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhc-c-hhHHHHHH
Confidence 67888 7899999999996 7999999999999999999999999999999999999999999998653 1 11112223
Q ss_pred hHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHH
Q 007805 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (589)
Q Consensus 85 ~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l 164 (589)
..+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 157 (254)
T 3gow_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 344566 7799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhH
Q 007805 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (589)
||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 158 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3gow_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999986544
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 203 -~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 252 (254)
T 3gow_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 55788888888999999999999999999999999999999999998753
No 17
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=6.6e-53 Score=421.12 Aligned_cols=253 Identities=22% Similarity=0.345 Sum_probs=219.1
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhh---hccC
Q 007805 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ---KVHG 75 (589)
Q Consensus 1 M~-~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~---~~~~ 75 (589)
|| ++.+.++. +++|++|+||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++. ....
T Consensus 1 Ms~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T 3fdu_A 1 MSLHPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79 (266)
T ss_dssp -CCCTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence 65 57899999 8999999999996 79999999999999999999999999999999999999999999987 3222
Q ss_pred CCcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
.. .........++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~--~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 156 (266)
T 3fdu_A 80 AG--PAGQVPPFVLL-KSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAG 156 (266)
T ss_dssp CS--CGGGSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHC
T ss_pred hh--hHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhC
Confidence 11 12233445666 7799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (589)
..+|++|++||++++|+||+++||||+||| ++.+++.++|++|++.||.+++
T Consensus 157 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~-------------------------- 208 (266)
T 3fdu_A 157 YHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLK-------------------------- 208 (266)
T ss_dssp HHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999 8999999999999999987654
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++... .+++++++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 209 ----------~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~~ 258 (266)
T 3fdu_A 209 ----------QTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFSQ 258 (266)
T ss_dssp ----------HHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC---------
T ss_pred ----------HHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 3456666554 4588999999999999999999999999999999998765
No 18
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=6.6e-53 Score=424.92 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=229.7
Q ss_pred CCCCcEEEEEec--CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC
Q 007805 1 MAAPRVTMEVGN--DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77 (589)
Q Consensus 1 M~~~~~~~~~~~--~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~ 77 (589)
|+++ |.+++ + ++|++|+||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~ 99 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSRE 99 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHH
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHH
Confidence 6655 88998 7 899999999996 69999999999999999999999999999999999999999999986521111
Q ss_pred cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
....+....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|++++|..
T Consensus 100 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~ 177 (286)
T 3myb_A 100 YYEKLFARCTDVM-LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRK 177 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHH
Confidence 1122233344566 67999999999999999999999999999999999999999999999999 788999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 229 (286)
T 3myb_A 178 AAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVA---------------------------- 229 (286)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999886543
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCCC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 297 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~~ 297 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.+.
T Consensus 230 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~g~ 281 (286)
T 3myb_A 230 --------MGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWHTP 281 (286)
T ss_dssp --------HHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCCCC
Confidence 4577888888889999999999999999999999999999999999987553
No 19
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=2.1e-53 Score=425.06 Aligned_cols=256 Identities=24% Similarity=0.333 Sum_probs=228.3
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 007805 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (589)
Q Consensus 1 M~-~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (589)
|+ |+.+.+++ +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|+.||+|+|++++........
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (265)
T 3swx_A 5 MSDYETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83 (265)
T ss_dssp --CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--C
T ss_pred CCCCceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchh
Confidence 54 67899999 8999999999996 699999999999999999999999999999999999999999999875432211
Q ss_pred ccccchhHHHHHHHHH-HhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 79 VSLMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l-~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
..+.....+.+ +++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 84 -~~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 161 (265)
T 3swx_A 84 -SLTPEGGINPW-QVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWG 161 (265)
T ss_dssp -CCCCTTCCCTT-CCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred -HHHHHHHHHHH-HHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHH
Confidence 11111122334 457 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3swx_A 162 NAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQ---------------------------- 213 (265)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999986544
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 214 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3swx_A 214 --------ATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAEFV 263 (265)
T ss_dssp --------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 45778888888889999999999999999999999999999999998753
No 20
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=1.2e-52 Score=422.64 Aligned_cols=255 Identities=25% Similarity=0.361 Sum_probs=231.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc--
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV-- 79 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~-- 79 (589)
++.+.+++ +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 16 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 94 (279)
T 3g64_A 16 WRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR 94 (279)
T ss_dssp CSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhH
Confidence 56799999 7999999999996 7999999999999999999999999999999999999999999998754332211
Q ss_pred -cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCC-CChhhhhhHhhhcCHH
Q 007805 80 -SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI-PGFGGTQRLPRLVGLS 157 (589)
Q Consensus 80 -~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~-p~~g~~~~l~~~~G~~ 157 (589)
..+....+.++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|++++|..
T Consensus 95 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 95 LLDFNRMTGQVV-RAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 11222334555 67999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 225 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHA---------------------------- 225 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999986544
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 226 --------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 275 (279)
T 3g64_A 226 --------QTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKWQ 275 (279)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 45788888888899999999999999999999999999999999998864
No 21
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=8.8e-53 Score=417.90 Aligned_cols=246 Identities=23% Similarity=0.323 Sum_probs=225.6
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (589)
+.+.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++... .+
T Consensus 6 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-------~~ 77 (255)
T 3p5m_A 6 NGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-------GA 77 (255)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-------HH
T ss_pred ceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-------HH
Confidence 4689999 8999999999996 6999999999999999999999999999999999999999999987521 22
Q ss_pred chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHH
Q 007805 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (589)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l 162 (589)
....+.++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|
T Consensus 78 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l 156 (255)
T 3p5m_A 78 ADAANRVV-RAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRM 156 (255)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 33344566 77999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (589)
++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 157 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 203 (255)
T 3p5m_A 157 AMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFG--------------------------------- 203 (255)
T ss_dssp HHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986544
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 204 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 252 (255)
T 3p5m_A 204 ---WTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNF 252 (255)
T ss_dssp ---HHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 5578888888889999999999999999999999999999999998875
No 22
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=3.3e-53 Score=422.91 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=224.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCC-cCCCCchhhhh--c-cC
Q 007805 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF-SGGFDINVFQK--V-HG 75 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p-~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F-~aG~Dl~~~~~--~-~~ 75 (589)
||++.|.+++ +++|++|+|||| +.|++|.+|+.+|.++++.++.|+++|+|||||.|+.| |+|+|++++.. . ..
T Consensus 1 Ms~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 1 MSLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp --CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSS
T ss_pred CCCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCC
Confidence 8999999999 899999999999 58999999999999999999999999999999999999 99999999875 2 11
Q ss_pred CCcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
......+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG 158 (263)
T 3lke_A 80 DVRLREVLHVLNHCV-LEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158 (263)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhC
Confidence 111122233344566 7799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecC-chHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~-~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (589)
..+|++|++||++++|+||+++||||+||| ++++.+++.++|++|++.||.+++
T Consensus 159 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (263)
T 3lke_A 159 YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIA------------------------- 213 (263)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 999999999999999999999999999999 999999999999999999986554
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++++++.+
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~~ 262 (263)
T 3lke_A 214 -----------ATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHHH 262 (263)
T ss_dssp -----------HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC--------
T ss_pred -----------HHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCCC
Confidence 4577888877778999999999999999999999999999999998764
No 23
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-52 Score=424.07 Aligned_cols=255 Identities=24% Similarity=0.347 Sum_probs=224.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc----
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---- 78 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---- 78 (589)
..+.++. +++|++|+||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 4678888 8999999999996 799999999999999999999999999999999999999999998865432211
Q ss_pred --ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCC-hhhhhhHhhhcC
Q 007805 79 --VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-FGGTQRLPRLVG 155 (589)
Q Consensus 79 --~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~-~g~~~~l~~~~G 155 (589)
...+....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|++++|
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG 181 (290)
T 3sll_A 103 TIALRSMELLDEVI-LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG 181 (290)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence 111223344556 6799999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (589)
..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 235 (290)
T 3sll_A 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIE-------------------------- 235 (290)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999986554
Q ss_pred HhCCCChhHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHh-CCHHHHhHHHHHHHhhhccCCC
Q 007805 236 KTAPNMPQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~E~~~~~~~~-~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++.... .+++++++.|...+..++ .|+|++|++++|++||+|++.+
T Consensus 236 ----------~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f~g 288 (290)
T 3sll_A 236 ----------LTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEFRD 288 (290)
T ss_dssp ----------HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCCCS
T ss_pred ----------HHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 55788888888 899999999999999999 9999999999999999988643
No 24
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=4.3e-53 Score=420.89 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=190.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
+..+.++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...........
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 5 MVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred cceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 45788999 8999999999996 699999999999999999999999999999999999999999999865432222223
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
.....+.++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (256)
T 3qmj_A 84 GKFGFRGLI-KALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAW 162 (256)
T ss_dssp CSSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 334455666 7799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 210 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLM-------------------------------- 210 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999986544
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhh
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~ 291 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+
T Consensus 211 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 211 ----AVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp ----HHHHHHHCC-------------------------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 5577888888888999999999999999999999999999999985
No 25
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=2.3e-52 Score=417.46 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=221.7
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 007805 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (589)
Q Consensus 1 M~-~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (589)
|+ ++++.+++ +++|++|+||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++ ... ...
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~--~~~- 79 (265)
T 3rsi_A 5 MSAARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW--MVR- 79 (265)
T ss_dssp ----CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc--ccc-
Confidence 44 57899999 7999999999996 79999999999999999999999999999999999999999998 221 111
Q ss_pred ccccchhHHH-HHHHHH-H--hCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhc
Q 007805 79 VSLMPDVSVE-LVVNLI-E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (589)
Q Consensus 79 ~~~~~~~~~~-~~~~~l-~--~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~ 154 (589)
...+...... ++ ..+ . ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 158 (265)
T 3rsi_A 80 DGSAPPLDPATIG-KGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQI 158 (265)
T ss_dssp -----CCCHHHHH-HHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHS
T ss_pred hHHHHHHhHHHHH-HHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 1122222334 55 668 8 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 007805 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (589)
Q Consensus 155 G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (589)
|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 159 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (265)
T 3rsi_A 159 PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVR------------------------- 213 (265)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999999999999986544
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3rsi_A 214 -----------NAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREARFT 263 (265)
T ss_dssp -----------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCCCC
T ss_pred -----------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 55788888888899999999999999999999999999999999998753
No 26
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=1.2e-52 Score=420.64 Aligned_cols=257 Identities=24% Similarity=0.321 Sum_probs=229.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC---C
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG---A 76 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~---~ 76 (589)
|+ +.+.++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 1 m~-~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 78 (269)
T 1nzy_A 1 MY-EAIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGV 78 (269)
T ss_dssp CC-SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccCh
Confidence 65 5788998 7899999999996 799999999999999999999999999999999999999999998754210 0
Q ss_pred Ccc-cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 77 GDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
... ..+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 79 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 157 (269)
T 1nzy_A 79 RDHFRIAALWWHQMI-HKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157 (269)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhh
Confidence 000 11222234555 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (589)
..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 158 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------- 211 (269)
T 1nzy_A 158 MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQV-------------------------- 211 (269)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999886543
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 212 ----------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 262 (269)
T 1nzy_A 212 ----------MAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQ 262 (269)
T ss_dssp ----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTCCS
T ss_pred ----------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCC
Confidence 456788888888899999999999999999999999999999999988654
No 27
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-52 Score=449.45 Aligned_cols=307 Identities=34% Similarity=0.513 Sum_probs=267.2
Q ss_pred CCHHHHhHHHHHHHhhhccCCCCC--CC-CCCCCCccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHH
Q 007805 275 MLDTSRGLVHVFFAQRATSKVPNV--TD-IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (589)
Q Consensus 275 ~s~~~~~~i~af~~~r~~~~~~~~--~~-~~~~~~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 351 (589)
.|++++++++.|+.+|..+|.++. +. .+.+++.+++|+|||+|.||++||..++++|++|++||++++.++.+.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 389999999999999999885431 11 133456789999999999999999999999999999999999999998888
Q ss_pred HHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
++.+...+++|.+++.+.+... ...+++++.+++||+||+||||+.++|+++++++.+++++++||+||||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~~--~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKPK--LRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCC--EEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHH--hhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 8777777766643321111111 22366777889999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHc
Q 007805 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 511 (589)
Q Consensus 432 ~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~ 511 (589)
+..+.++++++|+|||+|++.++++|+++++.|++++++.+.++++.+|++++++++.|||++||++.++++|+++++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCcHHHHHHHhchHHHHHHHHHHH---HhCC-------CC-CCchHHHHHHHHcCCCCc---cc
Q 007805 512 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD---KAFP-------DR-SFQSPLVDLLLKSGRNGN---KG 577 (589)
Q Consensus 512 Gv~~~~iD~~~~~~g~p~Gpf~~~D~~Gld~~~~~~~~l~---~~~~-------~~-~~~~~~l~~~v~~g~~G~---~G 577 (589)
|+++++||.+++++|+|+|||+++|.+|||+.+++++.+. +.++ +. +.+++++++||++|++|+ +|
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~G 318 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKG 318 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBS
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcchHHHHHHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCe
Confidence 9999999999999999999999999999999999999882 2211 11 123689999999999999 99
Q ss_pred ceeeCC
Q 007805 578 FSFLFV 583 (589)
Q Consensus 578 fy~y~~ 583 (589)
||+|+.
T Consensus 319 fy~y~~ 324 (463)
T 1zcj_A 319 WYQYDK 324 (463)
T ss_dssp SEEESS
T ss_pred eccCCC
Confidence 999964
No 28
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=4.3e-52 Score=415.79 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=228.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
++.+.++. +++|++|+||||+.|++|.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++.. .. .....
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~~-~~~~~ 84 (265)
T 2ppy_A 8 KQYLTVFK-EDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-AD-PRFKT 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-SC-HHHHH
T ss_pred CCeEEEEe-eCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-cc-hhHHH
Confidence 45788998 789999999999779999999999999999999999999999999 9999999999998754 11 11111
Q ss_pred cchhH-HHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCc-eEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 82 MPDVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT-QLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 82 ~~~~~-~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a-~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
+.... ++++ .++.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|++++|..+|
T Consensus 85 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 163 (265)
T 2ppy_A 85 QFCLFCNETL-DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRA 163 (265)
T ss_dssp HHHHHHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence 22233 4566 67999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
+++++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 213 (265)
T 2ppy_A 164 LDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVS------------------------------ 213 (265)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999876543
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 214 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 262 (265)
T 2ppy_A 214 ------NIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPNW 262 (265)
T ss_dssp ------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 5577888888889999999999999999999999999999999998875
No 29
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=3.5e-53 Score=423.14 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=228.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
++.+.++. +++|++|+||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 84 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPD 84 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSC
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHH
Confidence 46789999 8999999999996 699999999999999999999999999999999999999999999865432221111
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
+.. +.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 85 ~~~--~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 161 (265)
T 3qxz_A 85 FSA--SPVQ-PAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAE 161 (265)
T ss_dssp CCS--CCSS-SCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHH
T ss_pred HHH--HHHH-HHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 211 3444 5688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhc-ChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (589)
|++||++++|+||+++||||+|||++++++++.++|++|++. ||.+++
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~------------------------------- 210 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAA------------------------------- 210 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHH-------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHH-------------------------------
Confidence 999999999999999999999999999999999999999999 886543
Q ss_pred ChhHHHHHHHHHHhhcCCHHHH--HHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 241 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~--l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++ ++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 211 -----~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f~ 262 (265)
T 3qxz_A 211 -----LTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRWA 262 (265)
T ss_dssp -----HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCCC
T ss_pred -----HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCCC
Confidence 45677888777788888 999999999999999999999999999998864
No 30
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=3e-52 Score=415.09 Aligned_cols=250 Identities=26% Similarity=0.370 Sum_probs=222.8
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (589)
+.+.++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...... ..+
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~~~ 78 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDH---GDV 78 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CH---HHH
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccch---hHH
Confidence 6789999 7899999999995 8999999999999999999999999999999999999999999987542211 111
Q ss_pred ch-hHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 83 PD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 83 ~~-~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
.. ..++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 79 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T 2ej5_A 79 LRSRYAPMM-KALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE 157 (257)
T ss_dssp HHHTHHHHH-HHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 11 134556 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
+++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 205 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIG-------------------------------- 205 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999876543
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 206 ----~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 254 (257)
T 2ej5_A 206 ----LIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLF 254 (257)
T ss_dssp ----HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCCC
Confidence 4577888888889999999999999999999999999999999998875
No 31
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=3.4e-52 Score=414.91 Aligned_cols=253 Identities=30% Similarity=0.466 Sum_probs=226.6
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 007805 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (589)
Q Consensus 1 M~-~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (589)
|+ +..+.++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus 1 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-- 77 (258)
T 2pbp_A 1 MSEFVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPI-- 77 (258)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHH--
T ss_pred CCCcceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccch--
Confidence 55 46788888 7899999999996 7999999999999999999999999999999999999999999987542210
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
...+.... +.+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 78 ~~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 155 (258)
T 2pbp_A 78 RLEWLNQF-ADW-DRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKR 155 (258)
T ss_dssp HHHHHCTT-HHH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHH-HHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHH
Confidence 01111112 445 6689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 156 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 206 (258)
T 2pbp_A 156 ALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALR----------------------------- 206 (258)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999876543
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 207 -------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 255 (258)
T 2pbp_A 207 -------LIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPRF 255 (258)
T ss_dssp -------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 4577888888889999999999999999999999999999999998775
No 32
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=1.5e-52 Score=422.25 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=223.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccC----CC
Q 007805 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHG----AG 77 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~----~~ 77 (589)
|+.+.+++ +++|++||||||+.|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~i~~~~-~~~va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSS-EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 78899999 89999999999999999999999999999999999999999999998 68999999998863210 00
Q ss_pred cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeC-CceEeccccccCCCCChhhhhhHhhhcCH
Q 007805 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (589)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~-~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~ 156 (589)
.........+.++ .++.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|++++|.
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 165 (287)
T 3gkb_A 87 SAPADVNVFQAVG-ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR 165 (287)
T ss_dssp TSCTTCCTTHHHH-HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence 1112223344566 679999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHH
Q 007805 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (589)
Q Consensus 157 ~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (589)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~--------------------------- 218 (287)
T 3gkb_A 166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIE--------------------------- 218 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999987654
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhh--ccC
Q 007805 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA--TSK 294 (589)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~--~~~ 294 (589)
.+|++++.. ...++++.|...+..++.|+|++|++++|++||+ |++
T Consensus 219 ---------~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~~~P~f 266 (287)
T 3gkb_A 219 ---------AAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGAQTPAG 266 (287)
T ss_dssp ---------HHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTTTSHHH
T ss_pred ---------HHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCch
Confidence 345566543 3468899999999999999999999999999988 543
No 33
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=2.2e-52 Score=423.07 Aligned_cols=273 Identities=28% Similarity=0.394 Sum_probs=254.5
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcC-CCCHHHHHHHhhcccccCCc-c
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
+.++||+|||+|.||++||..++++|++|++||+++++++++.+.+.+.+.+++++| .++..+.+....+++.++++ +
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 357899999999999999999999999999999999999999999999999999888 78877777778888888898 5
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCC
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~ 463 (589)
.+++||+||+|+|++.+.++.+++++.+++++++|++||||++++++++..+.++.+++|+|||+|++.++++|++++..
T Consensus 82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~ 161 (283)
T 4e12_A 82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTK 161 (283)
T ss_dssp HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTT
T ss_pred HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCC
Confidence 68999999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEE-cCCCCcccccccHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCCcHHHHHHHhch
Q 007805 464 TSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGY 540 (589)
Q Consensus 464 t~~e~~~~~~~l~~~lG~~~v~v-~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p~Gpf~~~D~~Gl 540 (589)
|++++++.++++++.+|++++++ ++.|||++||++.++++||++++++|+ ++++||+++ .++|+|+|||+++|++||
T Consensus 162 t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gl 241 (283)
T 4e12_A 162 TDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGL 241 (283)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccH
Confidence 99999999999999999999999 899999999999999999999999986 999999999 799999999999999999
Q ss_pred HHHHHHHHHHHHhCCCC-CCchHHHHHHHHcCCCCc---ccceee
Q 007805 541 GVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGN---KGFSFL 581 (589)
Q Consensus 541 d~~~~~~~~l~~~~~~~-~~~~~~l~~~v~~g~~G~---~Gfy~y 581 (589)
|++++++++ ..++. +.|++++++||++|++|+ +|||+|
T Consensus 242 d~~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 242 TTAYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 999999983 22222 237889999999999999 999999
No 34
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=2.8e-52 Score=414.19 Aligned_cols=249 Identities=28% Similarity=0.444 Sum_probs=226.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (589)
|+ +.+.+++ +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 5 m~-~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 82 (256)
T 3trr_A 5 MA-DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE 82 (256)
T ss_dssp CC-CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred CC-CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence 54 5799999 8999999999996 7999999999999999999999999999999999999999999998753221111
Q ss_pred cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
. .. . + ..+ ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 83 ~---~~--~-~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 154 (256)
T 3trr_A 83 R---GL--G-F-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVA 154 (256)
T ss_dssp T---EE--T-T-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHH
T ss_pred h---hh--h-H-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHH
Confidence 1 11 1 2 234 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 155 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 204 (256)
T 3trr_A 155 MELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVA------------------------------ 204 (256)
T ss_dssp HHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999986543
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 205 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 254 (256)
T 3trr_A 205 ------ATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVWQ 254 (256)
T ss_dssp ------HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 55788999988999999999999999999999999999999999998864
No 35
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.4e-52 Score=422.02 Aligned_cols=256 Identities=31% Similarity=0.376 Sum_probs=236.8
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
.-+||+|||+|+||++||..++ +|++|++||+++++++++.+.+ .+..+++++.+++++.++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l-----------------~~~~~~~i~~~~~~~~~~ 72 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQI-----------------PEELLSKIEFTTTLEKVK 72 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHS-----------------CGGGGGGEEEESSCTTGG
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHH-----------------HHHHhCCeEEeCCHHHHc
Confidence 3478999999999999999999 9999999999999988875530 123346788888886799
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCH
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~ 466 (589)
+||+||||+||+.++|+.+|.++.+. +++|++||||++++++++..+.++.|++|+|||+|++.++++|+++++.|++
T Consensus 73 ~aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~ 150 (293)
T 1zej_A 73 DCDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDS 150 (293)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCH
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCH
Confidence 99999999999999999999999877 8999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCCCHHHHHHHH-HhcCCCC---cHHHHHHHhchHH
Q 007805 467 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQLLDLAGYGV 542 (589)
Q Consensus 467 e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv~~~~iD~~~-~~~g~p~---Gpf~~~D~~Gld~ 542 (589)
++++.+.++++.+|++|++++|. |++||++.++++||+.++++|+++++||.++ .++|+|+ |||+++|++|||+
T Consensus 151 ~~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~ 228 (293)
T 1zej_A 151 KTVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDV 228 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHH
Confidence 99999999999999999999987 9999999999999999999999999999999 7999999 9999999999999
Q ss_pred HHHHHHHHHHhCCC-CCCchHHHHHHHHcCCCCc---ccceeeCCC
Q 007805 543 AAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGN---KGFSFLFVF 584 (589)
Q Consensus 543 ~~~~~~~l~~~~~~-~~~~~~~l~~~v~~g~~G~---~Gfy~y~~~ 584 (589)
++++++.+++.+++ ++.|++++++||++|++|+ +|||+|+++
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~~ 274 (293)
T 1zej_A 229 AYYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGPK 274 (293)
T ss_dssp HHHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCTT
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCcc
Confidence 99999999999887 4558899999999999999 999999764
No 36
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=1.4e-52 Score=421.41 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=221.6
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC-------
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG------- 75 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~------- 75 (589)
+.+.+++ +++|++|+||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 5799999 7999999999996 799999999999999999999999999999999999999999998865332
Q ss_pred CCcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
......+. ..+.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|++++|
T Consensus 90 ~~~~~~~~-~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG 166 (274)
T 3tlf_A 90 LSTYDQWE-APQEGT-PPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLP 166 (274)
T ss_dssp TCSGGGGS-CCCTTC-CCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSC
T ss_pred hhHHHHHH-HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhC
Confidence 11111111 222344 568899999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCC--CCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQ 233 (589)
Q Consensus 156 ~~~a~~l~ltg~--~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (589)
..+|++|++||+ +++|+||+++||||+|||++++++++.++|++|++.||.+++
T Consensus 167 ~~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------ 222 (274)
T 3tlf_A 167 RSIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVR------------------------ 222 (274)
T ss_dssp HHHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------
T ss_pred HHHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHH------------------------
Confidence 999999999999 999999999999999999999999999999999999986544
Q ss_pred HHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 234 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 223 ------------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 272 (274)
T 3tlf_A 223 ------------GTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPNWQ 272 (274)
T ss_dssp ------------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 55788888888899999999999999999999999999999999998753
No 37
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=5.7e-52 Score=429.26 Aligned_cols=292 Identities=19% Similarity=0.264 Sum_probs=231.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCC--c
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG--D 78 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~--~ 78 (589)
++.|.+++ +++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....... .
T Consensus 8 ~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 8 NEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 57899999 8999999999996 7999999999999999999999999999999998 6999999999986532221 1
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
...+....+.++ ..+.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 87 ~~~~~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~ 164 (353)
T 4hdt_A 87 ARRFWFDEYRLN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KL 164 (353)
T ss_dssp HHHHHHHHHHHH-HHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-TH
T ss_pred HHHHHHHHHHHH-HHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HH
Confidence 122223334555 6799999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhh-------------hhhccCCCCChHHHHH
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR-------------SLHRTDKLGSLSEARE 225 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~-------------~~~~~~~~~~~~~~~~ 225 (589)
|++|++||++++|+||+++||||+|||++++.+.+++++.+.......... .+.+.-....+....+
T Consensus 165 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~ 244 (353)
T 4hdt_A 165 GLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIA 244 (353)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999999999999999999999999999988764322110000 0000000111111111
Q ss_pred HHH-----HHHHHHHH-hCCCChhHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHhCCHHHHhHHHHHH--HhhhccCCC
Q 007805 226 VLK-----LARLQAKK-TAPNMPQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATSKVP 296 (589)
Q Consensus 226 ~~~-----~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~l~~E~~~~~~~~~s~~~~~~i~af~--~~r~~~~~~ 296 (589)
.++ .+....++ ......+...+|+.++++... +++++++.|.+.+..++.|+|++|+++||+ +||+|++.|
T Consensus 245 ~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~p 324 (353)
T 4hdt_A 245 ALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWRP 324 (353)
T ss_dssp HHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCSS
T ss_pred HHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCCC
Confidence 111 11122222 334445788899999998875 799999999999999999999999999999 999999876
Q ss_pred C
Q 007805 297 N 297 (589)
Q Consensus 297 ~ 297 (589)
.
T Consensus 325 ~ 325 (353)
T 4hdt_A 325 A 325 (353)
T ss_dssp C
T ss_pred C
Confidence 3
No 38
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=3.9e-52 Score=415.18 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=227.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CC-CCCcCCCCchhhhhccCCC
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NG-GRFSGGFDINVFQKVHGAG 77 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g-~g-~~F~aG~Dl~~~~~~~~~~ 77 (589)
|+|+.+.++. +++|++|+||||+ .|++|.+|+++|.++++.++.|+ +|+||||| .| ++||+|+|++++.......
T Consensus 1 m~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~ 78 (261)
T 1ef8_A 1 MSYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP 78 (261)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT
T ss_pred CCcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh
Confidence 8899999999 7899999999996 79999999999999999999999 99999999 98 8999999999875432111
Q ss_pred cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
. ......++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 79 -~-~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 155 (261)
T 1ef8_A 79 -L-SYDDPLRQIT-RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFH 155 (261)
T ss_dssp -T-CTTSHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHH
T ss_pred -H-HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHH
Confidence 1 1222345666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 156 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 207 (261)
T 1ef8_A 156 IVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIA---------------------------- 207 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999876543
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH--HHhCCHHHHhHHHHHHHhhhccC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~--~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+. .++.|+|++|++++|++||+|++
T Consensus 208 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~~ 258 (261)
T 1ef8_A 208 --------VIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNF 258 (261)
T ss_dssp --------HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCCC
Confidence 45677888777888999999999999 99999999999999999998875
No 39
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=4.4e-53 Score=428.32 Aligned_cols=256 Identities=25% Similarity=0.333 Sum_probs=184.0
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhh---ccCCC
Q 007805 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK---VHGAG 77 (589)
Q Consensus 3 ~~~~~~~~~~~-~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~---~~~~~ 77 (589)
++.|.+++ ++ +|++|+||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.. .....
T Consensus 28 ~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 28 QDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 47799999 77 99999999996 699999999999999999999999999999999999999999998864 11110
Q ss_pred ----cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhh
Q 007805 78 ----DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL 153 (589)
Q Consensus 78 ----~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~ 153 (589)
....+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 185 (298)
T 3qre_A 107 AKAKDANLADLVGERPP-HFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL 185 (298)
T ss_dssp --------------CCT-TGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHH-HHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHh
Confidence 1111111122334 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhc-ChhhhhhhhccCCCCChHHHHHHHHHHHH
Q 007805 154 VGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARL 232 (589)
Q Consensus 154 ~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (589)
+|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++. ||.+++
T Consensus 186 vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~~----------------------- 242 (298)
T 3qre_A 186 TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMA----------------------- 242 (298)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHHH-----------------------
T ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHHH-----------------------
Confidence 99999999999999999999999999999999999999999999999998 876543
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.+
T Consensus 243 -------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~~ 293 (298)
T 3qre_A 243 -------------VIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFPS 293 (298)
T ss_dssp -------------HHHHHHHGGGGC---------------------------------------
T ss_pred -------------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 557889988888999999999999999999999999999999999998754
No 40
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.9e-52 Score=417.67 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=225.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
...+.++. +++|++|+||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++...........
T Consensus 32 ~~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 110 (287)
T 2vx2_A 32 PRPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAE 110 (287)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHH
T ss_pred CcceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHH
Confidence 35788998 7899999999996 699999999999999999999999999999999999999999998754221111111
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |++++|..+|++
T Consensus 111 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~ 188 (287)
T 2vx2_A 111 VFQTCSKVM-MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALE 188 (287)
T ss_dssp HHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHH
Confidence 222334555 678999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 189 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------------- 236 (287)
T 2vx2_A 189 MLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVS-------------------------------- 236 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999886543
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 237 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 285 (287)
T 2vx2_A 237 ----LGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVW 285 (287)
T ss_dssp ----HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 4567888888888999999999999999999999999999999998875
No 41
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=6.1e-52 Score=414.24 Aligned_cols=253 Identities=23% Similarity=0.241 Sum_probs=225.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhc-c-CCCccc
Q 007805 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV-H-GAGDVS 80 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~-~-~~~~~~ 80 (589)
++.+.+++++++|++|+||||+.|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++ +... . ......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~ 87 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALL 87 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHH
Confidence 466888874578999999999999999999999999999999999999999999999999999999 7542 1 101011
Q ss_pred ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHH
Q 007805 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (589)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~ 160 (589)
.+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 88 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 88 RVFWEARDLV-LGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 1222344556 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 007805 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (589)
Q Consensus 161 ~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (589)
+|++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 215 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALH------------------------------- 215 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999876543
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.+... ++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 216 -----~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 263 (264)
T 1wz8_A 216 -----HTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPPEF 263 (264)
T ss_dssp -----HHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred -----HHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCCCC
Confidence 446777777777 899999999999999999999999999999998764
No 42
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-51 Score=411.51 Aligned_cols=253 Identities=18% Similarity=0.179 Sum_probs=217.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC-CCc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-AGD 78 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~ 78 (589)
|+++.+.+++ +++|++||||||+ +|++|.+|+.+|.+++++++.| ++|+|||||.|++||+|+|++++..... ...
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 81 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK 81 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH
Confidence 6788899999 8999999999996 6999999999999999999986 6999999999999999999999876421 111
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
..........++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|++++|..+
T Consensus 82 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~ 159 (267)
T 3hp0_A 82 QASSQEPLYDLW-MKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQK 159 (267)
T ss_dssp SCCCCHHHHHHH-HHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHH
Confidence 223344455666 779999999999999999999999999999999999999999999999999875 778999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|++|++||++++|+||+++||||+|||+.+ +.+.+++++|++.||.+++
T Consensus 160 A~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~----------------------------- 208 (267)
T 3hp0_A 160 AHYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIA----------------------------- 208 (267)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999998654 3478999999999986554
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++... ..++++++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 209 -------~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~~ 258 (267)
T 3hp0_A 209 -------HYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWED 258 (267)
T ss_dssp -------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC----
T ss_pred -------HHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 4466676653 3467788899999999999999999999999999999765
No 43
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=2.1e-51 Score=413.19 Aligned_cols=255 Identities=20% Similarity=0.310 Sum_probs=227.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC---c
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG---D 78 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~ 78 (589)
|+++.+++++++|++|+||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... .
T Consensus 2 ~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 81 (275)
T 1dci_A 2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDD 81 (275)
T ss_dssp CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSS
T ss_pred CceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccch
Confidence 6788999855789999999996 79999999999999999999999999999999999999999999886431110 0
Q ss_pred -c------cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHh
Q 007805 79 -V------SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (589)
Q Consensus 79 -~------~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~ 151 (589)
. ..+....+.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~ 160 (275)
T 1dci_A 82 VARIAWYLRDLISRYQKTF-TVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLP 160 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGG
T ss_pred hhhhhHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHH
Confidence 0 01112233455 678999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCH-HHHHHHHHcCCCCCHHHHHHcCCcceecCc-hHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHH
Q 007805 152 RLVGL-SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKL 229 (589)
Q Consensus 152 ~~~G~-~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~-~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (589)
+++|. .+|++|++||++++|+||+++||||+|||+ +++.+++.++|++|++.||.+++
T Consensus 161 r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~-------------------- 220 (275)
T 1dci_A 161 KVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQ-------------------- 220 (275)
T ss_dssp GTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHH--------------------
T ss_pred HHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHH--------------------
Confidence 99999 999999999999999999999999999999 99999999999999999986544
Q ss_pred HHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHh---hhccC
Q 007805 230 ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSK 294 (589)
Q Consensus 230 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~---r~~~~ 294 (589)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++| |+|++
T Consensus 221 ----------------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f 272 (275)
T 1dci_A 221 ----------------GSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITF 272 (275)
T ss_dssp ----------------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGCCC
T ss_pred ----------------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 45778888888889999999999999999999999999999999 88775
No 44
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=3.7e-52 Score=415.96 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=224.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCCccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
++.+.+++ +++|++|+||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++.........
T Consensus 8 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~- 85 (267)
T 3r9t_A 8 APGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHP- 85 (267)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCT-
T ss_pred CCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhH-
Confidence 46799999 8999999999995 7999999999999999999999999999999999 599999999998754322211
Q ss_pred ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHH
Q 007805 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (589)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~ 160 (589)
.........+ . ..++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 86 ~~~~~~~~~~-~-~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 163 (267)
T 3r9t_A 86 DHPEWGFAGY-V-RHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAM 163 (267)
T ss_dssp TCGGGCGGGT-T-TCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHH
T ss_pred HHHhHHHHHH-H-HHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHH
Confidence 1011100112 1 2489999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 007805 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (589)
Q Consensus 161 ~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (589)
+|++||++++|+||+++||||+|||++++++++.++|++|++.||.+++
T Consensus 164 ~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 212 (267)
T 3r9t_A 164 RLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQ------------------------------- 212 (267)
T ss_dssp HHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999986544
Q ss_pred ChhHHHHHHH---HHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 241 MPQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 241 ~~a~~~~~~~---~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++ ++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 213 -----~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 265 (267)
T 3r9t_A 213 -----ASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPVWQ 265 (267)
T ss_dssp -----HHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45677 777777889999999999999999999999999999999998753
No 45
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=9.3e-52 Score=414.53 Aligned_cols=254 Identities=24% Similarity=0.299 Sum_probs=216.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-----CC-CCCcCCCCchhhhhccC
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-----NG-GRFSGGFDINVFQKVHG 75 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g-----~g-~~F~aG~Dl~~~~~~~~ 75 (589)
|+.+.++. +++|++|+||||+ .|+||.+|+.+|.++++.++.|+++|+||||| .| ++||+|+|++++.....
T Consensus 9 ~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~ 87 (275)
T 4eml_A 9 YDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGY 87 (275)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-------
T ss_pred CceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccc
Confidence 67799999 8999999999996 69999999999999999999999999999999 88 49999999998864211
Q ss_pred CCcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
.............++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 88 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG 166 (275)
T 4eml_A 88 IDDQGTPRLNVLDLQ-RLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVG 166 (275)
T ss_dssp -------CCCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHC
T ss_pred cchhhHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhH
Confidence 111111111234556 6799999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (589)
..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 167 ~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 220 (275)
T 4eml_A 167 QKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIR-------------------------- 220 (275)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999986554
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 221 ----------~~K~~l~~~~~-~~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 269 (275)
T 4eml_A 221 ----------CLKAAFNADCD-GQAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFS 269 (275)
T ss_dssp ----------HHHHHHHHTTS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCT
T ss_pred ----------HHHHHHHhhhc-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 44566666543 23344457788889999999999999999999998853
No 46
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=6.7e-51 Score=416.37 Aligned_cols=279 Identities=32% Similarity=0.496 Sum_probs=258.6
Q ss_pred CCCccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHH-----HHHHHhhcccc
Q 007805 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLKG 378 (589)
Q Consensus 304 ~~~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~i~~ 378 (589)
+.++|+||+|||+|.||++||..|+++|++|++||+++++++.+.+.+.+.++.++++|.++.. ..+....+++.
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence 3456789999999999999999999999999999999999999988888888888899887654 34445567888
Q ss_pred cCCcc-CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeee
Q 007805 379 VLDYS-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 457 (589)
Q Consensus 379 ~~~~~-~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lve 457 (589)
+++++ ++++||+||+|||++.++|+++++++.+++++++||+||+|++++++++..+.++++++++||++|+..++++|
T Consensus 91 ~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~~ 170 (302)
T 1f0y_A 91 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVE 170 (302)
T ss_dssp ESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEE
T ss_pred ecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceEE
Confidence 88884 89999999999999999999999999999999999999999999999988888889999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCCcHHHHH
Q 007805 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLL 535 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p~Gpf~~~ 535 (589)
+++++.+++++++.+.++++.+|+.++++++.|||++||++.++++|+++++++|. ++++||.++ .++|||+|||+++
T Consensus 171 i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~~ 250 (302)
T 1f0y_A 171 VIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELL 250 (302)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999985 999999999 7999999999999
Q ss_pred HHhchHHHHHHHHHHHHhC-CCC-CCchHHHHHHHHcCCCCc---ccceeeC
Q 007805 536 DLAGYGVAAATSKEFDKAF-PDR-SFQSPLVDLLLKSGRNGN---KGFSFLF 582 (589)
Q Consensus 536 D~~Gld~~~~~~~~l~~~~-~~~-~~~~~~l~~~v~~g~~G~---~Gfy~y~ 582 (589)
|.+|+|+++++++.+++.+ +++ +.|+++|++|+++|++|+ +|||+|+
T Consensus 251 D~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 251 DYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 9999999999999999998 775 558999999999999999 9999994
No 47
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=3.8e-52 Score=414.38 Aligned_cols=249 Identities=27% Similarity=0.328 Sum_probs=207.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (589)
+.+.+++ +++|++|+||||+ +|++|.+|+.+|.++++.+++|+++|+|||||.|++||+|+|++++............
T Consensus 11 ~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (262)
T 3r9q_A 11 PAVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHG 89 (262)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCTTS
T ss_pred CEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHHhh
Confidence 3588999 8899999999996 6999999999999999999999999999999999999999999998654322111000
Q ss_pred chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHH
Q 007805 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (589)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l 162 (589)
...++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|
T Consensus 90 ---~~~~~-~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l 165 (262)
T 3r9q_A 90 ---PGPMG-PSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDL 165 (262)
T ss_dssp ---SCTTS-STTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred ---hhHHH-HHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 11122 34568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (589)
++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 166 ~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 212 (262)
T 3r9q_A 166 ILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVR--------------------------------- 212 (262)
T ss_dssp HHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH---------------------------------
T ss_pred HHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986554
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+ +..++.| |++|++++|++||+|.+.
T Consensus 213 ---~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p~~~ 260 (262)
T 3r9q_A 213 ---ADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGRHGA 260 (262)
T ss_dssp ---HHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC-------------------
T ss_pred ---HHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCCCCC
Confidence 55788898888999999999999 9999999 999999999999998863
No 48
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=4.6e-52 Score=418.26 Aligned_cols=254 Identities=25% Similarity=0.345 Sum_probs=216.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
++++.++. +++|++|+||||+ .|+||.+|+.+|.++++++++|+++|+|||||.|++||+|+|++++...........
T Consensus 19 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 97 (278)
T 4f47_A 19 GPDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD 97 (278)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC-------------------
T ss_pred CCceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHH
Confidence 35688999 8999999999996 799999999999999999999999999999999999999999998865432211110
Q ss_pred cchhHHHHHHHHHH---hCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 82 MPDVSVELVVNLIE---DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 82 ~~~~~~~~~~~~l~---~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
......++ +.+. ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 98 -~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~ 175 (278)
T 4f47_A 98 -GSYDPSRI-DALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTV 175 (278)
T ss_dssp ----CTTCB-TTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHH
T ss_pred -HHHHHHHH-HHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHH
Confidence 00111222 3455 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 176 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 226 (278)
T 4f47_A 176 ACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQ----------------------------- 226 (278)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999986543
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 227 -------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~f~ 276 (278)
T 4f47_A 227 -------AILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPNFQ 276 (278)
T ss_dssp -------HHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 56788999888899999999999999999999999999999999998863
No 49
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=1.2e-51 Score=411.72 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=218.5
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 007805 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 2 ~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
+++.+.+++ +++|++|+||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 13 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 91 (265)
T 3qxi_A 13 TEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEG 91 (265)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETT
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhh
Confidence 367899999 7999999999996 79999999999999999999999999999999999999999999986533211111
Q ss_pred ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHH
Q 007805 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (589)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~ 160 (589)
... . + ..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 92 --~~~--~-~-~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 164 (265)
T 3qxi_A 92 --RGL--G-F-TERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAM 164 (265)
T ss_dssp --TEE--T-T-TTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred --hhh--h-H-HHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHH
Confidence 011 1 2 22334 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 007805 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (589)
Q Consensus 161 ~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (589)
+|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 213 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVA------------------------------- 213 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999986543
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 214 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3qxi_A 214 -----ATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRWT 263 (265)
T ss_dssp -----HHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888899999999999999999999999999999999998864
No 50
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=4.2e-52 Score=416.66 Aligned_cols=252 Identities=22% Similarity=0.266 Sum_probs=216.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC-cccc
Q 007805 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (589)
++++.+++++++|++|+||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 12 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 12 FPSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp CTTEEEEECSTTEEEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 578999994458999999999999999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (272)
T 3qk8_A 92 IMREARDLV-LNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKY 170 (272)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 223344556 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
|++||++++|+||+++||||+|||++++++++.++|++|++.||.+++
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 218 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR-------------------------------- 218 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999987654
Q ss_pred hhHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 242 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.... .+++..++.| ..++.|+|++|++++|++||+|++.
T Consensus 219 ----~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f~ 267 (272)
T 3qk8_A 219 ----WTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARFT 267 (272)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC-
T ss_pred ----HHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 33445544332 2344444444 5789999999999999999998864
No 51
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=1.9e-51 Score=413.69 Aligned_cols=252 Identities=23% Similarity=0.290 Sum_probs=210.8
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc--
Q 007805 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD-- 78 (589)
Q Consensus 2 ~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~-- 78 (589)
+|+.+.++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++ +|||||.|+.||+|+|++++........
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 101 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEE 101 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHH
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhH
Confidence 467889999 7899999999995 7999999999999999999999999 9999999999999999998754221110
Q ss_pred -ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
...+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 102 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 180 (280)
T 2f6q_A 102 KAKNNAVLLREFV-GCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPA 180 (280)
T ss_dssp HHHHHHHHHHHHH-HHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHH
Confidence 001112234555 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 181 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 232 (280)
T 2f6q_A 181 KATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALR---------------------------- 232 (280)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875443
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhc
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~ 292 (589)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+|
T Consensus 233 --------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 233 --------ISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp --------HHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred --------HHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 44677777766678999999999999999999999999999999976
No 52
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=5.4e-51 Score=409.13 Aligned_cols=252 Identities=26% Similarity=0.351 Sum_probs=218.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCCCccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
|+.+.+++ +++|++|+||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|+ +||+|+|++++....... ..
T Consensus 12 ~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~-~~ 89 (273)
T 2uzf_A 12 YDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG-ED 89 (273)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------C-CS
T ss_pred CceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccch-hh
Confidence 46688998 7899999999995 89999999999999999999999999999999998 999999999875421111 11
Q ss_pred cc-chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 81 LM-PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 81 ~~-~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
.+ ......++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 90 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A 168 (273)
T 2uzf_A 90 QIPRLNVLDLQ-RLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKA 168 (273)
T ss_dssp SSCCCTHHHHH-HHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHH
T ss_pred hHHHhhHHHHH-HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHH
Confidence 11 11133555 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 169 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 218 (273)
T 2uzf_A 169 REIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR------------------------------ 218 (273)
T ss_dssp HHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999886543
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHH-HHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~-~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++ ...++.++++.|. +.+..++.|+|++|++++|++||+|++.
T Consensus 219 ------~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f~ 267 (273)
T 2uzf_A 219 ------FLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFD 267 (273)
T ss_dssp ------HHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCS
T ss_pred ------HHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCCC
Confidence 3455665 2346889999999 9999999999999999999999998753
No 53
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=3e-51 Score=411.59 Aligned_cols=255 Identities=19% Similarity=0.286 Sum_probs=206.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC--CCc-
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD- 78 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~~~- 78 (589)
|+.+.+++ +++|++|+||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 86 (276)
T 2j5i_A 8 WKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL 86 (276)
T ss_dssp CSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred CceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence 56788998 7899999999995 799999999999999999999999999999999999999999998753211 110
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
...+.......+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 166 (276)
T 2j5i_A 87 QEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQ 166 (276)
T ss_dssp HHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHH
Confidence 00111111122125578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 167 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~----------------------------- 217 (276)
T 2j5i_A 167 SLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR----------------------------- 217 (276)
T ss_dssp HHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999986554
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH--hCCH-HHHhHHHHHHHhh--hccC
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR--ATSK 294 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~--~~s~-~~~~~i~af~~~r--~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..+ +.|+ |++|++++|++|| +|++
T Consensus 218 -------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr~r~p~~ 271 (276)
T 2j5i_A 218 -------AAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDKSIKPGL 271 (276)
T ss_dssp -------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred -------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcccCCCCc
Confidence 4577888888888999999998887776 7799 9999999999998 5544
No 54
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=4e-51 Score=412.19 Aligned_cols=257 Identities=25% Similarity=0.345 Sum_probs=217.5
Q ss_pred CCCCcEEEEEec-CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCC-
Q 007805 1 MAAPRVTMEVGN-DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGA- 76 (589)
Q Consensus 1 M~~~~~~~~~~~-~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~- 76 (589)
|+++++.++. + ++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|+ +||+|+|++++......
T Consensus 24 ~~~~~v~~~~-~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 102 (289)
T 3t89_A 24 EGFEDIRYEK-STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102 (289)
T ss_dssp TTCSSEEEEE-ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC---------
T ss_pred CCCCeEEEEE-ecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccch
Confidence 4578899999 6 899999999996 69999999999999999999999999999999995 99999999987542211
Q ss_pred CcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCH
Q 007805 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (589)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~ 156 (589)
............++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|++++|.
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~ 181 (289)
T 3t89_A 103 DDSGVHHLNVLDFQ-RQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQ 181 (289)
T ss_dssp -------CTHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH
T ss_pred hhhHHHHHHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCH
Confidence 11111112234556 77999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHH
Q 007805 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (589)
Q Consensus 157 ~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (589)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 182 ~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~--------------------------- 234 (289)
T 3t89_A 182 KKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALR--------------------------- 234 (289)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999986554
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 235 ---------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~~ 284 (289)
T 3t89_A 235 ---------CLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSK 284 (289)
T ss_dssp ---------HHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCCTT
T ss_pred ---------HHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 44666766543 233444578888889999999999999999999998643
No 55
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=2.6e-51 Score=411.11 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=222.7
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC-cccc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (589)
+.+.++. +++|++|+||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 106 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAK 106 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHH
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHH
Confidence 4688999 8999999999997 79999999999999999999999999999999999999999999886532111 1112
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
+....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 107 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~e 185 (276)
T 3rrv_A 107 TIRDGREIV-LGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE 185 (276)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 223344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
+++||++++|+||+++||||+|| +++.+++.++|++|++.||.+++
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~-------------------------------- 231 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVE-------------------------------- 231 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 99999999999999999999999 88999999999999999986554
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhh
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r 290 (589)
.+|++++.....+++++++.|...+..++.|+|++|++.+|++||
T Consensus 232 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 232 ----STKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred ----HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 456777777777789999999999999999999999999999987
No 56
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=1.7e-51 Score=415.39 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=218.5
Q ss_pred CCCcEEEEEecCcEEEEEeC-CCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC--
Q 007805 2 AAPRVTMEVGNDGVAIITLI-NPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (589)
Q Consensus 2 ~~~~~~~~~~~~~v~~i~l~-~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-- 77 (589)
+|+.+.++. +++|++|+|| ||+ .|+||.+|+.+|.+++++++.|+. |+|||||.|+.||+|+|++++.......
T Consensus 21 ~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 21 TYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 467899999 8899999999 685 799999999999999999998875 9999999999999999999875421110
Q ss_pred -cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCH
Q 007805 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (589)
Q Consensus 78 -~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~ 156 (589)
....+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 177 (291)
T 2fbm_A 99 TASLEMVDTIKNFV-NTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK 177 (291)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH
Confidence 0111122234555 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHH
Q 007805 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (589)
Q Consensus 157 ~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (589)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------- 230 (291)
T 2fbm_A 178 ASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLE--------------------------- 230 (291)
T ss_dssp HHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999886543
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHH-HHhhhccCCC
Q 007805 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSKVP 296 (589)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af-~~~r~~~~~~ 296 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++.+| ++||+|++.+
T Consensus 231 ---------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f~~ 282 (291)
T 2fbm_A 231 ---------ECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAFPP 282 (291)
T ss_dssp ---------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC-----------
T ss_pred ---------HHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 45677877777778999999999999999999999999999 9999988643
No 57
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=1.2e-51 Score=411.28 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=213.4
Q ss_pred EEEEEe-cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC-CCCCcCCCCchhhhhccCCCcccccc
Q 007805 6 VTMEVG-NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMP 83 (589)
Q Consensus 6 ~~~~~~-~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (589)
+.+..+ +++|++|+||||+.|++|.+|+++|.+++++++.|+++|+|||||. |++||+|+|++++.... ......+.
T Consensus 5 v~v~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~-~~~~~~~~ 83 (260)
T 1sg4_A 5 VLVEPDAGAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRS-PAHYAGYW 83 (260)
T ss_dssp EEEEEETTTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCC-HHHHHHHH
T ss_pred EEEEEEecCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccC-HHHHHHHH
Confidence 444432 6889999999998999999999999999999999999999999999 78999999999875321 11111122
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEe--CCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~--~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
...+.++ .++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 162 (260)
T 1sg4_A 84 KAVQELW-LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAER 162 (260)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHH
Confidence 2334556 67999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 163 llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 210 (260)
T 1sg4_A 163 ALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQ-------------------------------- 210 (260)
T ss_dssp HHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999876543
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||++++
T Consensus 211 ----~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 211 ----LTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp ----HHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred ----HHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 3466777766667888899999999999999999999999999999875
No 58
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=2.3e-51 Score=409.54 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=223.9
Q ss_pred CCcEEEEEecCcEEEEEeC-CCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC---
Q 007805 3 APRVTMEVGNDGVAIITLI-NPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~-~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (589)
|+++.+++ +++|++|+|| ||+ .|++|.+|+++|.+++++++.|+ +|+|||||.|++||+|+|++++.......
T Consensus 4 ~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (261)
T 2gtr_A 4 YRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKR 81 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHH
T ss_pred cceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhh
Confidence 57799999 7899999999 685 79999999999999999999887 49999999999999999999875421111
Q ss_pred cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHH
Q 007805 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (589)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~ 157 (589)
....+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 82 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 160 (261)
T 2gtr_A 82 ESTKMAEAIRNFV-NTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 160 (261)
T ss_dssp HHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHH
Confidence 0111222234555 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 007805 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (589)
Q Consensus 158 ~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (589)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 161 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 212 (261)
T 2gtr_A 161 SANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLE---------------------------- 212 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999886543
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++.+|++||+|++
T Consensus 213 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f 261 (261)
T 2gtr_A 213 --------ESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 261 (261)
T ss_dssp --------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHC-
T ss_pred --------HHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 4567777777677899999999999999999999999999999999863
No 59
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=7e-51 Score=407.45 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=219.3
Q ss_pred CCCCcEEEE----EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC
Q 007805 1 MAAPRVTME----VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75 (589)
Q Consensus 1 M~~~~~~~~----~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~ 75 (589)
|+ +.+.++ . +++|++|+||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus 5 m~-~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 82 (267)
T 3oc7_A 5 MD-ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS 82 (267)
T ss_dssp CC-SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC---------
T ss_pred cc-cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC
Confidence 54 578888 6 7899999999996 699999999999999999999999999999999999999999998862111
Q ss_pred CCcc----cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHh
Q 007805 76 AGDV----SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (589)
Q Consensus 76 ~~~~----~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~ 151 (589)
.... ..+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (267)
T 3oc7_A 83 PSSAYDMAVERAREMAALM-RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161 (267)
T ss_dssp --CHHHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT
T ss_pred chhhhhhHHHHHHHHHHHH-HHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH
Confidence 1110 01233344566 679999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHH
Q 007805 152 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231 (589)
Q Consensus 152 ~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (589)
++|..+|+++++||++++|+||+++||||+| ++++++++.++|++|++.||.+++
T Consensus 162 -~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~---------------------- 216 (267)
T 3oc7_A 162 -KLSARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLA---------------------- 216 (267)
T ss_dssp -TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHH----------------------
T ss_pred -HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHH----------------------
Confidence 9999999999999999999999999999999 788999999999999999986554
Q ss_pred HHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 232 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 232 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 217 --------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 265 (267)
T 3oc7_A 217 --------------ASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPNW 265 (267)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCTT
T ss_pred --------------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 4567777777778999999999999999999999999999999998875
No 60
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=4e-51 Score=405.45 Aligned_cols=247 Identities=24% Similarity=0.312 Sum_probs=201.1
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCCCcCCCCchhhhhccCCCcccccc
Q 007805 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLMP 83 (589)
Q Consensus 6 ~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (589)
+.++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++...........+.
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 80 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI 80 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHH
Confidence 67788 7899999999995 79999999999999999999999999999999 999999999999886432111001122
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHH
Q 007805 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (589)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ 163 (589)
...++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..+|++++
T Consensus 81 ~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ 158 (250)
T 2a7k_A 81 DRVIDLY-QAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEII 158 (250)
T ss_dssp HHHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHH
Confidence 2234556 67999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 007805 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (589)
Q Consensus 164 ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (589)
+||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 159 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 204 (250)
T 2a7k_A 159 YQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFI---------------------------------- 204 (250)
T ss_dssp HHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHH----------------------------------
T ss_pred HcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999886543
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhh
Q 007805 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (589)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~ 291 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 205 --~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 205 --NTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred --HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 4566777777677899999999999999999999999999999974
No 61
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.3e-51 Score=410.46 Aligned_cols=247 Identities=25% Similarity=0.321 Sum_probs=193.2
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 007805 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 2 ~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
+++.+.+++ +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++........ .
T Consensus 10 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~ 87 (258)
T 3lao_A 10 GPGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASG-F 87 (258)
T ss_dssp SSCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTB-C
T ss_pred CCCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhh-H
Confidence 357799999 8999999999996 699999999999999999999999999999999999999999999876433221 1
Q ss_pred ccchhHHHHHHHHH-HhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHH
Q 007805 81 LMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 81 ~~~~~~~~~~~~~l-~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
.+.....+.+ .++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 88 ~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 166 (258)
T 3lao_A 88 RYPDGGVDPW-GVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDA 166 (258)
T ss_dssp CCCTTCCCTT-SCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 1222222334 557 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 167 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 216 (258)
T 3lao_A 167 MRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVR------------------------------ 216 (258)
T ss_dssp HHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999986543
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHH
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~ 287 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 217 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 217 ------AALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp ------HHHHHHHHHTC-------------------------------
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 557888888888999999999999999999999999999995
No 62
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=6.7e-51 Score=404.58 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=221.1
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhcc--CCCccccc
Q 007805 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH--GAGDVSLM 82 (589)
Q Consensus 6 ~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 82 (589)
+.++ +++|++|+||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.... ........
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 79 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRH 79 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHH
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHH
Confidence 4555 5789999999996 79999999999999999999999999999999999999999999886531 11000000
Q ss_pred chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHH
Q 007805 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (589)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l 162 (589)
....+.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|++++|..+|+++
T Consensus 80 ~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l 157 (253)
T 1uiy_A 80 SLSLMRLF-HRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDL 157 (253)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHH
Confidence 01134555 678999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (589)
++||++++|+||+++||||+|||++++.+++.+++++|++.||.+++
T Consensus 158 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 204 (253)
T 1uiy_A 158 LLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLR--------------------------------- 204 (253)
T ss_dssp HHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH---------------------------------
T ss_pred HHhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999876543
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhcc
Q 007805 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (589)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~ 293 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+
T Consensus 205 ---~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p~ 252 (253)
T 1uiy_A 205 ---LTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPPR 252 (253)
T ss_dssp ---HHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCCC
T ss_pred ---HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCCC
Confidence 457788888888999999999999999999999999999999998875
No 63
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=1.1e-50 Score=409.06 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=222.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCC-CcCCCCchhhhhccCCCcc--
Q 007805 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGDV-- 79 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~-F~aG~Dl~~~~~~~~~~~~-- 79 (589)
|+.+.+++ +++|++|+||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|+. ||+|+|++++.........
T Consensus 7 ~~~v~~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~ 85 (289)
T 3h0u_A 7 YETIKARL-DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAG 85 (289)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTS
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhH
Confidence 68899999 7999999999999999999999999999999999999999999999975 5667799988653211100
Q ss_pred cccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC-ceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
..+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|..+
T Consensus 86 ~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~ 164 (289)
T 3h0u_A 86 GPGDASLGMLF-RKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGR 164 (289)
T ss_dssp STTCCSHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHH
Confidence 12233445666 7799999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 165 A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~----------------------------- 215 (289)
T 3h0u_A 165 ALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALI----------------------------- 215 (289)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999986544
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHH
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 288 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~ 288 (589)
.+|++++.... +++++++.|.+.+..++.|+|++|++++|++
T Consensus 216 -------~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 216 -------AAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp -------HHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred -------HHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 45778888777 8999999999999999999999999999999
No 64
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=6.2e-51 Score=406.03 Aligned_cols=253 Identities=33% Similarity=0.432 Sum_probs=224.5
Q ss_pred CCCcEEEEEe--cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 007805 2 AAPRVTMEVG--NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (589)
Q Consensus 2 ~~~~~~~~~~--~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (589)
+|+.+.++.. .++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 80 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQD- 80 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHH-
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchH-
Confidence 4677777762 5689999999996 79999999999999999999999999999999999999999999875321100
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
.........+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 81 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 157 (260)
T 1mj3_A 81 --CYSGKFLSHW-DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157 (260)
T ss_dssp --HHHC--CCGG-GGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 0000011123 4578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (589)
|++|++||++++|+||+++||||+|||++++++++.+++++|++.||.+++
T Consensus 158 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 208 (260)
T 1mj3_A 158 AMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVA----------------------------- 208 (260)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999886543
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 209 -------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~~ 257 (260)
T 1mj3_A 209 -------MAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANF 257 (260)
T ss_dssp -------HHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 5578888888889999999999999999999999999999999998775
No 65
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=3.3e-51 Score=419.08 Aligned_cols=255 Identities=24% Similarity=0.260 Sum_probs=188.6
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-------CCcCCCCchhhhhc
Q 007805 3 APRVTMEVG-NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-------RFSGGFDINVFQKV 73 (589)
Q Consensus 3 ~~~~~~~~~-~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~-------~F~aG~Dl~~~~~~ 73 (589)
|+.|.++++ +++|++|+||||+ +|+||.+|+++|.++++.++.|+++|+|||||.|+ +||+|+|++++...
T Consensus 54 ~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~ 133 (334)
T 3t8b_A 54 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS 133 (334)
T ss_dssp CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--
T ss_pred CceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcc
Confidence 667999983 4899999999996 69999999999999999999999999999999996 89999999986432
Q ss_pred cC----C------CcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEe-CCceEeccccccCCCC
Q 007805 74 HG----A------GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIP 142 (589)
Q Consensus 74 ~~----~------~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~-~~a~~~~pe~~~Gl~p 142 (589)
.. . ............++ ++|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 134 GYQYASGDTADTVDVARAGRLHILEVQ-RLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp --------------------CCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred cccccccccchhhhHHHHHHHHHHHHH-HHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 11 0 00011111233555 67999999999999999999999999999999999 9999999999999999
Q ss_pred ChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHH
Q 007805 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222 (589)
Q Consensus 143 ~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (589)
++|++++|+|++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|++.||.+++
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~------------- 279 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQR------------- 279 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.... .+...+..|.+.+..++.|+|++|++.+|++||+|++.
T Consensus 280 -----------------------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~ 328 (334)
T 3t8b_A 280 -----------------------MLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWS 328 (334)
T ss_dssp -----------------------HHHHHHHHTCC-CC------------------------------------
T ss_pred -----------------------HHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 44667776643 45556677888899999999999999999999998864
No 66
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=3.3e-51 Score=405.90 Aligned_cols=244 Identities=25% Similarity=0.379 Sum_probs=201.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
++.+.++. +++|++|+||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... .
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~------~ 80 (256)
T 3pe8_A 8 SPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTT------E 80 (256)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhH------H
Confidence 46789999 8999999999996 69999999999999999999999999999999999999999999875421 1
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
..... ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 81 ----~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 155 (256)
T 3pe8_A 81 ----LPDIS-PKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARR 155 (256)
T ss_dssp --------C-CCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred ----HHHHH-HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHH
Confidence 11222 4578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVR-------------------------------- 203 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999986554
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHH---HhCCHHHHhHHHHHHHhhhccC
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKE---LVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~---~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+.. .+.++|++|++.+|++|+++.+
T Consensus 204 ----~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~~ 255 (256)
T 3pe8_A 204 ----ALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQV 255 (256)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCccC
Confidence 456788888888899999999999665 4777888999999999999875
No 67
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=1.3e-50 Score=404.13 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=207.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC--C-C
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--A-G 77 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~-~ 77 (589)
|+++.+.++..+++|++|+||||+.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... . .
T Consensus 3 ~~~~~~~~~~~~~~v~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 82 (263)
T 3l3s_A 3 LSQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEG 82 (263)
T ss_dssp -----CEEEEESSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCS
T ss_pred CCccceEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 346777777767899999999996699999999999999999999999999999999999999999998765310 1 1
Q ss_pred --cccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 78 --DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 78 --~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
....+......++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG 160 (263)
T 3l3s_A 83 RAFVTDLFEACSALM-LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIG 160 (263)
T ss_dssp HHHHHHHHHHHHHHH-HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcC
Confidence 0112223344555 67999999999999999999999999999999999999999999999999 5788999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (589)
..+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 161 ~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 214 (263)
T 3l3s_A 161 RRAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPLR-------------------------- 214 (263)
T ss_dssp HHHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999986544
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHh
Q 007805 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289 (589)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~ 289 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|.+.
T Consensus 215 ----------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 215 ----------RGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp ----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred ----------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 55788888888999999999999999999999999999999764
No 68
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-50 Score=400.72 Aligned_cols=242 Identities=26% Similarity=0.354 Sum_probs=211.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (589)
++.+.+++ +++|++|+||||+ .|+||.+|+.+|.++++++++| ++|+|||||.|++||+|+|++... ....
T Consensus 20 ~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~~~ 91 (264)
T 3he2_A 20 GSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FAAD 91 (264)
T ss_dssp --CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TGGG
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hhHH
Confidence 45788999 8999999999996 7999999999999999999988 999999999999999999998311 1112
Q ss_pred cchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (264)
T 3he2_A 92 YPDRLIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA 170 (264)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHH
Confidence 233344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
|++||++++|+||+++||||+|++ .+++.++|++|++.||.+++
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a~~-------------------------------- 214 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQ-------------------------------- 214 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999997 36789999999999986554
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.. .+++++++.|.+.+..++.|+|++|++.+|++||+|++.
T Consensus 215 ----~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~ 262 (264)
T 3he2_A 215 ----HAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKFQ 262 (264)
T ss_dssp ----HHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 446677765 346677888999999999999999999999999998853
No 69
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=3.4e-50 Score=402.63 Aligned_cols=243 Identities=28% Similarity=0.448 Sum_probs=216.6
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
|+ +.|.+++ +++|++|+||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ....
T Consensus 22 m~-~~v~~~~-~~~Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 98 (277)
T 4di1_A 22 MN-EFVSVVA-DQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA-PEAD 98 (277)
T ss_dssp -C-CSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH-HHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh-HHHH
Confidence 54 6799999 8999999999996699999999999999999999999999999999999999999999865321 1112
Q ss_pred ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHH
Q 007805 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (589)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~ 160 (589)
.+......++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 99 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 177 (277)
T 4di1_A 99 TAARVRLEAI-DAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAK 177 (277)
T ss_dssp HHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHH
Confidence 2233344566 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 007805 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (589)
Q Consensus 161 ~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (589)
++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 226 (277)
T 4di1_A 178 ELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALA------------------------------- 226 (277)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999986543
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhcc
Q 007805 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (589)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~ 293 (589)
.+|++++.....+++++++.|...+..++.|+ +||+|+
T Consensus 227 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~ 264 (277)
T 4di1_A 227 -----AAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDG 264 (277)
T ss_dssp -----HHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC----
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCc
Confidence 56788999999999999999999999999998 888887
No 70
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=7.3e-50 Score=400.67 Aligned_cols=253 Identities=26% Similarity=0.419 Sum_probs=220.4
Q ss_pred CcEEEEE---ecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCCc
Q 007805 4 PRVTMEV---GNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD 78 (589)
Q Consensus 4 ~~~~~~~---~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~ 78 (589)
..+.++. .+++|++|+||||+ .|++|.+|+++|.++++.+++|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~ 86 (272)
T 1hzd_A 8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-SE 86 (272)
T ss_dssp CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-HH
T ss_pred CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-HH
Confidence 3455553 25789999999996 7999999999999999999999999999999998 69999999998754211 11
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
...+....++++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 87 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 165 (272)
T 1hzd_A 87 VGPFVSKIRAVI-NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSL 165 (272)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHH
Confidence 111222334555 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHH----HHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEEL----LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l----~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (589)
|++|++||++++|+||+++||||+|||++++ .+.+.+++++|+..||.+++
T Consensus 166 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~~------------------------- 220 (272)
T 1hzd_A 166 AKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMR------------------------- 220 (272)
T ss_dssp HHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHH-------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999998874 45778888888887775433
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 221 -----------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 269 (272)
T 1hzd_A 221 -----------VAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRY 269 (272)
T ss_dssp -----------HHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCC
T ss_pred -----------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 4577888888889999999999999999999999999999999999875
No 71
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=5.3e-49 Score=409.28 Aligned_cols=290 Identities=23% Similarity=0.320 Sum_probs=226.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCCc--
Q 007805 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD-- 78 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~-- 78 (589)
.+.+.+++ +++|++|+||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~ 83 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI 83 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence 45688998 7899999999996 7999999999999999999999999999999998 89999999998864321111
Q ss_pred ccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHH
Q 007805 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (589)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~ 158 (589)
...+......++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|. +
T Consensus 84 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 84 APVFFREEYMLN-NAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 111112223445 67899999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccC------------CC---------
Q 007805 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD------------KL--------- 217 (589)
Q Consensus 159 a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~------------~~--------- 217 (589)
|++|++||++++|+||+++||||+|||++++.+.+.++++ +...++..+..+++.- .+
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 240 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINS 240 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999998776554432 2222222221111100 00
Q ss_pred ----CChHHHHHHH-----HHHHHHHHHhCCCCh-hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHH
Q 007805 218 ----GSLSEAREVL-----KLARLQAKKTAPNMP-QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (589)
Q Consensus 218 ----~~~~~~~~~~-----~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~ 287 (589)
+......+.+ ..+...+++-..+.| +...+|++++.+...+++++++.|...+..++.|+|++|++++|+
T Consensus 241 ~f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 241 CFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HTTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 0001101111 011122333333344 677899999999999999999999999999999999999999999
Q ss_pred -Hh-hhccCCC
Q 007805 288 -AQ-RATSKVP 296 (589)
Q Consensus 288 -~~-r~~~~~~ 296 (589)
+| |+|++.+
T Consensus 321 ~eK~r~P~~~~ 331 (363)
T 3bpt_A 321 IDKDQSPKWKP 331 (363)
T ss_dssp TSCCCCCCCSS
T ss_pred eCCCCCCCCCC
Confidence 78 8877644
No 72
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=2.7e-49 Score=392.62 Aligned_cols=243 Identities=19% Similarity=0.294 Sum_probs=205.3
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (589)
..+.+++ +++|++|+||||+ .|++|.+|+++|.++++.+++ +++|+|||||.|++||+|+|++++....... ....
T Consensus 7 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 83 (254)
T 3isa_A 7 LPLAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGD-LLLR 83 (254)
T ss_dssp CSEEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHH-HHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchh-HHHH
Confidence 3488999 8999999999996 899999999999999999987 5899999999999999999999876432111 1111
Q ss_pred chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHH
Q 007805 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (589)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l 162 (589)
....+.++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++++|++++|..+|+++
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l 159 (254)
T 3isa_A 84 MVRIEMLL-QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSI 159 (254)
T ss_dssp HHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHH
Confidence 11234555 679999999999999999999999999999999999999999999999998 47999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (589)
++||++++|+||+++||||+|||++++.+++.++++++++.|+.+++
T Consensus 160 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 206 (254)
T 3isa_A 160 LGSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRA--------------------------------- 206 (254)
T ss_dssp HTTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986544
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCCC
Q 007805 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (589)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~~ 296 (589)
.+|+++. .+.++.|.+.+..++.|+|++|++.+|++||+|.+.+
T Consensus 207 ---~~K~~l~-------~~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~~ 250 (254)
T 3isa_A 207 ---TLHRVLR-------DDHDDADLAALARSAAQPGFKARIRDYLAQPAAEGHH 250 (254)
T ss_dssp ---HHHHHHS-------CCCHHHHHHHHHHHHHSTTHHHHHHHHHHC-------
T ss_pred ---HHHHHHh-------hhhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 2344442 1234568889999999999999999999999999865
No 73
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=4.1e-49 Score=388.73 Aligned_cols=238 Identities=23% Similarity=0.296 Sum_probs=213.7
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccch
Q 007805 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (589)
Q Consensus 6 ~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (589)
..++. +++|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... . ..
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~-~~-- 79 (243)
T 2q35_A 5 QLTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGE-V-EV-- 79 (243)
T ss_dssp EEEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTC-C-CC--
T ss_pred EEEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchh-h-HH--
Confidence 34566 7899999999995 79999999999999999999999999999999999999999999876432111 1 11
Q ss_pred hHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHH
Q 007805 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (589)
Q Consensus 85 ~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l 164 (589)
++++ .++.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+++++
T Consensus 80 --~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 156 (243)
T 2q35_A 80 --LDLS-GLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIY 156 (243)
T ss_dssp --CCCH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred --HHHH-HHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHH
Confidence 2344 5688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhH
Q 007805 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (589)
||++++|+||+++||||+|||++++.+++.++++++++.||.+++
T Consensus 157 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 201 (243)
T 2q35_A 157 TGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLV----------------------------------- 201 (243)
T ss_dssp HCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHH-----------------------------------
T ss_pred cCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999886544
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHH
Q 007805 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (589)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~ 287 (589)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 202 -~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 202 -ALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred -HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 446677777666788999999999999999999999999874
No 74
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=1.2e-48 Score=393.84 Aligned_cols=245 Identities=18% Similarity=0.187 Sum_probs=205.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc-
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (589)
|+|+.+.+++ +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~ 84 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN 84 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccccccc
Confidence 6677899999 7899999999995 799999999999999999999999999999999999999999998754211110
Q ss_pred --cc---ccc----hhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEe-CCceEeccccccCCCCChhhhh
Q 007805 79 --VS---LMP----DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIPGFGGTQ 148 (589)
Q Consensus 79 --~~---~~~----~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~-~~a~~~~pe~~~Gl~p~~g~~~ 148 (589)
.. .+. ...+.++ ..+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~ 163 (280)
T 1pjh_A 85 KYPSETSKWVSNFVARNVYVT-DAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTV 163 (280)
T ss_dssp CCSSHHHHHHHHTHHHHHHHH-HHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHH
Confidence 00 011 1113455 67899999999999999999999999999999999 9999999999999999999999
Q ss_pred hHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCch-----HHHHHHH-HHHHHHHhcChhhhhhhhccCCCCChHH
Q 007805 149 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSE 222 (589)
Q Consensus 149 ~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~-----~l~~~a~-~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (589)
+|++++|..+|++|++||++++|+||+++||||+|||++ ++.+++. ++|++|++.||.+++
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~------------- 230 (280)
T 1pjh_A 164 SLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCL------------- 230 (280)
T ss_dssp HHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHH-------------
T ss_pred HHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHH-------------
Confidence 999999999999999999999999999999999999885 7888885 999999999986554
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccCC
Q 007805 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (589)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~~ 295 (589)
.+|++++.... ..++ ...++|+++++.+|++||++..+
T Consensus 231 -----------------------~~K~~l~~~~~----~~l~--------~~~~~d~~e~~~af~~kr~~e~~ 268 (280)
T 1pjh_A 231 -----------------------GMKKLLKSNHI----DAFN--------KANSVEVNESLKYWVDGEPLKRF 268 (280)
T ss_dssp -----------------------HHHHHHHTTTH----HHHH--------HHHHHHHHHHHHHHHHTHHHHHH
T ss_pred -----------------------HHHHHHHHhHH----HHHH--------HhhhHHHHHHHHHHhCCccHHHH
Confidence 34566655432 2222 12478999999999999988433
No 75
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=3.1e-49 Score=415.04 Aligned_cols=286 Identities=17% Similarity=0.232 Sum_probs=224.1
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCC-----
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA----- 76 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~----- 76 (589)
+.+.+++ +++|++||||||+ +|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 42 ~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~ 120 (407)
T 3ju1_A 42 QTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQV 120 (407)
T ss_dssp EEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSC
T ss_pred ceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhccccccccc
Confidence 4566666 7899999999996 7999999999999999999999999999999999 799999999988643110
Q ss_pred -CcccccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 77 -GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 77 -~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
.....+......++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 121 ~~~~~~~~~~~~~l~-~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g 199 (407)
T 3ju1_A 121 TEVAKVFFEEEYRLD-YLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG 199 (407)
T ss_dssp CHHHHHHHHHHHHHH-HHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH
Confidence 10111222233455 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHH---H----------------HHHHHHHHHhcC-----h------
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARR-----K------ 205 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~---~----------------a~~~a~~la~~~-----~------ 205 (589)
.+|++|++||++++|+||+++||||+|||++++.+ + +.++++++.... +
T Consensus 200 -~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~ 278 (407)
T 3ju1_A 200 -KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAES 278 (407)
T ss_dssp -THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHT
T ss_pred -HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHH
Confidence 99999999999999999999999999999999877 3 333333332111 0
Q ss_pred -hhhhhhhccCCCCChHHHHHHHH-------HHHHHHHH-hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC
Q 007805 206 -PWIRSLHRTDKLGSLSEAREVLK-------LARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 276 (589)
Q Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s 276 (589)
..+.... . .++....+.++ .++...++ ....-.+...+|++++++...+++++++.|...+..++.+
T Consensus 279 ~~~I~~~f---~-~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s 354 (407)
T 3ju1_A 279 QEMIDRLM---A-GSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAK 354 (407)
T ss_dssp HHHHHHHT---C-SCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh---c-CCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC
Confidence 0011010 0 11111111110 11111111 2234447788999999999999999999999999999999
Q ss_pred HHHHhHHHHHH-Hh-hhccCCC
Q 007805 277 DTSRGLVHVFF-AQ-RATSKVP 296 (589)
Q Consensus 277 ~~~~~~i~af~-~~-r~~~~~~ 296 (589)
+|++|++++|+ +| |+|++.+
T Consensus 355 ~D~~EGvrAflidKdr~P~w~~ 376 (407)
T 3ju1_A 355 GDFCEGVRALLIDKDKQPKWQF 376 (407)
T ss_dssp SSHHHHHHHHTTSCCCCCCCSS
T ss_pred HHHHHHHHHHHhcCCcCCCCCC
Confidence 99999999998 88 8888765
No 76
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=5.7e-48 Score=378.12 Aligned_cols=229 Identities=23% Similarity=0.256 Sum_probs=201.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
|+ +.+.+++ +++|++|+||||+.|++|.+|+++|.++++++++| ++|+|||||.|++||+|+|++++..... ....
T Consensus 3 M~-~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~-~~~~ 78 (233)
T 3r6h_A 3 MS-GPVTYTH-DDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEA-KPAI 78 (233)
T ss_dssp ---CCEEEEE-ETTEEEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---C-HHHH
T ss_pred CC-CceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccCh-HHHH
Confidence 55 5789999 89999999999989999999999999999999987 6899999999999999999999865321 1112
Q ss_pred ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHH
Q 007805 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (589)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~ 160 (589)
.+....++++ .++.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 79 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~ 157 (233)
T 3r6h_A 79 DMLRGGFELS-YRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQ 157 (233)
T ss_dssp HHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHH
Confidence 2233344566 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 007805 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (589)
Q Consensus 161 ~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (589)
++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 206 (233)
T 3r6h_A 158 QAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHN------------------------------- 206 (233)
T ss_dssp HHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999987554
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 007805 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVF 270 (589)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~ 270 (589)
.+|++++.....+++++++.|...|
T Consensus 207 -----~~K~~l~~~~~~~l~~~l~~e~~~f 231 (233)
T 3r6h_A 207 -----ATKLRARAEALKAIRAGIDGIEAEF 231 (233)
T ss_dssp -----HHHHHTTHHHHHHHHHHHHTSHHHH
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 4567777777778888888888776
No 77
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=8.2e-48 Score=382.75 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=204.9
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 007805 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (589)
Q Consensus 3 ~~~~~~~~~~~-~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (589)
|+.+.+++ ++ +|++|+||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 22 ~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 22 YENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp CTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 56789999 67 99999999996 79999999999999999999999999999999999999999999875421111111
Q ss_pred ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEec-cccccCCCCChhhhhhHhhhcCHHHH
Q 007805 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKA 159 (589)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~-pe~~~Gl~p~~g~~~~l~~~~G~~~a 159 (589)
.+......++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|++++|..+|
T Consensus 101 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A 178 (263)
T 2j5g_A 101 KTYWEGKKVL-QNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRG 178 (263)
T ss_dssp HHHHHHHHHH-HHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence 1122233555 6789999999999999999 5999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 007805 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (589)
Q Consensus 160 ~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (589)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 179 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 228 (263)
T 2j5g_A 179 RYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLR------------------------------ 228 (263)
T ss_dssp HHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999886554
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhh
Q 007805 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (589)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r 290 (589)
.+|++++.....+++++++.| ...|++++|++||
T Consensus 229 ------~~K~~l~~~~~~~l~~~l~~e-----------~~~eg~~af~~~~ 262 (263)
T 2j5g_A 229 ------YTRVALTQRLKRLVNEGIGYG-----------LALEGITATDLRN 262 (263)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHTTC
T ss_pred ------HHHHHHHhhhhccHHHHHHHH-----------HHHhhHHHHHhcc
Confidence 446667666555555555544 4569999999987
No 78
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.5e-47 Score=374.91 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=200.2
Q ss_pred CcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 007805 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (589)
+.+.++. +++|++||||||+.|++|.+|+++|.+++++++.| +|+|||||.|++||+|+|++++.... .....+.
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~--~~~~~~~ 80 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSA--EAAINLV 80 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCH--HHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhCh--HHHHHHH
Confidence 4688998 89999999999989999999999999999999976 48999999999999999999986521 1112233
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC-ceEeccccccCCCCChhhhhhHhhhcCHHHHHHH
Q 007805 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (589)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l 162 (589)
...+.++ +++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++++++++++++|..+|+++
T Consensus 81 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l 159 (232)
T 3ot6_A 81 AQGSTLA-RRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRS 159 (232)
T ss_dssp HHHHHHH-HHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHH
Confidence 3344566 7799999999999999999999999999999999998 8999999999999888999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (589)
++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 160 ~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 206 (232)
T 3ot6_A 160 VINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHK--------------------------------- 206 (232)
T ss_dssp HTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986554
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 007805 243 QHQACLDVIEEGIVHGGYSGVLKEAKVF 270 (589)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~ 270 (589)
.+|++++.....+++++++.|.+.|
T Consensus 207 ---~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 207 ---KTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 4577888888788899999888754
No 79
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=3.5e-46 Score=379.33 Aligned_cols=254 Identities=19% Similarity=0.190 Sum_probs=215.5
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEcCCCCCcCCCCchhhh
Q 007805 3 APRVTMEVG-NDGVAIITLINPP-----VNALAIPIVAGLKDKFEEATS-----RDDVKAIVLTGNGGRFSGGFDINVFQ 71 (589)
Q Consensus 3 ~~~~~~~~~-~~~v~~i~l~~p~-----~N~l~~~~~~~l~~~l~~~~~-----~~~v~~vvl~g~g~~F~aG~Dl~~~~ 71 (589)
|+++.+..+ +++|++|+||||+ +|++|.+|+.+|.++++.++. |+++|+|||||.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 556666543 7889999999994 459999999999999999987 58999999999999999999999986
Q ss_pred hccCCCccc---ccchhHHHHHHHHH---HhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChh
Q 007805 72 KVHGAGDVS---LMPDVSVELVVNLI---EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFG 145 (589)
Q Consensus 72 ~~~~~~~~~---~~~~~~~~~~~~~l---~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g 145 (589)
......... .+.......+ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 187 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGV-HAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMG 187 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-HHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSS
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCcc
Confidence 532111111 1111122222 223 468999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHH
Q 007805 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 225 (589)
Q Consensus 146 ~~~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~ 225 (589)
++++|++++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|++ +|.+++
T Consensus 188 ~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a~~---------------- 250 (305)
T 3m6n_A 188 AYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPHAWA---------------- 250 (305)
T ss_dssp HHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHHHHH----------------
T ss_pred HHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChHHHH----------------
Confidence 999999999999999999999999999999999999999999999999999999986 554332
Q ss_pred HHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhccC
Q 007805 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (589)
Q Consensus 226 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~~~ 294 (589)
.+|++++.....+++++++.|.+.+..++.|+|....+..++-+++-++
T Consensus 251 --------------------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~ 299 (305)
T 3m6n_A 251 --------------------AMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRR 299 (305)
T ss_dssp --------------------HHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--
T ss_pred --------------------HHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhc
Confidence 5678899999999999999999999999999999888777776666554
No 80
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=6.9e-46 Score=381.76 Aligned_cols=204 Identities=25% Similarity=0.338 Sum_probs=174.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (589)
|+|++|.+++ +++|++|+||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~ 110 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC-------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccc
Confidence 4578899999 8999999999996 7999999999999999999999999999999999999999999988653211100
Q ss_pred ---------------------c--------ccchhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCce
Q 007805 80 ---------------------S--------LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130 (589)
Q Consensus 80 ---------------------~--------~~~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~ 130 (589)
. .+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~ 189 (333)
T 3njd_A 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGF-ASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK 189 (333)
T ss_dssp --CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHH-THHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence 0 0111223344 568899999999999999999999999999999999999
Q ss_pred EeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhh
Q 007805 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (589)
Q Consensus 131 ~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (589)
|++||+++|++|++| +|++++|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 190 f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~ 265 (333)
T 3njd_A 190 IGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLI 265 (333)
T ss_dssp EECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred eechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999876 5899999999999999999999999999999999999999999999999999999987654
No 81
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=6.9e-46 Score=368.24 Aligned_cols=237 Identities=18% Similarity=0.235 Sum_probs=200.8
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (589)
+.+.+++ +++|++|+||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .......+
T Consensus 16 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~ 93 (257)
T 1szo_A 16 ENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG-TPHDWDEI 93 (257)
T ss_dssp TTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCS-SHHHHHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcC-CHHHHHHH
Confidence 5689999 7899999999995 7999999999999999999999999999999999999999999987521 11111111
Q ss_pred chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEec-cccccCCCCChhhhhhHhhhcCHHHHHH
Q 007805 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (589)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~-pe~~~Gl~p~~g~~~~l~~~~G~~~a~~ 161 (589)
.....+++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|++++|..+|++
T Consensus 94 ~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ 171 (257)
T 1szo_A 94 IFEGQRLL-NNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 171 (257)
T ss_dssp HHHHHHHH-HHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHH
Confidence 12234555 6789999999999999999 5999999999999999999999 9999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (589)
+++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 219 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARR-------------------------------- 219 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999986554
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhh
Q 007805 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (589)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~ 291 (589)
.+|++++.....+++++++.|.. .+++.+|-.+-+
T Consensus 220 ----~~K~~l~~~~~~~l~~~l~~~~~-----------~eg~~a~~~~~~ 254 (257)
T 1szo_A 220 ----YARKVLTRQLRRVMEADLSLGLA-----------HEALAAIDLGME 254 (257)
T ss_dssp ----HHHHHHSHHHHHHHHHHHHHHHH-----------HHHHHHHHHC--
T ss_pred ----HHHHHHHhhhhccHHHHHHHHHH-----------Hhhhhhhhcccc
Confidence 34566666655556666665543 367888876543
No 82
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=9e-46 Score=387.91 Aligned_cols=246 Identities=23% Similarity=0.215 Sum_probs=201.1
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC--------C-CCCcCCCCchhhhhc
Q 007805 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN--------G-GRFSGGFDINVFQKV 73 (589)
Q Consensus 4 ~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~--------g-~~F~aG~Dl~~~~~~ 73 (589)
+.+.++. +++|++|+||||+ .|+||.+|+++|.++++.++.|+++|+|||||. | ++||+|+|++++...
T Consensus 167 ~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 167 EAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp SSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred ceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 4688888 7899999999995 799999999999999999999999999999994 6 799999999998643
Q ss_pred cCCCccc---ccchhHHHHHHHHH------------HhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEecccccc
Q 007805 74 HGAGDVS---LMPDVSVELVVNLI------------EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138 (589)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~~~l------------~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~ 138 (589)
....... ........++ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~l 324 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLV-RGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKE 324 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHH-HCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTT
T ss_pred CcchhhhhhHHHHHHHHHHH-HHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhcc
Confidence 2111000 0001122333 323 47999999999999999999999999999999999999999999
Q ss_pred CCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCC
Q 007805 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG 218 (589)
Q Consensus 139 Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~ 218 (589)
|++|++| +++|++++|..+|++|++||++++|+||+++||||+|||++++.+++.+++++++. .++
T Consensus 325 Gl~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~---~Av---------- 390 (440)
T 2np9_A 325 GIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---DAV---------- 390 (440)
T ss_dssp CCCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---HHH----------
T ss_pred CcCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---HHH----------
Confidence 9999887 68999999999999999999999999999999999999999999999998887642 221
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCH---HHHHHHHHHHHHHHhCCHHHHhHHHHHHHhhhc
Q 007805 219 SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG---YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (589)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~l~~E~~~~~~~~~s~~~~~~i~af~~~r~~ 292 (589)
..+|++++.... ++ .+.+..|...+..++.|+|++|++.+|++||++
T Consensus 391 --------------------------~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~a 440 (440)
T 2np9_A 391 --------------------------LANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPPA 440 (440)
T ss_dssp --------------------------HHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC-----
T ss_pred --------------------------HHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCCC
Confidence 244566666544 33 355667788899999999999999999999864
No 83
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=4.9e-45 Score=372.86 Aligned_cols=263 Identities=22% Similarity=0.338 Sum_probs=231.3
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCH-HHHHHHhhcccccCCc-c
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ-DKANNALKMLKGVLDY-S 383 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~~~-~ 383 (589)
+.++||+|||+|+||++||..|+++|++|++||+++++++++.+++++.+..+++.|.++. ......++++++++++ +
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 4578999999999999999999999999999999999999999999999998888875431 0123456788888998 6
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCC
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~ 463 (589)
++++||+||+||||++++|+++|+++.+++++++||+|+||+++++++++.+.++.+++|+|||+|++.++++|+++++.
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~ 163 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPE 163 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTT
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCC
Confidence 79999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEE-cCCCCcccccccHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---CcHHHHHHH
Q 007805 464 TSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDL 537 (589)
Q Consensus 464 t~~e~~~~~~~l~~~lG~~~v~v-~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p---~Gpf~~~D~ 537 (589)
|++++++.++++++.+|++|+++ ++.|||++||++.++++||++++++|+ ++++||.++ .++|+| +|||+++|+
T Consensus 164 t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl 243 (319)
T 2dpo_A 164 TSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHL 243 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHh
Confidence 99999999999999999999999 689999999999999999999999987 999999999 789987 899999999
Q ss_pred hchHHHHHHHH-------HHHHhCCC-CCCchHHHHHHHH
Q 007805 538 AGYGVAAATSK-------EFDKAFPD-RSFQSPLVDLLLK 569 (589)
Q Consensus 538 ~Gld~~~~~~~-------~l~~~~~~-~~~~~~~l~~~v~ 569 (589)
+| +.+.+.++ .++..+++ +.+.++++.++++
T Consensus 244 ~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (319)
T 2dpo_A 244 NA-EGMLSYSDRYSEGMKRVLKSFGSIPEFSGATVEKVNQ 282 (319)
T ss_dssp TT-TSHHHHHHHHHHHHHHHHHTCCCCCCCCHHHHHHHHH
T ss_pred cC-chHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 97 65555444 44556775 3345566666554
No 84
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=2.8e-45 Score=368.55 Aligned_cols=205 Identities=27% Similarity=0.346 Sum_probs=174.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 007805 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (589)
Q Consensus 1 M~~~~~~~~~~~~~v~~i~l~~p~-~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (589)
|+|+.+.+++ +++|++|+||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~ 95 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTL 95 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCH
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccch
Confidence 4578899999 8999999999996 7999999999999999999999999999999999999999999988653211110
Q ss_pred -ccc---chhHHHHHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcC
Q 007805 80 -SLM---PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (589)
Q Consensus 80 -~~~---~~~~~~~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G 155 (589)
..+ ......++ .++.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+++++.+ ++++|
T Consensus 96 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~~-~~~vG 172 (279)
T 3t3w_A 96 EFIYAHESRRYLEYS-LRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHGH-TWELG 172 (279)
T ss_dssp HHHHHHHHHHTHHHH-HHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCCH-HHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHHH-HhhcC
Confidence 011 11223445 6789999999999999999999999999999999999999999999999 55555544 99999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhh
Q 007805 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (589)
Q Consensus 156 ~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (589)
..+|+++++||++++|+||+++||||+|||++++++++.++|++|++.||.+++
T Consensus 173 ~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~ 226 (279)
T 3t3w_A 173 PRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALR 226 (279)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999999986554
No 85
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=6.4e-41 Score=353.10 Aligned_cols=275 Identities=20% Similarity=0.252 Sum_probs=214.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-----------CCCCCHHHHHHHHHHHHHHhcC-CCceEEEEEc-CCCCCcCCCCchh
Q 007805 3 APRVTMEVGNDGVAIITLINPP-----------VNALAIPIVAGLKDKFEEATSR-DDVKAIVLTG-NGGRFSGGFDINV 69 (589)
Q Consensus 3 ~~~~~~~~~~~~v~~i~l~~p~-----------~N~l~~~~~~~l~~~l~~~~~~-~~v~~vvl~g-~g~~F~aG~Dl~~ 69 (589)
|+++.++. +++|++|+||||+ .|++|.+|+.+|.+++++++.| +++|+||||| .|+.||+|+|+++
T Consensus 20 ~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~e 98 (556)
T 2w3p_A 20 YKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFM 98 (556)
T ss_dssp CSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHH
T ss_pred CceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHH
Confidence 45788998 7899999999995 6999999999999999999999 9999999999 8999999999999
Q ss_pred hhhccCCCcccccchhHHHHHHHHH----HhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC--ceEeccccc-cCCCC
Q 007805 70 FQKVHGAGDVSLMPDVSVELVVNLI----EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK--TQLGLPELT-LGVIP 142 (589)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~--a~~~~pe~~-~Gl~p 142 (589)
+...... ....+....+.++ ..+ .++||||||+|||+|+|||++|+++||+|||+++ ++|++||++ +|++|
T Consensus 99 l~~~~~~-~~~~~~~~~~~l~-~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~P 176 (556)
T 2w3p_A 99 LGLSTHA-WKVNFCKFTNETR-NGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLP 176 (556)
T ss_dssp HHHSCHH-HHHHHHHHHHHHH-HHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCC
T ss_pred HhhcccH-HHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCC
Confidence 8653211 1111222334555 567 8999999999999999999999999999999999 999999999 99999
Q ss_pred ChhhhhhHh--hhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhhhhhhhccCCCCCh
Q 007805 143 GFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 220 (589)
Q Consensus 143 ~~g~~~~l~--~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~ 220 (589)
++|++++|+ |++|..+|+++++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++. ++... .++
T Consensus 177 g~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~~-K~l~~-~~l 254 (556)
T 2w3p_A 177 GTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHA-QGVPL-TRI 254 (556)
T ss_dssp TTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTTC-CCCCC-CCC
T ss_pred CccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHhh-hhhhc-chh
Confidence 999999999 99999999999999999999999999999999999999999999999999999877653 22111 111
Q ss_pred HH-----------HHHHHHHHHHH-HHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHH-HhHHHHHH
Q 007805 221 SE-----------AREVLKLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS-RGLVHVFF 287 (589)
Q Consensus 221 ~~-----------~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~-~~~i~af~ 287 (589)
.. ....+..+++. ..+.++..|+|.++++++..... .+..+..++|. ...++.|+
T Consensus 255 ~r~~~~~gl~y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~------------~~~~l~~~~el~~All~l~~ 322 (556)
T 2w3p_A 255 ERTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGA------------NWWPLKFAREFDDAILSMRT 322 (556)
T ss_dssp CCEEETTEEEETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGG------------GSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhccccHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhh------------cchhhhhhhHHHHHHHhhhh
Confidence 00 00001111111 11445666777777777765443 22333333444 55777888
Q ss_pred HhhhccC
Q 007805 288 AQRATSK 294 (589)
Q Consensus 288 ~~r~~~~ 294 (589)
+.+....
T Consensus 323 ne~~~~~ 329 (556)
T 2w3p_A 323 NELAVGT 329 (556)
T ss_dssp HCSSCCE
T ss_pred ccHHHhH
Confidence 7766543
No 86
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.91 E-value=3.8e-24 Score=230.10 Aligned_cols=149 Identities=11% Similarity=0.079 Sum_probs=136.9
Q ss_pred ecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHH
Q 007805 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (589)
Q Consensus 421 s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~ 500 (589)
..+++.+.++. ...+|.++++.|+++ .+++|+++++.|++++++.+.++++.+|+.|++++|.||||+||++.+
T Consensus 323 ~~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~ 396 (483)
T 3mog_A 323 IETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAM 396 (483)
T ss_dssp EECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHH
T ss_pred cccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHH
Confidence 35667776666 345678999999988 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC-CHHHHHHHH-HhcCCCCcHHHHHHHhchHHHHHHHHHHHHhCCC-CCCchHHHHHHHHcCCCCc
Q 007805 501 YSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGN 575 (589)
Q Consensus 501 ~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~-~~~~~~~l~~~v~~g~~G~ 575 (589)
++|||++|+++|+ +++|||.++ .|+|||+|||+|+|.+|+|+++++++.|++.+++ ++.|+++|++|+++|++|.
T Consensus 397 ~~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~ 474 (483)
T 3mog_A 397 IINEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYE 474 (483)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCC
Confidence 9999999999999 999999999 9999999999999999999999999999999987 5569999999999997766
No 87
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.87 E-value=2.7e-23 Score=178.20 Aligned_cols=98 Identities=20% Similarity=0.129 Sum_probs=81.8
Q ss_pred HcCCeeE-EEcCCCCcccccccHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCCcHHHHHHHhchHHHHHHHHHHHHhC
Q 007805 478 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (589)
Q Consensus 478 ~lG~~~v-~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv-~~~~iD~~~-~~~g~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (589)
.++|.+| +++|.||||+||++.+++|||++++++|+ +++|||.++ .++|||+|||+++|.+|+|+++++++++++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999 88999999999999999999999999997 999999999 89999999999999999999999999999998
Q ss_pred CC-CCCchHHHHHHHHcCCCCc
Q 007805 555 PD-RSFQSPLVDLLLKSGRNGN 575 (589)
Q Consensus 555 ~~-~~~~~~~l~~~v~~g~~G~ 575 (589)
++ ++.|+++|++|+++|++|+
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~ 104 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKA 104 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHH
T ss_pred CCCcCCCCHHHHHHHHcCCCCc
Confidence 88 5669999999999999998
No 88
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.83 E-value=3.2e-21 Score=212.59 Aligned_cols=169 Identities=20% Similarity=0.207 Sum_probs=143.4
Q ss_pred cCcEEEEEeCCCC-CCC--CCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHH
Q 007805 12 NDGVAIITLINPP-VNA--LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVE 88 (589)
Q Consensus 12 ~~~v~~i~l~~p~-~N~--l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 88 (589)
+++|++|++|+|. .|+ ++..+.++|.++|+.++.|+++|+|||++.+ .|+|+.... ...+
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~-------------~i~~ 362 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE-------------VIRA 362 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH-------------HHHH
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH-------------HHHH
Confidence 5789999999994 677 6889999999999999999999999999875 477776421 1224
Q ss_pred HHHHHHHhCCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEecccc------------ccCCCCCh------------
Q 007805 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL------------TLGVIPGF------------ 144 (589)
Q Consensus 89 ~~~~~l~~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~------------~~Gl~p~~------------ 144 (589)
.+ +++..++|||||+|+|.|.|||+.|+++||+++|++++.|+.+++ ++|+.|+.
T Consensus 363 ~i-~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~ 441 (593)
T 3bf0_A 363 EL-AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 (593)
T ss_dssp HH-HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTT
T ss_pred HH-HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcC
Confidence 45 568889999999999999999999999999999999999999985 68987642
Q ss_pred -hhh---------------hhHhhhcCHHH-----HHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHH
Q 007805 145 -GGT---------------QRLPRLVGLSK-----AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198 (589)
Q Consensus 145 -g~~---------------~~l~~~~G~~~-----a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~ 198 (589)
+.+ .++++.++..+ +.+++++|+.++|+||+++||||++++.+++.+++.+++.
T Consensus 442 ~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~ 516 (593)
T 3bf0_A 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK 516 (593)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence 223 56788888888 9999999999999999999999999998888877776543
No 89
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.82 E-value=7.4e-21 Score=194.88 Aligned_cols=206 Identities=17% Similarity=0.199 Sum_probs=161.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+||+|||+|.||.+||..|+.+|+ +|++||+++++++.....+..... ......++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV------------MFGSTSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh------------hcCCCcEEEECCCHHHhCC
Confidence 589999999999999999999999 999999999887753222211100 0001235666677888999
Q ss_pred CCEEEEec--------------cCChHHHHHHHHHHHHhCCCCcEE--EecCCCCCHHHHhcccCC-CCcEEEecCCCCC
Q 007805 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 450 (589)
Q Consensus 388 aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~~-~~r~ig~h~~~p~ 450 (589)
||+||+|+ +++..+++++++++.++++ ++++ +||++.+....+...... ++|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7888999999999999975 7777 577666666666666555 6788874
Q ss_pred CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCccccc---ccHHHHHHH-------HHHHHcCC-CHHHHH
Q 007805 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 519 (589)
Q Consensus 451 ~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nR---i~~~~~~Ea-------~~l~~~Gv-~~~~iD 519 (589)
.|+.++......+.+.+|+. .++.+||++|| .++++++++ ..++++|+ +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 36788888888899999987 48999999999 899999998 89999996 999999
Q ss_pred HHHHhcCCCCcHHHHHHHhch-HHHHHHHHHH
Q 007805 520 SAIRSFGLPIGPFQLLDLAGY-GVAAATSKEF 550 (589)
Q Consensus 520 ~~~~~~g~p~Gpf~~~D~~Gl-d~~~~~~~~l 550 (589)
.++... ++||++++|..|. ++.+.+....
T Consensus 211 ~~~~~~--~~~~~ei~~~~g~g~~~~~~a~a~ 240 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADNLKTGTAYFAPAAAA 240 (317)
T ss_dssp HHHHHH--HHHHHHHHHHHSSSCCCHHHHHHH
T ss_pred HHHHHH--HhhHHHHHHhhcCCchHHHHHHHH
Confidence 998422 7899999999887 6555544333
No 90
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.81 E-value=2.7e-19 Score=175.18 Aligned_cols=167 Identities=19% Similarity=0.184 Sum_probs=130.2
Q ss_pred cCcEEEEEeCCC-CCCC-----CC--HHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 007805 12 NDGVAIITLINP-PVNA-----LA--IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (589)
Q Consensus 12 ~~~v~~i~l~~p-~~N~-----l~--~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (589)
+++|++|.++.+ ..+. ++ .-.+++|.++|+.+++|+++|+|||++. |.|+|+....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------ 65 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------ 65 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence 468999999877 2221 11 0136899999999999999999999987 5788886532
Q ss_pred hhHHHHHHHHHHh-CCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEecc---------------------ccccCCC
Q 007805 84 DVSVELVVNLIED-CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP---------------------ELTLGVI 141 (589)
Q Consensus 84 ~~~~~~~~~~l~~-~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~p---------------------e~~~Gl~ 141 (589)
...+.+ +.+.. ++|||||+++|.|.|||++|+++||++++++++.|+.+ +++.|..
T Consensus 66 -~i~~~l-~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~ 143 (240)
T 3rst_A 66 -EIHKKL-EEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAH 143 (240)
T ss_dssp -HHHHHH-HHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTT
T ss_pred -HHHHHH-HHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecccc
Confidence 122444 45666 89999999999999999999999999999999999999 6677777
Q ss_pred CChhhh--------------------------hhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecCchHHHHHHHH
Q 007805 142 PGFGGT--------------------------QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL 195 (589)
Q Consensus 142 p~~g~~--------------------------~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~ 195 (589)
++.+.. +.-.|.+....... +++|+.+++++|+++||||++.+.+++.+.+.+
T Consensus 144 k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~ 222 (240)
T 3rst_A 144 ADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK 222 (240)
T ss_dssp TTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 766522 22345566555555 789999999999999999999998887776666
Q ss_pred HH
Q 007805 196 WA 197 (589)
Q Consensus 196 ~a 197 (589)
++
T Consensus 223 ~~ 224 (240)
T 3rst_A 223 DH 224 (240)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 91
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.80 E-value=4.6e-19 Score=178.17 Aligned_cols=188 Identities=15% Similarity=0.111 Sum_probs=146.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC---eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
.+||+|||+|+||.+||..|+++|+ +|++||++++++++..++ . .+..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------~-------------gi~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------C-------------GVHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------T-------------CCEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------c-------------CCEEeCChHH
Confidence 4689999999999999999999999 999999999987775321 0 23445554 7
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHh-CCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeee-EecC
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE-IVRT 461 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lve-iv~~ 461 (589)
.+++||+||+||| ++.+.++++++.++ ++++++|+|++++++++.+...++.+.++++.||++|...+..++ ++++
T Consensus 60 ~~~~aDvVilav~--p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVK--PHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSC--GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeC--HHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 7899999999997 56788999999998 899989999999999999999888888999999999999888776 4578
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--------CCcccccccHHHHHHHH--HHHHcCCCHHHHHHHH
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--------TGFAVNRAFFPYSQSAR--LLVSLGVDVFRIDSAI 522 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--------~Gfi~nRi~~~~~~Ea~--~l~~~Gv~~~~iD~~~ 522 (589)
+.++++.++.+.++++.+|+.+++..+. .|.- . -+..++.|++ ..++.|+++++.-+++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v~~E~~~d~~talsgsg-p-a~~~~~~eal~~a~v~~Gl~~~~a~~l~ 206 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSG-P-AYIFLIMEALQEAAEQLGLTKETAELLT 206 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEECSSHHHHHHHHHHTTSH-H-HHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEECCHHHhhHHHHHhccH-H-HHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8899999999999999999855442321 1100 1 1222334554 2346688777665554
No 92
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.78 E-value=3.6e-19 Score=177.84 Aligned_cols=211 Identities=10% Similarity=0.014 Sum_probs=156.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCe-EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
+||+|||+|.||..+|..|++.|++ |.+||+++++++...+.+ .+..++++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-----------------------EAEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-----------------------TCEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-----------------------CCceeCCHHHHhc
Confidence 5799999999999999999999998 999999998877643210 13345566 6678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCC-----CCCCeeeEecC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 461 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~-----~~~~lveiv~~ 461 (589)
++|+||+|+|++ ...+++.++.+.++++++|++++++.+.+.+.+.+..+ -..|+++|. ..++.+.++-
T Consensus 68 ~~Dvvi~av~~~--~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDS--AFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHY---GVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHH--HHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSE---EEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHH--HHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhc---cCcCCceecCCCchhhcCCCeEEE-
Confidence 999999999955 34788899998898999999999999887766555432 235666642 1223333332
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--CCc-----cccccc--HHHHHHHHHHHHcCCCHHHHHHHH-H--------
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-R-------- 523 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--~Gf-----i~nRi~--~~~~~Ea~~l~~~Gv~~~~iD~~~-~-------- 523 (589)
..++++.++.+.++++.+|++++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 3458999999999999999999999754 356 677775 344556643 46799888875444 2
Q ss_pred hc-CCCCcHHHHHHHhchHHHHHHHHH
Q 007805 524 SF-GLPIGPFQLLDLAGYGVAAATSKE 549 (589)
Q Consensus 524 ~~-g~p~Gpf~~~D~~Gld~~~~~~~~ 549 (589)
+. +.++||+...|..|++..+..++.
T Consensus 221 ~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred ChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 21 357899999999999998776654
No 93
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.78 E-value=1.4e-18 Score=167.39 Aligned_cols=152 Identities=24% Similarity=0.328 Sum_probs=127.5
Q ss_pred cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHH
Q 007805 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91 (589)
Q Consensus 12 ~~~v~~i~l~~p~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 91 (589)
.+.|++|++++ ++++.+.+.|.++|+.++++ ++|+|+|+.. |.|+|+... ..++
T Consensus 7 ~~~V~vI~i~g----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~----------------~~i~- 60 (230)
T 3viv_A 7 KNIVYVAQIKG----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM----------------MNIV- 60 (230)
T ss_dssp CCEEEEEEEES----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH----------------HHHH-
T ss_pred CCeEEEEEEeC----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH----------------HHHH-
Confidence 46799999984 79999999999999999864 6999999875 677776532 2455
Q ss_pred HHHHhCCCcEEEEe---CCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhh---------------hhHhhh
Q 007805 92 NLIEDCKKPIVAAV---EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGT---------------QRLPRL 153 (589)
Q Consensus 92 ~~l~~~~kp~iaav---~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~---------------~~l~~~ 153 (589)
+.|..++||||++| +|.|.|+|+.|+++||+++++++++|+.+++..+. |..|.+ ..+++.
T Consensus 61 ~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~ 139 (230)
T 3viv_A 61 QRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQE 139 (230)
T ss_dssp HHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 66889999999999 99999999999999999999999999999987533 545542 247778
Q ss_pred cCH--HHHHHHHHcCCCCCHHHHHHcCCcceecCc-hHHH
Q 007805 154 VGL--SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELL 190 (589)
Q Consensus 154 ~G~--~~a~~l~ltg~~~~a~~A~~~Glv~~vv~~-~~l~ 190 (589)
.|+ ..+.+++.+++.++|+||+++||||+|+++ ++++
T Consensus 140 ~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~~~~ll 179 (230)
T 3viv_A 140 SGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELL 179 (230)
T ss_dssp TTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSSHHHHH
T ss_pred hCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCCHHHHH
Confidence 885 789999999999999999999999999975 3443
No 94
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.76 E-value=8.9e-18 Score=171.38 Aligned_cols=166 Identities=14% Similarity=0.151 Sum_probs=131.2
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
+.++||+|||+|.||++||..|+++|+ +|++||+++++++.+. +.|.++ ..++++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-----------~~G~~~-----------~~~~~~~ 88 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGIID-----------EGTTSIA 88 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSCS-----------EEESCTT
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-----------HCCCcc-----------hhcCCHH
Confidence 346899999999999999999999999 9999999998877652 223211 234555
Q ss_pred c-CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC--------
Q 007805 383 S-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-------- 451 (589)
Q Consensus 383 ~-~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~-------- 451 (589)
+ .+++||+||+|||.+ ...++++++.++++++++|++.+|+.. ++.+.+.++. +|++.||+.++.
T Consensus 89 ~~~~~~aDvVilavp~~--~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~--~~v~~hPm~G~e~sG~~~A~ 164 (314)
T 3ggo_A 89 KVEDFSPDFVMLSSPVR--TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSL 164 (314)
T ss_dssp GGGGGCCSEEEECSCGG--GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEECCCCCCCSGGGCC
T ss_pred HHhhccCCEEEEeCCHH--HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC--CEEecCcccCCcccchhhhh
Confidence 5 689999999999954 467889999999999999988776543 4455554432 899999988653
Q ss_pred ----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCcccccc
Q 007805 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRA 497 (589)
Q Consensus 452 ----~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v-~d~~Gfi~nRi 497 (589)
.+..+.+++++.++++.++.+.++++.+|++++++ .+....++..+
T Consensus 165 ~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~ 215 (314)
T 3ggo_A 165 DNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVV 215 (314)
T ss_dssp TTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHH
T ss_pred hhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 35678899999999999999999999999999988 34555555554
No 95
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.75 E-value=2.2e-18 Score=170.18 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=144.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC----eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
++||+|||+|.||.+||..|+++|+ +|++||+++++++...+.. .+..+++.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~ 58 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-----------------------GLTTTTDNN 58 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-----------------------CCEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-----------------------CCEEeCChH
Confidence 3689999999999999999999998 9999999999877653211 23344555
Q ss_pred cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC-eeeEecC
Q 007805 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRT 461 (589)
Q Consensus 383 ~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveiv~~ 461 (589)
+.++++|+||+|+| +....++++++.++++++++|+|.+++++++.+...+....++++.||+.|..... .+.++++
T Consensus 59 e~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 136 (247)
T 3gt0_A 59 EVAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPN 136 (247)
T ss_dssp HHHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeC
Confidence 66789999999997 55678889999999999999999999999998888877777899999999998777 6677888
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCC-----Cccc-ccccHHHHHHHHH--HHHcCCCHHHHHHHH
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAV-NRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-----Gfi~-nRi~~~~~~Ea~~--l~~~Gv~~~~iD~~~ 522 (589)
+.++++.++.++++++.+|+ ++++.+.. +... -..+...+.|++. ..+.|+++++.-+++
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88999999999999999999 55553211 0000 0012234456664 346699998887777
No 96
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.73 E-value=6.8e-18 Score=170.83 Aligned_cols=189 Identities=15% Similarity=0.157 Sum_probs=134.9
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.|+||+|||+|.||.+||.+|+++||+|++||+++++.+.. .+.| .+..+++ +.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l-----------~~~G-------------a~~a~s~~e~~ 57 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-----------VAAG-------------ASAARSARDAV 57 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHTT-------------CEECSSHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-----------HHcC-------------CEEcCCHHHHH
Confidence 47899999999999999999999999999999999988764 2223 3445566 678
Q ss_pred CCCCEEEEeccCChHHHHHHHHH--HHHhCCCCcEEEecCCCCCHH--HHhcccCCCCcEEEecCCCCC--------CCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSE--LEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPA--------HVM 453 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~--l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~~~r~ig~h~~~p~--------~~~ 453 (589)
++||+||.|+|++.+++..++.. +.+.++++.+|++.|+..+-+ ++++.+... |.+|.+.| ..+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~G 133 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAAG 133 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHHT
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHhC
Confidence 99999999999777665555432 677788888887655433322 344433321 45555444 233
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-Cc---cccccc-H---HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 007805 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT-GF---AVNRAF-F---PYSQSARLLVSL-GVDVFRIDSAI-R 523 (589)
Q Consensus 454 ~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-Gf---i~nRi~-~---~~~~Ea~~l~~~-Gv~~~~iD~~~-~ 523 (589)
.+..++.| +++++++++++++.+|++++++++.. |. ++|.++ . ..+.|++.+.+. |++++.+-.++ .
T Consensus 134 ~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~ 210 (300)
T 3obb_A 134 TLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRR 210 (300)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred CEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 45667777 79999999999999999999997632 22 234433 2 234599988876 89999988887 5
Q ss_pred hcC
Q 007805 524 SFG 526 (589)
Q Consensus 524 ~~g 526 (589)
+.+
T Consensus 211 ~~~ 213 (300)
T 3obb_A 211 SSG 213 (300)
T ss_dssp STT
T ss_pred Ccc
Confidence 443
No 97
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.73 E-value=2.1e-17 Score=168.19 Aligned_cols=191 Identities=15% Similarity=0.150 Sum_probs=137.7
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
+|+||+|||+|.||.+||..|+++|++|++||+++++++...+ .| +..++++ +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------AG-------------ASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------TT-------------CEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CC-------------CeEcCCHHHHH
Confidence 3689999999999999999999999999999999998776422 12 3445565 668
Q ss_pred CCCCEEEEeccCChHHHHHHHH---HHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCCC----CCCe
Q 007805 386 KDVDMVIEAVIESVPLKQKIFS---ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH----VMPL 455 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~---~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~~----~~~l 455 (589)
++||+||+|+|++..++. ++. ++.+.++++++|++.++..+.. .+...+. ...+|+. +|..+.. ...+
T Consensus 58 ~~aDvvi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~-~pv~~~~~~~~~g~l 135 (302)
T 2h78_A 58 QGADVVISMLPASQHVEG-LYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAGAAAGTL 135 (302)
T ss_dssp TTCSEEEECCSCHHHHHH-HHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE-CCEESCHHHHHHTCE
T ss_pred hCCCeEEEECCCHHHHHH-HHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE-EEccCChhhHhcCCc
Confidence 899999999997665544 444 7788888998887655544332 3444433 2335555 3433321 2234
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCcc---cccccHH----HHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 007805 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFFP----YSQSARLLVSL-GVDVFRIDSAI-RSF 525 (589)
Q Consensus 456 veiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~Gfi---~nRi~~~----~~~Ea~~l~~~-Gv~~~~iD~~~-~~~ 525 (589)
+.++.+ +++.++.+.++++.+|++++++++ ..|.. +|+++.+ +++|++.++++ |+++++++.++ .+.
T Consensus 136 ~~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 212 (302)
T 2h78_A 136 TFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSS 212 (302)
T ss_dssp EEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred eEEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 555555 799999999999999999999976 23333 5666543 78899988876 89999999998 544
Q ss_pred C
Q 007805 526 G 526 (589)
Q Consensus 526 g 526 (589)
+
T Consensus 213 ~ 213 (302)
T 2h78_A 213 G 213 (302)
T ss_dssp T
T ss_pred C
Confidence 3
No 98
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.70 E-value=1.9e-17 Score=166.15 Aligned_cols=210 Identities=10% Similarity=-0.035 Sum_probs=141.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
+||+|||+|.||.+||..|+++ ++| .+||+++++++.+.+. .+. .++++ +.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~----------------------~g~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEV----------------------YGG--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHH----------------------TCC--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHH----------------------cCC--ccCCHHHHHh
Confidence 5799999999999999999988 999 5999999887664221 111 34455 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecC----CCCCCC-CCeeeEecC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF----FSPAHV-MPLLEIVRT 461 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~----~~p~~~-~~lveiv~~ 461 (589)
++|+||+|+|++. ..+++.++. +++++|++.+++.+.+.+... .+.+.|+ .+++.. ....++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999765 567776654 677888876667777665433 4556774 332321 112222222
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--C------CcccccccHHHHHHHHHHHH-cCCCH----------HHHHHHH
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--T------GFAVNRAFFPYSQSARLLVS-LGVDV----------FRIDSAI 522 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--~------Gfi~nRi~~~~~~Ea~~l~~-~Gv~~----------~~iD~~~ 522 (589)
...+++.++.++++++.+|++++.+++. + ++..| .+..++.|+..+++ .|++. ..+|.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~ 206 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIK 206 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 2235667899999999999999988642 1 34444 66677889888887 59944 4677766
Q ss_pred -Hh-cCCCCcHHHHHHHhchHHHHHHHHHHHHhC
Q 007805 523 -RS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (589)
Q Consensus 523 -~~-~g~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (589)
.+ .+.++||++..|..+++..++.++.+++.+
T Consensus 207 ~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 207 KMRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp HSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred hcChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 44 566789999999999999999999886554
No 99
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.70 E-value=1.2e-16 Score=162.50 Aligned_cols=192 Identities=13% Similarity=0.127 Sum_probs=136.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
.+||+|||+|.||.+||..|+++|++|++||+++++++...+ .| ....++++ +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g------------~~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-----------EG------------ACGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT------------CSEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------cC------------CccccCCHHHHHh
Confidence 468999999999999999999999999999999998776422 22 12224455 6789
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC----CCCCeee
Q 007805 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPLLE 457 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~----~~~~lve 457 (589)
+||+||+|+|++..++..++ +++.+.++++++|++.++..+.. .+...+. ...+|+. ||.... ....++.
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 142 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTV 142 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEE
Confidence 99999999997666554444 66788899999887655543322 3333332 2334555 543211 1224455
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------ccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 007805 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~g 526 (589)
++.+ ++++++.++++++.+|++++++++.+| ++.|.+. ...++|++.+.++ |++++++..++ .+.+
T Consensus 143 ~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 219 (303)
T 3g0o_A 143 MASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAG 219 (303)
T ss_dssp EEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT
T ss_pred EeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 6655 789999999999999999999987555 2334443 3457899988876 89999999998 5443
No 100
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.70 E-value=2.4e-17 Score=168.31 Aligned_cols=193 Identities=11% Similarity=0.086 Sum_probs=138.8
Q ss_pred CCccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 305 ~~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
...|+||+|||+|.||.+||..|+++|++|++||+++++++...+ .| +..++++ +
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g-------------~~~~~~~~~ 73 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------HG-------------ASVCESPAE 73 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TT-------------CEECSSHHH
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeEcCCHHH
Confidence 345789999999999999999999999999999999998776421 12 3445555 6
Q ss_pred CCCCCCEEEEeccCChHHHHHHH--HHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC----CCCC
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMP 454 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~----~~~~ 454 (589)
.+++||+||+|+|++..++..++ .++.+.++++++|++.++..+.. .+...+. ...+|+. ||.... ....
T Consensus 74 ~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~ 152 (310)
T 3doj_A 74 VIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQ 152 (310)
T ss_dssp HHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTC
T ss_pred HHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCC
Confidence 67899999999997666554443 66888889999887655443322 2333222 2334544 432211 1234
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------ccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH-H
Q 007805 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-R 523 (589)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~ 523 (589)
++.++.+ ++++++.++++++.+|++++++++ +| ++.|.++ ...++|++.+.+. |++++++..++ .
T Consensus 153 l~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 228 (310)
T 3doj_A 153 LIILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDL 228 (310)
T ss_dssp EEEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred eEEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 5556665 689999999999999999999976 55 5556654 3456899998876 89999999998 5
Q ss_pred hcC
Q 007805 524 SFG 526 (589)
Q Consensus 524 ~~g 526 (589)
+.+
T Consensus 229 ~~~ 231 (310)
T 3doj_A 229 GAM 231 (310)
T ss_dssp STT
T ss_pred ccc
Confidence 443
No 101
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.70 E-value=3.4e-17 Score=166.00 Aligned_cols=185 Identities=19% Similarity=0.166 Sum_probs=134.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
.+||+|||+|.||.+||..|+++|++|++||+++++++.+.+ . .+..++++ +.++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~ 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-----------A-------------GATLADSVADVAA 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-----------T-------------TCEECSSHHHHTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCEEcCCHHHHHh
Confidence 358999999999999999999999999999999998776422 1 24556666 5567
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeeeEec
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVR 460 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lveiv~ 460 (589)
||+||+|+|++..+ ++++.++.+.++++++|++.++..+.. .+...+. ...+|+....+.++ ....+..++.
T Consensus 71 -aDvvi~~vp~~~~~-~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~g 148 (296)
T 3qha_A 71 -ADLIHITVLDDAQV-REVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVG 148 (296)
T ss_dssp -SSEEEECCSSHHHH-HHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEE
T ss_pred -CCEEEEECCChHHH-HHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEec
Confidence 99999999976554 455688999999999887665544332 3333332 22344443222221 2234556666
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cccccccH---HHHHHHHHHHHc-CCCHHHH------HHHH
Q 007805 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAFF---PYSQSARLLVSL-GVDVFRI------DSAI 522 (589)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi~~---~~~~Ea~~l~~~-Gv~~~~i------D~~~ 522 (589)
+ ++++++.++++++.+|++++++++ +| ++.|.+.. ..++|++.+.++ |++++++ ..++
T Consensus 149 g---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 149 A---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp C---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 6 789999999999999999999976 55 45565543 347899998876 8999999 8777
No 102
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.68 E-value=2.2e-17 Score=168.64 Aligned_cols=189 Identities=14% Similarity=0.056 Sum_probs=129.0
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCC--hHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
+.++||+|||+|.||.+||..|+++|+ +|++||++ +++.+.+. +. .+..++++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-----------~~-------------g~~~~~~~ 77 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-----------EL-------------GVSCKASV 77 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-----------HT-------------TCEECSCH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-----------HC-------------CCEEeCCH
Confidence 346799999999999999999999999 99999997 45554431 11 23445555
Q ss_pred -cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-C--CCcEEEecCCCC--CCCCC
Q 007805 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-S--QDRIIGAHFFSP--AHVMP 454 (589)
Q Consensus 383 -~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~--~~r~ig~h~~~p--~~~~~ 454 (589)
+.+++||+||+|||++... +++.++.+.++++++|++.+|..+.. .+...+. . ..+|+....+.| .....
T Consensus 78 ~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g~ 155 (312)
T 3qsg_A 78 AEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHR 155 (312)
T ss_dssp HHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGGG
T ss_pred HHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcCC
Confidence 6688999999999977755 56789999999999988776654433 2222222 1 234444222221 12235
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----ccccccH----HHHHHHHHHHHc-CCCHHHHHHHHHh
Q 007805 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAIRS 524 (589)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gf-----i~nRi~~----~~~~Ea~~l~~~-Gv~~~~iD~~~~~ 524 (589)
+..+++++.+ +.++++++.+|+.++++++.+|. ++|.++. ..++|++.+.+. |++++.++.+..+
T Consensus 156 l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~l~~~ 230 (312)
T 3qsg_A 156 VPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLASLDAS 230 (312)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 6777777543 78999999999999999876663 2344433 667899988877 8988666543344
Q ss_pred c
Q 007805 525 F 525 (589)
Q Consensus 525 ~ 525 (589)
.
T Consensus 231 ~ 231 (312)
T 3qsg_A 231 F 231 (312)
T ss_dssp S
T ss_pred C
Confidence 4
No 103
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.68 E-value=3.6e-17 Score=165.51 Aligned_cols=191 Identities=12% Similarity=0.069 Sum_probs=128.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
+||||||+|.||.+||.+|+++||+|++||+++++.+.. .+.| ....+++ +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcC-------------CeEeCCHHHHHhc
Confidence 589999999999999999999999999999999886653 2222 3445555 77899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeeeEecC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVRT 461 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lveiv~~ 461 (589)
||+||.|+|++..+...+..++.+.++++.++++.++..+-+ ++.+.+. +..+|+.......+ ....+..++.+
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG 141 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSG 141 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeeccc
Confidence 999999999877777666677888889998887655433322 3333332 22233332221111 12233445555
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----cccccc----HHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gf-----i~nRi~----~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~g 526 (589)
+++++++++++++.+|+.++++++.+|- ++|.++ ...+.|++.+.+. |++++++-.++ .+.+
T Consensus 142 ---~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~ 214 (297)
T 4gbj_A 142 ---NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLF 214 (297)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTT
T ss_pred ---chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcc
Confidence 7899999999999999999999876662 234443 3345699988876 99999988887 4444
No 104
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.68 E-value=2.5e-17 Score=166.40 Aligned_cols=191 Identities=13% Similarity=0.090 Sum_probs=134.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-----------L-------------GARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-----------H-------------TCEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHH
Confidence 468999999999999999999999999999999998776432 1 23455566 6678
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeeeE
Q 007805 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEI 458 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lvei 458 (589)
+||+||+|+|++..++..++ .++.+.++++++|++.++..+.. .+...+. ...+|+..+.+.++ ....+..+
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~ 136 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIIL 136 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEE
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEE
Confidence 99999999997666554444 66788888888887655543322 2333222 22344443222211 11233445
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------ccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 007805 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (589)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~g 526 (589)
+.+ ++++++.++++++.+|++++++++ +| ++.|.+. ...++|++.+.+. |++++++..++ .+.+
T Consensus 137 ~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~ 211 (287)
T 3pdu_A 137 AAG---DQSLFTDAGPAFAALGKKCLHLGE-VGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAM 211 (287)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTT
T ss_pred EeC---CHHHHHHHHHHHHHhCCCEEEcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 544 789999999999999999999976 44 2335543 3456899988866 89999999998 5443
No 105
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.67 E-value=9.9e-17 Score=161.93 Aligned_cols=189 Identities=13% Similarity=0.073 Sum_probs=135.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------L-------------GAERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHhc
Confidence 58999999999999999999999999999999998776422 1 23455666 66789
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC----CCCCeeeE
Q 007805 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPLLEI 458 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~----~~~~lvei 458 (589)
||+||+|+|++..++..++ .++.+.++++++|++.++..+.. .+...+. ...+|+. ||..+. ....++.+
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~ 136 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLIIL 136 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEEE
Confidence 9999999997666555544 77888999999887664433322 2333222 2334555 443222 12244556
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------ccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 007805 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (589)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~g 526 (589)
+.+ ++++++.++++++.+|++++++++ +| ++.|-+. ...++|++.+.+. |++++++..++ .+.+
T Consensus 137 ~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~ 211 (287)
T 3pef_A 137 AAG---DRNLYDEAMPGFEKMGKKIIHLGD-VGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAM 211 (287)
T ss_dssp EEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTT
T ss_pred EeC---CHHHHHHHHHHHHHhCCCeEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 655 789999999999999999999976 44 2334432 3367899988876 89999999998 5443
No 106
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.67 E-value=5.8e-17 Score=156.13 Aligned_cols=157 Identities=8% Similarity=0.008 Sum_probs=125.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
.+||+|||+|+||++||..|.++|++|++||+. +.+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~~ 43 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIRD 43 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGGG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhcc
Confidence 468999999999999999999999999999973 11467
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeeEecCCCCCHH
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveiv~~~~t~~e 467 (589)
|| |+|||.+ ...+++.++.++++++++|++.+++.+.+.+........+|++.||..... .-+..+ +++
T Consensus 44 aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~~----~~i~a~---d~~ 112 (232)
T 3dfu_A 44 FE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQDR----WVASAL---DEL 112 (232)
T ss_dssp CS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETTE----EEEEES---SHH
T ss_pred CC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCCc----eeeeCC---CHH
Confidence 88 9999976 467888999999999999988766666554544445567899999874321 113333 788
Q ss_pred HHHHHHHHHHHcCCeeEEE--cCCCCc----ccccccHHHHHHHHHHH---HcCC-CHHH
Q 007805 468 VILDLMTVGKIIKKVPVVV--GNCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFR 517 (589)
Q Consensus 468 ~~~~~~~l~~~lG~~~v~v--~d~~Gf----i~nRi~~~~~~Ea~~l~---~~Gv-~~~~ 517 (589)
.++.++++++.+|++++.+ .+.++| ..++.+.++.++|.+++ ++|+ +++|
T Consensus 113 a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d 172 (232)
T 3dfu_A 113 GETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSD 172 (232)
T ss_dssp HHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhh
Confidence 9999999999999999999 446666 45777888999999999 8898 8898
No 107
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.67 E-value=1.5e-16 Score=163.01 Aligned_cols=190 Identities=14% Similarity=0.120 Sum_probs=133.9
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.++||+|||+|.||.+||..|+++|++|++||+++++++...+ .| +..++++ +.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g-------------~~~~~~~~e~~ 85 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------LG-------------ATIHEQARAAA 85 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CEEESSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CC-------------CEeeCCHHHHH
Confidence 4578999999999999999999999999999999998776421 12 3455666 668
Q ss_pred CCCCEEEEeccCChHHHHHHHH--HHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeee
Q 007805 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lve 457 (589)
++||+||+|+|++..++. ++. ++.+.++++++|++.+++.+.. .+...+. ...+|+....+.++ ..+++..
T Consensus 86 ~~aDvVi~~vp~~~~~~~-v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i 164 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQD-VLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVI 164 (320)
T ss_dssp TTCSEEEECCSSHHHHHH-HHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEE
T ss_pred hcCCEEEEECCCHHHHHH-HHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeE
Confidence 999999999997665544 444 6777888888887665543332 2333322 22344443211111 1234555
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------ccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 007805 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~g 526 (589)
++.+ ++++++.++++++.+ +.++++++ +| ++.|-+. ...++|++.+.+. |++++++..++ .+.+
T Consensus 165 ~~gg---~~~~~~~~~~ll~~~-~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 239 (320)
T 4dll_A 165 MAGG---KPADFERSLPLLKVF-GRATHVGP-HGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFA 239 (320)
T ss_dssp EEES---CHHHHHHHHHHHHHH-EEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTT
T ss_pred EeCC---CHHHHHHHHHHHHhc-CCEEEeCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccc
Confidence 6665 789999999999999 89998876 44 3335443 3457899988876 89999999998 5543
No 108
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.64 E-value=1.1e-15 Score=154.26 Aligned_cols=188 Identities=13% Similarity=0.042 Sum_probs=135.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
|+||+|||+ |.||+++|..|+++|++|++||+++++++.+.+ .| +..++..+.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-----------MG-------------IPLTDGDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-----------TT-------------CCCCCSSGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------cC-------------CCcCCHHHHhc
Confidence 579999999 999999999999999999999999988766421 12 12233336788
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCC--------CCCe---
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL--- 455 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~--------~~~l--- 455 (589)
+||+||+|+|++ ...+++.++.+.++++++|++.+++.+.+.+.+ .....++++.||+.|.. ....
T Consensus 67 ~aDvVi~av~~~--~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~ 143 (286)
T 3c24_A 67 EADVVVLALPDN--IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHG 143 (286)
T ss_dssp TCSEEEECSCHH--HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSS
T ss_pred CCCEEEEcCCch--HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCccc
Confidence 999999999944 468889999999999999998777776666654 33345899999988765 2222
Q ss_pred -----eeEecCCCCCHHHHHHHHHHHHHcCC---eeEEEcC-CCCcc----cccccHHHH---HHHHHH-HHc-CCCHHH
Q 007805 456 -----LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGN-CTGFA----VNRAFFPYS---QSARLL-VSL-GVDVFR 517 (589)
Q Consensus 456 -----veiv~~~~t~~e~~~~~~~l~~~lG~---~~v~v~d-~~Gfi----~nRi~~~~~---~Ea~~l-~~~-Gv~~~~ 517 (589)
..++....++++.++.+.++++.+|+ +++++++ ..+.+ .|-...+++ .|++.. ... |+++++
T Consensus 144 ~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~ 223 (286)
T 3c24_A 144 GIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQA 223 (286)
T ss_dssp SSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 23333334688999999999999999 8888853 22222 344444433 355533 333 998887
Q ss_pred HHHHH
Q 007805 518 IDSAI 522 (589)
Q Consensus 518 iD~~~ 522 (589)
+-.++
T Consensus 224 ~~~~~ 228 (286)
T 3c24_A 224 ALDFM 228 (286)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76655
No 109
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.63 E-value=1.1e-15 Score=156.68 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=136.7
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCC----CeEEEEeCChH--HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G----~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
.++||+|||+|.||++||..|+++| ++|++||++++ +++... +.| +..++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~-----------~~G-------------~~~~~ 76 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR-----------KMG-------------VKLTP 76 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH-----------HHT-------------CEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH-----------HcC-------------CEEeC
Confidence 3458999999999999999999999 89999999986 555431 111 33444
Q ss_pred Cc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCC---CCcEEEecCCCCCCCCCee
Q 007805 381 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLL 456 (589)
Q Consensus 381 ~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~---~~r~ig~h~~~p~~~~~lv 456 (589)
+. +.+++||+||+||| +....+++.++.+.++++++|++.+++++...+.+.+.. ..++++.||..|.......
T Consensus 77 ~~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~ 154 (322)
T 2izz_A 77 HNKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGA 154 (322)
T ss_dssp CHHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEE
T ss_pred ChHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCe
Confidence 44 66789999999998 566788899999999999999998888888777665542 3579999998888766655
Q ss_pred eEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC----Cc--ccccccHHHHHHHHH--HHHcCCCHHHHHHHH
Q 007805 457 EIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCT----GF--AVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (589)
Q Consensus 457 eiv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~----Gf--i~nRi~~~~~~Ea~~--l~~~Gv~~~~iD~~~ 522 (589)
.++ .++.++++..+.+.++++.+|..+++..+.- +. ..+-+++ .+.|++. ....|+++++.-.++
T Consensus 155 ~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~a~~g~gpa~~~-~~~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 155 TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAF-TALDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHHHHTTTHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 544 6777789999999999999998765433210 00 1122222 3345543 345699887765554
No 110
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.62 E-value=9.7e-16 Score=157.25 Aligned_cols=160 Identities=14% Similarity=0.146 Sum_probs=119.8
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.++||+|||+|+||++||..|.++|++|++||++++.++.+.+ .| +..++++ +.+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~G-------------~~~~~~~~e~~ 62 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-----------EG-------------FDVSADLEATL 62 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-----------TT-------------CCEESCHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeeeCCHHHHH
Confidence 4678999999999999999999999999999999998776522 22 1223444 333
Q ss_pred ----CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--CHHHHhcccCCCCcEEEecCCCCCC--------
Q 007805 386 ----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQDRIIGAHFFSPAH-------- 451 (589)
Q Consensus 386 ----~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~~~~r~ig~h~~~p~~-------- 451 (589)
++||+||+||| +....++++++.++ +++++|++.+|.. .++.+..... ..+|++.||...+.
T Consensus 63 ~~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~ 138 (341)
T 3ktd_A 63 QRAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASM 138 (341)
T ss_dssp HHHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCC
T ss_pred HhcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhh
Confidence 35799999999 66778899999887 8888887665542 2344544443 46899999987653
Q ss_pred ----CCCeeeEecCCCCCHH--------HHHHHHHHHHHcCCeeEEEc-CCCCccc
Q 007805 452 ----VMPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVG-NCTGFAV 494 (589)
Q Consensus 452 ----~~~lveiv~~~~t~~e--------~~~~~~~l~~~lG~~~v~v~-d~~Gfi~ 494 (589)
.+..+.+++++.++++ .++.+.++++.+|++++++. +....++
T Consensus 139 ~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~ 194 (341)
T 3ktd_A 139 DGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAA 194 (341)
T ss_dssp SSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHH
T ss_pred hHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHH
Confidence 1234668888888888 99999999999999999883 3333333
No 111
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.59 E-value=1.5e-15 Score=163.37 Aligned_cols=204 Identities=13% Similarity=0.081 Sum_probs=142.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHH--HhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN--ALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~i~~~~~~-~~~ 385 (589)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.... ..+.| + .+.... ..+++.+++++ +++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~----i~e~g-l-~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVP----IHEPG-L-KEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCS----SCCTT-H-HHHHHHHHHTTCEEEECCHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCC----cCCCC-H-HHHHHHhcccCCEEEECCHHHHh
Confidence 679999999999999999999999999999999988875331000 00000 0 000110 12457888888 578
Q ss_pred CCCCEEEEeccC--------ChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhcccC----CC---CcEEEecCC
Q 007805 386 KDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQ---DRIIGAHFF 447 (589)
Q Consensus 386 ~~aDlVIeavpe--------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~----~~---~r~ig~h~~ 447 (589)
++||+||+|||+ |+....+++++|.++++++++|++ .|++++. .+...+. .+ ..+ .+.+
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~~--~v~~ 159 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQMF--SVVS 159 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCCE--EEEE
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCccE--EEEE
Confidence 999999999998 457888999999999999998864 4566542 2222111 11 222 2456
Q ss_pred CCCCCCCee---------eEecCCCCCH----HHHHHHHHHHHHcCC--eeEEEcC-----CCCccccccc---HHHHHH
Q 007805 448 SPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FPYSQS 504 (589)
Q Consensus 448 ~p~~~~~lv---------eiv~~~~t~~----e~~~~~~~l~~~lG~--~~v~v~d-----~~Gfi~nRi~---~~~~~E 504 (589)
+|....+.. .++.|.. ++ +..+.+.++++.+++ .++++.+ ..+++.|.++ .+++||
T Consensus 160 ~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE 238 (478)
T 2y0c_A 160 NPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNE 238 (478)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666554444 3554443 34 788999999998875 5777654 4467788876 678899
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 007805 505 ARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 505 a~~l~~~-Gv~~~~iD~~~ 522 (589)
+..+.+. |++++++..++
T Consensus 239 ~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 239 LANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 9998877 89999998887
No 112
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.59 E-value=7.7e-15 Score=148.22 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=120.7
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
|.++||+|||+|.||+++|..|+++ |++|++||+++++++.+. +.|... ..++++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~~-----------~~~~~~~ 61 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL-----------ERGIVD-----------EATADFK 61 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH-----------HTTSCS-----------EEESCTT
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH-----------HcCCcc-----------cccCCHH
Confidence 4467999999999999999999987 689999999998876642 122110 234455
Q ss_pred cCCCCCCEEEEeccCChHHHHHHHHHHHHh-CCCCcEEEecCCCCC--HHHHhcccCC-CCcEEEecCC------CCCC-
Q 007805 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH- 451 (589)
Q Consensus 383 ~~~~~aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~s~ts~~~--~~~~~~~~~~-~~r~ig~h~~------~p~~- 451 (589)
+.++++|+||+||| .....+++.++.++ ++++++|++.+++.. .+.+.+.++. ..++++.||+ .|..
T Consensus 62 ~~~~~aDvVilavp--~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a 139 (290)
T 3b1f_A 62 VFAALADVIILAVP--IKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAA 139 (290)
T ss_dssp TTGGGCSEEEECSC--HHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSC
T ss_pred HhhcCCCEEEEcCC--HHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHh
Confidence 56789999999999 44457888999888 889998875544322 2455555554 6789999997 4443
Q ss_pred -----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 452 -----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 452 -----~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
.+..+.++++..++++.++.+.++++.+|+.++++.+
T Consensus 140 ~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 140 NVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp CTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred hHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3455778888888999999999999999999888753
No 113
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.59 E-value=1.5e-14 Score=143.90 Aligned_cols=182 Identities=13% Similarity=0.088 Sum_probs=131.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCC-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
+||+|||+|.||+++|..|+++| ++|++||+++++++...+. .| +..+++. +.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~- 56 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH- 56 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-
Confidence 37999999999999999999999 9999999999887764221 01 3344455 667
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC-eeeEecCCCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 465 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveiv~~~~t~ 465 (589)
++|+||+|+| .....+++.++.+ + +++|++.+++++++.+.+.++...+++..+|..|..... ...++++..++
T Consensus 57 ~~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~ 131 (263)
T 1yqg_A 57 SDDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVS 131 (263)
T ss_dssp TTSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSC
T ss_pred cCCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCC
Confidence 9999999999 5556677766655 4 889999889999888887776656788886665655544 44577777789
Q ss_pred HHHHHHHHHHHHHcCCeeEEEc-CC--------CCcccccccHHHHHHHH-H-HHHcCCCHHHHHHHH
Q 007805 466 AQVILDLMTVGKIIKKVPVVVG-NC--------TGFAVNRAFFPYSQSAR-L-LVSLGVDVFRIDSAI 522 (589)
Q Consensus 466 ~e~~~~~~~l~~~lG~~~v~v~-d~--------~Gfi~nRi~~~~~~Ea~-~-l~~~Gv~~~~iD~~~ 522 (589)
++.++.+.++++.+|+.+ +++ +. .| ..+..+..++ +++ . ....|++++++...+
T Consensus 132 ~~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g-~~~~~~~~~~-~~l~e~~~~~G~~~~~~~~~~ 196 (263)
T 1yqg_A 132 ETDRRIADRIMKSVGLTV-WLDDEEKMHGITGISG-SGPAYVFYLL-DALQNAAIRQGFDMAEARALS 196 (263)
T ss_dssp HHHHHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTT-SHHHHHHHHH-HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEE-EeCChhhccHHHHHHc-cHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999876 665 31 11 1112222222 222 1 445699888877766
No 114
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.58 E-value=2.7e-15 Score=152.73 Aligned_cols=189 Identities=10% Similarity=0.034 Sum_probs=131.6
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.++||+|||+|.||.+||..|+++|++|++||+++++++.+.+ .| +...+++ +.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~~~e~~ 63 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-----------AG-------------AHLCESVKAAL 63 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-----------HT-------------CEECSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHH
Confidence 4578999999999999999999999999999999998776422 12 2344555 667
Q ss_pred CCCCEEEEeccCChHHHHHHHH--HHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC-C--CCCeee
Q 007805 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA-H--VMPLLE 457 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~-~--~~~lve 457 (589)
++||+||+|+|++..++. ++. .+... .++++|++.++..+.. .+...+. ...+|+..+.+.++ . ...++.
T Consensus 64 ~~aDvVi~~vp~~~~~~~-v~~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i 141 (306)
T 3l6d_A 64 SASPATIFVLLDNHATHE-VLGMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHS 141 (306)
T ss_dssp HHSSEEEECCSSHHHHHH-HHTSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEE
T ss_pred hcCCEEEEEeCCHHHHHH-Hhcccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEE
Confidence 899999999997655544 444 56554 5777776555443322 3333332 33456665332211 1 113444
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEE--cC--CCCccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 007805 458 IVRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 524 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v--~d--~~Gfi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~ 524 (589)
++.+ ++++++.++++++.+|++++++ ++ ..|...+-++ ...++|++.+.++ |++++++..++ .+
T Consensus 142 ~~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 142 IHTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp EEEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 5555 7999999999999998899999 75 5567777222 3456799988876 89999998888 44
No 115
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.58 E-value=1.7e-14 Score=147.50 Aligned_cols=193 Identities=12% Similarity=0.052 Sum_probs=129.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc-CCccCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~ 385 (589)
++||+|||+|.||.+||..|+++| ++|++||++++..+++.+..+ ...+.| + .+ +..+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~----~~~~~g-------------~-~~~s~~e~~ 85 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRA----RAAELG-------------V-EPLDDVAGI 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHH----HHHHTT-------------C-EEESSGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHH----HHHHCC-------------C-CCCCHHHHH
Confidence 468999999999999999999999 999999999842221111111 111222 2 23 333778
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCC--CCCCCeeeEec
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP--AHVMPLLEIVR 460 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p--~~~~~lveiv~ 460 (589)
++||+||+|||++... +.+.++.+.++++++|++.++..+.+ .+.+.+. ...+|+....+.| .....+..++.
T Consensus 86 ~~aDvVi~avp~~~~~--~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vg 163 (317)
T 4ezb_A 86 ACADVVLSLVVGAATK--AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVA 163 (317)
T ss_dssp GGCSEEEECCCGGGHH--HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEE
T ss_pred hcCCEEEEecCCHHHH--HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEe
Confidence 9999999999976654 45588999999999888766443322 3333332 2334554332322 23445666777
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc------ccccc---cHHHHHHHHHHHHc-CCCHHHHHHHHHhc
Q 007805 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF------AVNRA---FFPYSQSARLLVSL-GVDVFRIDSAIRSF 525 (589)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gf------i~nRi---~~~~~~Ea~~l~~~-Gv~~~~iD~~~~~~ 525 (589)
++. + +.++++++.+|+.++++++.+|- +.|-+ ....++|++.+.+. |++++.++.+..+.
T Consensus 164 g~~---~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 164 GRR---A--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp STT---H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred CCh---H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 743 2 78999999999999999876662 33333 35667899998876 89987777666443
No 116
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.57 E-value=1.9e-15 Score=154.71 Aligned_cols=186 Identities=16% Similarity=0.145 Sum_probs=134.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
+++|+|||+|.||..+|..|++.|++|++||+++++++...+ .| +...++. +.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 85 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-----------EG-------------ARLGRTPAEVVS 85 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-----------TT-------------CEECSCHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEEcCCHHHHHh
Confidence 578999999999999999999999999999999987765321 12 2233444 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHH---HHHhCCCCcEEEecCCCCC--HHHHhcccC-CCCcEEEecCCCCC---CCCCeee
Q 007805 387 DVDMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~---l~~~~~~~~ii~s~ts~~~--~~~~~~~~~-~~~r~ig~h~~~p~---~~~~lve 457 (589)
++|+||+|+|+...++. ++.+ +.+.++++++|++.+++.+ ...+.+.+. .+.++++.++++.+ ..+.++.
T Consensus 86 ~~DvVi~av~~~~~~~~-v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~ 164 (316)
T 2uyy_A 86 TCDITFACVSDPKAAKD-LVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 164 (316)
T ss_dssp HCSEEEECCSSHHHHHH-HHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEE
T ss_pred cCCEEEEeCCCHHHHHH-HHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEE
Confidence 89999999996665544 4443 3367788888876554332 344555442 45678887765432 2345566
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC------cccccc---cHHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G------fi~nRi---~~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
++++ +++.++.+.++++.+|+.++++++ +| ++.|.+ +..+++|++.+.++ |+++++++.++
T Consensus 165 ~~~g---~~~~~~~v~~ll~~~g~~~~~~~~-~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 165 LAAG---DRGLYEDCSSCFQAMGKTSFFLGE-VGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EeCC---CHHHHHHHHHHHHHhcCCEEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 6666 688999999999999999988866 33 455666 45677899988765 89999999888
No 117
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.55 E-value=1.4e-14 Score=145.36 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=125.7
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHH
Q 007805 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (589)
Q Consensus 15 v~~i~l~~p-~~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (589)
|+++..+.. ..|+++..+.+.+.++++.+.++ .+++|+|+++| |+|+++.... + .....++ ..
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~--------l-~~~~~i~-~a 183 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS--------L-MQMAKTS-AA 183 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH--------H-HHHHHHH-HH
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH--------H-HHHHHHH-HH
Confidence 444444444 35999999999999999999988 89999999876 8888654210 1 1112333 33
Q ss_pred H---HhCCCcEEEEeCCcccchh-hHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCC
Q 007805 94 I---EDCKKPIVAAVEGLALGGG-LELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169 (589)
Q Consensus 94 l---~~~~kp~iaav~G~a~GgG-~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~ 169 (589)
+ ...++|+|++|+|.|.||| +.++++||++||.++|+|++. +...+++.+|.. ++++..
T Consensus 184 l~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~ 246 (304)
T 2f9y_B 184 LAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQ 246 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTT
T ss_pred HHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccC
Confidence 4 4559999999999999999 778999999999999999987 456677777753 578999
Q ss_pred CHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcC
Q 007805 170 TSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (589)
Q Consensus 170 ~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (589)
+|++++++|+||.|++++++.+.+.+++..++..+
T Consensus 247 ~Ae~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 247 RSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp BHHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999998754
No 118
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.55 E-value=3.5e-15 Score=160.22 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=101.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCC---cHHHHH
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLL 535 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv--~~~~iD~~~-~~~g~p~---Gpf~~~ 535 (589)
..+++++.+.+.++.+.+|+.++.+ .+|+|+||++.+++|||++++++|| +++|||.++ .|+|||+ |||+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~ 407 (463)
T 1zcj_A 330 HKPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYA 407 (463)
T ss_dssp EEECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHH
Confidence 3478999998888888888766543 3799999999999999999999998 599999999 9999998 999999
Q ss_pred HHhchHHHHHHHHHHHHhCCC--CCCchHHHHHHHHcCCCCcccce
Q 007805 536 DLAGYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGRNGNKGFS 579 (589)
Q Consensus 536 D~~Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~g~~G~~Gfy 579 (589)
|.+|+|+++++++.|++.+++ ++.|+++|++|+++| +.|.
T Consensus 408 D~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G----~~~~ 449 (463)
T 1zcj_A 408 ASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG----SPPL 449 (463)
T ss_dssp HHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTT----CCCG
T ss_pred HHhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcC----CCcc
Confidence 999999999999999999998 567999999999999 6675
No 119
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.55 E-value=7.3e-14 Score=140.36 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=117.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
|++|+|||+|.||+++|..|++.|+ +|++||+++++++.+. +.|.. ...++++ +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-----------HCCCc-----------ccccCCHHHH
Confidence 4689999999999999999999999 9999999998876642 12211 0123455 66
Q ss_pred CC-CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC----------
Q 007805 385 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 451 (589)
Q Consensus 385 ~~-~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~---------- 451 (589)
++ +||+||+|+| .....+++.++.+.++++++|++.+++.. ...+.+.++. ++++.||+..+.
T Consensus 59 ~~~~aDvVilavp--~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSC--HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCC--HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 9999999999 44566888899999999988876444332 2344444432 488888865432
Q ss_pred --CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 452 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 452 --~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
.+..+.++++..++++.++.+.++++.+|.+++++.+
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3455778888888999999999999999999988864
No 120
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.55 E-value=6e-14 Score=140.80 Aligned_cols=164 Identities=17% Similarity=0.157 Sum_probs=119.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
+||+|||+|.||+++|..|.+.|++|++||+++++++.+. +.|.. ...+++++.++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~~~~ 58 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLV-----------DEAGQDLSLLQTA 58 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGGTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------hCCCC-----------ccccCCHHHhCCC
Confidence 3799999999999999999999999999999998876642 11211 0234455333899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCC------------CCCee
Q 007805 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLL 456 (589)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~------------~~~lv 456 (589)
|+||+|+| .....+++.++.+.++++++|++. ++.....+........++++.||..... ....+
T Consensus 59 D~vi~av~--~~~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~ 135 (279)
T 2f1k_A 59 KIIFLCTP--IQLILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPY 135 (279)
T ss_dssp SEEEECSC--HHHHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEE
T ss_pred CEEEEECC--HHHHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcE
Confidence 99999999 556778899999999999988775 4455433332222223899999875221 23367
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCcccccc
Q 007805 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAVNRA 497 (589)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~Gfi~nRi 497 (589)
.++++..++++..+.+.++++.+|.+++++.+ ..+.+...+
T Consensus 136 ~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~ 177 (279)
T 2f1k_A 136 VLTPTEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWI 177 (279)
T ss_dssp EEEECTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 78888888999999999999999999988854 344444444
No 121
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.53 E-value=4.9e-14 Score=139.88 Aligned_cols=184 Identities=12% Similarity=0.092 Sum_probs=131.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
++||+|||+|.||..++..|.+.|++|.+||+++++++...+.+ | +...+++ +.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------g-------------~~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------A-------------LPYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------T-------------CCBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------C-------------CEeeCCHHHHHh
Confidence 35899999999999999999999999999999998877643210 1 2334455 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC-eeeEecCCCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 465 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveiv~~~~t~ 465 (589)
++|+||+|+| .....+++.+ +.+++++++.+++++++.+.+..+...+++..||..|..... ...++++..++
T Consensus 60 ~~D~Vi~~v~--~~~~~~v~~~----l~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIK--PQLFETVLKP----LHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSC--GGGHHHHHTT----SCCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeC--cHhHHHHHHH----hccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 9999999998 3344455544 347788888888888888877776555788888887776654 45567787889
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCC-C-c-----ccccccHHHHHHHH--HHHHcCCCHHHHHHHH
Q 007805 466 AQVILDLMTVGKIIKKVPVVVGNCT-G-F-----AVNRAFFPYSQSAR--LLVSLGVDVFRIDSAI 522 (589)
Q Consensus 466 ~e~~~~~~~l~~~lG~~~v~v~d~~-G-f-----i~nRi~~~~~~Ea~--~l~~~Gv~~~~iD~~~ 522 (589)
++.++.++++++.+| .++++++.. . + -.|.+++.+. +++ .+...|++++++-.++
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~-~~la~~~~~~Gl~~~~~~~~~ 197 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFI-EALAKAGVKNGIPKAKALEIV 197 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHH-HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 566665421 0 0 0112222222 333 2456689888776665
No 122
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.53 E-value=2.1e-14 Score=137.95 Aligned_cols=140 Identities=16% Similarity=0.182 Sum_probs=110.8
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.++..+.+++.+.|..++.+++++.|+|.- .|.|+++.. ...++ +.+..+++||++.++
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~a----------------g~~I~-~~i~~~~~pV~t~v~ 111 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSA----------------GLAIV-DTMNFIKADVQTIVM 111 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHH----------------HHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHH----------------HHHHH-HHHHhcCCCEEEEEc
Confidence 488999999999999999887788888863 344544332 22455 668889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeccccccCCCCChhh------------------hhhHhhhcCH--HHHHHHHH
Q 007805 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGG------------------TQRLPRLVGL--SKAIEMML 164 (589)
Q Consensus 107 G~a~GgG~~lala~D~--~ia~~~a~~~~pe~~~Gl~p~~g~------------------~~~l~~~~G~--~~a~~l~l 164 (589)
|.|.++|+.|+++||. |+|.++++|++++.. |..|..|. ...+++..|. .++.+++.
T Consensus 112 G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~ 190 (218)
T 1y7o_A 112 GMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAE 190 (218)
T ss_dssp EEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999999999987 44443333 2457777776 48889999
Q ss_pred cCCCCCHHHHHHcCCcceecCchH
Q 007805 165 LSKSITSEEGWKLGLIDAVVTSEE 188 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~~~ 188 (589)
+|+.++|+||+++||||+|+++++
T Consensus 191 ~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 191 RDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp SCCCBCHHHHHHHTSCSEECCCC-
T ss_pred CCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999999999999999999998765
No 123
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.53 E-value=2.1e-14 Score=145.60 Aligned_cols=187 Identities=18% Similarity=0.194 Sum_probs=128.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
+||+|||+|.||..+|..|++.|++|++||+++++.+...+ .| +...+++ +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 48999999999999999999999999999999988766422 12 2334455 55788
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCcEEEecCCCCCH--HHHhcccCC-CCcEEEecCC-CCC--CCCCeeeEe
Q 007805 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF-SPA--HVMPLLEIV 459 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~-~~r~ig~h~~-~p~--~~~~lveiv 459 (589)
+|+||+|+|+...++..++ .++.+.++++++|++.+++.+. ..+.+.+.. ...++....+ +++ ....+..++
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEe
Confidence 9999999996665544443 5688889999988876665542 345554432 2234332111 111 011122333
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCccc---ccccH----HHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAV---NRAFF----PYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~Gfi~---nRi~~----~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
.+ +++.++.+.++++.+|..++++++ ..|... |+.+. ..++|++.+.++ |+++++++.++
T Consensus 142 ~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 142 GG---DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp ES---CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33 789999999999999999998854 344432 33333 567799887755 89999998887
No 124
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.53 E-value=3e-14 Score=144.61 Aligned_cols=186 Identities=17% Similarity=0.134 Sum_probs=131.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
+||+|||+|.||..+|..|++.|++|++||+++++.+...+ .| +...+++ +.+++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-----------QG-------------AQACENNQKVAAA 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-----------TT-------------CEECSSHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 58999999999999999999999999999999988765321 12 2334455 55778
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCcEEEecCCCCC--HHHHhcccCC-CCcEEEecCCCCCC----CCCeeeE
Q 007805 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLEI 458 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~-~~r~ig~h~~~p~~----~~~lvei 458 (589)
+|+||+|+|.+..++..+. .++.+.++++++|++.+++.+ ...+.+.+.. ..+++.. |..+.. ...+..+
T Consensus 61 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~~ 139 (301)
T 3cky_A 61 SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTIM 139 (301)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEEE
Confidence 9999999996665554443 378888999999988877763 3455554432 2344432 221110 0223444
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCcc----cccc---cHHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA----VNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~Gfi----~nRi---~~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
+.+ +++.++.+.++++.+|..++++++ ..|.. .|.+ +...++|++.+.+. |+++++++.++
T Consensus 140 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 140 VGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp EES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 444 789999999999999999888854 33433 4555 34567899987765 89999998887
No 125
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.52 E-value=2.6e-14 Score=152.65 Aligned_cols=205 Identities=17% Similarity=0.153 Sum_probs=135.1
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhC-CC-eEEEEeCChH----HHHHHHHHH------HHHHHhhHhcCCCCHHHHHHHhh
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTI------EANVRGLVTRGKLTQDKANNALK 374 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~~----~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~ 374 (589)
+++||+|||+|.||.++|..|+++ |+ +|++||++++ +++...+.. +..++.++++ ....+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~--------~~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK--------VVKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH--------HHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh--------hcccC
Confidence 467999999999999999999999 99 9999999999 777642210 0000111100 00135
Q ss_pred cccccCCccCCCCCCEEEEeccCCh----------HHHHHHHHHHHHhCCCCcEEEecCCCCCHHH---Hh-----cccC
Q 007805 375 MLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLNI---VG-----EKTS 436 (589)
Q Consensus 375 ~i~~~~~~~~~~~aDlVIeavpe~~----------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~---~~-----~~~~ 436 (589)
++.++++.+++++||+||+|||++. .......+.|.++++++++|+. .||+++.. +. +...
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVL-ESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEE-CSCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEE-eCCCChHHHHHHHHHHHHHhcC
Confidence 6888888888999999999998763 3345667889999999998764 34544431 21 1111
Q ss_pred C--CCcE-EEecCCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCC-----Cccccccc
Q 007805 437 S--QDRI-IGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKII-KKVPVVVGNCT-----GFAVNRAF 498 (589)
Q Consensus 437 ~--~~r~-ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~l-G~~~v~v~d~~-----Gfi~nRi~ 498 (589)
. ...| +. ++|....+.- .|+.| .+++..+.++++++.+ ++.++++.+.. .++.|-++
T Consensus 168 ~~~~~d~~v~---~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~ 242 (478)
T 3g79_A 168 LKAGEDFALA---HAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFR 242 (478)
T ss_dssp CCBTTTBEEE---ECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHH
T ss_pred CCcCCceeEE---eCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHH
Confidence 1 1111 11 2333222111 24433 3788889999999999 88888876532 23334443
Q ss_pred ---HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 007805 499 ---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (589)
Q Consensus 499 ---~~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~ 525 (589)
.+++||+..+.+. |++++++=.++ ...
T Consensus 243 a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 243 DLQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 5677999988877 99999987777 444
No 126
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.52 E-value=7.1e-14 Score=144.67 Aligned_cols=185 Identities=11% Similarity=0.064 Sum_probs=129.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
.+||+|||+|.||.+||..|+++|++|++||+++++++.+.+ .| +..++++ +.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-------------~~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------EG-------------IAGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CEEeCCHHHHHh
Confidence 478999999999999999999999999999999998776421 12 3344555 4556
Q ss_pred CC---CEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhccc-CCCCcEEEecCCCCC---CCCCeee
Q 007805 387 DV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT-SSQDRIIGAHFFSPA---HVMPLLE 457 (589)
Q Consensus 387 ~a---DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~-~~~~r~ig~h~~~p~---~~~~lve 457 (589)
++ |+||+|||.+ ...+++.++.+.++++++|++.+++.+.+ .+...+ .+..+|+....+.++ ..++ ..
T Consensus 78 ~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-~i 154 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-CL 154 (358)
T ss_dssp HSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC-EE
T ss_pred cCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC-ee
Confidence 66 9999999977 46677899999999999998877765533 233333 233345554322211 1122 22
Q ss_pred EecCCCCCHHHHHHHHHHHHHcC--------------------CeeEEEcC-CCCccc----cccc---HHHHHHHHHHH
Q 007805 458 IVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAV----NRAF---FPYSQSARLLV 509 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG--------------------~~~v~v~d-~~Gfi~----nRi~---~~~~~Ea~~l~ 509 (589)
++.+ ++++++.++++++.+| +.++++++ ..|..+ |-+. ...+.|++.++
T Consensus 155 m~GG---~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la 231 (358)
T 4e21_A 155 MIGG---EKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNIL 231 (358)
T ss_dssp EEES---CHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecC---CHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334 7899999999999999 57788865 344444 3222 33456999999
Q ss_pred Hc-------------------------CCCHHHHHHHH
Q 007805 510 SL-------------------------GVDVFRIDSAI 522 (589)
Q Consensus 510 ~~-------------------------Gv~~~~iD~~~ 522 (589)
++ |+++++|-.+|
T Consensus 232 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~ 269 (358)
T 4e21_A 232 HHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVW 269 (358)
T ss_dssp HTTTCC--------------CGGGCCCCCCHHHHHHHH
T ss_pred HhcccccccccccccccccccchhcccCCCHHHHHHHH
Confidence 87 56888888887
No 127
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.51 E-value=1.9e-13 Score=139.34 Aligned_cols=201 Identities=12% Similarity=0.116 Sum_probs=130.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc---cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY---SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~---~~ 384 (589)
++||+|||+|.||+++|..|+++|++|++||+++++++...+. |.............+..+++. +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-----------GLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-----------CEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-----------CEEEEeCCCeeEecceeecchhhccc
Confidence 4689999999999999999999999999999999887764321 100000000000112222322 23
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH-HHHhcccCCCCcEEEe-cCCCCCCCC---------
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGA-HFFSPAHVM--------- 453 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~-h~~~p~~~~--------- 453 (589)
++++|+||+|+|. ....+++.++.++++++++|++.++++.. ..+.+.++. .++++. ++...+..+
T Consensus 72 ~~~~d~vi~~v~~--~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~-~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTKA--QQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPK-ENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSCH--HHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCG-GGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEecc--ccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCC-ccEEEEEeeeeeEEcCCCEEEEecC
Confidence 4599999999994 45678889999999999999998888776 456555543 367743 333222111
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC-----cccc------------------------cccHHHHHH
Q 007805 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVN------------------------RAFFPYSQS 504 (589)
Q Consensus 454 ~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G-----fi~n------------------------Ri~~~~~~E 504 (589)
..+.+.....++++..+.+.++++.+|..+++..|..+ ++.| .++...+.|
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E 228 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISE 228 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHH
Confidence 11234444456789999999999999998887766311 1112 234556678
Q ss_pred HHHHHHc-CCCH--HHHHHHH
Q 007805 505 ARLLVSL-GVDV--FRIDSAI 522 (589)
Q Consensus 505 a~~l~~~-Gv~~--~~iD~~~ 522 (589)
++.+.+. |+++ +.+...+
T Consensus 229 ~~~la~~~G~~~~~~~~~~~~ 249 (316)
T 2ew2_A 229 FAAVAEKEAIYLDQAEVYTHI 249 (316)
T ss_dssp HHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCCChHHHHHHH
Confidence 8888764 8844 4554444
No 128
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.51 E-value=8.8e-15 Score=148.20 Aligned_cols=184 Identities=18% Similarity=0.137 Sum_probs=125.3
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCCC
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (589)
||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..++++ +.++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~~ 57 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-----------AG-------------EQVVSSPADVAEKA 57 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-----------TT-------------CEECSSHHHHHHHC
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeecCCHHHHHhcC
Confidence 7999999999999999999999999999999988766421 12 3344555 557889
Q ss_pred CEEEEeccCChHHHHHHHHH---HHHhCCCCcEEEecCCCCCHHHHhc---ccCCCCcEEEecCCCCCCCC-------Ce
Q 007805 389 DMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVM-------PL 455 (589)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~---l~~~~~~~~ii~s~ts~~~~~~~~~---~~~~~~r~ig~h~~~p~~~~-------~l 455 (589)
|+||+|+|....++ .++.+ +.+.++++++|++ ++++.+..... ..... +.+|.+.|... ..
T Consensus 58 Dvvi~~vp~~~~~~-~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~----g~~~~~~p~~~g~~~a~~~~ 131 (296)
T 2gf2_A 58 DRIITMLPTSINAI-EAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM----GAVFMDAPVSGGVGAARSGN 131 (296)
T ss_dssp SEEEECCSSHHHHH-HHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEESHHHHHHHTC
T ss_pred CEEEEeCCCHHHHH-HHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEEcCCCCChhHHhcCc
Confidence 99999998555543 44544 3446788898888 78877765432 22211 12222222111 11
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-Cc---ccccccH----HHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 007805 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT-GF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (589)
Q Consensus 456 veiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-Gf---i~nRi~~----~~~~Ea~~l~~~-Gv~~~~iD~~~-~~~ 525 (589)
..++.+ .+++.++.+.++++.+|+.++++++.. |. ++|+.+. .+++|++.+.+. |+++++++.++ .+.
T Consensus 132 ~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~ 209 (296)
T 2gf2_A 132 LTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSS 209 (296)
T ss_dssp EEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence 233333 368889999999999999998886521 21 2233432 578899987765 99999999988 433
No 129
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.50 E-value=2.7e-14 Score=138.20 Aligned_cols=154 Identities=18% Similarity=0.236 Sum_probs=113.6
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEE-EeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
+.|+||+|||+|.||.++|..|+++|++|++ ||++++++++..+.. | .....++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----------g------------~~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----------G------------ASVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----------T------------TTEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----------C------------CCcccChHHH
Confidence 4568999999999999999999999999999 999999877643211 1 1112334466
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--------------CHHHHhcccCCCCcEEEecCCCCC
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--------------DLNIVGEKTSSQDRIIGAHFFSPA 450 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--------------~~~~~~~~~~~~~r~ig~h~~~p~ 450 (589)
++++|+||+|+| .....+++.++.+ + ++++|++.+.++ ..+.+++.++ ..+++..+++.|.
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 889999999998 6667788888776 4 577888888777 3456666665 4577777665544
Q ss_pred CCCC---------eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 451 HVMP---------LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 451 ~~~~---------lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
.... ...++.+ .++++.+.++++++.+|++++.+++
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 3222 2223333 4699999999999999999999865
No 130
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.49 E-value=1.6e-14 Score=146.08 Aligned_cols=182 Identities=17% Similarity=0.147 Sum_probs=126.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
++||+|||+|.||..+|..|++.|++|++|| ++++++...+ .| +...+++ +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLS-----------LG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH-----------cC-------------CcccCCHHHHHh
Confidence 3589999999999999999999999999999 9877665321 12 2334455 5578
Q ss_pred CCCEEEEeccCChHHHHHHHH---HHHHhCCCCcEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC--------CC
Q 007805 387 DVDMVIEAVIESVPLKQKIFS---ELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH--------VM 453 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~---~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~--------~~ 453 (589)
++|+||+|+|.+..++. ++. ++.+.++++++|++.+++.+ ...+.+.+... +.|+.+.|. ..
T Consensus 58 ~~D~vi~~vp~~~~~~~-v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g 132 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVED-VLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREG 132 (295)
T ss_dssp TCSEEEECCSSHHHHHH-HHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHT
T ss_pred cCCEEEEECCCHHHHHH-HHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcC
Confidence 99999999996655443 444 67777889998887666543 23455444321 233333222 12
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCC----cccccc---cHHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 454 ~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~G----fi~nRi---~~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
.+..++.+ +++.++.+.++++.+|..++++++ ..| ++.|.+ +...++|++.+.++ |+++++++.++
T Consensus 133 ~~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 133 TLSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CeEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33445554 789999999999999999988865 333 233443 23467899988866 89999999888
No 131
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.49 E-value=6.4e-14 Score=145.12 Aligned_cols=197 Identities=14% Similarity=0.064 Sum_probs=132.2
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.++||+|||+|.||+++|..|+++|++|++||++++.++...+...+. .+.. | +. ...++.+++|+ +++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~--~~l~-g-~~------l~~~i~~t~d~~ea~ 97 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNN--RYLP-N-YP------FPETLKAYCDLKASL 97 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBT--TTBT-T-CC------CCTTEEEESCHHHHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCc--ccCC-C-Cc------cCCCeEEECCHHHHH
Confidence 356899999999999999999999999999999999877653311000 0000 0 00 11346677787 678
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH------HHhcccCCCCcE-EEecCCCCC---CCCCe
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRI-IGAHFFSPA---HVMPL 455 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~------~~~~~~~~~~r~-ig~h~~~p~---~~~~l 455 (589)
++||+||+||| ....+++++++.++++++++|++.++++... .+.+.++. ..+ +-.-|.... ...+.
T Consensus 98 ~~aDvVilaVp--~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~vlsgP~~a~ev~~g~pt 174 (356)
T 3k96_A 98 EGVTDILIVVP--SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAVISGPSLATEVAANLPT 174 (356)
T ss_dssp TTCCEEEECCC--HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEEEESSCCHHHHHTTCCE
T ss_pred hcCCEEEECCC--HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEEEECccHHHHHHcCCCe
Confidence 99999999999 5578899999999999999999998887764 23343331 121 111121110 01111
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC----------------------cccccc---cHHHHHHHHHHHH
Q 007805 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVNRA---FFPYSQSARLLVS 510 (589)
Q Consensus 456 veiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G----------------------fi~nRi---~~~~~~Ea~~l~~ 510 (589)
..++.+ .+++..+.+++++...+.++++..|..| +-.|-. ....++|+.++.+
T Consensus 175 ~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~ 252 (356)
T 3k96_A 175 AVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVS 252 (356)
T ss_dssp EEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 112222 4788999999999999999988877544 222322 3444568888886
Q ss_pred c-CCCHHHH
Q 007805 511 L-GVDVFRI 518 (589)
Q Consensus 511 ~-Gv~~~~i 518 (589)
. |++++++
T Consensus 253 a~G~~~~t~ 261 (356)
T 3k96_A 253 VFGGKQETL 261 (356)
T ss_dssp HTTCCHHHH
T ss_pred HhCCChHhh
Confidence 5 8888764
No 132
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.49 E-value=9.5e-14 Score=140.72 Aligned_cols=139 Identities=17% Similarity=0.107 Sum_probs=106.4
Q ss_pred ccceEEEEc-CCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 307 GVRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 307 ~~~kI~IIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
.+++|+||| +|.||++||..|++.|++|++||++++. +..+.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~ 63 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESIL 63 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHh
Confidence 457899999 9999999999999999999999998652 001346
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC----CCCeeeEe
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIV 459 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~----~~~lveiv 459 (589)
++||+||+|||.+ ...+++.++.++++++++|++.+|... ++.+.... +.++++.||..++. ....+.++
T Consensus 64 ~~aDvVilavp~~--~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~ 139 (298)
T 2pv7_A 64 ANADVVIVSVPIN--LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRC 139 (298)
T ss_dssp TTCSEEEECSCGG--GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEE
T ss_pred cCCCEEEEeCCHH--HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEe
Confidence 7899999999944 478899999999999998876544322 33343333 46899999965442 33345566
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 007805 460 RTERTSAQVILDLMTVGKIIKKVPVVVG 487 (589)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 487 (589)
++. +++.++.+.++++.+|.+++++.
T Consensus 140 ~~~--~~~~~~~v~~l~~~~G~~~~~~~ 165 (298)
T 2pv7_A 140 DGR--FPERYEWLLEQIQIWGAKIYQTN 165 (298)
T ss_dssp EEE--CGGGTHHHHHHHHHTTCEEEECC
T ss_pred cCC--CHHHHHHHHHHHHHcCCEEEECC
Confidence 654 78889999999999999988875
No 133
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.48 E-value=1.3e-13 Score=136.97 Aligned_cols=180 Identities=12% Similarity=0.071 Sum_probs=124.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC----CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
.+||+|||+|.||++||..|+++| ++|++||+++++ .| +...++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~ 53 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNE 53 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHH
Confidence 358999999999999999999999 799999999764 11 2334444
Q ss_pred cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC-eeeEecC
Q 007805 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRT 461 (589)
Q Consensus 383 ~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveiv~~ 461 (589)
+.++++|+||+|+|.+ ...+++.++.+.+ ++++|++.+++++.+.+.+.++...+++...+..|..... ...++++
T Consensus 54 ~~~~~~D~vi~~v~~~--~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 130 (262)
T 2rcy_A 54 ELARHCDIIVCAVKPD--IAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSN 130 (262)
T ss_dssp HHHHHCSEEEECSCTT--THHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHhcCCEEEEEeCHH--HHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeC
Confidence 5678899999999943 4678888998888 5677888999999887777665543444433444443333 3345677
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC-CCccc------ccccHHHHHHHHH--HHHcCCCHHHHHHHH
Q 007805 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC-TGFAV------NRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (589)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~-~Gfi~------nRi~~~~~~Ea~~--l~~~Gv~~~~iD~~~ 522 (589)
+.++++.++.+.++++.+|+ ++++++. .+.+. |-.++ .+.|++. ....|+++++.-..+
T Consensus 131 ~~~~~~~~~~~~~ll~~~G~-~~~~~~~~~~~~~a~~~~~~~~~~-~~~~al~~~~~~~Gl~~~~~~~~~ 198 (262)
T 2rcy_A 131 KNVNSTDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVY-LFIESLIDAGVKNGLSRELSKNLV 198 (262)
T ss_dssp TTCCHHHHHHHHHHHHTSEE-EEECCGGGHHHHHHHTTSHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHHccHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 77899999999999999997 7777532 11111 11121 2224332 346688877655444
No 134
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.48 E-value=1.6e-13 Score=147.64 Aligned_cols=202 Identities=16% Similarity=0.187 Sum_probs=136.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCC--HHHHHHHh-----hcccc
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKANNAL-----KMLKG 378 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~-----~~i~~ 378 (589)
|+||+|||+|.||.++|..|+++ |++|++||+++++++... .|... ....+..+ ..+.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~------------~g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWN------------SPTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT------------SSSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHh------------CCCCCcCCCCHHHHHHHhhcCCEEE
Confidence 57899999999999999999998 899999999999877632 12110 00011111 24667
Q ss_pred cCCc-cCCCCCCEEEEeccCChHH-------------HHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhcccCCC-Cc
Q 007805 379 VLDY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQ-DR 440 (589)
Q Consensus 379 ~~~~-~~~~~aDlVIeavpe~~~~-------------k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~-~r 440 (589)
++++ +++++||+||+|||+.... ...+.+++.++++++++|+.. |+.++. .+...+... ..
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~-STv~~g~~~~l~~~l~~~~~~ 151 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEK-STVPVRAAESIRRIFDANTKP 151 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEEC-SCCCTTHHHHHHHHHHHTCCT
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEEC-CcCCchHHHHHHHHHHHhCCC
Confidence 7776 5788999999999865532 456778899999999887643 333332 233322211 11
Q ss_pred EEEec-CCCCCCCCCeee---------E-ecCCC--CCHHHHHHHHHHHHHc-CCeeEEEcC-----CCCccccccc---
Q 007805 441 IIGAH-FFSPAHVMPLLE---------I-VRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRAF--- 498 (589)
Q Consensus 441 ~ig~h-~~~p~~~~~lve---------i-v~~~~--t~~e~~~~~~~l~~~l-G~~~v~v~d-----~~Gfi~nRi~--- 498 (589)
.+..+ .++|....+... + +.++. +++++.+.+.++++.+ |+.++++.+ ..+++.|.+.
T Consensus 152 ~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 152 NLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp TCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 11111 244444443332 3 44433 3788999999999998 778888754 3467778864
Q ss_pred HHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 499 FPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 499 ~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
.+++||+..+.++ |+++++++.++
T Consensus 232 ia~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 232 ISSINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 5788999999877 89999999998
No 135
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.47 E-value=9.5e-14 Score=148.27 Aligned_cols=198 Identities=14% Similarity=0.103 Sum_probs=131.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHH------hhcccccCCc
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY 382 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~i~~~~~~ 382 (589)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.. -.+.....+.. .+++.+++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~----------~~i~e~~l~~~~~~~~~~g~l~~t~~~ 70 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK----------SPIVEPGLEALLQQGRQTGRLSGTTDF 70 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC----------CSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCC----------CCcCCCCHHHHHHhhcccCceEEeCCH
Confidence 3799999999999999999999999999999999887743210 00000001111 2356778887
Q ss_pred -cCCCCCCEEEEeccCChH--------HHHHHHHHHHHhCCC---CcEEEecCCCCCHH----HHhcccCC--CCc----
Q 007805 383 -SEFKDVDMVIEAVIESVP--------LKQKIFSELEKACPP---HCILATNTSTIDLN----IVGEKTSS--QDR---- 440 (589)
Q Consensus 383 -~~~~~aDlVIeavpe~~~--------~k~~v~~~l~~~~~~---~~ii~s~ts~~~~~----~~~~~~~~--~~r---- 440 (589)
+++++||+||+|||+... ...++++++.+++++ +++|+..+ +.++. .+...+.. ..+
T Consensus 71 ~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 71 KKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCc
Confidence 568999999999987553 144577889998888 88876443 33322 22222211 111
Q ss_pred -EEEecCCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----CCCccccccc---HHHH
Q 007805 441 -IIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYS 502 (589)
Q Consensus 441 -~ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-----~~Gfi~nRi~---~~~~ 502 (589)
.+. ++|....+.. .++.+. ++++..+.+.++++.+|.. +++.+ ..+++.|.+. .+++
T Consensus 150 ~~v~---~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~ae~~Kl~~N~~~a~~ia~~ 224 (436)
T 1mv8_A 150 FGVG---TNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAP-IIRKTVEVAEMIKYTCNVWHAAKVTFA 224 (436)
T ss_dssp BEEE---ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE---ECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCC-EEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 122 2343333322 244443 3688999999999999984 44443 2345667654 5788
Q ss_pred HHHHHHHHc-CCCHHHHHHHH
Q 007805 503 QSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 503 ~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
||+..+.++ |+++++++.++
T Consensus 225 nE~~~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 225 NEIGNIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHh
Confidence 999988877 89999999988
No 136
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.47 E-value=3.4e-13 Score=143.22 Aligned_cols=197 Identities=15% Similarity=0.124 Sum_probs=132.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCC--HHHHH----H--HhhcccccC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKAN----N--ALKMLKGVL 380 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~----~--~~~~i~~~~ 380 (589)
-+|+|||+|.||.++|.+|+++||+|++||+++++++...+ |... ....+ . ..+++++++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~------------g~~~~~epgl~~~~~~~~~~g~l~~tt 76 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ------------NVMPIYEPGLDALVASNVKAGRLSFTT 76 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT------------TCCSSCCTTHHHHHHHHHHTTCEEEES
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc------------CCCCccCCCHHHHHHhhcccCCEEEEC
Confidence 46999999999999999999999999999999998887532 2100 00011 1 125678889
Q ss_pred Cc-cCCCCCCEEEEeccCChH---------HHHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhccc----CCCCcEEE
Q 007805 381 DY-SEFKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKT----SSQDRIIG 443 (589)
Q Consensus 381 ~~-~~~~~aDlVIeavpe~~~---------~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~----~~~~r~ig 443 (589)
|+ +++++||+||+|||+..+ ...++++++.++++++++|++.| ++++. .+...+ ....-.+.
T Consensus 77 d~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~~d~~v~ 155 (446)
T 4a7p_A 77 DLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPNSGAKVV 155 (446)
T ss_dssp CHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTTSCCEEE
T ss_pred CHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCCCCceEE
Confidence 98 789999999999987653 46788899999999999887644 55543 222211 11111222
Q ss_pred ecCCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCe---eEEEcCCC-----Cccccccc---HHHHH
Q 007805 444 AHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCT-----GFAVNRAF---FPYSQ 503 (589)
Q Consensus 444 ~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~---~v~v~d~~-----Gfi~nRi~---~~~~~ 503 (589)
++|....+.. .++.|. .++++.+.++++++.+++. ++++.+.. +++.|-+. .+++|
T Consensus 156 ---~~Pe~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~n 231 (446)
T 4a7p_A 156 ---SNPEFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFIN 231 (446)
T ss_dssp ---ECCCCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---eCcccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221111 233332 3688999999999999875 57765532 23445443 56678
Q ss_pred HHHHHHHc-CCCHHHHHHHH
Q 007805 504 SARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 504 Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
|+..+.+. |++++++=.++
T Consensus 232 E~~~l~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 232 EIADLCEQVGADVQEVSRGI 251 (446)
T ss_dssp HHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHH
Confidence 99988876 99999988887
No 137
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.47 E-value=4.5e-13 Score=142.98 Aligned_cols=203 Identities=15% Similarity=0.118 Sum_probs=134.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHH--HhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN--ALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~i~~~~~~-~~~ 385 (589)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.... ..+.| + .+.... ..+++++++++ +++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~----i~e~g-l-~~~l~~~~~~~~l~~t~d~~ea~ 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIP----IYEPG-L-EKMIARNVKAGRLRFGTEIEQAV 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSC----CCSTT-H-HHHHHHHHHTTSEEEESCHHHHG
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCc----ccCCC-H-HHHHHhhcccCcEEEECCHHHHH
Confidence 589999999999999999999999999999999988775331000 00000 0 000000 02457788888 568
Q ss_pred CCCCEEEEeccCCh--------HHHHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhcccCC-------CCcE-EEecC
Q 007805 386 KDVDMVIEAVIESV--------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-------QDRI-IGAHF 446 (589)
Q Consensus 386 ~~aDlVIeavpe~~--------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~-------~~r~-ig~h~ 446 (589)
++||+||+|||+.. ....++++++.++++++++|++.| ++++. .+...+.. ...+ +.
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~--- 152 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIA--- 152 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEE---
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEE---
Confidence 99999999998764 267788899999999999887655 34432 22222110 0111 22
Q ss_pred CCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCC--eeEEEcCCC-----Ccccccc---cHHHHHHHHH
Q 007805 447 FSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNCT-----GFAVNRA---FFPYSQSARL 507 (589)
Q Consensus 447 ~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~--~~v~v~d~~-----Gfi~nRi---~~~~~~Ea~~ 507 (589)
++|....+.. .++.|. .++++.+.++++++.+++ .++++.+.. +++.|-+ ..+++||+..
T Consensus 153 ~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 153 SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333222211 133321 368999999999999987 366665533 3455654 3567789999
Q ss_pred HHHc-CCCHHHHHHHH
Q 007805 508 LVSL-GVDVFRIDSAI 522 (589)
Q Consensus 508 l~~~-Gv~~~~iD~~~ 522 (589)
+.+. |++++++-.++
T Consensus 232 l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 232 LCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHTCCHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHH
Confidence 8877 99999998888
No 138
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.46 E-value=1.7e-13 Score=147.52 Aligned_cols=192 Identities=14% Similarity=0.062 Sum_probs=131.9
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
+.-++|+|||+|.||++||..|+++|++|++||+++++++...+... + ..+..++++ +.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~ 72 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENP---------G-----------KKLVPYYTVKEF 72 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHST---------T-----------SCEEECSSHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCC---------C-----------CCeEEeCCHHHH
Confidence 45578999999999999999999999999999999998876533110 0 124455565 44
Q ss_pred CCC---CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCe
Q 007805 385 FKD---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPL 455 (589)
Q Consensus 385 ~~~---aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~l 455 (589)
+++ +|+||+|||.... ..+++.++.+.++++++|++.+++.+.. .+.+.+. ...+++++.....+ ..++
T Consensus 73 v~~l~~aDvVil~Vp~~~~-v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~- 150 (480)
T 2zyd_A 73 VESLETPRRILLMVKAGAG-TDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP- 150 (480)
T ss_dssp HHTBCSSCEEEECSCSSSH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-
T ss_pred HhCCCCCCEEEEECCCHHH-HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-
Confidence 555 9999999996544 4467789999999999998877776542 3444332 23456654322111 1223
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcC-CCC----ccccccc---HHHHHHHHHHHHc--CCCHHHH
Q 007805 456 LEIVRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRI 518 (589)
Q Consensus 456 veiv~~~~t~~e~~~~~~~l~~~lG~~-------~v~v~d-~~G----fi~nRi~---~~~~~Ea~~l~~~--Gv~~~~i 518 (589)
. ++.+. +++.++.++++++.+|.+ ++++++ ..| ++.|.+. ...+.|++.+.+. |++++++
T Consensus 151 ~-i~~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~ 227 (480)
T 2zyd_A 151 S-IMPGG--QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEEL 227 (480)
T ss_dssp E-EEEES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred e-EEecC--CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 2 44432 689999999999999987 566654 222 2346653 4566799998876 9999988
Q ss_pred HHHH
Q 007805 519 DSAI 522 (589)
Q Consensus 519 D~~~ 522 (589)
..++
T Consensus 228 ~~l~ 231 (480)
T 2zyd_A 228 AQTF 231 (480)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 139
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.45 E-value=9.2e-14 Score=149.94 Aligned_cols=190 Identities=13% Similarity=0.074 Sum_probs=131.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
.+|+|||+|.||++||..|+++|++|++||+++++++...+.. .. + ..+..++++ +.+++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~-------~~-~-----------~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANE-------AK-G-----------KSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTT-------TT-T-----------SSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccc-------cc-C-----------CCeEEeCCHHHHHhc
Confidence 5799999999999999999999999999999999887653200 00 0 124455565 44444
Q ss_pred ---CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccC-CCCcEEEecCCCCCC---CCCeeeE
Q 007805 388 ---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (589)
Q Consensus 388 ---aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~p~~---~~~lvei 458 (589)
+|+||+|||....+ .+++.++.+.++++++|++.+++.+. ..+.+.+. ...+|+++.....+. ..+ .+
T Consensus 72 l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~--~i 148 (497)
T 2p4q_A 72 LKRPRKVMLLVKAGAPV-DALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP--SL 148 (497)
T ss_dssp SCSSCEEEECCCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred CCCCCEEEEEcCChHHH-HHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC--eE
Confidence 99999999976554 45668899999999999877766553 23444332 233566543222221 112 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCe------eEEEc-CCCCc----cccccc---HHHHHHHHHHHHc--CCCHHHHHHHH
Q 007805 459 VRTERTSAQVILDLMTVGKIIKKV------PVVVG-NCTGF----AVNRAF---FPYSQSARLLVSL--GVDVFRIDSAI 522 (589)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~------~v~v~-d~~Gf----i~nRi~---~~~~~Ea~~l~~~--Gv~~~~iD~~~ 522 (589)
+.+. ++++++.++++++.+|++ +++++ ...|. +.|.+. ...++|++.+++. |++++++..++
T Consensus 149 m~gg--~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 149 MPGG--SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp EEEE--CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 4332 688999999999999998 66664 33443 357665 5667899998876 89999988776
No 140
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.45 E-value=2.2e-13 Score=145.74 Aligned_cols=192 Identities=13% Similarity=0.036 Sum_probs=130.3
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC-
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE- 384 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~- 384 (589)
.+++|+|||+|.||.+||..|+++|++|++||+++++++...+ .+... ..+..++++ +.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~g--------~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-----------NEAKG--------TKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-----------TTTTT--------SSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----------cccCC--------CceeccCCHHHHH
Confidence 4578999999999999999999999999999999998877532 11100 123334454 33
Q ss_pred --CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCee
Q 007805 385 --FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (589)
Q Consensus 385 --~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lv 456 (589)
++++|+||+|||....+ .+++.++.++++++.+|++.+++.+.+ .+...+. ...+|++......+ ..++ .
T Consensus 64 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~ 141 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAV-DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-S 141 (484)
T ss_dssp HTBCSSCEEEECSCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-E
T ss_pred hhccCCCEEEEecCChHHH-HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-e
Confidence 34699999999976544 456789999999999998877766533 2222222 23456654221111 1122 2
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCee-------EEEcCC-CC----ccccccc---HHHHHHHHHHHHc--CCCHHHHH
Q 007805 457 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGNC-TG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (589)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~-------v~v~d~-~G----fi~nRi~---~~~~~Ea~~l~~~--Gv~~~~iD 519 (589)
.++.+ ++++++.++++++.+|.++ +++++. .| .+-|-+. ...++|++.+++. |++++++-
T Consensus 142 im~GG---~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~ 218 (484)
T 4gwg_A 142 LMPGG---NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMA 218 (484)
T ss_dssp EEEEE---CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eecCC---CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 23344 6889999999999999887 666542 22 2335443 3456799999986 88999887
Q ss_pred HHH
Q 007805 520 SAI 522 (589)
Q Consensus 520 ~~~ 522 (589)
.++
T Consensus 219 ~v~ 221 (484)
T 4gwg_A 219 QAF 221 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 141
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.44 E-value=3.4e-13 Score=142.14 Aligned_cols=195 Identities=15% Similarity=0.118 Sum_probs=128.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCC--HHHHH----H--Hhhccccc
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKAN----N--ALKMLKGV 379 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~----~--~~~~i~~~ 379 (589)
=.|..|||+|.||.++|.+|+++||+|++||+++++++...+ |... +...+ . ..+++.++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~------------g~~pi~epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN------------GQISIEEPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT------------TCCSSCCTTHHHHHHHHHHTTCEEEE
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC------------CCCCcCCCCHHHHHHhhcccCceEEe
Confidence 368999999999999999999999999999999999887532 2110 00011 1 12456777
Q ss_pred CCccCCCCCCEEEEeccCChH----------HHHHHHHHHHHhCCCCcEEEecCCCCCHHH---Hhccc-C-CC----Cc
Q 007805 380 LDYSEFKDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKT-S-SQ----DR 440 (589)
Q Consensus 380 ~~~~~~~~aDlVIeavpe~~~----------~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~---~~~~~-~-~~----~r 440 (589)
++ +++||+||.|||.... ......+.+.++++++++|+. .||+++.. +...+ . .. ..
T Consensus 79 td---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~~g~~~~~d 154 (431)
T 3ojo_A 79 TT---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIENLGFTIGED 154 (431)
T ss_dssp SS---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHTTTCCBTTT
T ss_pred Cc---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHHcCCCcCCC
Confidence 76 4589999999997652 345566789999999998764 44555432 22111 1 11 11
Q ss_pred EEEecCCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-C----Cccccccc---HHHHH
Q 007805 441 IIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-T----GFAVNRAF---FPYSQ 503 (589)
Q Consensus 441 ~ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~-~----Gfi~nRi~---~~~~~ 503 (589)
|.- -++|.+..+.- .++.|. ++++.+.++++++.+++.++++.+. . .++.|-++ .+++|
T Consensus 155 ~~v--~~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~n 230 (431)
T 3ojo_A 155 IYL--VHCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALAN 230 (431)
T ss_dssp EEE--EECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEE--EECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 13332222111 245442 6899999999999999888777542 1 13334443 46779
Q ss_pred HHHHHHHc-CCCHHHHHHHH
Q 007805 504 SARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 504 Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
|+..+.+. |++++++=.++
T Consensus 231 E~~~l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 231 ELTKICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHH
Confidence 99988877 99999988877
No 142
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.44 E-value=1.6e-13 Score=138.39 Aligned_cols=184 Identities=15% Similarity=0.061 Sum_probs=124.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
|+||+|||+|.||..+|..|++ |++|++||+++++.+...+. | +...+..+.+++
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~ 55 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-----------F-------------GSEAVPLERVAE 55 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-----------H-------------CCEECCGGGGGG
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-----------C-------------CcccCHHHHHhC
Confidence 3589999999999999999999 99999999999887764221 1 112222256789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCC-CCcEEEecCCCC-CC---CCCeeeEec
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSP-AH---VMPLLEIVR 460 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~-~~r~ig~h~~~p-~~---~~~lveiv~ 460 (589)
+|+||+|+|.+..+ ..++.++.+.++++++|++.++..+ ...+.+.+.. ..+++.. |..+ +. ...+..++.
T Consensus 56 ~D~vi~~v~~~~~~-~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~ 133 (289)
T 2cvz_A 56 ARVIFTCLPTTREV-YEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG 133 (289)
T ss_dssp CSEEEECCSSHHHH-HHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE
T ss_pred CCEEEEeCCChHHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC
Confidence 99999999965444 3466888888889998885443322 3345554433 2245443 3211 10 122233443
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-Cc----ccccc---cHHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCT-GF----AVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-Gf----i~nRi---~~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
+ +++.++.+.+++ .+|+.++++++.. +. +.|.+ +...++|++.+.++ |+++++++.++
T Consensus 134 ~---~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 134 G---PEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp S---CHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred C---CHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 3 789999999999 9999888886642 22 23553 34567799888765 89999998888
No 143
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.44 E-value=1.4e-13 Score=141.81 Aligned_cols=235 Identities=15% Similarity=0.080 Sum_probs=148.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHH-HHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.++|+|||+|.||+++|..|...|++|+++|++++. .+.+. +.| +..+ ++ +.+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~-----------~~G-------------~~~~-~~~e~~ 70 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-----------AHG-------------LKVA-DVKTAV 70 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-----------HTT-------------CEEE-CHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH-----------HCC-------------CEEc-cHHHHH
Confidence 468999999999999999999999999999999765 33321 112 2223 44 567
Q ss_pred CCCCEEEEeccCChHHHHHHHH-HHHHhCCCCcEEEecCCCCCHHHHhccc-CCCCcEEEecCCCCCCC---------CC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MP 454 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~-~l~~~~~~~~ii~s~ts~~~~~~~~~~~-~~~~r~ig~h~~~p~~~---------~~ 454 (589)
++||+||+|+| ......++. ++.++++++++|++. +++.. .+.... +....+++.||+.|.+. +.
T Consensus 71 ~~aDvVilavp--~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~ 146 (338)
T 1np3_A 71 AAADVVMILTP--DEFQGRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGI 146 (338)
T ss_dssp HTCSEEEECSC--HHHHHHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCC
T ss_pred hcCCEEEEeCC--cHHHHHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCC
Confidence 89999999999 444578888 899999999998876 44444 333322 22235999999777541 23
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCC-e--eEEEc----C-CCCcccccccH----HHHHHHH-HHHHcCCCHHHH---
Q 007805 455 LLEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAFF----PYSQSAR-LLVSLGVDVFRI--- 518 (589)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~-~--~v~v~----d-~~Gfi~nRi~~----~~~~Ea~-~l~~~Gv~~~~i--- 518 (589)
.+-++++..++++..+.+..+++.+|. . ++.+. + ...++.++.+. +++..++ .+++.|+++++.
T Consensus 147 ~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e 226 (338)
T 1np3_A 147 PDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFE 226 (338)
T ss_dssp CEEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 344677777888999999999999998 4 55552 1 23444343332 2333333 345779987654
Q ss_pred ----HHHH--H--hcCC------CCcHHHHHHHhch-----HHHHHHHHHHHHhCCCCCCchHHHHHHHHcCCCCc
Q 007805 519 ----DSAI--R--SFGL------PIGPFQLLDLAGY-----GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGN 575 (589)
Q Consensus 519 ----D~~~--~--~~g~------p~Gpf~~~D~~Gl-----d~~~~~~~~l~~~~~~~~~~~~~l~~~v~~g~~G~ 575 (589)
...+ . .-|| -..|-.|.|.+-- +.+...++.+.+.+.+ ...+++++++++.|+
T Consensus 227 ~~~~~~~~~~~~~~gg~~~~r~a~s~p~~~~d~~~~~~~~~~~~~~~l~~~~~~i~~----~~~~~~~~~~~~~~r 298 (338)
T 1np3_A 227 CLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVINAESRAAMRNALKRIQD----GEYAKMFITEGAANY 298 (338)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHT----THHHHHHHHHHHTTS
T ss_pred hhhHHHHHHHHHHhcCHHHHHHhcCCHHHHhhhhcCCccccHHHHHHHHHHHHHHhC----CHHHHHHHHHHhccc
Confidence 1221 1 1121 1267777775432 3444445555444332 244556665555555
No 144
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.44 E-value=6.2e-13 Score=139.96 Aligned_cols=197 Identities=17% Similarity=0.205 Sum_probs=129.6
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHh----hcccccCC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL----KMLKGVLD 381 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~i~~~~~ 381 (589)
..++||+|||+|.||.++|..|++ |++|++||+++++++...+.. ..+.+...+..+ .++++++|
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~----------~~i~e~~l~~ll~~~~~~l~~ttd 102 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI----------SPIVDKEIQEYLAEKPLNFRATTD 102 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESC
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC----------CccccccHHHHHhhccCCeEEEcC
Confidence 346799999999999999999998 999999999999988753310 011111122111 35788888
Q ss_pred c-cCCCCCCEEEEeccCCh---------HHHHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhcccCCCCcEEEecCCC
Q 007805 382 Y-SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFS 448 (589)
Q Consensus 382 ~-~~~~~aDlVIeavpe~~---------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~~r~ig~h~~~ 448 (589)
+ +++++||+||+|||++. .....+.+.+.+ ++++++|+. .|++++. ++...+.. ..+. ++
T Consensus 103 ~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~~v~---~s 175 (432)
T 3pid_A 103 KHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--DNVI---FS 175 (432)
T ss_dssp HHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--CCEE---EC
T ss_pred HHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--ccEe---ec
Confidence 7 78999999999999864 345677788888 889988864 4455543 34433332 2222 25
Q ss_pred CCCCCCee---------eEecCCCCCHHHHHHHHHHHHH--cCC-eeEEEcCC-----CCccccccc---HHHHHHHHHH
Q 007805 449 PAHVMPLL---------EIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGNC-----TGFAVNRAF---FPYSQSARLL 508 (589)
Q Consensus 449 p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~--lG~-~~v~v~d~-----~Gfi~nRi~---~~~~~Ea~~l 508 (589)
|....+.- .++.|. +++..+.+.+++.. ++. .++++.+. ..++.|-++ .+++||+..+
T Consensus 176 Pe~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~l 253 (432)
T 3pid_A 176 PEFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSY 253 (432)
T ss_dssp CCCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433221 234332 45677888999886 553 34555431 123445443 5677999988
Q ss_pred HHc-CCCHHHHHHHH
Q 007805 509 VSL-GVDVFRIDSAI 522 (589)
Q Consensus 509 ~~~-Gv~~~~iD~~~ 522 (589)
.+. |++++++=.++
T Consensus 254 ae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 254 AESQGLNSKQIIEGV 268 (432)
T ss_dssp HHHTTCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 876 99999887777
No 145
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.43 E-value=3e-13 Score=145.90 Aligned_cols=201 Identities=13% Similarity=0.137 Sum_probs=134.3
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCC--HHHHHHH-----hhcc
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKANNA-----LKML 376 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~-----~~~i 376 (589)
+.++||+|||+|.||.++|..|+++ |++|++||+++++++... .+... ....+.. ..++
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~------------~g~~~i~e~gl~~~~~~~~~~~l 74 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWN------------SDKLPIYEPGLDEIVFAARGRNL 74 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT------------SSSCSSCCTTHHHHHHHHBTTTE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHH------------CCCCCcCCCCHHHHHHHhhcCCE
Confidence 3467999999999999999999998 799999999999887742 22110 0001111 1346
Q ss_pred cccCCc-cCCCCCCEEEEeccCCh-------------HHHHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhcccCC--
Q 007805 377 KGVLDY-SEFKDVDMVIEAVIESV-------------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-- 437 (589)
Q Consensus 377 ~~~~~~-~~~~~aDlVIeavpe~~-------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~-- 437 (589)
.+++++ +++++||+||+|||+.. ....+++++|.++++++++|+..| ++++. .+...+..
T Consensus 75 ~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~ 153 (481)
T 2o3j_A 75 FFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQ 153 (481)
T ss_dssp EEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHT
T ss_pred EEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhh
Confidence 777886 77899999999998643 246778889999999999887433 33332 23222211
Q ss_pred C----C-cEEEecCCCCCCCCCee---------eEecCCCCC---HHHHHHHHHHHHHcCC-eeEEEcC-----CCCccc
Q 007805 438 Q----D-RIIGAHFFSPAHVMPLL---------EIVRTERTS---AQVILDLMTVGKIIKK-VPVVVGN-----CTGFAV 494 (589)
Q Consensus 438 ~----~-r~ig~h~~~p~~~~~lv---------eiv~~~~t~---~e~~~~~~~l~~~lG~-~~v~v~d-----~~Gfi~ 494 (589)
. . -.+..+| ....+.. .++-|...+ +++.+.++++++.++. .++++.+ ...++.
T Consensus 154 ~~~~~~d~~v~~~P---e~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~ 230 (481)
T 2o3j_A 154 KNNENLKFQVLSNP---EFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVA 230 (481)
T ss_dssp C----CCEEEEECC---CCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHH
T ss_pred CcCcCCceEEEeCc---ccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHH
Confidence 1 1 1244444 2222111 243322222 3688999999999996 7777644 334566
Q ss_pred ccc---cHHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 495 NRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 495 nRi---~~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
|.+ ..+++||+..+.+. |++++++..++
T Consensus 231 N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 231 NAFLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 764 46788999998877 99999999888
No 146
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.43 E-value=5.7e-13 Score=143.52 Aligned_cols=190 Identities=13% Similarity=0.029 Sum_probs=131.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
.++|+|||+|.||.++|..|+++|++|++||+++++++...+... + ..+..++++ +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ---------D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---------T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc---------C-----------CCeEEeCCHHHHHh
Confidence 468999999999999999999999999999999998876533110 0 124445555 4444
Q ss_pred ---CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccCC-CCcEEEecCCCCC---CCCCeee
Q 007805 387 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLE 457 (589)
Q Consensus 387 ---~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~-~~r~ig~h~~~p~---~~~~lve 457 (589)
++|+||+|||....+ ..++.++.+.++++++|++.+++.+. ..+.+.+.. ..++++.....++ ..++ .
T Consensus 65 ~l~~aDvVilavp~~~~v-~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~ 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAAT-DATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP--S 141 (474)
T ss_dssp TBCSSCEEEECCCTTHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC--C
T ss_pred hccCCCEEEEEccCchHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC--e
Confidence 499999999965544 45668899999999988877766543 345444432 3355554322211 1122 1
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe--------eEEEcC-CCC----ccccccc---HHHHHHHHHHHHc--CCCHHHHH
Q 007805 458 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (589)
Q Consensus 458 iv~~~~t~~e~~~~~~~l~~~lG~~--------~v~v~d-~~G----fi~nRi~---~~~~~Ea~~l~~~--Gv~~~~iD 519 (589)
++++. +++..+.++++++.+|.+ +.++++ ..| ++.|.+. ...+.|++.+.+. |++++++.
T Consensus 142 i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 33332 789999999999999987 455544 222 3456664 4567799998875 89999988
Q ss_pred HHH
Q 007805 520 SAI 522 (589)
Q Consensus 520 ~~~ 522 (589)
.++
T Consensus 220 ~l~ 222 (474)
T 2iz1_A 220 AIF 222 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 147
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.41 E-value=1.5e-12 Score=131.93 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=102.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEe
Q 007805 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (589)
Q Consensus 26 N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav 105 (589)
++++++..+...++++.+++.. +-+|.|.-.++++. |.+..+. .........+ ..+.++++|+|++|
T Consensus 139 G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~Ga~~-g~~ae~~----------g~~~~~a~~l-~al~~~~vPvIavV 205 (327)
T 2f9i_A 139 GMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKGAYP-GKAAEER----------GQSESIATNL-IEMASLKVPVIAIV 205 (327)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-CHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCCc-chhhhhh----------hhHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999988764 44555544333222 3221110 0112233445 56889999999999
Q ss_pred CCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecC
Q 007805 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (589)
Q Consensus 106 ~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~ 185 (589)
+|.|.|||+.++++||+++|.++++|++ +.|.++++..+++..+...+.++ +.++|++|+++|+||+|+|
T Consensus 206 ~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 206 IGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp EEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred ECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEec
Confidence 9999999999999999999999999985 34555555555555555777776 7899999999999999998
Q ss_pred c
Q 007805 186 S 186 (589)
Q Consensus 186 ~ 186 (589)
.
T Consensus 276 e 276 (327)
T 2f9i_A 276 E 276 (327)
T ss_dssp C
T ss_pred C
Confidence 3
No 148
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.38 E-value=1.7e-12 Score=129.09 Aligned_cols=178 Identities=13% Similarity=0.080 Sum_probs=116.2
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
||+|||+|.||.+||..|+++|++|++||+ +++.++...+ .| +. ++. +.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~-----------~g-------------~~--~~~~~~~~ 55 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----------VG-------------VT--ETSEEDVY 55 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----------HT-------------CE--ECCHHHHH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHH-----------CC-------------Cc--CCHHHHHh
Confidence 799999999999999999999999999998 6666554311 12 12 334 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH---HHHhcccCCCCcEEEecCCCCCC---CCCeeeEec
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIVR 460 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~---~~~~~~~~~~~r~ig~h~~~p~~---~~~lveiv~ 460 (589)
+||+||+|||++...+. +.++.+.+++ +|++. |+..+ ..+.+.+.... ++..+.+.++. .... .++.
T Consensus 56 ~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~~ 128 (264)
T 1i36_A 56 SCPVVISAVTPGVALGA--ARRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIAS 128 (264)
T ss_dssp TSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEEE
T ss_pred cCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEec
Confidence 99999999996654433 3677777776 55544 44433 35566555443 66666555442 2233 3455
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCc-----cccccc----HHHHHHHHHHHHc-CCCHHHHHHHHHhcC
Q 007805 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAIRSFG 526 (589)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gf-----i~nRi~----~~~~~Ea~~l~~~-Gv~~~~iD~~~~~~g 526 (589)
++. + +.+.+ ++.+|+.++++++.+|. +.|..+ ...++|++.+.+. |++++.++.+....|
T Consensus 129 g~~---~--~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~g 198 (264)
T 1i36_A 129 GRD---A--EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVLEMLEYTEG 198 (264)
T ss_dssp STT---H--HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred CCc---H--HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence 532 2 67778 99999999988765554 223332 4566799887755 998764433334333
No 149
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.38 E-value=8.9e-13 Score=126.58 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=114.5
Q ss_pred ceEEEEc-CCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
+||+||| +|.||..++..|++.|++|+++|+++++.+...+.+.. .+.. ..+.. +++ +.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~ 63 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAE 63 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHh
Confidence 3799999 99999999999999999999999999887665432211 1110 11222 233 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--------------HHHHhcccCCCCcEEEecCCCCCC-
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPAH- 451 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--------------~~~~~~~~~~~~r~ig~h~~~p~~- 451 (589)
++|+||+|+| .....+++.++.+.++ ++++++.++++. .+++++.++. .+++..|+..+..
T Consensus 64 ~~D~Vi~~~~--~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~v~~~~~~~~~~ 139 (212)
T 1jay_A 64 ACDIAVLTIP--WEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES-EKVVSALHTIPAAR 139 (212)
T ss_dssp HCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC-SCEEECCTTCCHHH
T ss_pred cCCEEEEeCC--hhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC-CeEEEEccchHHHH
Confidence 8999999998 4445688888877774 888888888766 5677766653 6788776543321
Q ss_pred ------CCCeeeEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcC
Q 007805 452 ------VMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 488 (589)
Q Consensus 452 ------~~~lveiv~~~~t~~e~~~~~~~l~~~l-G~~~v~v~d 488 (589)
...+..+++++ +++.++.+.++++.+ |+.++++++
T Consensus 140 ~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 140 FANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 22355566664 689999999999999 999999876
No 150
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.37 E-value=2.2e-12 Score=131.12 Aligned_cols=138 Identities=14% Similarity=0.038 Sum_probs=107.1
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEe
Q 007805 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (589)
Q Consensus 26 N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav 105 (589)
++++++..+...++++.+++.. +-+|.|.-.++++. |....+. .........+ ..+..+++|+|++|
T Consensus 153 G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga~~-g~~aE~~----------g~~~~~a~~l-~al~~~~vPvIavV 219 (339)
T 2f9y_A 153 GMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGAYP-GVGAEER----------GQSEAIARNL-REMSRLGVPVVCTV 219 (339)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-SHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCcc-chHHHHH----------HHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999888664 44566644333322 2221110 0112233444 56889999999999
Q ss_pred CCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHHHHcCCcceecC
Q 007805 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (589)
Q Consensus 106 ~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A~~~Glv~~vv~ 185 (589)
+|.|.|||+.++++||+++|.++++|++ +.|.++++.++++..+...|.++ ..++|++|+++|+||+|+|
T Consensus 220 ~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ 289 (339)
T 2f9y_A 220 IGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP 289 (339)
T ss_dssp EEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred eCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEec
Confidence 9999999999999999999999999996 46778888877877788888887 6799999999999999998
Q ss_pred c
Q 007805 186 S 186 (589)
Q Consensus 186 ~ 186 (589)
.
T Consensus 290 e 290 (339)
T 2f9y_A 290 E 290 (339)
T ss_dssp C
T ss_pred C
Confidence 3
No 151
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.35 E-value=3.2e-12 Score=125.68 Aligned_cols=166 Identities=13% Similarity=0.078 Sum_probs=102.8
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHH-HHHH-HHHHHHH-HHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKG-IKTIEAN-VRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
...+||+|||+|.||.+||..|+++|++|++||+++++ +.+. .....+. +..+.+. .+.....+..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 85 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-----------HPHVHLAAFA 85 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-----------STTCEEEEHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-----------cCceeccCHH
Confidence 34578999999999999999999999999999999886 1110 0000000 0011111 1122222323
Q ss_pred cCCCCCCEEEEeccCChHHHHHHHHHH-HHhCCCCcEEEecCCCC----------------CH-HHHhcccCCCCcEEEe
Q 007805 383 SEFKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DL-NIVGEKTSSQDRIIGA 444 (589)
Q Consensus 383 ~~~~~aDlVIeavpe~~~~k~~v~~~l-~~~~~~~~ii~s~ts~~----------------~~-~~~~~~~~~~~r~ig~ 444 (589)
+++++||+||+|||.+. ..+++.++ .+.+ ++++|++.+.++ .+ +.+++.++. .+++..
T Consensus 86 e~~~~aDvVilavp~~~--~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~-~~vv~~ 161 (245)
T 3dtt_A 86 DVAAGAELVVNATEGAS--SIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE-AKVVKT 161 (245)
T ss_dssp HHHHHCSEEEECSCGGG--HHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT-SEEEEC
T ss_pred HHHhcCCEEEEccCcHH--HHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC-CeEEEe
Confidence 67789999999999554 34666777 6666 778887776322 22 345555543 466554
Q ss_pred cCCCCC---------CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCee-EEEcC
Q 007805 445 HFFSPA---------HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP-VVVGN 488 (589)
Q Consensus 445 h~~~p~---------~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~-v~v~d 488 (589)
.++.+. ...++..++.+. ++++.+.++++++.+|+.+ +++++
T Consensus 162 ~~~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 162 LNTMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp STTSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred ecccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCc
Confidence 433222 122333344443 7899999999999999864 67765
No 152
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.34 E-value=2.9e-12 Score=137.92 Aligned_cols=192 Identities=13% Similarity=0.062 Sum_probs=128.9
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC--
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK-- 386 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~-- 386 (589)
+|+|||+|.||+++|..|+++|++|++||+++++++...+.. |... . -..+..++++ +.++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~----------g~~~-~-----~~~i~~~~~~~e~v~~l 66 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN----------ASAP-F-----AGNLKAFETMEAFAASL 66 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT----------TTST-T-----GGGEEECSCHHHHHHHB
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------CCCC-C-----CCCeEEECCHHHHHhcc
Confidence 799999999999999999999999999999999887653311 1100 0 0124555666 3344
Q ss_pred -CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccC-CCCcEEEecCCCCC---CCCCeeeEe
Q 007805 387 -DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIV 459 (589)
Q Consensus 387 -~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~p~---~~~~lveiv 459 (589)
++|+||+|||....+ .++++++.+.++++++|++.+++.+. ..+.+.+. ...++++.....++ ..++ .++
T Consensus 67 ~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~i~ 143 (478)
T 1pgj_A 67 KKPRKALILVQAGAAT-DSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP--AFF 143 (478)
T ss_dssp CSSCEEEECCCCSHHH-HHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC--EEE
T ss_pred cCCCEEEEecCChHHH-HHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC--eEe
Confidence 599999999975443 45668899999999988877666543 23444443 23345554322211 1122 133
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCe-------eEEEcC-CCC----ccccccc---HHHHHHHHHHHHc-CCCHHHHHHHH
Q 007805 460 RTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~-------~v~v~d-~~G----fi~nRi~---~~~~~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
.+. +++..+.++++++.+|.. ++++++ ..| ++.|.+. ..+++|++.+.+. |++++++..++
T Consensus 144 ~gg--~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 144 PGG--TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVL 220 (478)
T ss_dssp EEE--CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ccC--CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 332 688999999999999987 555543 222 2346543 3567899988765 89999988877
No 153
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.33 E-value=2.1e-12 Score=123.83 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=101.8
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
..++|+|||+|.||+++|..|+++|++|++||++++ .++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~ 56 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATT 56 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhc
Confidence 357899999999999999999999999999998754 367
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC---------------HHHHhcccCCCCcEEE-ecCCCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPA 450 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~---------------~~~~~~~~~~~~r~ig-~h~~~p~ 450 (589)
+||+||+|+| ....++++.++.+.++ ++++++.+++++ .+.+++.++ ..+++. .|+...|
T Consensus 57 ~aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p 132 (209)
T 2raf_A 57 LGEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAA 132 (209)
T ss_dssp CCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHH
T ss_pred cCCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHh
Confidence 8999999999 5556788889888888 888888877665 344555554 357777 6654322
Q ss_pred CC--------CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 451 HV--------MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 451 ~~--------~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
.. .+...++.+ .+++..+.+.++++.+|.+++.+++
T Consensus 133 ~~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 133 TLQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred hccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 11 112223333 4688999999999999999998876
No 154
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.32 E-value=1.4e-12 Score=136.14 Aligned_cols=199 Identities=14% Similarity=0.055 Sum_probs=122.5
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
|.|+||+|||+|.||+++|..|+++|++|++||+++++++...+...+. ... .+. .....+..++++ ++
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~--~~~-~~~-------~~~~~~~~~~~~~~~ 82 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENV--LFL-KGV-------QLASNITFTSDVEKA 82 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCT--TTS-TTC-------BCCTTEEEESCHHHH
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCccc--ccc-ccc-------ccccceeeeCCHHHH
Confidence 3355899999999999999999999999999999998877653210000 000 000 000134555666 56
Q ss_pred CCCCCEEEEeccCChHHHHHHHHH----HHHhCCC-CcEEEecCCCCCHHH---HhcccCC--CC--cEEEecCCCCCC-
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLNI---VGEKTSS--QD--RIIGAHFFSPAH- 451 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~----l~~~~~~-~~ii~s~ts~~~~~~---~~~~~~~--~~--r~ig~h~~~p~~- 451 (589)
++++|+||+||| .....+++.+ +.+++++ +++|++.++++.+.. +.+.+.. +. ..+...|..+..
T Consensus 83 ~~~aDvVilav~--~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~ 160 (366)
T 1evy_A 83 YNGAEIILFVIP--TQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV 160 (366)
T ss_dssp HTTCSSEEECCC--HHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH
T ss_pred HcCCCEEEECCC--hHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH
Confidence 789999999999 4567788888 9888888 888888887765531 1111111 11 111112221110
Q ss_pred -CCCeeeEecCCCCCHHHHHHHHHHHHHc--CCeeEEEcCCCC----------------------ccccc---ccHHHHH
Q 007805 452 -VMPLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNCTG----------------------FAVNR---AFFPYSQ 503 (589)
Q Consensus 452 -~~~lveiv~~~~t~~e~~~~~~~l~~~l--G~~~v~v~d~~G----------------------fi~nR---i~~~~~~ 503 (589)
......++.+ ..+++..+.+.++++.. |..+++..|..| +..|. +....++
T Consensus 161 ~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 239 (366)
T 1evy_A 161 ATGVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLL 239 (366)
T ss_dssp HTTCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HhCCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHH
Confidence 1111112222 23678899999999999 887777666432 12232 2345667
Q ss_pred HHHHHHHc-CCCHHH
Q 007805 504 SARLLVSL-GVDVFR 517 (589)
Q Consensus 504 Ea~~l~~~-Gv~~~~ 517 (589)
|++.+.+. |+++++
T Consensus 240 E~~~la~a~Gi~~~~ 254 (366)
T 1evy_A 240 EIRDLTAALGGDGSA 254 (366)
T ss_dssp HHHHHHHHTTCCCTT
T ss_pred HHHHHHHHhCCCCcc
Confidence 99988865 886644
No 155
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.31 E-value=2.9e-12 Score=138.30 Aligned_cols=190 Identities=13% Similarity=0.065 Sum_probs=128.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC--
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-- 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~-- 385 (589)
++|+|||+|.||+++|..|+++|++|++||+++++++...+. ...| ..+..++++ +.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~--------~~~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN--------EAKG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT--------TTTT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc--------cccC-----------CCeEEeCCHHHHHhh
Confidence 479999999999999999999999999999999987765320 0001 124455566 333
Q ss_pred -CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCCC---CCCeeeE
Q 007805 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (589)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~~---~~~lvei 458 (589)
+++|+||+|||....+ ..++.++.+.++++++|++.+++.+.+ .+.+.+. ...+++++..+.++. ..+ .+
T Consensus 64 l~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~--~i 140 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQAV-DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP--SL 140 (482)
T ss_dssp BCSSCEEEECSCTTHHH-HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEeCCChHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC--eE
Confidence 5899999999965444 456688999999999888776666543 3443332 234566543222211 112 13
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCee-------EEEcC-CCC----ccccccc---HHHHHHHHHHHHc--CCCHHHHHHH
Q 007805 459 VRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (589)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~-------v~v~d-~~G----fi~nRi~---~~~~~Ea~~l~~~--Gv~~~~iD~~ 521 (589)
+.+. +++..+.++++++.+|.++ +++++ ..| ++.|.+. ...++|++.+.+. |++++++..+
T Consensus 141 ~~gg--~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 141 MPGG--NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEEE--CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 3332 5778899999999999876 44432 222 3446554 4567899988865 8899998887
Q ss_pred H
Q 007805 522 I 522 (589)
Q Consensus 522 ~ 522 (589)
+
T Consensus 219 ~ 219 (482)
T 2pgd_A 219 F 219 (482)
T ss_dssp H
T ss_pred H
Confidence 7
No 156
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.30 E-value=1.7e-12 Score=125.00 Aligned_cols=148 Identities=13% Similarity=0.098 Sum_probs=101.5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.++||+|||+|.||..+|..|++.|++|+++|+++++.+... +.| +... +. +.+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~-~~~~~~ 81 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSA-------------AQVT-FQEEAV 81 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTT-------------SEEE-EHHHHT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------Ccee-cHHHHH
Confidence 457899999999999999999999999999999988765531 111 2222 33 567
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHh----------cccCCCCcEEEecCCCCCC----
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGAHFFSPAH---- 451 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~----------~~~~~~~r~ig~h~~~p~~---- 451 (589)
+++|+||+|+|.+ ....++. +.+.. ++++|++.+++.+.+.+. +.++ ..++++.. |+..
T Consensus 82 ~~~DvVi~av~~~--~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~~--n~~~~~~~ 154 (215)
T 2vns_A 82 SSPEVIFVAVFRE--HYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKAF--NVISAWTL 154 (215)
T ss_dssp TSCSEEEECSCGG--GSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEEC--TTBCHHHH
T ss_pred hCCCEEEECCChH--HHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEecc--ccccHhHh
Confidence 8999999999853 3445554 55566 788999999888765542 3333 23555431 2211
Q ss_pred -----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 452 -----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 452 -----~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
..+...++.+ .+++.++.++++++.+|++++++++
T Consensus 155 ~~~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 155 QAGPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp HTCSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred cccccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 1111112222 3799999999999999999999876
No 157
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.30 E-value=1.8e-11 Score=128.79 Aligned_cols=199 Identities=18% Similarity=0.164 Sum_probs=127.4
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHH--------HHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKG 378 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (589)
.|.+|+|||+|.+|..+|.+|++.||+|+++|+|+++++...+. +...+.+.++ -+++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~------------~g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALS------------SGRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH------------cCCeeE
Confidence 57899999999999999999999999999999999998875321 1111111122 246788
Q ss_pred cCCc-cCCCCCCEEEEeccC--------ChHHHHHHHHHHHHhCC---CCcEEEecCCCCCHH---H-----HhcccCCC
Q 007805 379 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLN---I-----VGEKTSSQ 438 (589)
Q Consensus 379 ~~~~-~~~~~aDlVIeavpe--------~~~~k~~v~~~l~~~~~---~~~ii~s~ts~~~~~---~-----~~~~~~~~ 438 (589)
+++. +++++||++|+|||. |+.......+.|.++++ ++++|+. .||+++. + +.+.....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~~~ 166 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAGGV 166 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTTTC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCCCC
Confidence 8888 678999999999985 44556667777777764 3455543 3333321 1 11111111
Q ss_pred CcEEEecCCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEc----CCCCccccccc---HHHH
Q 007805 439 DRIIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVG----NCTGFAVNRAF---FPYS 502 (589)
Q Consensus 439 ~r~ig~h~~~p~~~~~lv---------eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~----d~~Gfi~nRi~---~~~~ 502 (589)
.-.++. +|-...+.- -++.| .+++++.+.+.++++.+....+++. |...++.|-.. .+++
T Consensus 167 ~f~v~~---~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~ 242 (444)
T 3vtf_A 167 KFSVAS---NPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFA 242 (444)
T ss_dssp CCEEEE---CCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cceeec---CcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHH
Confidence 112222 222211110 13322 2467888899999998877665542 22234556553 5788
Q ss_pred HHHHHHHHc-CCCHHHHHHHH
Q 007805 503 QSARLLVSL-GVDVFRIDSAI 522 (589)
Q Consensus 503 ~Ea~~l~~~-Gv~~~~iD~~~ 522 (589)
||...+.+. |+++.++=.++
T Consensus 243 NEla~ice~~GiDv~eV~~a~ 263 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTYRVFEAV 263 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHh
Confidence 998888876 99998887776
No 158
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.28 E-value=5.4e-12 Score=129.18 Aligned_cols=122 Identities=17% Similarity=0.236 Sum_probs=89.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+||+|||+|.||.++|..++..|+ +|++||+++++++.....+.+...... ...+++.++|++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIG------------SPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHT------------CCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccC------------CCCEEEECCCHHHHCC
Confidence 589999999999999999999999 999999999988864333333322110 1245777788888999
Q ss_pred CCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCcEE--EecCCCCCHHHHhcccC--CCCcEEEe
Q 007805 388 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 444 (589)
Q Consensus 388 aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~--~~~r~ig~ 444 (589)
||+||+++ |+ +..+++++++++.+++ |++++ +||++... +.+..... .|.|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 65 4567999999999998 56655 46655533 33332222 46677774
No 159
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.26 E-value=4.5e-12 Score=131.59 Aligned_cols=199 Identities=16% Similarity=0.030 Sum_probs=124.9
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCC-------CeEEEEeCChH-----HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHh
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNAL 373 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 373 (589)
|.++||+|||+|.||+++|..|+++| ++|++||++++ ..+...+...+ .... .+. ...
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~--~~~~-~~~-------~~~ 75 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHEN--VKYL-PGH-------KLP 75 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCC--TTTS-TTC-------CCC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcc--cccC-Ccc-------cCc
Confidence 34568999999999999999999999 99999999987 65543211000 0000 000 001
Q ss_pred hcccccCCc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--------HH-HhcccCCCCcEEE
Q 007805 374 KMLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NI-VGEKTSSQDRIIG 443 (589)
Q Consensus 374 ~~i~~~~~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--------~~-~~~~~~~~~r~ig 443 (589)
..+..++++ +++++||+||+|||+ ....+++.++.++++++++|++.++++.+ .+ +...++.+ ..+.
T Consensus 76 ~~~~~~~~~~~~~~~aD~Vilav~~--~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v~ 152 (354)
T 1x0v_A 76 PNVVAVPDVVQAAEDADILIFVVPH--QFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSVL 152 (354)
T ss_dssp TTEEEESSHHHHHTTCSEEEECCCG--GGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEEE
T ss_pred cCeEEEcCHHHHHcCCCEEEEeCCH--HHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEEE
Confidence 234555666 567899999999995 56788999999999999999998887653 11 12222211 1222
Q ss_pred ecCCCCCC--CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC----------------------ccccc---
Q 007805 444 AHFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVNR--- 496 (589)
Q Consensus 444 ~h~~~p~~--~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G----------------------fi~nR--- 496 (589)
..|..+.. ......++.+ ..+++..+.+.++++..|..+++..|..| +..|-
T Consensus 153 ~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~ 231 (354)
T 1x0v_A 153 MGANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAA 231 (354)
T ss_dssp ECSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ECCCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHH
Confidence 22322211 0111122222 24688899999999999998888776433 11231
Q ss_pred ccHHHHHHHHHHHHc-CC---CHHHH
Q 007805 497 AFFPYSQSARLLVSL-GV---DVFRI 518 (589)
Q Consensus 497 i~~~~~~Ea~~l~~~-Gv---~~~~i 518 (589)
+....++|+.++.+. |+ +++++
T Consensus 232 ~~~~~~~E~~~la~a~G~~~~~~~~~ 257 (354)
T 1x0v_A 232 VIRLGLMEMIAFAKLFCSGPVSSATF 257 (354)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCCGGGG
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcccc
Confidence 234556788888866 87 77553
No 160
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.26 E-value=2.4e-12 Score=134.53 Aligned_cols=154 Identities=11% Similarity=0.063 Sum_probs=110.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC------CCeEEEEeCChH-HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
++||+|||+|+||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... -....
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~---------d~ta~ 113 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE---------SGTLG 113 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT---------TTCEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe---------cCCCC
Confidence 37899999999999999999999 999987766533 33332 12221100 00012
Q ss_pred Cc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhc---ccCCCCcEEEecCCCCCCC----
Q 007805 381 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV---- 452 (589)
Q Consensus 381 ~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~---~~~~~~r~ig~h~~~p~~~---- 452 (589)
+. +++++||+||+++|. ....+++.+|.++++++++| +.+.++.+..+.. ..+....++..||..|.+.
T Consensus 114 s~aEAa~~ADVVILaVP~--~~~~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~ 190 (525)
T 3fr7_A 114 DIWETVSGSDLVLLLISD--AAQADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRL 190 (525)
T ss_dssp EHHHHHHHCSEEEECSCH--HHHHHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHH
T ss_pred CHHHHHhcCCEEEECCCh--HHHHHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHH
Confidence 33 678999999999994 43457889999999999985 7888888877664 3334457999999998875
Q ss_pred ---C-----Cee--eEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 007805 453 ---M-----PLL--EIVRTERTSAQVILDLMTVGKIIKKVPV 484 (589)
Q Consensus 453 ---~-----~lv--eiv~~~~t~~e~~~~~~~l~~~lG~~~v 484 (589)
+ ..+ -+..+...+.+..+.+..++..+|...+
T Consensus 191 y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 191 YVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 1 112 2334445677889999999999998753
No 161
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.24 E-value=1e-11 Score=139.28 Aligned_cols=91 Identities=16% Similarity=0.236 Sum_probs=83.5
Q ss_pred ccccccHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCC---cHHHHHHHhchHHHHHHHHHHHHhCCC--CCCchHHH
Q 007805 493 AVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVAAATSKEFDKAFPD--RSFQSPLV 564 (589)
Q Consensus 493 i~nRi~~~~~~Ea~~l~~~Gv--~~~~iD~~~-~~~g~p~---Gpf~~~D~~Gld~~~~~~~~l~~~~~~--~~~~~~~l 564 (589)
|..|++++++||+.+++++|| ++.|||.++ .|+|||. |||+|+|.+|++.+++.++.+++.+|+ ++.|+++|
T Consensus 638 i~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~L 717 (742)
T 3zwc_A 638 ILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYL 717 (742)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHHH
Confidence 789999999999999999998 899999999 9999997 999999999999999999999999997 46699999
Q ss_pred HHHHHcCCCCc---ccceeeCC
Q 007805 565 DLLLKSGRNGN---KGFSFLFV 583 (589)
Q Consensus 565 ~~~v~~g~~G~---~Gfy~y~~ 583 (589)
++|+++|.... +|||.|.+
T Consensus 718 ~~ma~~G~~~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 718 RRLVAQGSPPLKEWQSLAGPHG 739 (742)
T ss_dssp HHHHHTTCCCGGGHHHHHSTTC
T ss_pred HHHHHcCCCcccccccccCCCC
Confidence 99999997766 77776654
No 162
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.22 E-value=1.4e-11 Score=125.71 Aligned_cols=123 Identities=20% Similarity=0.303 Sum_probs=88.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+...+.... ...+++.++|+++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY------------SNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT------------CCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC------------CCcEEEECCCHHHhC
Confidence 4689999999999999999999998 999999999888764444433322110 113567778888899
Q ss_pred CCCEEEEec--cCCh-----------------HHHHHHHHHHHHhCCCCcEE--EecCCCCCHHHHhcccC--CCCcEEE
Q 007805 387 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIG 443 (589)
Q Consensus 387 ~aDlVIeav--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~--~~~r~ig 443 (589)
+||+||+++ |+++ .+++++++++.+++ |++++ +||++.+. +.+..... .+.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 7543 37889999999998 66655 46655543 33332222 4567777
Q ss_pred e
Q 007805 444 A 444 (589)
Q Consensus 444 ~ 444 (589)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 4
No 163
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.21 E-value=3.7e-11 Score=126.64 Aligned_cols=199 Identities=17% Similarity=0.170 Sum_probs=123.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcC-CCCHHHHHHHh----hcccccCCc-
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNAL----KMLKGVLDY- 382 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~----~~i~~~~~~- 382 (589)
+||+|||+|.||.++|..|++ |++|++||+++++++...+ .+ .+.....+..+ .++.+++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~-----------~~~~i~e~~l~~~~~~~~~~l~~t~~~~ 68 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINN-----------GLSPIQDEYIEYYLKSKQLSIKATLDSK 68 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHT-----------TCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHc-----------CCCCcCCCCHHHHHHhccCcEEEeCCHH
Confidence 379999999999999999999 9999999999998776422 11 11111111111 245667776
Q ss_pred cCCCCCCEEEEeccCCh---------HHHHHHHHHHHHhCCCCcEEEe-cCCCCCH-HHHhcccCCCCcEEEecC--CCC
Q 007805 383 SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILAT-NTSTIDL-NIVGEKTSSQDRIIGAHF--FSP 449 (589)
Q Consensus 383 ~~~~~aDlVIeavpe~~---------~~k~~v~~~l~~~~~~~~ii~s-~ts~~~~-~~~~~~~~~~~r~ig~h~--~~p 449 (589)
+++++||+||+|||... ....++++++.+ ++++++|+. +|.+... ..+...+... .+...| ..|
T Consensus 69 ~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~ 145 (402)
T 1dlj_A 69 AAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRE 145 (402)
T ss_dssp HHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCT
T ss_pred HHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccC
Confidence 66889999999999763 146777888888 888888775 3333332 3454444332 223222 111
Q ss_pred CCCC-Cee---eEecCCCCC-----HHHHHHHHHHHHHcCC--e-eEEEcCCC-----Cccccccc---HHHHHHHHHHH
Q 007805 450 AHVM-PLL---EIVRTERTS-----AQVILDLMTVGKIIKK--V-PVVVGNCT-----GFAVNRAF---FPYSQSARLLV 509 (589)
Q Consensus 450 ~~~~-~lv---eiv~~~~t~-----~e~~~~~~~l~~~lG~--~-~v~v~d~~-----Gfi~nRi~---~~~~~Ea~~l~ 509 (589)
.... ... .++.|.... .+..+.+.+++...+. . ++++.+.. .++.|-+. .+++||+..+.
T Consensus 146 G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~ 225 (402)
T 1dlj_A 146 SKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYA 225 (402)
T ss_dssp TSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 000 133332221 1556777787865332 2 56665532 24445543 46789999888
Q ss_pred Hc-CCCHHHHHHHH
Q 007805 510 SL-GVDVFRIDSAI 522 (589)
Q Consensus 510 ~~-Gv~~~~iD~~~ 522 (589)
+. |++++++-.++
T Consensus 226 ~~~Gid~~~v~~~~ 239 (402)
T 1dlj_A 226 ESRKLNSHMIIQGI 239 (402)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHhCCCHHHHHHHh
Confidence 76 99999988887
No 164
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.21 E-value=1.2e-11 Score=129.39 Aligned_cols=197 Identities=11% Similarity=-0.015 Sum_probs=123.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC-------CeEEEEeCChH-----HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhc
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 375 (589)
++||+|||+|.||++||..|+++| ++|++||++++ .++...+. .......+. ......
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~--------~~~~~~~~~--~~~~~~ 90 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNK--------HENTKYLKG--VPLPHN 90 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHH--------CBCTTTSTT--CBCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhc--------CcccccCCc--ccCcCC
Confidence 468999999999999999999999 99999999987 55443211 000000000 000123
Q ss_pred ccccCCc-cCCCCCCEEEEeccCChHHHHHHHHHHHH----hCCCCcEEEecCCCCCHH-----HH----hcccCCCCcE
Q 007805 376 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDLN-----IV----GEKTSSQDRI 441 (589)
Q Consensus 376 i~~~~~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~----~~~~~~ii~s~ts~~~~~-----~~----~~~~~~~~r~ 441 (589)
+..++++ +++++||+||+||| .....+++.++.+ .++++++|++.++++.+. .+ ....+.+ ..
T Consensus 91 i~~~~~~~ea~~~aDvVilav~--~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~ 167 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVP--CQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-CS 167 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCC--HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-EE
T ss_pred eEEECCHHHHHcCCCEEEEcCC--HHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-EE
Confidence 5566666 56889999999999 4678889999988 899999999988776541 11 2222211 11
Q ss_pred EEecCCCCCC--CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC----------------------cccccc
Q 007805 442 IGAHFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVNRA 497 (589)
Q Consensus 442 ig~h~~~p~~--~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G----------------------fi~nRi 497 (589)
+...|..+.. ......++.+ ..+++..+.+.++++..|..+++..|..| +..|..
T Consensus 168 v~~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~ 246 (375)
T 1yj8_A 168 ALSGANIAMDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSK 246 (375)
T ss_dssp EEECSCCHHHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred EEeCCchHHHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHH
Confidence 1222221110 0111122222 23678899999999999999888887643 222322
Q ss_pred ---cHHHHHHHHHHHHc---CCCHHHH
Q 007805 498 ---FFPYSQSARLLVSL---GVDVFRI 518 (589)
Q Consensus 498 ---~~~~~~Ea~~l~~~---Gv~~~~i 518 (589)
....++|+..+.+. |++++++
T Consensus 247 ~a~~~~~~~E~~~la~a~G~G~~~~~~ 273 (375)
T 1yj8_A 247 SAIIRNGINEMILFGKVFFQKFNENIL 273 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcchh
Confidence 34455688877754 4766544
No 165
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.20 E-value=6.5e-12 Score=126.42 Aligned_cols=163 Identities=12% Similarity=-0.019 Sum_probs=104.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
+||+|||+|.||+++|..|+++|++|++||+++++++.. ...+... . .....+. .++.+.++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~~~-~---~~~~~~~-~~~~~~~~~~ 64 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVETDG-S---IFNESLT-ANDPDFLATS 64 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECTTS-C---EEEEEEE-ESCHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcCCC-c---eeeeeee-ecCccccCCC
Confidence 379999999999999999999999999999998654321 1111000 0 0000111 2334667889
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH-HHhcccCCCCcEE-EecCC-----CC-C-CCC-CeeeE
Q 007805 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFF-----SP-A-HVM-PLLEI 458 (589)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~-~~~~~~~~~~r~i-g~h~~-----~p-~-~~~-~lvei 458 (589)
|+||.|+|.+. ..++++++.+.++++++|++.++++... .+.+.++ . ++ |.+++ .| + ... ..+.+
T Consensus 65 d~vi~~v~~~~--~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p~~~~~~~g~~~i 139 (291)
T 1ks9_A 65 DLLLVTLKAWQ--VSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGNVIIHVANGITHI 139 (291)
T ss_dssp SEEEECSCGGG--HHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETTEEEEEECCCEEE
T ss_pred CEEEEEecHHh--HHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCCEEEEecccceEE
Confidence 99999999653 5788899999999999888887777553 4444433 2 44 33322 22 0 000 01112
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcc
Q 007805 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 493 (589)
Q Consensus 459 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi 493 (589)
.+. ..+++.++.+.++++.+|..+++.+|..+..
T Consensus 140 ~~~-~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~ 173 (291)
T 1ks9_A 140 GPA-RQQDGDYSYLADILQTVLPDVAWHNNIRAEL 173 (291)
T ss_dssp EES-SGGGTTCTHHHHHHHTTSSCEEECTTHHHHH
T ss_pred ccC-CCCcchHHHHHHHHHhcCCCCeecHHHHHHH
Confidence 221 1345677889999999999988887744433
No 166
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.19 E-value=6.4e-11 Score=121.75 Aligned_cols=191 Identities=14% Similarity=0.054 Sum_probs=120.1
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHHhhcccccC--Cc-c
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY-S 383 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~--~~-~ 383 (589)
||+|||+|.||+++|..|+++|++|++||+ ++++++... +.|. +... . .+..+..++ ++ +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~g-~--~~~~~~~~~~~~~~~ 67 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-----------AGREHPRLG-V--KLNGVEIFWPEQLEK 67 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-----------TTCCBTTTT-B--CCCSEEEECGGGHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHH-----------HhCcCcccC-c--cccceEEecHHhHHH
Confidence 799999999999999999999999999999 888776532 1221 0000 0 001223444 55 5
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC---C---HHHHhcccCC--CCcEEEecCCCCCCC---
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---D---LNIVGEKTSS--QDRIIGAHFFSPAHV--- 452 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~---~---~~~~~~~~~~--~~r~ig~h~~~p~~~--- 452 (589)
.++++|+||.|+|.+ ...+++.++.+ ++++++|++.+.++ + ...+.+.+.. +..........|...
T Consensus 68 ~~~~~D~vi~~v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 144 (335)
T 1txg_A 68 CLENAEVVLLGVSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV 144 (335)
T ss_dssp HHTTCSEEEECSCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH
T ss_pred HHhcCCEEEEcCChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH
Confidence 578999999999854 56788899998 98899888877666 2 2344443332 110001111222211
Q ss_pred --CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC----------------------cc-----ccc---ccHH
Q 007805 453 --MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FA-----VNR---AFFP 500 (589)
Q Consensus 453 --~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G----------------------fi-----~nR---i~~~ 500 (589)
.....++.+. .+++..+.+.++++..|..+++..|..+ +. .|- +...
T Consensus 145 ~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~ 223 (335)
T 1txg_A 145 AKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATR 223 (335)
T ss_dssp HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 1111233332 3688899999999999988887776422 11 222 2345
Q ss_pred HHHHHHHHHHc-CCCHHHH
Q 007805 501 YSQSARLLVSL-GVDVFRI 518 (589)
Q Consensus 501 ~~~Ea~~l~~~-Gv~~~~i 518 (589)
.++|+..+.+. |++++++
T Consensus 224 ~~~E~~~la~~~G~~~~~~ 242 (335)
T 1txg_A 224 AINEMAELIEILGGDRETA 242 (335)
T ss_dssp HHHHHHHHHHHHTSCGGGG
T ss_pred HHHHHHHHHHHHCCCcchh
Confidence 56798888865 8876544
No 167
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.18 E-value=6.5e-11 Score=121.91 Aligned_cols=187 Identities=12% Similarity=-0.012 Sum_probs=112.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
.||+|||+|.||+.||..|+++|++|++||+++++++...+ .|... ......+ .+..+++.+.++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~-----------~g~~~-~~~~~~~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINV-----------SHTSP-YVEESKI-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------HSCBT-TBTTCCC-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH-----------hCCcc-cCCCCee-eEEEeCCHHHhcCC
Confidence 57999999999999999999999999999999988766422 11000 0000000 24556666338899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH---Hhc----ccCCCCcEEEecCCCCCC--CCCeeeEe
Q 007805 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGE----KTSSQDRIIGAHFFSPAH--VMPLLEIV 459 (589)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~---~~~----~~~~~~r~ig~h~~~p~~--~~~lveiv 459 (589)
|+||.|||. ....+++.++.+ +++++++.+.++.... +++ ... ....+...|..+.. ......++
T Consensus 82 DvVil~vk~--~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~~~g~~~~~~ 155 (335)
T 1z82_A 82 DILVIAIPV--QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEVAKKLPTAVT 155 (335)
T ss_dssp EEEEECSCG--GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHHHTTCCEEEE
T ss_pred CEEEEECCH--HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHHhCCCceEEE
Confidence 999999983 445566655544 6778887776655421 111 111 11122222322211 11112222
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC----------------------cccc---cccHHHHHHHHHHHHc-CC
Q 007805 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVN---RAFFPYSQSARLLVSL-GV 513 (589)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G----------------------fi~n---Ri~~~~~~Ea~~l~~~-Gv 513 (589)
.+.. + .+.+.++++..|..+.+..|..| +..| .+....+.|+..+.+. |+
T Consensus 156 ~g~~-~---~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~ 231 (335)
T 1z82_A 156 LAGE-N---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGA 231 (335)
T ss_dssp EEET-T---HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeh-h---HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCC
Confidence 2211 2 67889999999988877766432 1122 2334566799888865 99
Q ss_pred CHHHH
Q 007805 514 DVFRI 518 (589)
Q Consensus 514 ~~~~i 518 (589)
+++++
T Consensus 232 ~~~~~ 236 (335)
T 1z82_A 232 DQKTF 236 (335)
T ss_dssp CHHHH
T ss_pred Chhhh
Confidence 88765
No 168
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.17 E-value=2.6e-11 Score=124.27 Aligned_cols=122 Identities=21% Similarity=0.282 Sum_probs=88.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc-CCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 386 (589)
+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+..... + ...+++.++|++ +++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCHHHHhC
Confidence 589999999999999999999998 99999999988887544444333211 1 113577778885 899
Q ss_pred CCCEEEEec--cCCh-----------------HHHHHHHHHHHHhCCCCcEE--EecCCCCCHHHHh-cccC-CCCcEEE
Q 007805 387 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVG-EKTS-SQDRIIG 443 (589)
Q Consensus 387 ~aDlVIeav--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~-~~~~-~~~r~ig 443 (589)
+||+||+++ |+++ .+++++++++.+++ |++++ +||++++. +.+. .... .+.|++|
T Consensus 78 ~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rviG 155 (331)
T 1pzg_A 78 GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMICG 155 (331)
T ss_dssp TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEEe
Confidence 999999999 7654 34889999999998 66665 46655543 3333 2222 4667777
Q ss_pred e
Q 007805 444 A 444 (589)
Q Consensus 444 ~ 444 (589)
+
T Consensus 156 ~ 156 (331)
T 1pzg_A 156 M 156 (331)
T ss_dssp C
T ss_pred c
Confidence 4
No 169
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.17 E-value=8e-12 Score=132.37 Aligned_cols=86 Identities=19% Similarity=0.229 Sum_probs=74.8
Q ss_pred CCcccccccHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCC---cHHHHHHHhchHHHHHHHHHHHHhCCCC--CCch
Q 007805 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQS 561 (589)
Q Consensus 490 ~Gfi~nRi~~~~~~Ea~~l~~~Gv--~~~~iD~~~-~~~g~p~---Gpf~~~D~~Gld~~~~~~~~l~~~~~~~--~~~~ 561 (589)
...+.+|++++++||+.+++++|| +++|||.++ .|+|||. |||+|+|.+|++.+...++.|++.+|++ +.|+
T Consensus 355 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~~~~~l~~l~~~~g~~~~~~p~ 434 (460)
T 3k6j_A 355 DQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYIVA 434 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHHHHHHHHHHHHHCTTCGGGSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 346889999999999999999998 699999999 9999997 9999999999999999999999999998 6799
Q ss_pred HHHHHHHHcCCCCc
Q 007805 562 PLVDLLLKSGRNGN 575 (589)
Q Consensus 562 ~~l~~~v~~g~~G~ 575 (589)
++|++|+++|++|.
T Consensus 435 ~~L~~~a~~g~~~~ 448 (460)
T 3k6j_A 435 DALKTANVSTGSSG 448 (460)
T ss_dssp HHHHHHC-------
T ss_pred HHHHHHHHcCCCcc
Confidence 99999999999998
No 170
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.14 E-value=1.5e-10 Score=118.28 Aligned_cols=174 Identities=14% Similarity=0.089 Sum_probs=115.2
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
.++||+|||+|.||+.+|..|+++|++|++| ++++.++...+.- + ....... .....+..+++.+.++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g---~--~~~~~~~------~~~~~~~~~~~~~~~~ 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATG---L--RLETQSF------DEQVKVSASSDPSAVQ 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHC---E--EEECSSC------EEEECCEEESCGGGGT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCC---e--EEEcCCC------cEEEeeeeeCCHHHcC
Confidence 4678999999999999999999999999999 9988877653210 0 0000000 0012345566776778
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH-HHHhcccCCCCcEEEec------CCCCCCC---CCee
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH------FFSPAHV---MPLL 456 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~h------~~~p~~~---~~lv 456 (589)
++|+||+|||.. ...++++++.++++++++|++.++++.. +.+.+.++ .++++.. ...|-.. ...
T Consensus 86 ~~D~vilavk~~--~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g- 160 (318)
T 3hwr_A 86 GADLVLFCVKST--DTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRG- 160 (318)
T ss_dssp TCSEEEECCCGG--GHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEE-
T ss_pred CCCEEEEEcccc--cHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCc-
Confidence 999999999954 4678899999999999999999999987 45555554 4444321 1122111 111
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHH
Q 007805 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (589)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~ 500 (589)
.++-+. .+..+.+.+++...|..+.+..|..|.....++.+
T Consensus 161 ~~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N 201 (318)
T 3hwr_A 161 ELVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILN 201 (318)
T ss_dssp EEEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred eEEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHH
Confidence 122222 23456788889999988888788776555554443
No 171
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.13 E-value=5.8e-11 Score=121.06 Aligned_cols=166 Identities=10% Similarity=-0.012 Sum_probs=104.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-----C-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHH-HHHHHhhcccccC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVL 380 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-----G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~ 380 (589)
++||+|||+|.||+.+|..|+++ | ++|++||+ +++++...+. .|..... .-......+..++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAA----------GGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHH----------TSEEEECSSCEEEECCSEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhc----------CCeEEEeCCCCeEEecceEec
Confidence 35899999999999999999999 9 99999999 7665553210 1110000 0000000122334
Q ss_pred CccCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH-HHHhcccCCCCcEEEecCCCCCCC-------
Q 007805 381 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAHFFSPAHV------- 452 (589)
Q Consensus 381 ~~~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~h~~~p~~~------- 452 (589)
+.+.++++|+||.|||... ..+++.++.+.++++++|++.+.++.. +.+.+.++.. +++...++.+...
T Consensus 77 ~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~-~v~~g~~~~~a~~~~pg~~~ 153 (317)
T 2qyt_A 77 NPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDT-VVWKGCVYISARKSAPGLIT 153 (317)
T ss_dssp CHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTT-TBCEEEEEEEEEEEETTEEE
T ss_pred CccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCC-cEEEEEEEEEEEEcCCCEEE
Confidence 4456789999999998654 467888999988888888887778776 4555555432 3322222211111
Q ss_pred --CCeeeE-ecC--CCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 453 --MPLLEI-VRT--ERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 453 --~~lvei-v~~--~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
.....+ +.. ...+++.+ .+.++++..|..+.+..|
T Consensus 154 ~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~d 193 (317)
T 2qyt_A 154 LEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTD 193 (317)
T ss_dssp EEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSC
T ss_pred EcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchH
Confidence 111112 322 33457777 899999999988777665
No 172
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.10 E-value=8.9e-11 Score=119.86 Aligned_cols=159 Identities=17% Similarity=0.211 Sum_probs=105.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+..... .. . ..++.. ++.++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~--~----------~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT--R----------RANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS--C----------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc--C----------CcEEEe-CCHHHhC
Confidence 479999999999999999999999 999999999887764333322211 00 0 023333 3567889
Q ss_pred CCCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCcEEE--ecCCCCCHHHHh-cccC-CCCcEEEecCCC
Q 007805 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVG-EKTS-SQDRIIGAHFFS 448 (589)
Q Consensus 387 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~--s~ts~~~~~~~~-~~~~-~~~r~ig~h~~~ 448 (589)
+||+||+|+|.. ..+++++++++.+++ ++++++ ||.+... +.+. .... .+.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~-~~~~~~~~~~~~~rviG~---- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVL-TYFFLKESGMDPRKVFGS---- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHH-HHHHHHHHTCCTTTEEEC----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHH-HHHHHHHhCCChhhEEee----
Confidence 999999999852 245788889999987 555543 4443332 2333 2222 46677775
Q ss_pred CCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccc---cccHHHHHH
Q 007805 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN---RAFFPYSQS 504 (589)
Q Consensus 449 p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~n---Ri~~~~~~E 504 (589)
.|..+.......+.+.+|..+ ++.++++.+ ..+++++++
T Consensus 141 --------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G~hg~~~~p~~s~ 182 (319)
T 1a5z_A 141 --------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIGEHGDSEVPVWSG 182 (319)
T ss_dssp --------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEBCSSTTCEECGGG
T ss_pred --------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEeCCCCCcccchhh
Confidence 356666666667778888654 566677776 555555544
No 173
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.69 E-value=8.5e-12 Score=118.62 Aligned_cols=149 Identities=14% Similarity=0.158 Sum_probs=100.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
.++|+|||+|.||..+|..|.+.|++|++||++++ .+.. ...| +...+..+.+++
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~-----------~~~g-------------~~~~~~~~~~~~ 73 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSL-----------LPRG-------------AEVLCYSEAASR 73 (201)
Confidence 35799999999999999999999999999999876 3221 0111 122222266789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--------HHHhcccCCCCcEEEecCCCCCCCCC-ee--
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL-- 456 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--------~~~~~~~~~~~r~ig~h~~~p~~~~~-lv-- 456 (589)
+|+||.|+|.+ . ...++ ++.+ ..++++|++.+++++. +.+.+.++. .+++...++.|..... ..
T Consensus 74 aDvVilav~~~-~-~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~ 148 (201)
T 2yjz_A 74 SDVIVLAVHRE-H-YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLD 148 (201)
Confidence 99999999854 2 34454 4544 3467788888877753 344443332 3566666655554332 11
Q ss_pred ----eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 007805 457 ----EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (589)
Q Consensus 457 ----eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 488 (589)
.++.+. +++..+.+.++++.+|++++.+++
T Consensus 149 g~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 149 ASRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 233332 578899999999999999998876
No 174
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=99.07 E-value=1.1e-10 Score=117.97 Aligned_cols=122 Identities=21% Similarity=0.266 Sum_probs=82.6
Q ss_pred CCCccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 304 ~~~~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
....++||+|||+|.||.++|..++..|+ +|+++|++++....+.+-. . .. ..+++.++|
T Consensus 10 ~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~-----~~------------~~~i~~t~d 71 (303)
T 2i6t_A 10 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-I-----FN------------LPNVEISKD 71 (303)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-H-----HT------------CTTEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-h-----hc------------CCCeEEeCC
Confidence 34456899999999999999999999999 9999999986322332211 0 00 125666778
Q ss_pred ccCCCCCCEEEEec-------------cCChHHHHHHHHHHHHhCCCCcEE--EecCCCCCHHHHhcccC-CCCcEEEe
Q 007805 382 YSEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS-SQDRIIGA 444 (589)
Q Consensus 382 ~~~~~~aDlVIeav-------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~-~~~r~ig~ 444 (589)
++++++||+||+++ .++..+++++++++.+++ |++++ +||.+......+..... .+.|++|+
T Consensus 72 ~~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 72 LSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp GGGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 88999999999997 889999999999999998 66665 46644322222222222 25677775
No 175
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.07 E-value=1.2e-10 Score=131.36 Aligned_cols=87 Identities=20% Similarity=0.190 Sum_probs=82.1
Q ss_pred CCcccccccHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCC---cHHHHHHHhchHHHHHHHHHHHHhCCCCCCchHH
Q 007805 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 563 (589)
Q Consensus 490 ~Gfi~nRi~~~~~~Ea~~l~~~Gv--~~~~iD~~~-~~~g~p~---Gpf~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~ 563 (589)
++.|.+|++.+++||+.+++++|| +++|||.++ .|+|||. |||+|+|.+|++.+++.++.+++.+|+++.|+++
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~p~~~ 703 (725)
T 2wtb_A 624 EKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAF 703 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHH
Confidence 457889999999999999999997 999999999 8999998 9999999999999999999999999988789999
Q ss_pred HHHHHHcCCCCccccee
Q 007805 564 VDLLLKSGRNGNKGFSF 580 (589)
Q Consensus 564 l~~~v~~g~~G~~Gfy~ 580 (589)
|++|+++| ++||.
T Consensus 704 l~~~~~~g----~~f~~ 716 (725)
T 2wtb_A 704 LAERGSKG----VLLSA 716 (725)
T ss_dssp HHHHHHHT----CCSSS
T ss_pred HHHHHHcC----CCccc
Confidence 99999999 89985
No 176
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.06 E-value=1.4e-10 Score=130.66 Aligned_cols=86 Identities=15% Similarity=0.257 Sum_probs=80.6
Q ss_pred CCcccccccHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCC---cHHHHHHHhchHHHHHHHHHHHHhCCCCCCchHH
Q 007805 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 563 (589)
Q Consensus 490 ~Gfi~nRi~~~~~~Ea~~l~~~Gv--~~~~iD~~~-~~~g~p~---Gpf~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~ 563 (589)
++.|.+|++.+++||+.+++++|| +++|||.++ .|+|||. |||+|+|.+|++.+++.++.+ +.+|+++.|+++
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~p~~~ 702 (715)
T 1wdk_A 624 DEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAK 702 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCCCCHH
Confidence 457899999999999999999997 999999999 8999998 999999999999999999999 888977789999
Q ss_pred HHHHHHcCCCCccccee
Q 007805 564 VDLLLKSGRNGNKGFSF 580 (589)
Q Consensus 564 l~~~v~~g~~G~~Gfy~ 580 (589)
|.+|+++| ++||.
T Consensus 703 l~~~~~~g----~~f~~ 715 (715)
T 1wdk_A 703 LREMAKNG----QSFFG 715 (715)
T ss_dssp HHHHHHTT----CCSCC
T ss_pred HHHHHHcC----CCCCC
Confidence 99999999 88983
No 177
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.05 E-value=4.9e-10 Score=115.30 Aligned_cols=169 Identities=11% Similarity=0.137 Sum_probs=106.4
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
.++||+|||+|.||+.+|..|+++|++|++||++ +..+... +.|.............+..+++.+.++
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQ-----------TAGLRLTEDGATHTLPVRATHDAAALG 69 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHH-----------HTCEEEEETTEEEEECCEEESCHHHHC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHH-----------HCCCEEecCCCeEEEeeeEECCHHHcC
Confidence 3578999999999999999999999999999995 4444321 122100000000001234456666678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC-------------------H-HHHhcccCCCCcEEEec-
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------L-NIVGEKTSSQDRIIGAH- 445 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~-------------------~-~~~~~~~~~~~r~ig~h- 445 (589)
++|+||+|||. ....++++++.++++++++|++...+++ . +.+.+.++ ..++++..
T Consensus 70 ~~D~Vilavk~--~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~ 146 (335)
T 3ghy_A 70 EQDVVIVAVKA--PALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVV 146 (335)
T ss_dssp CCSEEEECCCH--HHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEE
T ss_pred CCCEEEEeCCc--hhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEE
Confidence 99999999984 4566888889999999999998888853 1 13444443 23444322
Q ss_pred C-----CCCCC---CCCeeeEecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 007805 446 F-----FSPAH---VMPLLEIVRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (589)
Q Consensus 446 ~-----~~p~~---~~~lveiv~~--~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G 491 (589)
+ ..|-. .... .++-| ...+.+..+.+.+++...|..+.+..|..+
T Consensus 147 ~~~a~~~~pg~v~~~~~g-~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~ 201 (335)
T 3ghy_A 147 HLTCATVSPGHIRHGNGR-RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQR 201 (335)
T ss_dssp CCCEEESSTTEEEECSCC-EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHH
T ss_pred EEEEEEcCCcEEEECCCC-eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHH
Confidence 1 11111 0011 12212 223457778899999999988887777665
No 178
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.01 E-value=1.7e-09 Score=110.08 Aligned_cols=173 Identities=12% Similarity=0.027 Sum_probs=109.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+||+|||+|.||+.+|..|+++|++|++|++++ .+... +.|.. ........+..+..+++.+.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~-----------~~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIA-----------GNGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHH-----------HTCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHH-----------hCCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 589999999999999999999999999999986 23321 11210 00000000012334456666789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH-HHHhcccCCCCcEEEecC------CCCCC---CCCe-e
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAHF------FSPAH---VMPL-L 456 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~h~------~~p~~---~~~l-v 456 (589)
+|+||.||| .....++++++.++++++++|++...++.. +.+.+.++. .++++... ..|-. ..+. +
T Consensus 70 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLK--TFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCC--GGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecC--CCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998 444558899999999999999999999874 456555543 24444321 11211 1111 1
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccc
Q 007805 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497 (589)
Q Consensus 457 eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi 497 (589)
.+-..+..+.+..+.+.+++...|..+.+..|.-+.....+
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl 187 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKL 187 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHH
Confidence 12222334567788899999999988877777654433333
No 179
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.99 E-value=1.1e-09 Score=104.20 Aligned_cols=143 Identities=19% Similarity=0.168 Sum_probs=99.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.++..+.+.+.+.|..++.++.++.|+|.=. |.|+++. ....++ +.|..+++||++.+.
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~In----SPGG~v~----------------a~~~I~-~~i~~~~~pV~~~v~ 93 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYIN----SPGGSIS----------------AGMAIY-DTMVLAPCDIATYAM 93 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHCSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEC
Confidence 4788999999999999987777777777421 2222221 123455 678889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeccccccCCCCChhhh------------------hhHhhhcC--HHHHHHHHH
Q 007805 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLVG--LSKAIEMML 164 (589)
Q Consensus 107 G~a~GgG~~lala~D~--~ia~~~a~~~~pe~~~Gl~p~~g~~------------------~~l~~~~G--~~~a~~l~l 164 (589)
|.|.++|..++++||. |++.+++.+++....-|. .|-. ..+.+..| .....+++.
T Consensus 94 g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~ 170 (208)
T 2cby_A 94 GMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSD 170 (208)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred cEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHh
Confidence 9999999999999998 999999999887654221 1110 11333333 344667888
Q ss_pred cCCCCCHHHHHHcCCcceecC-chHHHHHH
Q 007805 165 LSKSITSEEGWKLGLIDAVVT-SEELLKVS 193 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~-~~~l~~~a 193 (589)
.|+.++++||+++||||++.+ .+++++..
T Consensus 171 ~~~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 171 RDRWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp TTCEEEHHHHHHHTSCSEECSCC-------
T ss_pred CCcEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 999999999999999999984 44555443
No 180
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.96 E-value=1.1e-09 Score=111.23 Aligned_cols=99 Identities=14% Similarity=0.243 Sum_probs=73.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+..... ......+++.+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~------------~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP------------IEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHh------------hcCCCeEEEECCCHHHHCC
Confidence 689999999999999999999997 999999999877642222211100 0001134666678888999
Q ss_pred CCEEEEec--------------cCChHHHHHHHHHHHHhCCCCcEEE
Q 007805 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILA 420 (589)
Q Consensus 388 aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~ 420 (589)
||+||+++ .++..+++++++++.+++ |+++++
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi 116 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVII 116 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEE
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 99999997 344577888999999987 666653
No 181
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.90 E-value=1.2e-09 Score=110.64 Aligned_cols=120 Identities=19% Similarity=0.293 Sum_probs=79.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.||.++|..++..|+ +|++||+++++++..... +.... . .. ...+++. +++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~--------l~~~~-~---~~-~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAED--------IAHAA-P---VS-HGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH--------HTTSC-C---TT-SCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHh--------hhhhh-h---hc-CCeEEEE-CCHHHhC
Confidence 489999999999999999999999 999999998766532111 11111 0 00 0012333 4668899
Q ss_pred CCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCcEEE--ecCCCCCHHHHhcccCCCCcEEEe
Q 007805 387 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTSSQDRIIGA 444 (589)
Q Consensus 387 ~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~--s~ts~~~~~~~~~~~~~~~r~ig~ 444 (589)
+||+||+++ |. +..+++++++++.+++ ++++++ ||.+......+.... .+.|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999999 43 3457789999999986 666553 555443333333333 56677774
No 182
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.89 E-value=3.3e-09 Score=108.31 Aligned_cols=166 Identities=15% Similarity=0.100 Sum_probs=106.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhH---hcCCCCHHHHHHHhhcccccCCccCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV---TRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
+||+|||+|.||+.+|..|+++|++|++|++++. +...+. .+ .+ ..|... +..+..+++.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~---Gl--~~~~~~~g~~~-------~~~~~~~~~~~~~ 68 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAK---GI--RIRSATLGDYT-------FRPAAVVRSAAEL 68 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHH---CE--EEEETTTCCEE-------ECCSCEESCGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhC---Cc--EEeecCCCcEE-------EeeeeeECCHHHc
Confidence 5899999999999999999999999999999862 322110 00 00 011100 0123445666444
Q ss_pred -CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH-HHHhcccCCCCcEEEecCC------CCCCC---CC
Q 007805 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAHFF------SPAHV---MP 454 (589)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~h~~------~p~~~---~~ 454 (589)
+++|+||.|||... ..++++++.++++++++|++...++.. +.+.+.++.. +++..-.+ .|-.+ .+
T Consensus 69 ~~~~DlVilavK~~~--~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~ 145 (320)
T 3i83_A 69 ETKPDCTLLCIKVVE--GADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAY 145 (320)
T ss_dssp SSCCSEEEECCCCCT--TCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEecCCCC--hHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCC
Confidence 49999999998554 347889999999999999998888864 5566665533 44443211 11111 11
Q ss_pred eeeEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 007805 455 LLEIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (589)
Q Consensus 455 lveiv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~G 491 (589)
....+ ..+..+.+..+.+.+++...|..+.+..|.-+
T Consensus 146 ~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~ 183 (320)
T 3i83_A 146 GRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITT 183 (320)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHH
T ss_pred CEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHH
Confidence 11111 11233456788899999999988877676554
No 183
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.88 E-value=1.1e-09 Score=112.82 Aligned_cols=117 Identities=15% Similarity=0.028 Sum_probs=83.6
Q ss_pred ceEEEEcCCCCcHHHHHHHH-hCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
++|+|||+|.||.++|..+. ..|++|++||++++..+.+.+ .| +...+++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-----------LG-------------AERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-----------HT-------------CEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-----------cC-------------cEEeCCHHHHhc
Confidence 58999999999999999999 899999999998765443211 01 2233345 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC--CCHHHHhcccCCC-CcEEEecCCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 449 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~~~-~r~ig~h~~~p 449 (589)
+||+|++++|...+.+.-+.+++.+.++++++|++.+++ .....+.+.+... ....+.++|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987766555545667789999998765555 3345566655432 12357888873
No 184
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.86 E-value=2.6e-09 Score=109.43 Aligned_cols=118 Identities=13% Similarity=0.051 Sum_probs=82.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
-++|+|||+|.||.++|..++..|++|++||+++++.+.+. +.| +... ++ +.++
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~e~l~ 209 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQ-------------AEFV-STPELAA 209 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTT-------------CEEC-CHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcC-------------ceeC-CHHHHHh
Confidence 36899999999999999999999999999999876544321 111 2223 44 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC--CCHHHHhcccCC-CCcEEEecCCCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFSPA 450 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~~-~~r~ig~h~~~p~ 450 (589)
+||+|++++|...+.+.-+.+++.+.+++++++++.+++ .....+.+.+.. .....++++|.|.
T Consensus 210 ~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 210 QSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred hCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 999999999987654444435667789999988765554 333555555432 3345678887653
No 185
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.81 E-value=8.4e-09 Score=104.42 Aligned_cols=120 Identities=13% Similarity=0.219 Sum_probs=80.3
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
||+|||+|.||.++|..++..|+ +|+++|+++++++.....+...... . + ...+++.+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~--~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE-L--G---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH-H--T---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh-c--C---------CCeEEEECCCHHHhCCC
Confidence 69999999999999999998888 7999999988876422222211100 0 0 01245666778899999
Q ss_pred CEEEEe--------------ccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccC-----CCCcEEEe
Q 007805 389 DMVIEA--------------VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-----SQDRIIGA 444 (589)
Q Consensus 389 DlVIea--------------vpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~-----~~~r~ig~ 444 (589)
|+||++ +.++..+++++.+++.+++ |+++++..| -|+..+..... .+.|++|+
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t--NPv~~~t~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITT--NPVDAMTYVMYKKTGFPRERVIGF 140 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeC--CchHHHHHHHHHhcCCChhhEEEe
Confidence 999999 4445667889999999997 666443222 25544433322 14466664
No 186
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.80 E-value=1.3e-08 Score=103.34 Aligned_cols=105 Identities=20% Similarity=0.254 Sum_probs=73.2
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
|.++||+|||+|.||.++|..++..|+ +|++||+++++++.....+.+... +... ...+..++|+++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~-~~~~-----------~~~v~~t~d~~a 72 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSP-VDGF-----------DAKFTGANDYAA 72 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHH-HHTC-----------CCCEEEESSGGG
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhh-hcCC-----------CCEEEEeCCHHH
Confidence 456799999999999999999999999 999999999886543222222111 0000 124556678899
Q ss_pred CCCCCEEEEecc--C------------ChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 385 FKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 385 ~~~aDlVIeavp--e------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+++||+||.+.. . +..+.+++...+.+++ |+++++..|
T Consensus 73 ~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvt 124 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICIT 124 (324)
T ss_dssp GTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred HCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecC
Confidence 999999999973 2 2345566667788887 666654333
No 187
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.78 E-value=2.9e-09 Score=109.20 Aligned_cols=115 Identities=16% Similarity=0.058 Sum_probs=81.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
-++|+|||+|.||.++|..++..|++|++||++++. +.+. +.| +.. .++ +.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~~~l~ 203 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-----------ELN-------------AEF-KPLEDLLR 203 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HHC-------------CEE-CCHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-----------hcC-------------ccc-CCHHHHHh
Confidence 468999999999999999999999999999999876 3321 011 122 244 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccCC-CCcEEEecCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~-~~r~ig~h~~~ 448 (589)
+||+|++++|...+.+.-+.+++.+.+++++++++.+.+..++ .+.+.+.. .-...+.++|+
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~ 268 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFE 268 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCC
Confidence 9999999999877654433356677899999987666554443 45444432 23346788887
No 188
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.78 E-value=1.6e-08 Score=102.33 Aligned_cols=106 Identities=21% Similarity=0.254 Sum_probs=71.8
Q ss_pred CCccceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCCh--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 305 PRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 305 ~~~~~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
.+..+||+|||+|.||.++|..++..|+ +|+++|+++ ++++.....+.... .......++..+++
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~------------~~~~~~~~i~~t~d 72 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS------------PVQGFDANIIGTSD 72 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH------------HHHTCCCCEEEESC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh------------hhccCCCEEEEcCC
Confidence 3456799999999999999999999999 999999994 44332211121110 00011235666778
Q ss_pred ccCCCCCCEEEEecc--C------------ChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 382 YSEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 382 ~~~~~~aDlVIeavp--e------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
++++++||+||+++. . +..+.+++.+.+.+++ |+++++..|
T Consensus 73 ~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvs 127 (315)
T 3tl2_A 73 YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLT 127 (315)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECC
Confidence 899999999999972 2 2335567777788886 555554333
No 189
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.77 E-value=1.9e-08 Score=102.10 Aligned_cols=99 Identities=19% Similarity=0.243 Sum_probs=70.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCccC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 384 (589)
|+||+|||+|.||.++|..|+.+| ++|++||+++++++.....+..... ..+ ..+.. ++++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~-----------~~~~~~~~d~~~ 66 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLE-----------AHGNIVINDWAA 66 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSS-----------SCCEEEESCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcC-----------CCeEEEeCCHHH
Confidence 368999999999999999999999 7999999999887664332221110 000 11222 456688
Q ss_pred CCCCCEEEEeccCCh------------------HHHHHHHHHHHHhCCCCcEEEe
Q 007805 385 FKDVDMVIEAVIESV------------------PLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 385 ~~~aDlVIeavpe~~------------------~~k~~v~~~l~~~~~~~~ii~s 421 (589)
+++||+||+|++... .+++++.+++.++++ +++++.
T Consensus 67 ~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~ 120 (309)
T 1hyh_A 67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVV 120 (309)
T ss_dssp GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEE
T ss_pred hCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE
Confidence 999999999998533 245788888888875 555543
No 190
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.77 E-value=1.2e-08 Score=103.77 Aligned_cols=104 Identities=17% Similarity=0.329 Sum_probs=72.3
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
|.++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... .. + ....+..++++++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~-~~--~---------~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP-IE--G---------VDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH-HH--T---------CCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh-hc--C---------CCcEEEEcCCHHH
Confidence 456799999999999999999999988 999999999876532222221100 00 0 0123455677899
Q ss_pred CCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCcEEEec
Q 007805 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (589)
Q Consensus 385 ~~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (589)
+++||+||.+..- +..+.+++.+.+.+++ |+++++..
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv 121 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICI 121 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe
Confidence 9999999998632 3355667777788888 56655433
No 191
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.76 E-value=3.2e-09 Score=108.70 Aligned_cols=113 Identities=18% Similarity=0.118 Sum_probs=79.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++. +.+.+ .| +... ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-----------~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-----------LK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-----------cC-------------ceec-CHHHHHhh
Confidence 58999999999999999999999999999999875 32210 01 1222 44 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccCC-CCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~-~~r~ig~h~~~ 448 (589)
||+|++++|.+.+.+.-+-+++.+.++++ ++++.+.+..++ .+.+.+.. .....|.++|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999987655544444566778889 776555544333 34444433 23457889887
No 192
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.75 E-value=3.3e-09 Score=108.35 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=80.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++..+ | .....++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 5799999999999999999999999999999875311 1 1223455 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccCC-CCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS 448 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~-~~r~ig~h~~~ 448 (589)
||+|++++|...+.+.-+-++..+.+++++++++.+++..+ ..+.+.+.. ..+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999977655443334556678899998766665443 455555542 34567888876
No 193
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.75 E-value=1.1e-08 Score=103.78 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=75.7
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+..... .. ...++..++|+++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~----~~---------~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL----FL---------HTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG----GS---------CCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh----cc---------cCCeEEEcCCHHH
Confidence 56899999999999999999999997 999999999876654333332210 00 1235667788888
Q ss_pred CCCCCEEEEec--------------cCChHHHHHHHHHHHHhCCCCcEEEec
Q 007805 385 FKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATN 422 (589)
Q Consensus 385 ~~~aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (589)
+++||+||++. .++..+++++.+++.+++ |+++++..
T Consensus 87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvv 137 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELH 137 (330)
T ss_dssp CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeC
Confidence 99999999874 335577888888999995 56655433
No 194
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.74 E-value=1.2e-08 Score=107.74 Aligned_cols=108 Identities=16% Similarity=0.122 Sum_probs=75.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHh-CCCeEEEEe---CChHHHHHHHHHHHHHHHhhHhcCC-CC----HHHHHHHhhccc-
Q 007805 308 VRKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRGK-LT----QDKANNALKMLK- 377 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~-~G~~V~~~d---~~~~~~~~~~~~~~~~~~~~~~~g~-~~----~~~~~~~~~~i~- 377 (589)
++||+|||+|.||+++|..|++ +|++|++|| +++++++.+.+ +.|. +. +.+......++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 71 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG----------ADELTVIVNEKDGTQTEVKSRPKV 71 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT----------TSCEEEEEECSSSCEEEEEECCSE
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh----------hccceeeeecCCCccceeeccceE
Confidence 3589999999999999999988 599999999 77776665311 1110 00 000000012333
Q ss_pred ccCCc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC
Q 007805 378 GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (589)
Q Consensus 378 ~~~~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (589)
.++++ ++++++|+||+|||... ..++++++.++++++++|++++++..
T Consensus 72 ~~~~~~~a~~~aD~Vilav~~~~--~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVPAFA--HEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp EESCHHHHHTTCSEEEECSCGGG--HHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred EeCCHHHHhCCCCEEEEeCchHH--HHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 55666 56889999999999554 67899999999999999998655444
No 195
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.74 E-value=6.2e-09 Score=113.32 Aligned_cols=150 Identities=13% Similarity=0.084 Sum_probs=98.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
-++|+|||+|.||+++|..+...|++|++||++++. +.+. +.| +... ++ +.++
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g-------------~~~~-~l~e~~~ 195 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-----------QLG-------------IELL-SLDDLLA 195 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-----------HHT-------------CEEC-CHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHH-----------hcC-------------cEEc-CHHHHHh
Confidence 368999999999999999999999999999998642 2221 111 1122 44 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH--HhcccCCC------CcEEEecCC--CCCCCCCee
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI--VGEKTSSQ------DRIIGAHFF--SPAHVMPLL 456 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~--~~~~~~~~------~r~ig~h~~--~p~~~~~lv 456 (589)
+||+|+.|+|.....+.-+-+++.+.+++++++++.+++-.+++ +.+.+... -.|++.||. .|.+..+.+
T Consensus 196 ~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~v 275 (529)
T 1ygy_A 196 RADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQV 275 (529)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTE
T ss_pred cCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCE
Confidence 99999999996644333222346778999999987776655443 43444321 123444552 222344566
Q ss_pred eEecCCC-CCHHHHHH-----HHHHHHHcCCee
Q 007805 457 EIVRTER-TSAQVILD-----LMTVGKIIKKVP 483 (589)
Q Consensus 457 eiv~~~~-t~~e~~~~-----~~~l~~~lG~~~ 483 (589)
.++|+.. +++++.+. +..+.+.++..+
T Consensus 276 ilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 276 VVTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp EECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 7888877 77887765 666777776654
No 196
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.74 E-value=4.5e-08 Score=99.30 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=69.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.||.++|..|+.. |++|++||+++++++.....+.+... ......++..+++++.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP------------VGLFDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhh------------cccCCcEEEECCCHHHHC
Confidence 3799999999999999999985 79999999999877643211111100 000113466677887799
Q ss_pred CCCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCcEEEe
Q 007805 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 387 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~s 421 (589)
+||+||+|+|.. ..+.+++.+.+.+++ ++++++.
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv 116 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIV 116 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 999999999642 144567777888886 5554433
No 197
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.74 E-value=5.1e-08 Score=99.35 Aligned_cols=107 Identities=26% Similarity=0.364 Sum_probs=74.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
++||+|||+|.||+.+|..|+.+|+ +|+++|+++++++.....+.+.+ .. .+ ...+..+++.+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~~--~~----------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS-SF--YP----------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG-GG--ST----------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh-hh--cC----------CeEEEeCCCHHHh
Confidence 4689999999999999999999999 99999999877652111111110 00 00 0234444567788
Q ss_pred CCCCEEEEecc--C------------ChHHHHHHHHHHHHhCCCCcEEEecCCCCCH
Q 007805 386 KDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (589)
Q Consensus 386 ~~aDlVIeavp--e------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~ 428 (589)
++||+||++++ . +..++++++.++.++ .++++|++.+.++..
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 99999999993 2 235666888888887 577777766655544
No 198
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.72 E-value=2.7e-08 Score=103.06 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=73.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcc-cccCCc-cCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDY-SEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i-~~~~~~-~~~ 385 (589)
++||+|||+|.||+.+|..|+++|++|++||+++++++...+... ..+...... ....+ ..++++ +.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA----IIAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS----EEEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCC----eEEeccccc------cccccceecCCHHHHH
Confidence 468999999999999999999999999999999988776432100 000000000 00112 244565 457
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+++|+||+|+|... ..+++.++.+.++++++|++..
T Consensus 74 ~~~D~vi~~v~~~~--~~~~~~~l~~~l~~~~~vv~~~ 109 (359)
T 1bg6_A 74 KDADVILIVVPAIH--HASIAANIASYISEGQLIILNP 109 (359)
T ss_dssp TTCSEEEECSCGGG--HHHHHHHHGGGCCTTCEEEESS
T ss_pred hcCCEEEEeCCchH--HHHHHHHHHHhCCCCCEEEEcC
Confidence 89999999999655 4688899999999999777663
No 199
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.69 E-value=1.9e-08 Score=102.34 Aligned_cols=100 Identities=20% Similarity=0.266 Sum_probs=68.1
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
.++||+|||+|.||.++|..++..|. +|+++|+++++++.....+.... ...+. .-++. +++.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~---~~~~~---------~~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK---VFAPK---------PVDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHT---TSSSS---------CCEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHh---hhcCC---------CeEEE-cCcHHH
Confidence 45799999999999999999998875 89999999875443222221100 00000 01122 245588
Q ss_pred CCCCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCcEEE
Q 007805 385 FKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILA 420 (589)
Q Consensus 385 ~~~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ii~ 420 (589)
+++||+||++++ ++..+++++.+++.+++ |+++++
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~i 120 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFL 120 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEE
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEE
Confidence 999999999953 34478889999999997 555443
No 200
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.69 E-value=3.2e-09 Score=110.07 Aligned_cols=110 Identities=22% Similarity=0.166 Sum_probs=80.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC--------eEEEEeCChHHHHH-HHHHHHHHH--HhhHhcCCCCHHHHHHHhhcc
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEANV--RGLVTRGKLTQDKANNALKML 376 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~--------~V~~~d~~~~~~~~-~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~i 376 (589)
..||+|||+|.||++||..|+++|+ +|++|.++++...+ ..+.++..- .+++..-.+ ...+
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~L--------p~~i 105 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITL--------PDNL 105 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCC--------CSSE
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcC--------CCCc
Confidence 3589999999999999999999875 59999998763211 111111000 000111111 1467
Q ss_pred cccCCc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC
Q 007805 377 KGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (589)
Q Consensus 377 ~~~~~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (589)
.+++|+ +++++||+||.+|| .+..+.+++++.+++++++++++.++++.
T Consensus 106 ~~t~dl~~al~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 106 VANPDLIDSVKDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp EEESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred EEeCCHHHHHhcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEeccccc
Confidence 888888 77999999999999 66689999999999999999999988865
No 201
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.68 E-value=1.2e-08 Score=102.00 Aligned_cols=124 Identities=10% Similarity=-0.055 Sum_probs=86.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++..+. ....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------------------~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------------------------DVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------------------------SEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----------------------------ccccCChHHHhhc
Confidence 68999999999999999999999999999998653211 2233455 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccC-CCCcEEEecC-----CCCCCCCCeeeEe
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHF-----FSPAHVMPLLEIV 459 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~-~~~r~ig~h~-----~~p~~~~~lveiv 459 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-. ...+.+.+. ..-...+.-. .+|.+..+.+.++
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 9999999997666544444667788999999876665533 334544443 2223344433 3445556677788
Q ss_pred cC
Q 007805 460 RT 461 (589)
Q Consensus 460 ~~ 461 (589)
|+
T Consensus 254 PH 255 (290)
T 3gvx_A 254 PH 255 (290)
T ss_dssp CS
T ss_pred cc
Confidence 86
No 202
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.65 E-value=3e-08 Score=100.91 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=88.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeC-ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
++|+|||+|.||.++|..+...|++|++||+ +++.. .+. +.| +...+++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~-----------~~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEA-----------SYQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhh-----------hcC-------------cEEcCCHHHHHh
Confidence 6899999999999999999999999999999 87652 211 111 1223344 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC--CCHHHHhcccCCCCcEE--EecCC-------CCCCCCCe
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQDRII--GAHFF-------SPAHVMPL 455 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~~~~r~i--g~h~~-------~p~~~~~l 455 (589)
+||+|+.++|...+...-+-++..+.+++++++++.+++ +....+.+.+... ++. +...| .|.+..+.
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g-~i~gA~lDv~~~eP~~~~~L~~~~n 280 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAG-RLAYAGFDVFAGEPNINEGYYDLPN 280 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT-SEEEEEESCCTTTTSCCTTGGGCTT
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC-CCcEEEEeCCCCCCCCCChhhhCCC
Confidence 999999999976553332224566788999998876665 3334455544321 222 23333 22234456
Q ss_pred eeEecCCCC-CHHHHHHHH
Q 007805 456 LEIVRTERT-SAQVILDLM 473 (589)
Q Consensus 456 veiv~~~~t-~~e~~~~~~ 473 (589)
+.++|+... +.++...+.
T Consensus 281 viltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 281 TFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp EEECSSCTTCBHHHHHHHH
T ss_pred EEECCcCCcCcHHHHHHHH
Confidence 677776543 444444433
No 203
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.64 E-value=1e-07 Score=101.44 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=56.9
Q ss_pred cceEEEEcCCCC--cHHHHHHHHhC----CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 308 VRKVAVIGGGLM--GSGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 308 ~~kI~IIG~G~m--G~~iA~~l~~~----G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
.+||+|||+|.| |.++|..++.. |++|++||+++++++.+...... .+..... ..+++.++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~----~l~~~~~--------~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKK----YVEEVGA--------DLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHH----HHHHTTC--------CCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHH----HhccCCC--------CcEEEEECC
Confidence 368999999997 56667788754 88999999999998875443322 2221111 246778888
Q ss_pred c-cCCCCCCEEEEecc
Q 007805 382 Y-SEFKDVDMVIEAVI 396 (589)
Q Consensus 382 ~-~~~~~aDlVIeavp 396 (589)
+ +++++||+||+++|
T Consensus 71 ~~eal~dAD~VIiaag 86 (480)
T 1obb_A 71 LDDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 8 78999999999995
No 204
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.60 E-value=3.5e-09 Score=106.84 Aligned_cols=164 Identities=12% Similarity=0.018 Sum_probs=105.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC-CC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~-~~ 387 (589)
+||+|||+|.||+.+|..|+++|++|++|+++++.++.. ...|... ..+. .+..+.+ ++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~-----------~~~g~~~--------~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYY-----------TVPHAPA--------QDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEE-----------SSTTSCC--------EEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEE-----------ecCCeec--------ccee-cCchHhcCCC
Confidence 589999999999999999999999999999996543210 0112110 0111 1222444 89
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEec------CCCCCCCC-CeeeEec
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH------FFSPAHVM-PLLEIVR 460 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h------~~~p~~~~-~lveiv~ 460 (589)
+|+||.||| .....++++++.++++++++|++...++...+. ++. .++++.- ...|-... ....+..
T Consensus 63 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~~-~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVK--THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IPF-KNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSC--GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CCC-SCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCC--ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CCC-CcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998 445678889999999999999998888877654 222 2333321 11221110 0011111
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHH
Q 007805 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 501 (589)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~ 501 (589)
+ +.+..+.+.+++..-|..+.+..|.-+.....++.+.
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~ 174 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNL 174 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHH
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHH
Confidence 1 3456777888888888888777776665555544433
No 205
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.58 E-value=1.7e-07 Score=94.91 Aligned_cols=116 Identities=18% Similarity=0.063 Sum_probs=75.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
+||+|||+|.||+.+|..|+ +|++|++|++++++++...+ .|......-......+. .+.+.+.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~-----------~G~~~~~~~~~~~~~~~--~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQS-----------EGIRLYKGGEEFRADCS--ADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHH-----------HCEEEEETTEEEEECCE--EESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHh-----------CCceEecCCCeeccccc--ccccccCCC
Confidence 58999999999999999999 99999999999887665422 11000000000000011 112456789
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH-HHhcccCCCCcEEE
Q 007805 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIG 443 (589)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~-~~~~~~~~~~r~ig 443 (589)
|+||.||+ .....+++.++.+. ++++ |+|...++... .+.+.++. .++++
T Consensus 69 D~vilavK--~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~-~~vl~ 119 (307)
T 3ego_A 69 DLLVVTVK--QHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVG-HSIYV 119 (307)
T ss_dssp SEEEECCC--GGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCS-CEEEE
T ss_pred CEEEEEeC--HHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCC-CcEEE
Confidence 99999997 44466777877764 6777 77888888875 45544443 34433
No 206
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.57 E-value=1.9e-07 Score=93.51 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=69.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+....+ + ....+..++|.++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~---~---------~~~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT---T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc---C---------CCCEEEEeCCHHHhC
Confidence 489999999999999999999998 99999999988663222222211100 0 012456666788999
Q ss_pred CCCEEEEeccC--C------------hHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 387 DVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 387 ~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+||+||.+..- + ..+.+++.+++.+++ |+++++..|
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs 118 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT 118 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC
Confidence 99999998732 1 233445556677775 566665444
No 207
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.55 E-value=6.7e-08 Score=99.22 Aligned_cols=138 Identities=13% Similarity=0.080 Sum_probs=89.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||+++...+.+.+ . .+...+++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-----------T-------------GAKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-----------H-------------CCEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-----------C-------------CCeEcCCHHHHHhc
Confidence 68999999999999999999999999999998644333211 0 12334455 66899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCCCCcEE--EecCC--CC------CCCCCe
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRII--GAHFF--SP------AHVMPL 455 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~i--g~h~~--~p------~~~~~l 455 (589)
||+|+.++|-..+.+.-+-++..+.++++++++..+.+-. -..+.+.+... ++. +.--| .| .+..+.
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g-~i~ga~lDV~~~EP~~~~~pL~~~~n 299 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESG-HIGGYSGDVWDPQPAPKDHPWRYMPN 299 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT-SEEEEEESCCSSSSCCTTCGGGTSTT
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhC-CccEEEeCCCCCCCCCCCChhhcCCC
Confidence 9999999997665544444667778999999876555433 33455544322 222 33222 22 234455
Q ss_pred eeEecCC-CCCHHHHHH
Q 007805 456 LEIVRTE-RTSAQVILD 471 (589)
Q Consensus 456 veiv~~~-~t~~e~~~~ 471 (589)
+.++|+- ..+.++..+
T Consensus 300 vilTPHia~~t~ea~~~ 316 (351)
T 3jtm_A 300 QAMTPHTSGTTIDAQLR 316 (351)
T ss_dssp BCCCCSCGGGSHHHHHH
T ss_pred EEECCcCCCCCHHHHHH
Confidence 6677763 345554444
No 208
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.54 E-value=2.6e-07 Score=93.12 Aligned_cols=134 Identities=10% Similarity=0.005 Sum_probs=87.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
-++|+|||+|.||.++|..+...|++|++||++++ +. + .....++ +.++
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~ 173 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALR 173 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHT
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHh
Confidence 36899999999999999999999999999999864 10 0 1112344 5688
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC-CCCcEEEecCC---CCC------CCCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF---SPA------HVMP 454 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~---~p~------~~~~ 454 (589)
+||+|+.++|...+.+.-+-++..+.++++++++..+++-.++ .+.+.+. ..-.-.+..-| .|. +..+
T Consensus 174 ~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~ 253 (303)
T 1qp8_A 174 EARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLP 253 (303)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTST
T ss_pred hCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCC
Confidence 9999999999776544333346777899999987666653332 3444443 22233455555 332 2345
Q ss_pred eeeEecCCCC---CHHHHHH
Q 007805 455 LLEIVRTERT---SAQVILD 471 (589)
Q Consensus 455 lveiv~~~~t---~~e~~~~ 471 (589)
.+.++|+... ++++.+.
T Consensus 254 nviltPH~~~~~~t~e~~~~ 273 (303)
T 1qp8_A 254 NVVATPWVAGGYGNERVWRQ 273 (303)
T ss_dssp TEEECCSCSSSSSCHHHHHH
T ss_pred CEEECCCcCCCCCCHHHHHH
Confidence 6667776543 4555433
No 209
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.53 E-value=1e-07 Score=96.74 Aligned_cols=128 Identities=10% Similarity=0.035 Sum_probs=85.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||+++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 689999999999999999999999999999986542210 011112344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--CHHHHhcccCC-CCcEEEecCCC--------CCCCCCee
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSS-QDRIIGAHFFS--------PAHVMPLL 456 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~~-~~r~ig~h~~~--------p~~~~~lv 456 (589)
||+|+.++|-..+.+.-+-++..+.++++++++..+.+- .-..+.+.+.. .-...+.-.|. |.+..+.+
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 271 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDV 271 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSE
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCE
Confidence 999999999777665545566777899999987665543 33455555432 22334443332 22344566
Q ss_pred eEecCC
Q 007805 457 EIVRTE 462 (589)
Q Consensus 457 eiv~~~ 462 (589)
.++|+-
T Consensus 272 ilTPHi 277 (324)
T 3evt_A 272 LITPHI 277 (324)
T ss_dssp EECCSC
T ss_pred EEcCcc
Confidence 677753
No 210
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.52 E-value=3.2e-08 Score=100.05 Aligned_cols=138 Identities=16% Similarity=0.086 Sum_probs=86.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++. +.+ .+.| +... ++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~-~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERA-----------KEVN-------------GKFV-DLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH-----------HHTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhH-----------hhcC-------------cccc-CHHHHHhh
Confidence 68999999999999999999999999999999865 222 1111 1121 34 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccC-CCCcEEEecCCC--------CCCCCCee
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS--------PAHVMPLL 456 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~--------p~~~~~lv 456 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+ ..+.+.+. ..-.-.+...|. |.+..+.+
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nv 276 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNV 276 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTE
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCE
Confidence 99999999976654332224566778999998876665333 34444432 122223333322 22344566
Q ss_pred eEecCCCC-CHHHHHHH
Q 007805 457 EIVRTERT-SAQVILDL 472 (589)
Q Consensus 457 eiv~~~~t-~~e~~~~~ 472 (589)
.++|+... +.++...+
T Consensus 277 iltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 277 VLTPHIGASTVEAQERA 293 (307)
T ss_dssp EECSSCTTCBHHHHHHH
T ss_pred EECCccccCcHHHHHHH
Confidence 77776543 44444333
No 211
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.50 E-value=8.8e-08 Score=97.81 Aligned_cols=99 Identities=15% Similarity=0.095 Sum_probs=62.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|++||++++.. . ......++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~-------------~~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------V-------------DWIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------S-------------CCEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------c-------------CceecCCHHHHHhc
Confidence 689999999999999999999999999999986531 0 11223445 66889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhcccC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS 436 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~ 436 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.++ .+.+.+.
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC-------------
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 999999999777665555577778899999988666554443 3444443
No 212
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.49 E-value=7.6e-08 Score=97.61 Aligned_cols=103 Identities=12% Similarity=0.095 Sum_probs=71.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
=++|+|||+|.||.++|..+...|++|++||++++... + .+.| +.. .++ +.++
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-----------~~~g-------------~~~-~~l~ell~ 195 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-A-----------EKIN-------------AKA-VSLEELLK 195 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-H-----------HHTT-------------CEE-CCHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-H-----------HhcC-------------cee-cCHHHHHh
Confidence 36899999999999999999999999999999986532 1 1111 111 244 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~ 436 (589)
+||+|+.++|...+...-+-++..+.+++++++++.+++-.+ ..+.+.+.
T Consensus 196 ~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 196 NSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp HCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred hCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 999999999966643322224556678999998876665333 34555543
No 213
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.48 E-value=7.8e-07 Score=83.77 Aligned_cols=137 Identities=21% Similarity=0.219 Sum_probs=99.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.++..+.+.+...|..++.++..+.|+|.=. |.|+++. ....++ +.+...++||++.+.
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~----------------~~~~I~-~~i~~~~~~V~t~~~ 93 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYIN----SPGGSVT----------------AGFAIY-DTIQHIKPDVQTICI 93 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEe----CCCCCHH----------------HHHHHH-HHHHHhcCCcEEEEe
Confidence 4889999999999999987766676666321 1223321 122455 678889999999999
Q ss_pred CcccchhhHHhhhcC--EEEEeCCceEeccccccCCCCChhhhh------------------hHhhhc--CHHHHHHHHH
Q 007805 107 GLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRLV--GLSKAIEMML 164 (589)
Q Consensus 107 G~a~GgG~~lala~D--~~ia~~~a~~~~pe~~~Gl~p~~g~~~------------------~l~~~~--G~~~a~~l~l 164 (589)
|.|.++|..++++|| .|++.++++|.+....-|. .|-.. .+.+.- ......+++-
T Consensus 94 G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~ 170 (203)
T 3qwd_A 94 GMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA---QGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTD 170 (203)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSST---TTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHT
T ss_pred eeehhHHHHHHHcCCcCeEEEcCCceEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 999999999999999 6999999999876554321 11110 112222 3455666777
Q ss_pred cCCCCCHHHHHHcCCcceecCch
Q 007805 165 LSKSITSEEGWKLGLIDAVVTSE 187 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~~ 187 (589)
....++|+||+++||||+|++..
T Consensus 171 ~d~~lta~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 171 RDNFLTAEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp SCCCEEHHHHHHHTSCSEECCCC
T ss_pred cCceecHHHHHHcCCcCEecCCc
Confidence 77889999999999999998654
No 214
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.47 E-value=1.1e-06 Score=93.09 Aligned_cols=201 Identities=17% Similarity=0.193 Sum_probs=146.0
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC---C-----------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEcCCCCCcCCCC
Q 007805 3 APRVTMEVG-NDGVAIITLINPP---V-----------NALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGNGGRFSGGFD 66 (589)
Q Consensus 3 ~~~~~~~~~-~~~v~~i~l~~p~---~-----------N~l~~~~~~~l~~~l~~~~-~~~~v~~vvl~g~g~~F~aG~D 66 (589)
|+.+...++ ..+++.++...|. . +.+...|-.||.+++..+. +++++...++...|+.
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~------ 338 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA------ 338 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH------
Confidence 455555554 4568888888762 1 4455678899977777766 6788999998776643
Q ss_pred chhhhhc-------cCCCcccccchhHHHHHHHHHHhCCCcEEEEe-CCcccchh-hHHhhhcCEEEEeC-------Cce
Q 007805 67 INVFQKV-------HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV-EGLALGGG-LELAMGCHARIAAP-------KTQ 130 (589)
Q Consensus 67 l~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav-~G~a~GgG-~~lala~D~~ia~~-------~a~ 130 (589)
..+... .......+...+..+.+ .++--...-++|.| .|.|+.|- +||+++||..++-+ .+.
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (556)
T 2w3p_A 339 -RHLLAADASLMQHKDHWFVRETIGLLRRTL-ARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPA 416 (556)
T ss_dssp -HHHHHHHHHHHHTTTSHHHHHHHHHHHHHH-HHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCC
T ss_pred -HHHhhhHHHHHhccchHHHHHHHHHHHHHH-HHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCce
Confidence 322211 01111222233344555 55777888899988 68997776 49999999999962 378
Q ss_pred EeccccccCCCCChhhhhhHhhhc-CHHHHHH--HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcChhh
Q 007805 131 LGLPELTLGVIPGFGGTQRLPRLV-GLSKAIE--MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207 (589)
Q Consensus 131 ~~~pe~~~Gl~p~~g~~~~l~~~~-G~~~a~~--l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~ 207 (589)
+.+.+.++|..|-..+..||.++. |.....+ -...|+++++++|.++|||+...++-+.+++.+-..++-++.||.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (556)
T 2w3p_A 417 ITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDA 496 (556)
T ss_dssp EECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHH
T ss_pred eEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcch
Confidence 999999999999888888887664 4333332 2346999999999999999999888899999999999999999987
Q ss_pred hhhh
Q 007805 208 IRSL 211 (589)
Q Consensus 208 ~~~~ 211 (589)
+..+
T Consensus 497 ~~~~ 500 (556)
T 2w3p_A 497 LTGL 500 (556)
T ss_dssp HHHH
T ss_pred hccc
Confidence 6543
No 215
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.46 E-value=5e-08 Score=99.65 Aligned_cols=101 Identities=9% Similarity=0.016 Sum_probs=72.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++.. .+ .+.| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-----------~~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VS-----------ASFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HH-----------HHTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hh-----------hhcC-------------cee-CCHHHHHhc
Confidence 689999999999999999999999999999987642 21 1111 111 244 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH--HHhccc
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 435 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~ 435 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.++ .+.+.+
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL 269 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRAL 269 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHH
Confidence 999999999776544433356677899999987666654433 444444
No 216
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.46 E-value=3.4e-07 Score=92.54 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=66.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.-...+..... ..... ..+..++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~~~-----------~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSP-IHGFD-----------TRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHH-HHTCC-----------CEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccc-ccCCC-----------cEEEECCCHHHhC
Confidence 489999999999999999999887 999999999876542222222110 00000 1234456679999
Q ss_pred CCCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 387 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+||+||.+.+-. ..+.+++.+.+.+++ |+++++..|
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt 118 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVA 118 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecC
Confidence 999999987431 223345555667765 566555433
No 217
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.45 E-value=2.1e-07 Score=95.64 Aligned_cols=137 Identities=9% Similarity=0.026 Sum_probs=87.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|++||+++.. +.+ .+.| +...+++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RADG-------------FAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------HhcC-------------ceEeCCHHHHHhh
Confidence 68999999999999999999999999999998532 221 1111 2334455 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccC-CCCcEEEecCC--------CCCCCCCee
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFF--------SPAHVMPLL 456 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~--------~p~~~~~lv 456 (589)
||+|+.++|-..+.+.-+-.+..+.++++++++..+.+-.+ ..+.+.+. ..-...+.--| +|.+..+.+
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 295 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENC 295 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTE
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCE
Confidence 99999999977665544445677789999998765554332 34444432 12222333322 222344566
Q ss_pred eEecCCC-CCHHHHH
Q 007805 457 EIVRTER-TSAQVIL 470 (589)
Q Consensus 457 eiv~~~~-t~~e~~~ 470 (589)
.++|+-. .++++.+
T Consensus 296 ilTPHia~~t~e~~~ 310 (352)
T 3gg9_A 296 ICTPHIGYVERESYE 310 (352)
T ss_dssp EECCSCTTCBHHHHH
T ss_pred EECCCCCCCCHHHHH
Confidence 6777543 3444433
No 218
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.45 E-value=5.9e-07 Score=85.57 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=94.8
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.++..+.+.+.+.|..++.++. +.|+|.=. |.|+++. ....++ +.|...++||++.+.
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~IN----SPGGsv~----------------a~~~I~-~~i~~~~~pV~t~v~ 104 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYIN----SPGGSIN----------------EGLAIL-DIFNYIKSDIQTISF 104 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEe
Confidence 4788889999999998876555 76666421 1123221 122455 678889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeccccccCCCC---Chhhh----h--------hHhhh--cCHHHHHHHHHcCC
Q 007805 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GFGGT----Q--------RLPRL--VGLSKAIEMMLLSK 167 (589)
Q Consensus 107 G~a~GgG~~lala~D~--~ia~~~a~~~~pe~~~Gl~p---~~g~~----~--------~l~~~--~G~~~a~~l~ltg~ 167 (589)
|.|..+|.-++++||. |++.+++.+++.....|... +.... . .+.+. .......+++-.+.
T Consensus 105 g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~ 184 (215)
T 2f6i_A 105 GLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDY 184 (215)
T ss_dssp EEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred eEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCe
Confidence 9999999999999999 99999999987665433210 00000 0 01111 23445556665667
Q ss_pred CCCHHHHHHcCCcceecCc
Q 007805 168 SITSEEGWKLGLIDAVVTS 186 (589)
Q Consensus 168 ~~~a~~A~~~Glv~~vv~~ 186 (589)
.++++||+++||||++.+.
T Consensus 185 ~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 185 YMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp EECHHHHHHHTSCSEECCC
T ss_pred ecCHHHHHHCCCCCEecCC
Confidence 7899999999999999854
No 219
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.44 E-value=4.2e-07 Score=85.37 Aligned_cols=136 Identities=17% Similarity=0.159 Sum_probs=96.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.++..+.+.+.+.|..++.++..+.|+|.=. |.|+++. ....++ +.|..+++||++.+.
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~----------------a~~~I~-~~i~~~~~pV~~~v~ 92 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYIN----SPGGVIT----------------AGMSIY-DTMQFIKPDVSTICM 92 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CcCCCHH----------------HHHHHH-HHHHhcCCCEEEEEe
Confidence 4788999999999999987766787777422 1223221 122455 678889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeccccccCCCCChhhh-h-----------------hHhhhcC--HHHHHHHHH
Q 007805 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRLVG--LSKAIEMML 164 (589)
Q Consensus 107 G~a~GgG~~lala~D~--~ia~~~a~~~~pe~~~Gl~p~~g~~-~-----------------~l~~~~G--~~~a~~l~l 164 (589)
|.|..+|.-++++||. |++.+++.++.....-|. .|-. . .+.+..| .....+++-
T Consensus 93 g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~ 169 (193)
T 1yg6_A 93 GQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 169 (193)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTS
T ss_pred eeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Confidence 9999999999999999 999999998875544221 1110 0 1122223 344455555
Q ss_pred cCCCCCHHHHHHcCCcceecCc
Q 007805 165 LSKSITSEEGWKLGLIDAVVTS 186 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~ 186 (589)
.+..++++||+++||||++.++
T Consensus 170 ~~~~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 170 RDRFLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp SCEEEEHHHHHHHTSSSEECCC
T ss_pred CCeEEcHHHHHHcCCCCEecCC
Confidence 5667899999999999999864
No 220
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.44 E-value=4.6e-07 Score=94.51 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=84.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||+++|..+...|++|++||+++... . .......++ +.+++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----------------~------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----------------Y------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----------------B------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----------------c------------cCcEecCCHHHHHhh
Confidence 689999999999999999999999999999874310 0 011223445 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCCCCcEE--Eec-C-C----------CCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRII--GAH-F-F----------SPAH 451 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~i--g~h-~-~----------~p~~ 451 (589)
||+|+.++|...+.+.-+-++....++++++++..+.+-. ...+.+.+... ++. +.- | . +|.+
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g-~i~gAalDVf~~EP~~~~~~~~~pL~ 287 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEG-HLAGAAIDVFPVEPASNGERFSTPLQ 287 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT-SEEEEEECCCSSCCSSTTSCCCCTTT
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC-CccEEEeCCCCCCCCCcccccchhHh
Confidence 9999999997766554444566778999999876665533 34555555332 222 232 1 1 2334
Q ss_pred CCCeeeEecCC-CCCHHHHH
Q 007805 452 VMPLLEIVRTE-RTSAQVIL 470 (589)
Q Consensus 452 ~~~lveiv~~~-~t~~e~~~ 470 (589)
..+.+.++|+- ..++|+.+
T Consensus 288 ~~~nvilTPHig~~T~ea~~ 307 (416)
T 3k5p_A 288 GLENVILTPHIGGSTEEAQE 307 (416)
T ss_dssp TCTTEEECCSCTTCCHHHHH
T ss_pred cCCCEEECCCCCCCCHHHHH
Confidence 45667888873 34555443
No 221
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.43 E-value=1.1e-07 Score=96.39 Aligned_cols=128 Identities=14% Similarity=0.115 Sum_probs=83.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 689999999999999999999999999999986422110 011112344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccCC-CCcEEEecCC--------CCCCCCCee
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF--------SPAHVMPLL 456 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~-~~r~ig~h~~--------~p~~~~~lv 456 (589)
||+|+.++|-..+...-+-.+..+.++++++++..+.+-.+ ..+.+.+.. .-...+.--| +|.+..+.+
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nv 274 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNL 274 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTE
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCE
Confidence 99999999966554433334556678999998766655333 345554432 2222333322 233445667
Q ss_pred eEecCC
Q 007805 457 EIVRTE 462 (589)
Q Consensus 457 eiv~~~ 462 (589)
.++|+-
T Consensus 275 ilTPHi 280 (324)
T 3hg7_A 275 IITPHN 280 (324)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 788753
No 222
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.42 E-value=7.9e-08 Score=99.96 Aligned_cols=130 Identities=12% Similarity=0.034 Sum_probs=83.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++..+.+. +.| +....++ +.+++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-----------~~G-------------~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------------LTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-----------hcC-------------ceecCCHHHHHhc
Confidence 5899999999999999999999999999999865433211 111 1222344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccCCCCcEE--EecCCC--------CCCCCCe
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRII--GAHFFS--------PAHVMPL 455 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~~~r~i--g~h~~~--------p~~~~~l 455 (589)
||+|+.++|-..+.+.-+-++..+.++++++++..+.+-.+ ..+.+.+... ++- ++..|. |.+..+.
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~pL~~~~n 326 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG-RLAGYAGDVWFPQPAPKDHPWRTMPY 326 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT-SEEEEEESCCSSSSCCTTCGGGTSTT
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC-CeeEEEEEecCCCCCCCCChhHcCCC
Confidence 99999999966554332225666788999998866665333 3455554322 222 233222 2234456
Q ss_pred eeEecCCC
Q 007805 456 LEIVRTER 463 (589)
Q Consensus 456 veiv~~~~ 463 (589)
+.++|+..
T Consensus 327 vilTPHia 334 (393)
T 2nac_A 327 NGMTPHIS 334 (393)
T ss_dssp BCCCCSCT
T ss_pred EEECCCCC
Confidence 66777643
No 223
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.42 E-value=5e-07 Score=95.43 Aligned_cols=72 Identities=21% Similarity=0.241 Sum_probs=55.7
Q ss_pred ceEEEEcCCCC--cHHHHHHHHh----CCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 309 RKVAVIGGGLM--GSGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 309 ~kI~IIG~G~m--G~~iA~~l~~----~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
.||+|||+|.| |.+|+..++. .| +|++||++++++++... +.+ .... ...++++++|+
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~~----~l~~----------~~~~I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IGN----HSGN----------GRWRYEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HHT----TSTT----------SCEEEEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HHH----HHhc----------cCCeEEEECCH
Confidence 58999999998 5799988886 57 99999999998877532 111 1111 22568889998
Q ss_pred -cCCCCCCEEEEecc
Q 007805 383 -SEFKDVDMVIEAVI 396 (589)
Q Consensus 383 -~~~~~aDlVIeavp 396 (589)
+++++||+||++++
T Consensus 70 ~eAl~dADfVI~air 84 (450)
T 3fef_A 70 KKALSAADIVIISIL 84 (450)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhcCCCEEEeccc
Confidence 78999999999995
No 224
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.41 E-value=8.3e-07 Score=94.57 Aligned_cols=77 Identities=17% Similarity=0.098 Sum_probs=55.9
Q ss_pred ceEEEEcCCCC-cHHHHHHHHhC-----CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 309 ~kI~IIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
+||+|||+|.+ |.++|..|+.. +.+|++||+++++++.... +...+.... + ...++..++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~-~~~~~l~~~--~---------~~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAG-ACDVFIREK--A---------PDIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHH-HHHHHHHHH--C---------TTSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHH-HHHHHhccC--C---------CCCEEEEECCH
Confidence 49999999998 55578788887 6689999999998777532 222111001 1 11357778887
Q ss_pred -cCCCCCCEEEEeccC
Q 007805 383 -SEFKDVDMVIEAVIE 397 (589)
Q Consensus 383 -~~~~~aDlVIeavpe 397 (589)
+++++||+||.++|.
T Consensus 97 ~eal~~AD~VViaag~ 112 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRV 112 (472)
T ss_dssp HHHHSSCSEEEECCCT
T ss_pred HHHHcCCCEEEEcCCC
Confidence 789999999999975
No 225
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.41 E-value=4.5e-07 Score=92.22 Aligned_cols=104 Identities=19% Similarity=0.254 Sum_probs=71.3
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (589)
...+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.... ... ....+..++|++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~----~~~---------~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS----LFL---------KTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG----GGC---------SCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh----hcc---------CCCeEEEcCCHH
Confidence 456899999999999999999999997 89999999877665333222110 000 012345567888
Q ss_pred CCCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 384 EFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 384 ~~~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
++++||+||.+. |. +..+.+++.+.+.+++ |+++++..|
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvvt 136 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIVS 136 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 899999999886 22 2245556667788885 555554333
No 226
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.41 E-value=4.9e-07 Score=91.87 Aligned_cols=102 Identities=27% Similarity=0.328 Sum_probs=68.3
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccc-ccCCcc
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYS 383 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~~ 383 (589)
..+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+..... +.. ..+. .+++++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~-------------~~v~i~~~~~~ 69 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAP-------------QPVKTSYGTYE 69 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSS-------------SCCEEEEECGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-ccc-------------CCeEEEeCcHH
Confidence 45789999999999999999999987 999999998877653333322110 000 1112 244568
Q ss_pred CCCCCCEEEEeccC--C------------hHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 384 EFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 384 ~~~~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
++++||+||.++.. + ..+.+++.+.+.+++ |+++++..|
T Consensus 70 a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvvt 122 (326)
T 3pqe_A 70 DCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG-FDGIFLVAT 122 (326)
T ss_dssp GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred HhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcC
Confidence 89999999998732 1 133445556677776 466655443
No 227
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.39 E-value=3.2e-07 Score=96.03 Aligned_cols=126 Identities=15% Similarity=0.161 Sum_probs=83.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||+.+|..+...|++|+.||+++... .+ ......++ +.+++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~~------------~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----------------LG------------NATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------CT------------TCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----------------cC------------CceecCCHHHHHhc
Confidence 689999999999999999999999999999975320 01 12233345 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccCCCCcEE--E-----ecCC-------CCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRII--G-----AHFF-------SPAH 451 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~~~r~i--g-----~h~~-------~p~~ 451 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.+ ..+.+.+... ++. + .+|. +|.+
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g-~i~gA~lDVf~~EP~~~~~~~~~pL~ 276 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASK-HLAGAAIDVFPTEPATNSDPFTSPLA 276 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTT-SEEEEEEEC---------CTTTGGGT
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcC-CccEEEEeecCCCCCCccccccchhh
Confidence 99999999987665543335566789999998766555433 3455544321 221 2 2221 2334
Q ss_pred CCCeeeEecCCC
Q 007805 452 VMPLLEIVRTER 463 (589)
Q Consensus 452 ~~~lveiv~~~~ 463 (589)
..+.+.++|+-.
T Consensus 277 ~~~nvilTPHi~ 288 (404)
T 1sc6_A 277 EFDNVLLTPHIG 288 (404)
T ss_dssp TCTTEEEECCCS
T ss_pred cCCCEEECCCCC
Confidence 567788888654
No 228
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.38 E-value=3.3e-07 Score=93.70 Aligned_cols=101 Identities=14% Similarity=0.005 Sum_probs=73.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|+.||+++...+.. ......+++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~g~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE--------------------------EGAIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH--------------------------TTCEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh--------------------------cCCeEeCCHHHHHhh
Confidence 689999999999999999999999999999986432221 012333455 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhccc
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~ 435 (589)
||+|+.++|-..+...-+-++..+.++++++++..+.+-. -..+.+.+
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 277 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEAL 277 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 9999999997766554444667778999999876555433 34455544
No 229
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.37 E-value=1.5e-07 Score=95.32 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=84.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
-++|+|||+|.||.++|..+...|++|++||++++..+ +. ..++ +.++
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~ 192 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLK 192 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHh
Confidence 36899999999999999999999999999999865311 11 1233 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH--HHHhcccCCCCcEEEecCCC--C------CCCCCee
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFS--P------AHVMPLL 456 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~~~r~ig~h~~~--p------~~~~~lv 456 (589)
+||+|+.++|...+...-+-++..+.++++++++..+++-.+ ..+.+.+...-.-.+...|. | .+..+.+
T Consensus 193 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~~~L~~~~nv 272 (311)
T 2cuk_A 193 EADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPGHPLYALPNA 272 (311)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTTSGGGGCTTE
T ss_pred hCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCCChhhhCCCE
Confidence 899999999976544332223455678999998866665333 34555554111223333332 2 2344666
Q ss_pred eEecCCCC-CHHHH
Q 007805 457 EIVRTERT-SAQVI 469 (589)
Q Consensus 457 eiv~~~~t-~~e~~ 469 (589)
.++|+... +.++.
T Consensus 273 iltPh~~~~t~~~~ 286 (311)
T 2cuk_A 273 VITPHIGSAGRTTR 286 (311)
T ss_dssp EECCSCTTCBHHHH
T ss_pred EECCcCCCCCHHHH
Confidence 77776543 34443
No 230
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.37 E-value=2.1e-07 Score=95.42 Aligned_cols=102 Identities=14% Similarity=0.031 Sum_probs=70.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||..+|..+...|++|++||++++... . . ..| +....++ +.+++
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-~----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-E-R----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-H-H----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-H-h----------hcC-------------CeecCCHHHHHhc
Confidence 5799999999999999999999999999998765311 1 0 001 1222344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhccc
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~ 435 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+++-. ...+.+.+
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 273 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQAL 273 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHH
Confidence 9999999997655433333556678899998886666533 33454444
No 231
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.36 E-value=6.9e-07 Score=91.91 Aligned_cols=138 Identities=8% Similarity=0.038 Sum_probs=87.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|+.||+++.. +.+ .+.| +.. .++ +.+++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-----------~~~g-------------~~~-~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-----------EENG-------------VEP-ASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-----------HHTT-------------CEE-CCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-----------hhcC-------------eee-CCHHHHHhc
Confidence 68999999999999999999899999999998532 111 1111 111 244 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--CHHHHhcccCCCCcEEEecCC--C------CCCCCCeee
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQDRIIGAHFF--S------PAHVMPLLE 457 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~~~~r~ig~h~~--~------p~~~~~lve 457 (589)
||+|+.++|-..+.+.-+-.+..+.++++++++..+.+- .-..+.+.+....--.+.--| . |.+..+.+.
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvi 310 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFI 310 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEE
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEE
Confidence 999999999777665555467778899999987655543 334455554432111333322 2 223456677
Q ss_pred EecCCC-CCHHHHHHH
Q 007805 458 IVRTER-TSAQVILDL 472 (589)
Q Consensus 458 iv~~~~-t~~e~~~~~ 472 (589)
++|+-. .+.++.+.+
T Consensus 311 lTPHia~~t~e~~~~~ 326 (365)
T 4hy3_A 311 RSAHRAGALDSAFKKM 326 (365)
T ss_dssp ECCSCSSCCHHHHHHH
T ss_pred ECCccccCHHHHHHHH
Confidence 888643 345544433
No 232
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.34 E-value=1.4e-06 Score=85.55 Aligned_cols=139 Identities=15% Similarity=0.141 Sum_probs=96.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.++..+.+.+...|..++.++..+.|+|.=. |-|+++. ....++ +.|...++||++.+.
T Consensus 90 ~I~d~~a~~iiaqL~~l~~ed~~k~I~L~IN----SPGGsV~----------------ag~aIy-d~I~~~k~pV~t~v~ 148 (277)
T 1tg6_A 90 PIDDSVASLVIAQLLFLQSESNKKPIHMYIN----SPGGVVT----------------AGLAIY-DTMQYILNPICTWCV 148 (277)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSCSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEc
Confidence 4888899999999998876555677777422 1222221 123455 678889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeccccccCCCCChhhhh---------------hHhhhc--CHHHHHHHHHcCC
Q 007805 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ---------------RLPRLV--GLSKAIEMMLLSK 167 (589)
Q Consensus 107 G~a~GgG~~lala~D~--~ia~~~a~~~~pe~~~Gl~p~~g~~~---------------~l~~~~--G~~~a~~l~ltg~ 167 (589)
|.|..+|.-|+++||. |++.++++++.....-|......-.. .+.+.- ......+++-.+.
T Consensus 149 G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~ 228 (277)
T 1tg6_A 149 GQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDR 228 (277)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCE
T ss_pred cEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCc
Confidence 9999999999999999 99999999887655333211000000 011111 2344556665667
Q ss_pred CCCHHHHHHcCCcceecCc
Q 007805 168 SITSEEGWKLGLIDAVVTS 186 (589)
Q Consensus 168 ~~~a~~A~~~Glv~~vv~~ 186 (589)
.++++||+++||||+|...
T Consensus 229 ~lta~EAle~GLID~I~~~ 247 (277)
T 1tg6_A 229 YMSPMEAQEFGILDKVLVH 247 (277)
T ss_dssp EECHHHHHHHTSCSEECSS
T ss_pred ccCHHHHHHCCCCCEecCc
Confidence 7899999999999999854
No 233
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.33 E-value=1.8e-07 Score=95.34 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=73.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
=++|||||+|.||+++|..+...|++|++||+++...+.+.. .| +... ++ +.++
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~-~l~ell~ 199 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------LG-------------LRQV-ACSELFA 199 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------HT-------------EEEC-CHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------cC-------------ceeC-CHHHHHh
Confidence 368999999999999999999999999999998743322211 01 1222 34 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhccc
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~ 435 (589)
+||+|+.++|-..+...-+-++..+.++++++++..+.+-. ...+.+.+
T Consensus 200 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 250 (330)
T 4e5n_A 200 SSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAAL 250 (330)
T ss_dssp HCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred hCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999997666554444677788999999876665533 33454444
No 234
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.32 E-value=1e-07 Score=96.40 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=71.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||+++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 689999999999999999999999999999987532110 000011233 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhccc
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~ 435 (589)
||+|+.++|-..+.+.-+-++..+.++++++++..+.+-. -..+.+.+
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL 243 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAAL 243 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHH
Confidence 9999999997766554444667778999999876655433 34455544
No 235
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.31 E-value=1.6e-07 Score=95.99 Aligned_cols=101 Identities=19% Similarity=0.130 Sum_probs=73.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|++||++++.... +.| .... ++ +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceec-CHHHHHhh
Confidence 68999999999999999999999999999998765321 111 1222 24 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--CHHHHhcccC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~ 436 (589)
||+|+.++|-..+...-+-++..+.++++++++..+.+- .-..+.+.+.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 999999999766655545566777899999987655543 3345555553
No 236
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.27 E-value=2.7e-06 Score=86.34 Aligned_cols=109 Identities=20% Similarity=0.270 Sum_probs=70.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
.+||+|||+|.+|.+++..++..|+ +|.++|+++++++.....+.... .+.. .. -.++. ++.+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~-~~----------~~v~~-~~~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSP-TT----------VRVKA-GEYSDC 72 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSS-SC----------CEEEE-CCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcC-CC----------eEEEe-CCHHHh
Confidence 4689999999999999999998885 89999999887664222222210 1110 00 12232 456889
Q ss_pred CCCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHh
Q 007805 386 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (589)
Q Consensus 386 ~~aDlVIeavpe--~~------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (589)
++||+||.+++. ++ .+.+++.+++.+++ |+++++.. +-|+..+.
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~t 130 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVA--TNPVDILA 130 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHH
Confidence 999999999843 22 44556666777775 56655543 34554433
No 237
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.27 E-value=3.2e-07 Score=93.79 Aligned_cols=101 Identities=13% Similarity=-0.004 Sum_probs=71.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..+...|++|++||++++.. + +. .+...+++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~------------------------~~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EK------------------------KGYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HH------------------------TTCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hh------------------------hCeecCCHHHHHhh
Confidence 689999999999999999999999999999987643 1 00 01222244 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~ 436 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-. ...+.+.+.
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999997766443232455677899998886666533 344555443
No 238
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.26 E-value=2e-07 Score=96.37 Aligned_cols=103 Identities=16% Similarity=0.066 Sum_probs=72.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCe-EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
++|+|||+|.||.++|..+...|++ |++||+++...+.+. +.| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcC-------------cEecCCHHHHHh
Confidence 6899999999999999999999997 999999875443321 111 1223345 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--CHHHHhccc
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKT 435 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~ 435 (589)
+||+|+.++|...+.+.-+-++..+.++++++++..+.+- ....+.+.+
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL 271 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAAL 271 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHH
Confidence 9999999999765544433355667889999887666553 333455544
No 239
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.25 E-value=1.2e-06 Score=82.37 Aligned_cols=136 Identities=21% Similarity=0.164 Sum_probs=96.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeC
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~ 106 (589)
.+++.+.+.+...|..++.++..+.|+|.=. |.|+++. ....++ +.+...++|+++.+.
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~----------------~~~~I~-~~i~~~~~~v~t~~~ 96 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYIN----SPGGMVT----------------AGMGVY-DTMQFIKPDVSTICI 96 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHHhCCCeEEEEc
Confidence 4889999999999999987666676666321 2223321 122455 678889999999999
Q ss_pred CcccchhhHHhhhcCE--EEEeCCceEeccccccCCCCChhhhh------------------hHhhhc--CHHHHHHHHH
Q 007805 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ------------------RLPRLV--GLSKAIEMML 164 (589)
Q Consensus 107 G~a~GgG~~lala~D~--~ia~~~a~~~~pe~~~Gl~p~~g~~~------------------~l~~~~--G~~~a~~l~l 164 (589)
|.|.++|.-++++||. |++.+++++.+....-|. .|-.. .+.+.- ......+++-
T Consensus 97 G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~ 173 (201)
T 3p2l_A 97 GLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTD 173 (201)
T ss_dssp EEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTS
T ss_pred CEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhh
Confidence 9999999999999998 999999998776554221 11110 111222 2344555555
Q ss_pred cCCCCCHHHHHHcCCcceecCc
Q 007805 165 LSKSITSEEGWKLGLIDAVVTS 186 (589)
Q Consensus 165 tg~~~~a~~A~~~Glv~~vv~~ 186 (589)
....++|+||+++||||+|++.
T Consensus 174 ~~~~lta~EA~e~GliD~I~~~ 195 (201)
T 3p2l_A 174 RDNFMMADEAKAYGLIDHVIES 195 (201)
T ss_dssp SCEEEEHHHHHHHTSCSEECCC
T ss_pred cCeeecHHHHHHcCCccEecCC
Confidence 5566899999999999999854
No 240
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.24 E-value=1.8e-07 Score=95.56 Aligned_cols=99 Identities=17% Similarity=0.088 Sum_probs=71.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|++||++++.. .+. ..... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~-------------~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEP-------------FLTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTT-------------TCEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhc-------------ccccc-CHHHHHhc
Confidence 689999999999999999999999999999987531 010 11222 44 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhccc
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~ 435 (589)
||+|+.++|-..+.+.-+-.+..+.++++++++..+.+-. ...+.+.+
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL 250 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKAL 250 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHH
Confidence 9999999997665544444566778999999876655433 33454444
No 241
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.22 E-value=1.1e-06 Score=89.70 Aligned_cols=97 Identities=14% Similarity=0.208 Sum_probs=68.7
Q ss_pred CccceEEEEcC-CCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
+..+||+|||+ |.+|.++|..++..|. +|+++|+++++++.....+... ... ..++..++++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~--------~~~-------~~~i~~t~d~ 70 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC--------GFE-------GLNLTFTSDI 70 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH--------CCT-------TCCCEEESCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC--------cCC-------CCceEEcCCH
Confidence 34579999997 9999999999999984 8999999988766433333221 010 1245666776
Q ss_pred -cCCCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCc
Q 007805 383 -SEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHC 417 (589)
Q Consensus 383 -~~~~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ 417 (589)
+++++||+||.+. |. +..+.+++...+.+++++..
T Consensus 71 ~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 71 KEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 7799999999986 21 33456667777888885553
No 242
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.21 E-value=1.1e-06 Score=89.20 Aligned_cols=89 Identities=11% Similarity=0.106 Sum_probs=64.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
++|+|||+|.||..++..+++. |+ +|++||+++++.+...+.+ + ..+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------~-----------~~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------Q-----------GEVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------S-----------SCCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------h-----------CCeEEeCCHHHHH
Confidence 5799999999999999999876 76 8999999999877642210 1 013445566 667
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
+++|+||.|+|... .++.. +.++++++|++.++
T Consensus 195 ~~aDiVi~atp~~~----~v~~~--~~l~~g~~vi~~g~ 227 (312)
T 2i99_A 195 AGADVIITVTLATE----PILFG--EWVKPGAHINAVGA 227 (312)
T ss_dssp TTCSEEEECCCCSS----CCBCG--GGSCTTCEEEECCC
T ss_pred hcCCEEEEEeCCCC----cccCH--HHcCCCcEEEeCCC
Confidence 89999999998532 33322 56788888877543
No 243
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.20 E-value=1e-05 Score=71.58 Aligned_cols=107 Identities=14% Similarity=0.047 Sum_probs=66.8
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCC-HHHHHHHhhcccccCCccCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~~ 385 (589)
.+++|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+.- ...-.|..+ ++.... ..+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~-----~~~~~gd~~~~~~l~~-----------~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG-----FDAVIADPTDESFYRS-----------LDL 68 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT-----CEEEECCTTCHHHHHH-----------SCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC-----CcEEECCCCCHHHHHh-----------CCc
Confidence 357899999999999999999999999999999999877653210 000011111 110000 125
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
+++|+||.++| +.+....+...+...- ...|++...+....+.+
T Consensus 69 ~~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l 112 (141)
T 3llv_A 69 EGVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEF 112 (141)
T ss_dssp TTCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHH
T ss_pred ccCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHH
Confidence 78999999998 4444444444444444 55666655554444443
No 244
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.20 E-value=4.9e-06 Score=83.07 Aligned_cols=102 Identities=17% Similarity=0.260 Sum_probs=67.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.+|.++|..++.++. ++.++|++++..+--...+.+... ... ....+..++|+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~~-----------~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GID-----------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GGT-----------CCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cCC-----------CCCeEecCCCHHHhC
Confidence 589999999999999999998875 899999998765432222222110 000 002345567889999
Q ss_pred CCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 387 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 387 ~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+||+||.+. |- +..+.+++..++.++++ +++++..|
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p-~aivlvvs 118 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVT 118 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEECS
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEec
Confidence 999999876 33 23345566667777765 45554443
No 245
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.18 E-value=2.5e-06 Score=86.49 Aligned_cols=101 Identities=20% Similarity=0.249 Sum_probs=66.8
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCcc
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYS 383 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~ 383 (589)
..+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.... . .+..+.. +.+++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~----~-----------~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL----P-----------FTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh----h-----------hcCCcEEEECcHH
Confidence 44789999999999999999999887 89999999887665322222110 0 0012222 34568
Q ss_pred CCCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 384 ~~~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
++++||+||.+..- +..+.+++.+.+.++++ +++++..|
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvt 125 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAA 125 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECS
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEcc
Confidence 89999999998632 22334555566777764 66655443
No 246
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.18 E-value=1.3e-05 Score=70.47 Aligned_cols=98 Identities=19% Similarity=0.182 Sum_probs=62.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
++|.|+|+|.||..+|..|.+.|++|+++|++++.++...+.. .-..-.+.. +..... ...+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~-----------~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLE-----------DAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHH-----------HTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHH-----------HcCccc
Confidence 5799999999999999999999999999999988766542110 000000111 000000 023678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+|+||.|+|.+. ....+.++.+.++++.+++..+
T Consensus 70 ~d~vi~~~~~~~--~~~~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 70 ADMYIAVTGKEE--VNLMSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp CSEEEECCSCHH--HHHHHHHHHHHTTCCCEEEECS
T ss_pred CCEEEEeeCCch--HHHHHHHHHHHcCCCEEEEEec
Confidence 999999998542 2234445556677777776443
No 247
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.16 E-value=6.8e-06 Score=87.14 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=69.6
Q ss_pred ceEEEEcCCCC-cHHHHHHHHhC-----CCeEEEEeCCh--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 309 ~kI~IIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
+||+|||+|.+ |.+++..|+.. +.+|++||+++ ++++.... +...+.. ..+ . ...+..++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~-~~~~~~~--~~~-~--------~~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGA-LAKRMVE--KAG-V--------PIEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHH-HHHHHHH--HTT-C--------CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHH-HHHHHHh--hcC-C--------CcEEEEeC
Confidence 58999999999 77888888874 56899999999 88776432 2222111 111 0 13566778
Q ss_pred Cc-cCCCCCCEEEEeccCCh----------------------------------HHHHHHHHHHHHhCCCCcEEEe
Q 007805 381 DY-SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 381 ~~-~~~~~aDlVIeavpe~~----------------------------------~~k~~v~~~l~~~~~~~~ii~s 421 (589)
|+ +++++||+||.++|-.. .+..++.+++.+++ |+++++.
T Consensus 76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~ 150 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN 150 (450)
T ss_dssp CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE
Confidence 87 88999999999998421 34567777888887 5566653
No 248
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.12 E-value=3.8e-07 Score=94.08 Aligned_cols=109 Identities=13% Similarity=0.022 Sum_probs=73.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||+++|..+...|++|++||++.+... .+ ....++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~---------------~~--------------~~~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG---------------DE--------------GDFRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT---------------CC--------------SCBCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc---------------cC--------------cccCCHHHHHhh
Confidence 6899999999999999999999999999997533210 00 112344 56789
Q ss_pred CCEEEEeccCChH----HHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccCC-CCcEEEecC
Q 007805 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHF 446 (589)
Q Consensus 388 aDlVIeavpe~~~----~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~-~~r~ig~h~ 446 (589)
||+|+.++|-..+ ...-+-.+..+.++++++++..+.+-. -..+.+.+.. ...-.++--
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV 236 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDV 236 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeec
Confidence 9999999996655 333333556677899999876555433 3445555432 223344443
No 249
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.11 E-value=2.3e-06 Score=86.95 Aligned_cols=106 Identities=23% Similarity=0.329 Sum_probs=65.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHHhhcccccCCccC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~~~~~ 384 (589)
.+||+|||+|.+|.++|..++..|+ +|+++|+++++++..... +..+. .. .--+++. ++.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~d--------l~~~~~~~------~~~~i~~-~~~~a 71 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD--------INHGLPFM------GQMSLYA-GDYSD 71 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH--------HTTSCCCT------TCEEEC---CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH--------HHHhHHhc------CCeEEEE-CCHHH
Confidence 3689999999999999999999998 999999998766531111 11110 00 0012332 45688
Q ss_pred CCCCCEEEEeccCCh--------------HHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 385 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 385 ~~~aDlVIeavpe~~--------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
+++||+||.+++... .+.+++.+.+.+++ |+++++.. +-|+..+
T Consensus 72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~ 129 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVV--SNPVDII 129 (318)
T ss_dssp GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEEC--SSSHHHH
T ss_pred hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHH
Confidence 999999999986422 12356667788886 56655543 3454433
No 250
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.11 E-value=7.3e-06 Score=83.12 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=65.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCccCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~~ 385 (589)
.||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.... .. ...++. ..+.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~~-----------~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----AF-----------TAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----GG-----------SCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH----Hh-----------cCCeEEEECCHHHh
Confidence 689999999999999999998886 89999999887764322222111 00 011222 2456889
Q ss_pred CCCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCcEEEe
Q 007805 386 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 386 ~~aDlVIeavpe--~~------------~~k~~v~~~l~~~~~~~~ii~s 421 (589)
++||+||.+++- ++ .+.+++.+.+.+++ |+++++.
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 119 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLV 119 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 999999998843 22 34555666677775 5565544
No 251
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.09 E-value=1.1e-06 Score=78.39 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=52.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||..++..|...|++|++||+++++.+...+.+ + ......+++ +.+++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----------~-----------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----------E-----------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----------T-----------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----------C-----------CceEeecCHHHHhcC
Confidence 6899999999999999999999999999999999876642211 0 011223444 55788
Q ss_pred CCEEEEeccCC
Q 007805 388 VDMVIEAVIES 398 (589)
Q Consensus 388 aDlVIeavpe~ 398 (589)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999854
No 252
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.07 E-value=8.5e-06 Score=82.90 Aligned_cols=98 Identities=19% Similarity=0.229 Sum_probs=65.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCC--eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCCccC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 384 (589)
-+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.... . ....+.. ..+.++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~i~~~~~~a 73 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----P-----------FTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----H-----------hcCCeEEEECCHHH
Confidence 3689999999999999999998886 89999999887765322222110 0 0011222 245688
Q ss_pred CCCCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCcEEEe
Q 007805 385 FKDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 385 ~~~aDlVIeavpe--~~------------~~k~~v~~~l~~~~~~~~ii~s 421 (589)
+++||+||.+++- ++ .+.+++.+.+.+++ |+++++.
T Consensus 74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 123 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLV 123 (326)
T ss_dssp GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEE
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE
Confidence 9999999998843 22 34555666677776 5555544
No 253
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.07 E-value=5.6e-07 Score=93.04 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=69.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|||||+|.||.++|..+...|++|++||++++.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 589999999999999999999999999999765421 011 01 1234 55789
Q ss_pred CCEEEEeccCChH----HHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccC
Q 007805 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (589)
Q Consensus 388 aDlVIeavpe~~~----~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~ 436 (589)
||+|+.++|-..+ ...-+-++..+.++++++++..+.+-. -..+.+.+.
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999996654 333222456678999998876555433 334555543
No 254
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.05 E-value=8.6e-06 Score=82.30 Aligned_cols=98 Identities=19% Similarity=0.247 Sum_probs=65.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+.... ... . --.++. ++.++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~----~~~--~-------~~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT----PFA--H-------PVWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG----GGS--C-------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH----hhc--C-------CeEEEE-CCHHHhC
Confidence 48999999999999999999887 489999999887764222221110 000 0 012333 4568899
Q ss_pred CCCEEEEecc--CC------------hHHHHHHHHHHHHhCCCCcEEEe
Q 007805 387 DVDMVIEAVI--ES------------VPLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 387 ~aDlVIeavp--e~------------~~~k~~v~~~l~~~~~~~~ii~s 421 (589)
+||+||.+++ .+ ..+.+++.+.+.+++ |+++++.
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 114 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLV 114 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEE
Confidence 9999999874 32 345556667777886 5555543
No 255
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.05 E-value=6.5e-07 Score=91.51 Aligned_cols=100 Identities=13% Similarity=0.011 Sum_probs=71.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||..+|..+...|++|++||++++.. + + ..... .++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~-~~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D------------H-------------PDFDY-VSLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C------------C-------------TTCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h------------H-------------hcccc-CCHHHHHhc
Confidence 689999999999999999999999999999986431 0 0 00111 234 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC--HHHHhcccC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~ 436 (589)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-. ...+.+.+.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999997776544333556678999998876655533 345555554
No 256
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=98.00 E-value=2.3e-05 Score=73.35 Aligned_cols=144 Identities=14% Similarity=0.114 Sum_probs=95.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEE--EEcCCCC----CcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCc
Q 007805 27 ALAIPIVAGLKDKFEEATSRDDVKAIV--LTGNGGR----FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100 (589)
Q Consensus 27 ~l~~~~~~~l~~~l~~~~~~~~v~~vv--l~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp 100 (589)
.++.++...+...|..++.++..+-|. |.+.|.. ...-+|+ .....++ +.+...+.|
T Consensus 36 ~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v----------------~aglaIy-d~m~~~~~~ 98 (205)
T 4gm2_A 36 PIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI----------------TDVISIV-DVINYISSD 98 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHH----------------HHHHHHH-HHHHHSSSC
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCH----------------HHHHHHH-HHHHhcCCC
Confidence 489999999999999988544333333 3343311 0000111 1233566 778899999
Q ss_pred EEEEeCCcccchhhHHhhhcC--EEEEeCCceEeccccccCC----CCChhhh------------hhHhhhc--CHHHHH
Q 007805 101 IVAAVEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGV----IPGFGGT------------QRLPRLV--GLSKAI 160 (589)
Q Consensus 101 ~iaav~G~a~GgG~~lala~D--~~ia~~~a~~~~pe~~~Gl----~p~~g~~------------~~l~~~~--G~~~a~ 160 (589)
|...+-|.|.+.|.-|++++| .|++.+++++-+-...-|. ..+.--. ..+.+.- ......
T Consensus 99 V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~ 178 (205)
T 4gm2_A 99 VYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVIS 178 (205)
T ss_dssp EEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred EEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999 5999999998776554333 1111000 0111121 234455
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCch
Q 007805 161 EMMLLSKSITSEEGWKLGLIDAVVTSE 187 (589)
Q Consensus 161 ~l~ltg~~~~a~~A~~~Glv~~vv~~~ 187 (589)
+++-....++|+||+++||||+|++.+
T Consensus 179 ~~m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 179 NVLERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp HHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred HHhcCCcccCHHHHHHcCCccEeecCC
Confidence 666667779999999999999998653
No 257
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=98.00 E-value=3.3e-05 Score=83.82 Aligned_cols=158 Identities=16% Similarity=0.079 Sum_probs=107.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaa 104 (589)
.-++.+...+.+.++++.+.+. .+-+|.|.- |.|+.+.+-...... ...+.+.+.. + ..+.....|+|++
T Consensus 118 gGs~g~~~~~Ki~r~~e~A~~~-~lPvI~l~d-----SgGArlqe~~~~l~~--~~~~g~i~~~-~-~~ls~~giP~Isv 187 (587)
T 1pix_A 118 AGAWVPGQAECLLRASDTAKTL-HVPLVYVLN-----CSGVKFDEQEKVYPN--RRGGGTPFFR-N-AELNQLGIPVIVG 187 (587)
T ss_dssp TTEECTTHHHHHHHHHHHHHHH-TCCEEEEEC-----CCEECGGGHHHHSSS--TTSTTHHHHH-H-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEe-----CCCCCccccchhccc--cccHHHHHHH-H-HHHhCCCCCEEEE
Confidence 4789999999999999988865 345666654 456666543221110 0122332322 3 3477889999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeC-CceEecccc--ccCCCCChhhhhhHhhhcCHHHHHHHH-HcCCCCCHHH-------
Q 007805 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPEL--TLGVIPGFGGTQRLPRLVGLSKAIEMM-LLSKSITSEE------- 173 (589)
Q Consensus 105 v~G~a~GgG~~lala~D~~ia~~-~a~~~~pe~--~~Gl~p~~g~~~~l~~~~G~~~a~~l~-ltg~~~~a~~------- 173 (589)
|.|.|.|||... ..||++|+++ ++.+++.-. --++.| ...+|..+|.+++ .||+.+++++
T Consensus 188 v~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~vi~~~~~--------~~~~d~~~A~el~~~tge~v~~e~lgga~~h 258 (587)
T 1pix_A 188 IYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAGIMGGMNP--------KGHVDLEYANEIADMVDRTGKTEPPGAVDIH 258 (587)
T ss_dssp ECSEEETHHHHH-HHSSSEEEEETTCEEESCCCTTCCSCCS--------SSSCCHHHHHHHHHHHHTTCCCCCSSBHHHH
T ss_pred EecCCcHHHHHH-HhcCceEEecCCcEEEecCHHHHhhhcc--------ccccchhHHHHHHHHhCCccChhhcccHHHH
Confidence 999999999999 9999998886 488876221 111111 1127899999999 9999988765
Q ss_pred HHHcCCcceecCchHHHHHHHHHHHHHHhcC
Q 007805 174 GWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (589)
Q Consensus 174 A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (589)
+.+.|++|.++++++ .+.+.++++.+.-
T Consensus 259 ~~~~GvvD~vv~~e~---~a~~~~r~~ls~l 286 (587)
T 1pix_A 259 YTETGFMREVYASEE---GVLEGIKKYVGML 286 (587)
T ss_dssp TTTSCCSCEEESSHH---HHHHHHHHHHHTS
T ss_pred HhhcCceeEecCCHH---HHHHHHHHHHHhC
Confidence 236899999998775 4455555555443
No 258
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.96 E-value=1.9e-06 Score=85.69 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=64.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||.++|..|.+.|++|++||+++++.+...+. .| +...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~----------~g-------------~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK----------FP-------------LEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT----------SC-------------EEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----------cC-------------CeeehhHHhhhcC
Confidence 589999999999999999999999999999998876553110 01 2233344 66789
Q ss_pred CCEEEEeccCChHHH-HHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLK-QKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k-~~v~~~l~~~~~~~~ii~s~ts 424 (589)
+|+||.|+|....-. ...+. .+.+++++++++.+.
T Consensus 187 aDiVi~atp~~~~~~~~~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 187 VQVIVNTTSVGLKDEDPEIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSEEEECSSTTSSTTCCCSSC--GGGCCTTSEEEESSS
T ss_pred CCEEEEeCCCCCCCCCCCCCC--HHHcCCCCEEEEcCC
Confidence 999999998654100 00111 245778888877666
No 259
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.95 E-value=2.5e-05 Score=66.28 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=36.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC-CeEEEEeCChHHHHHH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKG 347 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~ 347 (589)
+++|.|+|+|.||..++..|.+.| ++|+++|+++++++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 478999999999999999999999 9999999999887664
No 260
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.95 E-value=3.2e-05 Score=71.67 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=36.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~~ 347 (589)
++|.|+|+|.||..+|..|.+. |++|+++|+++++.+.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 5799999999999999999999 99999999999887664
No 261
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.94 E-value=4.7e-05 Score=67.29 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=37.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
.++|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 3689999999999999999999999999999999988765
No 262
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.93 E-value=1.7e-05 Score=70.04 Aligned_cols=83 Identities=19% Similarity=0.157 Sum_probs=58.5
Q ss_pred ccceEEEEcC----CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 307 GVRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 307 ~~~kI~IIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
..++|+|||+ |.||..++..|.+.||+|+.+|++.+.+ ..+....++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~ 63 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSV 63 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSG
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCH
Confidence 3478999999 9999999999999999855555542111 123444555
Q ss_pred -cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEe
Q 007805 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 383 -~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s 421 (589)
+..+.+|+||.++| .+...+++.++.+ ...+.++..
T Consensus 64 ~el~~~vDlvii~vp--~~~v~~v~~~~~~-~g~~~i~~~ 100 (138)
T 1y81_A 64 RELPKDVDVIVFVVP--PKVGLQVAKEAVE-AGFKKLWFQ 100 (138)
T ss_dssp GGSCTTCCEEEECSC--HHHHHHHHHHHHH-TTCCEEEEC
T ss_pred HHhCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEEc
Confidence 44567999999999 5666777777665 455666543
No 263
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.93 E-value=8.9e-07 Score=90.45 Aligned_cols=101 Identities=15% Similarity=0.019 Sum_probs=70.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
=++|+|||+|.||..+|..+...|++|++||++++.. + + ..+.. .++ +.++
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~-~~l~ell~ 197 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I------------E-------------DYCTQ-VSLDEVLE 197 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C------------T-------------TTCEE-CCHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H------------H-------------hcccc-CCHHHHHh
Confidence 3689999999999999999999999999999986431 0 0 00111 244 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC--CHHHHhcccC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~ 436 (589)
+||+|+.++|...+.+.-+-++..+.++++++++..+.+- ....+.+.+.
T Consensus 198 ~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 198 KSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp HCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 9999999999765443333245667789999887655543 3344555443
No 264
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.87 E-value=1.6e-05 Score=79.83 Aligned_cols=89 Identities=22% Similarity=0.286 Sum_probs=61.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||..+|..+...|.+|++||+++++.+.+. +.|. ..+. ..++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-----------EMGM----------EPFH-ISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTS----------EEEE-GGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HCCC----------eecC-hhhHHHHhcC
Confidence 6899999999999999999999999999999987654421 1110 0000 1233 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
+|+||.++|...-- ++..+.++++.++++.+.
T Consensus 214 aDvVi~~~p~~~i~-----~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 214 VDVCINTIPALVVT-----ANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp CSEEEECCSSCCBC-----HHHHHHSCTTCEEEECSS
T ss_pred CCEEEECCChHHhC-----HHHHHhcCCCCEEEEecC
Confidence 99999999854321 123345788888765543
No 265
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.87 E-value=1.4e-05 Score=80.49 Aligned_cols=89 Identities=20% Similarity=0.218 Sum_probs=61.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||..+|..+...|++|++||+++++.+.+. +.|. ..+. ..++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT-----------EMGL----------VPFH-TDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTC----------EEEE-GGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCC----------eEEc-hhhHHHHhhC
Confidence 6899999999999999999999999999999987655421 1110 0001 1233 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
||+||.++|...-- ++..+.+++++++++.+.
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEECSS
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEEEeC
Confidence 99999999953311 223355777877765543
No 266
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.82 E-value=1.6e-05 Score=70.84 Aligned_cols=101 Identities=12% Similarity=0.023 Sum_probs=65.3
Q ss_pred ceEEEEcC----CCCcHHHHHHHHhCCCeEEEEeCCh--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 309 ~kI~IIG~----G~mG~~iA~~l~~~G~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
++|+|||+ |.||..++..|.+.||+|+.+|++. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 57999999 8999999999999999866666553 111 123344455
Q ss_pred -cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhccc-CCCCcEEE
Q 007805 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIG 443 (589)
Q Consensus 383 -~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~-~~~~r~ig 443 (589)
+....+|+|+.++|. +...+++.++.+ ...+.+++. +++.. .++.+.. ...-+++|
T Consensus 65 ~el~~~~Dlvii~vp~--~~v~~v~~~~~~-~g~~~i~i~-~~~~~-~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 65 ADVPEKVDMVDVFRNS--EAAWGVAQEAIA-IGAKTLWLQ-LGVIN-EQAAVLAREAGLSVVM 122 (145)
T ss_dssp TTCSSCCSEEECCSCS--THHHHHHHHHHH-HTCCEEECC-TTCCC-HHHHHHHHTTTCEEEC
T ss_pred HHcCCCCCEEEEEeCH--HHHHHHHHHHHH-cCCCEEEEc-CChHH-HHHHHHHHHcCCEEEc
Confidence 444679999999994 445677777666 345566654 44443 3443333 33445554
No 267
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.82 E-value=9.3e-05 Score=74.83 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=62.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc---cCCc
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY 382 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 382 (589)
+||+|||+ |.+|.+++..|+..| .+|+++|+++ ....+ .. +...... ..+.. ++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a-~d--------L~~~~~~--------~~l~~~~~t~d~ 62 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVA-AD--------LSHIETR--------ATVKGYLGPEQL 62 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHH-HH--------HTTSSSS--------CEEEEEESGGGH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHH-HH--------HhccCcC--------ceEEEecCCCCH
Confidence 38999998 999999999999988 6999999997 11111 00 1111100 13443 3567
Q ss_pred -cCCCCCCEEEEec--cCCh------------HHHHHHHHHHHHhCCCCcEEEe
Q 007805 383 -SEFKDVDMVIEAV--IESV------------PLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 383 -~~~~~aDlVIeav--pe~~------------~~k~~v~~~l~~~~~~~~ii~s 421 (589)
+++++||+||.++ |.+. .+.+++.+.+.+++ |+++++.
T Consensus 63 ~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv 115 (314)
T 1mld_A 63 PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICI 115 (314)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE
Confidence 4699999999987 3322 55667777788887 4444443
No 268
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.82 E-value=3.3e-05 Score=69.54 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=35.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (589)
++|.|+|+|.||..++..|...|++|+++|+++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 68999999999999999999999999999999887654
No 269
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.80 E-value=0.00012 Score=80.62 Aligned_cols=144 Identities=17% Similarity=0.092 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCC-CCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEeCCccc
Q 007805 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG-FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110 (589)
Q Consensus 32 ~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav~G~a~ 110 (589)
...++.+.|+.+..|+.++.|+|.-. |.| +++.... ...+.+ +.+....|||||.+++ +.
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~-------------~I~~~i-~~~k~~gkpvva~~~~-aa 131 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQ-------------YIGKAL-KEFRDSGKPVYAVGEN-YS 131 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHH-------------HHHHHH-HHHHHTTCCEEEEESC-EE
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHH-------------HHHHHH-HHHHhcCCeEEEEEcc-ch
Confidence 46788999999999999999999743 122 3433221 112333 3455567999999876 67
Q ss_pred chhhHHhhhcCEEEEeCCceEecccccc------------CCCC---------Chhhhh-----------hH--------
Q 007805 111 GGGLELAMGCHARIAAPKTQLGLPELTL------------GVIP---------GFGGTQ-----------RL-------- 150 (589)
Q Consensus 111 GgG~~lala~D~~ia~~~a~~~~pe~~~------------Gl~p---------~~g~~~-----------~l-------- 150 (589)
.+|+-|+.+||.+++.+.+.++...+.. |+-+ +.+-.+ .+
T Consensus 132 s~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~ 211 (593)
T 3bf0_A 132 QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 211 (593)
T ss_dssp HHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 8899999999999999999888766542 2210 000000 01
Q ss_pred ---------hhhcCHHHHHHHHHc-------CCCCCHHHHHHcCCcceecCchHHHHHHH
Q 007805 151 ---------PRLVGLSKAIEMMLL-------SKSITSEEGWKLGLIDAVVTSEELLKVSR 194 (589)
Q Consensus 151 ---------~~~~G~~~a~~l~lt-------g~~~~a~~A~~~Glv~~vv~~~~l~~~a~ 194 (589)
.|-+......+++-. +..++|++|++.||||++...+++.+...
T Consensus 212 ~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~ 271 (593)
T 3bf0_A 212 QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALT 271 (593)
T ss_dssp HHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 122233333344444 79999999999999999997776655443
No 270
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.75 E-value=6.2e-05 Score=66.21 Aligned_cols=98 Identities=17% Similarity=0.115 Sum_probs=59.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c-CC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S-EF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~-~~ 385 (589)
+++|.|+|+|.+|..++..|...|++|+++|++++..+.+. +.+. . .......-...+ + .+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-----------~~~~-~-----~~~~d~~~~~~l~~~~~ 68 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-----------SYAT-H-----AVIANATEENELLSLGI 68 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-----------TTCS-E-----EEECCTTCHHHHHTTTG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HhCC-E-----EEEeCCCCHHHHHhcCC
Confidence 46799999999999999999999999999999987765421 1110 0 000000000011 1 25
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
.++|+||.+++.+......+. .......++.+++..+
T Consensus 69 ~~~d~vi~~~~~~~~~~~~~~-~~~~~~~~~~ii~~~~ 105 (144)
T 2hmt_A 69 RNFEYVIVAIGANIQASTLTT-LLLKELDIPNIWVKAQ 105 (144)
T ss_dssp GGCSEEEECCCSCHHHHHHHH-HHHHHTTCSEEEEECC
T ss_pred CCCCEEEECCCCchHHHHHHH-HHHHHcCCCeEEEEeC
Confidence 789999999987644333333 3333345555555433
No 271
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.73 E-value=8.2e-05 Score=74.87 Aligned_cols=98 Identities=19% Similarity=0.277 Sum_probs=62.2
Q ss_pred ceEEEEc-CCCCcHHHHHHHHhCCC--eEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 007805 309 RKVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (589)
Q Consensus 309 ~kI~IIG-~G~mG~~iA~~l~~~G~--~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (589)
+||+|+| +|.+|.+++..|+..|+ ++.++|+ ++++++.....+.... ..+. --.++. ++.+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~----~~~~---------~~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGI----AYDS---------NTRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHH----TTTC---------CCEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHH----hhCC---------CcEEEe-CCHH
Confidence 4899999 99999999999998886 7999999 8766543212221111 0000 011222 3468
Q ss_pred CCCCCCEEEEecc--CCh------------HHHHHHHHHHHHhCCCCcEEEe
Q 007805 384 EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 384 ~~~~aDlVIeavp--e~~------------~~k~~v~~~l~~~~~~~~ii~s 421 (589)
++++||+||.+.. .+. ...+++.+.+.++. +++++..
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv 117 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLT 117 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEE
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE
Confidence 8999999998873 222 34556666677765 4555543
No 272
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.72 E-value=7.8e-05 Score=75.85 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=65.0
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc---cCC
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (589)
.+||+|+| +|.+|.+++..|+..| ++|+++|++++ ...+. . +...... ..+.. +++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~-d--------L~~~~~~--------~~v~~~~~t~d 69 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTA-D--------ISHMDTG--------AVVRGFLGQQQ 69 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHH-H--------HHTSCSS--------CEEEEEESHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHH-H--------hhccccc--------ceEEEEeCCCC
Confidence 36899999 7999999999999998 79999999876 11110 0 1111000 12222 345
Q ss_pred c-cCCCCCCEEEEecc--CCh------------HHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 382 Y-SEFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 382 ~-~~~~~aDlVIeavp--e~~------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
+ +++++||+||.+++ .+. ...+++.+.+.++. ++.++... +-|+..
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~--SNPv~~ 130 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLI--SNPVNS 130 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEEC--CSSHHH
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEE--CCchHH
Confidence 5 67899999999874 221 45566667777777 45555432 344444
No 273
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.70 E-value=5e-05 Score=74.84 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=50.0
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCCC
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (589)
+|+|||+|.||.+++..|.+.|++|+++|+++++.+...+.+ + .. .+++ +. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~----------~-------------~~-~~~~~~~-~~~ 172 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF----------G-------------LR-AVPLEKA-REA 172 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH----------T-------------CE-ECCGGGG-GGC
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------c-------------cc-hhhHhhc-cCC
Confidence 799999999999999999999999999999988766542211 1 01 2344 45 889
Q ss_pred CEEEEeccCC
Q 007805 389 DMVIEAVIES 398 (589)
Q Consensus 389 DlVIeavpe~ 398 (589)
|+||.|+|..
T Consensus 173 Divi~~tp~~ 182 (263)
T 2d5c_A 173 RLLVNATRVG 182 (263)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEccCCC
Confidence 9999999855
No 274
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.67 E-value=0.00037 Score=71.64 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=53.9
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhC--CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
+.+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...++ . .+...+++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~----------------------~-~~~~~~~~ 67 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER----------------------T-GARGHASL 67 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------------------H-CCEEESCH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH----------------------c-CCceeCCH
Confidence 3457899999999999999999887 77765 899999987764321 1 13455666
Q ss_pred -cCCC--CCCEEEEeccCChH
Q 007805 383 -SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 383 -~~~~--~aDlVIeavpe~~~ 400 (589)
+.++ ++|+|++|+|....
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEECCCcHHH
Confidence 4444 89999999996553
No 275
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.65 E-value=2.6e-05 Score=83.04 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=63.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||.|.||.++|..+...|.+|++||+++.....+ ...| ... .++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-----------~~~G-------------~~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-----------AMEG-------------YRV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-----------HTTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-----------HHcC-------------CEe-CCHHHHHhc
Confidence 689999999999999999999999999999998764222 1111 111 234 66899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+|+.++...--+ -.+..+.++++++|+..+++
T Consensus 333 aDiVi~~~~t~~lI----~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVI----NHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSB----CHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCccccc----CHHHHhhCCCCcEEEEcCCC
Confidence 99999998322111 13455678999998766654
No 276
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.63 E-value=2.1e-05 Score=83.42 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=66.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||.|.||.++|..+...|.+|++||+++.....+ ...| +.. .++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-----------~~~g-------------~~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-----------VMEG-------------FNV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-----------HTTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-----------HHcC-------------CEe-cCHHHHHhc
Confidence 689999999999999999999999999999998764332 1112 111 234 66899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC---CCHHHHhc
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGE 433 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~---~~~~~~~~ 433 (589)
||+||.+.. ...+ +-.+..+.++++++|+..+++ +....+.+
T Consensus 313 aDiVi~~~~-t~~l---I~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 313 GDFFITCTG-NVDV---IKLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp CSEEEECCS-SSSS---BCHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CCEEEECCC-hhhh---cCHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 999999963 2221 113445568999998766554 23445544
No 277
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.58 E-value=0.00015 Score=76.03 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=48.1
Q ss_pred cceEEEEcCCCC-cHHHHHHHHh--C---CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 308 VRKVAVIGGGLM-GSGIATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 308 ~~kI~IIG~G~m-G~~iA~~l~~--~---G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
.+||+|||+|.. +.++...|+. . +.+|+++|+++++++.+.. +...+ .... .+++.++|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~-~~~~~---~~~~-----------~~v~~t~d 66 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD-FVKRL---VKDR-----------FKVLISDT 66 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH-HHHHH---HTTS-----------SEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH-HHHHH---hhCC-----------eEEEEeCC
Confidence 368999999985 2222234454 3 4589999999998776322 22111 1100 24666778
Q ss_pred c-cCCCCCCEEEEec
Q 007805 382 Y-SEFKDVDMVIEAV 395 (589)
Q Consensus 382 ~-~~~~~aDlVIeav 395 (589)
+ +++++||+||+++
T Consensus 67 ~~~al~~AD~Viita 81 (417)
T 1up7_A 67 FEGAVVDAKYVIFQF 81 (417)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhCCCCEEEEcC
Confidence 7 8899999999998
No 278
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.58 E-value=0.00032 Score=66.84 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=60.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+||.|+|+|.+|..+|..|.+.|++|+++|+++++++...+.. ...+-.|.. +++... ...+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~-----------~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILR-----------DAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHH-----------HHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHH-----------hcCccc
Confidence 3799999999999999999999999999999999877642210 000001111 110000 023789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHh-CCCCcEEE
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKA-CPPHCILA 420 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~ 420 (589)
||+||.+++++. ...+...+... .+...+++
T Consensus 66 ad~vi~~~~~d~--~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 66 NDVVVILTPRDE--VNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp TCEEEECCSCHH--HHHHHHHHHHHTSCCCEEEE
T ss_pred CCEEEEecCCcH--HHHHHHHHHHHHcCCCeEEE
Confidence 999999998654 23444444444 45555554
No 279
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.57 E-value=8.9e-05 Score=76.06 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=63.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHh-C-CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHIL-N-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~-~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
++|+|||+|.||..++..+.. . ..+|++||+++++.++..+.+.. ..| + .+...+++ +++
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~------~~g-~----------~~~~~~~~~eav 192 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE------YSG-L----------TIRRASSVAEAV 192 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT------CTT-C----------EEEECSSHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh------ccC-c----------eEEEeCCHHHHH
Confidence 579999999999999988754 3 46899999999988775432210 001 0 12334555 667
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
++||+||.|+|... ...++. .+.++++++|...++
T Consensus 193 ~~aDiVi~aTps~~--~~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 193 KGVDIITTVTADKA--YATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp TTCSEEEECCCCSS--EEEEEC--GGGCCTTCEEEECSC
T ss_pred hcCCEEEEeccCCC--CCceec--HHHcCCCCEEEECCC
Confidence 89999999999641 001111 245778887766554
No 280
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.55 E-value=9.1e-05 Score=79.07 Aligned_cols=87 Identities=25% Similarity=0.256 Sum_probs=63.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+ .|. .. .++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~Ga-------------~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EGF-------------DV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCC-------------EE-ecHHHHHhC
Confidence 68999999999999999999999999999999988766421 221 11 122 45678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
+|+||+|++..--+. .+..+.++++++++..+.
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECSS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeCC
Confidence 999999987543222 244556889988865444
No 281
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.55 E-value=0.00012 Score=74.51 Aligned_cols=101 Identities=14% Similarity=0.130 Sum_probs=65.9
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCC-------eEEEEeCC----hHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcc
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 376 (589)
+||+|+|+ |.+|.+++..|+..|+ +|+++|++ +++++.-... +...... ....+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~d--------l~~~~~~------~~~~i 71 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMME--------IDDCAFP------LLAGM 71 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHH--------HHTTTCT------TEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHH--------Hhhhccc------ccCcE
Confidence 58999998 9999999999999886 89999999 5444321111 1111000 11345
Q ss_pred cccCCc-cCCCCCCEEEEecc--C------------ChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 377 KGVLDY-SEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 377 ~~~~~~-~~~~~aDlVIeavp--e------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
..+++. +++++||+||.+.. . +..+.+++.+.+.+++.++++++..|
T Consensus 72 ~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 72 TAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp EEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 555665 77999999998763 2 12345566677888875666554333
No 282
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.54 E-value=5.9e-05 Score=76.83 Aligned_cols=102 Identities=19% Similarity=0.145 Sum_probs=71.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
=++|||||.|.+|..+|..+...|.+|+.||+.+..... +.+ .. ..++ +.++
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~~~-------------~~-~~~l~ell~ 193 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CV-YTSLDELLK 193 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CE-ECCHHHHHH
T ss_pred CcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------hcC-------------ce-ecCHHHHHh
Confidence 368999999999999999999999999999987543211 011 11 2234 5688
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC--CCHHHHhcccC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 436 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~ 436 (589)
.||+|+.++|-..+.+.-+=++....++++++++..+-+ +.-..+.+.+.
T Consensus 194 ~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 194 ESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHH
Confidence 999999999977765443435566678999988644333 33345555554
No 283
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.53 E-value=0.00018 Score=72.53 Aligned_cols=98 Identities=12% Similarity=-0.025 Sum_probs=62.6
Q ss_pred CccceEEEEcCCCCcHH-HHHHHHh-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
|.+.||+|||+|.||.. ++..+.+ .+++++ ++|+++++++...+.. + +...+++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------------------~-~~~~~~~ 60 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY----------------------R-IMPFDSI 60 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH----------------------T-CCBCSCH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------------------C-CCCcCCH
Confidence 34578999999999997 8888876 467877 8999999877643211 1 1224555
Q ss_pred -cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCc-EEEecCCCCCHHHH
Q 007805 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (589)
Q Consensus 383 -~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~~ 431 (589)
+.++++|+|++|+|.... .++..+..+ .+. +++.-..+...++.
T Consensus 61 ~~ll~~~D~V~i~tp~~~h--~~~~~~al~---~gk~vl~EKP~~~~~~~~ 106 (308)
T 3uuw_A 61 ESLAKKCDCIFLHSSTETH--YEIIKILLN---LGVHVYVDKPLASTVSQG 106 (308)
T ss_dssp HHHHTTCSEEEECCCGGGH--HHHHHHHHH---TTCEEEECSSSSSSHHHH
T ss_pred HHHHhcCCEEEEeCCcHhH--HHHHHHHHH---CCCcEEEcCCCCCCHHHH
Confidence 456699999999996554 344343332 232 44443445555443
No 284
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.52 E-value=4.6e-05 Score=79.40 Aligned_cols=87 Identities=20% Similarity=0.160 Sum_probs=62.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||.|.||.++|..+...|.+|+++|+++.....+. ..| ... .++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G-------------~~~-~sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEG-------------YQV-LLVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhC-------------Cee-cCHHHHHhh
Confidence 6899999999999999999999999999999987654431 111 111 244 67899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
||+||.+....--+. .+..+.++++++|+..+.
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEEECSS
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEEEeCC
Confidence 999998764322111 234556889998865543
No 285
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.49 E-value=9.8e-05 Score=71.46 Aligned_cols=78 Identities=22% Similarity=0.194 Sum_probs=53.6
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC-C
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-K 386 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~-~ 386 (589)
||+|||+|.||..++..+.+.|++| .+||+++. .+. ..+++ +.+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~-------------------------------~~~~~~~l~~~ 49 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK-------------------------------MVRGIDEFLQR 49 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT-------------------------------EESSHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh-------------------------------hcCCHHHHhcC
Confidence 7999999999999999999899997 69998842 100 23344 334 6
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
++|+||+|+|.+ .-.++. ...+..+..+++.++
T Consensus 50 ~~DvVv~~~~~~--~~~~~~---~~~l~~G~~vv~~~~ 82 (236)
T 2dc1_A 50 EMDVAVEAASQQ--AVKDYA---EKILKAGIDLIVLST 82 (236)
T ss_dssp CCSEEEECSCHH--HHHHHH---HHHHHTTCEEEESCG
T ss_pred CCCEEEECCCHH--HHHHHH---HHHHHCCCcEEEECc
Confidence 899999999843 222333 334445666655543
No 286
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.49 E-value=0.00024 Score=68.76 Aligned_cols=88 Identities=20% Similarity=0.170 Sum_probs=58.5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
.|.||+|+|+|.||..++..+.+.+.+++ ++|++++. . ..+..+++++.+
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~-------------~gv~v~~dl~~l 52 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T-------------TPYQQYQHIADV 52 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------------------------------CCSCBCSCTTTC
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c-------------CCCceeCCHHHH
Confidence 46799999999999999999998876765 47887651 0 123455666443
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
.++|+||++.+ ++.. ...+. +..+.-+++.|++++.++
T Consensus 53 ~~~DVvIDft~--p~a~---~~~~~--l~~g~~vVigTTG~s~e~ 90 (243)
T 3qy9_A 53 KGADVAIDFSN--PNLL---FPLLD--EDFHLPLVVATTGEKEKL 90 (243)
T ss_dssp TTCSEEEECSC--HHHH---HHHHT--SCCCCCEEECCCSSHHHH
T ss_pred hCCCEEEEeCC--hHHH---HHHHH--HhcCCceEeCCCCCCHHH
Confidence 39999998764 3322 22232 566665666777776543
No 287
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.46 E-value=0.00031 Score=71.58 Aligned_cols=99 Identities=10% Similarity=0.003 Sum_probs=63.0
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
.+.||+|||+|.||..++..+.+. +++|+ ++|+++++.+...+. .+.....+++ +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 61 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKE----------------------LAIPVAYGSYEE 61 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHH----------------------TTCCCCBSSHHH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHH----------------------cCCCceeCCHHH
Confidence 446899999999999999999885 67776 789999887664221 1111345555 4
Q ss_pred CCC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
.++ ++|+|++|+|..... ++..+..+. ...+++.-..+...++.
T Consensus 62 ll~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~e~ 107 (330)
T 3e9m_A 62 LCKDETIDIIYIPTYNQGHY--SAAKLALSQ--GKPVLLEKPFTLNAAEA 107 (330)
T ss_dssp HHHCTTCSEEEECCCGGGHH--HHHHHHHHT--TCCEEECSSCCSSHHHH
T ss_pred HhcCCCCCEEEEcCCCHHHH--HHHHHHHHC--CCeEEEeCCCCCCHHHH
Confidence 444 799999999966543 333333322 12355544445555443
No 288
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.46 E-value=0.00037 Score=71.32 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=63.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+ ..+ ....+++ +.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------------------~~g-~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE----------------------ANG-AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------------------TTT-CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH----------------------HcC-CceeCCHHHH
Confidence 46899999999999999999886 77766 89999988765321 111 3445666 45
Q ss_pred CC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 385 ~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
++ ++|+|++|+|..... ++.....+. ...+++....+....+
T Consensus 61 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~ 104 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTHV--DLITRAVER--GIPALCEKPIDLDIEM 104 (344)
T ss_dssp TTCSCCCEEEECSCGGGHH--HHHHHHHHT--TCCEEECSCSCSCHHH
T ss_pred hcCCCCCEEEEeCCchhhH--HHHHHHHHc--CCcEEEECCCCCCHHH
Confidence 55 799999999965543 333333322 1235554444555544
No 289
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.43 E-value=0.00019 Score=72.87 Aligned_cols=70 Identities=17% Similarity=0.020 Sum_probs=51.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHh-C-CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHIL-N-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~-~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
++|+|||+|.||..++..++. . ..+|.+||+++++.++..+++.. .+ + .+. .+++ +++
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHHh
Confidence 579999999999999999887 3 46899999999988876443221 01 0 123 4455 667
Q ss_pred CCCCEEEEeccCC
Q 007805 386 KDVDMVIEAVIES 398 (589)
Q Consensus 386 ~~aDlVIeavpe~ 398 (589)
++|+||.|+|..
T Consensus 187 -~aDvVi~aTp~~ 198 (322)
T 1omo_A 187 -RCDVLVTTTPSR 198 (322)
T ss_dssp -SSSEEEECCCCS
T ss_pred -CCCEEEEeeCCC
Confidence 999999999853
No 290
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.42 E-value=0.00029 Score=70.94 Aligned_cols=96 Identities=19% Similarity=0.279 Sum_probs=60.4
Q ss_pred ceEEEEc-CCCCcHHHHHHHHhC-C--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc---cCC
Q 007805 309 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (589)
Q Consensus 309 ~kI~IIG-~G~mG~~iA~~l~~~-G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (589)
+||+||| +|.+|.++|..|+.. + .+++++|+++ .++ +.. ++ +..... ...++. +++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~-G~a-----~D--l~~~~~--------~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP-GVA-----VD--LSHIPT--------AVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH-HHH-----HH--HHTSCS--------SEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch-hHH-----HH--hhCCCC--------CceEEEecCCCc
Confidence 4899999 899999999999875 5 4899999997 322 111 00 111110 012322 245
Q ss_pred ccCCCCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCcEEEec
Q 007805 382 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (589)
Q Consensus 382 ~~~~~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (589)
++++++||+||.+... +..+.+++.+.+.+++ |+++++..
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvv 117 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGII 117 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEe
Confidence 6889999999998732 2234455556677776 45555443
No 291
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.41 E-value=0.0038 Score=61.60 Aligned_cols=154 Identities=14% Similarity=0.123 Sum_probs=97.1
Q ss_pred EEEEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHH
Q 007805 15 VAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN 92 (589)
Q Consensus 15 v~~i~l~~p~--~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (589)
|+++ -|++. .-+++....+.+.++++.+.+. .+-+|.|.-.|++ -.++ .... ...+.+.. ..+ .
T Consensus 123 V~v~-a~d~~~~gGs~g~~~~~K~~r~ie~A~~~-~lPlI~l~dsgGa-----r~qE--Gi~s---l~q~aki~-~~l-~ 188 (285)
T 2f9i_B 123 FGVA-VMDSRFRMGSMGSVIGEKICRIIDYCTEN-RLPFILFSASGGA-----RMQE--GIIS---LMQMGKTS-VSL-K 188 (285)
T ss_dssp EEEE-EECTTTGGGCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEECSC-----CGGG--HHHH---HHHHHHHH-HHH-H
T ss_pred EEEE-EEccccccCcCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCc-----chhh--hhhh---HhHHHHHH-HHH-H
Confidence 4434 44553 3789999999999999998865 4567777654432 2221 0000 00111111 233 4
Q ss_pred HHHhCCCcEEEEeCCcccchhhHH-hhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCH
Q 007805 93 LIEDCKKPIVAAVEGLALGGGLEL-AMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171 (589)
Q Consensus 93 ~l~~~~kp~iaav~G~a~GgG~~l-ala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a 171 (589)
++.....|.|+.+-|.|.||+... ++.+|+++|.++|.+++.-.. +..+.+-+.+. -..-+|
T Consensus 189 ~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~-------vi~~~~~~~~~----------e~~~~A 251 (285)
T 2f9i_B 189 RHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRR-------VIEQTINEKLP----------DDFQTA 251 (285)
T ss_dssp HHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH-------HHHHHHTSCCC----------TTTTBH
T ss_pred HHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHH-------HHHHHhcccch----------HhHhhH
Confidence 466789999999999999999654 889999999999887752221 11121211111 111257
Q ss_pred HHHHHcCCcceecCchHHHHHHHHHHHH
Q 007805 172 EEGWKLGLIDAVVTSEELLKVSRLWALD 199 (589)
Q Consensus 172 ~~A~~~Glv~~vv~~~~l~~~a~~~a~~ 199 (589)
+.+.+.|+||.|++++++.+...++...
T Consensus 252 e~~~~~G~iD~Iv~~~e~r~~l~~~L~~ 279 (285)
T 2f9i_B 252 EFLLEHGQLDKVVHRNDMRQTLSEILKI 279 (285)
T ss_dssp HHHHHTTCCSEECCGGGHHHHHHHHHHH
T ss_pred HHHHhcCCccEEeChHHHHHHHHHHHHH
Confidence 7788999999999988877666655543
No 292
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.40 E-value=0.00039 Score=72.25 Aligned_cols=88 Identities=20% Similarity=0.309 Sum_probs=61.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|+|+|.+|.++|..+...|.+|+++|+++.+...+. ..| .. ..++ +.++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G-------------~~-v~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDG-------------FR-LVKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcC-------------CE-eccHHHHHhc
Confidence 6899999999999999999999999999999987654431 111 11 1233 66889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
+|+||.| +....+. -.+....++++++++..+.+
T Consensus 276 ADIVi~a-tgt~~lI---~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 276 VDIVITC-TGNKNVV---TREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp CSEEEEC-SSCSCSB---CHHHHHHSCTTEEEEECSST
T ss_pred CCEEEEC-CCCcccC---CHHHHHhcCCCcEEEEecCC
Confidence 9999997 4333221 12344568899887654433
No 293
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.39 E-value=9.8e-05 Score=74.54 Aligned_cols=91 Identities=14% Similarity=0.164 Sum_probs=60.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
++|+|||+|.||..++..+... ..+|++||++ +.++..+++...+ | -.+... ++ +++
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~------g-----------~~~~~~-~~~eav 181 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC------G-----------VPARMA-APADIA 181 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH------T-----------SCEEEC-CHHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc------C-----------CeEEEe-CHHHHH
Confidence 6799999999999999998763 3589999999 3333322222110 1 012233 55 668
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
++||+||.|+|.... ++. .+.++++++|.+..|.
T Consensus 182 ~~aDIVi~aT~s~~p----vl~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 182 AQADIVVTATRSTTP----LFA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHCSEEEECCCCSSC----SSC--GGGCCTTCEEEECCCS
T ss_pred hhCCEEEEccCCCCc----ccC--HHHcCCCcEEEECCCC
Confidence 899999999985422 222 3467888888766554
No 294
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.38 E-value=0.00023 Score=73.41 Aligned_cols=186 Identities=11% Similarity=0.019 Sum_probs=105.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
++|+|||.|.-|.+-|..|..+|++|++--|.....+.. +.+.+..+. .+...+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~-----~S~~~A~~~-------------Gf~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKR-----ASWRKATEN-------------GFKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTC-----HHHHHHHHT-------------TCEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCccccc-----chHHHHHHC-------------CCEecCHHHHHHhC
Confidence 789999999999999999999999998776633211110 001111222 23444333889999
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCC--CcEEEecCCCCC----------CCCCee
Q 007805 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ--DRIIGAHFFSPA----------HVMPLL 456 (589)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~--~r~ig~h~~~p~----------~~~~lv 456 (589)
|+|+.-+|+.. -.+++++|.++++++..+.- +.+..+.. .....| ..++-+-|-.|- .-.|.+
T Consensus 100 DvV~~L~PD~~--q~~vy~~I~p~lk~G~~L~f-aHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPDKQ--HSDVVRTVQPLMKDGAALGY-SHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCGGG--HHHHHHHHGGGSCTTCEEEE-SSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCChhh--HHHHHHHHHhhCCCCCEEEe-cCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 99999999654 45788999999999988753 33443321 111112 123333332111 112222
Q ss_pred eEe-cCCCCCHHHHHHHHHHHHHcCCe---eEEE--cC-C-CCccccc-ccHHHH----HHHH-HHHHcCCCHHH
Q 007805 457 EIV-RTERTSAQVILDLMTVGKIIKKV---PVVV--GN-C-TGFAVNR-AFFPYS----QSAR-LLVSLGVDVFR 517 (589)
Q Consensus 457 eiv-~~~~t~~e~~~~~~~l~~~lG~~---~v~v--~d-~-~Gfi~nR-i~~~~~----~Ea~-~l~~~Gv~~~~ 517 (589)
.-| +....+-.+.+.+..+...+|.. ++-+ .+ . .-.+.-+ +++..+ ..++ .+++.|.+|+.
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~ 249 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAY 249 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 222 11223445667788888888853 2222 11 1 1122222 343333 3345 56688998853
No 295
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.37 E-value=0.00011 Score=75.62 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=65.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHh--------cCC---CCHHHHHHHhhccc
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT--------RGK---LTQDKANNALKMLK 377 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--------~g~---~~~~~~~~~~~~i~ 377 (589)
.||+|||+|.||..+|..+...|.+|+++|+++++++.+.+ +.. +++. .+. ++++....
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa---~~~~l~~~~~~~~gya~~~~~~~~~~------ 254 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGA---QWLDLGIDAAGEGGYARELSEAERAQ------ 254 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTC---EECCCC-------------CHHHHHH------
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC---eEEeccccccccccchhhhhHHHHhh------
Confidence 68999999999999999999999999999999998877532 100 0000 000 01111000
Q ss_pred ccCCc-cCCCCCCEEEEec--cCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 378 GVLDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 378 ~~~~~-~~~~~aDlVIeav--pe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
...++ +.++++|+||.++ |....- .-+.++..+.++++.+|++.+.
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAP-RLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCC-CCBCHHHHHTSCTTCEEEETTG
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccc-eeecHHHHhcCCCCcEEEEEeC
Confidence 01123 5679999999986 432110 0122455667889999887653
No 296
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.33 E-value=0.00028 Score=73.50 Aligned_cols=86 Identities=19% Similarity=0.232 Sum_probs=61.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|||.|.+|..+|..+...|.+|+++|+++.....+. ..| ... .++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~v-v~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEV-VTLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------cee-ccHHHHHhh
Confidence 6899999999999999999999999999999987644321 111 111 233 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
||+|+.+....--+ -.+....++++++++ |++
T Consensus 303 ADIVv~atgt~~lI----~~e~l~~MK~GAILI-NvG 334 (464)
T 3n58_A 303 ADIVVTTTGNKDVI----TIDHMRKMKDMCIVG-NIG 334 (464)
T ss_dssp CSEEEECCSSSSSB----CHHHHHHSCTTEEEE-ECS
T ss_pred CCEEEECCCCcccc----CHHHHhcCCCCeEEE-EcC
Confidence 99999987532211 134455689999886 444
No 297
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.33 E-value=0.0011 Score=59.21 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=33.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCC-hHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~-~~~~~~ 346 (589)
++|.|+|+|.+|..++..|.+.|++|+++|++ +++.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 57999999999999999999999999999998 455444
No 298
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.32 E-value=0.00036 Score=74.53 Aligned_cols=75 Identities=12% Similarity=0.182 Sum_probs=49.3
Q ss_pred ceEEEEcCCCCcHH--HHHHHHh----C--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 309 RKVAVIGGGLMGSG--IATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 309 ~kI~IIG~G~mG~~--iA~~l~~----~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
.||+|||+|..|.. +...++. . +.+|+++|+++++++.....++..... . | .--.++.++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~-~--~---------~~~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEE-L--N---------SPVKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHH-H--T---------CCCEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHH-c--C---------CCeEEEEeC
Confidence 47999999998754 2222332 2 347999999999887643333322211 1 1 012467788
Q ss_pred Cc-cCCCCCCEEEEec
Q 007805 381 DY-SEFKDVDMVIEAV 395 (589)
Q Consensus 381 ~~-~~~~~aDlVIeav 395 (589)
|. +++++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 88 7799999999986
No 299
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.30 E-value=0.00011 Score=76.28 Aligned_cols=99 Identities=19% Similarity=0.159 Sum_probs=62.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
-++|+|||+|.||..+|..+...|.+|+++|+++++++.+.+.. |.-. .-......++ +.++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----------g~~~-------~~~~~~~~~l~~~l~ 230 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----------CGRI-------HTRYSSAYELEGAVK 230 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSS-------EEEECCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----------CCee-------EeccCCHHHHHHHHc
Confidence 36899999999999999999999999999999998877653211 1000 0000000111 3456
Q ss_pred CCCEEEEeccCChH-HHHHHHHHHHHhCCCCcEEEecC
Q 007805 387 DVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 387 ~aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
++|+||+|++.... ...-+.++..+.++++.+|+..+
T Consensus 231 ~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 231 RADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 89999998842221 11111344456678888776554
No 300
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.30 E-value=0.00037 Score=70.53 Aligned_cols=71 Identities=10% Similarity=-0.018 Sum_probs=49.7
Q ss_pred ccceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 007805 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (589)
.+.||+|||+|.||.. ++..+.+. +++|+ ++|+++++.+...+.. | +...++++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~~ 60 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----------R-------------IPYADSLS 60 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----------T-------------CCBCSSHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCccCcHH
Confidence 3468999999999997 88888764 77876 9999998766532210 1 12334443
Q ss_pred CC-CCCCEEEEeccCChH
Q 007805 384 EF-KDVDMVIEAVIESVP 400 (589)
Q Consensus 384 ~~-~~aDlVIeavpe~~~ 400 (589)
.+ .++|+|++|+|....
T Consensus 61 ~l~~~~D~V~i~tp~~~h 78 (319)
T 1tlt_A 61 SLAASCDAVFVHSSTASH 78 (319)
T ss_dssp HHHTTCSEEEECSCTTHH
T ss_pred HhhcCCCEEEEeCCchhH
Confidence 33 679999999996654
No 301
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.29 E-value=0.0006 Score=70.06 Aligned_cols=97 Identities=20% Similarity=0.141 Sum_probs=62.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+...+++ +.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------g~~~~~~~~~~ 61 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-----------------------NCAGDATMEAL 61 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-----------------------TCCCCSSHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-----------------------CCCCcCCHHHH
Confidence 35899999999999999999887 78855 8899998876642211 12234555 44
Q ss_pred C--CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 385 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 385 ~--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
+ .++|+|++|+|..... ++..+..+. ...+++.-..+...++.
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~~~ 106 (354)
T 3db2_A 62 LAREDVEMVIITVPNDKHA--EVIEQCARS--GKHIYVEKPISVSLDHA 106 (354)
T ss_dssp HHCSSCCEEEECSCTTSHH--HHHHHHHHT--TCEEEEESSSCSSHHHH
T ss_pred hcCCCCCEEEEeCChHHHH--HHHHHHHHc--CCEEEEccCCCCCHHHH
Confidence 5 5799999999976643 333332221 22355544445555443
No 302
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.00067 Score=69.01 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=62.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++.+...+. . .+. .+++ +.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~-~~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA----------------------Y-GCE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------------------T-TCE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH----------------------h-CCC-cCCHHHH
Confidence 46899999999999999999885 77876 799999887664221 0 122 4455 44
Q ss_pred CC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 385 ~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
++ ++|+|++|+|..... ++..+..+. ...+++.-..+....+.
T Consensus 59 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~~ 103 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTHA--DLIERFARA--GKAIFCEKPIDLDAERV 103 (331)
T ss_dssp HHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEECSCSCSSHHHH
T ss_pred hcCCCCCEEEEeCCchhHH--HHHHHHHHc--CCcEEEecCCCCCHHHH
Confidence 44 799999999965543 333333322 22344444445555543
No 303
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.27 E-value=0.0056 Score=65.49 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=97.0
Q ss_pred EEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHH
Q 007805 17 IITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLI 94 (589)
Q Consensus 17 ~i~l~~p~--~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (589)
.|.-+.+. .-++.....+.+.++++.+.+. .+-+|.|.-.| |+-+++- ...+.... ..+ ..+
T Consensus 100 ~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSg-----GaRmqEg--------~~~l~~~~-~i~-~~~ 163 (530)
T 3iav_A 100 AVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDSG-----GARIQEG--------VASLGAYG-EIF-RRN 163 (530)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----SBCGGGT--------HHHHHHHH-HHH-HHH
T ss_pred EEEEECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhhh--------hhhHHHHH-HHH-HHH
Confidence 33344553 4899999999999999998865 45677776543 4444321 00111111 222 112
Q ss_pred H--hCCCcEEEEeCCcccchhhHHhhhcCEEEEeCC-ceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCH
Q 007805 95 E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171 (589)
Q Consensus 95 ~--~~~kp~iaav~G~a~GgG~~lala~D~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a 171 (589)
. .-..|+|++|.|.|.|||......||++|++++ +.+++. |+.... ..+|+.+++
T Consensus 164 ~~~s~~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~--~~~ge~v~~ 221 (530)
T 3iav_A 164 THASGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK--TVTGEDVGF 221 (530)
T ss_dssp HHTTTTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH--HHHCCCCCH
T ss_pred HHHcCCCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHH--HHhCCcCCh
Confidence 2 224999999999999999998889999999875 877763 222111 267889999
Q ss_pred HHH-------HHcCCcceecCch-HHHHHHHHHHHHH
Q 007805 172 EEG-------WKLGLIDAVVTSE-ELLKVSRLWALDI 200 (589)
Q Consensus 172 ~~A-------~~~Glv~~vv~~~-~l~~~a~~~a~~l 200 (589)
++. ...|++|.+++++ +..+.++++...+
T Consensus 222 e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 222 EELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp HHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred hhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhc
Confidence 876 5799999999775 4666666666555
No 304
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.27 E-value=0.00091 Score=67.76 Aligned_cols=69 Identities=20% Similarity=0.073 Sum_probs=49.2
Q ss_pred ceEEEEcCCCCcH-HHHHHHHhC-CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccc-ccCCccCC
Q 007805 309 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYSEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~-~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~~~~ 385 (589)
.||+|||+|.||. .++..+.+. +++|+++|+++++++...++ .| .-. +.++.+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~----------~g------------~~~~~~~~~~~l 60 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATR----------YR------------VSATCTDYRDVL 60 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHH----------TT------------CCCCCSSTTGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH----------cC------------CCccccCHHHHh
Confidence 5899999999998 488888764 77888999999887654221 01 111 23333555
Q ss_pred -CCCCEEEEeccCCh
Q 007805 386 -KDVDMVIEAVIESV 399 (589)
Q Consensus 386 -~~aDlVIeavpe~~ 399 (589)
.++|+|++|+|...
T Consensus 61 ~~~~D~V~i~tp~~~ 75 (323)
T 1xea_A 61 QYGVDAVMIHAATDV 75 (323)
T ss_dssp GGCCSEEEECSCGGG
T ss_pred hcCCCEEEEECCchh
Confidence 68999999999544
No 305
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.26 E-value=0.00055 Score=70.04 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=61.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.||+|||+|.||..++..+.+. +++|+ ++|+++++.+...+. .+.....+++ +.+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK----------------------LGVEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH----------------------HTCSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCceeCCHHHHh
Confidence 5899999999999999998875 67766 789999887664221 1112245555 444
Q ss_pred C--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 386 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
+ ++|+|++|+|..... ++..+..+. ...+++.-..+....+
T Consensus 61 ~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~e 103 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTHS--ELVIACAKA--KKHVFCEKPLSLNLAD 103 (344)
T ss_dssp HCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESCSCSCHHH
T ss_pred cCCCCCEEEEcCCCcchH--HHHHHHHhc--CCeEEEECCCCCCHHH
Confidence 4 799999999965432 333333221 1234444333555544
No 306
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.26 E-value=0.00054 Score=69.80 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=65.2
Q ss_pred ccceEEEEcC-CCCcHHHHHHHHhCCC-------eEEEEeCChHHH--HHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcc
Q 007805 307 GVRKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEYL--LKGIKTIEANVRGLVTRGKLTQDKANNALKML 376 (589)
Q Consensus 307 ~~~kI~IIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 376 (589)
.--||+|+|+ |.+|.+++..++.... ++.++|+++..- +-..-.+ ...... ....+
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL--------~~~~~~------~~~~~ 88 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAEL--------EDCAFP------LLDKV 88 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH--------HHTTCT------TEEEE
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhh--------hhcCcc------CCCcE
Confidence 3458999996 9999999999998653 799999986432 1110111 111000 11233
Q ss_pred cccCCc-cCCCCCCEEEEec--cCC------------hHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 377 KGVLDY-SEFKDVDMVIEAV--IES------------VPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 377 ~~~~~~-~~~~~aDlVIeav--pe~------------~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
..+++. +++++||+||++. |-+ ..+.+++...|.++++++++|+..|
T Consensus 89 ~~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 89 VVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp EEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEcCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 445555 7799999999865 432 3345555566788888888655433
No 307
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.24 E-value=0.0011 Score=66.82 Aligned_cols=99 Identities=18% Similarity=0.138 Sum_probs=61.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCC--eEEEEeC--ChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC--
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD-- 381 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~--~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-- 381 (589)
+||+|+|+ |.+|.+++..|+..|+ ++.++|+ ++++++.....+.... . ..+. --.+..+++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~--~~~~---------~~~i~~~~d~l 68 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-A--GTRS---------DANIYVESDEN 68 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-T--TSCC---------CCEEEEEETTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-H--hcCC---------CeEEEeCCcch
Confidence 38999999 9999999999998885 7999999 7665443222222110 0 0000 012333333
Q ss_pred ccCCCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCcEEEe
Q 007805 382 YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILAT 421 (589)
Q Consensus 382 ~~~~~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (589)
.+++++||+||.+. |. +....+++.+.+.++. ++++..
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv 120 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV 120 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE
Confidence 47899999999876 32 2234446666677777 555543
No 308
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.24 E-value=0.00023 Score=73.70 Aligned_cols=98 Identities=15% Similarity=0.218 Sum_probs=60.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|+|+|+|.+|..++..+...|++|+++|+++++++.+.+.. |.-- ........++ +.+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----------g~~~-------~~~~~~~~~l~~~~~~ 229 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----------GGRV-------ITLTATEANIKKSVQH 229 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSE-------EEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----------CceE-------EEecCCHHHHHHHHhC
Confidence 7899999999999999999999999999999998876642211 1000 0000000111 33568
Q ss_pred CCEEEEeccCChH-HHHHHHHHHHHhCCCCcEEEecC
Q 007805 388 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 388 aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+|+||.|++-... ...-+.++..+.++++.+|+..+
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 9999999973321 11112344556677777776544
No 309
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.24 E-value=6.8e-05 Score=73.30 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=34.3
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHH
Q 007805 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~ 346 (589)
+|.|||+|.||.+++..|++.|. +|++++|++++.+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 69999999999999999999998 99999999887654
No 310
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.23 E-value=0.00045 Score=71.27 Aligned_cols=90 Identities=21% Similarity=0.170 Sum_probs=59.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc--cCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG--VLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~--~~~~-~~ 384 (589)
-++|+|||+|.||..+|..|++. ++|+++||++++++...+ .... ..+.. ..++ +.
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~-----------~~~~---------~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE-----------FATP---------LKVDASNFDKLVEV 74 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT-----------TSEE---------EECCTTCHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHh-----------hCCe---------EEEecCCHHHHHHH
Confidence 36899999999999999999988 999999999998776421 1100 00001 1112 45
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
++++|+||.|+|.... ..+.. ..+..++.+++.+
T Consensus 75 l~~~DvVIn~~P~~~~--~~v~~---a~l~~G~~~vD~s 108 (365)
T 2z2v_A 75 MKEFELVIGALPGFLG--FKSIK---AAIKSKVDMVDVS 108 (365)
T ss_dssp HTTCSCEEECCCHHHH--HHHHH---HHHHTTCCEEECC
T ss_pred HhCCCEEEECCChhhh--HHHHH---HHHHhCCeEEEcc
Confidence 6789999999984332 23332 3344566666544
No 311
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.23 E-value=0.00078 Score=68.33 Aligned_cols=95 Identities=14% Similarity=0.061 Sum_probs=60.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.||+|||+|.||..++..+.+. ++++ .++|+++++.+... +. .+.....+++ +.+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~-----------~~-----------~~~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFA-----------SR-----------YQNIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHG-----------GG-----------SSSCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH-----------HH-----------cCCCeEeCCHHHHh
Confidence 5899999999999999999876 5676 48999988765431 11 1112345566 445
Q ss_pred -CCCCEEEEeccCChHHHHHHHHHHHHhCCCCc-EEEecCCCCCHHH
Q 007805 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (589)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (589)
.++|+|++|+|.... .++..+. +..+. +++.-..+....+
T Consensus 60 ~~~~D~V~i~tp~~~h--~~~~~~a---l~~gk~V~~EKP~~~~~~~ 101 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLH--FAQAKAA---LSAGKHVILEKPAVSQPQE 101 (325)
T ss_dssp TSSCSEEEECSCGGGH--HHHHHHH---HHTTCEEEEESSCCSSHHH
T ss_pred CCCCCEEEEeCChHHH--HHHHHHH---HHcCCcEEEecCCcCCHHH
Confidence 689999999995543 2333333 22333 4444333455543
No 312
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.23 E-value=0.00011 Score=76.17 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=65.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCC---CCHHHHHHHhhccc------cc
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK---LTQDKANNALKMLK------GV 379 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~i~------~~ 379 (589)
.||+|||+|.||..+|..+...|.+|+++|+++++++.+.+ +.. ..+.... -+..........++ -.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~---~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGA---KFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTC---EECCCCC-----------------CHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC---ceeecccccccccccccchhhhcchhhhhhhH
Confidence 68999999999999999999999999999999998777532 100 0000000 00000000000000 00
Q ss_pred CCc-cCCCCCCEEEEec--cCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 380 LDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 380 ~~~-~~~~~aDlVIeav--pe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
.++ +.+++||+||.|+ |.+..- .-+-++..+.++++.+|++.+.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap-~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAP-RLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCC-CCBCHHHHTTSCTTCEEEETTG
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCC-EEecHHHHhcCCCCCEEEEEeC
Confidence 122 5678999999996 432110 0122455667889999987653
No 313
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.23 E-value=0.0072 Score=64.64 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHH-HHHhCCCcEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN-LIEDCKKPIVA 103 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~kp~ia 103 (589)
.-++.....+.+.++++.+.+. .+-+|.|.-. .|+.+.+-. ..+.... +.+.+ ....-..|+|+
T Consensus 118 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~--------~sl~~~~-~i~~~~~~~s~~iP~Is 182 (531)
T 3n6r_B 118 GGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGV--------DSLAGYG-EVFQRNIMASGVVPQIS 182 (531)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTH--------HHHHHHH-HHHHHHHHTTTTSCEEE
T ss_pred cccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCccc--------chhhhHH-HHHHHHHHHhCCCCEEE
Confidence 4799999999999999988765 3556777643 444444310 0011111 12211 11224589999
Q ss_pred EeCCcccchhhHHhhhcCEEEEeCC-ceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHH-------H
Q 007805 104 AVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------W 175 (589)
Q Consensus 104 av~G~a~GgG~~lala~D~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A-------~ 175 (589)
+|.|.|.|||......||++|+.++ +.+++ -|+.... ..+|+.+++++. .
T Consensus 183 vv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP~vI~--~~~ge~v~~E~LGGa~~h~~ 240 (531)
T 3n6r_B 183 MIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGPDVVK--TVTNEQVSAEELGGATTHTR 240 (531)
T ss_dssp EECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHH--HHHCCCCCHHHHHBHHHHHH
T ss_pred EEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCHHHHH--HHhCCccChhhcchHHHHhh
Confidence 9999999999988888999999985 66554 1211111 257899999998 8
Q ss_pred HcCCcceecCch-HHHHHHHHHHHH
Q 007805 176 KLGLIDAVVTSE-ELLKVSRLWALD 199 (589)
Q Consensus 176 ~~Glv~~vv~~~-~l~~~a~~~a~~ 199 (589)
+.|++|.++++| +..+.++++...
T Consensus 241 ~sG~~d~v~~~e~~a~~~~r~lls~ 265 (531)
T 3n6r_B 241 KSSVADAAFENDVEALAEVRRLVDF 265 (531)
T ss_dssp TTSCCSEEESSHHHHHHHHHHHHTT
T ss_pred ccCcceEEeCCHHHHHHHHHHHHHh
Confidence 899999999875 344444444433
No 314
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.22 E-value=0.00051 Score=69.37 Aligned_cols=94 Identities=20% Similarity=0.120 Sum_probs=60.0
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
...||+|||+|.||..++..+.+. ++++ .++|+++++.+...+ .+...+++ +
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~-------------------------~~~~~~~~~~ 63 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP-------------------------GCVIESDWRS 63 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT-------------------------TCEEESSTHH
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh-------------------------hCcccCCHHH
Confidence 346899999999999999999886 6765 599999887544210 02334555 4
Q ss_pred CCC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCc-EEEecCCCCCHHH
Q 007805 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (589)
.++ ++|+|++|+|.... .++..+. ++.+. +++.-..+....+
T Consensus 64 ~l~~~~~D~V~i~tp~~~h--~~~~~~a---l~~Gk~v~~eKP~~~~~~~ 108 (315)
T 3c1a_A 64 VVSAPEVEAVIIATPPATH--AEITLAA---IASGKAVLVEKPLTLDLAE 108 (315)
T ss_dssp HHTCTTCCEEEEESCGGGH--HHHHHHH---HHTTCEEEEESSSCSCHHH
T ss_pred HhhCCCCCEEEEeCChHHH--HHHHHHH---HHCCCcEEEcCCCcCCHHH
Confidence 453 79999999995543 2443332 23343 4444344455543
No 315
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.21 E-value=0.0013 Score=67.34 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=50.4
Q ss_pred ccceEEEEcCCCCcHHHHHHHH-h-CCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~-~-~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
.+.||+|||+|.||..++..+. + .|++| .++|+++++++...+ +.| .....+++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~----------~~g------------~~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN----------ELG------------VETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH----------TTC------------CSEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH----------HhC------------CCcccCCHH
Confidence 4568999999999999999988 5 37775 588999988765321 001 11234455
Q ss_pred cCCC--CCCEEEEeccCChH
Q 007805 383 SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 383 ~~~~--~aDlVIeavpe~~~ 400 (589)
+.++ ++|+|++|+|....
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHhH
Confidence 3444 69999999995543
No 316
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.21 E-value=0.00017 Score=72.37 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 347 (589)
++|.|||+|.||.+++..|++.|+ +|++++|++++++..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l 181 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERL 181 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999998 999999999887654
No 317
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.21 E-value=0.00061 Score=60.12 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=65.2
Q ss_pred ceEEEEcC----CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 309 ~kI~IIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
++|+|||+ |.||..++..|.+.||+ +|++||.+... ....+....+++.
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~-------------------------~i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE-------------------------ELFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS-------------------------EETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC-------------------------cCCCEEecCCHHH
Confidence 57999999 89999999999999997 77777763111 0112344455533
Q ss_pred -CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccC-CCCcEEE
Q 007805 385 -FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 443 (589)
Q Consensus 385 -~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~-~~~r~ig 443 (589)
-+..|+++.++| .+...++++++.+.-. ..++.. +++. -.++.+... ..-+++|
T Consensus 67 l~~~vDlavi~vp--~~~~~~v~~~~~~~gi-~~i~~~-~g~~-~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 67 LKEPVDILDVFRP--PSALMDHLPEVLALRP-GLVWLQ-SGIR-HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp CCSCCSEEEECSC--HHHHTTTHHHHHHHCC-SCEEEC-TTCC-CHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEeC--HHHHHHHHHHHHHcCC-CEEEEc-CCcC-HHHHHHHHHHcCCEEEc
Confidence 457999999999 4666677777665433 345543 3333 334433332 3345655
No 318
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.17 E-value=0.00079 Score=69.09 Aligned_cols=73 Identities=16% Similarity=0.044 Sum_probs=51.4
Q ss_pred CCccceEEEEcCCCCcH-HHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 305 ~~~~~kI~IIG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
+|...||+|||+|.||. .++..+.+. +++|+ ++|+++++.+...++. .+...++
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~ 80 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF-----------------------GGEPVEG 80 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH-----------------------CSEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc-----------------------CCCCcCC
Confidence 34456899999999998 788888887 77876 8899998876642211 1223355
Q ss_pred c-cCCC--CCCEEEEeccCChH
Q 007805 382 Y-SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 382 ~-~~~~--~aDlVIeavpe~~~ 400 (589)
+ +.++ +.|+|++|+|....
T Consensus 81 ~~~ll~~~~~D~V~i~tp~~~h 102 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPLPAVLH 102 (350)
T ss_dssp HHHHHTCTTCSEEEECCCGGGH
T ss_pred HHHHhcCCCCCEEEECCCcHHH
Confidence 5 4443 68999999996654
No 319
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.14 E-value=0.0012 Score=58.42 Aligned_cols=101 Identities=13% Similarity=0.044 Sum_probs=64.1
Q ss_pred ceEEEEcC----CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 309 ~kI~IIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
++|+|||+ |.+|..++..|.+.||+ +|++|+.. +. ...+....++ +
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHHH
Confidence 57999999 79999999999999997 66767652 10 0123444555 3
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccC-CCCcEEE
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 443 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~-~~~r~ig 443 (589)
....+|+++.++| .+...+++.++.+.- ...++.. + +..-.++.+... ..-+++|
T Consensus 74 l~~~vDlvvi~vp--~~~~~~vv~~~~~~g-i~~i~~~-~-g~~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 74 IPDKIEVVDLFVK--PKLTMEYVEQAIKKG-AKVVWFQ-Y-NTYNREASKKADEAGLIIVA 129 (144)
T ss_dssp CSSCCSEEEECSC--HHHHHHHHHHHHHHT-CSEEEEC-T-TCCCHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEEeC--HHHHHHHHHHHHHcC-CCEEEEC-C-CchHHHHHHHHHHcCCEEEc
Confidence 3457999999999 466677777766543 3355543 2 323334443332 3345555
No 320
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.09 E-value=0.00049 Score=67.60 Aligned_cols=65 Identities=17% Similarity=0.117 Sum_probs=49.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
++|.|||+|-||.+++..|++.|.+|++++|++++.+... ++ + +... +++.+.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~----------~-------------~~~~-~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL----------G-------------CDCF-MEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH----------T-------------CEEE-SSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC----------C-------------CeEe-cHHHhccC
Confidence 5799999999999999999999999999999998876642 11 1 1111 23334589
Q ss_pred CEEEEeccCC
Q 007805 389 DMVIEAVIES 398 (589)
Q Consensus 389 DlVIeavpe~ 398 (589)
|+||-|+|-.
T Consensus 174 DiVInaTp~G 183 (269)
T 3phh_A 174 DLIINATSAS 183 (269)
T ss_dssp SEEEECCTTC
T ss_pred CEEEEcccCC
Confidence 9999999844
No 321
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.08 E-value=0.0018 Score=65.82 Aligned_cols=68 Identities=19% Similarity=0.127 Sum_probs=48.3
Q ss_pred eEEEEcCCCCcHHH-HHHHHhCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 310 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 310 kI~IIG~G~mG~~i-A~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
||+|||+|.||..+ +..+.+.+++|+ ++|+++++.+...+. .| .....+++ +.++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~----------~g------------~~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATE----------NG------------IGKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------TT------------CSCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHH----------cC------------CCcccCCHHHHhc
Confidence 79999999999998 777777788865 889999876653221 11 11234455 3444
Q ss_pred --CCCEEEEeccCCh
Q 007805 387 --DVDMVIEAVIESV 399 (589)
Q Consensus 387 --~aDlVIeavpe~~ 399 (589)
++|+|++|+|...
T Consensus 60 ~~~~D~V~i~tp~~~ 74 (332)
T 2glx_A 60 DPDVDAVYVSTTNEL 74 (332)
T ss_dssp CTTCCEEEECSCGGG
T ss_pred CCCCCEEEEeCChhH
Confidence 5999999999554
No 322
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.06 E-value=0.0014 Score=67.58 Aligned_cols=70 Identities=23% Similarity=0.169 Sum_probs=50.5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
...||+|||+|.||...+..+.+. +++|+ ++|+++++.+.+. +. .+...+++ +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~-------------g~~~~~~~~~ 59 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QK-------------GLKIYESYEA 59 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TT-------------TCCBCSCHHH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hc-------------CCceeCCHHH
Confidence 345899999999999999988876 67775 7899998765421 11 12345566 3
Q ss_pred CCC--CCCEEEEeccCChH
Q 007805 384 EFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~ 400 (589)
.++ +.|+|++|+|....
T Consensus 60 ll~~~~~D~V~i~tp~~~h 78 (359)
T 3e18_A 60 VLADEKVDAVLIATPNDSH 78 (359)
T ss_dssp HHHCTTCCEEEECSCGGGH
T ss_pred HhcCCCCCEEEEcCCcHHH
Confidence 343 78999999996554
No 323
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.03 E-value=0.0014 Score=67.39 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=62.2
Q ss_pred CCccceEEEEcCCCCcHHHHHHHH-h-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhh-cccccC
Q 007805 305 PRGVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVL 380 (589)
Q Consensus 305 ~~~~~kI~IIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~i~~~~ 380 (589)
.|...||+|||+|.||...+..+. . .+++|+ ++|+++++++...++ .+ .....+
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~g~~~~~~~ 77 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK----------------------YAIEAKDYN 77 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH----------------------HTCCCEEES
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH----------------------hCCCCeeeC
Confidence 445568999999999999999998 4 377766 899999887764321 11 133455
Q ss_pred Cc-cCCC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 381 DY-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 381 ~~-~~~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
++ +.++ +.|+|++|+|..... ++..+..+. ..-+++--.-+...++
T Consensus 78 ~~~~ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--Gk~Vl~EKPla~~~~e 126 (357)
T 3ec7_A 78 DYHDLINDKDVEVVIITASNEAHA--DVAVAALNA--NKYVFCEKPLAVTAAD 126 (357)
T ss_dssp SHHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSSCSSHHH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHHH--HHHHHHHHC--CCCEEeecCccCCHHH
Confidence 66 3343 689999999965543 443333321 1234443333455544
No 324
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.00 E-value=0.0016 Score=66.52 Aligned_cols=70 Identities=20% Similarity=0.212 Sum_probs=50.8
Q ss_pred ceEEEEcCCCCcHHHHHHHH-h-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhh-cccccCCc-c
Q 007805 309 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDY-S 383 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~i~~~~~~-~ 383 (589)
.||+|||+|.||..++..+. + .+++|+ ++|+++++++...+. .+ .....+++ +
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~----------------------~g~~~~~~~~~~~ 60 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQ----------------------YQLNATVYPNDDS 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHH----------------------TTCCCEEESSHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------------------hCCCCeeeCCHHH
Confidence 58999999999999999998 4 377766 889999887664221 11 13445666 4
Q ss_pred CCC--CCCEEEEeccCChH
Q 007805 384 EFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~ 400 (589)
.++ ++|+|++|+|....
T Consensus 61 ll~~~~~D~V~i~tp~~~h 79 (344)
T 3mz0_A 61 LLADENVDAVLVTSWGPAH 79 (344)
T ss_dssp HHHCTTCCEEEECSCGGGH
T ss_pred HhcCCCCCEEEECCCchhH
Confidence 444 59999999996554
No 325
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.97 E-value=0.0016 Score=65.44 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=50.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++. .|. . ....+++...
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~----------~-~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ----------P-FRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT----------T-SCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC----------C-cCCHHHHHhC
Confidence 45899999999999999999874 67877 79999875432 110 0 1123344333
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEec
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (589)
.++|+||+|+|.... .++... .+..+..+++.
T Consensus 64 ~~~DvViiatp~~~h--~~~~~~---al~aG~~Vi~e 95 (304)
T 3bio_A 64 ESVDVALVCSPSREV--ERTALE---ILKKGICTADS 95 (304)
T ss_dssp SSCCEEEECSCHHHH--HHHHHH---HHTTTCEEEEC
T ss_pred CCCCEEEECCCchhh--HHHHHH---HHHcCCeEEEC
Confidence 789999999984332 333333 34445544443
No 326
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=96.96 E-value=0.02 Score=61.45 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=91.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaa 104 (589)
.-++.+...+.+.++++.+.+. .+-+|.|.-.| |+.+.+-..... ....+.+.+ ..+ ..+.....|+|++
T Consensus 134 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSg-----GARl~~q~~~~~--~~~~~~~i~-~~~-~~ls~~giP~Isv 203 (555)
T 3u9r_B 134 GGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSG-----GANLPRQDEVFP--DREHFGRIF-FNQ-ANMSARGIPQIAV 203 (555)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----CBCGGGGGGTSS--STTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCC-----CCCCCCcceeec--ccccHHHHH-HHH-HHHhcCCCCEEEE
Confidence 4789999999999999998865 35567666543 333322111000 011222222 222 2366678999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeC-CceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHHHH-------HH
Q 007805 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WK 176 (589)
Q Consensus 105 v~G~a~GgG~~lala~D~~ia~~-~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~~A-------~~ 176 (589)
|.|.|.|||......||++|+.+ ++.+++ +| |+.+ + ..+|+.+++++. ..
T Consensus 204 v~G~~~GGga~~~a~~d~vim~e~~a~i~~-----------aG----P~vi------k-~~~ge~~~~e~LGGa~~h~~~ 261 (555)
T 3u9r_B 204 VMGSCTAGGAYVPAMSDETVMVREQATIFL-----------AG----PPLV------K-AATGEVVSAEELGGADVHCKV 261 (555)
T ss_dssp ECSCCBGGGGHHHHTSSEEEEETTTCBCBS-----------SC----HHHH------H-HHHCCCCCHHHHHBHHHHHHT
T ss_pred EecCCCccHHHHHHhCCceEEecCCceEEE-----------cc----HHHH------H-HHhcCccChhhccchhhhhhc
Confidence 99999999999999999998775 454332 11 1111 1 167899999998 78
Q ss_pred cCCcceecCchH-HHHHHHHHHH
Q 007805 177 LGLIDAVVTSEE-LLKVSRLWAL 198 (589)
Q Consensus 177 ~Glv~~vv~~~~-l~~~a~~~a~ 198 (589)
.|++|.++++++ ....++++..
T Consensus 262 sGv~d~v~~de~~a~~~~r~~ls 284 (555)
T 3u9r_B 262 SGVADHYAEDDDHALAIARRCVA 284 (555)
T ss_dssp TCSCSEEESSHHHHHHHHHHHHH
T ss_pred cCceeEEeCCHHHHHHHHHHHHH
Confidence 999999997663 2333444433
No 327
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.95 E-value=0.0016 Score=64.08 Aligned_cols=39 Identities=21% Similarity=0.093 Sum_probs=35.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 347 (589)
++|.|||+|-||.+++..|+..|. +|++++|++++.+..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~l 159 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL 159 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 579999999999999999999997 899999999887654
No 328
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=96.94 E-value=0.017 Score=61.98 Aligned_cols=141 Identities=15% Similarity=0.108 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaa 104 (589)
.-++.....+.+.++++.+.++ .+-+|.|+. |.|+.+++-... ...+.+.+.... + + .-..|.|++
T Consensus 108 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~~s-----l~~~~~i~~~~~-~-~-s~~iP~Isv 173 (523)
T 1on3_A 108 GGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGIDS-----LSGYGKMFFANV-K-L-SGVVPQIAI 173 (523)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH-----HHHHHHHHHHHH-H-H-TTTSCEEEE
T ss_pred CCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHHHH-----HHHHHHHHHHHH-H-h-cCCCCEEEE
Confidence 4799999999999999988765 455677765 445555432110 011111111111 1 2 345999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHH-----HHH--Hc
Q 007805 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--KL 177 (589)
Q Consensus 105 v~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~-----~A~--~~ 177 (589)
+.|+|.||+......||++|+.+++.+++. |+..... .+|+.++.+ +.+ +.
T Consensus 174 v~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lggae~h~~~~ 231 (523)
T 1on3_A 174 IAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELGGAEAHMAIS 231 (523)
T ss_dssp EEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHSHHHHHHTT
T ss_pred EcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhcccHHHHhhcc
Confidence 999999999999999999999998887754 2221111 457777764 323 58
Q ss_pred CCcceecCch-HHHHHHHHHHHHHH
Q 007805 178 GLIDAVVTSE-ELLKVSRLWALDIA 201 (589)
Q Consensus 178 Glv~~vv~~~-~l~~~a~~~a~~la 201 (589)
|++|.+++++ ++.+.+.++..-+.
T Consensus 232 G~vd~vv~d~~~~~~~~r~lL~~lp 256 (523)
T 1on3_A 232 GNIHFVAEDDDAAELIAKKLLSFLP 256 (523)
T ss_dssp CCCSEEESSHHHHHHHHHHHHHTSC
T ss_pred CceEEEeCCHHHHHHHHHHHHHhcC
Confidence 9999999854 56666655555443
No 329
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.93 E-value=0.00082 Score=68.32 Aligned_cols=99 Identities=13% Similarity=0.057 Sum_probs=59.6
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
+.+.||+|||+|.||..++..+.+. +++|+ ++|+++++.+... +.. +.-...+++
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a-----------~~~-----------~~~~~~~~~~ 60 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFA-----------NKY-----------HLPKAYDKLE 60 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------CC-----------CCSCEESCHH
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------HHc-----------CCCcccCCHH
Confidence 3456899999999999999988875 45655 7899988755431 111 111245566
Q ss_pred cCCC--CCCEEEEeccCChHHHHHHHHHHHHhCCCC-cEEEecCCCCCHHHH
Q 007805 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNIV 431 (589)
Q Consensus 383 ~~~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~ts~~~~~~~ 431 (589)
+.++ ++|+|++|+|..... ++..... ..+ .+++.-.-+....+.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h~--~~~~~al---~aGk~Vl~EKP~a~~~~e~ 107 (329)
T 3evn_A 61 DMLADESIDVIYVATINQDHY--KVAKAAL---LAGKHVLVEKPFTLTYDQA 107 (329)
T ss_dssp HHHTCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEEESSCCSSHHHH
T ss_pred HHhcCCCCCEEEECCCcHHHH--HHHHHHH---HCCCeEEEccCCcCCHHHH
Confidence 4454 799999999965543 3333332 233 345444445555443
No 330
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.93 E-value=0.0013 Score=67.58 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
++|+|+|+|.||..+|..|...|.+|+++|+++++++..
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~ 212 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAA 212 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 679999999999999999999999999999998876653
No 331
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.92 E-value=0.0035 Score=65.66 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
++|.|+|+|.+|..+|..|...|++|+++|.|++.++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~ 43 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL 43 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 469999999999999999999999999999999998775
No 332
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.90 E-value=0.00097 Score=65.86 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (589)
++|.|+|+|.||.+++..|++.|.+|++++|++++++...
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~ 159 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELA 159 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 6899999999999999999999999999999998876643
No 333
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.90 E-value=0.00057 Score=71.64 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=50.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
++|+|||+|.||..++..+...|. +|+++|+++++++...+.+ |. ..+. ..++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~----------~~~~-~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GG----------EAVR-FDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TC----------EECC-GGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC----------ceec-HHhHHHHhc
Confidence 579999999999999999999998 9999999998764421111 10 0011 1122 4457
Q ss_pred CCCEEEEeccCCh
Q 007805 387 DVDMVIEAVIESV 399 (589)
Q Consensus 387 ~aDlVIeavpe~~ 399 (589)
++|+||.|+|...
T Consensus 227 ~aDvVi~at~~~~ 239 (404)
T 1gpj_A 227 RSDVVVSATAAPH 239 (404)
T ss_dssp TCSEEEECCSSSS
T ss_pred CCCEEEEccCCCC
Confidence 8999999997544
No 334
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.89 E-value=0.00093 Score=66.22 Aligned_cols=41 Identities=10% Similarity=0.098 Sum_probs=36.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~ 349 (589)
++|.|+|+|-||.+++..|++.|. +|++++|++++.+...+
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~ 168 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE 168 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHH
Confidence 689999999999999999999996 99999999988766533
No 335
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.88 E-value=0.0017 Score=68.66 Aligned_cols=87 Identities=18% Similarity=0.220 Sum_probs=61.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|.|+|+|.||.++|..|+..|.+|+++|+++.....+.. .| ... .+. +.++.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-----------~g-------------~dv-~~lee~~~~ 320 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-----------EG-------------LQV-LTLEDVVSE 320 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEE-CCGGGTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------hC-------------Ccc-CCHHHHHHh
Confidence 67999999999999999999999999999999987665421 11 111 233 56788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
+|+|+++....-.+. .+..+.++++.+|+....
T Consensus 321 aDvVi~atG~~~vl~----~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 321 ADIFVTTTGNKDIIM----LDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp CSEEEECSSCSCSBC----HHHHTTSCTTEEEEESSS
T ss_pred cCEEEeCCCChhhhh----HHHHHhcCCCeEEEEcCC
Confidence 999998874322121 223456788888765443
No 336
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.86 E-value=0.0018 Score=63.92 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=36.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
++|.|+|+|.||.+++..|++.|.+|++++|++++++..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~l 158 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEEL 158 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 679999999999999999999999999999999887654
No 337
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.84 E-value=0.024 Score=60.78 Aligned_cols=141 Identities=16% Similarity=0.111 Sum_probs=93.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaa 104 (589)
.-++.....+.+.++++.+.++ .+-+|.|+. |.|+.+.+-... ...+.+.+.+.. + + .-..|.|++
T Consensus 104 gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~~s-----l~~~~~i~~~~~-~-~-s~~iP~Isv 169 (522)
T 1x0u_A 104 GGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGALS-----LEGYGAVFKMNV-M-A-SGVIPQITI 169 (522)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTHHH-----HHHHHHHHHHHH-H-H-TTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHHHH-----HHHHHHHHHHHH-H-h-CCCCcEEEE
Confidence 4799999999999999988765 456777775 455655432110 011111111111 1 2 345999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCC-c-eEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHH-----HHH--
Q 007805 105 VEGLALGGGLELAMGCHARIAAPK-T-QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW-- 175 (589)
Q Consensus 105 v~G~a~GgG~~lala~D~~ia~~~-a-~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~-----~A~-- 175 (589)
+.|+|.||+......||++|+.++ + .+++. |+.... -.+|+.++.+ +.+
T Consensus 170 v~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a--------------------GP~vI~--~~~ge~~~~e~lggae~~~~ 227 (522)
T 1x0u_A 170 MAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT--------------------GPEITK--VVLGEEVSFQDLGGAVVHAT 227 (522)
T ss_dssp ECSEEEGGGGHHHHHSSEEEEECSTTCEEESS--------------------CHHHHH--HTTCCCCCHHHHHBHHHHHH
T ss_pred EcCCCchHHHHHHhcCCeEEEecCCccEEEec--------------------CHHHHH--HHhCCcCChhhcchHHHHhh
Confidence 999999999999999999999987 7 66651 111111 1567777764 223
Q ss_pred HcCCcceecCc-hHHHHHHHHHHHHHH
Q 007805 176 KLGLIDAVVTS-EELLKVSRLWALDIA 201 (589)
Q Consensus 176 ~~Glv~~vv~~-~~l~~~a~~~a~~la 201 (589)
+.|++|.++++ .++.+.+.++..-+.
T Consensus 228 ~~G~~d~vv~~~~~~~~~~~~ll~~lp 254 (522)
T 1x0u_A 228 KSGVVHFMVDSEQEAINLTKRLLSYLP 254 (522)
T ss_dssp TTCCCSEEESCHHHHHHHHHHHHHHSC
T ss_pred cCceeEEEeCCHHHHHHHHHHHHHhcc
Confidence 58999999985 456666666665554
No 338
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.81 E-value=0.0006 Score=69.31 Aligned_cols=95 Identities=19% Similarity=0.151 Sum_probs=61.6
Q ss_pred ceEEEEc-CCCCcHHHHHHHHhCCC--e-----EEEEeCChH--HHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 007805 309 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (589)
Q Consensus 309 ~kI~IIG-~G~mG~~iA~~l~~~G~--~-----V~~~d~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (589)
.||+|+| +|.+|.++|..|+..|. + ++++|+++. .++--...+. ..... ....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~--------~~~~~------~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQ--------DCALP------LLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH--------HTCCT------TEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhH--------hhhhc------ccCCEEE
Confidence 6899999 79999999999998876 5 999999752 2222111111 11000 0122344
Q ss_pred cCC-ccCCCCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCc
Q 007805 379 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHC 417 (589)
Q Consensus 379 ~~~-~~~~~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ 417 (589)
+++ ++++++||+||.+. |. +..+.+++...+.++.+++.
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~ 123 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSV 123 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 444 47899999999875 32 23455667777888887765
No 339
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=96.80 E-value=0.033 Score=59.91 Aligned_cols=137 Identities=15% Similarity=0.048 Sum_probs=90.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHH--hCCCcEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE--DCKKPIV 102 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~kp~i 102 (589)
.-++.....+.+.++++.+.++ .+-+|.|.- |.|+.+.+-.. .+..+. +.+ ..+. .-..|.|
T Consensus 121 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~~--------sl~~~~-~i~-~~~~~~s~~iP~I 184 (548)
T 2bzr_A 121 GGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVV--------SLGLYS-RIF-RNNILASGVIPQI 184 (548)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTTH--------HHHHHH-HHH-HHHHHTTTTSCEE
T ss_pred cCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHHH--------HHHHHH-HHH-HHHHHhcCCCcEE
Confidence 4799999999999999988865 456777765 45565543211 011111 222 1122 3449999
Q ss_pred EEeCCcccchhhHHhhhcCEEEEeCC-ceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHH-----HHH-
Q 007805 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW- 175 (589)
Q Consensus 103 aav~G~a~GgG~~lala~D~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~-----~A~- 175 (589)
+++.|+|.||+......||++|+.++ +.+++. |+..... .+|+.++.+ +.+
T Consensus 185 svv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~e~lggae~h~ 242 (548)
T 2bzr_A 185 SLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELGGAHTHM 242 (548)
T ss_dssp EEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHH
T ss_pred EEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCChHhcccHHHHh
Confidence 99999999999988889999999986 777654 2221111 457788764 223
Q ss_pred -HcCCcceecCch-HHHHHHHHHHHH
Q 007805 176 -KLGLIDAVVTSE-ELLKVSRLWALD 199 (589)
Q Consensus 176 -~~Glv~~vv~~~-~l~~~a~~~a~~ 199 (589)
+.|++|.+++++ ++.+.+.++..-
T Consensus 243 ~~sG~~d~vv~d~~~~~~~~r~lls~ 268 (548)
T 2bzr_A 243 AKSGTAHYAASGEQDAFDYVRELLSY 268 (548)
T ss_dssp HTSSCCSEEESSHHHHHHHHHHHHTT
T ss_pred hccCceeEEeCCHHHHHHHHHHHHHh
Confidence 689999999854 455554444433
No 340
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.78 E-value=0.0029 Score=66.34 Aligned_cols=152 Identities=18% Similarity=0.140 Sum_probs=83.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHH-HHHHHhhHhcCC---C-CHHHHHHH--hhccccc
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTI-EANVRGLVTRGK---L-TQDKANNA--LKMLKGV 379 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~-~~~~~~~~~~g~---~-~~~~~~~~--~~~i~~~ 379 (589)
-||||||+|.||..++..+.+. +.+| .++|+++++.+.+.++. . .... . +..+.... .+....+
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG-------~~~~~~~~~~~~~i~~a~~~g~~~v~ 96 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYG-------DEENAREATTESAMTRAIEAGKIAVT 96 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHS-------SSTTEEECSSHHHHHHHHHTTCEEEE
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcC-------CccccccccchhhhhhhhccCCceEE
Confidence 5799999999999999887654 5554 58899999877753321 0 0000 0 11111111 1234567
Q ss_pred CCc-cCCC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH---HHhcccCCCCcEEEecCCCCCCCC
Q 007805 380 LDY-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVM 453 (589)
Q Consensus 380 ~~~-~~~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~~r~ig~h~~~p~~~~ 453 (589)
+|+ +.++ +.|+|++|+|.. ..-.++ ....+..+.-|++........ ++.+.......+
T Consensus 97 ~D~eeLL~d~dIDaVviaTp~p-~~H~e~---a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv------------ 160 (446)
T 3upl_A 97 DDNDLILSNPLIDVIIDATGIP-EVGAET---GIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVI------------ 160 (446)
T ss_dssp SCHHHHHTCTTCCEEEECSCCH-HHHHHH---HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC------------
T ss_pred CCHHHHhcCCCCCEEEEcCCCh-HHHHHH---HHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCe------------
Confidence 777 4444 689999999742 211122 222333444444322222222 222222111111
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 007805 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (589)
Q Consensus 454 ~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 487 (589)
+.......+..+..+.++.+.+|..++.++
T Consensus 161 ----l~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 161 ----YSLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ----EEECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----eeecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 122222346778888899999999999985
No 341
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.76 E-value=0.0015 Score=63.65 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (589)
++|.|||+|-+|+.+|..|+..|. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999997
No 342
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.76 E-value=0.0016 Score=67.01 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=49.7
Q ss_pred ccceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
...||+|||+|.||.. ++..+.+. +++|+ ++|+++++++... +. .+.....+++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a-----------~~-----------~~~~~~~~~~~ 61 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVH-----------RF-----------ISDIPVLDNVP 61 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGG-----------GT-----------SCSCCEESSHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------Hh-----------cCCCcccCCHH
Confidence 3468999999999985 88888775 67776 8899998866531 11 1123445666
Q ss_pred cCCC--CCCEEEEeccCCh
Q 007805 383 SEFK--DVDMVIEAVIESV 399 (589)
Q Consensus 383 ~~~~--~aDlVIeavpe~~ 399 (589)
+.++ +.|+|++|+|...
T Consensus 62 ~ll~~~~vD~V~i~tp~~~ 80 (359)
T 3m2t_A 62 AMLNQVPLDAVVMAGPPQL 80 (359)
T ss_dssp HHHHHSCCSEEEECSCHHH
T ss_pred HHhcCCCCCEEEEcCCcHH
Confidence 3343 5699999999443
No 343
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.68 E-value=0.0056 Score=62.93 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=60.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
+.||+|||+|.||..++..+... ++++ .++|+++++.+...+. .| +. ......+++ +.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~----------~~-~~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA----------NN-YP--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------TT-CC--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CC--------CCCeeeCCHHHH
Confidence 46899999999999999998875 5665 5889999876553221 01 00 012344555 34
Q ss_pred CC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEec-CCCCCHHH
Q 007805 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN-TSTIDLNI 430 (589)
Q Consensus 385 ~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~-ts~~~~~~ 430 (589)
++ ++|+|++|+|.... .++..+ .+..+.-|.+. ..+....+
T Consensus 67 l~~~~~D~V~i~tp~~~h--~~~~~~---al~aGk~V~~EKP~a~~~~e 110 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLH--VEWAIK---AAEKGKHILLEKPVAMNVTE 110 (362)
T ss_dssp HHCTTCCEEEECCCGGGH--HHHHHH---HHTTTCEEEECSSCSSSHHH
T ss_pred hcCCCCCEEEEcCChHHH--HHHHHH---HHHCCCeEEEecCCcCCHHH
Confidence 43 69999999995553 233333 33445434333 23455543
No 344
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.67 E-value=0.0023 Score=62.99 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=36.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 348 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~ 348 (589)
+++.|+|+|-+|.+++..|++.|. +|++++|++++.+...
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la 161 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALR 161 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 689999999999999999999996 9999999998877653
No 345
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.66 E-value=0.00023 Score=70.47 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~ 346 (589)
++|.|||+|-||.+++..|++.|. +|++++|++++.+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 679999999999999999999999 99999999876544
No 346
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.64 E-value=0.0069 Score=63.95 Aligned_cols=78 Identities=15% Similarity=0.074 Sum_probs=51.9
Q ss_pred CCccceEEEEcCCCCcH-HHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 305 ~~~~~kI~IIG~G~mG~-~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
++...||+|||+|.||. .++..+.+. +++| .++|+++++.+...+. .| +.. ..+...++
T Consensus 80 ~~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~~~-------~~~~~~~~ 141 (433)
T 1h6d_A 80 EDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE----------YG-VDP-------RKIYDYSN 141 (433)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH----------TT-CCG-------GGEECSSS
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CCc-------ccccccCC
Confidence 44556899999999997 899888765 5675 5899999876653221 01 000 01224556
Q ss_pred c-cCCC--CCCEEEEeccCChH
Q 007805 382 Y-SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 382 ~-~~~~--~aDlVIeavpe~~~ 400 (589)
+ +.++ ++|+|++|+|....
T Consensus 142 ~~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 142 FDKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp GGGGGGCTTCCEEEECSCGGGH
T ss_pred HHHHhcCCCCCEEEEcCCchhH
Confidence 6 4454 79999999996554
No 347
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.64 E-value=0.00068 Score=70.83 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=36.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
.+|+|||+|.+|..++..+...|.+|+++|+++++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999999887664
No 348
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.63 E-value=0.0017 Score=64.43 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=37.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTI 351 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~ 351 (589)
+++.|+|+|-+|.+++..|+..|. +|++++|++++.+...+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 689999999999999999999998 7999999999877654433
No 349
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.62 E-value=0.0021 Score=66.26 Aligned_cols=68 Identities=28% Similarity=0.286 Sum_probs=48.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCC---c-c
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLD---Y-S 383 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~---~-~ 383 (589)
+||.|||+|.+|+.+|..|++ .++|++.|++.++++++.+. . ..+.. .+| + +
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~--------~--------------~~~~~d~~d~~~l~~ 73 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEF--------A--------------TPLKVDASNFDKLVE 73 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTT--------S--------------EEEECCTTCHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhcc--------C--------------CcEEEecCCHHHHHH
Confidence 479999999999999998865 58999999999887764220 0 01111 111 1 4
Q ss_pred CCCCCCEEEEeccCCh
Q 007805 384 EFKDVDMVIEAVIESV 399 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~ 399 (589)
.++++|+||.|+|...
T Consensus 74 ~~~~~DvVi~~~p~~~ 89 (365)
T 3abi_A 74 VMKEFELVIGALPGFL 89 (365)
T ss_dssp HHTTCSEEEECCCGGG
T ss_pred HHhCCCEEEEecCCcc
Confidence 4689999999998543
No 350
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.62 E-value=0.0059 Score=62.07 Aligned_cols=71 Identities=15% Similarity=0.021 Sum_probs=50.6
Q ss_pred cceEEEEcCCCCcH-HHHHHHHhCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~-~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
..||||||+|.||. .++..+...|++| .++|+++++.+...++ .+.....+|+ +.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSL----------------------FPSVPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHH----------------------STTCCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHh----------------------cCCCcccCCHHHH
Confidence 45899999999996 6777777778885 5899999877654221 1123345666 44
Q ss_pred CC--CCCEEEEeccCChH
Q 007805 385 FK--DVDMVIEAVIESVP 400 (589)
Q Consensus 385 ~~--~aDlVIeavpe~~~ 400 (589)
++ +.|+|++|+|....
T Consensus 62 l~~~~~D~V~i~tp~~~h 79 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDR 79 (336)
T ss_dssp HTCTTCCEEEECSCGGGH
T ss_pred hhCCCCCEEEEeCChhhH
Confidence 44 68999999996554
No 351
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.61 E-value=0.0051 Score=63.09 Aligned_cols=107 Identities=14% Similarity=0.179 Sum_probs=63.0
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhCCC--e---EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC-
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILNNI--Y---VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL- 380 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~G~--~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~- 380 (589)
..||+||| +|.+|.++|..++..+. + |.++|.+.+..+...+...-. +..+... .+..+...+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amD----L~h~~~p------~~~~v~i~~~ 101 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME----LEDSLYP------LLREVSIGID 101 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH----HHTTTCT------TEEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHh----HHhhhhh------hcCCcEEecC
Confidence 36899999 79999999999998875 3 888776544322211111100 1111100 012233333
Q ss_pred CccCCCCCCEEEEec--cCC------------hHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 381 DYSEFKDVDMVIEAV--IES------------VPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 381 ~~~~~~~aDlVIeav--pe~------------~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
+++++++||+||.+. |-+ ..+.+.+...+.++..++++++..|.
T Consensus 102 ~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 102 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 458899999999865 321 23344444556777667777765553
No 352
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.57 E-value=0.0048 Score=60.82 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (589)
++||.|+|+|.+|+.++..|++.|++|++.+++++..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhh
Confidence 578999999999999999999999999999999876544
No 353
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.57 E-value=0.0013 Score=67.87 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=61.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (589)
++|.|+|+|.+|..++..+...|.+|+++|+++++++.+.+... ..+..-..+. .++ +.+++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----~~~~~~~~~~-------------~~~~~~~~~ 230 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRVELLYSNS-------------AEIETAVAE 230 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGSEEEECCH-------------HHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----ceeEeeeCCH-------------HHHHHHHcC
Confidence 78999999999999999999999999999999998877533110 0000000010 111 34568
Q ss_pred CCEEEEeccCChHHHHH-HHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQK-IFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~-v~~~l~~~~~~~~ii~s~ts 424 (589)
+|+||.|++-....... +.++..+.++++.++++.++
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 99999999532210000 12233455677777765543
No 354
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.53 E-value=0.0061 Score=61.92 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=59.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCC---Ce-EEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 309 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G---~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
.||+|||+|.||..++..+...+ ++ |.++|+++++.+...++ .+.-...+++ +
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQK----------------------HDIPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHH----------------------HTCSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHH
Confidence 58999999999999999887654 34 55789999887664221 1111345566 3
Q ss_pred CCC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
.++ +.|+|++|+|..... ++..+.... ...+++--.-+....+.
T Consensus 61 ll~~~~vD~V~i~tp~~~H~--~~~~~al~~--GkhVl~EKP~a~~~~e~ 106 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK--AAVMLCLAA--GKAVLCEKPMGVNAAEV 106 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH--HHHHHHHHT--TCEEEEESSSSSSHHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHHHhc--CCEEEEECCCCCCHHHH
Confidence 343 699999999966543 333333221 12345443334555443
No 355
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.50 E-value=0.0013 Score=68.46 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
.+|+|+|+|.+|..++..+...|.+|+++|+++++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999998877664
No 356
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.44 E-value=0.0038 Score=63.80 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=50.5
Q ss_pred CccceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
+.|-||||||+|.||.. .+..+... +.+|+ ++|+++++++...++ .+.-...+|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~d~ 78 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADR----------------------FSVPHAFGSY 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHH----------------------HTCSEEESSH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------------------cCCCeeeCCH
Confidence 45679999999999975 46666665 67766 789999987764321 1222345666
Q ss_pred -cCC--CCCCEEEEeccCChH
Q 007805 383 -SEF--KDVDMVIEAVIESVP 400 (589)
Q Consensus 383 -~~~--~~aDlVIeavpe~~~ 400 (589)
+.+ .+.|+|++|+|....
T Consensus 79 ~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 79 EEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp HHHHHCSSCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEEeCCCchh
Confidence 334 468999999996554
No 357
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.44 E-value=0.019 Score=58.84 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=48.2
Q ss_pred ccceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
.+.||||||+|.||.. .+..+.+. +++|+ ++|+++++... + .......+++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~ 58 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------D------------FPDAEVVHELE 58 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------H------------CTTSEEESSTH
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------h------------CCCCceECCHH
Confidence 3468999999999997 56666554 67765 88999865221 0 1123455666
Q ss_pred cCCC--CCCEEEEeccCChHH
Q 007805 383 SEFK--DVDMVIEAVIESVPL 401 (589)
Q Consensus 383 ~~~~--~aDlVIeavpe~~~~ 401 (589)
+.++ +.|+|++|+|.....
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 59 EITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp HHHTCTTCCEEEECSCTTTHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH
Confidence 4444 789999999976643
No 358
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.42 E-value=0.011 Score=56.12 Aligned_cols=129 Identities=13% Similarity=0.151 Sum_probs=77.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHH-HHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
++|.|||+|.+|..-+..|.+.|.+|++++.+... ++. +.+.+.+. .+...-..+.+.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~-----------l~~~~~i~---------~i~~~~~~~dL~~ 91 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINE-----------WEAKGQLR---------VKRKKVGEEDLLN 91 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHH-----------HHHTTSCE---------EECSCCCGGGSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-----------HHHcCCcE---------EEECCCCHhHhCC
Confidence 68999999999999999999999999999976432 211 22333221 0111112256889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHHhcccCCCCcEEEecCCCCC--CCCCeeeEecCCCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTS 465 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~--~~~~lveiv~~~~t~ 465 (589)
+|+||.|+ ++.++...+ ...++. .|.+........ ..|+.|. ...+++.-|.+.+.+
T Consensus 92 adLVIaAT-~d~~~N~~I----~~~ak~-gi~VNvvD~p~~---------------~~f~~Paiv~rg~l~iaIST~G~s 150 (223)
T 3dfz_A 92 VFFIVVAT-NDQAVNKFV----KQHIKN-DQLVNMASSFSD---------------GNIQIPAQFSRGRLSLAISTDGAS 150 (223)
T ss_dssp CSEEEECC-CCTHHHHHH----HHHSCT-TCEEEC-----C---------------CSEECCEEEEETTEEEEEECTTSC
T ss_pred CCEEEECC-CCHHHHHHH----HHHHhC-CCEEEEeCCccc---------------CeEEEeeEEEeCCEEEEEECCCCC
Confidence 99999775 455554444 334553 344322211110 1122222 235666677777889
Q ss_pred HHHHHHHHHHHHH
Q 007805 466 AQVILDLMTVGKI 478 (589)
Q Consensus 466 ~e~~~~~~~l~~~ 478 (589)
|.....+++-++.
T Consensus 151 P~la~~iR~~ie~ 163 (223)
T 3dfz_A 151 PLLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9888888877764
No 359
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.41 E-value=0.00065 Score=66.88 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=60.5
Q ss_pred CccceEEEEc-CCCCcHHHHHHHHhC-CCeEEE-EeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG-~G~mG~~iA~~l~~~-G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
|.+.||+|+| .|.||..++..+.+. +++++. +|++++...- ...+.+. .....+..++|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G------------~d~gel~-----g~~~gv~v~~dl 67 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG------------QDAGAFL-----GKQTGVALTDDI 67 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT------------SBTTTTT-----TCCCSCBCBCCH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc------------ccHHHHh-----CCCCCceecCCH
Confidence 4568999999 899999999988865 677665 6887432100 0001000 000123445666
Q ss_pred -cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 383 -~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
+.++++|+||++.+ ++...+.+... +..+.-+++.|++++..+
T Consensus 68 ~~ll~~~DVVIDfT~--p~a~~~~~~~a---l~~G~~vVigTTG~s~~~ 111 (272)
T 4f3y_A 68 ERVCAEADYLIDFTL--PEGTLVHLDAA---LRHDVKLVIGTTGFSEPQ 111 (272)
T ss_dssp HHHHHHCSEEEECSC--HHHHHHHHHHH---HHHTCEEEECCCCCCHHH
T ss_pred HHHhcCCCEEEEcCC--HHHHHHHHHHH---HHcCCCEEEECCCCCHHH
Confidence 44678999999986 44333444433 334444555666776553
No 360
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.41 E-value=0.0021 Score=65.09 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=57.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
..||+|||+|.||..++..+.+. ++++ .++|+++++ +. .. .+..++++ +.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~~-------------gv~~~~d~~~l 55 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------KT-------------PVFDVADVDKH 55 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------SS-------------CEEEGGGGGGT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------cC-------------CCceeCCHHHH
Confidence 35799999999999999998876 5664 588988653 11 00 12334455 33
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCc-EEEecCCCCCHHHH
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~~ 431 (589)
+.++|+||+|+|..... ..+...+..+. ++++...+..+.++
T Consensus 56 l~~~DvViiatp~~~h~-----~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 56 ADDVDVLFLCMGSATDI-----PEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TTTCSEEEECSCTTTHH-----HHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred hcCCCEEEEcCCcHHHH-----HHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 47899999999866532 22233344444 44444444555444
No 361
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.37 E-value=0.0043 Score=61.69 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=50.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (589)
++|.|+|+|-||.++|..|++.| +|+++++++++++...+.+.... +. .. .. .+...+-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~------~~-~~-~~-----~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL------NK-KF-GE-----EVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH------TC-CH-HH-----HEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc------cc-cc-ce-----eEEEeeHHHhhCCC
Confidence 57999999999999999999999 99999999988766544332110 00 00 00 01111112557789
Q ss_pred CEEEEecc
Q 007805 389 DMVIEAVI 396 (589)
Q Consensus 389 DlVIeavp 396 (589)
|+||-++|
T Consensus 195 DilVn~ag 202 (287)
T 1nvt_A 195 DIIINATP 202 (287)
T ss_dssp CEEEECSC
T ss_pred CEEEECCC
Confidence 99999887
No 362
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.37 E-value=0.022 Score=58.47 Aligned_cols=98 Identities=7% Similarity=0.098 Sum_probs=60.2
Q ss_pred cceEEEEcCCCCcH-HHHHHHHhCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGS-GIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~-~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
.-||||||+|.+|. .++..+...+++|+ ++|+++++.+...++ .+.....+++ +.
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~l 83 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAV----------------------YADARRIATAEEI 83 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------------------SSSCCEESCHHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHHH
Confidence 35899999999995 56777777888854 889999987664221 1223455666 34
Q ss_pred CC--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH
Q 007805 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (589)
Q Consensus 385 ~~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (589)
++ +.|+|++|+|... -.++.....+. ..-|++--.-+...++.
T Consensus 84 l~~~~vD~V~I~tp~~~--H~~~~~~al~a--GkhVl~EKPla~~~~ea 128 (361)
T 3u3x_A 84 LEDENIGLIVSAAVSSE--RAELAIRAMQH--GKDVLVDKPGMTSFDQL 128 (361)
T ss_dssp HTCTTCCEEEECCCHHH--HHHHHHHHHHT--TCEEEEESCSCSSHHHH
T ss_pred hcCCCCCEEEEeCChHH--HHHHHHHHHHC--CCeEEEeCCCCCCHHHH
Confidence 44 5899999999443 33443333321 22345443334455443
No 363
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.35 E-value=0.0032 Score=62.23 Aligned_cols=38 Identities=16% Similarity=0.056 Sum_probs=35.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~ 346 (589)
+++.|||+|-+|.+++..|++.|. +|++++|++++.+.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~ 161 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSE 161 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 689999999999999999999998 99999999987655
No 364
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.32 E-value=0.0051 Score=58.98 Aligned_cols=96 Identities=14% Similarity=-0.018 Sum_probs=59.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc--cCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY--SEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~--~~~ 385 (589)
-++|.|+|+|.+|..+|..|.+.|+ |+++|++++.++.+.. ...+-.|..+.. ..+ ..+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~------~~~~i~gd~~~~------------~~l~~a~i 69 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRS------GANFVHGDPTRV------------SDLEKANV 69 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHT------TCEEEESCTTCH------------HHHHHTTC
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhc------CCeEEEcCCCCH------------HHHHhcCc
Confidence 3689999999999999999999999 9999999988765310 000001111000 011 237
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCC-cEEEecCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTS 424 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~ts 424 (589)
++||.||.+++++.. ..........+.++ .|++-..+
T Consensus 70 ~~ad~vi~~~~~d~~--n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 70 RGARAVIVDLESDSE--TIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp TTCSEEEECCSCHHH--HHHHHHHHHHHCSSSEEEEECSS
T ss_pred chhcEEEEcCCCcHH--HHHHHHHHHHHCCCCeEEEEECC
Confidence 899999999986532 22233334445565 56654433
No 365
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.28 E-value=0.0026 Score=67.52 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=36.1
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHH
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (589)
..++|.|+|+|.||..++..|++.|++|+++|+++++++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 41 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHH
Confidence 3578999999999999999999999999999999877654
No 366
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.26 E-value=0.03 Score=60.04 Aligned_cols=162 Identities=14% Similarity=0.135 Sum_probs=99.8
Q ss_pred EeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHh
Q 007805 19 TLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIED 96 (589)
Q Consensus 19 ~l~~p~--~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (589)
.-|+|. .-+++++..+...++++.+++. .+-+|.|.-.+ .|..|.+-... . .....-..+ ..+..
T Consensus 330 ia~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~-G~~~G~~~E~~------G----~~~~~Ak~l-~~~~~ 396 (522)
T 1x0u_A 330 VANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTP-GYVPGTDQEYK------G----IIRHGAKML-YAFAE 396 (522)
T ss_dssp EEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCSHHHHHT------T----HHHHHHHHH-HHHHH
T ss_pred EEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCC-CCCCchHHHHH------H----HHHHHHHHH-HHHHh
Confidence 334554 2689999999999999988754 55677775433 23333321110 0 111222344 56888
Q ss_pred CCCcEEEEeCCcccchhhHHhh----hcCEEEEeCCceEeccccccCCCCChhhhhhHhhh-cC---------HHHHHHH
Q 007805 97 CKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VG---------LSKAIEM 162 (589)
Q Consensus 97 ~~kp~iaav~G~a~GgG~~lal----a~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~-~G---------~~~a~~l 162 (589)
...|.|+.|-|.|.|||..... .+|+++|.+++.+++- .+-|....+-+. +- .....++
T Consensus 397 ~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~-------gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y 469 (522)
T 1x0u_A 397 ATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVT-------GPEGAVRILYRKEIQQASNPDDVLKQRIAEY 469 (522)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESS-------CHHHHHHHHTSSSSSSSSSSSSSSHHHHHHH
T ss_pred CCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEec-------CHHHHHHHHhhhhhhcccCHHHHHHHHHHHH
Confidence 9999999999999999874443 4999999988877642 222322222222 11 1111100
Q ss_pred HHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHh
Q 007805 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 202 (589)
Q Consensus 163 ~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (589)
.-..-++..+.+.|+||.|+++.++.+......+.+..
T Consensus 470 --~~~~~~~~~~~~~G~iD~II~p~~tR~~L~~~L~~~~~ 507 (522)
T 1x0u_A 470 --RKLFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLKT 507 (522)
T ss_dssp --HHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHTT
T ss_pred --HHhcCCHHHHHhcCCCcEeECHHHHHHHHHHHHHHHhh
Confidence 01124667899999999999998887766666655543
No 367
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.23 E-value=0.0047 Score=61.04 Aligned_cols=75 Identities=16% Similarity=0.161 Sum_probs=54.9
Q ss_pred ceEEEEcCCC-CcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+++.|||.|. +|.++|..|...|.+|+++++....++. .+.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 6899999866 7999999999999999999975443320 022578
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+||-|++-.--++. +.+++++++++....
T Consensus 211 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 211 ADIVIAAMGQPGYVKG-------EWIKEGAAVVDVGTT 241 (300)
T ss_dssp CSEEEECSCCTTCBCG-------GGSCTTCEEEECCCE
T ss_pred CCEEEECCCCCCCCcH-------HhcCCCcEEEEEecc
Confidence 9999999974222222 347899998876543
No 368
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.21 E-value=0.017 Score=61.21 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=52.3
Q ss_pred CccceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC---
Q 007805 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL--- 380 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~--- 380 (589)
+...||+|||+|.||...+..+... |++| .++|+++++++...+.+. +.|. ......+
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~ 80 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGN 80 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSST
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCC
Confidence 4456899999999999999888875 6775 588999998776533221 1110 0122333
Q ss_pred -Cc-cCCC--CCCEEEEeccCChH
Q 007805 381 -DY-SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 381 -~~-~~~~--~aDlVIeavpe~~~ 400 (589)
++ +.++ +.|+|++|+|....
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCCGGGH
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHH
Confidence 55 4454 68999999996554
No 369
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.21 E-value=0.026 Score=53.84 Aligned_cols=40 Identities=18% Similarity=0.026 Sum_probs=35.5
Q ss_pred ccceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHH
Q 007805 307 GVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (589)
Q Consensus 307 ~~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (589)
.-++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 3468999997 999999999999999999999999887655
No 370
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.17 E-value=0.01 Score=62.01 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=37.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC---CeEEEEeCChHHHHHHHHH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIKT 350 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G---~~V~~~d~~~~~~~~~~~~ 350 (589)
|+||+|+|+|.+|..++..|++.| .+|+++|+++++++...+.
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~ 46 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQS 46 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHH
Confidence 468999999999999999999998 3999999999988775443
No 371
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.17 E-value=0.0049 Score=63.46 Aligned_cols=69 Identities=19% Similarity=0.236 Sum_probs=47.9
Q ss_pred ccceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
.+.||+|||+|.||.. .+..+.+. +++|+ ++|+++++++.. .......+++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-------------------------~~~~~~~~~~~ 60 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-------------------------LPDVTVIASPE 60 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-------------------------CTTSEEESCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-------------------------CCCCcEECCHH
Confidence 3468999999999997 66666655 77775 889998764320 1123455666
Q ss_pred cCCC--CCCEEEEeccCChH
Q 007805 383 SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 383 ~~~~--~aDlVIeavpe~~~ 400 (589)
+.++ +.|+|++|+|....
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H 80 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATH 80 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHHH
Confidence 4444 78999999996554
No 372
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.17 E-value=0.0092 Score=60.41 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=32.2
Q ss_pred CccceEEEEcCCCCcHH-HHHHHHhCCCeEEEEeCCh
Q 007805 306 RGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~-iA~~l~~~G~~V~~~d~~~ 341 (589)
+.++||.|||.|-+|.+ +|..|.+.|++|+++|.++
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999996 9999999999999999875
No 373
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.16 E-value=0.0035 Score=61.18 Aligned_cols=73 Identities=14% Similarity=0.166 Sum_probs=54.3
Q ss_pred ceEEEEcCC-CCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G-~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+++.|||.| .+|.++|..|...|..|+++++....++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 689999987 5899999999999999999986533222 33678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+||-|++-..-++. +.+++++++++..+.
T Consensus 194 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLNR-------EMVTPGSVVIDVGIN 224 (276)
T ss_dssp SSEEEECSSCTTCBCG-------GGCCTTCEEEECCCE
T ss_pred CCEEEECCCCCccccH-------hhccCCcEEEEeccC
Confidence 9999999974222222 357889988876653
No 374
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.15 E-value=0.014 Score=55.04 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=34.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHH-hCCCeEEEEeCChH-HHHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLK 346 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~-~~G~~V~~~d~~~~-~~~~ 346 (589)
|++|.|+|+ |.+|..++..|+ +.|++|++.+++++ +++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 566999995 999999999999 89999999999988 6544
No 375
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.10 E-value=0.012 Score=57.78 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=53.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+++.|+|+|-.+++++..|++.|. +|++++|+.++.+...+.+... ...+......+.+++
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~------------------~~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNG------------------FPGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHH------------------CTTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhcc------------------CCcceehhhhhhhhc
Confidence 679999999999999999999996 8999999999877754433211 112233344466788
Q ss_pred CCEEEEecc
Q 007805 388 VDMVIEAVI 396 (589)
Q Consensus 388 aDlVIeavp 396 (589)
+|+||-|+|
T Consensus 188 ~dliiNaTp 196 (269)
T 3tum_A 188 FDLVANASP 196 (269)
T ss_dssp CSEEEECSS
T ss_pred ccccccCCc
Confidence 999999987
No 376
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.10 E-value=0.083 Score=56.64 Aligned_cols=139 Identities=12% Similarity=0.110 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaa 104 (589)
.-++.....+.+.++++.+.+. .+-+|.|.-+| |+-+.+-... ...+.+.+... .......|+|++
T Consensus 111 gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dSg-----GAR~qeg~~~-----l~g~~~~~~~~---~~~s~~iP~Isv 176 (527)
T 1vrg_A 111 GGSLGEMHAKKIVKLLDLALKM-GIPVIGINDSG-----GARIQEGVDA-----LAGYGEIFLRN---TLASGVVPQITV 176 (527)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEEC-----SBCGGGTHHH-----HHHHHHHHHHH---HHHTTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEECCC-----CCCccchhHH-----HHHHHHHHHHH---HHhCCCCCEEEE
Confidence 4789999999999999988765 34566665433 4444321110 00111111111 123556999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCC-ceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCCCHH-----HHH--H
Q 007805 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--K 176 (589)
Q Consensus 105 v~G~a~GgG~~lala~D~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~-----~A~--~ 176 (589)
|.|.|.|||......||++|+.++ +.+++ .|+... +. .+|+.++.+ +.+ +
T Consensus 177 v~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi-~~-~~ge~v~~e~lggae~~~~~ 234 (527)
T 1vrg_A 177 IAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVI-KA-VTGEEISQEDLGGAMVHNQK 234 (527)
T ss_dssp EEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHH-HH-HHCCCCCHHHHHBHHHHHHT
T ss_pred EeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHH-HH-HhCCCCCccccccHHHHhhc
Confidence 999999999988889999999987 66433 121111 11 457777764 323 5
Q ss_pred cCCcceecCch-HHHHHHHHHHHH
Q 007805 177 LGLIDAVVTSE-ELLKVSRLWALD 199 (589)
Q Consensus 177 ~Glv~~vv~~~-~l~~~a~~~a~~ 199 (589)
.|++|.+++++ ++.+.+.++..-
T Consensus 235 ~G~vd~vv~d~~~~~~~~~~~Ls~ 258 (527)
T 1vrg_A 235 SGNAHFLADNDEKAMSLVRTLLSY 258 (527)
T ss_dssp SCCCSEEESSHHHHHHHHHHHHTT
T ss_pred ccceEEEecCHHHHHHHHHHHHHh
Confidence 89999999854 455555555443
No 377
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.09 E-value=0.047 Score=57.13 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=49.6
Q ss_pred ccceEEEEcCCC---CcHHHHHHHHhCC-CeEE--EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 307 GVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 307 ~~~kI~IIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
..-||+|||+|. ||...+..+...+ ++|+ ++|+++++.+...++. | + ......+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g-~---------~~~~~~~ 95 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL----------G-L---------DPSRVYS 95 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH----------T-C---------CGGGBCS
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc----------C-C---------CcccccC
Confidence 345899999999 9999888877765 6765 6799999877643321 1 0 0013455
Q ss_pred Cc-cCCC-------CCCEEEEeccCChH
Q 007805 381 DY-SEFK-------DVDMVIEAVIESVP 400 (589)
Q Consensus 381 ~~-~~~~-------~aDlVIeavpe~~~ 400 (589)
++ +.++ +.|+|++|+|....
T Consensus 96 ~~~~ll~~~~~~~~~vD~V~I~tp~~~H 123 (417)
T 3v5n_A 96 DFKEMAIREAKLKNGIEAVAIVTPNHVH 123 (417)
T ss_dssp CHHHHHHHHHHCTTCCSEEEECSCTTSH
T ss_pred CHHHHHhcccccCCCCcEEEECCCcHHH
Confidence 65 3333 48999999997654
No 378
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.08 E-value=0.0095 Score=63.35 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (589)
+||-|+|+|.+|..+|..|...||+|+++|.|+++++.+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~ 43 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ 43 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 5799999999999999999999999999999999987753
No 379
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.06 E-value=0.0063 Score=60.13 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=54.9
Q ss_pred ceEEEEcCCC-CcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
++|.|||.|. +|..+|..|...|..|+++++....+. +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 208 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------------------------EEVNK 208 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------------------------HHhcc
Confidence 6899999995 699999999999999999985532221 44789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+||-|++-.--++. +.++++++|++....
T Consensus 209 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 209 GDILVVATGQPEMVKG-------EWIKPGAIVIDCGIN 239 (301)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCCB
T ss_pred CCEEEECCCCcccCCH-------HHcCCCcEEEEccCC
Confidence 9999999974221222 346789999876654
No 380
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.06 E-value=0.022 Score=57.86 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=60.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCC-CHHHH-HHHhhcccccCCc-
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY- 382 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~-~~~~~~i~~~~~~- 382 (589)
|.||||+|+|.+|..++..+..+ +++|+ +.|.+++......+. +...-.|.. ..... ...-+.+....+.
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-----dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~ 76 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-----KGYKLFVAIPDNERVKLFEDAGIPVEGTIL 76 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-----TTCCEEESSCCHHHHHHHHHTTCCCCCBGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-----cCCccccccCCCceeecccCCeEEECCchH
Confidence 35899999999999999998876 56765 557766655443221 000011221 11111 1111223333333
Q ss_pred cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 383 ~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
+.+.++|+|++|.|..... +... ..+++.++.++++.+.
T Consensus 77 ~~~~~vDiV~eatg~~~s~--~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 77 DIIEDADIVVDGAPKKIGK--QNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp GTGGGCSEEEECCCTTHHH--HHHH--HTTTTTTCEEEECTTS
T ss_pred HhccCCCEEEECCCccccH--HHHH--HHHHHCCCEEEECCCc
Confidence 3457999999999854422 2211 3566777766665543
No 381
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.02 E-value=0.0094 Score=58.69 Aligned_cols=102 Identities=18% Similarity=0.108 Sum_probs=58.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHHh-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 308 VRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
..||+|+|+ |.||..++..+.. .|++|+ ++|++++.... ...+.+.. . ....+..++++ +
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g------------~d~~~~~g--~--~~~~v~~~~dl~~ 68 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG------------SDAGELAG--A--GKTGVTVQSSLDA 68 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS------------CCTTCSSS--S--SCCSCCEESCSTT
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhh------------hhHHHHcC--C--CcCCceecCCHHH
Confidence 358999998 9999999998774 578877 78887643100 00000000 0 00012335566 5
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHH
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (589)
.++++|+||++.+ ++.-.+.... .+..+.-+++.|+++..++
T Consensus 69 ~l~~~DvVIDft~--p~~~~~~~~~---a~~~G~~vVigTtG~~~e~ 110 (273)
T 1dih_A 69 VKDDFDVFIDFTR--PEGTLNHLAF---CRQHGKGMVIGTTGFDEAG 110 (273)
T ss_dssp TTTSCSEEEECSC--HHHHHHHHHH---HHHTTCEEEECCCCCCHHH
T ss_pred HhcCCCEEEEcCC--hHHHHHHHHH---HHhCCCCEEEECCCCCHHH
Confidence 5678999998775 4433333333 3334444555555666653
No 382
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.95 E-value=0.0091 Score=59.98 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCC---hHHHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~~~~~~~~~ 349 (589)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~ 199 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVE 199 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHH
Confidence 689999999999999999999998 89999999 666665443
No 383
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.94 E-value=0.054 Score=52.23 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=75.4
Q ss_pred cccccCCc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHHHH---hcccCCC-CcEEEecCCCC
Q 007805 375 MLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV---GEKTSSQ-DRIIGAHFFSP 449 (589)
Q Consensus 375 ~i~~~~~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~---~~~~~~~-~r~ig~h~~~p 449 (589)
.+..++|- ++++++|++|.-+|--- ...++.+++.+++++++||+ ||-+++...+ .+.+.+. -.+..+||-.-
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~-~t~~Iakkii~~lpEgAII~-nTCTipp~~ly~~le~l~R~DvgIsS~HPaaV 205 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGN-KQPDIIKKFADAIPEGAIVT-HACTIPTTKFAKIFKDLGREDLNITSYHPGCV 205 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCT-THHHHHHHHGGGSCTTCEEE-ECSSSCHHHHHHHHHHTTCTTSEEEECBCSSC
T ss_pred CcEeecchHHHhcCCCEEEEecCCCC-CcHHHHHHHHhhCcCCCEEe-cccCCCHHHHHHHHHHhCcccCCeeccCCCCC
Confidence 34555554 99999999999998522 24488899999999999875 5555555433 3334433 34666777544
Q ss_pred CCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEE
Q 007805 450 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 486 (589)
Q Consensus 450 ~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v 486 (589)
|-.. .-......-.++|.++++.++.+..|+.++++
T Consensus 206 Pgt~-Gq~~~g~~yAtEEqIeklveLaksa~k~ay~v 241 (358)
T 2b0j_A 206 PEMK-GQVYIAEGYASEEAVNKLYEIGKIARGKAFKM 241 (358)
T ss_dssp TTTC-CCEEEEESSSCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCC-CccccccccCCHHHHHHHHHHHHHhCCCeEec
Confidence 4332 11233444568999999999999999999998
No 384
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.91 E-value=0.0079 Score=59.00 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=54.5
Q ss_pred ceEEEEcCCC-CcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+++.|||.|. .|.++|..|...|..|++.++....++ +.+++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 7899999876 699999999999999999986533222 34689
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+||-|++-.--++. +.+++++++++....
T Consensus 204 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLRS-------DMVKEGVIVVDVGIN 234 (285)
T ss_dssp CSEEEECSSCTTCBCG-------GGSCTTEEEEECCCE
T ss_pred CCEEEECCCCCCcCCH-------HHcCCCeEEEEeccC
Confidence 9999999973221222 456889988876543
No 385
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.87 E-value=0.0066 Score=60.83 Aligned_cols=91 Identities=15% Similarity=-0.007 Sum_probs=58.9
Q ss_pred ceEEEEcCCCC-cHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-----c--C
Q 007805 309 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 380 (589)
Q Consensus 309 ~kI~IIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-----~--~ 380 (589)
++|.|||.|.| |..+|..|+..|..|+++|++..++..-. ...+. ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra----------~~la~----------~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRG----------ESLKL----------NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESC----------CCSSC----------CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHH----------HHHhh----------hcccccccccccHh
Confidence 78999999976 99999999999999999998843211100 00000 00111 1 3
Q ss_pred Cc-cCCCCCCEEEEeccCChH-HHHHHHHHHHHhCCCCcEEEecCCCC
Q 007805 381 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 426 (589)
Q Consensus 381 ~~-~~~~~aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~ts~~ 426 (589)
++ +.+++||+||-|++-.-- +..+ .+++++++++.++.-
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~e-------~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPTE-------YIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCTT-------TSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCHH-------HcCCCeEEEEcCCCc
Confidence 34 567899999999963221 2222 357888888877654
No 386
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.86 E-value=0.014 Score=60.61 Aligned_cols=69 Identities=14% Similarity=0.009 Sum_probs=49.8
Q ss_pred ceEEEEcCC-CCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 309 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 309 ~kI~IIG~G-~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
.||+|||+| .||..++..+... +++|+ ++|+++++.+...++. .+...+++ +.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-----------------------GIPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-----------------------TCCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-----------------------CCCeECCHHHH
Confidence 579999999 9999999988875 56665 8899998876642211 12345565 33
Q ss_pred C--CCCCEEEEeccCChH
Q 007805 385 F--KDVDMVIEAVIESVP 400 (589)
Q Consensus 385 ~--~~aDlVIeavpe~~~ 400 (589)
+ .++|+|++|+|....
T Consensus 60 l~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp HHHSCCSEEEECSCGGGH
T ss_pred HcCCCCCEEEEcCCcHHH
Confidence 4 369999999996553
No 387
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.0051 Score=65.47 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=36.1
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhC-CCeEEEEeCChHHHHHH
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~~ 347 (589)
.+++|.|+|+|.+|.+++..|++. |++|++++|++++++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 457899999999999999999998 78999999998876653
No 388
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.86 E-value=0.18 Score=54.00 Aligned_cols=162 Identities=12% Similarity=0.084 Sum_probs=99.8
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCC
Q 007805 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (589)
Q Consensus 21 ~~p~~--N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (589)
|+|.. -.++++-.....+.++.+++. .+-+|.|-=. +.|..|.+-+.. ...+..-.++ ..+....
T Consensus 337 ~~~~~~~G~~~~~~~~Kaar~i~~a~~~-~~Plv~lvDt-pG~~~G~~~E~~----------g~~~~~A~~~-~a~~~~~ 403 (527)
T 1vrg_A 337 NQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDT-PGYLPGVAQEHG----------GIIRHGAKLL-YAYSEAT 403 (527)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHCC
T ss_pred EcCcccCCCCCHHHHHHHHHHHHHHhhc-CCCeEEEecC-CCCcCchhhHHh----------HHHHHHHHHH-HHHhcCC
Confidence 45542 589999999999999888643 4555555322 234444432211 1122222444 5678899
Q ss_pred CcEEEEeCCcccchhhHHhh----hcCEEEEeCCceEeccccccCCCCChhhhhhHhhhc-----CHHHHHH-HH--HcC
Q 007805 99 KPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MM--LLS 166 (589)
Q Consensus 99 kp~iaav~G~a~GgG~~lal----a~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~-----G~~~a~~-l~--ltg 166 (589)
.|+|+.|-|.|.|||..-.. .+|+++|.++++++ .+++-|....+-+.- .....++ +. +.-
T Consensus 404 vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 476 (527)
T 1vrg_A 404 VPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQ 476 (527)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 99999999999988874332 38988887777665 444444444443321 1111111 22 112
Q ss_pred CCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHh
Q 007805 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 202 (589)
Q Consensus 167 ~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (589)
+.-++..+.+.|+||+|+++.+.........+.+..
T Consensus 477 ~~~~p~~~~~~g~iD~II~p~~tR~~l~~~L~~l~~ 512 (527)
T 1vrg_A 477 QFANPYIAASRGYVDMVIDPRETRKYIMRALEVCET 512 (527)
T ss_dssp HTSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTT
T ss_pred hhCCHHHHHHcCCCCeeeCHHHHHHHHHHHHHHHhc
Confidence 236778899999999999998877666555555543
No 389
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.82 E-value=0.023 Score=57.79 Aligned_cols=71 Identities=11% Similarity=-0.066 Sum_probs=50.9
Q ss_pred cceEEEEcCC-CCcHHHHHHHHhC--CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-
Q 007805 308 VRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (589)
Q Consensus 308 ~~kI~IIG~G-~mG~~iA~~l~~~--G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (589)
.-||+|||+| .||...+..+.+. +++| .++|+++++.+...++ .+.....+|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM----------------------VGNPAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH----------------------HSSCEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH----------------------hCCCcccCCHH
Confidence 4589999999 8999999988876 4665 5889999887664221 1122445666
Q ss_pred cCC--CCCCEEEEeccCChH
Q 007805 383 SEF--KDVDMVIEAVIESVP 400 (589)
Q Consensus 383 ~~~--~~aDlVIeavpe~~~ 400 (589)
+.+ .+.|+|++|+|....
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGH
T ss_pred HHhcCCCCCEEEEeCCchHH
Confidence 334 368999999996543
No 390
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.82 E-value=0.011 Score=60.42 Aligned_cols=69 Identities=13% Similarity=0.163 Sum_probs=48.5
Q ss_pred cceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 308 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
..||+|||+|.||.. .+..+... +++|+ ++|+++++.+. . .......+|+ +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~~ 61 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------D------------WPAIPVVSDPQM 61 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------T------------CSSCCEESCHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------h------------CCCCceECCHHH
Confidence 358999999999997 67777665 67765 88999876431 0 1123455666 3
Q ss_pred CCC--CCCEEEEeccCChHH
Q 007805 384 EFK--DVDMVIEAVIESVPL 401 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~~ 401 (589)
.++ +.|+|++|+|.....
T Consensus 62 ll~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 62 LFNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp HHHCSSCCEEEECSCTTTHH
T ss_pred HhcCCCCCEEEEeCChHHHH
Confidence 343 589999999976653
No 391
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.81 E-value=0.0094 Score=58.45 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=53.6
Q ss_pred ceEEEEcCCC-CcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+++.|||.|. +|..+|..|...|..|++.++....++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 6899999876 699999999999999999986432221 34689
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
||+||-|++-.--++. +.+++++++++...
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (285)
T 3l07_A 205 ADILIVAVGKPNFITA-------DMVKEGAVVIDVGI 234 (285)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCcEEEEecc
Confidence 9999999973221222 35688998887654
No 392
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.81 E-value=0.01 Score=56.01 Aligned_cols=38 Identities=24% Similarity=0.240 Sum_probs=34.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (589)
+||.|+|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 36999997 999999999999999999999999887554
No 393
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.80 E-value=0.0053 Score=60.25 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=54.1
Q ss_pred ceEEEEcCCC-CcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
++|.|||.|. .|..+|..|...|..|+++++....+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 7899999996 599999999999999999986543322 33568
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+||-|++..--++. +.++++++|++....
T Consensus 203 ADIVI~Avg~p~lI~~-------~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPG-------DWIKEGAIVIDVGIN 233 (288)
T ss_dssp CSEEEECSCCTTCBCT-------TTSCTTCEEEECCCE
T ss_pred CCEEEECCCCcCcCCH-------HHcCCCcEEEEccCC
Confidence 9999999973221222 236888888876543
No 394
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.74 E-value=0.021 Score=55.39 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (589)
.+|.|||+|-+|+.++..|+..|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 589999999999999999999998 789998764
No 395
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.74 E-value=0.01 Score=61.06 Aligned_cols=70 Identities=13% Similarity=0.111 Sum_probs=48.0
Q ss_pred CccceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc
Q 007805 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (589)
+.+.||+|||+|.||.. .+..+... +++|+ ++|++++++.+ ........+++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~ 57 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------------------RYPQASIVRSF 57 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------------------TCTTSEEESCS
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------------------hCCCCceECCH
Confidence 34568999999999997 66666665 77775 88999765211 01123455666
Q ss_pred -cCCC--CCCEEEEeccCChH
Q 007805 383 -SEFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 383 -~~~~--~aDlVIeavpe~~~ 400 (589)
+.++ +.|+|++|+|....
T Consensus 58 ~~ll~~~~vD~V~i~tp~~~H 78 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNTPDNTH 78 (362)
T ss_dssp HHHHTCTTCCEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEEeCChHHH
Confidence 4444 48999999996554
No 396
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.73 E-value=0.014 Score=59.62 Aligned_cols=69 Identities=13% Similarity=0.039 Sum_probs=45.6
Q ss_pred ceEEEEcCCCCcHHHHHH-H-Hh-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 309 RKVAVIGGGLMGSGIATA-H-IL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~-l-~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
.||+|||+|.||..+... + .. .+++|+ ++|+++++.+.+ .+ ...+...+++ +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~-----------~~------------~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA-----------PI------------YSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS-----------GG------------GTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH-----------Hh------------cCCCceECCHHH
Confidence 589999999999874433 3 32 367776 899998754221 00 1223456666 4
Q ss_pred CCC--CCCEEEEeccCChH
Q 007805 384 EFK--DVDMVIEAVIESVP 400 (589)
Q Consensus 384 ~~~--~aDlVIeavpe~~~ 400 (589)
.++ +.|+|++|+|....
T Consensus 60 ll~~~~~D~V~i~tp~~~h 78 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSH 78 (345)
T ss_dssp HHTCTTEEEEEECSCGGGH
T ss_pred HhcCCCCCEEEEcCChHHH
Confidence 454 48999999996654
No 397
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.72 E-value=0.0033 Score=60.34 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=35.0
Q ss_pred CCccceEEEEc-CCCCcHHHHHHHHhCC-CeEEEEeCChHHHH
Q 007805 305 PRGVRKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLL 345 (589)
Q Consensus 305 ~~~~~kI~IIG-~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~ 345 (589)
+++|++|.|.| .|.+|..++..|++.| ++|++++|+++.++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~ 62 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH 62 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc
Confidence 45678999999 4999999999999999 89999999987643
No 398
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.70 E-value=0.0075 Score=60.50 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=34.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCC---hHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~~~~~~~ 347 (589)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++..
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~l 191 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAF 191 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHH
Confidence 689999999999999999999998 89999999 5555543
No 399
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.68 E-value=0.0052 Score=58.15 Aligned_cols=78 Identities=22% Similarity=0.215 Sum_probs=46.0
Q ss_pred ceEEEEcCCCCcHHHHHH--HHhCCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 309 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~--l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
.+|+|||+|.+|..++.. +...|++++ ++|.++++.... -.| . .+...+++ +.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~------------i~g----------v-~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTE------------VGG----------V-PVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCE------------ETT----------E-EEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhH------------hcC----------C-eeechhhHHHH
Confidence 569999999999999994 345578665 779998754321 000 0 11223444 34
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHH
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEK 411 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~ 411 (589)
+++.|.||+|+|. ...+++...+.+
T Consensus 143 i~~~D~ViIAvPs--~~~~ei~~~l~~ 167 (215)
T 2vt3_A 143 VKDESVAILTVPA--VAAQSITDRLVA 167 (215)
T ss_dssp CSSCCEEEECSCH--HHHHHHHHHHHH
T ss_pred HHhCCEEEEecCc--hhHHHHHHHHHH
Confidence 4444999999993 334456555543
No 400
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.68 E-value=0.015 Score=60.63 Aligned_cols=75 Identities=20% Similarity=0.178 Sum_probs=51.1
Q ss_pred CccceEEEEcCCC---CcHHHHHHHHhCC-CeEE--EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc
Q 007805 306 RGVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (589)
Q Consensus 306 ~~~~kI~IIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 379 (589)
|..-||||||+|. ||...+..+...+ ++|+ ++|+++++.+...++ .| + ......
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g-~---------~~~~~~ 69 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQ----------LG-V---------DSERCY 69 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHH----------TT-C---------CGGGBC
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH----------hC-C---------Ccceee
Confidence 3456899999999 9999988887765 6776 579999887664221 11 0 001345
Q ss_pred CCc-cCCC-------CCCEEEEeccCChH
Q 007805 380 LDY-SEFK-------DVDMVIEAVIESVP 400 (589)
Q Consensus 380 ~~~-~~~~-------~aDlVIeavpe~~~ 400 (589)
+|+ +.++ +.|+|++|+|....
T Consensus 70 ~~~~~ll~~~~~~~~~vD~V~i~tp~~~H 98 (398)
T 3dty_A 70 ADYLSMFEQEARRADGIQAVSIATPNGTH 98 (398)
T ss_dssp SSHHHHHHHHTTCTTCCSEEEEESCGGGH
T ss_pred CCHHHHHhcccccCCCCCEEEECCCcHHH
Confidence 565 3333 48999999996654
No 401
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.66 E-value=0.014 Score=54.88 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 346 (589)
+||.|+|+ |.+|+.++..|++.|++|++.+|++++++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 37999995 999999999999999999999999887554
No 402
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.65 E-value=0.037 Score=55.91 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCC-------eEEEEeCCh
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~ 341 (589)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 58999997 9999999999999996 899999975
No 403
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.64 E-value=0.037 Score=59.07 Aligned_cols=74 Identities=22% Similarity=0.147 Sum_probs=51.1
Q ss_pred CccceEEEEcC----CCCcHHHHHHHHhC--CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 007805 306 RGVRKVAVIGG----GLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (589)
Q Consensus 306 ~~~~kI~IIG~----G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (589)
|...||+|||+ |.||...+..+... +++|+ ++|+++++.+...++ .| + .....
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~----------~g-~---------~~~~~ 96 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQ----------LQ-L---------KHATG 96 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHH----------TT-C---------TTCEE
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cC-C---------Cccee
Confidence 44468999999 99999999998875 67764 889999887664221 01 0 01134
Q ss_pred cCCc-cCC--CCCCEEEEeccCCh
Q 007805 379 VLDY-SEF--KDVDMVIEAVIESV 399 (589)
Q Consensus 379 ~~~~-~~~--~~aDlVIeavpe~~ 399 (589)
.+++ +.+ .+.|+|++|+|...
T Consensus 97 ~~d~~ell~~~~vD~V~I~tp~~~ 120 (479)
T 2nvw_A 97 FDSLESFAQYKDIDMIVVSVKVPE 120 (479)
T ss_dssp ESCHHHHHHCTTCSEEEECSCHHH
T ss_pred eCCHHHHhcCCCCCEEEEcCCcHH
Confidence 5566 334 37999999999444
No 404
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.63 E-value=0.0089 Score=58.45 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=53.5
Q ss_pred ceEEEEcCCCC-cHHHHHHHHhC--CCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 309 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 309 ~kI~IIG~G~m-G~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
+++.|||.|.| |..+|..|... |..|++.+++...+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 68999999976 99999999999 889999976543222 446
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (589)
++||+||-|++-.--++. +.+++++++++...
T Consensus 202 ~~ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTA-------DMVRPGAAVIDVGV 233 (281)
T ss_dssp TTCSEEEECSCCTTCBCG-------GGSCTTCEEEECCE
T ss_pred hhCCEEEECCCCCcccCH-------HHcCCCcEEEEccC
Confidence 899999999963221222 23678888887554
No 405
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.51 E-value=0.011 Score=57.81 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=53.4
Q ss_pred ceEEEEcCCC-CcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCCC
Q 007805 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (589)
Q Consensus 309 ~kI~IIG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (589)
+++.|||.|. .|.++|..|...|..|++..+....++ +.+++
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 6899999865 799999999999999999976432221 33678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
||+||-+++-.--++. +.++++++|++..+.
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVKG-------EWIKEGAIVIDVGIN 235 (286)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCSC
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCeEEEEeccc
Confidence 9999999973221222 356888888776543
No 406
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.50 E-value=0.047 Score=57.58 Aligned_cols=72 Identities=17% Similarity=0.093 Sum_probs=50.3
Q ss_pred cceEEEEcC----CCCcHHHHHHHHhC--CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 308 VRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 308 ~~kI~IIG~----G~mG~~iA~~l~~~--G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
..||+|||+ |.||...+..+.+. +++| .++|+++++.+...++ .| + ..+...+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~---------~~~~~~~ 79 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQR----------LK-L---------SNATAFP 79 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------TT-C---------TTCEEES
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cC-C---------CcceeeC
Confidence 458999999 99999999999886 6776 5899999887654221 01 0 0122455
Q ss_pred Cc-cCCC--CCCEEEEeccCCh
Q 007805 381 DY-SEFK--DVDMVIEAVIESV 399 (589)
Q Consensus 381 ~~-~~~~--~aDlVIeavpe~~ 399 (589)
++ +.++ +.|+|++|+|...
T Consensus 80 ~~~~ll~~~~vD~V~i~tp~~~ 101 (438)
T 3btv_A 80 TLESFASSSTIDMIVIAIQVAS 101 (438)
T ss_dssp SHHHHHHCSSCSEEEECSCHHH
T ss_pred CHHHHhcCCCCCEEEEeCCcHH
Confidence 66 3343 6899999999444
No 407
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.47 E-value=0.073 Score=52.70 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=62.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHh-CCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc-CCccC--
Q 007805 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSE-- 384 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~-- 384 (589)
.+|..||+|..|.+... +++ .|.+|+.+|++++.++.|++.+... |. .++++. .|...
T Consensus 124 ~rVLDIGcG~G~~ta~~-lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGIL-LSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVID 185 (298)
T ss_dssp CEEEEECCCSSCHHHHH-HHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGGG
T ss_pred CEEEEECCCccHHHHHH-HHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhCC
Confidence 68999999997644332 343 5889999999999999987654321 10 122221 11111
Q ss_pred CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEec
Q 007805 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (589)
-...|+|+.+.. ..-+..+++++...++|+..++..
T Consensus 186 d~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 186 GLEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GCCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 246799997654 344668999999999998877643
No 408
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.46 E-value=0.012 Score=61.54 Aligned_cols=70 Identities=20% Similarity=0.189 Sum_probs=49.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC---------CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 007805 309 RKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (589)
-||||||+|.||...+..+.+. +.+|+ ++|++++++++..++ .+....
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~----------------------~~~~~~ 84 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAK----------------------LGAEKA 84 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHH----------------------HTCSEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHH----------------------cCCCeE
Confidence 3799999999999888887754 34554 789999988775332 122234
Q ss_pred cCCc-cCC--CCCCEEEEeccCChH
Q 007805 379 VLDY-SEF--KDVDMVIEAVIESVP 400 (589)
Q Consensus 379 ~~~~-~~~--~~aDlVIeavpe~~~ 400 (589)
.+|+ +.+ .+.|+|++|+|....
T Consensus 85 y~d~~~ll~~~~vD~V~I~tp~~~H 109 (412)
T 4gqa_A 85 YGDWRELVNDPQVDVVDITSPNHLH 109 (412)
T ss_dssp ESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred ECCHHHHhcCCCCCEEEECCCcHHH
Confidence 5666 334 468999999996554
No 409
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.46 E-value=0.0056 Score=58.05 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.9
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 344 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 344 (589)
|++|.|+|+ |.+|+.++..|++.|++|++.+++++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999995 9999999999999999999999998754
No 410
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.43 E-value=0.044 Score=58.72 Aligned_cols=72 Identities=18% Similarity=0.206 Sum_probs=48.7
Q ss_pred CccceEEEEcCCCCcHH-HHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccC
Q 007805 306 RGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (589)
Q Consensus 306 ~~~~kI~IIG~G~mG~~-iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (589)
..+++|.|||.|-.|.+ +|..|.+.|++|+++|.++..... .+.+.|. .+....+.+.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~----------~l~~~gi-----------~~~~g~~~~~ 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQ----------HLTALGA-----------QIYFHHRPEN 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHH----------HHHHTTC-----------EEESSCCGGG
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHH----------HHHHCCC-----------EEECCCCHHH
Confidence 35789999999999996 999999999999999987543211 1112221 1222234456
Q ss_pred CCCCCEEEEe--ccCC
Q 007805 385 FKDVDMVIEA--VIES 398 (589)
Q Consensus 385 ~~~aDlVIea--vpe~ 398 (589)
+.++|+||.+ +|.+
T Consensus 79 ~~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 79 VLDASVVVVSTAISAD 94 (494)
T ss_dssp GTTCSEEEECTTSCTT
T ss_pred cCCCCEEEECCCCCCC
Confidence 7889999975 5543
No 411
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=95.42 E-value=0.3 Score=52.77 Aligned_cols=163 Identities=13% Similarity=0.054 Sum_probs=93.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEE
Q 007805 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (589)
Q Consensus 25 ~N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaa 104 (589)
.-++.+...+.+.++++.+.+. .+-+|.|.-.|+ +.+.+-..... ....+.+.+.+. ..+.....|+|++
T Consensus 119 gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgG-----Arl~~qe~~~~--~l~~~g~if~~~--~~ls~~~iP~Isv 188 (588)
T 3gf3_A 119 AGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSG-----VEFPNQDKVYP--NRRGGGTPFFRN--SELNQLGIPVIVG 188 (588)
T ss_dssp GGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGHHHHSS--STTSTTHHHHHH--HHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCC-----cCccccccccc--chhhHHHHHHHH--HHHhcCCCCEEEE
Confidence 3789999999999999988765 355677765443 44421111100 011122222222 2356678999999
Q ss_pred eCCcccchhhHHhhhcCEEEEeCCceEeccccc--cCCCCChhhhhhHhhh---cCHHHHHHHHHcCCCCCHHHHH--Hc
Q 007805 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELT--LGVIPGFGGTQRLPRL---VGLSKAIEMMLLSKSITSEEGW--KL 177 (589)
Q Consensus 105 v~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~--~Gl~p~~g~~~~l~~~---~G~~~a~~l~ltg~~~~a~~A~--~~ 177 (589)
|-|.|.|||...++++|++++.+++.+++.-.. -|+-|. | .. .+.- +......+-..+.+.+.+.+.+ ..
T Consensus 189 v~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~-g-~~-~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~s 265 (588)
T 3gf3_A 189 IYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPK-G-YI-DDEAAEQIIAAQIENSKLKVPAPGSVPIHYDET 265 (588)
T ss_dssp ECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTS
T ss_pred EeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCcc-c-cc-cccchhhhhhhhccccccChhhccchhhhcccc
Confidence 999999999877888898898899988774332 121111 0 00 1110 0001111112466777777777 47
Q ss_pred CCcceecCchH-HHHHHHHHHHHH
Q 007805 178 GLIDAVVTSEE-LLKVSRLWALDI 200 (589)
Q Consensus 178 Glv~~vv~~~~-l~~~a~~~a~~l 200 (589)
|++|.++++|+ ..+.++++..-+
T Consensus 266 Gv~d~~a~de~~al~~~r~~ls~L 289 (588)
T 3gf3_A 266 GFFREVYQNDLGVIDGIKKYISYL 289 (588)
T ss_dssp CCSCEEESSHHHHHHHHHHHHHTS
T ss_pred ccceEEeCCHHHHHHHHHHHHHhC
Confidence 99999997663 444444444433
No 412
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.28 E-value=0.024 Score=58.41 Aligned_cols=67 Identities=15% Similarity=0.075 Sum_probs=47.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC--CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
.||+|||+| +|.--+..+.+. +++++ ++|+++++.+...++ . .+...+|+ +.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~----------------------~-gv~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA----------------------F-GIPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH----------------------T-TCCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH----------------------h-CCCEECCHHHH
Confidence 589999999 798777777654 56766 789999887664221 1 23455677 56
Q ss_pred CCCCCEEEEeccCCh
Q 007805 385 FKDVDMVIEAVIESV 399 (589)
Q Consensus 385 ~~~aDlVIeavpe~~ 399 (589)
+++.|+|++|+|...
T Consensus 64 ~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 64 TGMPDIACIVVRSTV 78 (372)
T ss_dssp CSCCSEEEECCC--C
T ss_pred hcCCCEEEEECCCcc
Confidence 788999999998654
No 413
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=95.18 E-value=0.31 Score=52.18 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=100.4
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCC
Q 007805 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (589)
Q Consensus 21 ~~p~~--N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (589)
|+|.. -.++++-.+...+.++.++.. .+-.|.|-=. +.|..|.+-+.. ...+....++ ..+.+..
T Consensus 333 n~~~~~~G~~~~~~a~Kaar~i~~~~~~-~iPlv~lvDt-pGf~~G~~~E~~----------Gi~~~~A~~l-~a~a~~~ 399 (523)
T 1on3_A 333 NQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQEYG----------GIIRHGAKML-YAYSEAT 399 (523)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHCC
T ss_pred ecCCccCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeC-CCcCcchHHHHh----------hHHHHHHHHH-HHHhcCC
Confidence 45542 589999999999999888653 4555555322 345555543221 1122233445 5688999
Q ss_pred CcEEEEeCCcccchhhHHhhh----cCEEEEeCCceEeccccccCCCCChhhhhhHhhhc-----CHHHHHH-HHH--cC
Q 007805 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MML--LS 166 (589)
Q Consensus 99 kp~iaav~G~a~GgG~~lala----~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~-----G~~~a~~-l~l--tg 166 (589)
.|+|+.|-|.+.|||..-... +|+++|.++++++ .++.-|....+-+.- -....++ +.- .-
T Consensus 400 vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 472 (523)
T 1on3_A 400 VPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQN 472 (523)
T ss_dssp SCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999999888754433 7888777776665 444445444443321 1111111 211 11
Q ss_pred CCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHh
Q 007805 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 202 (589)
Q Consensus 167 ~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (589)
+.-++..+.+.|+||+|+++.+.........+.+..
T Consensus 473 ~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~~ 508 (523)
T 1on3_A 473 AFNTPYVAAARGQVDDVIDPADTRRKIASALEMYAT 508 (523)
T ss_dssp HHSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHGGG
T ss_pred hhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHHHHhc
Confidence 125678899999999999998877665555555443
No 414
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.14 E-value=0.022 Score=57.70 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=28.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeEEEE-eC--ChHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EV--NSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V~~~-d~--~~~~~~~ 346 (589)
.||||+|+|.||.-+++.+.++ +++|+.+ |. +++.+..
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ 45 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTY 45 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHH
Confidence 5899999999999999998876 5666544 42 4454444
No 415
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.13 E-value=0.026 Score=57.16 Aligned_cols=101 Identities=17% Similarity=0.216 Sum_probs=60.2
Q ss_pred ccceEEEEcC-CCCcHHHHHHHHhC-CCeEEEEeCCh---HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC-
Q 007805 307 GVRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL- 380 (589)
Q Consensus 307 ~~~kI~IIG~-G~mG~~iA~~l~~~-G~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~- 380 (589)
.|.||+|+|+ |.+|..+...|..+ .+++..+..+. +.-+.. ...+..+ .|.. .+....
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~----~~~~p~~--~~~~----------~~~v~~~ 66 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI----SDLHPQL--KGIV----------ELPLQPM 66 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH----HHHCGGG--TTTC----------CCBEEEE
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch----HHhCccc--cCcc----------ceeEecc
Confidence 3589999995 99999999999885 56777665433 211110 0000000 0100 122222
Q ss_pred -CccCC-CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCH
Q 007805 381 -DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (589)
Q Consensus 381 -~~~~~-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~ 428 (589)
+.+.+ +++|+||+|+| ...-+++..++ +..++.++++++....
T Consensus 67 ~~~~~~~~~~Dvvf~a~p--~~~s~~~~~~~---~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 67 SDISEFSPGVDVVFLATA--HEVSHDLAPQF---LEAGCVVFDLSGAFRV 111 (337)
T ss_dssp SSGGGTCTTCSEEEECSC--HHHHHHHHHHH---HHTTCEEEECSSTTSS
T ss_pred CCHHHHhcCCCEEEECCC--hHHHHHHHHHH---HHCCCEEEEcCCcccc
Confidence 34445 89999999998 44444554444 3467888899987644
No 416
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.10 E-value=0.11 Score=52.18 Aligned_cols=40 Identities=18% Similarity=0.104 Sum_probs=35.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 347 (589)
-++|.|.|+ |.+|+.++..|++.|++|++.+++++..+..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 468999997 9999999999999999999999998765543
No 417
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.08 E-value=0.023 Score=48.55 Aligned_cols=81 Identities=9% Similarity=-0.008 Sum_probs=57.6
Q ss_pred cceEEEEcC----CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCcc
Q 007805 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (589)
Q Consensus 308 ~~kI~IIG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (589)
.++|+|||+ +..|..+...|.+.||+|+.++...+.+ .......+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 478999998 5678999999999999988888653321 1234455565
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEE
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (589)
++.+.|+++.++| .+...++++++.+. ....+|.
T Consensus 55 dlp~vDlavi~~p--~~~v~~~v~e~~~~-g~k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYIN--PQNQLSEYNYILSL-KPKRVIF 88 (122)
T ss_dssp CCTTCCEEEECSC--HHHHGGGHHHHHHH-CCSEEEE
T ss_pred HCCCCCEEEEEeC--HHHHHHHHHHHHhc-CCCEEEE
Confidence 5544999999998 66666778876654 2335554
No 418
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=95.04 E-value=0.17 Score=54.88 Aligned_cols=157 Identities=11% Similarity=0.121 Sum_probs=101.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEe
Q 007805 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (589)
Q Consensus 26 N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav 105 (589)
-.++++-.....+.++.++. ..+-+|.|.=. +.|..|.+-++ ....+....++ .++.....|+|+.|
T Consensus 385 G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gA~~~-~a~a~a~vP~itvI 451 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT-TGIDVGNDAEK----------AELLGLGQSLI-YSIQTSHIPQFEIT 451 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHH-TTCCEEEEECC-CEECCSHHHHH----------TTHHHHHHHHH-HHHHTCCCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC-CCCCCcHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 47999999999999987765 35666666433 34555554221 11223333555 67899999999999
Q ss_pred CCcccchhhHHhhh-----c--CEEEEeCCceEeccccccCCCCChhhhhhHhhh-cCH---------HHH---HHHH--
Q 007805 106 EGLALGGGLELAMG-----C--HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL---------SKA---IEMM-- 163 (589)
Q Consensus 106 ~G~a~GgG~~lala-----~--D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~-~G~---------~~a---~~l~-- 163 (589)
-|.+.|||. ++++ + |+++|.++++++ .+++-|....+-+. .-. ..+ .++.
T Consensus 452 ~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 523 (587)
T 1pix_A 452 LRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQA 523 (587)
T ss_dssp CSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHH
Confidence 999998884 5554 4 998888877776 44434444333322 110 000 0110
Q ss_pred HcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcC
Q 007805 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (589)
Q Consensus 164 ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (589)
+. +..++..|.+.|+||.|+++.+.........+.+...+
T Consensus 524 y~-~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 524 FY-TKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp HH-HTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred HH-HhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence 11 14889999999999999999888776666666665554
No 419
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.02 E-value=0.024 Score=56.11 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
+||.|.|+ |.+|+.++..|.+.||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999997 99999999999999999999999864
No 420
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.02 E-value=0.024 Score=57.50 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=29.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLK 346 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~ 346 (589)
.||||+|+|.||..++..+.++ +++|+ +.|++++...+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~ 41 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEAR 41 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHH
Confidence 5899999999999999999874 56664 46777655443
No 421
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.98 E-value=0.037 Score=54.79 Aligned_cols=41 Identities=20% Similarity=0.116 Sum_probs=36.4
Q ss_pred ceEEEEc-CCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
++|.|+| +|-+|.+++..|++.|.+|++++|++++.+...+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 6799999 8999999999999999999999999887766543
No 422
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=94.93 E-value=0.24 Score=52.99 Aligned_cols=163 Identities=16% Similarity=0.216 Sum_probs=101.2
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHH
Q 007805 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (589)
Q Consensus 18 i~l~~p~~--N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (589)
|.=|+|.. -.++++..+...+.++.+++. .+-.|.|.=.+ .|..|.+-+. ....+..-.++ .++.
T Consensus 336 vian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~E~----------~gi~~~~Ak~l-~a~a 402 (530)
T 3iav_A 336 IVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQEH----------DGIIRRGAKLI-FAYA 402 (530)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC-CCCccHHHHH----------hhHHHHHHHHH-HHHH
Confidence 34456653 589999999999999888764 45566664332 2666655321 11223333555 6788
Q ss_pred hCCCcEEEEeCCcccchhhHHhhh-----cCEEEEeCCceEeccccccCCCCChhhhhhHhhh-cC------HHHHHHHH
Q 007805 96 DCKKPIVAAVEGLALGGGLELAMG-----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VG------LSKAIEMM 163 (589)
Q Consensus 96 ~~~kp~iaav~G~a~GgG~~lala-----~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~-~G------~~~a~~l~ 163 (589)
....|+|+.|-|.++|||. ++++ .|+++|.++++++ .+++-|....+-+. +- ...-.++.
T Consensus 403 ~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~-------Vm~~egaa~il~r~~~~~~~~d~~~~~~~~~ 474 (530)
T 3iav_A 403 EATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIA-------VMGAQGAVNILHRRTIADAGDDAEATRARLI 474 (530)
T ss_dssp HCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTSTTTSTTCTTCHHHHHHHH
T ss_pred hCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEe-------cCCHHHHHHHHhhhhhhhcccCHHHHHHHHH
Confidence 9999999999999998776 4444 6998888887766 44333433333221 11 01111111
Q ss_pred --HcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHH
Q 007805 164 --LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (589)
Q Consensus 164 --ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la 201 (589)
+.-+..++..|.+.|+||.|+++.+.........+.+.
T Consensus 475 ~~y~~~~~~p~~aa~~~~vD~VIdP~~TR~~l~~~l~~~~ 514 (530)
T 3iav_A 475 QEYEDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQLR 514 (530)
T ss_dssp HHHHHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred HHHHHhcCCHHHHHhcCCCCcccCHHHHHHHHHHHHHHHh
Confidence 11123477788899999999999887765554444433
No 423
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.90 E-value=0.041 Score=55.17 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=28.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHh-C-CCeE-EEEeCChHH
Q 007805 308 VRKVAVIGGGLMGSGIATAHIL-N-NIYV-VLKEVNSEY 343 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~-~-G~~V-~~~d~~~~~ 343 (589)
..||+|||+|.||..++..+.+ . +.++ .++|+++++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 3589999999999999998865 3 5554 578999776
No 424
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=94.90 E-value=0.039 Score=55.97 Aligned_cols=86 Identities=14% Similarity=0.160 Sum_probs=50.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHH-hhcccccCCc-cC
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA-LKMLKGVLDY-SE 384 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~i~~~~~~-~~ 384 (589)
.||||+|+|.||..++..+... +.+| .+.|++++.+....++.. + --.+.+. ...... -..+....++ +.
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g--~---~~~~~~~-~~v~~~~~~~~~v~~d~~~l 76 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELG--I---PVYAASE-EFIPRFEKEGFEVAGTLNDL 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTT--C---CEEESSG-GGHHHHHHHTCCCSCBHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcC--c---ccccccc-ccceeccCCceEEcCcHHHh
Confidence 5899999999999999998876 4565 466888776654322100 0 0000000 000000 0122334455 34
Q ss_pred CCCCCEEEEeccCChH
Q 007805 385 FKDVDMVIEAVIESVP 400 (589)
Q Consensus 385 ~~~aDlVIeavpe~~~ 400 (589)
+.++|+|++|.|....
T Consensus 77 ~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 77 LEKVDIIVDATPGGIG 92 (334)
T ss_dssp HTTCSEEEECCSTTHH
T ss_pred ccCCCEEEECCCcccc
Confidence 5689999999996654
No 425
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.79 E-value=0.018 Score=58.26 Aligned_cols=179 Identities=13% Similarity=0.095 Sum_probs=91.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCC---------CeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc
Q 007805 309 RKVAVIGGGLMGSGIATAHILNN---------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G---------~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (589)
-||+|||+|.||+.++..+.+.. .+| .++|+++++.+ + +. ...+
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~----------------~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR----------------A-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC----------------S-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh----------------c-cC---------cccc
Confidence 57999999999999999988763 454 46788754311 1 11 1134
Q ss_pred cCCc-cCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCc-EEEecCCCC--CHHHHhcccCCCCcEEEecCCCCCCCCC
Q 007805 379 VLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTI--DLNIVGEKTSSQDRIIGAHFFSPAHVMP 454 (589)
Q Consensus 379 ~~~~-~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~--~~~~~~~~~~~~~r~ig~h~~~p~~~~~ 454 (589)
++|+ +.+ +.|+|++|+|..... .++..+ .+..+. +++.|...+ ...++.+..... ...|...
T Consensus 58 ~~d~~~ll-~iDvVve~t~~~~~a-~~~~~~---AL~aGKhVVtaNkkpla~~~~eL~~~A~~~-----~~~~Ea~---- 123 (332)
T 2ejw_A 58 RAEPFDLL-EADLVVEAMGGVEAP-LRLVLP---ALEAGIPLITANKALLAEAWESLRPFAEEG-----LIYHEAS---- 123 (332)
T ss_dssp ESSCCCCT-TCSEEEECCCCSHHH-HHHHHH---HHHTTCCEEECCHHHHHHSHHHHHHHHHTT-----CEECGGG----
T ss_pred cCCHHHHh-CCCEEEECCCCcHHH-HHHHHH---HHHcCCeEEECCchhHHHHHHHHHHHHHhC-----CeEEEEE----
Confidence 5666 445 999999999855322 222222 222333 444343221 122333322221 1112211
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCCCHHHHHHHHHhcCC-CCcHHH
Q 007805 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL-PIGPFQ 533 (589)
Q Consensus 455 lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv~~~~iD~~~~~~g~-p~Gpf~ 533 (589)
.+...+ .++.++ .+ -|-.+..+.- |.|-...-++++ .++|.+.+++-.-....|| ..+|
T Consensus 124 -----vg~giP--ii~~l~-~l--~~~~I~~I~g----I~nGT~nyil~~----m~~g~~f~~~l~eAq~~GyaE~dP-- 183 (332)
T 2ejw_A 124 -----VMAGTP--ALSFLE-TL--RGSELLELHG----ILNGTTLYILQE----MEKGRTYAEALLEAQRLGYAEADP-- 183 (332)
T ss_dssp -----TTTTSS--SHHHHH-HH--TTSEEEEEEE----ECCHHHHHHHHH----HHTTCCHHHHHHHHHHTTSSCSSC--
T ss_pred -----cccCCH--HHHHHH-Hh--cCCCcceEEE----EEecccccccCc----cccCCCHHHHHHHHHHCCCCCCCC--
Confidence 111111 234444 22 2222222211 233332222222 2388888887555566777 3567
Q ss_pred HHHHhchHHHHHHH
Q 007805 534 LLDLAGYGVAAATS 547 (589)
Q Consensus 534 ~~D~~Gld~~~~~~ 547 (589)
..|.-|.|...++.
T Consensus 184 ~~Dv~G~d~a~Kl~ 197 (332)
T 2ejw_A 184 TLDVEGIDAAHKLT 197 (332)
T ss_dssp HHHHTTHHHHHHHH
T ss_pred ccccCchhHHHHHH
Confidence 88999999877643
No 426
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.75 E-value=0.038 Score=54.48 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=59.0
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-c
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (589)
+.||+|+| +|.||..++..+.+. +++++ ++|++++...- .. ...+...+ ...+..++|+ +
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G--~d----~gel~G~~----------~~gv~v~~dl~~ 84 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD--KD----ASILIGSD----------FLGVRITDDPES 84 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT--SB----GGGGTTCS----------CCSCBCBSCHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc--cc----hHHhhccC----------cCCceeeCCHHH
Confidence 35899999 899999999998764 67755 55886432100 00 00000000 0124456677 4
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~ 429 (589)
.+.++|+||++.+ ++.. +..+...+..+.-+++.|++++.+
T Consensus 85 ll~~aDVvIDFT~--p~a~---~~~~~~~l~~Gv~vViGTTG~~~e 125 (288)
T 3ijp_A 85 AFSNTEGILDFSQ--PQAS---VLYANYAAQKSLIHIIGTTGFSKT 125 (288)
T ss_dssp HTTSCSEEEECSC--HHHH---HHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HhcCCCEEEEcCC--HHHH---HHHHHHHHHcCCCEEEECCCCCHH
Confidence 5789999999886 4432 333333344455556666677654
No 427
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=94.74 E-value=0.015 Score=58.81 Aligned_cols=197 Identities=16% Similarity=0.094 Sum_probs=93.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC---------CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccc
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 377 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 377 (589)
|-||+|||+|.||+.++..+.+. +++|+ ++|++++..+.. ...+.+......+ .
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~i--d~~~~~~~~~~~~--------------~ 65 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDF--SLVEALRMKRETG--------------M 65 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSC--CHHHHHHHHHHHS--------------S
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhcccc--CHHHHHhhhccCc--------------c
Confidence 46899999999999999998875 45554 667775442210 0000000000001 1
Q ss_pred cc--CCc-cCC--CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEE-ecCCCCC--HHHHhcccCCC-CcEEEecCCC
Q 007805 378 GV--LDY-SEF--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA-TNTSTID--LNIVGEKTSSQ-DRIIGAHFFS 448 (589)
Q Consensus 378 ~~--~~~-~~~--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~-s~ts~~~--~~~~~~~~~~~-~r~ig~h~~~ 448 (589)
.+ .|+ +.+ .+.|+|++|+|.+..... .+..+...+..+.-++ .|...+. ..++.+..... .++. |.
T Consensus 66 ~~~~~d~~~ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~----~e 140 (327)
T 3do5_A 66 LRDDAKAIEVVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLM----YE 140 (327)
T ss_dssp CSBCCCHHHHHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEE----CG
T ss_pred ccCCCCHHHHhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEE----EE
Confidence 22 244 223 468999999997653211 2233344455555444 4443222 12333222211 1111 11
Q ss_pred CCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCcccccccHHHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 007805 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 528 (589)
Q Consensus 449 p~~~~~lveiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~Gfi~nRi~~~~~~Ea~~l~~~Gv~~~~iD~~~~~~g~p 528 (589)
. ..+ .+ . -.+..+++++. |-++..+.- |.|-...-+++ +|-++|.+.+++=+-....||.
T Consensus 141 a-~v~------~g--~--Pii~~l~~~l~--~~~I~~I~G----IlnGT~nyilt---~m~~~g~~f~~~l~~Aq~~Gya 200 (327)
T 3do5_A 141 A-TVG------GA--M--PVVKLAKRYLA--LCEIESVKG----IFNGTCNYILS---RMEEERLPYEHILKEAQELGYA 200 (327)
T ss_dssp G-GSS------TT--S--CCHHHHHTTTT--TSCEEEEEE----ECCHHHHHHHH---HHHHHCCCHHHHHHHHHHTTSS
T ss_pred E-Eee------ec--C--HHHHHHHHHhh--CCCccEEEE----EECCCcCcchh---hcCcCCcCHHHHHHHHHHcCCC
Confidence 1 000 00 0 01234444432 222222211 22222111111 3346799988876666666663
Q ss_pred -CcHHHHHHHhchHHHHHHH
Q 007805 529 -IGPFQLLDLAGYGVAAATS 547 (589)
Q Consensus 529 -~Gpf~~~D~~Gld~~~~~~ 547 (589)
.=| ..|.-|+|...++.
T Consensus 201 E~DP--~~Dv~G~D~a~Kl~ 218 (327)
T 3do5_A 201 EADP--SYDVEGIDAALKLV 218 (327)
T ss_dssp CSSC--HHHHTSHHHHHHHH
T ss_pred CCCc--hhhcCChhHHHHHH
Confidence 222 68999999988743
No 428
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.72 E-value=0.039 Score=55.90 Aligned_cols=39 Identities=23% Similarity=0.358 Sum_probs=29.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeC--ChHHHHH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEV--NSEYLLK 346 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~--~~~~~~~ 346 (589)
+.||||+|+|.+|..+++.+..+ +++|+ +.|+ +++.+..
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~ 45 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVY 45 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHH
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHH
Confidence 35899999999999999998775 57766 4453 5665544
No 429
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=94.70 E-value=0.03 Score=57.81 Aligned_cols=70 Identities=21% Similarity=0.217 Sum_probs=45.2
Q ss_pred eEEEEcCCCCcHHHHHHHHh--------CCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 310 KVAVIGGGLMGSGIATAHIL--------NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~--------~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
||||||+|.||..-+..+.. .+.+| .++|+++++++...++ .+.-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----------------------FGFEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCeecC
Confidence 79999999999876655432 14555 4889999887764332 12223556
Q ss_pred Cc-cCC--CCCCEEEEeccCChHH
Q 007805 381 DY-SEF--KDVDMVIEAVIESVPL 401 (589)
Q Consensus 381 ~~-~~~--~~aDlVIeavpe~~~~ 401 (589)
|+ +.+ .+.|+|++|+|.....
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 66 334 4689999999966543
No 430
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=94.68 E-value=0.44 Score=51.20 Aligned_cols=160 Identities=16% Similarity=0.155 Sum_probs=97.5
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCC
Q 007805 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (589)
Q Consensus 21 ~~p~~--N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (589)
|+|.. -+++++-.+...+.++.+++. .+-.|.|-=. +.|..|.+-++. ...+.....+ ..+.+..
T Consensus 354 n~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~~----------Gi~~~ga~~l-~a~~~~~ 420 (548)
T 2bzr_A 354 NQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEYN----------GIIRRGAKLL-YAYGEAT 420 (548)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHCC
T ss_pred ECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHHh----------hHHHHHHHHH-HHHhCCC
Confidence 45542 589999999999999988754 4555555322 335555543221 1122233445 5688899
Q ss_pred CcEEEEeCCcccchhhHHh----hhcCEEEEeCCceEeccccccCCCCChhhhhhHhhh-cCH------H--HHHH-HHH
Q 007805 99 KPIVAAVEGLALGGGLELA----MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL------S--KAIE-MML 164 (589)
Q Consensus 99 kp~iaav~G~a~GgG~~la----la~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~-~G~------~--~a~~-l~l 164 (589)
.|+|+.|-|.|.|||.--. +.+|+++|.++++++ .+++-|....+-+. +-. . ..+. +.-
T Consensus 421 VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~ 493 (548)
T 2bzr_A 421 VPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQ 493 (548)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTCCC----------CHHHHHHHHH
T ss_pred CCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHH
Confidence 9999999999999887543 348998888887766 44434444444332 110 0 1111 211
Q ss_pred --cCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHH
Q 007805 165 --LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI 200 (589)
Q Consensus 165 --tg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~l 200 (589)
.-..-++..+.+.|+||.|+++.+.........+.+
T Consensus 494 ~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l 531 (548)
T 2bzr_A 494 EYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRLL 531 (548)
T ss_dssp HHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHHT
T ss_pred HHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHHH
Confidence 111245677999999999999987765554444443
No 431
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.65 E-value=0.023 Score=58.52 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=48.4
Q ss_pred eEEEEcCCCCcHHHHHHHHhCC--------CeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC
Q 007805 310 KVAVIGGGLMGSGIATAHILNN--------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G--------~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (589)
||||||+|.||..-+..+.... .+| .++|+++++++...++ .+.-...+
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~----------------------~g~~~~~~ 65 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGK----------------------LGWSTTET 65 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHH----------------------cCCCcccC
Confidence 7999999999998877766531 244 5889999987765331 12224556
Q ss_pred Cc-cCC--CCCCEEEEeccCChHH
Q 007805 381 DY-SEF--KDVDMVIEAVIESVPL 401 (589)
Q Consensus 381 ~~-~~~--~~aDlVIeavpe~~~~ 401 (589)
|+ +.+ .+.|+|++|+|.....
T Consensus 66 d~~~ll~~~~iDaV~I~tP~~~H~ 89 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTPGDSHA 89 (390)
T ss_dssp CHHHHTTCTTCSEEEECSCGGGHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHH
Confidence 66 444 4689999999966543
No 432
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.64 E-value=0.091 Score=49.24 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.2
Q ss_pred eEEEEc-CCCCcHHHHHHHHhCCCeEEEEeCChHHH
Q 007805 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYL 344 (589)
Q Consensus 310 kI~IIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 344 (589)
||.|+| .|.+|..++..|++.|++|++.+|+++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 799999 59999999999999999999999998754
No 433
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.62 E-value=0.039 Score=55.16 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 568999996 9999999999999999999999986
No 434
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.57 E-value=0.12 Score=54.70 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
-+||.|||.|..|.+.|..|.+.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 47899999999999999999999999999999653
No 435
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.55 E-value=0.034 Score=55.16 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 467999997 9999999999999999999999986
No 436
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.50 E-value=0.026 Score=56.39 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=32.0
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 358999996 99999999999999999999999875
No 437
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.42 E-value=0.019 Score=54.73 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.1
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
.|+|||+|.-|.+.|..|+++|++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999999999999764
No 438
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=94.38 E-value=0.036 Score=55.61 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=30.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeE-EEEeCChHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 343 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V-~~~d~~~~~ 343 (589)
|.||+|||+ |.||...+..+...+.+| .++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV 40 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 578999999 789999999999888765 588998775
No 439
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.36 E-value=0.055 Score=54.82 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=31.4
Q ss_pred CccceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 306 RGVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 306 ~~~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
|..++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44578999998 9999999999999999999999976
No 440
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.35 E-value=0.024 Score=58.60 Aligned_cols=72 Identities=17% Similarity=0.145 Sum_probs=48.1
Q ss_pred ccceEEEEc-CCCCcHH-HH----HHHHhCC-CeE----------EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHH
Q 007805 307 GVRKVAVIG-GGLMGSG-IA----TAHILNN-IYV----------VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369 (589)
Q Consensus 307 ~~~kI~IIG-~G~mG~~-iA----~~l~~~G-~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 369 (589)
...||+||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+...++
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~------------------- 65 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKR------------------- 65 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHH-------------------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHH-------------------
Confidence 345799999 9999998 66 6666543 332 4999999987764221
Q ss_pred HHHhhcccccCCc-cCC--CCCCEEEEeccCChH
Q 007805 370 NNALKMLKGVLDY-SEF--KDVDMVIEAVIESVP 400 (589)
Q Consensus 370 ~~~~~~i~~~~~~-~~~--~~aDlVIeavpe~~~ 400 (589)
.+.-...+|+ +.+ .+.|+|++|+|....
T Consensus 66 ---~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h 96 (383)
T 3oqb_A 66 ---FNIARWTTDLDAALADKNDTMFFDAATTQAR 96 (383)
T ss_dssp ---TTCCCEESCHHHHHHCSSCCEEEECSCSSSS
T ss_pred ---hCCCcccCCHHHHhcCCCCCEEEECCCchHH
Confidence 1111345666 334 358999999997554
No 441
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=94.32 E-value=0.34 Score=51.73 Aligned_cols=161 Identities=15% Similarity=0.121 Sum_probs=98.0
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHH
Q 007805 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (589)
Q Consensus 18 i~l~~p~~--N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (589)
|.=|+|.. -.++++-.+...+.++.+++. .+-.|.|.=. +.|..|.+-++ ....+....++ .++.
T Consensus 342 vian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gAk~l-~a~a 408 (531)
T 3n6r_B 342 VVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDV-PGFLPGTSQEY----------GGVIKHGAKLL-YAYG 408 (531)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CSBCCSHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCC-CCCCCCHHHHH----------hhHHHHHHHHH-HHHH
Confidence 33356653 589999999999999887754 4556666432 23544543221 11223333555 6788
Q ss_pred hCCCcEEEEeCCcccchhhHHhh----hcCEEEEeCCceEeccccccCCCCChhhhhhHhh-hcC---HHHHHHHHHcCC
Q 007805 96 DCKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPR-LVG---LSKAIEMMLLSK 167 (589)
Q Consensus 96 ~~~kp~iaav~G~a~GgG~~lal----a~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~-~~G---~~~a~~l~ltg~ 167 (589)
+...|+|+.|-|.++|||..-.. .+|+++|.++++++ .+++-|....+-+ .+- ....+.--+.-+
T Consensus 409 ~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~-------Vm~pegaa~Il~r~~~~~~~~~~~~~~~y~~~ 481 (531)
T 3n6r_B 409 EATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVA-------VMGAKGATEIIHRGDLGDPEKIAQHTADYEER 481 (531)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHH
T ss_pred hCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEe-------cCCHHHHHHHHhcccccchhHHHHHHHHHHHH
Confidence 99999999999999998874333 38998888777766 4433343333322 111 111111111112
Q ss_pred CCCHHHHHHcCCcceecCchHHHHHHHHHHH
Q 007805 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198 (589)
Q Consensus 168 ~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~ 198 (589)
.-++..|.+.|+||.|++|.+.........+
T Consensus 482 ~~~p~~aa~~~~vD~vIdP~~TR~~l~~~l~ 512 (531)
T 3n6r_B 482 FANPFVASERGFVDEVIQPRSTRKRVARAFA 512 (531)
T ss_dssp HSSSHHHHHHTSSSEECCGGGHHHHHHHHHH
T ss_pred hcCHHHHHhcCccCcccCHHHHHHHHHHHHH
Confidence 2466678899999999999887665444433
No 442
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.30 E-value=0.1 Score=51.53 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (589)
.+|.|||+|-.|+.+|..|+..|. +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 899999876
No 443
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=94.29 E-value=0.062 Score=54.54 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=55.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCC-C-CHHHHHHHhh--cccccCCc
Q 007805 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGK-L-TQDKANNALK--MLKGVLDY 382 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~-~-~~~~~~~~~~--~i~~~~~~ 382 (589)
.||||+|+|.||..++..+.++ +++|+ +.|++++.......+ .|. . ...+....++ .+....+.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~----------~g~~~~~~~~~~~~~~~~~v~v~~~~ 71 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR----------RGIRIYVPQQSIKKFEESGIPVAGTV 71 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH----------TTCCEECCGGGHHHHHTTTCCCCCCH
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHh----------cCcceecCcCHHHHhcccccccccCH
Confidence 4899999999999999998876 45654 667776655442211 110 0 0000111111 12233344
Q ss_pred cC-CCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCC
Q 007805 383 SE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (589)
Q Consensus 383 ~~-~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (589)
+. .+++|+||+|+|..... +.... +++.++.++++++.
T Consensus 72 e~l~~~vDvV~~aTp~~~s~--~~a~~---~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 72 EDLIKTSDIVVDTTPNGVGA--QYKPI---YLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHHHCSEEEECCSTTHHH--HHHHH---HHHTTCEEEECTTS
T ss_pred hHhhcCCCEEEECCCCchhH--HHHHH---HHHcCCeEEEeCCC
Confidence 22 35799999999955432 33232 23345545555543
No 444
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.29 E-value=0.065 Score=54.50 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (589)
++|+|+|+|++|..+|..+...|.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 78999999999999999999999999999999764
No 445
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=94.28 E-value=0.028 Score=55.76 Aligned_cols=91 Identities=19% Similarity=0.008 Sum_probs=57.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCCC
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (589)
.||+|+|+ |.||..++..+.+.|++ .++.+||.+... + ...+....++ +..+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~-------------~------------~~G~~vy~sl~el~~ 61 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGT-------------T------------HLGLPVFNTVREAVA 61 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-------------E------------ETTEEEESSHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccc-------------e------------eCCeeccCCHHHHhh
Confidence 68999998 99999999999888998 556666642100 0 0113344455 3344
Q ss_pred --CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH
Q 007805 387 --DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (589)
Q Consensus 387 --~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~ 429 (589)
++|++|+++|. ..-.+++.+..+. ....++ ..|.+++..
T Consensus 62 ~~~~D~viI~tP~--~~~~~~~~ea~~~-Gi~~iV-i~t~G~~~~ 102 (288)
T 2nu8_A 62 ATGATASVIYVPA--PFCKDSILEAIDA-GIKLII-TITEGIPTL 102 (288)
T ss_dssp HHCCCEEEECCCG--GGHHHHHHHHHHT-TCSEEE-ECCCCCCHH
T ss_pred cCCCCEEEEecCH--HHHHHHHHHHHHC-CCCEEE-EECCCCCHH
Confidence 79999999994 4455666665543 223333 345566654
No 446
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=94.27 E-value=0.13 Score=56.82 Aligned_cols=81 Identities=10% Similarity=0.070 Sum_probs=54.6
Q ss_pred CCCcEEEEeCCcccchhhHHhhhcCEEEEeCCceEeccccccCCCCChhhhhhHhhhcCHHHHHHHHHcCCCC--CHHHH
Q 007805 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--TSEEG 174 (589)
Q Consensus 97 ~~kp~iaav~G~a~GgG~~lala~D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~--~a~~A 174 (589)
...|+|++|.|.|.|||..+...||++|+.+++.+. +. |+... +. .||+.+ +.++.
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~if-------lt-------------GP~vI-k~-~tGeeV~~s~eeL 302 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPII-------LT-------------GAPAI-NK-MLGREVYTSNLQL 302 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEE-------SS-------------CHHHH-HH-HHTSCCCSCTHHH
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEE-------Ee-------------CHHHH-HH-HhCCccccCchhc
Confidence 467999999999999999999999999999886332 21 11111 11 266665 44432
Q ss_pred ------HHcCCcceecCchHHHHHHHHHHHHHHh
Q 007805 175 ------WKLGLIDAVVTSEELLKVSRLWALDIAA 202 (589)
Q Consensus 175 ------~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (589)
...|.+|.++++|+ ++.+.++++.+
T Consensus 303 GGA~vh~~sGvad~va~dd~---eal~~ir~lLs 333 (758)
T 3k8x_A 303 GGTQIMYNNGVSHLTAVDDL---AGVEKIVEWMS 333 (758)
T ss_dssp HSHHHHTTTTSSSEEESSHH---HHHHHHHHHHT
T ss_pred chhhHHHhcCCeeEEecCHH---HHHHHHHHHHh
Confidence 35799999997653 34444555444
No 447
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.24 E-value=0.039 Score=54.75 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.5
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 578999997 9999999999999999999999984
No 448
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.21 E-value=0.021 Score=59.01 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
.||.|||+|.-|..+|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4799999999999999999999999999997643
No 449
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.19 E-value=0.038 Score=55.98 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=33.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 345 (589)
++|.|+|.|..|..++..|.+.|+ |+++|.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 579999999999999999999999 999999999876
No 450
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.16 E-value=0.07 Score=54.45 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=30.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (589)
.+|.|||+|-.|+.+|..|+..|. +++++|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 579999999999999999999998 899999863
No 451
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.13 E-value=0.0098 Score=60.87 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=30.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN 340 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~ 340 (589)
.||.|+|+|.+|.++|..+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 689999999999999999999998 89999998
No 452
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=94.12 E-value=0.042 Score=55.26 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=30.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeE-EEEeCChHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 343 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V-~~~d~~~~~ 343 (589)
|.||||||+ |.||...+..+...+.++ .++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV 40 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 578999999 799999999999888765 578998764
No 453
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.10 E-value=0.085 Score=53.59 Aligned_cols=151 Identities=13% Similarity=0.142 Sum_probs=75.5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhC-CCeEEEEe---CChHHHHHHHHHHHHHHHhhHhcCCCCHHH--HHHHh----hcc
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRGKLTQDK--ANNAL----KML 376 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~-G~~V~~~d---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~----~~i 376 (589)
.+.||+|+|+|.+|.-+.+.+.++ .++|+.+. .+.+.+....+ ..-..|.+.... ....+ ..+
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~-------~ds~hg~~~~~v~~~~~~l~v~g~~i 88 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLK-------YDSVHGNFNGTVEVSGKDLCINGKVV 88 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHH-------CCTTTCSCSSCEEECC-CEEETTEEE
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhc-------ccccCCCCCCcEEEeCCEEEECCeEE
Confidence 356899999999999999998887 57776554 23333322211 001112211000 00000 112
Q ss_pred ccc--CCccCC----CCCCEEEEeccCChHHHHHHHHHHHHhCCCCc--EEEecCCCCCHHHHhcccCCCCcEEEecCCC
Q 007805 377 KGV--LDYSEF----KDVDMVIEAVIESVPLKQKIFSELEKACPPHC--ILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 448 (589)
Q Consensus 377 ~~~--~~~~~~----~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~--ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~ 448 (589)
... .+++.+ .++|+||+|+|-.... +....++..++ +|+|+++.-. .|.-+.| .|
T Consensus 89 ~v~~~~dp~~i~w~~~~vDvV~eatg~~~s~-----e~a~~~l~~GakkvVId~padd~---------~p~~V~G---VN 151 (354)
T 3cps_A 89 KVFQAKDPAEIPWGASGAQIVCESTGVFTTE-----EKASLHLKGGAKKVIISAPPKDN---------VPMYVMG---VN 151 (354)
T ss_dssp EEECCSCGGGCCHHHHTCCEEEECSSSCCSH-----HHHGGGGTTTCSEEEESSCCSSC---------CCBCCTT---TT
T ss_pred EEEecCChHHCCcccCCCCEEEECCCchhhH-----HHHHHHHHcCCcEEEEeCCCCCC---------CCEEEec---cC
Confidence 122 134333 5799999999854432 22345666777 8888876310 0100111 11
Q ss_pred CCCCCCe-eeEecCCCCCHHHHHH-HHHHHHHcCC
Q 007805 449 PAHVMPL-LEIVRTERTSAQVILD-LMTVGKIIKK 481 (589)
Q Consensus 449 p~~~~~l-veiv~~~~t~~e~~~~-~~~l~~~lG~ 481 (589)
+-.+.+. ..++.++.+....+.- +..|.+..|-
T Consensus 152 ~~~~~~~~~~IISNpsCtTn~lap~lkpL~~~~gI 186 (354)
T 3cps_A 152 NTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGI 186 (354)
T ss_dssp GGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHTCE
T ss_pred HHHhCcCCCcEEECCCcHHHHHHHHHHHHHHhCCe
Confidence 1111111 2377777776666544 4445566664
No 454
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=94.07 E-value=0.041 Score=56.25 Aligned_cols=105 Identities=18% Similarity=0.140 Sum_probs=56.1
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhCC-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccccc-CCccC
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSE 384 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~ 384 (589)
+.||+|+| .|.+|..++..|.++. ++|+.+..++....+. +......+. ...+.... ..+... .+.+.
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~---~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~ 78 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKK---YKDACYWFQ-DRDIPENI-----KDMVVIPTDPKH 78 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB---HHHHSCCCC-SSCCCHHH-----HTCBCEESCTTS
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccccc---HHHhccccc-ccccccCc-----eeeEEEeCCHHH
Confidence 36899999 7999999999988764 5777664332211110 000000000 00000000 112221 23433
Q ss_pred C-C-CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC
Q 007805 385 F-K-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (589)
Q Consensus 385 ~-~-~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~ 426 (589)
+ + ++|+||+|+| .....++...+. ..++.|+++++..
T Consensus 79 ~~~~~~DvV~~atp--~~~~~~~a~~~~---~aG~~VId~s~~~ 117 (354)
T 1ys4_A 79 EEFEDVDIVFSALP--SDLAKKFEPEFA---KEGKLIFSNASAY 117 (354)
T ss_dssp GGGTTCCEEEECCC--HHHHHHHHHHHH---HTTCEEEECCSTT
T ss_pred HhcCCCCEEEECCC--chHHHHHHHHHH---HCCCEEEECCchh
Confidence 4 6 8999999998 333444444433 4567788887754
No 455
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.03 E-value=0.067 Score=57.65 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=32.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (589)
+++|.|.|+ |.+|+.++..|++.|++|++.++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 468999995 999999999999999999999998654
No 456
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.99 E-value=0.055 Score=55.10 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=55.1
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
+.||+|+| .|.+|..+...|.++.. +++.+....+.-.+ +. .. .+.+. . ...+... +.+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~----~~----~~--~~~~~-----g-~~~~~~~-~~~~~ 66 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEP----VH----FV--HPNLR-----G-RTNLKFV-PPEKL 66 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSB----GG----GT--CGGGT-----T-TCCCBCB-CGGGC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCch----hH----Hh--Cchhc-----C-ccccccc-chhHh
Confidence 46899999 69999999999987754 76665433221100 00 00 00000 0 0011111 12235
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (589)
.++|+||+|+|.... .++... ++..++.++++++...
T Consensus 67 ~~vDvV~~a~g~~~s--~~~a~~---~~~aG~~VId~Sa~~r 103 (345)
T 2ozp_A 67 EPADILVLALPHGVF--AREFDR---YSALAPVLVDLSADFR 103 (345)
T ss_dssp CCCSEEEECCCTTHH--HHTHHH---HHTTCSEEEECSSTTS
T ss_pred cCCCEEEEcCCcHHH--HHHHHH---HHHCCCEEEEcCcccc
Confidence 789999999996543 333333 3456777888887554
No 457
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.99 E-value=0.13 Score=49.58 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=26.2
Q ss_pred eEEEEcC-CCCcHHHHHHHHhC-CCeEE-EEeCC
Q 007805 310 KVAVIGG-GLMGSGIATAHILN-NIYVV-LKEVN 340 (589)
Q Consensus 310 kI~IIG~-G~mG~~iA~~l~~~-G~~V~-~~d~~ 340 (589)
||+|+|+ |.||..++..+... |++|+ ++|++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 7999997 99999999998866 89877 56654
No 458
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=93.99 E-value=0.39 Score=46.94 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=34.9
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 66 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVD 66 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 46777786 789999999999999999999999988776543
No 459
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.93 E-value=0.052 Score=54.94 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
.++|.|.|+ |.+|+.++..|++.|++|++.++++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 478999996 99999999999999999999999654
No 460
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=93.85 E-value=0.034 Score=56.23 Aligned_cols=63 Identities=13% Similarity=0.091 Sum_probs=44.3
Q ss_pred CCccceEEEEcCCCCcH-HHHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCC
Q 007805 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (589)
Q Consensus 305 ~~~~~kI~IIG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (589)
+|...||+|||+|.||. ..+..+... +++|+ ++|+++++ ..+...++
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------------------------------~g~~~~~~ 71 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------------------------------EGVNSYTT 71 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------------------------------TTSEEESS
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------------------------------cCCCccCC
Confidence 44556899999999998 688888775 67754 78888542 01334555
Q ss_pred c-cCC---CCCCEEEEeccC
Q 007805 382 Y-SEF---KDVDMVIEAVIE 397 (589)
Q Consensus 382 ~-~~~---~~aDlVIeavpe 397 (589)
+ +.+ .+.|+|++|+|.
T Consensus 72 ~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 72 IEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp HHHHHHHCTTCCEEEECSCH
T ss_pred HHHHHhCCCCCCEEEEeCCc
Confidence 5 333 468999999993
No 461
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.83 E-value=0.25 Score=50.05 Aligned_cols=40 Identities=18% Similarity=0.178 Sum_probs=35.4
Q ss_pred ceEEEE-cCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHH
Q 007805 309 RKVAVI-GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (589)
Q Consensus 309 ~kI~II-G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (589)
++|.|+ |+|.+|...++.+...|.+|++.++++++++.+.
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 192 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK 192 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 579999 6899999999998889999999999999877753
No 462
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.82 E-value=0.22 Score=49.36 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=31.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (589)
+++|.|.|+ |.+|+.++..|++.|++|++.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN 38 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence 368999995 999999999999999999999998543
No 463
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.81 E-value=0.061 Score=53.42 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999996 9999999999999999999999983
No 464
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=93.79 E-value=0.087 Score=50.78 Aligned_cols=78 Identities=15% Similarity=0.016 Sum_probs=51.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
-++|+++|+|.||..++.. . ++++ .+|+ ++ + +.+ .+..++|+ +.+
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k---~--------------gel----------gv~a~~d~d~ll 58 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RI---S--------------KDI----------PGVVRLDEFQVP 58 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SS---C--------------CCC----------SSSEECSSCCCC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cc---c--------------ccc----------CceeeCCHHHHh
Confidence 4689999999999999998 4 8876 4666 21 1 101 23456667 445
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (589)
+++|+|+||.+ .+ .+-+.+.+.+..+.=+++.+
T Consensus 59 a~pD~VVe~A~--~~---av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 59 SDVSTVVECAS--PE---AVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp TTCCEEEECSC--HH---HHHHHHHHHTTSSSEEEECC
T ss_pred hCCCEEEECCC--HH---HHHHHHHHHHHCCCCEEEcC
Confidence 79999999985 33 22233666777765444433
No 465
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.74 E-value=0.33 Score=46.94 Aligned_cols=42 Identities=29% Similarity=0.404 Sum_probs=34.4
Q ss_pred eEEEE-cC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHH
Q 007805 310 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (589)
Q Consensus 310 kI~II-G~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 351 (589)
|+++| |+ +-||.++|..|++.|..|+++|++++.+++..+++
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 55555 65 67899999999999999999999999888765543
No 466
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.70 E-value=0.033 Score=54.77 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=33.7
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHH
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 343 (589)
.+++|.|.|+|.+|+.++..|++.|++|++.+++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3578999999999999999999999999999998654
No 467
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=93.63 E-value=0.091 Score=53.74 Aligned_cols=99 Identities=17% Similarity=0.230 Sum_probs=56.3
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhCC-CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCC
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (589)
..||+|+| .|.+|..+...|.++. ++++.+....+.-.+ +......+ .+.+. ..+.... .+..
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~----~~~~~~~~--~~~v~--------~dl~~~~-~~~~ 80 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQS----MESVFPHL--RAQKL--------PTLVSVK-DADF 80 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSC----HHHHCGGG--TTSCC--------CCCBCGG-GCCG
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCC----HHHhCchh--cCccc--------ccceecc-hhHh
Confidence 35899999 7999999999999875 377766433221101 11000000 01000 0111111 2334
Q ss_pred CCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCC
Q 007805 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (589)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (589)
+++|+||+|+|..... +. ...+ ..++.++++++...
T Consensus 81 ~~vDvVf~atp~~~s~--~~---a~~~-~aG~~VId~sa~~R 116 (359)
T 1xyg_A 81 STVDAVFCCLPHGTTQ--EI---IKEL-PTALKIVDLSADFR 116 (359)
T ss_dssp GGCSEEEECCCTTTHH--HH---HHTS-CTTCEEEECSSTTT
T ss_pred cCCCEEEEcCCchhHH--HH---HHHH-hCCCEEEECCcccc
Confidence 6899999999865542 22 2334 66788889888654
No 468
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.59 E-value=0.54 Score=45.38 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=36.2
Q ss_pred cceEEEEcC-C-CCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 308 VRKVAVIGG-G-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 308 ~~kI~IIG~-G-~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
-++|.|.|+ | -+|.++|..|++.|++|++.+++++.++...+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 65 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD 65 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH
Confidence 357889998 8 49999999999999999999999988776543
No 469
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=93.59 E-value=0.11 Score=53.00 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=43.4
Q ss_pred ceEEEEcCCCCcHH-HHHHHHhC-CCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 309 RKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 309 ~kI~IIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
.||+|||+|.||.. .+..+... +++|+ ++|++ ..+...+. .. ...+...+++ +.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~--------~~------------~~~~~~~~~~~~l 60 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAP--------FK------------EKGVNFTADLNEL 60 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHH--------HH------------TTTCEEESCTHHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHh--------hC------------CCCCeEECCHHHH
Confidence 58999999999984 55555554 67765 78887 21111110 00 0123455666 44
Q ss_pred CC--CCCEEEEeccCChH
Q 007805 385 FK--DVDMVIEAVIESVP 400 (589)
Q Consensus 385 ~~--~aDlVIeavpe~~~ 400 (589)
++ +.|+|++|+|....
T Consensus 61 l~~~~~D~V~i~tp~~~h 78 (349)
T 3i23_A 61 LTDPEIELITICTPAHTH 78 (349)
T ss_dssp HSCTTCCEEEECSCGGGH
T ss_pred hcCCCCCEEEEeCCcHHH
Confidence 44 48999999996554
No 470
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.53 E-value=0.1 Score=54.73 Aligned_cols=64 Identities=20% Similarity=0.141 Sum_probs=43.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHh----------CCCeE-EEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhccc
Q 007805 309 RKVAVIGGGLMGSGIATAHIL----------NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 377 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~----------~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 377 (589)
-+|+|||+|.||+.++..+.+ .+++| .++|+++++.+.. . ....
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-----------~--------------~~~~ 65 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-----------A--------------GGLP 65 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-----------H--------------TTCC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-----------c--------------ccCc
Confidence 479999999999999987764 24444 4778888764331 0 1123
Q ss_pred ccCCc-cCC--CCCCEEEEeccC
Q 007805 378 GVLDY-SEF--KDVDMVIEAVIE 397 (589)
Q Consensus 378 ~~~~~-~~~--~~aDlVIeavpe 397 (589)
+++|+ +.+ .+.|+|++|+|.
T Consensus 66 ~~~d~~ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 66 LTTNPFDVVDDPEIDIVVELIGG 88 (444)
T ss_dssp EESCTHHHHTCTTCCEEEECCCS
T ss_pred ccCCHHHHhcCCCCCEEEEcCCC
Confidence 45666 334 368999999985
No 471
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=93.51 E-value=0.022 Score=53.68 Aligned_cols=78 Identities=18% Similarity=0.200 Sum_probs=48.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHh-CCCeEE-EEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 309 RKVAVIGGGLMGSGIATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
.+|+|||+|.+|..++..+.. .|++++ ++|.++++.... ..| . .+...+++ +.+
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~------------i~g----------v-~V~~~~dl~ell 137 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRP------------VRG----------G-VIEHVDLLPQRV 137 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE------------ETT----------E-EEEEGGGHHHHS
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhh------------hcC----------C-eeecHHhHHHHH
Confidence 689999999999999985222 277654 779998754321 001 0 11123444 333
Q ss_pred C-CCCEEEEeccCChHHHHHHHHHHHH
Q 007805 386 K-DVDMVIEAVIESVPLKQKIFSELEK 411 (589)
Q Consensus 386 ~-~aDlVIeavpe~~~~k~~v~~~l~~ 411 (589)
+ +.|.|++|+| ....+++...+.+
T Consensus 138 ~~~ID~ViIA~P--s~~~~ei~~~l~~ 162 (211)
T 2dt5_A 138 PGRIEIALLTVP--REAAQKAADLLVA 162 (211)
T ss_dssp TTTCCEEEECSC--HHHHHHHHHHHHH
T ss_pred HcCCCEEEEeCC--chhHHHHHHHHHH
Confidence 3 6899999999 3334466555544
No 472
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.46 E-value=0.28 Score=47.50 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=34.9
Q ss_pred ceEEEE-c-CCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHH
Q 007805 309 RKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (589)
Q Consensus 309 ~kI~II-G-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (589)
.|+++| | ++-+|.++|..|++.|.+|++.|++++.+++..+.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~ 52 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDT 52 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 356666 5 47789999999999999999999999988776543
No 473
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=93.40 E-value=0.031 Score=55.40 Aligned_cols=92 Identities=17% Similarity=-0.002 Sum_probs=59.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cCC
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (589)
..||+|+|+ |.||..++..+.+.|++ .++.+||..... + ...+....++ +..
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g~-------------~------------i~G~~vy~sl~el~ 60 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGGM-------------E------------VLGVPVYDTVKEAV 60 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-------------E------------ETTEEEESSHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCCc-------------e------------ECCEEeeCCHHHHh
Confidence 368999998 99999999999988998 556666642100 0 0123344444 333
Q ss_pred C--CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCCCHH
Q 007805 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (589)
Q Consensus 386 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~ 429 (589)
+ ++|++|+++| ++...+++.+..+. .-..++ ..|++++..
T Consensus 61 ~~~~~Dv~Ii~vp--~~~~~~~~~ea~~~-Gi~~vV-i~t~G~~~~ 102 (288)
T 1oi7_A 61 AHHEVDASIIFVP--APAAADAALEAAHA-GIPLIV-LITEGIPTL 102 (288)
T ss_dssp HHSCCSEEEECCC--HHHHHHHHHHHHHT-TCSEEE-ECCSCCCHH
T ss_pred hcCCCCEEEEecC--HHHHHHHHHHHHHC-CCCEEE-EECCCCCHH
Confidence 4 7999999998 66666777776553 223333 345566654
No 474
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=93.40 E-value=0.53 Score=50.85 Aligned_cols=155 Identities=14% Similarity=0.107 Sum_probs=99.9
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHHhCCCcEEEEe
Q 007805 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (589)
Q Consensus 26 N~l~~~~~~~l~~~l~~~~~~~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~iaav 105 (589)
-.++++-.+.-.+.++.+++. ++-+|.|.=. +.|..|.+-++ ....+....++ .++.+...|+|+.|
T Consensus 387 G~l~~~~a~Kaarfi~lcd~f-~iPlv~lvDt-pGf~~G~~aE~----------~Gi~~~gAk~l-~a~a~a~VP~itvI 453 (588)
T 3gf3_A 387 GKLYRQGLIKMNEFVTLCARD-RIPLIWLQDT-TGIDVGDEAEK----------AELLGLGQSLI-YSIENSKLPSLEIT 453 (588)
T ss_dssp TEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHHH----------TTHHHHHHHHH-HHHHHHCSCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhhc-CCCeEEEecC-CCCCCCHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 368999999999999988764 4666666433 34666654321 11233344555 67899999999999
Q ss_pred CCcccchhhHHhhhc-------CEEEEeCCceEeccccccCCCCChhhhhhHh-hhc------CH----------HHHHH
Q 007805 106 EGLALGGGLELAMGC-------HARIAAPKTQLGLPELTLGVIPGFGGTQRLP-RLV------GL----------SKAIE 161 (589)
Q Consensus 106 ~G~a~GgG~~lala~-------D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~-~~~------G~----------~~a~~ 161 (589)
-|.+.|||. +++++ |+++|.++|+++ .+++-|....+- +.+ |. ....+
T Consensus 454 ~g~~~Ggg~-~am~~~~~~~~~~~~~awp~A~~s-------Vm~pEgaa~Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (588)
T 3gf3_A 454 IRKASAAAH-YVLGGPQGNNTNVFSIGTGACEYY-------VMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMIQM 525 (588)
T ss_dssp SSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHH
T ss_pred cCCccHHHH-HHhcccccCCccceEEECCCceEE-------eCCHHHHHHHHhhhHHhhhhccccccchHHHHHHHHHHH
Confidence 999988775 44443 377777766665 444444433332 221 10 01111
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCchHHHHHHHHHHHHHHhcC
Q 007805 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (589)
Q Consensus 162 l~ltg~~~~a~~A~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (589)
+- +..++..|-+.|+||.|+++.+.......+.....+.|
T Consensus 526 y~---~~~~p~~aA~r~~vD~VIdP~~TR~~l~~~~~~~~~~p 565 (588)
T 3gf3_A 526 YT---DKSRPKYCTEKGMVDEIVDMTEVRPYIQAFTEAAYQNP 565 (588)
T ss_dssp HH---HTTSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSC
T ss_pred HH---HhCCHHHHHhcCCCCeeeCHHHHHHHHHHHHHHHHcCC
Confidence 11 13588899999999999999998887777776655554
No 475
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=93.37 E-value=0.068 Score=53.82 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=26.5
Q ss_pred HcCCCHHHHHHHHHhcCCCCcHHHHHHHhchHHHHHHH
Q 007805 510 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 547 (589)
Q Consensus 510 ~~Gv~~~~iD~~~~~~g~p~Gpf~~~D~~Gld~~~~~~ 547 (589)
++|.+.+++=+-.+..||.- |=-..|.-|+|...++.
T Consensus 183 ~~g~~f~~~l~~Aq~~GyaE-~DP~~Dv~G~D~a~Kl~ 219 (325)
T 3ing_A 183 ANGRSLRDVVDDAIKKGIAE-SNPQDDLNGLDAARKSV 219 (325)
T ss_dssp HTTCCHHHHHHHHHHHTCSC-SSTHHHHTTHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCCC-CCcccccCChhHHHHHH
Confidence 78999888766666666631 22268999999988754
No 476
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.29 E-value=0.055 Score=55.12 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=30.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCC
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 340 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~ 340 (589)
..|.|||+|.+|.++|..|+++|++|+++|..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 47999999999999999999999999999974
No 477
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=93.28 E-value=0.52 Score=45.04 Aligned_cols=42 Identities=26% Similarity=0.231 Sum_probs=36.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
-++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAK 51 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 357788886 889999999999999999999999988776544
No 478
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=93.22 E-value=0.48 Score=45.11 Aligned_cols=41 Identities=24% Similarity=0.186 Sum_probs=35.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 56 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSD 56 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHH
Confidence 56778886 889999999999999999999999988776544
No 479
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.10 E-value=0.72 Score=44.53 Aligned_cols=41 Identities=22% Similarity=0.181 Sum_probs=35.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
+++.|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAK 53 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH
Confidence 56778886 789999999999999999999999988776544
No 480
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.09 E-value=0.05 Score=59.57 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=30.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (589)
.+|.|||+|-+|+.++..|+..|+ +++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 589999999999999999999998 899999764
No 481
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=93.08 E-value=0.16 Score=51.67 Aligned_cols=104 Identities=25% Similarity=0.325 Sum_probs=55.2
Q ss_pred cceEEEEc-CCCCcHHHHHHHHhCC-CeEEEEe-CChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccC-Ccc
Q 007805 308 VRKVAVIG-GGLMGSGIATAHILNN-IYVVLKE-VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-DYS 383 (589)
Q Consensus 308 ~~kI~IIG-~G~mG~~iA~~l~~~G-~~V~~~d-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~ 383 (589)
+.||+|+| .|.+|..+...|..+. ++|+.+. .+.+.-+. +...+.. ...+.+.... ..+.+.+ +.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~----~~~~~~~-~~~~~~~~~~-----~~~~~~~~d~~ 73 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKK----YKDAVKW-IEQGDIPEEV-----QDLPIVSTNYE 73 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSB----HHHHCCC-CSSSSCCHHH-----HTCBEECSSGG
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCC----HHHhcCc-ccccccccCC-----ceeEEeeCCHH
Confidence 46899999 7999999999888764 4776663 22111110 0000000 0000011000 1122211 334
Q ss_pred CCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEecCCCC
Q 007805 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (589)
Q Consensus 384 ~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~ 426 (589)
.++++|+||+|+| .....++...+ +..++.++++++..
T Consensus 74 ~~~~vDvVf~atp--~~~s~~~a~~~---~~aG~~VId~s~~~ 111 (350)
T 2ep5_A 74 DHKDVDVVLSALP--NELAESIELEL---VKNGKIVVSNASPF 111 (350)
T ss_dssp GGTTCSEEEECCC--HHHHHHHHHHH---HHTTCEEEECSSTT
T ss_pred HhcCCCEEEECCC--hHHHHHHHHHH---HHCCCEEEECCccc
Confidence 4578999999998 33334444443 34566678888754
No 482
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=93.05 E-value=0.05 Score=55.11 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=46.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEE-EEeCCh-HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCc-cC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVV-LKEVNS-EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~-~~d~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (589)
+.||+|||+|.+|...+..+ ..+++|+ ++|+++ ++.+++.+. .++-.+ .....+|+ +.
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~--------~~~~~~----------~~~~~~~~~~l 62 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKA--------ISEMNI----------KPKKYNNWWEM 62 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHH--------HHTTTC----------CCEECSSHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHH--------HHHcCC----------CCcccCCHHHH
Confidence 35899999999998777776 5677766 789987 344443221 111000 02345666 33
Q ss_pred C--CCCCEEEEeccCCh
Q 007805 385 F--KDVDMVIEAVIESV 399 (589)
Q Consensus 385 ~--~~aDlVIeavpe~~ 399 (589)
+ .+.|+|++|+|...
T Consensus 63 l~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 63 LEKEKPDILVINTVFSL 79 (337)
T ss_dssp HHHHCCSEEEECSSHHH
T ss_pred hcCCCCCEEEEeCCcch
Confidence 4 35899999998443
No 483
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=92.98 E-value=0.041 Score=55.62 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHh---CCCeEEEEeCCh
Q 007805 308 VRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNS 341 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~---~G~~V~~~d~~~ 341 (589)
|.+|.|||+|..|.+.|..|++ .|++|+++|.++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 4689999999999999999999 999999999763
No 484
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.98 E-value=0.16 Score=51.82 Aligned_cols=33 Identities=36% Similarity=0.516 Sum_probs=25.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCC----CeEE-EEeCC
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNN----IYVV-LKEVN 340 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G----~~V~-~~d~~ 340 (589)
+-||+|||+|.||+.++..+.+.. ++|+ ++|.+
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~ 41 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAE 41 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECC
Confidence 358999999999999999998863 4543 45643
No 485
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.93 E-value=0.046 Score=55.93 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=30.5
Q ss_pred eEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 310 kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
-|.|||+|.-|.+.|..|+++|++|+++|+.++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 399999999999999999999999999998653
No 486
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.81 E-value=0.043 Score=58.67 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
|++|.|||+|.-|.+-|..|+++|++|++++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 68999999999999999999999999999998753
No 487
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.80 E-value=0.35 Score=51.18 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=60.5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccccCCccCCC
Q 007805 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (589)
Q Consensus 307 ~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (589)
.+++|.|+|+|.+|..+|..|- .+++|.+++.|+++++...+.+.+ ..+=.|..+..+. -..+-+.
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~---~~Vi~GD~td~~~----------L~ee~i~ 299 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELEN---TIVFCGDAADQEL----------LTEENID 299 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTT---SEEEESCTTCHHH----------HHHTTGG
T ss_pred cccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCC---ceEEeccccchhh----------HhhcCch
Confidence 4588999999999999999874 569999999999998876442211 0011111110000 0004578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEE
Q 007805 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (589)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (589)
++|++|-++..|- ..-+...+++.+....+++
T Consensus 300 ~~D~~ia~T~~De--~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 300 QVDVFIALTNEDE--TNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp GCSEEEECCSCHH--HHHHHHHHHHHTTCSEEEE
T ss_pred hhcEEEEcccCcH--HHHHHHHHHHHcCCccccc
Confidence 9999998876433 2223334555566555655
No 488
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=92.73 E-value=0.067 Score=48.47 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=31.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
.+|.|||+|..|..+|..|++.|.+|+++++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 579999999999999999999999999999875
No 489
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.72 E-value=0.73 Score=44.38 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=32.9
Q ss_pred ceEEEEcCC---CCcHHHHHHHHhCCCeEEEEeCChHHHHHHH
Q 007805 309 RKVAVIGGG---LMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (589)
Q Consensus 309 ~kI~IIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 348 (589)
|.+-|-|++ -+|.++|..|++.|.+|++.+++++.++...
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~ 49 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE 49 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 445566863 4899999999999999999999988776653
No 490
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=92.72 E-value=0.66 Score=44.97 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=35.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (589)
++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 47 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATE 47 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 45777786 7899999999999999999999999887775443
No 491
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.71 E-value=0.65 Score=44.91 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=35.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 350 (589)
+++.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESA 51 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 56778885 7899999999999999999999999887775443
No 492
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=92.70 E-value=0.08 Score=51.82 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=32.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhC--CCeEEEEeCChHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILN--NIYVVLKEVNSEYLL 345 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~ 345 (589)
++|.|.|+ |.+|+.++..|++. |++|++.+++++..+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 40 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS 40 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh
Confidence 46899997 99999999999998 999999999876543
No 493
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.67 E-value=0.18 Score=54.96 Aligned_cols=82 Identities=16% Similarity=0.157 Sum_probs=0.0
Q ss_pred CCCCCCccceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChHH-----------------HHHHHHHHHHHHHhhHhcCC
Q 007805 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-----------------LLKGIKTIEANVRGLVTRGK 363 (589)
Q Consensus 301 ~~~~~~~~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-----------------~~~~~~~~~~~~~~~~~~g~ 363 (589)
.+..... ++|.|+|.|.+|..+|..|.+.|++|+++|.|++. +++
T Consensus 342 ~~~~~~~-~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~----------------- 403 (565)
T 4gx0_A 342 IGEAPED-ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQ----------------- 403 (565)
T ss_dssp -----CC-CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHH-----------------
T ss_pred hcCCCCC-CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHh-----------------
Q ss_pred CCHHHHHHHhhcccccCCccCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEE
Q 007805 364 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (589)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (589)
..+++||.+|.++++| +....+.....+.-++-.||+
T Consensus 404 -------------------agi~~ad~vi~~~~~d-~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 404 -------------------AGIDRASGIIVTTNDD-STNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp -------------------HTTTSCSEEEECCSCH-HHHHHHHHHHHHHCSSSEEEE
T ss_pred -------------------cCccccCEEEEECCCc-hHHHHHHHHHHHHCCCCEEEE
No 494
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=92.64 E-value=0.38 Score=44.31 Aligned_cols=93 Identities=13% Similarity=0.057 Sum_probs=61.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCC--CeEEEEeCChHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHHhhcccc-cCC----
Q 007805 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLD---- 381 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~---- 381 (589)
.+|.-||+|. | .++..+++.+ .+|+.+|++++.++.+.+.+... |. .++.. ..|
T Consensus 42 ~~vLDiG~G~-G-~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~----------~~v~~~~~d~~~~ 102 (204)
T 3e05_A 42 LVMWDIGAGS-A-SVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF-------VA----------RNVTLVEAFAPEG 102 (204)
T ss_dssp CEEEEETCTT-C-HHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH-------TC----------TTEEEEECCTTTT
T ss_pred CEEEEECCCC-C-HHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh-------CC----------CcEEEEeCChhhh
Confidence 5799999997 4 4566666665 79999999999999886654321 10 11111 111
Q ss_pred ccCCCCCCEEEEeccCChHHHHHHHHHHHHhCCCCcEEEec
Q 007805 382 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (589)
Q Consensus 382 ~~~~~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (589)
+......|+|+...+.. ....+++++...++++..++..
T Consensus 103 ~~~~~~~D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CTTSCCCSEEEESCCTT--CHHHHHHHHHHHCCTTCEEEEE
T ss_pred hhcCCCCCEEEECCCCc--CHHHHHHHHHHhcCCCeEEEEE
Confidence 12335689999876422 3557888999999988766543
No 495
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=92.60 E-value=0.057 Score=54.14 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=30.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCCh
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (589)
.+|.|||+|..|.+.|..|++.|++|+++|+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999999999999999999999999874
No 496
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=92.59 E-value=0.66 Score=44.81 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=34.9
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 349 (589)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA 55 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56778885 889999999999999999999999887766433
No 497
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.56 E-value=0.066 Score=55.52 Aligned_cols=35 Identities=31% Similarity=0.259 Sum_probs=32.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHhCCCeEEEEeCChH
Q 007805 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (589)
Q Consensus 308 ~~kI~IIG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 342 (589)
-.+|.|||+|..|.+.|..|+++|++|+++|+++.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 35799999999999999999999999999998764
No 498
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.54 E-value=0.55 Score=48.66 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=35.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHhCCC-eEEEEeCChHHHHHH
Q 007805 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (589)
Q Consensus 309 ~kI~IIG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 347 (589)
.+|.|+|+|.+|...++.+...|. +|++.|.++++++.+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~ 254 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA 254 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 579999999999998888888899 899999999988775
No 499
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.51 E-value=0.17 Score=49.91 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=33.1
Q ss_pred cceEEEEcC-CCCcHHHHHHHHhCC-CeEEEEeCChHHH
Q 007805 308 VRKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYL 344 (589)
Q Consensus 308 ~~kI~IIG~-G~mG~~iA~~l~~~G-~~V~~~d~~~~~~ 344 (589)
.++|.|.|+ |.+|+.++..|++.| ++|++.+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~ 43 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 43 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH
Confidence 368999998 999999999999988 9999999997654
No 500
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.50 E-value=0.76 Score=45.87 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=37.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHhCCCeEEEEeCChHHHHHHHHHH
Q 007805 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (589)
Q Consensus 309 ~kI~IIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 351 (589)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l 52 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57888886 88999999999999999999999999887765433
Done!