BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007808
(589 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/536 (71%), Positives = 456/536 (85%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ +T+K +HQIQ Q++ +G + ++YITP+++T CA LK+MTYAR++FD+I D N+ WN
Sbjct: 46 QSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWN 105
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+MF GYAQ+E +R VV LF QMK +D PNCFTFP+VLKSC KINAL EGE++HC ++K
Sbjct: 106 SMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKC 165
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GFR N FVGT LI++YS G + AYK+F EM ERNVV WTSMINGYI D+VSAR LF
Sbjct: 166 GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF 225
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+LAPERDV+LWN +VSGYI+ +M+EARKLF +MP +DV+ WNT+L GYA NG+VE +
Sbjct: 226 DLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEG 285
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LFEEMPERN+FSWN LIGGYA+NGLFFEVL +FKRML+E V PNDAT+VTVLSACARLG
Sbjct: 286 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 345
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
ALD KWVHVYAE +G +GNV VGNAL+DMYAKCGIIENA+ VF MDTKDLI+WNT+I
Sbjct: 346 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 405
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLAMH RGA AL+LF +MKNAG+ PDGITFIGILCACTHMGLVE+G +YFQSMA DY I+
Sbjct: 406 GLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIM 465
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
PQIEHYGCMVD+LARAGRL +A+ FV++MP+EAD VIWA LLG+CR+YKNVELAELAL+R
Sbjct: 466 PQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQR 525
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM 545
L ELEPKNPAN+VMLSNIYGD GRW+DVAR+KVAMRDTGFKKLPGCS IEVN+ V+
Sbjct: 526 LIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVV 581
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/533 (71%), Positives = 454/533 (85%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T+K +HQIQ Q++ +G + ++YITP+++T CA LK+MTYAR++FD+I D N+ WN+MF
Sbjct: 112 KTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMF 171
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GYAQ+E +R VV LF QMK +D PNCFTFP+VLKSC KINAL EGE++HC ++K GFR
Sbjct: 172 RGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFR 231
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N FVGT LI++YS G + AYK+F EM ERNVV WTSMINGYI D+VSAR LF+LA
Sbjct: 232 GNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLA 291
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
PERDV+LWN +VSGYI+ +M+EARKLF +MP +DV+ WNT+L GYA NG+VE + LFE
Sbjct: 292 PERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFE 351
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPERN+FSWN LIGGYA+NGLFFEVL +FKRML+E V PNDAT+VTVLSACARLGALD
Sbjct: 352 EMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALD 411
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
KWVHVYAE +G +GNV VGNAL+DMYAKCGIIENA+ VF MDTKDLI+WNT+I GLA
Sbjct: 412 LGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLA 471
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
MH RGA AL+LF +MKNAG+ PDGITFIGILCACTHMGLVE+G +YFQSMA DY I+PQI
Sbjct: 472 MHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQI 531
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCMVD+LARAGRL +A FV++MP+EAD VIWA LLG+CR+YKNVELAELAL+RL E
Sbjct: 532 EHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIE 591
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM 545
LEPKNPAN+VMLSNIYGD GRW+DVAR+KVAMRDTGFKKLPGCS IEVN+ V+
Sbjct: 592 LEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVV 644
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/527 (70%), Positives = 440/527 (83%), Gaps = 2/527 (0%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
M A K+FD+I + N WNAMF GY+QNE H+ V+VLF QMK LD MPNCFTFP++LKS
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
CVKINAL+EGEE+HC V+K+GFRAN FV T LI++Y++G AI AAY+VFGEM ERNV+ W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
T+MINGYI+C D+V+AR LF+LAPERD++LWNT++SGYI+ +++I AR+LFD+MP KDV+
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
SWNT+L+GYA+NGDV C+RLFEEMPERNVFSWN LIGGY NG F EVL AFKRML +G
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDG 240
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
V PNDAT+V VLSACARLGALD KWVHVYAE +GY+GNV V NAL+DMYAKCG++E A
Sbjct: 241 TVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETA 300
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+DVF SMD KDLI+WNTII GLA+HG GA AL+LF MK AGE PDGITFIGILCACTHM
Sbjct: 301 LDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHM 360
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
GLVE+G SYF+SM DYSIVP+IEHYGC+VDLL RAG LA AVDF+++MPIEADAVIWA
Sbjct: 361 GLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAA 420
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LLG+CRVYKNVELAELALE+L E EPKNPAN+VMLSNIYGD GRWKDVAR+KVAMRDTGF
Sbjct: 421 LLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGF 480
Query: 530 KKLPGCSSIEVNE--VVMLGCLSRELDRKSIVRAEANMIKLLPQNNH 574
KKLPGCS IEVN+ V R +++ I + KLL + +
Sbjct: 481 KKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGY 527
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 163/403 (40%), Gaps = 84/403 (20%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
++ K ++ V+ SG + ++ +I A + A ++F ++ ++NV++W A
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M NGY T L T + D P
Sbjct: 123 MINGYI------TCCDLVTARRLFDLAP-------------------------------- 144
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+I + +I Y K + A ++F +M ++V+ W +++NGY S GD+++ LFE
Sbjct: 145 -ERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFE 203
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-------P------------------- 224
PER+V WN ++ GY E F +M P
Sbjct: 204 EMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALD 263
Query: 225 --------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
K +V N ++ YA G VE +F+ M +++ SWN +IGG A
Sbjct: 264 LGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLA 323
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQG 328
+G + L+ F M G P+ T + +L AC +G ++ FS + + +Y+
Sbjct: 324 VHGHGADALNLFSHMKIAGEN-PDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPR 382
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISG 370
G ++D+ + G++ +AVD M + D + W ++
Sbjct: 383 IEHYG-CIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGA 424
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/561 (62%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ LHQIQ Q+VT GLE +D++ P IT C++ K++ +ARK+FDKI N +WNAMF GY
Sbjct: 26 ERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGY 85
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
QN HR VVLF ++ ++ MPNCFTFP+++KSC K+ +REGEE+HC K+GF++N
Sbjct: 86 LQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNS 145
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV T+LI++YS +E AYKVFGEM ERNVVVWT++INGYI CGD+VS R LF+LAPER
Sbjct: 146 FVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPER 205
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
DV++W+ ++SGYI+ +NM AR+LFD+MP +D +SWN ML+GYA NG+VE +++F+EMP
Sbjct: 206 DVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMP 265
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERNVFSWNGLIGGY NGLF E L++FKRML EG V PND T+V VLSAC+RLGALD K
Sbjct: 266 ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGK 325
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
WVHVYAE GY+GN+ VGN LIDMYAKCG+IENAV VFN +D KD+I+WNTII+GLA+HG
Sbjct: 326 WVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHG 385
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
AL +F MK+ GE PDG+TF+GIL ACTHMGLV++G YF+SM YSIVPQIEHY
Sbjct: 386 HAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY 445
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GCMVDLL RAG L +A++F+++MPIE DAVIWA LLG+CR+YKNVE+AELAL+RL ELEP
Sbjct: 446 GCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEP 505
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM--LGCLSREL 553
NPANFVM+SNIY DLGR +DVAR+K+AMRDTGF+KLPGCS IE N+ V+ R
Sbjct: 506 NNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHS 565
Query: 554 DRKSIVRAEANMIKLLPQNNH 574
+ +SI R + LL + +
Sbjct: 566 ETESIYRVLKGLTMLLRSHGY 586
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/559 (64%), Positives = 437/559 (78%), Gaps = 2/559 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T L ++Q Q++T G + + Y+ P ++T+ LKQM +AR +FD D V WNA+
Sbjct: 36 KTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAIS 95
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY N F+R VV LF +MK +D PNCFTFP+VLKSC KI A EGEE+HC V+K G
Sbjct: 96 RGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLE 155
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N FV T LI++YS G+AI +AYK+F M ERN+V WTSMI+GYI C + AR LF+LA
Sbjct: 156 GNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLA 215
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
PERDV+LWN +VSGYI++ +M ARKLFD MP +D +SWNTML+GYANNGDVE C++LFE
Sbjct: 216 PERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFE 275
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPERNVFSWNGLIGGYA+NG FFEVL FKRML +G V PNDAT+VTVLSACARLGALD
Sbjct: 276 EMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALD 335
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
KWVHVYA G++G++ VGNALIDMY+KCG+IENA++VF SMD KDLITWN++I GLA
Sbjct: 336 LGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLA 395
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG GA AL+LFH+MK GE PDGITFIG+LC+CTH+GLVEEG SYF SM +YSI PQI
Sbjct: 396 THGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQI 455
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCMVDL RAG L A++FVKRMP+EADAVIWA LLG+CR+YKN++LAELAL++L
Sbjct: 456 EHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIV 515
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM--LGCLS 550
LEPKNPAN+V+LSNIYGDLGRWKDVAR+K+ MRDTG KKLPGCS IEVN+ V+
Sbjct: 516 LEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDE 575
Query: 551 RELDRKSIVRAEANMIKLL 569
R K I ++KLL
Sbjct: 576 RHSQSKEIYGVLKGLMKLL 594
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/559 (64%), Positives = 437/559 (78%), Gaps = 2/559 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T L ++Q Q++T G + + Y+ P ++T+ LKQM +AR +FD D V WNA+
Sbjct: 78 KTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAIS 137
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY N F+R VV LF +MK +D PNCFTFP+VLKSC KI A EGEE+HC V+K G
Sbjct: 138 RGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLE 197
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N FV T LI++YS G+AI +AYK+F M ERN+V WTSMI+GYI C + AR LF+LA
Sbjct: 198 GNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLA 257
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
PERDV+LWN +VSGYI++ +M ARKLFD MP +D +SWNTML+GYANNGDVE C++LFE
Sbjct: 258 PERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFE 317
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPERNVFSWNGLIGGYA+NG FFEVL FKRML +G V PNDAT+VTVLSACARLGALD
Sbjct: 318 EMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALD 377
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
KWVHVYA G++G++ VGNALIDMY+KCG+IENA++VF SMD KDLITWN++I GLA
Sbjct: 378 LGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLA 437
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG GA AL+LFH+MK GE PDGITFIG+LC+CTH+GLVEEG SYF SM +YSI PQI
Sbjct: 438 THGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQI 497
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCMVDL RAG L A++FVKRMP+EADAVIWA LLG+CR+YKN++LAELAL++L
Sbjct: 498 EHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIV 557
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM--LGCLS 550
LEPKNPAN+V+LSNIYGDLGRWKDVAR+K+ MRDTG KKLPGCS IEVN+ V+
Sbjct: 558 LEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDE 617
Query: 551 RELDRKSIVRAEANMIKLL 569
R K I ++KLL
Sbjct: 618 RHSQSKEIYGVLKGLMKLL 636
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/575 (61%), Positives = 436/575 (75%), Gaps = 14/575 (2%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T LHQIQ Q+VT GLE +DY+TP ITACA+L + AR++FDK N +WNAMF
Sbjct: 34 TCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFR 93
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GYAQ H VVVLF +M + A PNCFTFP+V+KSC NA +EGEE+HC+V K GF++
Sbjct: 94 GYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKS 153
Query: 134 NIFVGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
N FVG ALI +YS G + AYKVF EM ++NV WT+++ +++C D+VSAR LF+L
Sbjct: 154 NTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDL 213
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
AP+RDV+LWN +VSGYI++ +M+ AR+LFD+MP +DV+SWNT+LSGYA NG+VE +LF
Sbjct: 214 APQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLF 273
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML----------TEGRVFPNDATIVTV 301
EEMP RNV+SWNGLIGGY NGLF E L+ FKRML ++G V PND T+V V
Sbjct: 274 EEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAV 333
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L+AC+RLG L+ KWVHVYAE GY+GN+ VGNALIDMYAKCG+IE A+DVF+ +D KD+
Sbjct: 334 LTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDI 393
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
ITWNTII+GLAMHG A ALSLF MK AGE PDG+TF+GIL ACTHMGLV GL +FQS
Sbjct: 394 ITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQS 453
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M DYSIVPQIEHYGCMVDLL RAG + +AVD V++MP+E DAVIWA LLG+CR+YKNVE
Sbjct: 454 MVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVE 513
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+AELAL+RL ELEP NP NFVM+SNIY DLGR +DVAR+KVAMRDTGF+K+PGCS I N
Sbjct: 514 MAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCN 573
Query: 542 E--VVMLGCLSRELDRKSIVRAEANMIKLLPQNNH 574
+ V R + SI RA + LL + +
Sbjct: 574 DSMVEFYSLDERHPETDSIYRALQGLTILLRSHGY 608
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 298/394 (75%), Positives = 345/394 (87%)
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
E+ ++F EM ERNVV WTSMINGYI D+VSAR LF+LAPERDV+LWN +VSGYI+
Sbjct: 30 ESYREIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGG 89
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+M+EARKLF +MP +DV+ WNT+L GYA NG+VE + LFEEMPERN+FSWN LIGGYA+
Sbjct: 90 DMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAH 149
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NGLFFEVL +FKRML+E V PNDAT+VTVLSACARLGALD KWVHVYAE +G +GNV
Sbjct: 150 NGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVY 209
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VGNAL+DMYAKCGIIENA+ VF MDTKDLI+WNT+I GLAMH RGA AL+LF +MKNAG
Sbjct: 210 VGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAG 269
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+ PDGITFIGILCACTHMGLVE+G +YFQSMA DY I+PQIEHYGCMVD+LARAGRL +A
Sbjct: 270 QKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQA 329
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+ FV++MP+EAD VIWA LLG+CR+YKNVELAELAL+RL ELEPKNPAN+VMLSNIYGD
Sbjct: 330 MAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDA 389
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM 545
GRW+DVAR+KVAMRDTGFKKLPGCS IEVN+ V+
Sbjct: 390 GRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVV 423
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKIN 114
+F+++ ++N+ SWNA+ GYA N V+ F +M + D PN T VL +C ++
Sbjct: 128 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 187
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
AL G+ +H +G + N++VG AL+++Y+ IE A VF MD ++++ W ++I
Sbjct: 188 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 247
Query: 175 GYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI- 229
G A LF + D I + I+ + + + F M +I
Sbjct: 248 GLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIM 307
Query: 230 ----SWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
+ M+ A G +E+ +MP E + W GL+G
Sbjct: 308 PQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLG 350
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 27 TSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVV 86
+SGL+ + Y+ ++ A+ + A +F + ++++SWN + G A + +
Sbjct: 201 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALN 260
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
LF QMK P+ TF +L +C + + +G
Sbjct: 261 LFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 293
>gi|255586679|ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526049|gb|EEF28413.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 275/411 (66%), Positives = 343/411 (83%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T HLHQIQ+ ++ GL+ +DYITP+IIT+ A K+M +A K+FD+I + NV +WNAM
Sbjct: 77 KTLNHLHQIQSHIINHGLQFNDYITPKIITSFALFKRMRHAHKLFDQIPEPNVSNWNAML 136
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY+ N+ HR V+VLF +M +D +PNCF+FPIV+KS VKINA +EGEELHC V+K+G R
Sbjct: 137 KGYSLNDSHREVIVLFRKMISMDILPNCFSFPIVIKSSVKINAFKEGEELHCFVIKSGCR 196
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
AN FVGT LI+LYS+G+ I +AY+VFGEM ERNVV WTSMI G+I C DI +AR LFELA
Sbjct: 197 ANPFVGTMLIDLYSSGRMIVSAYRVFGEMIERNVVAWTSMIKGFILCNDIETARRLFELA 256
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P+RDV+LWN ++SGYID+ +++ A++LF +MP KDV+SWNT+L+GYAN GD+E C+RLFE
Sbjct: 257 PQRDVVLWNIMISGYIDIGDLVRAQELFHKMPNKDVMSWNTLLNGYANGGDIEACERLFE 316
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPERNVFSWNGLIGGYA++G F EVL +FKRML +G V PNDAT+VTVLSACARLGALD
Sbjct: 317 EMPERNVFSWNGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLVTVLSACARLGALD 376
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
KWVH+YA+ NGY+GNV +GNALIDMYAKCG +ENA+ VF S+D KDLI+WNT+I GLA
Sbjct: 377 LGKWVHMYAQSNGYKGNVYIGNALIDMYAKCGNVENAIVVFKSLDKKDLISWNTLIGGLA 436
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
+HGR A AL LF MK+AGE PDGITF+G+LCACTHMGLV++G SYFQSM
Sbjct: 437 VHGRAADALYLFSRMKDAGEKPDGITFLGVLCACTHMGLVDDGFSYFQSMT 487
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 22/315 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S ++ K ++ V+ SG + ++ +I + + + A ++F ++ ++NVV+W
Sbjct: 174 SVKINAFKEGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFGEMIERNVVAW 233
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVL 127
+M G+ T LF + D + + I++ + I L +EL H +
Sbjct: 234 TSMIKGFILCNDIETARRLFELAPQRDVV----LWNIMISGYIDIGDLVRAQELFHKMPN 289
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+ N L+ Y+ G IEA ++F EM ERNV W +I GY G +
Sbjct: 290 KDVMSWN-----TLLNGYANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVLS 344
Query: 188 LFELAPERDVILWN-----TIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
F+ +++ N T++S G +D+ + + K +V N ++
Sbjct: 345 SFKRMLVDGIVVPNDATLVTVLSACARLGALDLGKWVHMYAQSNGY-KGNVYIGNALIDM 403
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA G+VE +F+ + ++++ SWN LIGG A +G + L F RM G P+ T
Sbjct: 404 YAKCGNVENAIVVFKSLDKKDLISWNTLIGGLAVHGRAADALYLFSRMKDAGEK-PDGIT 462
Query: 298 IVTVLSACARLGALD 312
+ VL AC +G +D
Sbjct: 463 FLGVLCACTHMGLVD 477
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 144/361 (39%), Gaps = 71/361 (19%)
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+++ +A + +LF+++PE NV +WN ++ GY+ N EV+ F++M++ + P
Sbjct: 104 IITSFALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVLFRKMISMD-ILP 162
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK----------- 342
N + V+ + ++ A + +H + +G + N VG LID+Y+
Sbjct: 163 NCFSFPIVIKSSVKINAFKEGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVF 222
Query: 343 --------------------CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
C IE A +F +D++ WN +ISG G A
Sbjct: 223 GEMIERNVVAWTSMIKGFILCNDIETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQE 282
Query: 383 LFHEMKNAG-------------------------EMPDGITFI--GILCACTHMGLVEEG 415
LFH+M N EMP+ F G++ H G E
Sbjct: 283 LFHKMPNKDVMSWNTLLNGYANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEV 342
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA------VIWAN 469
LS F+ M +D +VP +V +L+ RL A+D K + + A + V N
Sbjct: 343 LSSFKRMLVDGIVVPN---DATLVTVLSACARLG-ALDLGKWVHMYAQSNGYKGNVYIGN 398
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
L +Y E A+ L+ K+ ++ L GR D + M+D G
Sbjct: 399 AL--IDMYAKCGNVENAIVVFKSLDKKDLISWNTLIGGLAVHGRAADALYLFSRMKDAGE 456
Query: 530 K 530
K
Sbjct: 457 K 457
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/429 (63%), Positives = 334/429 (77%), Gaps = 2/429 (0%)
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY 207
G + AYKVF EM ++NV WT+++ +++C D+VSAR LF+LAP+ DV+LWN IVSGY
Sbjct: 7 GVFVADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGY 66
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I++ +M+ AR+LFD+MP DV+SWNT+LSGYANNG+VE ++FEEMP RNV+SWNGLIG
Sbjct: 67 IELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIG 126
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY NGLF E L+ FKRML +G V PND T+V VLSAC+RLG L+ KWVHVYA+ GY+
Sbjct: 127 GYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVYADSIGYK 186
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
GN+ VGNALIDMYAKCG+IE A+DVF+ +D KD+ITWNTII+ LAMH A ALSLF M
Sbjct: 187 GNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGM 246
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
K AGE PDG+TF+GIL ACTHMGLV G +FQSM DY IVPQIEHYGCMVDLL RAG
Sbjct: 247 KRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGL 306
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ +AVD V++MP+E D VIWA LLG+CR YKNVE+AELAL+RL ELEP NP NFVMLSNI
Sbjct: 307 INQAVDIVRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIELEPNNPGNFVMLSNI 366
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM--LGCLSRELDRKSIVRAEANM 565
Y DLGR +DVAR+KVAMRDTGF+K+PGCS I N+ V+ R + SI RA +
Sbjct: 367 YKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSVVEFYSLDERHPETDSIYRALQGL 426
Query: 566 IKLLPQNNH 574
LL + +
Sbjct: 427 TILLRSHGY 435
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 52/276 (18%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--- 96
I++ +L M AR++FD++ D +V+SWN + +GYA N V +F +M +
Sbjct: 62 IVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSW 121
Query: 97 -----------------------------MPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+PN +T VL +C ++ L G+ +H
Sbjct: 122 NGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVYAD 181
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G++ N+FVG ALI++Y+ IE A VF +D ++++ W ++IN A
Sbjct: 182 SIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADALS 241
Query: 188 LFE---LAPER-DVILWNTIVS----------GYIDVRNMIEARKLFDQMPKKDVISWNT 233
LFE A ER D + + I+S G++ ++M++ D + + +
Sbjct: 242 LFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVD-----DYLIVPQIEHYGC 296
Query: 234 MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
M+ G + + + +MP E +V W L+G
Sbjct: 297 MVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGA 332
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 141/337 (41%), Gaps = 36/337 (10%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC--FTFPIVLKSC 110
A K+F ++ D+NV +W A+ H + + + D P C + +++
Sbjct: 13 AYKVFAEMRDKNVFAWTAVVAA------HVACHDMVSARRLFDLAPQCDVVLWNVIVSGY 66
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+++ + EL ++ ++ Y+ +E KVF EM RNV W
Sbjct: 67 IELGDMVAAREL----FDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWN 122
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWN--TIVS--------GYIDVRNMIEARKLF 220
+I GY+ G A F+ V++ N T+V+ G +++ +
Sbjct: 123 GLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVYA-- 180
Query: 221 DQMP-KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
D + K ++ N ++ YA G +E+ +F+ + +++ +WN +I A + + L
Sbjct: 181 DSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADAL 240
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGA-----LDFSKWVHVYAEYNGYQGNVCVGN 334
F+ M G P+ T V +LSAC +G L F V Y + C
Sbjct: 241 SLFEGMKRAGE-RPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGC--- 296
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISG 370
++D+ + G+I AVD+ M + D++ W ++
Sbjct: 297 -MVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGA 332
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
LE K +H + G + + ++ +I A+ + A +FD + +++++WN
Sbjct: 169 DLEIGKWVHVYADSI---GYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNT 225
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKN 129
+ N A + + LF MK+ P+ TF +L +C + +R G +V
Sbjct: 226 IINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDY 285
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI 173
I +++L I A + +M E +VV+W +++
Sbjct: 286 LIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALL 330
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 320/393 (81%), Gaps = 1/393 (0%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
I +A KVF EM E+NVV+WTSMINGY+ D+VSAR F+L+PERD++LWNT++SGYI++
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
NM+EAR LFDQMP +DV+SWNT+L GYAN GD+E C+R+F++MPERNVFSWNGLI GYA
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG-N 329
NG EVL +FKRM+ EG V PNDAT+ VLSACA+LGA DF KWVH Y E GY +
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V NALIDMY KCG IE A++VF + +DLI+WNT+I+GLA HG G AL+LFHEMKN
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
+G PD +TF+G+LCAC HMGLVE+GL+YF SM D+SI+P+IEH GC+VDLL+RAG L
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
+AV+F+ +MP++ADAVIWA LLG+ +VYK V++ E+ALE L +LEP+NPANFVMLSNIYG
Sbjct: 344 QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
D GR+ D AR+KVAMRDTGFKK G S IE ++
Sbjct: 404 DAGRFDDAARLKVAMRDTGFKKEAGVSWIETDD 436
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 25/330 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A K+F ++ ++NVV W +M NGY N+ L + + D P IVL + +
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNK------DLVSARRYFDLSPE---RDIVLWNTMI 97
Query: 113 INALREGEELHCLVLKNGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ G L L + ++ ++E Y+ +EA +VF +M ERNV W
Sbjct: 98 SGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNG 157
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWN----TIV------SGYIDVRNMIEARKLFD 221
+I GY G + F+ + ++ N T+V G D +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
K DV N ++ Y G +E +F+ + R++ SWN +I G A +G E L+
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVCVGNALIDM 339
F M G + P+ T V VL AC +G ++ + + ++ +++ + ++D+
Sbjct: 278 FHEMKNSG-ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFS-IMPEIEHCGCVVDL 335
Query: 340 YAKCGIIENAVDVFNSMDTK-DLITWNTII 368
++ G + AV+ N M K D + W T++
Sbjct: 336 LSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMP 98
++ A + M ++FD + ++NV SWN + GYAQN V+ F +M + +P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYKV 157
N T +VL +C K+ A G+ +H G+ + ++ V ALI++Y AIE A +V
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
F + R+++ W +MING + G A LF
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 27 TSGLEKSDY-ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
T G K D + +I + + A ++F I ++++SWN M NG A + +
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
LF +MK P+ TF VL +C + + +G
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/400 (64%), Positives = 319/400 (79%), Gaps = 1/400 (0%)
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
L+ T ++ +A KVF EM E+NVV+WTSMINGY+ D+VSAR F+L+PERD++LWNT+
Sbjct: 34 LFGTLCSMVSANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTM 93
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
V+GYI++ NM+EAR LFDQMP +DV+SWNT+L GYAN GD+E C+R+F+EM ERNVFSWN
Sbjct: 94 VAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERNVFSWN 153
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
GLI GYA NG EVL +FKRM+ EG VFPNDAT+ VLSACA+LGA DF K VH Y E
Sbjct: 154 GLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVHKYGEN 213
Query: 324 NGYQG-NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
GY +V V NALIDMY KCG IE A++VF + +DLI+WNT+I+GLA HG G AL
Sbjct: 214 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALD 273
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LFHEMKN G PD +TF+G+LCAC HMGLVE+GL+YF SM D+SI PQIEH GC+VDLL
Sbjct: 274 LFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHCGCVVDLL 333
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
+RAG L +AV+F+ +MP++ADAVIWA LLG+ +VYK V+ ELAL+ L +LEP+NPANFV
Sbjct: 334 SRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDTGELALKELIKLEPRNPANFV 393
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
MLSNIYGD GR+ D AR+KVAMRDTGFKK G S IE ++
Sbjct: 394 MLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGISWIETDD 433
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 154/353 (43%), Gaps = 28/353 (7%)
Query: 47 LKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIV 106
L M A K+F ++ ++NVV W +M NGY N+ L + + D P IV
Sbjct: 38 LCSMVSANKVFCEMVEKNVVIWTSMINGYLLNK------DLVSARRYFDLSPE---RDIV 88
Query: 107 LKSCVKINALREGEELHCLVLKNGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
L + + + G + L + ++ ++E Y+ +EA +VF EM ERN
Sbjct: 89 LWNTMVAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERN 148
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWN----TIV------SGYIDVRNMIE 215
V W +I GY G + F+ + + N T+V G D +
Sbjct: 149 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVH 208
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
K DV N ++ Y G +E +F+ + R++ SWN +I G A +G
Sbjct: 209 KYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 268
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYN-GYQGNVCV 332
E LD F M G + P+ T V VL AC +G ++ + + ++ +++ Q C
Sbjct: 269 TEALDLFHEMKNCG-ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHC- 326
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGR-GAGALSL 383
++D+ ++ G + AV+ N M K D + W T++ ++ + G L+L
Sbjct: 327 -GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDTGELAL 378
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMP 98
++ A + M ++FD++ ++NV SWN + GYAQN V+ F +M + P
Sbjct: 124 VLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFP 183
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYKV 157
N T +VL +C K+ A G+ +H G+ + ++ V ALI++Y AIE A +V
Sbjct: 184 NDATLTLVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 243
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
F + R+++ W +MING + G A LF
Sbjct: 244 FKGIKRRDLISWNTMINGLAAHGHGTEALDLF 275
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 251/383 (65%), Positives = 313/383 (81%), Gaps = 1/383 (0%)
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M E+NVV+WTSMINGY+ D+VSAR F+L+PERD++LWNT++SGYI++ NM+EAR LF
Sbjct: 1 MVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLF 60
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
DQMP +DV+SWNT+L GYAN GD+E C+R+F++MPERNVFSWNGLI GYA NG EVL
Sbjct: 61 DQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLG 120
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG-NVCVGNALIDM 339
+FKRM+ EG V PNDAT+ VLSACA+LGA DF KWVH Y E GY +V V NALIDM
Sbjct: 121 SFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDM 180
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG IE A++VF + +DLI+WNT+I+GLA HG G AL+LFHEMKN+G PD +TF
Sbjct: 181 YGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTF 240
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+LCAC HMGLVE+GL+YF SM D+SI+P+IEH GC+VDLL+RAG L +AV+F+ +MP
Sbjct: 241 VGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP 300
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
++ADAVIWA LLG+ +VYK V++ E+ALE L +LEP+NPANFVMLSNIYGD GR+ D AR
Sbjct: 301 VKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAAR 360
Query: 520 IKVAMRDTGFKKLPGCSSIEVNE 542
+KVAMRDTGFKK G S IE ++
Sbjct: 361 LKVAMRDTGFKKEAGVSWIETDD 383
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 54/360 (15%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
+EK+ + +I K + AR+ FD ++++V WN M +GY + LF
Sbjct: 2 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 61
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
QM D M N + EG Y+
Sbjct: 62 QMPCRDVM--------------SWNTVLEG-------------------------YANIG 82
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN----TIV- 204
+EA +VF +M ERNV W +I GY G + F+ + ++ N T+V
Sbjct: 83 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 142
Query: 205 -----SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
G D + K DV N ++ Y G +E +F+ + R++
Sbjct: 143 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDL 202
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWV 317
SWN +I G A +G E L+ F M G + P+ T V VL AC +G ++ + +
Sbjct: 203 ISWNTMINGLAAHGHGTEALNLFHEMKNSG-ISPDKVTFVGVLCACKHMGLVEDGLAYFN 261
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGR 376
++ +++ + ++D+ ++ G + AV+ N M K D + W T++ ++ +
Sbjct: 262 SMFTDFS-IMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK 320
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 27 TSGLEKSDY-ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
T G K D + +I + + A ++F I ++++SWN M NG A + +
Sbjct: 163 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 222
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
LF +MK P+ TF VL +C + + +G
Sbjct: 223 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 256
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/542 (42%), Positives = 345/542 (63%), Gaps = 9/542 (1%)
Query: 3 DTTGAHSEQLE---TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK 59
DTT + S L+ TT L Q+ +++ GL + +I + +T C L +Y +F+
Sbjct: 23 DTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNG 82
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
++ + V WN GY++N V LF +MK+ DA+P+ FT+P ++K+C K+ ++EG
Sbjct: 83 VSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEG 142
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
H ++ G ++FV T+LI+LY I A KVF EM ERNVV WT+MI GY S
Sbjct: 143 VAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF 202
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
D+V AR LF+ PE++ + WN I+SGY+ ++ ARK+FD+MP ++V+S+ TM+ GYA
Sbjct: 203 SDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYA 262
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
+GD+ + +FEE PER+V +W+ LI GY NG E + F M + V P++ +V
Sbjct: 263 KSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRN-VKPDEFIMV 321
Query: 300 TVLSACARLGALDFSKWVHVYAEYNG---YQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
+++SAC+++G+L+ +KWV Y + ++ +V ALIDM AKCG ++ A +F M
Sbjct: 322 SLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA--ALIDMNAKCGSMDRATKLFEEM 379
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+DLI++ +++ GL++HG G A+SLF M N G PD + F IL AC+ GLV+EG
Sbjct: 380 PKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGC 439
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
YF+SM DYSIVP +HY CMVDLL RAGRL EA + +K MP+E A W LLG+C++
Sbjct: 440 YYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKL 499
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ ++EL E+ ++L ELEP+N N+V+LSNIY +W DV+ ++ MR+ G +K+PGCS
Sbjct: 500 HCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCS 559
Query: 537 SI 538
I
Sbjct: 560 WI 561
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/530 (42%), Positives = 328/530 (61%), Gaps = 3/530 (0%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H+ ++ Q++ L Y+ P++I+A + QM A +F++I D NV +N + +
Sbjct: 38 HIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHV 97
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN F M+K + FT+P +LK+C L + +HC V K GF ++F
Sbjct: 98 QNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLF 157
Query: 137 VGTALIELYSTGK--AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V +LI+ YS + A K+F EM E+++V W SMI G + GD+ AR LF+ E
Sbjct: 158 VPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAE 217
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
RD + WNTI+ GY+ M +A LF++MP+++V+SW+TM+SGY GD+E + LF++M
Sbjct: 218 RDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKM 277
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P +N+ +W +I G+A GL E + +M G + P+D T++++L+ACA G L
Sbjct: 278 PFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAG-LKPDDGTLISILAACAESGLLVLG 336
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
K VH + + +V V NAL+DMYAKCG ++ A+ +FN M +DL++WN ++ GLAMH
Sbjct: 337 KKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMH 396
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G G A+ LF +M+ G PD +T I ILCACTH G V++GLSYF SM D+ IVP IEH
Sbjct: 397 GHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEH 456
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCM+DLL R GRL EA V+ MP+E + VIW LLG+CRV+ V LAE L+RL LE
Sbjct: 457 YGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLE 516
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+P N+ MLSNI+ G W VA +++ M+ TG +K G SSIE+++ V
Sbjct: 517 QSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEV 566
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/542 (41%), Positives = 339/542 (62%), Gaps = 24/542 (4%)
Query: 3 DTTGAHSEQLE---TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK 59
DTT + S L+ TT L Q+ +++ GL + ++ + +T C L +Y +F+
Sbjct: 23 DTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNG 82
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
++ + V WN GY++N V LF +MK+ DA+P+ FT+P ++K+C K+ ++EG
Sbjct: 83 VSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEG 142
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
H ++ G ++FV T+LI+LY I A KVF EM ERNVV WT+MI GY S
Sbjct: 143 VAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASF 202
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
D+V AR LF+ PE++ + WN I+SGY+ ++ ARK+FD+MP ++V+S+ TM+ GYA
Sbjct: 203 SDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYA 262
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
+GD+ + +FEE PER+V +W+ LI R+ E V P++ +V
Sbjct: 263 KSGDMASARFVFEEAPERDVVAWSALIF----------------RVCAEWNVKPDEFIMV 306
Query: 300 TVLSACARLGALDFSKWVHVYAEYNG---YQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
+++SAC+++G+L+ +KWV Y + ++ +V ALIDM AKCG ++ A +F M
Sbjct: 307 SLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA--ALIDMNAKCGSMDRATKLFEEM 364
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+DLI++ +++ GL++HG G A+SLF M N G PD + F IL AC+ GLV+EG
Sbjct: 365 PKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGC 424
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
YF+SM DYSIVP +HY CMVDLL RAGRL EA + +K MP+E A W LLG+C++
Sbjct: 425 YYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKL 484
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ ++EL E+ ++L ELEP+N N+V+LSNIY +W DV+ ++ MR+ G +K+PGCS
Sbjct: 485 HCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCS 544
Query: 537 SI 538
I
Sbjct: 545 WI 546
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/533 (42%), Positives = 327/533 (61%), Gaps = 3/533 (0%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ + QI QV+ + L + ++ ++I A + +QMT A +F++I D +V+ +N +
Sbjct: 29 SLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
+ +N +F +M+ + FT+P +LK+C +R E +H V K GF
Sbjct: 89 AHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCL 148
Query: 134 NIFVGTALIELYSTG--KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+IFV +LI+ Y + AA KVF M ER+ V W SMI G + G++ AR LF+
Sbjct: 149 DIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDE 208
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
PERD + WNTI+ GY+ M A +LF++MP ++V+SW+TM+ GY+ GD++ + LF
Sbjct: 209 MPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILF 268
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
++MP +N+ W +I GYA GL + ++ + +M G F +D T++++LSACA G L
Sbjct: 269 DKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKF-DDGTVISILSACAVSGLL 327
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K VH E ++ + V NALIDMYAKCG +ENA+ +F+ M KD+++WN II GL
Sbjct: 328 GLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGL 387
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG G AL LF MK G +PD +TF+G+LCACTH G V+EGL YF +M DY + P+
Sbjct: 388 AMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPE 447
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGCMVDLL R GRL EA V MP+E +A+IW LLG+CR++ LAE +RL
Sbjct: 448 VEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLV 507
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ E + N MLSNIY G W + A I++ M+ T +K G SSIEV++ V
Sbjct: 508 KSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEV 560
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 177/426 (41%), Gaps = 88/426 (20%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L C +N +++ +H VLK FVG LI +S + + A VF ++ + +V
Sbjct: 24 LHRCSSLNQVKQ---IHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 167 VVWTSMINGYIS-------------------CGDIVSARCLFELAPER------------ 195
+++ ++I ++ C D + L + +
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 196 --------DVILWNTIVSGYID--VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
D+ + N+++ Y + + ARK+F+ M ++D +SWN+M+ G G++
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELG 200
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E +RLF+EMPER+ SWN ++ GY G + F++M
Sbjct: 201 EARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPAR----------------- 243
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
NV + ++ Y+K G ++ A +F+ M K+L+ W
Sbjct: 244 -----------------------NVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWT 280
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA-M 424
+ISG A G A++L+++M+ AG D T I IL AC GL+ G S+
Sbjct: 281 IMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERT 340
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ + + ++D+ A+ G L A+ M + D V W ++ ++ + E A
Sbjct: 341 RFKCSTPVSN--ALIDMYAKCGSLENALSIFHGM-VRKDVVSWNAIIQGLAMHGHGEKAL 397
Query: 485 LALERL 490
R+
Sbjct: 398 QLFSRM 403
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+S R +L+ K +H VG LI ++ C + AV+VFN + D+
Sbjct: 21 ISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH---MGLVEEGLSY 418
+ +NT+I + A S+F EM+++G D T+ +L AC+ + +VE +
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 419 FQSMAMDYSI-VPQI---EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ M I VP ++ C +D +A A ++ E + E D V W +++G
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVM-------AERDTVSWNSMIGGL 193
Query: 475 RVYKNVELAELALER 489
V++ EL R
Sbjct: 194 -----VKVGELGEAR 203
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/527 (40%), Positives = 328/527 (62%), Gaps = 2/527 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T LHQ+ ++ GLE+ ++ + I+A + ++Y+ +FD++ + WN++
Sbjct: 40 KTHIDLHQVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLV 99
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+GY ++ L+ +MK+ D P+ +TFP +LK C + EG LH +L+ G
Sbjct: 100 SGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVD 159
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+I+V T+L+ LY G I+ A KVF M ERNVV WT+MI GY S G++V A+ LF+L
Sbjct: 160 EDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLM 219
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
PER+V WN I+ GY+ + ++ A K FD+MP+K+V+S+ TM+ GYA GD+ + LF+
Sbjct: 220 PERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQ 279
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ PER++ +W+ LI GY NG E + F M + V P+ + +++ AC++LG LD
Sbjct: 280 KAPERDIIAWSALISGYTQNGQPNEAVKTFLEM-SSRNVKPDKFVLTSLMLACSQLGNLD 338
Query: 313 FSKWVHVYAEYNGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+KWV YA V ALIDM AKCG +E A+ +F M +DLI++ +++ GL
Sbjct: 339 LAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGL 398
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
++HG G A+SLF M PD + F IL AC+ GLV+EG YF+ M YS+VP
Sbjct: 399 SIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPS 458
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HY C+VDLL+R+GRL EA + +K +P+++ A W LLG+C++Y + ELAE+ RL
Sbjct: 459 VDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLI 518
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
E+EP+N N+V+LSNIY RW DV+ ++ M + G +K+PGCS I
Sbjct: 519 EIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI 565
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/576 (39%), Positives = 334/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I Q++ +GL ++Y ++I C + YA +F+ I + N++ WN
Sbjct: 13 KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWN 72
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PNC+TFP +LKSC K A REG+++H VLK
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKL 132
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G+ +++V T+LI +Y +E A KVF + R+VV +T++I GY S G I SA+ +F
Sbjct: 133 GYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMF 192
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------------------------ 225
+ P +DV+ WN ++SGY + N EA +LF +M K
Sbjct: 193 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 252
Query: 226 --KDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V SW N ++ Y G+VE LFE + ++V SWN LIGGY
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 312
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY--AEYNGYQG 328
+ L+ E L F+ ML G PND T++++L ACA LGA++ +W+HVY G
Sbjct: 313 HMNLYKEALLLFQEMLRSGES-PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 371
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+LIDMYAKCG IE A VF+S+ + L +WN +I G AMHGR A +F M+
Sbjct: 372 ASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 431
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
PD ITF+G+L AC+H G+++ G F+SM DY I P++EHYGCM+DLL +G
Sbjct: 432 KNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLF 491
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + M +E D VIW +LL +C++Y NVEL E + L ++EPKNP ++V+LSNIY
Sbjct: 492 KEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIY 551
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW +VA+I+ + D G KK+PGCSSIE++ VV
Sbjct: 552 ATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 587
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 154/360 (42%), Gaps = 33/360 (9%)
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE----RNVFSWNGLIGGYAN 271
A +F+ + + +++ WNTM G+A + D L+ M N +++ L+ A
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVL-SACARLGALDFSKWVHVYAEYNGYQGNV 330
+ F E +L G + D + T L S + G L+ ++ V + + +V
Sbjct: 116 SKAFREGQQIHGHVLKLG--YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR----DV 169
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
ALI YA G I +A +F+ + KD+++WN +ISG A G AL LF EM
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD T + ++ AC +E G S D+ ++ ++DL + G +
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EPKNPANFVMLSNIY 508
A + + + D + W L+G Y ++ L + AL E+ ++P + MLS +
Sbjct: 289 ACGLFEGLSYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 344
Query: 509 G-------DLGRWKDV---ARIK-----VAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
++GRW V R+K + R + C IE + V L+R L
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/576 (40%), Positives = 326/576 (56%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVSWNA 70
+T + L QI +Q++ +GL + + ++I CA ++YA +F I + N V WN
Sbjct: 39 KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNH 98
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G + +E + + M PN +TFP + KSC KI EG+++H VLK G
Sbjct: 99 MIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLG 158
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
N FV T+LI +Y+ + A VF + R+ V +T++I GY S G + AR LF+
Sbjct: 159 LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFD 218
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI--------------------- 229
P RDV+ WN ++SGY + EA F++M + V
Sbjct: 219 EIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQ 278
Query: 230 ------SW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
SW N ++ Y GD+EE LFE++ ++NV SWN +IGGY
Sbjct: 279 LGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYT 338
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN--GYQG 328
+ + E L F+RM+ + + PND T +++L ACA LGALD KWVH Y + N +
Sbjct: 339 HMSCYKEALGLFRRMM-QSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKN 397
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
V + +LIDMYAKCG + A +F+ M+TK L TWN +ISG AMHG AL LF M
Sbjct: 398 TVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMT 457
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+ G +PD ITF+G+L AC H GL+ G YF SM DY + P++ HYGCM+DL RAG
Sbjct: 458 SEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLF 517
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA VK M ++ D IW +LLG+CR+++ +ELAE + L ELEP+NP+ +V+LSNIY
Sbjct: 518 DEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIY 577
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW+DVA+I+ + D KK+PGCSSIEV+ VV
Sbjct: 578 AGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVV 613
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/571 (39%), Positives = 331/571 (57%), Gaps = 45/571 (7%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
L I Q++ +GL ++Y ++I C + YA +F+ I + N++ WN MF G
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+A + + + L+ M L +PNC+TFP +LKSC K A REG+++H VLK G+ +
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
++V T+LI +Y +E A KVF + R+VV +T++I GY S G I SA+ +F+ P
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPK--------------------------KDV 228
+DV+ WN ++SGY + N EA +LF +M K + V
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 229 ISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
SW N ++ Y G+VE LFE + ++V SWN LIGGY + L+
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY--AEYNGYQGNVCVG 333
E L F+ ML G PND T++++L ACA LGA++ +W+HVY G
Sbjct: 303 KEALLLFQEMLRSGES-PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LIDMYAKCG IE A VF+S+ + L +WN +I G AMHGR A +F M+
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+G+L AC+H G+++ G F+SM DY I P++EHYGCM+DLL +G EA +
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEE 481
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+ M +E D VIW +LL +C+++ NVEL E + L ++EPKNP ++V+LSNIY GR
Sbjct: 482 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGR 541
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
W +VA+I+ + D G KK+PGCSSIE++ VV
Sbjct: 542 WNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 572
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 154/360 (42%), Gaps = 33/360 (9%)
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE----RNVFSWNGLIGGYAN 271
A +F+ + + +++ WNTM G+A + D L+ M N +++ L+ A
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVL-SACARLGALDFSKWVHVYAEYNGYQGNV 330
+ F E +L G + D + T L S + G L+ ++ V + + +V
Sbjct: 101 SKAFREGQQIHGHVLKLG--YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR----DV 154
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
ALI YA G I +A +F+ + KD+++WN +ISG A G AL LF EM
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD T + ++ AC +E G S D+ ++ ++DL + G +
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EPKNPANFVMLSNIY 508
A + + + D + W L+G Y ++ L + AL E+ ++P + MLS +
Sbjct: 274 ACGLFEGLSYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329
Query: 509 G-------DLGRWKDV---ARIK-----VAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
++GRW V R+K + R + C IE + V L+R L
Sbjct: 330 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 389
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/571 (39%), Positives = 332/571 (58%), Gaps = 45/571 (7%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
L I Q++ +GL ++Y ++I C + YA +F+ I + N++ WN MF G
Sbjct: 6 LRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 65
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+A + + + L+ M L +PN +TFP +LKSC K A +EG+++H VLK G +
Sbjct: 66 HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
++V T+LI +Y +E A+KVF E R+VV +T++I GY S G I +A+ +F+ P
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPK--------------------------KDV 228
+DV+ WN ++SGY + N EA +LF M K + V
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 229 ISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
SW N ++ Y+ G++E LFE +P ++V SWN LIGGY + L+
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLY 305
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQGNVCVG 333
E L F+ ML G PND T++++L ACA LGA+D +W+HVY + G +
Sbjct: 306 KEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LIDMYAKCG IE A VFNS+ K L +WN +I G AMHGR + +F M+ G
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+G+L AC+H G+++ G F+SM DY + P++EHYGCM+DLL +G EA +
Sbjct: 425 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 484
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+ M +E D VIW +LL +C+++ NVEL E + L ++EP+NP ++V+LSNIY GR
Sbjct: 485 MINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGR 544
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
W +VA + + D G KK+PGCSSIE++ VV
Sbjct: 545 WNEVANTRALLNDKGMKKVPGCSSIEIDSVV 575
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 184/407 (45%), Gaps = 52/407 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K QI V+ G + Y+ +I+ Q ++ A K+FD+ ++VVS+ A+ GY
Sbjct: 108 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGY 167
Query: 76 AQNEF-------------------------------HRTVVVLFTQMKKLDAMPNCFTFP 104
A + ++ + LF M K + P+ T
Sbjct: 168 ASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 227
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
V+ +C + ++ G ++H + +GF +N+ + ALI+LYS +E A +F + +
Sbjct: 228 TVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK 287
Query: 165 NVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDVRNMIE 215
+V+ W ++I GY A LF+ DV + + + + G ID+ I
Sbjct: 288 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 347
Query: 216 ARKLFDQMPK--KDVISWNT-MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
D+ K + S T ++ YA GD+E ++F + +++ SWN +I G+A +
Sbjct: 348 V--YIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 405
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY-NGYQGNVC 331
G D F RM G + P+D T V +LSAC+ G LD + H++ Y+
Sbjct: 406 GRADASFDIFSRMRKNG-IEPDDITFVGLLSACSHSGMLDLGR--HIFRSMTQDYKMTPK 462
Query: 332 VGN--ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ + +ID+ G+ + A ++ N+M+ + D + W +++ MHG
Sbjct: 463 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 509
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/604 (37%), Positives = 344/604 (56%), Gaps = 60/604 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ + + L Q Q+ GL+ SD++ P++IT + + YA
Sbjct: 10 QHCKNIRELKQTHLQIFIHGLQHSDFMLPKLITVSSAFNLLDYAT--------------- 54
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
H+ + ++++MK L N FTF +LK AL +G +H +LK
Sbjct: 55 -----------HKEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKL 103
Query: 130 GFRANIFVGTALIELYST-GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GF +++FV +L+ Y+ + + +AY+VF EM ER+V+ W SMI+ Y++ G+I SA L
Sbjct: 104 GFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGL 163
Query: 189 FELAPERDVILWNTIV-------------------------------SGYIDVRNMIEAR 217
+ PER+++ WN++V SGY+ + ++ A+
Sbjct: 164 LDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQ 223
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+F QMP+K V+SW M+SGYA NGD++ + +F MP +NV SWN +I GY +N F +
Sbjct: 224 SIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQ 283
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
L F ML G P+ T++++LSACA LG+L+ KW++ Y + N ++ +GNALI
Sbjct: 284 ALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALI 343
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
DM+AKCG +ENA +VF+ M + +ITW T++SGLA++G+ A++LF +M G PD +
Sbjct: 344 DMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDV 403
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
FI +L ACTH GLVEEG F M ++ I P+IEHYGCMVDLL RAG+L EAV F R
Sbjct: 404 IFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTAR 463
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
M ++ +AVIWA LL C+++ N +L + E++ + EP NP+ ++SN+ GRW+DV
Sbjct: 464 MHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDV 523
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV--MLGCLSRELDRKSIVRAEANMIKLLPQNNHP 575
+VAMR +K+PGCSSI+V V L +R + RK I RA ++ P
Sbjct: 524 LSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRALSHYKNATEMETTP 583
Query: 576 LTFI 579
F+
Sbjct: 584 FGFL 587
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/575 (40%), Positives = 330/575 (57%), Gaps = 45/575 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ ++L QI +Q++ +GL + + ++I CA ++YA +F+ I N WN
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNT 102
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G + + + + +M PN +TFP +LKSC K+ A +EG+++H VLK G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++ FV T+LI +Y+ + A VF + R+ V +T++I GY G + AR LFE
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI--------------------- 229
P RD + WN +++GY EA F +M + +V
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL 282
Query: 230 -----SW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
SW N ++ Y+ GD+++ + LFE + E+++ SWN +IGGY++
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--N 329
+ E L F++M + V PND T V++L ACA LGALD KW+H Y + + G N
Sbjct: 343 MNSYKEALALFRKM-QQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID-KKFLGLTN 400
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ +LIDMYAKCG IE A VF M K L +WN +ISGLAMHG AL LF +M++
Sbjct: 401 TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRD 460
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G PD ITF+G+L AC+H GLVE G F SM DY I P+++HYGCM+DLL RAG
Sbjct: 461 EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFD 520
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA +K M ++ D IW +LLG+CRV+ NVEL E A + L ELEP+NP +V+LSNIY
Sbjct: 521 EAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYA 580
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW DVARI+ + D G KK+PGCSSIEV+ VV
Sbjct: 581 TAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVV 615
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/531 (41%), Positives = 325/531 (61%), Gaps = 4/531 (0%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+ Q+ Q++ S L ++ P++I+A + +QM A F+++ NV +N M ++
Sbjct: 35 QVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHS 94
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N F M++ + FTFP +LK C L E +H + K GF +++F
Sbjct: 95 HNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVF 154
Query: 137 VGTALIELYSTGKA--IEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLFELAP 193
V +LI+ YS + I AA K+F M R+VV W SMI+G G AR +F+ P
Sbjct: 155 VPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMP 214
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
E+D I WNT++ GY+ V M +A KLFD+MP+++V+SW+TM+ GY GD+E + LF++
Sbjct: 215 EKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDK 274
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP +N+ SW ++ G+A GL E + F +M + + ++ T++++L+ACA G L
Sbjct: 275 MPVKNLVSWTIIVSGFAEKGLAREAISLFDQM-EKACLKLDNGTVMSILAACAESGLLGL 333
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ +H + N ++ + NAL+DMYAKCG + A DVFN + KD+++WN ++ GLAM
Sbjct: 334 GEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAM 393
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G AL LF MK G P+ +T IG+LCACTH GL+++G+ YF +M DY++VP++E
Sbjct: 394 HGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVE 453
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HYGCMVDLL R GRL EA+ ++ MP+ +A+IW LLG+CR++ VELA L+ L EL
Sbjct: 454 HYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVEL 513
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EP + NF MLSNIY G W VA ++ MR G KK G SSIEVN V
Sbjct: 514 EPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEV 564
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/576 (39%), Positives = 334/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I Q++ +GL ++Y R++ C + YA +F+ I + N++ WN
Sbjct: 13 KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWN 72
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PN +TFP +LKSC K+ +EG+++H VLK
Sbjct: 73 TMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKL 132
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G+ +++V T+LI +Y + A+KVF R+VV +T++I GY S G I SA+ +F
Sbjct: 133 GYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMF 192
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------------------------ 225
+ P +DV+ WN I+SGY D N EA LF +M K
Sbjct: 193 DEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQ 252
Query: 226 --KDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V SW N ++ Y+ G+VE LF+ + ++V SWN +IGGY
Sbjct: 253 LGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYT 312
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQG 328
+ L+ E L F+ ML G PND T++++L ACA+LGA+DF +W+HVY + G
Sbjct: 313 HLNLYKEALLLFQEMLRSGEN-PNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTN 371
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ +LIDMYAKCG IE A VFNSM + L N +I G AMHGR A +F M+
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMR 431
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G PD ITF+G+L AC+H G+++ G F+SM +Y I P++EHYGCM+DLL G
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLF 491
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + M +E D VIW +LL +C+++ NVEL E ++L ++EP+NP ++V+LSNIY
Sbjct: 492 KEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIY 551
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW +VA I+ + D G KK+PGCSSIE++ VV
Sbjct: 552 ATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVV 587
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 183/411 (44%), Gaps = 50/411 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L+ +K QI V+ G E Y+ +I+ + + A K+FD + ++VVS+ A
Sbjct: 115 KLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTA 174
Query: 71 MFNGYAQNEF-------------------------------HRTVVVLFTQMKKLDAMPN 99
+ GYA + ++ + LF +M K + P+
Sbjct: 175 LITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPD 234
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V+ +C + +++ G ++H + +G +N+ + ALI+LYS +E A +F
Sbjct: 235 ESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQ 294
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDV 210
+ ++V+ W +MI GY A LF+ DV + + + + G ID
Sbjct: 295 GLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDF 354
Query: 211 RNMIEARKLFDQMPK--KDVISWNT-MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I D+ K + S T ++ YA GD+E ++F M R + + N +I
Sbjct: 355 GRWIHV--YIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIF 412
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+A +G D F RM G + P+D T V +LSAC+ G LD + + N Y+
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNG-IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQN-YK 470
Query: 328 GNVCVGN--ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ + +ID+ G+ + A ++ N+M + D + W +++ MHG
Sbjct: 471 ITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHG 521
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/576 (39%), Positives = 333/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I Q++ +GL ++Y +++ C + YA +F+ I + N++ WN
Sbjct: 44 KTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWN 103
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PN +TFP +LKSC K A +EG+++H VLK
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G+ ++FV T+LI +Y +E A KVF R+VV +T++I GY S G I SA+ LF
Sbjct: 164 GYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLF 223
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------------------------ 225
+ P +DV+ WN ++SGY + N EA +LF +M K
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIE 283
Query: 226 --KDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V SW N+++ Y+ G++E LFE + ++V SWN LIGGY
Sbjct: 284 LGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYT 343
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQG 328
+ L+ E L F+ ML G PND T++++L ACA LGA+D +W+HVY +
Sbjct: 344 HMNLYKEALLLFQEMLRSGER-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATN 402
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ +LIDMYAKCG IE A VFNS+ K L +WN +I G AMHGR A +F M+
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMR 462
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G PD ITF+G+L AC+ G+++ G F++M DY I P++EHYGCM+DLL +G
Sbjct: 463 KIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLF 522
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + M +E D VIW +LL +C++ NVEL E + L ++EP+NP +V+LSNIY
Sbjct: 523 KEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIY 582
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW +VA+I+ + D G KK+PGCSSIE++ VV
Sbjct: 583 ATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 618
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 162/373 (43%), Gaps = 35/373 (9%)
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE----RN 258
++S + D + A +F+ + + +++ WNTM G+A + D +L+ M N
Sbjct: 76 VISPHFD--GLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL-SACARLGALDFSKWV 317
+++ L+ A + F E +L G + D + T L S + G L+ ++ V
Sbjct: 134 SYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG--YDLDLFVHTSLISVYVQNGRLEDARKV 191
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
+ + +V ALI YA G IE+A +F+ + KD+++WN +ISG A G
Sbjct: 192 FDRSPHR----DVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL LF EM PD T + ++ AC G +E G S D+ ++
Sbjct: 248 KEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELG-RQVHSWIDDHGFGSNLKIVNS 306
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EP 495
++DL ++ G L A + + + D + W L+G Y ++ L + AL E+
Sbjct: 307 LMDLYSKCGELETACGLFEGL-LYKDVISWNTLIGG---YTHMNLYKEALLLFQEMLRSG 362
Query: 496 KNPANFVMLSNIYG-------DLGRWKDV---ARIKVA-----MRDTGFKKLPGCSSIEV 540
+ P + MLS + D+GRW V R+K A +R + C IE
Sbjct: 363 ERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEA 422
Query: 541 NEVVMLGCLSREL 553
V L + L
Sbjct: 423 AHQVFNSILHKSL 435
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH ++ + +H + + S S T +I A+ + A ++F+ I +++
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKSATNASSLRT-SLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWNAM G+A + +F++M+K+ P+ TF +L +C + L G + +
Sbjct: 437 SWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496
Query: 127 LKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISC 179
++ + +I+L + A ++ M+ E + V+W S+ I G +
Sbjct: 497 TQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVEL 556
Query: 180 GDIVSARCLFELAPE 194
G+ A+ L ++ PE
Sbjct: 557 GESF-AQNLIKIEPE 570
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 339/577 (58%), Gaps = 42/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
++ KHL Q+ ++ +GL ++ TACA + YA K+FD+I N+ +
Sbjct: 38 DKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYT 97
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + +A + +++F QM + PN +TFP V+K+ ++++L G+ +H +V
Sbjct: 98 WNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMV 157
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K F +++F+ +LI YS+ +++AY VF ++ E+++V W SMI+G++ G A
Sbjct: 158 MKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEAL 217
Query: 187 CLFE------LAPER---------------------------------DVILWNTIVSGY 207
LF+ P R ++IL N ++ Y
Sbjct: 218 QLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMY 277
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ ++ +AR+LFD+M +KD++SW TM+ GYA GD + +R+F+ MP ++ +WN LI
Sbjct: 278 VKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALIS 337
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
Y NG E L F+ + PN+ T+ + L+ACA+LGA+D W+HVY + G +
Sbjct: 338 SYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIK 397
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N + +LIDMY+KCG +E A++VF S++ +D+ W+ +I+GLAMHG G A+ LF +M
Sbjct: 398 LNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKM 457
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ P+ +TF +LCAC+H GLV+EG +F M Y +VP +HY CMVD+L RAG
Sbjct: 458 QETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGC 517
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EAV+ +++MPI A +W LLG+CR+Y NVELAE+A RL E + N +V+LSNI
Sbjct: 518 LEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNI 577
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y G+W V+R++ M+ +G +K PGCSSIEVN ++
Sbjct: 578 YAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGII 614
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 213/461 (46%), Gaps = 69/461 (14%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGF------RANIFVGTALIELYSTGKAIE 152
N T PI++ C L++ LH +L+ G +F AL S+ +++
Sbjct: 29 NPSTVPILIDKCANKKHLKQ---LHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLD 81
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISC-----GDIVSARCLFELAPERDVILWNTIVSGY 207
A KVF ++ N+ W ++I + S G +V + L E + + ++
Sbjct: 82 YACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAA 141
Query: 208 IDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
+V +++ + + + K D+ N+++ Y++ GD++ +F ++ E+++ SWN
Sbjct: 142 TEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWN 201
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G+ G E L FKRM E PN T+V VLSACA+ L+F +W Y E
Sbjct: 202 SMISGFVQGGSPEEALQLFKRMKMEN-ARPNRVTMVGVLSACAKRIDLEFGRWACDYIER 260
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA----------- 372
NG N+ + NA++DMY KCG +E+A +F+ M+ KD+++W T+I G A
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRV 320
Query: 373 --------------------MHGRGAGALSLFHEMK-NAGEMPDGITFIGILCACTHMGL 411
+G+ AL++F E++ N P+ +T L AC +G
Sbjct: 321 FDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380
Query: 412 VEEG--LSYF---QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
++ G + + Q + +++ I ++D+ ++ G L +A++ + D +
Sbjct: 381 MDLGGWIHVYIKKQGIKLNFHITTS------LIDMYSKCGHLEKALEVFYSVE-RRDVFV 433
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
W+ ++ ++ + A ++ E + K N V +N+
Sbjct: 434 WSAMIAGLAMHGHGRAAIDLFSKMQETKVK--PNAVTFTNL 472
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/536 (41%), Positives = 322/536 (60%), Gaps = 42/536 (7%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++YA +F+ I + N++ WN MF G+A N T + L+ M L +PN ++FP +LKS
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C K AL EG+++H VLK G+ +++V T+LI +Y+ +E A+KVF R+VV +
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
T++I GY S G I +AR LF+ +DV+ WN ++SGY++ N EA +L+ M K +V
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 230 --------------------------SW-------------NTMLSGYANNGDVEECKRL 250
SW N ++ Y+ G+VE L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ + +++V SWN LIGG+ + L+ E L F+ ML G PND T+++VL ACA LGA
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES-PNDVTMLSVLPACAHLGA 313
Query: 311 LDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+D +W+HVY G + +LIDMYAKCG IE A VF+SM T+ L +WN +I
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G AMHG+ A LF +M+ G PD ITF+G+L AC+H G+++ G F+SM+ DY I
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKI 433
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P++EHYGCM+DLL G EA + ++ MP+E D VIW +LL +C+++ NVEL E +
Sbjct: 434 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQ 493
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++EP+NP ++V+LSNIY GRW VA+I+ + D G KK PGCSSIE++ VV
Sbjct: 494 NLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVV 549
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 218/472 (46%), Gaps = 72/472 (15%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A + ARK+FD+I+ ++VVSWNAM +GY + + + L+ M K + P+
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V+ +C + ++ G +LH + +GF +NI + LI+LYS +E A +F
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDV 210
+ +++V+ W ++I G+ A LF+ DV + + + + G ID+
Sbjct: 257 GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 316
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSG----YANNGDVEECKRLFEEMPERNVFSWNGLI 266
I ++ K V + +++L+ YA GD+E K++F+ M R++ SWN +I
Sbjct: 317 GRWIH---VYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN-G 325
G+A +G D F +M G + P+D T V +LSAC+ G LD + H++ +
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNG-IDPDDITFVGLLSACSHSGMLDLGR--HIFRSMSQD 430
Query: 326 YQGNVCVGN--ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
Y+ + + +ID+ CG+ + A ++ +M +
Sbjct: 431 YKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPME------------------------ 466
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE-HYGCMVDLL 442
PDG+ + +L AC VE G SY Q++ I P+ Y + ++
Sbjct: 467 ----------PDGVIWCSLLKACKMHNNVELGESYAQNLI---KIEPENPGSYVLLSNIY 513
Query: 443 ARAGRLAEAVDF--------VKRMP----IEADAVIWANLLGSCRVYKNVEL 482
A AGR + +K+ P IE D+V+ ++G +N E+
Sbjct: 514 ATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREI 565
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 24/265 (9%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S +E + LH + + G + I +I ++ ++ A +F + ++V+
Sbjct: 208 AQSGSIELGRQLH---SWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVI 264
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN + G+ ++ ++LF +M + PN T VL +C + A+ G +H +
Sbjct: 265 SWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYI 324
Query: 127 LK--NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
K G + T+LI++Y+ IEAA +VF M R++ W +MI G+ G +
Sbjct: 325 NKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANA 384
Query: 185 ARCLFELAPERDV---------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----- 230
A LF + + +L SG +D+ R +F M + I+
Sbjct: 385 AFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDL-----GRHIFRSMSQDYKITPKLEH 439
Query: 231 WNTMLSGYANNGDVEECKRLFEEMP 255
+ M+ + G +E K + MP
Sbjct: 440 YGCMIDLLGHCGLFKEAKEMIRTMP 464
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/576 (39%), Positives = 332/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I +++ +GL ++Y ++I +TYA +FD I + N++ WN
Sbjct: 13 KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWN 72
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PN +TFP +LK+C K A REG+++H VLK
Sbjct: 73 TMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKL 132
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G +++V T+LI +Y E A KVF + R+VV +T++I GY S G I SA+ +F
Sbjct: 133 GCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMF 192
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------------------------ 225
+ P +DV+ WN ++SGY + N EA +LF +M K
Sbjct: 193 DEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIE 252
Query: 226 --KDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V SW N ++ Y G+VE LFE + ++V SWN LIGGY
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYT 312
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQG 328
+ L+ E L F+ ML G PN+ T++++L ACA LGA+D +W+HVY + G
Sbjct: 313 HMNLYKEALLLFQEMLRSGES-PNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSN 371
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ +LIDMYAKCG IE A VF+SM + L +WN +I G AMHGR A +F M+
Sbjct: 372 PSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMR 431
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G PD ITF+G+L AC+H G+++ G F+SM DY I P++EHYGCM+DLL +G
Sbjct: 432 KDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLF 491
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + M ++ D VIW +LL +C+++ NVEL E + L ++EPKN ++V+LSNIY
Sbjct: 492 KEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIY 551
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW +VA+ + + D G KK+PGCSSIE++ VV
Sbjct: 552 ATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVV 587
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/560 (39%), Positives = 324/560 (57%), Gaps = 45/560 (8%)
Query: 29 GLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
GL ++Y +++ C + YA +F I + N +SWN M G+A + + +
Sbjct: 4 GLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISAL 63
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
L+ M L PN +TFP + KSC K A +EG+++H +LK G ++ V T+LI +Y
Sbjct: 64 NLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMY 123
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ +E A+KVF R+VV +T+MI GY S G++ A+ +F+ P +DV+ WN ++S
Sbjct: 124 AQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMIS 183
Query: 206 GYIDVRNMIEARKLFDQMPKKDVI--------------------------SW-------- 231
GY ++ EA +LF++M K DV SW
Sbjct: 184 GYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGS 243
Query: 232 -----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
N ++ Y+ G++E LFE + ++V SWN LIGGYA E L F+ ML
Sbjct: 244 NLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEML 303
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCG 344
G PND T++++L ACA LGA+D +W+HVY + G N + +LIDMYAKCG
Sbjct: 304 KLGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG 362
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
IE A VF+++ K L + N +I G AMHGR A L MK G PD ITF+G+L
Sbjct: 363 NIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+H GL + G F+SM +DY I P++EHYGCM+DLL R+G EA + + M +E D
Sbjct: 423 ACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDG 482
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
VIW +LL +C+++KN+EL EL ++L ++EPKNP ++V+LSNIY RW DVAR++ +
Sbjct: 483 VIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLL 542
Query: 525 RDTGFKKLPGCSSIEVNEVV 544
D G KK+PGCSSIE++ +V
Sbjct: 543 NDKGLKKVPGCSSIEIDSMV 562
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 184/402 (45%), Gaps = 52/402 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY---- 75
QI Q++ GL ++ +I+ AQ + A K+FD + ++VVS+ AM GY
Sbjct: 99 QIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG 158
Query: 76 ----AQNEF-----------------------HRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
AQ F ++ + LF +M K+D P+ T VL
Sbjct: 159 NMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLS 218
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+C + G ++H + +GF +N+ + ALI+LYS +E A+ +F + ++V+
Sbjct: 219 TCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVIS 278
Query: 169 WTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDVRNMIEARKL 219
W ++I GY A +F+ DV + + + + G ID+ I +
Sbjct: 279 WNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIH---V 335
Query: 220 FDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
+ K +I+ +++ YA G++E ++F+ + +++ S N +I G+A +G
Sbjct: 336 YIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRA 395
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV--HVYAEYNGYQGNVCVG 333
D RM +G + P+D T V +LSAC+ G D + + + +Y + +
Sbjct: 396 DAAFDLLSRMKKDG-IEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR-IEPKLEHY 453
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ID+ + G+ + A ++ NSM + D + W +++ +H
Sbjct: 454 GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIH 495
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T HS +E + QI + + G + + +I ++ +M A +F+ + +
Sbjct: 218 STCTHSGNVELGR---QIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK 274
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+V+SWN + GYA H+ +++F +M KL PN T +L +C + A+ G +H
Sbjct: 275 DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIH 334
Query: 124 CLVLK--NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+ K G N + T+LI++Y+ IEAA +VF + +++ +MI G+ G
Sbjct: 335 VYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 331/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I Q++ +GL ++Y +++ C + YA +FD I + ++ WN
Sbjct: 13 KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWN 72
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PN +TFP +LKSC K A +EG++LH VLK
Sbjct: 73 TMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKF 132
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++++ T+LI +Y +E A KV + R+VV +T++I GY S G I SA +F
Sbjct: 133 GFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMF 192
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------------------------ 225
+ P +DV+ WN +SGY + N EA +LF +M K
Sbjct: 193 DEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIE 252
Query: 226 --KDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V SW N ++ Y+ G++E LF+ + ++V SWN LIGGY
Sbjct: 253 LGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYT 312
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQG 328
+ L+ E L F+ ML G PND T++++LSACA LGA+D +W+HVY + G
Sbjct: 313 HMNLYKEALLLFQDMLRSGEK-PNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTN 371
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ +LIDMYAKCG IE A VF+SM + L +WN +I G AMHGR A +F M+
Sbjct: 372 ASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 431
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G PD ITF+G+L AC+H G+++ G F+SM DY ++P++EHYGCM+DL +G
Sbjct: 432 KNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLF 491
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + M +E D VIW +LL +C+++ NVEL E + L ++EP+NP ++V+LSNIY
Sbjct: 492 KEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIY 551
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RW +VA+ + + D G KK+PGCSSIE++ VV
Sbjct: 552 ATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 587
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 156/360 (43%), Gaps = 33/360 (9%)
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE----RNVFSWNGLIGGYAN 271
A +FD + + ++ WNTM G+A + D +L+ M N +++ L+ A
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVL-SACARLGALDFSKWVHVYAEYNGYQGNV 330
+ F E ++L G F D I T L S + G L+ ++ V + + +V
Sbjct: 116 SXAFKEGQQLHGQVLKFG--FDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHR----DV 169
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
ALI YA G IE+A +F+ + KD+++WN ISG A G AL LF +M
Sbjct: 170 VSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKT 229
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD T + +L AC G +E G S D+ ++ ++DL ++ G L
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELG-RQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EPKNPANFVMLSNIY 508
A + + D + W L+G Y ++ L + AL ++ + P + MLS +
Sbjct: 289 ACGLFQGLS-NKDVISWNTLIGG---YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344
Query: 509 G-------DLGRWKDV---ARIK-----VAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
D+GRW V R+K ++R + C IE + V L+R L
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/531 (40%), Positives = 326/531 (61%), Gaps = 5/531 (0%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
++QI QV+ + L + ++ P++I A + + + A +F+ + NV +N++ +A
Sbjct: 37 VNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAH 96
Query: 78 NEFHRTVVV-LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N HR++ F QM+K P+ FT+P +LK+C ++L +H V K GF +IF
Sbjct: 97 NSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIF 156
Query: 137 VGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V +LI+ YS ++ A +F M+ER+VV W SMI G + CG++ A LF+ P+
Sbjct: 157 VPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPD 216
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
RD++ WNT++ GY M A +LF++MP ++++SW+TM+ GY+ GD++ + LF+
Sbjct: 217 RDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRC 276
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P +NV W +I GYA GL E + + +M E + P+D ++++L+ACA G L
Sbjct: 277 PVKNVVLWTTIIAGYAEKGLAREATELYGKM-EEAGMRPDDGFLLSILAACAESGMLGLG 335
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAM 373
K +H ++ V NA IDMYAKCG ++ A DVF+ M KD+++WN++I G AM
Sbjct: 336 KRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAM 395
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G AL LF M G PD TF+G+LCACTH GLV EG YF SM Y IVPQ+E
Sbjct: 396 HGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVE 455
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HYGCM+DLL R G L EA ++ MP+E +A+I LL +CR++ +V+LA E+L +L
Sbjct: 456 HYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFKL 515
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EP +P N+ +LSNIY G W +VA +++ M++TG +K G SSIEV E V
Sbjct: 516 EPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEV 566
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
LD +H ++ V LI ++ C + +AV+VFN + ++ +N+II
Sbjct: 34 LDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRA 93
Query: 371 LAMHGRGAGALSL--FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
A H +L F +M+ G PD T+ +L AC+ G S + M ++
Sbjct: 94 HA-HNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACS-------GPSSLPLVRMIHAH 145
Query: 429 VPQIEHYG------CMVDLLARAGR--LAEAVDFVKRMPIEADAVIWANLLG 472
V +I YG ++D +R G L A+ M E D V W +++G
Sbjct: 146 VEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAME-ERDVVTWNSMIG 196
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/536 (41%), Positives = 317/536 (59%), Gaps = 42/536 (7%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+ YA +F+ I + N + WN M G+A + + + L+ M L +PN +TFP +LKS
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C K EG+++H VLK GF +++V T+LI +Y +E AYKVF R+VV +
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK---- 225
T++I GY S GDI SA+ LF+ P +DV+ WN ++SGY + EA +LF++M K
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 226 ----------------------KDVISW-------------NTMLSGYANNGDVEECKRL 250
+ V SW N ++ Y+ G+VE L
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ + ++V SWN LIGGY + L+ E L F+ ML G PND T+++VL ACA LGA
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSVLPACAHLGA 312
Query: 311 LDFSKWVHVYAE--YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+D +W+HVY + G + +LIDMYAKCG IE A VFNSM K L +WN +I
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G AMHGR + LF M+ G PD ITF+G+L AC+H G+++ G F+SM DY +
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 432
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P++EHYGCM+DLL +G EA + + M +E D VIW +LL +C+++ NVELAE +
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQ 492
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++EP+NP+++++LSNIY GRW+DVARI+ + KK+PGCSSIEV+ VV
Sbjct: 493 NLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVV 548
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 180/352 (51%), Gaps = 21/352 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A + A+K+FD+I ++VVSWNAM +GYA+ ++ + LF +M K++ P+
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ VL +C ++ G ++H V +GF +N+ + ALI+LYS +E A +F
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDV 210
+ ++V+ W ++I GY A LF+ DV + + + + G ID+
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315
Query: 211 RNMIEARKLFDQMPK--KDVISWNT-MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I D+ K + S T ++ YA GD+E ++F M +++ SWN +I
Sbjct: 316 GRWIHV--YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY-NGY 326
G+A +G D F RM G + P+D T V +LSAC+ G LD + H++ Y
Sbjct: 374 GFAMHGRADASFDLFSRMRKIG-IEPDDITFVGLLSACSHSGMLDLGR--HIFRSMTQDY 430
Query: 327 QGNVCVGN--ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ + + +ID+ G+ + A ++ N+M+ + D + W +++ MHG
Sbjct: 431 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 139/320 (43%), Gaps = 49/320 (15%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AHS +E + Q+ + V G + + I +I ++ ++ A +F ++ ++V+
Sbjct: 207 AHSGSIELGR---QVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVI 263
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN + GY ++ ++LF +M + PN T VL +C + A+ G +H +
Sbjct: 264 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYI 323
Query: 127 LK--NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
K G + T+LI++Y+ IEAA++VF M +++ W +MI G+ G
Sbjct: 324 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG---R 380
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYAN 240
A F+ LF +M K D I++ +LS ++
Sbjct: 381 ADASFD----------------------------LFSRMRKIGIEPDDITFVGLLSACSH 412
Query: 241 NGDVEECKRLFEEMPER-----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+G ++ + +F M + + + +I ++GLF E + M E P+
Sbjct: 413 SGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME----PDG 468
Query: 296 ATIVTVLSACARLGALDFSK 315
++L AC G ++ ++
Sbjct: 469 VIWCSLLKACKMHGNVELAE 488
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G+ + + +I A+ + A ++F+ + +++ SWNAM G+A + LF
Sbjct: 329 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLF 388
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYST 147
++M+K+ P+ TF +L +C L G + + + +I+L
Sbjct: 389 SRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 448
Query: 148 GKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLFELAPE 194
+ A ++ M+ E + V+W S++ G++ A+ L ++ PE
Sbjct: 449 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPE 500
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/531 (40%), Positives = 322/531 (60%), Gaps = 5/531 (0%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
++QI QV+ + L + ++ P++I A + + + A +F+ + NV +N++ +A
Sbjct: 37 VNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAH 96
Query: 78 NEFHRTVVV-LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N H ++ F QM+K P+ FT+P +LK+C ++L +H V K GF +IF
Sbjct: 97 NTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIF 156
Query: 137 VGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V +LI+ YS ++ A +F M ER+VV W SMI G + CG++ A LF+ PE
Sbjct: 157 VPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPE 216
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
RD++ WNT++ GY M A +LF++MP+++++SW+TM+ GY+ GD++ + LF+
Sbjct: 217 RDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRC 276
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P +NV W +I GYA G E + + +M E + P+D ++++L+ACA G L
Sbjct: 277 PAKNVVLWTTIIAGYAEKGFVREATELYGKM-EEAGLRPDDGFLISILAACAESGMLGLG 335
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAM 373
K +H ++ V NA IDMYAKCG ++ A DVF+ M KD+++WN++I G AM
Sbjct: 336 KRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAM 395
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G AL LF M G PD TF+G+LCACTH GLV EG YF SM Y IVPQ+E
Sbjct: 396 HGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVE 455
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HYGCM+DLL R G L EA ++ MP+E +A+I LL +CR++ +V+ A E+L ++
Sbjct: 456 HYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKV 515
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EP +P N+ +LSNIY G W +VA +++ M +TG +K G SSIEV E V
Sbjct: 516 EPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEV 566
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
LD +H ++ V LI ++ C + +AV+VFN + ++ +N+II
Sbjct: 34 LDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRA 93
Query: 371 LAMHGRGAGALSL--FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
A H +L F +M+ G PD T+ +L ACT G S + M ++
Sbjct: 94 HA-HNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACT-------GPSSLPLVRMIHAH 145
Query: 429 VPQIEHYG------CMVDLLARAGR--LAEAVDFVKRMPIEADAVIWANLLG 472
V + YG ++D +R G L A+ M E D V W +++G
Sbjct: 146 VEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMK-ERDVVTWNSMIG 196
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/572 (39%), Positives = 336/572 (58%), Gaps = 49/572 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
I Q++ +GL ++Y +++ C YA +FD I + N++ WN MF G+A
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ + + L+ M L +P+ +TFP +LKSC K +EG+++H VLK GF +I+V
Sbjct: 67 SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
T+LI +Y+ +E A KVF R+VV +T++I GY+S G I SA+ LF+ P +DV
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQM-------PK--------------------KDVIS 230
+ WN ++SGY++ N EA +LF +M P + V S
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246
Query: 231 W-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
W N ++ Y+ G+VE LF+ + ++V SWN LIGGY + L+ E
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKE 306
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY--AEYNGYQGNVC-VGN 334
L F+ ML G PND T++++L ACA LGA+D +W+HVY + G NV +
Sbjct: 307 ALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT 365
Query: 335 ALIDMYAKCGIIENAVDVFNS-MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LIDMYAKCG I+ A VF+S M + L TWN +ISG AMHGR A +F M+ G
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE 425
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+G+L AC+H G+++ G + F+SM Y I P++EHYGCM+DLL +G EA +
Sbjct: 426 PDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEE 485
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+ MP+E D VIW +LL +C+++ N+EL E ++L ++EP N ++V+LSNIY GR
Sbjct: 486 MINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGR 545
Query: 514 WKDVARIKVAMRDTGF-KKLPGCSSIEVNEVV 544
W +VA+I+ + D G KK+PGCSSIE++ VV
Sbjct: 546 WNEVAKIRALLNDKGMKKKVPGCSSIEIDSVV 577
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 187/410 (45%), Gaps = 55/410 (13%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K QI V+ G + Y+ +I+ AQ ++ ARK+FD + ++VVS+ A+ GY
Sbjct: 106 KEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGY 165
Query: 76 AQNEFHRTVVVLFTQMKKLDAM--------------------------------PNCFTF 103
+ + LF ++ D + P+ T
Sbjct: 166 VSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTM 225
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
V+ +C + +++ G +H + +GF +N+ + ALI+LYS +E A ++F +
Sbjct: 226 VTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWN 285
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDVRNMI 214
++V+ W ++I GY A LF+ DV + + + + G ID+ I
Sbjct: 286 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 345
Query: 215 EARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFE-EMPERNVFSWNGLIGG 268
++ K V++ +++ YA GD++ +++F+ M R++ +WN +I G
Sbjct: 346 H---VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISG 402
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
+A +G D F RM G + P+D T V +LSAC+ G LD + + + GY+
Sbjct: 403 FAMHGRANAAFDIFSRMRMNG-IEPDDITFVGLLSACSHSGMLDLGRNI-FRSMTRGYEI 460
Query: 329 NVCVGN--ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ + +ID+ G+ + A ++ N+M + D + W +++ +HG
Sbjct: 461 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 510
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 151/314 (48%), Gaps = 26/314 (8%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S+ +E +H+H + + G + I +I ++ ++ A ++FD + +++V+
Sbjct: 233 AQSDSIELGRHVH---SWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVI 289
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN + GY ++ ++LF +M + PN T +L +C + A+ G +H +
Sbjct: 290 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 349
Query: 127 LK--NGFRANI-FVGTALIELYSTGKAIEAAYKVF-GEMDERNVVVWTSMINGYISCG-- 180
K G N+ + T+LI++Y+ I+AA +VF M R++ W +MI+G+ G
Sbjct: 350 NKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRA 409
Query: 181 ----DIVSARCLFELAPERDVILWNTIV----SGYIDV-RNMIEA-RKLFDQMPKKDVIS 230
DI S + + P+ D+ + SG +D+ RN+ + + ++ PK +
Sbjct: 410 NAAFDIFSRMRMNGIEPD-DITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLE--H 466
Query: 231 WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
+ M+ ++G +E + + MP E + W L+ +G E+ ++F + L
Sbjct: 467 YGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG-NLELGESFAKKLI-- 523
Query: 290 RVFPNDATIVTVLS 303
++ P ++ +LS
Sbjct: 524 KIEPGNSGSYVLLS 537
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A+ VF+++ +L+ WNT+ G A+ AL L+ M + G +PD TF +L +C
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
+ +EG + I + ++ + A+ GRL +A V + D V +
Sbjct: 102 SKIRKEG-QQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARK-VFDISSHRDVVSYT 159
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
L+ Y + E A + E+ K+ ++ + + Y + G +K+ +
Sbjct: 160 ALIAG---YVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALEL-------- 208
Query: 529 FKKLPGCSSIEVNEVVMLGCLS 550
FK++ +++ +E M+ +S
Sbjct: 209 FKEMMMMTNVRPDESTMVTVVS 230
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 328/530 (61%), Gaps = 5/530 (0%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+ Q+ Q++ L + +I P++I+A + +Q A ++F+++ + NV N++ +A
Sbjct: 34 QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHA 93
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN +F++M++ + FT+P +LK+C + L + +H + K G ++I+
Sbjct: 94 QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 137 VGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V ALI+ YS G + A K+F +M ER+ V W SM+ G + G++ AR LF+ P+
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
RD+I WNT++ GY R M +A +LF++MP+++ +SW+TM+ GY+ GD+E + +F++M
Sbjct: 214 RDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKM 273
Query: 255 P--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P +NV +W +I GYA GL E +M+ G F + A ++++L+AC G L
Sbjct: 274 PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-DAAAVISILAACTESGLLS 332
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+H + + N V NAL+DMYAKCG ++ A DVFN + KDL++WNT++ GL
Sbjct: 333 LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLG 392
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG G A+ LF M+ G PD +TFI +LC+C H GL++EG+ YF SM Y +VPQ+
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGC+VDLL R GRL EA+ V+ MP+E + VIW LLG+CR++ V++A+ L+ L +
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
L+P +P N+ +LSNIY W+ VA I+ M+ G +K G SS+E+ +
Sbjct: 513 LDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELED 562
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L CA L + K +H ++ + LI + C AV VFN + ++
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH---MGLVEEGLSY 418
N++I A + + A +F EM+ G D T+ +L AC+ + +V+ ++
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 419 FQSMAMDYSI-VPQIEHYGCMVDLLARAGRLA--EAVDFVKRMPIEADAVIWANLLG 472
+ + + I VP ++D +R G L +A+ ++M E D V W ++LG
Sbjct: 143 IEKLGLSSDIYVPN-----ALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLG 193
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 334/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I Q++ GL ++Y ++I C + + YA +F I + N++ WN
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PN +TFP VLKSC K A +EG+++H VLK
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G +++V T+LI +Y +E A+KVF + R+VV +T++I GY S G I +A+ LF
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS------------------- 230
+ P +DV+ WN ++SGY + N EA +LF M K +V
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 231 -------W-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
W N ++ Y+ G++E LFE +P ++V SWN LIGGY
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQG 328
+ L+ E L F+ ML G PND T++++L ACA LGA+D +W+HVY + G
Sbjct: 344 HMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ +LIDMYAKCG IE A VFNS+ K L +WN +I G AMHGR + LF M+
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G PD ITF+G+L AC+H G+++ G F++M DY + P++EHYGCM+DLL +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + M +E D VIW +LL +C+++ NVEL E E L ++EP+NP ++V+LSNIY
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW +VA+ + + D G KK+PGCSSIE++ VV
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 326/558 (58%), Gaps = 37/558 (6%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H IQTQ + + ++++ +L + AR++FD++ +NVVSW AM YA
Sbjct: 87 HAHMIQTQFECQDISLGN----KLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYA 142
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
++E + + F +M+ + PN FTF +L +C + L E H ++K GF +N+F
Sbjct: 143 RHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVF 199
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
VG L+++Y+ IE A ++F +M +R+VV W +MI GY+ G I A LF+ P+RD
Sbjct: 200 VGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRD 259
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
VI WNT+++GY ++ A +LF++MP+++++SWNTM++GY NG V+E +LF+ MPE
Sbjct: 260 VITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPE 319
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRM----------LTEG-----------RVF--- 292
RNV SWN +I G+A NG E L FK M + G ++F
Sbjct: 320 RNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQM 379
Query: 293 ------PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
PN T VL ACA L L+ H +G+Q +V VGN L+ MYAKCG I
Sbjct: 380 QMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSI 439
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
E+A VF+ M +D + + +I G A++G +L LF +M+ G PD +TF+G+L AC
Sbjct: 440 EDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSAC 499
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
H GLV+EG YF M Y I P +EHYGCM+DLL RAG EA D + +MPI+ DA +
Sbjct: 500 CHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADM 559
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W +LL +CR + N++L E + L L P+NPA +V+LSNIY GRW D+ ++ M+D
Sbjct: 560 WGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKD 619
Query: 527 TGFKKLPGCSSIEVNEVV 544
KK GCS I + + V
Sbjct: 620 RKVKKKLGCSWIVIKKQV 637
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 156/327 (47%), Gaps = 45/327 (13%)
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRLFEEM 254
+++++ G ++ +++ +A+ L M + +D+ N ++S Y G + E +R+F+EM
Sbjct: 67 YDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM 126
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DF 313
P +NV SW +I YA + E L F M G + PN T ++L AC L L +F
Sbjct: 127 PVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVG-IQPNHFTFASILPACTDLEVLGEF 185
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
H G++ NV VGN L+DMYAK G IE A ++F+ M +D+++WN +I+G
Sbjct: 186 ----HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQ 241
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD-------- 425
+G AL LF E+ D IT+ ++ G VE + F+ M
Sbjct: 242 NGLIEDALKLFQEIPKR----DVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTM 297
Query: 426 ----------------YSIVPQ--IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ I+P+ + + ++ A+ G++ EA+ K MP E + V W
Sbjct: 298 IAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP-ECNVVSW 356
Query: 468 ANLLGSCRVYKNVELAELALERLTELE 494
++ Y AE AL+ +++
Sbjct: 357 NAMIAG---YSQNGQAENALKLFGQMQ 380
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 18/272 (6%)
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
+GL+ G E L + M+ G ++P+ +T ++L C +L +K +H +
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENG-IWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMI 91
Query: 323 YNGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
++ ++ +GN L+ +Y K G + A VF+ M K++++W +I+ A H G AL
Sbjct: 92 QTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEAL 151
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
F+EM++ G P+ TF IL ACT + E L F + + +VD+
Sbjct: 152 GFFYEMQDVGIQPNHFTFASILPACTDL----EVLGEFHDEIVKGGFESNVFVGNGLVDM 207
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
A+ G + A + +MP + D V W ++ Y L E AL+ E+ ++ +
Sbjct: 208 YAKRGCIEFARELFDKMP-QRDVVSWNAMIAG---YVQNGLIEDALKLFQEIPKRDVITW 263
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
+ Y G ++ + F+K+P
Sbjct: 264 NTMMAGYAQCGDVENAVEL--------FEKMP 287
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE H++ V+ SG + + ++ A+ + ARK+FD++ Q+ S +AM
Sbjct: 404 LEQGNEAHEV---VIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAM 460
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
GYA N + + LF QM+ P+ TF VL +C + EG +
Sbjct: 461 IVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQ 510
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/568 (39%), Positives = 323/568 (56%), Gaps = 46/568 (8%)
Query: 22 QTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+V +GL ++Y +++ C + YA +F+ + N++ WN M G A +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + ++ +M +PN +TFP +LKSC K EG ++H V+K G + +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T+LI +Y+ +E A KVF +R+VV T++I GY S GD+ SAR +F+ ERDV+
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS---------------------------- 230
WN +++GY++ EA +LF +M + +V
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 231 ------------WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
N + Y+ GDVE LFE + ++V SWN LIGGY + L+ E
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQGNVCVGNAL 336
L F+ ML G PND T+++VL ACA LGA+D +W+HVY + G + +L
Sbjct: 302 LLLFQEMLRSGES-PNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSL 360
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
IDMYAKCG IE A VFNSM K L +WN +I G AMHGR A LF M+ G PD
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
IT +G+L AC+H GL++ G F+S+ DY+I P++EHYGCM+DLL AG EA + +
Sbjct: 421 ITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIH 480
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
MP+E D VIW +LL +C+++ N+ELAE ++L E+EP+N ++V+LSNIY GRW+D
Sbjct: 481 MMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWED 540
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVNEVV 544
VARI+ + G KK+PGCSSIE++ VV
Sbjct: 541 VARIREVLNGKGMKKVPGCSSIEIDSVV 568
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 180/402 (44%), Gaps = 49/402 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA--- 76
QI QV+ G E Y +I+ A+ ++ ARK+FD + ++VVS A+ GYA
Sbjct: 104 QIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRG 163
Query: 77 ----------------------------QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+N + + LF +M + + P+ T VL
Sbjct: 164 DVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLS 223
Query: 109 SCVKINALREGEELHCLV-LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+C + ++ G E+H LV +GF +++ + A I LYS +E A +F + ++VV
Sbjct: 224 ACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVV 283
Query: 168 VWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDVRNMIEA-- 216
W ++I GY A LF+ DV + + + + G ID+ I
Sbjct: 284 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYI 343
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
K + + +++ YA GD+E ++F M +++ SWN +I G+A +G
Sbjct: 344 DKRLKGVTNGSALR-TSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRAN 402
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV--HVYAEYNGYQGNVCVGN 334
D F RM G + P+D T+V +LSAC+ G LD + + V +YN G
Sbjct: 403 AAFDLFSRMRKNG-IEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYG- 460
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ID+ G+ + A ++ + M + D + W +++ MHG
Sbjct: 461 CMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG 502
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 19/310 (6%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S +E + +H + G S I I ++ + A +F+ ++ ++VV
Sbjct: 226 AQSGSIELGREIHTLVDD--HHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVV 283
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN + GY ++ ++LF +M + PN T VL +C + A+ G +H +
Sbjct: 284 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYI 343
Query: 127 LK--NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
K G + T+LI++Y+ IEAA++VF M +++ W +MI G+ G +
Sbjct: 344 DKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANA 403
Query: 185 ARCLFE------LAPERDVILWNTIV----SGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
A LF + P+ D+ L + SG +D+ I D + + M
Sbjct: 404 AFDLFSRMRKNGIEPD-DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCM 462
Query: 235 LSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+ + G +E + + MP E + W L+ +G E+ ++F + L E + P
Sbjct: 463 IDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG-NLELAESFAQKLME--IEP 519
Query: 294 NDATIVTVLS 303
++ +LS
Sbjct: 520 ENSGSYVLLS 529
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 326/530 (61%), Gaps = 4/530 (0%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWN 69
L + + Q+ + + + +++ R++ + ++ + YAR +FD+I ++++ WN
Sbjct: 23 LCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWN 82
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ Y +N+F +VLF ++ + +P+ FT P V+K C ++ ++EG+++H L LK
Sbjct: 83 TIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKI 141
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +++FV +L+ +YS I+ A KVF M +++VV+W S+I+GY CG+I A LF
Sbjct: 142 GFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLF 201
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
E PERD W +V G + ARKLFDQMP ++++SWN M++GY +GD +
Sbjct: 202 EEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALE 261
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MP ++ +WN +I GY NG F + + F ML G P+ AT+V+VLSA + L
Sbjct: 262 LFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSR-PSHATLVSVLSAVSGLA 320
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L +W+H Y E NG++ + +G +LI+MYAKCG IE+A+ VF ++ K + W II
Sbjct: 321 VLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIV 380
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GL +HG AL+LF EM G P+ I FIG+L AC H GLV++G YF M +Y I
Sbjct: 381 GLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIE 440
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +EHYGC+VD+L RAG L EA + ++ MPI + VIW +LLG R + +++ E A +R
Sbjct: 441 PTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQR 500
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ E+ P+ +++LSN+Y G W+ V+ ++ M GF+K PGCSS+E
Sbjct: 501 VIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVE 550
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/540 (40%), Positives = 315/540 (58%), Gaps = 46/540 (8%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+ YA +F+ I + N++ WN M G+A + + + ++ +M L +PN ++FP +LKS
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C K A EG ++H VLK G + +V T+LI +Y+ +E A KVF R+VV
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK---- 225
T++I GY S GD SAR +F+ ERDV+ WN +++GY++ EA +LF +M +
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 226 ----------------------KDVISW-----------------NTMLSGYANNGDVEE 246
+ V SW N ++ Y+ GDVE
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LFE + ++V SWN LIGGY + L+ E L F+ ML G PND T+++VL ACA
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC-PNDVTLLSVLPACA 312
Query: 307 RLGALDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
LGA+D +W+HVY + G + +LIDMYAKCG IE A VFNSM + L +W
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSW 372
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +I G AMHGR A LF M+ PD ITF+G+L AC+H GL++ G F+SM
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
DY++ P++EHYGCM+DLL +G EA + + MP+E D VIW +LL +C+ + N+ELAE
Sbjct: 433 DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAE 492
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++L ++EP+N ++V+LSNIY GRW+DVAR++ + G KK+PGCSSIEV+ VV
Sbjct: 493 SFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 175/355 (49%), Gaps = 23/355 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A ARK+FD+IT+++VVSWNAM GY +N + + LF +M + + P+
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195
Query: 100 CFTFPIVLKSCVKINALREGEELHCLV----LKNGFRANIFVGTALIELYSTGKAIEAAY 155
T V+ +C + ++ G ++H V +GF +++ + ALI+LYS +E A+
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-----RDVILWNTIVS----G 206
+F + ++VV W ++I GY A LF+ DV L + + + G
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315
Query: 207 YIDVRNMIEARKLFDQMPK---KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
ID+ I D+ K + +++ YA GD+E ++F M R++ SWN
Sbjct: 316 AIDIGRWIHV--YIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV--HVYA 321
+I G+A +G D F RM RV P+D T V +LSAC+ G LD + + +
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRM-RGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+YN G +ID+ G+ + A ++ ++M + D + W +++ HG
Sbjct: 433 DYNLTPKLEHYG-CMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 162/375 (43%), Gaps = 35/375 (9%)
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE----RN 258
+VS + D + A +F+ + + +++ WNTML G+A++ D ++ M N
Sbjct: 6 VVSPHFD--GLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPN 63
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
+S+ L+ A + F E ++L G + +++S AR G L+ ++ V
Sbjct: 64 SYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGL-DRYVHTSLISMYARNGGLEDARKVF 122
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ + +V ALI YA G +A VF+ + +D+++WN +I+G +GR
Sbjct: 123 DASSHR----DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYE 178
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHY 435
AL LF EM PD T + ++ AC G +E G S+ D+ ++
Sbjct: 179 EALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIV 238
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL-- 493
++DL ++ G + A + + + D V W L+G Y + L + AL E+
Sbjct: 239 NALIDLYSKCGDVETAFGLFEGLSCK-DVVSWNTLIGG---YTHTNLYKEALLLFQEMLR 294
Query: 494 EPKNPANFVMLSNIYG-------DLGRWKDV---ARIKVAMRDTGFKK-----LPGCSSI 538
+ P + +LS + D+GRW V ++K +T + C I
Sbjct: 295 SGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDI 354
Query: 539 EVNEVVMLGCLSREL 553
E V L R L
Sbjct: 355 EAAHQVFNSMLYRSL 369
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 39/317 (12%)
Query: 7 AHSEQLETTKHLHQ-IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
A S +E + +H + G S I +I ++ + A +F+ ++ ++V
Sbjct: 207 AQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDV 266
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
VSWN + GY ++ ++LF +M + PN T VL +C + A+ G +H
Sbjct: 267 VSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVY 326
Query: 126 VLK--NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ K G + T+LI++Y+ IEAA++VF M R++ W +MI G+ G
Sbjct: 327 IDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRAN 386
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
+A LF ++ + D I++ +LS +++G
Sbjct: 387 AAFDLFS---------------------------RMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 244 VEECKRLFEEMPER-----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
++ +++F+ M + + + +I ++GLF E + M E P+
Sbjct: 420 LDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPME----PDGVIW 475
Query: 299 VTVLSACARLGALDFSK 315
++L AC + G L+ ++
Sbjct: 476 CSLLKACKKHGNLELAE 492
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/534 (41%), Positives = 310/534 (58%), Gaps = 42/534 (7%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
YA +F I + N + WN M GYA + + + L+ M L +PN +TFP +LKSC
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
K A EG+++H VLK G+ +++V T+LI +Y+ +E A+KVF R+VV +T+
Sbjct: 78 KSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTA 137
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------ 225
+I GY S G+I SA+ +F+ P +DV+ WN ++SGY + + EA +LF +M K
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 226 --------------------KDVISW-------------NTMLSGYANNGDVEECKRLFE 252
+ V SW N ++ Y+ G VE LFE
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ ++V SWN LIGGY + L+ E L F+ ML G PND TIV++L ACA LGA+D
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES-PNDVTIVSILPACAHLGAID 316
Query: 313 FSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+W+HVY + + +LIDMYAKCG IE A VFNSM K L +WN +I G
Sbjct: 317 IGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
AMHGR LF M+ G PD ITF+G+L AC+H G ++ G F+SM DY I P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHYGCM+DLL +G EA + +K MP+E D VIW +LL +CR + N+ELAE L
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++EP+NP ++V+LSNIY G W +VA+++ + G KK+PGCSSIE++ V
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEV 550
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 177/353 (50%), Gaps = 23/353 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A + A++MFD+I ++VVSWNAM +GYA+ ++ + LF +M K + P+
Sbjct: 138 LITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPD 197
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C + ++ G ++H + +GF +N+ + ALI+LYS +E A +F
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDV 210
+ ++VV W ++I GY A LF+ DV + + + + G ID+
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 211 RNMIEA---RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I +KL D + + +++ YA GD+E ++F M +++ SWN +I
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRT--SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA----EY 323
G+A +G D F RM G + P+D T V +LSAC+ G LD + H++ +Y
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNG-IEPDDITFVGLLSACSHSGKLDLGR--HIFKSMTQDY 432
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ G +ID+ G+ + A ++ +M + D + W +++ HG
Sbjct: 433 DITPKLEHYG-CMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 155/360 (43%), Gaps = 33/360 (9%)
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE----RNVFSWNGLIGGYAN 271
A +F + + + + WNTML GYA + D +L+ M N +++ L+ A
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ F E +L G P+ +++S A+ G L+ + V + + +V
Sbjct: 79 SKAFEEGQQIHGHVLKLGYE-PDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR----DVV 133
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
ALI YA G I +A ++F+ + KD+++WN +ISG A G AL LF EM
Sbjct: 134 SYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD T + +L AC VE G S D+ ++ ++DL ++ G++ A
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQ-VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EPKNPANFVMLSNIYG 509
+ + + D V W L+G Y ++ L + AL E+ ++P + ++S +
Sbjct: 253 CGLFEGLSCK-DVVSWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308
Query: 510 -------DLGRW---------KDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
D+GRW KDV ++R + C IE V L + L
Sbjct: 309 CAHLGAIDIGRWIHVYIDKKLKDVTNAP-SLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 40/304 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + G + I +I ++ Q+ A +F+ ++ ++VVSWN + GY
Sbjct: 219 QVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMN 278
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV---LKNGFRANIF 136
++ ++LF +M + PN T +L +C + A+ G +H + LK+ A
Sbjct: 279 LYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPS- 337
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
+ T+LI++Y+ IEAA++VF M +++ W +MI G+ G + LF
Sbjct: 338 LRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMR--- 394
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+N IE D I++ +LS +++G ++ + +F+ M +
Sbjct: 395 --------------KNGIEP----------DDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430
Query: 257 R-----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ + +I ++GLF E + K M E P+ ++L AC R G L
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPME----PDGVIWCSLLKACRRHGNL 486
Query: 312 DFSK 315
+ ++
Sbjct: 487 ELAE 490
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 318/540 (58%), Gaps = 42/540 (7%)
Query: 46 QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPI 105
+ + YA +F+ I + N++ WN MF G+A + + + L+ M L +PN +TFP
Sbjct: 9 HFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPF 68
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+LKSC K+ A +EG ++H VLK G+ +++V T+LI +Y + +E A+KVF R+
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
VV +T+++ GY S G I SAR +F+ P +DV+ WN ++SGY++ N EA +LF +M K
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 226 --------------------------KDVISW-------------NTMLSGYANNGDVEE 246
+ V SW N ++ Y+ G++E
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LF + ++V SWN LIGGY + L+ E L F+ ML G PND T++++L ACA
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGES-PNDVTMLSILHACA 307
Query: 307 RLGALDFSKWVHVYAE--YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
LGA+D +W+HVY + G + +LIDMY+KCG IE A VFNSM K L W
Sbjct: 308 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAW 367
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +I G AMHGR A +F M+ PD ITF+G+L AC+H G+++ G F+SM
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTH 427
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+Y I P++EHYGCM+DLL +G EA + + M +E D VIW +LL +C+++ NVEL E
Sbjct: 428 NYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGE 487
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L ++EP NP ++V+LSNIY GRW +VARI+ + D G KK+PGCSSIE++ VV
Sbjct: 488 KFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVV 547
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 25/354 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T A + AR MFD+I ++VVSWNAM +GY + ++ + LF +M K + P+
Sbjct: 135 LVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPD 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V+ + + ++ G ++H + +GF +N+ + ALI+ YS +E A +F
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDV 210
+ ++V+ W +I GY A LF+ DV + + + + G ID+
Sbjct: 255 GLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI 314
Query: 211 RNMIEARKLFDQMPK--KDVISWNT-MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I D+ K + S T ++ Y+ GD+E ++F M +++ +WN +I
Sbjct: 315 GRWIHV--YIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAE 322
G+A +G D F RM + + P+D T V +LSAC+ G LD F H Y
Sbjct: 373 GFAMHGRANAAFDIFSRM-RKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C +ID+ G+ + A ++ ++M + D + W +++ MHG
Sbjct: 432 TPKLEHYGC----MIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 129/303 (42%), Gaps = 38/303 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + G + I +I ++ +M A +F ++ ++V+SWN + GY
Sbjct: 216 QVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLN 275
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK--NGFRANIFV 137
++ ++LF +M + PN T +L +C + A+ G +H + K G +
Sbjct: 276 LYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 335
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
T+LI++YS IEAA++VF M +++ W +MI G+ G +A +F + ++
Sbjct: 336 RTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEI 395
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
K D I++ +LS ++ G ++ + +F M
Sbjct: 396 ---------------------------KPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428
Query: 258 -----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ + +I ++GLF E + M E P+ ++L AC G ++
Sbjct: 429 YKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTME----PDGVIWCSLLKACKMHGNVE 484
Query: 313 FSK 315
+
Sbjct: 485 LGE 487
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 311/539 (57%), Gaps = 35/539 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNV 65
+E + LHQ ++ SGL S + R+I + + + + YA +F +I + N
Sbjct: 14 AEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNS 73
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN + YA + + +F QM +P+ +TF LKSC + + EG ++H
Sbjct: 74 YMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGH 133
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
VLK G ++F+ LI LY+ SCG I A
Sbjct: 134 VLKTGLGDDLFIQNTLIHLYA-------------------------------SCGCIEDA 162
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
R L + ERDV+ WN ++S Y + M A LFD+M +++V SWN M+SGY G +E
Sbjct: 163 RHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLE 222
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E +R+F E P +NV SWN +I GY++ G F EVL F+ M G V P++ T+V+VLSAC
Sbjct: 223 EARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAG-VKPDNCTLVSVLSAC 281
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A +GAL +WVH Y + NG + V AL+DMY+KCG IE A++VFNS KD+ TWN
Sbjct: 282 AHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWN 341
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+IISGL+ HG G AL +F EM G P+ +TF+ +L AC+ GL++EG F M
Sbjct: 342 SIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHV 401
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ I P IEHYGCMVDLL R G L EA + V++MP + +V+W +LLG+CR + NVELAE
Sbjct: 402 HGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAER 461
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++L EL P+ ++FV LSN+Y +GRWKDV ++ MR G +K PGCS IEV+ V
Sbjct: 462 VAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTV 520
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 328/573 (57%), Gaps = 42/573 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVSWNA 70
++ + QI ++ +GL + + ++I +A ++ ++YA +F+ I + N+ WN+
Sbjct: 40 QSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNS 99
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G + + +V F +M PN +TFP +LKSC K+ + EG+++H VLK G
Sbjct: 100 MIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLG 159
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +++F+ T+LI +Y+ + A VF + + R+ + +T++I GY G + AR LF+
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFD 219
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI--------------------- 229
P +DV+ WN +++GY + EA LF+ M K +V
Sbjct: 220 EMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDL 279
Query: 230 -----SW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
SW N ++ Y+ GD++ + LF++M ER+V SWN +IGGY +
Sbjct: 280 GNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTH 339
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ E L F+ ML G V P + T +++L +CA LGA+D KW+H Y N +
Sbjct: 340 MCSYKEALALFREMLASG-VEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTS 398
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ +LID+YAKCG I A VF+ M K L +WN +I GLAMHG+ A LF +M + G
Sbjct: 399 LSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDG 458
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ ITF+GIL AC H GLV+ G +F SM DY I P+ +HYGCM+DLL RAG EA
Sbjct: 459 IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEA 518
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
++ M ++ D IW +LLG+CR + VEL EL ERL ELEP NP +V+LSNIY
Sbjct: 519 ESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGA 578
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+W DVARI+ + D G KK+PGC++IEV+ VV
Sbjct: 579 GKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVV 611
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 181/350 (51%), Gaps = 42/350 (12%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV--FGEMDER 164
LK K ++R +++H ++K G +F + LIE + ++ + +Y + F ++E
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 165 NVVVWTSMINGYI--------------------------------SCGDIVSAR------ 186
N+ +W SMI G SC + SA
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 187 -CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+ +L DV + ++++ Y M A+ +FDQ +D IS+ +++GYA G ++
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
++LF+EMP ++V SWN +I GYA G E L F+ M + V PN++TIV+VLSAC
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDM-RKANVPPNESTIVSVLSAC 271
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A+ ALD + + E G N+ + NALIDMY+KCG ++ A ++F+ M +D+I+WN
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+I G AL+LF EM +G P ITF+ IL +C H+G ++ G
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/620 (35%), Positives = 351/620 (56%), Gaps = 50/620 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
+Q TK L QI Q++ +GL + R+ITA A + YA+++FD+I N+ +
Sbjct: 43 DQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYT 102
Query: 68 WNAMFNGYAQNE-FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + YA + H+++++ + + P+ FTFP ++K+ ++ L G+ H +V
Sbjct: 103 WNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMV 162
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K +++F+ +LI Y+ + Y+VF + R+VV W SMI ++ G A
Sbjct: 163 IKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEAL 222
Query: 187 CLFE------LAP----------------------------ERDVI-----LWNTIVSGY 207
LF+ + P ER+ I L N ++ Y
Sbjct: 223 ELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMY 282
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ +A++LFD+MP+KD++SW TML GYA G+ + + +F+ MP +++ +WN LI
Sbjct: 283 TKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALIS 342
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
Y G E L+ F + P++ T+V+ LSACA+LGA+D W+HVY + G +
Sbjct: 343 AYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMK 402
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N + +LIDMY KCG ++ A+ VF+S++ KD+ W+ +I+GLAMHG G A++LF +M
Sbjct: 403 LNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKM 462
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ P+ +TF ILCAC+H+GLVEEG ++F M + Y ++P ++HY CMVD+L RAG
Sbjct: 463 QEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGL 522
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EAV+ +++MP+ A +W LLG+C +++NV LAE A +L ELEP N +V+LSNI
Sbjct: 523 LEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNI 582
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV---MLGCLSRELDRKSIVR---- 560
Y G+W V+ ++ MRD G KK PGCSSIEV+ +V ++G S +K +
Sbjct: 583 YAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEI 642
Query: 561 -AEANMIKLLPQNNHPLTFI 579
A I +P +H L +
Sbjct: 643 VARLETIGYVPNKSHLLQLV 662
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/562 (39%), Positives = 318/562 (56%), Gaps = 45/562 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ ++L QI +Q++ +GL + + ++I CA ++YA +F+ I N WN
Sbjct: 43 KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNT 102
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G + + + + +M PN +TFP +LKSC K+ A +EG+++H VLK G
Sbjct: 103 MIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLG 162
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++ FV T+LI +Y+ + A VF + R+ V +T++I GY G + AR LFE
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI--------------------- 229
P RD + WN +++GY EA F +M + +V
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL 282
Query: 230 -----SW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
SW N ++ Y+ GD+++ + LFE + E+++ SWN +IGGY++
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--N 329
+ E L F++M + V PND T V++L ACA LGALD KW+H Y + + G N
Sbjct: 343 MNSYKEALALFRKM-QQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID-KKFLGLTN 400
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ +LIDMYAKCG IE A VF M K L +WN +ISGLAMHG AL LF +M++
Sbjct: 401 TSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRD 460
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G PD ITF+G+L AC+H GLVE G F SM DY I P+++HYGCM+DLL RAG
Sbjct: 461 EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFD 520
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA +K M ++ D IW +LLG+CRV+ NVEL E A + L ELEP+NP +V+LSNIY
Sbjct: 521 EAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYA 580
Query: 510 DLGRWKDVARIKVAMRDTGFKK 531
GRW DVARI+ + D G KK
Sbjct: 581 TAGRWDDVARIRTKLNDKGMKK 602
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/574 (39%), Positives = 318/574 (55%), Gaps = 48/574 (8%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQ--NVVSWNAMFN 73
L QI + ++ SGL + + ++I CA + ++YA +F I Q N+ WN +
Sbjct: 41 LKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIR 100
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
++ + + LF+QM PN TFP + KSC K A E ++LH LK
Sbjct: 101 AHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL 160
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ V T+LI +YS + A VF + R+ V +T++I GY+S G + AR LF+ P
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI------------------------ 229
+DV+ WN +++GY+ EA F +M + DV
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280
Query: 230 --SW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
SW N ++ Y+ G++ ++LF+ M +++V WN +IGGY + L
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN----GYQGNV 330
+ E L F+ ML E V PND T + VL ACA LGALD KWVH Y + N G NV
Sbjct: 341 YEEALVLFEVMLREN-VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNV 399
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ ++I MYAKCG +E A VF SM ++ L +WN +ISGLAM+G AL LF EM N
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINE 459
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD ITF+G+L ACT G VE G YF SM DY I P+++HYGCM+DLLAR+G+ E
Sbjct: 460 GFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDE 519
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A + M +E D IW +LL +CR++ VE E ERL ELEP+N +V+LSNIY
Sbjct: 520 AKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAG 579
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW DVA+I+ + D G KK+PGC+SIE++ VV
Sbjct: 580 AGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVV 613
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 43/320 (13%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
H LE K I + V G K+ + ++ ++ ++ ARK+FD + D++V+
Sbjct: 270 GHLRSLELGK---WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVI 326
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN M GY + +VLF M + + PN TF VL +C + AL G+ +H +
Sbjct: 327 LWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYI 386
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
KN L TG NV +WTS+I Y CG + A
Sbjct: 387 DKN--------------LKGTGNV-------------NNVSLWTSIIVMYAKCGCVEVAE 419
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNG 242
+F R + WN ++SG + A LF++M + D I++ +LS G
Sbjct: 420 QVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAG 479
Query: 243 DVEECKRLFEEMPERNVFS-----WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
VE R F M + S + +I A +G F D K ++ + P+ A
Sbjct: 480 FVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF----DEAKVLMGNMEMEPDGAI 535
Query: 298 IVTVLSACARLGALDFSKWV 317
++L+AC G ++F ++V
Sbjct: 536 WGSLLNACRIHGQVEFGEYV 555
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 328/573 (57%), Gaps = 42/573 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ ++ L QI + + GL R+I C + +M YAR++FD I +
Sbjct: 15 EKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFI 74
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GY++ + V ++ M + P+ FTFP +LK + AL+ G+ L +
Sbjct: 75 WNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAV 134
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF +N+FV A I ++S + ++ A KVF D VV W M++GY ++
Sbjct: 135 KHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKM 194
Query: 188 LF------ELAP---------------------------------ERDVILWNTIVSGYI 208
LF ++P ER++IL N ++ +
Sbjct: 195 LFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFA 254
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
M EA+ +FD M +DVISW ++++G+AN G ++ ++ F+++PER+ SW +I G
Sbjct: 255 ACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDG 314
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y F E L F+ M V P++ T+V++L+ACA LGAL+ +WV Y + N +
Sbjct: 315 YLRMNRFIEALALFREMQMSN-VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKN 373
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ VGNALIDMY KCG + A VF M KD TW +I GLA++G G AL++F M
Sbjct: 374 DTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMI 433
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
A PD IT+IG+LCACTH G+VE+G S+F SM M + I P + HYGCMVDLL RAGRL
Sbjct: 434 EASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRL 493
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + MP++ ++++W +LLG+CRV+KNV+LAE+A +++ ELEP+N A +V+L NIY
Sbjct: 494 EEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIY 553
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW+++ +++ M + G KK PGCS +E+N
Sbjct: 554 AACKRWENLRQVRKLMMERGIKKTPGCSLMELN 586
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 326/530 (61%), Gaps = 5/530 (0%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+ Q+ Q++ L + +I P++I+A + +Q A ++F+++ + NV N++ +A
Sbjct: 34 QVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHA 93
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N +F++M++ + FT+P +LK+C ++ L + +H + K G ++I+
Sbjct: 94 LNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 137 VGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V ALI+ YS G + A K+F +M ER+ V W SM+ G + G++ AR LF+ P+
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQ 213
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
RD+I WNT++ GY R M A +LF++MP+++ +SW+TM+ GY+ GD+E + +F++M
Sbjct: 214 RDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKM 273
Query: 255 P--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P +NV +W +I GYA GL E +M+ G F + A +++L+ACA G L
Sbjct: 274 PFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRF-DAAAAISILAACAESGLLS 332
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
H + + N V NAL+DMYAKCG ++ A DVFN M KDL++WNT++ GL
Sbjct: 333 LGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLG 392
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG G A+ LF M+ G PD +TFI +LC+C H GL++EG+ YF SM Y +VP++
Sbjct: 393 VHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKV 452
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGC+VDLL R GRL EA+ V+ MP+E + VIW LLG+CR++ V++A+ L+ L +
Sbjct: 453 EHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
L+P +P N+ +LSNIY W+ VA I+ M+ G +K G SS+E+ +
Sbjct: 513 LDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELED 562
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L CA L + K +H ++ + LI + C A+ VFN + ++
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNV 82
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
N++I A++ + A +F EM+ G D T+ +L AC+ GLS+
Sbjct: 83 HLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GLSWLPV 135
Query: 422 MAMDYSIVPQIEHYG---------CMVDLLARAGRLA--EAVDFVKRMPIEADAVIWANL 470
+ M ++ IE G ++D +R G L +A+ ++M E D V W ++
Sbjct: 136 VKMMHN---HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSM 191
Query: 471 LG 472
LG
Sbjct: 192 LG 193
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 324/573 (56%), Gaps = 42/573 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E E+ L Q+ Q + GL + + R++T C + YAR++FD+I + N+
Sbjct: 47 ETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFI 106
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GY++ +F + V L+ +M + P+ +TFP + K + AL G +LH VL
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+G + N+FV TAL+++Y ++ A VF + +V+ W +I+ Y G +R
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226
Query: 188 LF------ELAP---------------------------------ERDVILWNTIVSGYI 208
LF ++ P E +++L N ++ Y
Sbjct: 227 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 286
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
D M A +F M +D+ISW T++SG+ N G+++ + F++MPE++ SW +I G
Sbjct: 287 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 346
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y + F E L+ F+ M V P++ T+V+VL+ACA LGAL+ +W+ Y + N +
Sbjct: 347 YIRSNRFKEALELFRNMQATN-VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKN 405
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
++ V NALIDMY KCG ++ A +F M +D TW +I GLA++G G AL +F M
Sbjct: 406 DLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNML 465
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
A +PD IT+IG+L ACTH GLV++G YF M + I P I HYGC+VDLLARAGRL
Sbjct: 466 KASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL 525
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + ++ MPI+A++++W LL CRVY+ ++AE+ ++++ ELEP N A +V+L NIY
Sbjct: 526 KEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIY 585
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW D+ ++ M D G KK PGCS IE+N
Sbjct: 586 AACKRWNDLRELRQMMMDKGIKKXPGCSLIEMN 618
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 324/573 (56%), Gaps = 42/573 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E E+ L Q+ Q + GL + + R++T C + YAR++FD+I + N+
Sbjct: 26 ETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFI 85
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GY++ +F + V L+ +M + P+ +TFP + K + AL G +LH VL
Sbjct: 86 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+G + N+FV TAL+++Y ++ A VF + +V+ W +I+ Y G +R
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205
Query: 188 LF------ELAP---------------------------------ERDVILWNTIVSGYI 208
LF ++ P E +++L N ++ Y
Sbjct: 206 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
D M A +F M +D+ISW T++SG+ N G+++ + F++MPE++ SW +I G
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y + F E L+ F+ M V P++ T+V+VL+ACA LGAL+ +W+ Y + N +
Sbjct: 326 YIRSNRFKEALELFRNMQATN-VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKN 384
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
++ V NALIDMY KCG ++ A +F M +D TW +I GLA++G G AL +F M
Sbjct: 385 DLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNML 444
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
A +PD IT+IG+L ACTH GLV++G YF M + I P I HYGC+VDLLARAGRL
Sbjct: 445 KASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL 504
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + ++ MPI+A++++W LL CRVY+ ++AE+ ++++ ELEP N A +V+L NIY
Sbjct: 505 KEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIY 564
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW D+ ++ M D G KK PGCS IE+N
Sbjct: 565 AACKRWNDLRELRQMMMDKGIKKTPGCSLIEMN 597
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/577 (37%), Positives = 333/577 (57%), Gaps = 43/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ ++ L QIQ+Q+V +GL + + + R+I CA + + + Y + + N S
Sbjct: 14 EKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFS 73
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
WN G+ +E R VVL+ ++ + D P+ +T+P++ K+C +++ +R G E+ V
Sbjct: 74 WNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHV 133
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS-------- 178
L GF ++IFV A+I L + ++ A K+F + R++V W SMINGY+
Sbjct: 134 LHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEAL 193
Query: 179 ------------------CGDIVSARCLFELAPERD-------------VILWNTIVSGY 207
G + S L +L R+ V L N ++ Y
Sbjct: 194 NFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMY 253
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ N+ ARKLFD M K ++SW TM+ GYA +G ++ +LF+EMP+++V WN +IG
Sbjct: 254 MKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIG 313
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY + E L F M + P++ T+V+ LSAC++LGALD W+H Y E +
Sbjct: 314 GYVHANRGKEALALFNEM-QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS 372
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
NV +G ALIDMYAKCG I A+ VF + ++ +TW IISGLA+HG GA++ F EM
Sbjct: 373 LNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEM 432
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ MPD +TF+G+L AC H GLVEEG YF M+ +++ P+++HY CMVDLL RAG
Sbjct: 433 IDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGL 492
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA + +K MPIEADAV+W L +CR++ NV + E A +L +++P + +V+L+N+
Sbjct: 493 LEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANM 552
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
YG+ WK+ + + MR G +K PGCSSIEVN +V
Sbjct: 553 YGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIV 589
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 20/311 (6%)
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
D++ C + N FSWN I G+ ++ E + +KR+L P++ T +
Sbjct: 55 DLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLF 114
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACARL + + + + G+ ++ V NA+I + CG ++ A +F+ +DL+
Sbjct: 115 KACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLV 174
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH---MGLVEEGLSYF 419
+WN++I+G G AL+ + EMK G PD +T IG++ +C + L E Y
Sbjct: 175 SWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYI 234
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ + + VP ++D+ + G L A M V W ++ Y
Sbjct: 235 EENGLKLT-VPLAN---ALMDMYMKCGNLESARKLFDSM-TNKTMVSWTTMVVG---YAQ 286
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
L ++A + E+ K+ + + Y R K+ + M+ +I
Sbjct: 287 SGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAM---------NIN 337
Query: 540 VNEVVMLGCLS 550
+EV M+ CLS
Sbjct: 338 PDEVTMVSCLS 348
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 318/537 (59%), Gaps = 48/537 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E ++ HL QI ++ + +G+ + I +I++ C + M YAR++FD I + +V S
Sbjct: 22 ETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFS 81
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN MF GY++ + V L+ +M + + P+C+T+P + K + AL+ G ELHC V+
Sbjct: 82 WNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVV 141
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G +N+F ALI +YS CG I AR
Sbjct: 142 KYGLDSNVFAHNALINMYSL-------------------------------CGLIDMARG 170
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F+++ + DV+ WN ++SGY + KKDVISW +++G+ N G V+
Sbjct: 171 IFDMSCKSDVVTWNAMISGYNRI--------------KKDVISWTAIVTGFVNTGQVDAA 216
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++ F +MPER+ SW +I GY + E L F+ M T ++ P++ T+V+VL+ACA+
Sbjct: 217 RKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQT-SKIKPDEFTMVSVLTACAQ 275
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGAL+ +W+ Y + N + + VGNALIDMY KCG +E A+ +FN++ +D TW +
Sbjct: 276 LGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAM 335
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+ GLA++G G AL++F +M A PD +T++G+L ACTH G+V+EG +F SM +
Sbjct: 336 VVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHG 395
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P I HYGCMVDLL +AG L EA + +K MP++ ++++W LLG+CR++K+ E+AE A+
Sbjct: 396 IEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAI 455
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E++ ELEP N A +V+ NIY +W + ++ M D G KK PGCS IE+N +V
Sbjct: 456 EQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIV 512
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/532 (38%), Positives = 321/532 (60%), Gaps = 5/532 (0%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRII-TACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+TK +QI TQ++ SGL + R + T C+ + +A +F+ + + + N +
Sbjct: 71 STKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIM 130
Query: 73 NGYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
Y N+ + + + QM + PN +TFP+++K C +I ++ +GE++H +LK GF
Sbjct: 131 RTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGF 190
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++FV +LI +YS I A +F ++V W SMI+GY+ G+I +AR LFE
Sbjct: 191 ELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEE 250
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
PERD+ WN++++GY+ +M A LF++MP +D++SWN M+ GYA ++E LF
Sbjct: 251 MPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELF 310
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP RNV SWN ++ Y + E L F +M+ G PN+AT+V+VL+ACA LG L
Sbjct: 311 NWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMM--GETMPNEATLVSVLTACAHLGRL 368
Query: 312 DFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
D KW+H Y + N + +V + AL+ MYAKCG ++ A DVF+ M + +++WN++I G
Sbjct: 369 DRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMG 428
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
MHG+ AL +F +M+ G MP+ TFI +L AC H G++ EG YF M Y I P
Sbjct: 429 YGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEP 488
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHYGCMVDLL RAG + + + +++MP+E +W LL +CR + N ELAE+ +RL
Sbjct: 489 KVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRL 548
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
ELEP++ +++LSNIY G+W DV ++ M++ G K G S + + E
Sbjct: 549 IELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEE 600
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 324/562 (57%), Gaps = 53/562 (9%)
Query: 33 SDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
+ Y +++ C + YA +F+ I + N + WN MF G+A + + + L+
Sbjct: 5 THYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYV 64
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
M L +PN FTFP +LKSC K +EG+++H VLK GF +++V T+LI +Y+
Sbjct: 65 VMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNG 124
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+E A KVF R+VV +T++I GY S G I SA+ +F+ P +DV+ WN ++SGY +
Sbjct: 125 RLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAE 184
Query: 210 VRNMIEARKLFDQMPK--------------------------KDVISW------------ 231
N +A +LF +M K + V SW
Sbjct: 185 TGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKI 244
Query: 232 -NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
N ++ Y+ G+VE L E + ++V SWN LIGGY + L+ E L F+ ML G
Sbjct: 245 VNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 304
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA------LIDMYAKCG 344
PND T++++L ACA LGA+D +W+HVY + V V NA LIDMYAKCG
Sbjct: 305 T-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCG 361
Query: 345 IIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
I+ A V +S + L TWN +I G AMHGR A +F M+ G PD ITF+G+L
Sbjct: 362 DIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 421
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC+H G+++ G + F+SM DY+I P++EHYGCM+DLL +G EA + + MP+E D
Sbjct: 422 SACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPD 481
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
VIW +LL +C+++ N+EL E ++L ++EP+NP ++V+LSNIY G+W +V +I+
Sbjct: 482 GVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTL 541
Query: 524 MRDTGF-KKLPGCSSIEVNEVV 544
+ D G KK+PGCSSIE++ VV
Sbjct: 542 LNDKGMKKKVPGCSSIEIDSVV 563
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 188/412 (45%), Gaps = 53/412 (12%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T K QI V+ G + Y+ +I+ AQ ++ A+K+FD+ + ++VVS+ A+
Sbjct: 89 KTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALI 148
Query: 73 NGYAQNEF-------------------------------HRTVVVLFTQMKKLDAMPNCF 101
GYA + ++ + LF +M K + P+
Sbjct: 149 TGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDES 208
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T V+ +C + ++ G ++H + +GF +N+ + ALI+LYS +E A ++ +
Sbjct: 209 TMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGL 268
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFEL-----APERDVILWNTIVS----GYIDVRN 212
++V+ W ++I GY A LF+ DV + + + + G ID+
Sbjct: 269 SNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 328
Query: 213 MIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLI 266
I D+ K V++ +++ YA GD++ ++ + R++ +WN +I
Sbjct: 329 WIHV--YIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMI 386
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV--HVYAEYN 324
G+A +G D F RM G + P+D T V +LSAC+ G LD + + + +YN
Sbjct: 387 FGFAMHGRANAAFDIFSRMRKNG-IEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN 445
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
G +ID+ G+ + A ++ N+M + D + W +++ +HG
Sbjct: 446 ITPKLEHYG-CMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/578 (35%), Positives = 327/578 (56%), Gaps = 43/578 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRI--ITACAQLKQMTYARKMFDKITDQNVVS 67
++ + + L Q ++ +G+ Y ++ I A + + YARK+FD+I N +
Sbjct: 39 DRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFT 98
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM--PNCFTFPIVLKSCVKINALREGEELHCL 125
WN + YA + F M ++ PN +TFP ++K+ ++++L G+ LH +
Sbjct: 99 WNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 158
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K+ +++FV +LI Y + +++A KVF + E++VV W SMING++ G A
Sbjct: 159 AIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 218
Query: 186 RCLFELAPERDV---------------------------------------ILWNTIVSG 206
LF+ DV L N ++
Sbjct: 219 LELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDM 278
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
Y ++ +A++LFD M +KD ++W TML GYA + D E + + MP++++ +WN LI
Sbjct: 279 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALI 338
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
Y NG E L F + + + N T+V+ LSACA++GAL+ +W+H Y + NG
Sbjct: 339 SAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGI 398
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+ N V +ALI MY+KCG +E A +VFNS++ +D+ W+ +I GLAMHG G+ A+ +F++
Sbjct: 399 KMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYK 458
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M+ A P+G+TF + CAC+H GLV+E S F M Y IVP+ +HY C+VD+L R+G
Sbjct: 459 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSG 518
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
L +AV F++ MPI +W LLG+C+++ N+ LAE+A RL ELEP+N V+LSN
Sbjct: 519 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSN 578
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
IY G+W +V+ ++ MR TG KK PGCSSIE++ ++
Sbjct: 579 IYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMI 616
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 23/320 (7%)
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT-EGRVFP 293
LS +A+ +E +++F+E+P+ N F+WN LI YA+ + AF M++ E + +P
Sbjct: 75 LSSFAS---LEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
N T ++ A A + +L + +H A + +V V N+LI Y CG +++A VF
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
++ KD+++WN++I+G G AL LF +M++ +T +G+L AC + +E
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 414 EG---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
G SY + ++ ++ M+D+ + G + +A M E D V W +
Sbjct: 252 FGRRVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTM 306
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
L Y E E A E L + K+ + L + Y G+ + + F
Sbjct: 307 LDG---YAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLV--------FH 355
Query: 531 KLPGCSSIEVNEVVMLGCLS 550
+L +I++N++ ++ LS
Sbjct: 356 ELQLQKNIKLNQITLVSTLS 375
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/505 (41%), Positives = 304/505 (60%), Gaps = 9/505 (1%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y PRI + YA +FD I + +VSWN + Y +N+ + LF ++
Sbjct: 57 YADPRI-------NNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-C 108
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D +P+ FT P VLK C ++ AL+EG+++H LVLK GF + FV ++L+ +YS IE
Sbjct: 109 DFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELC 168
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
KVF M++++VV W S+I+GY CG+I A +FE PE+D W ++ G +
Sbjct: 169 RKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLE 228
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
AR +FD+MP ++ +SWN M++GY GD K LF++MPER++ +WN +I GY N
Sbjct: 229 AARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQ 288
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
F + L F+ ML E + PN TI+ +SA + + +L +WVH Y +G++ + +G
Sbjct: 289 FTKALKLFEVMLRED-ISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGT 347
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
LI+MY+KCG +++A+ VF S+ K L W ++I GL MHG L LF EM G P
Sbjct: 348 LLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKP 407
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
ITFIG+L AC+H G E+ YF+ M DY I P IEHYGC++D+L RAG L EA D
Sbjct: 408 HAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDT 467
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++RMPI+A+ VIW +LL R + N+ + E A + L +L P +V+LSN+Y G W
Sbjct: 468 IERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLW 527
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIE 539
+ V +++ M+ G KK PGCSSIE
Sbjct: 528 EKVRQVREMMKKKGMKKDPGCSSIE 552
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 314/537 (58%), Gaps = 32/537 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW--N 69
L H+ ++ QV+ GL + R+++A A L+ + +R++FD I D + ++ N
Sbjct: 362 LPRAAHVRELHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLAN 421
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK--SCVKINALREGEELHCLVL 127
M YA R + F+ M + D+ FT+ ++K S + +R +H V+
Sbjct: 422 TMLRAYALGGAPRDALAAFSAMPRRDS----FTYSFLIKALSAAGVAPVRA---VHSHVV 474
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G + FVG ALI+ YS A KVF EM ER+VV W + + + G++ AR
Sbjct: 475 KLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARK 534
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ PE+D + WNTI+ GY + A +LF +MP+++V+SW+TM+SGY GD+E
Sbjct: 535 LFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMA 594
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F++MP +N+ +W M+ E V + A +V++L+ACA
Sbjct: 595 RVIFDKMPGKNLVTWT--------------------IMMKEASVELDVAAVVSILAACAE 634
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNT 366
G+L K +H Y + V NALIDM+ KCG + A VF++ KD ++WN+
Sbjct: 635 SGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNS 694
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II G AMHG G AL LF +MK G PD +T I +L ACTHMG V+EG YF +M DY
Sbjct: 695 IIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDY 754
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I+PQIEHYGCM+DLL R G + EAVD +K MP E + VIW +LL +CR++KNVE AE+A
Sbjct: 755 GIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIA 814
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ L++L+P N N+ +LSNIY + G+W D+A+ ++ M+ TG +K G S +E+NE
Sbjct: 815 VNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNET 871
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 321/526 (61%), Gaps = 13/526 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
GL +Y+ I+ Y R +F +I N+ WN M G N+ + +
Sbjct: 41 GLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFY 100
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
M+ +PN FTFP VLK+C ++ L+ G ++H LV+K GF ++FV T+L+ LY+
Sbjct: 101 GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC 160
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNT 202
+E A+KVF ++ ++NVV WT++I+GYI G A +F LAP+ I+
Sbjct: 161 GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIV--R 218
Query: 203 IVSGYIDVRNMIEA----RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
++S + ++ + + + ++V +++ YA G++E+ + +F+ MPE++
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 278
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
+ SW +I GYA NGL E +D F +M E V P+ T+V VLSACARLGAL+ +WV
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQMQRE-NVKPDCYTVVGVLSACARLGALELGEWVS 337
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ N + N +G ALID+YAKCG + A +VF M KD + WN IISGLAM+G
Sbjct: 338 GLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVK 397
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
+ LF +++ G PDG TFIG+LC CTH GLV+EG YF SM +S+ P IEHYGCM
Sbjct: 398 ISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCM 457
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
VDLL RAG L EA ++ MP+EA+A++W LLG+CR++++ +LAELAL++L ELEP N
Sbjct: 458 VDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNS 517
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N+V+LSNIY +W + A+++++M + +K PGCS IEV+ +V
Sbjct: 518 GNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIV 563
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/547 (38%), Positives = 326/547 (59%), Gaps = 13/547 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQ----------LKQMTYARKMFD- 58
+Q +T +L QI ++ + LE + + + I C+ L + +AR+MFD
Sbjct: 160 QQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDH 219
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALR 117
+ + N+M Y + L+ +++ + P+ FTF ++ KSC A+
Sbjct: 220 RPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIW 279
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
EG+E+H V+ GF +++ TAL+++Y+ ++ A K+F EM +R+ V WT++I GY+
Sbjct: 280 EGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYV 339
Query: 178 SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
GD+ +A LF+ E+D +NT++ Y+ + +M ARKLFD+MP++ V+SW M+ G
Sbjct: 340 RSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYG 399
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y++NG+++ + LF+ MPE+N+FSWN +I GY N +E L F M + + P++ T
Sbjct: 400 YSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVT 459
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
IV+VL A A LGALD WVH + VG ALIDMYAKCG I + VF++M
Sbjct: 460 IVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMP 519
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K+ +WN +I+ A++GR AL LF EM + G MP+ IT IG+L AC H GLVEEG
Sbjct: 520 EKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKR 579
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+F++M ++ + P+IEHYGCMVDLL RAG L EA ++ MP EA+ +I ++ L +C
Sbjct: 580 WFKAME-EFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYS 638
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
K+V AE L+ ++E N N++ML N+Y + RWK+ +K MR G KK GCS+
Sbjct: 639 KDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSA 698
Query: 538 IEVNEVV 544
IEV+ V
Sbjct: 699 IEVDSRV 705
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/530 (38%), Positives = 329/530 (62%), Gaps = 10/530 (1%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T HLHQ ++ GLE+ +I ++ + +Y+ +F+++ + + +N +
Sbjct: 20 KTIPHLHQFHAHIIHKGLEQDHFIISHFLSISTSV---SYSTSIFNRLLNPSTFLYNILL 76
Query: 73 NGYAQNEFHRTVVVLFTQMKKLD-AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+++N LF +MK+ + A+ + +T+P+++K C L+EGE +H ++ G
Sbjct: 77 KIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGEIVHGSAIRCGV 136
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++VG++LI Y K I +A KVF E+ ERNVV WT+M+ GY S GD+ +A+ +FE
Sbjct: 137 SDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFER 196
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
PER++ WN ++SG ++ ARK+FD+M +++V+S+ M+ GYA GD+ + LF
Sbjct: 197 MPERNLPSWNAMISGLGKAGDLSGARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALF 256
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+E PE++V +W+ LI GY+ N E + F M++ V P++ +V+++SAC++LG
Sbjct: 257 DEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMN-VKPDEFIMVSLMSACSQLGNS 315
Query: 312 DFSKWVHVY---AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
D +KWV Y + Q +V ALIDM+AKCG +E AV +F M ++DLI ++I
Sbjct: 316 DLAKWVDSYLSQTSIDTRQAHVLA--ALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLI 373
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
GL++HGRG A+ LF+ M + G +PD + F IL AC+ GL+E+G +F +M YS+
Sbjct: 374 QGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSV 433
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
VP HY CMVDLL+RAG+L A D +K MP++ A W LLG+C+++ +VEL E
Sbjct: 434 VPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVAN 493
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
RL ELEP+ ++V+LSNIY +W DV+ ++ M++ G +K+PGCS I
Sbjct: 494 RLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/529 (40%), Positives = 309/529 (58%), Gaps = 28/529 (5%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+T L QI Q+ + S + + I++C+ L + YA +F + +N +NA+
Sbjct: 54 STHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIR 113
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G A+N + + F M K P+ TFP VLKS ++ G LHC +LK G
Sbjct: 114 GLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEF 173
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ FV +L+++Y + + +A KVF E E S+ NG
Sbjct: 174 DSFVRVSLVDMYVKVEELGSALKVFDESPE-------SVKNG------------------ 208
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
V++WN ++ GY + ++++A +LFD MPKKD SWN++++G+ GD+ K LF +
Sbjct: 209 --SVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVK 266
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MPE+NV SW ++ G++ NG + L+ F ML EG PND TIV+ LSACA++GALD
Sbjct: 267 MPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEG-ARPNDYTIVSALSACAKIGALDA 325
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+H Y NG++ N+ +G AL+DMYAKCG IE+A VF+ K L+ W+ +I G A+
Sbjct: 326 GLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAI 385
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG AL F MK G PD + F+ +L AC+H G V EGL +F +M Y I P ++
Sbjct: 386 HGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMK 445
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY +VD+L RAGRL EA+ F++ MPI D V+W L +CR +KNVE+AELA ++L +L
Sbjct: 446 HYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQL 505
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
EPK+P ++V LSN Y +GRW D R++V+MRD G K PG S IEV+
Sbjct: 506 EPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDH 554
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 318/534 (59%), Gaps = 12/534 (2%)
Query: 16 KHLHQIQ---TQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW--NA 70
+HLH +Q Q++ GL ++I++ A +++ +R++F + ++ N
Sbjct: 69 QHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNT 128
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ YA N V LF+ M + D+ FT+ ++K+ + + L +H V+K G
Sbjct: 129 LLRAYALNALPHAAVSLFSAMPQRDS----FTYSFLIKA-LSSSGLTPLRAVHSHVVKLG 183
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ +VG ALI+ YS A KVF EM R+ V W S + + G++ SAR +F+
Sbjct: 184 SIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFD 243
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P++D + WNT++ GY M +A +LF MP+++V+SW+T++SGY GD+E + +
Sbjct: 244 EMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVI 303
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F++MP +N+ +W ++ A NGL E F +M E V + A +V++L+ACA G+
Sbjct: 304 FDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQM-KEAAVELDVAAVVSILAACAESGS 362
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLITWNTIIS 369
L K +H Y + V NA+IDM+ KCG + A VF++ + KD ++WNTII
Sbjct: 363 LALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIG 422
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G AMHG G AL F +MK G PD +T I +L ACTHMG VEEG +F +M DY IV
Sbjct: 423 GFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIV 482
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
PQIEHYGCM+DLL R G + EAV +K MP + + VIW +LL +CR++KNVE AE+A+
Sbjct: 483 PQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNE 542
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
L++L+P N N+ +LSNIY + G+W D+A+ ++ M+ TG +K G S IE++E
Sbjct: 543 LSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEA 596
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 327/577 (56%), Gaps = 42/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRI--ITACAQLKQMTYARKMFDKITDQNVVS 67
E+ + + L Q ++ +G Y ++ + A + + YARK+FD+I N +
Sbjct: 38 ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFA 97
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + YA + F M + PN +TFP ++K+ ++++L G+ LH +
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K+ +++FV +LI Y + +++A KVF + E++VV W SMING++ G A
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 187 CLFELAPERDV---------------------------------------ILWNTIVSGY 207
LF+ DV L N ++ Y
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ +A++LFD M +KD ++W TML GYA + D E + + MP++++ +WN LI
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
Y NG E L F + + + N T+V+ LSACA++GAL+ +W+H Y + +G +
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N V +ALI MY+KCG +E + +VFNS++ +D+ W+ +I GLAMHG G A+ +F++M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ A P+G+TF + CAC+H GLV+E S F M +Y IVP+ +HY C+VD+L R+G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L +AV F++ MPI +W LLG+C+++ N+ LAE+A RL ELEP+N V+LSNI
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNI 577
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y LG+W++V+ ++ MR TG KK PGCSSIE++ ++
Sbjct: 578 YAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
LS +A+ +E +++F+E+P+ N F+WN LI YA+ + AF M++E + +PN
Sbjct: 74 LSSFAS---LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T ++ A A + +L + +H A + +V V N+LI Y CG +++A VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
++ KD+++WN++I+G G AL LF +M++ +T +G+L AC + +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 415 G---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G SY + ++ ++ M+D+ + G + +A M E D V W +L
Sbjct: 251 GRQVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 305
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
Y E E A E L + K+ + L + Y G+ + + F +
Sbjct: 306 DG---YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV--------FHE 354
Query: 532 LPGCSSIEVNEVVMLGCLS 550
L ++++N++ ++ LS
Sbjct: 355 LQLQKNMKLNQITLVSTLS 373
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 330/576 (57%), Gaps = 47/576 (8%)
Query: 12 LETTKHLH---QIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMF-------D 58
L +K LH QI ++++T+G + +T RII ++ + + +AR +F
Sbjct: 21 LPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRK 80
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE 118
N WNA+ ++ E R V+F M + + F+F +VLK+C ++ ++E
Sbjct: 81 HRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKE 140
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
G ++H L+ + +++F+ L+ LY + A ++F M +R+ V + SMI+GY+
Sbjct: 141 GMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVK 200
Query: 179 CGDIVSARCLFELAP----------------------------------ERDVILWNTIV 204
G + SAR LF++ P +RD+I WN+++
Sbjct: 201 HGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMI 260
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
G + M A LF+QMPK+DV+SW M+ GYA G+++ + LF+EMPER+V S N
Sbjct: 261 DGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNA 320
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
++ GY NG E L+ F ML+ +FP++AT++ LSA A+LG D +H Y E N
Sbjct: 321 MMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDN 380
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G+ + +G ALIDMYAKCG I+NA+ VF +D K + WN II GLA+HG G A LF
Sbjct: 381 GFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELF 440
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
EM+ PD ITFIG+L AC H GLV+EGL F+ M + + P+++HYGCMVD+L R
Sbjct: 441 MEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGR 500
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG + EA FV++MPIE + V+W LL +CR ++N + E + L ++ NP+++V+L
Sbjct: 501 AGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLL 560
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
SNIY G W DV RI++ M+ KK+PGCS IE+
Sbjct: 561 SNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIEL 596
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/533 (39%), Positives = 324/533 (60%), Gaps = 2/533 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ-MTYARKMFDKITDQNVVSWNAM 71
+T +HL Q+ Q++T ++A + + YA+ +F + + +N++
Sbjct: 107 KTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSL 166
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ ++ + L+ M + P+ T+P V+K+C + + G +H V+K+GF
Sbjct: 167 IRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGF 226
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ ++ ++LI LY+ GK + AA ++F R+VV W +MI+GY+ ++ AR +F+
Sbjct: 227 ECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDR 286
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
RDVI WNT+++GY V + EA++LFD+MP+++++SWN+ML+G+ G+VE+ LF
Sbjct: 287 MVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLF 346
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EMP R+V SWN ++ YA G E L F +M G V P +AT+V++LSACA LGAL
Sbjct: 347 SEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVG-VKPTEATVVSLLSACAHLGAL 405
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D +H Y N + N VG AL+DMYAKCG I A VFN+M++KD++ WNTII+G+
Sbjct: 406 DKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGM 465
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A+HG A LF EMK AG P+ ITF+ IL AC+H G+V+EG M+ Y I P+
Sbjct: 466 AIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPK 525
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGC++DLLARAG L EA++ + MP+E + LLG CR++ N EL E+ +RL
Sbjct: 526 VEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 585
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+P + +++LSNIY +W D +++ M+ G K+PG S IE+ +V
Sbjct: 586 NLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMV 638
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/570 (37%), Positives = 324/570 (56%), Gaps = 42/570 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ L QI +Q + +GL + + +II C +L M YAR +FD + N WN
Sbjct: 30 KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNN 89
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M GY++ + V ++ +M + MP+ +T+P +LK + A++ G ELH ++K G
Sbjct: 90 MIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLG 149
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY-------------- 176
F +N+FV ALI LYS + A VF + +VV W MI+GY
Sbjct: 150 FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFD 209
Query: 177 -----------ISCGDIVSA--------------RCLFELAPERDVILWNTIVSGYIDVR 211
I+ ++SA R + +L E +L N ++ Y
Sbjct: 210 EMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACG 269
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+M A +FD M +DVISW +++G+ N G V + F++MPER+ SW +I GY
Sbjct: 270 DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQ 329
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F EVL F+ M + P++ T+V++L+ACA LGAL+ +W+ Y + N + +
Sbjct: 330 VNRFKEVLSLFREM-QAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSF 388
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VGNALIDMY CG +E A+ +FN+M +D I+W +I GLA++G G AL +F +M A
Sbjct: 389 VGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKAS 448
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD +T IG+LCACTH G+V++G +F M + I P + HYGCMVDLL RAG L EA
Sbjct: 449 ITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEA 508
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+ +K MP++ ++++W +LLG+CRV+++ E+AE+A +++ ELEP+N A +V+L NIY
Sbjct: 509 HEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAAC 568
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW+ + ++ M D G KK PGCS IE+N
Sbjct: 569 NRWEKLHEVRKLMMDRGIKKTPGCSLIEMN 598
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/531 (38%), Positives = 320/531 (60%), Gaps = 15/531 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIIT-ACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
+HL Q+ ++ GLE+ ++ I+ A L ++YA +F ++ + V WN +
Sbjct: 43 EHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASSVFHRVLAPSTVLWNTLIKS 102
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ Q + F +MK A+P+ FT+P V+K+C REG+ LH + G +
Sbjct: 103 HCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQD 162
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
++VGT+LI++Y I A KVF M +RNVV WT+M+ GY++ GD+V AR LF+ P
Sbjct: 163 LYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPH 222
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
R+V WN+++ G++ + ++ AR +FD MP+K+V+S+ TM+ GYA GD+ + LF+
Sbjct: 223 RNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCS 282
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
E++V +W+ LI GY NGL + L F M V P++ +V+++SA A+LG L+ +
Sbjct: 283 LEKDVVAWSALISGYVQNGLPNQALRVFLEMELMN-VKPDEFILVSLMSASAQLGHLELA 341
Query: 315 KWVHVYAEYNGYQGNVCVG-------NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+WV + Y +C+ AL+DM AKCG +E A+ +F+ +D++ + ++
Sbjct: 342 QWV------DSYVSKICIDLQQDHVIAALLDMNAKCGNMERALKLFDEKPRRDVVLYCSM 395
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I GL++HGRG A++LF+ M G PD + F IL AC+ GLV+EG +YFQSM Y
Sbjct: 396 IQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMKQKYC 455
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P +HY CMVDLL+R+G + +A + +K +P E A W LLG+C++Y + EL E+
Sbjct: 456 ISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALLGACKLYGDSELGEIVA 515
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
RL ELEP N AN+V+LS+IY RW DV+ ++ MR+ +K+PG S I
Sbjct: 516 NRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/537 (39%), Positives = 318/537 (59%), Gaps = 13/537 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW--N 69
L HL ++ Q++ GL +++++ A +++ +R +F + + ++ N
Sbjct: 34 LPRLHHLQELHAQLLKHGLHLDPVAASKLLSSYALHRRLPASRGVFASFPNPHATTFLPN 93
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK--SCVKINALREGEELHCLVL 127
+ YA N R V +F+ M D+ FT+ ++K S + LR +H V+
Sbjct: 94 TLLRAYALNALPREAVAVFSAMPHRDS----FTYSFLIKALSSAGVAPLRA---VHSHVV 146
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G + +VG ALI+ YS A KVF EM R+VV W S + + G++ AR
Sbjct: 147 KLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARR 206
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F+ E+D + WNT++ GY ++ EA KLF MP+++V+SW+T++SGY GD+E
Sbjct: 207 MFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMA 266
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F++MP +N+ +W ++ A NGL E F +M E V + A +V++L+ACA
Sbjct: 267 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQM-KEASVELDVAAVVSILAACAE 325
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLITWNT 366
G+L K +H Y + V NALIDM+ KCG I A VF++ + KD ++WNT
Sbjct: 326 SGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNT 385
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II G AMHG G AL F +MK G PD +T I +L ACTHMG VEEG YF +M DY
Sbjct: 386 IIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDY 445
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+VPQIEHYGCM+DLL R G + EAVD +K MP + + VIW +LL +CR++KNVE AE+A
Sbjct: 446 GVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIA 505
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ L++L+P N N+ +LS+IY + G+W D+A+ ++ M+ TG +K G S IE++E
Sbjct: 506 VNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEA 562
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/578 (38%), Positives = 324/578 (56%), Gaps = 47/578 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFD---KITDQN 64
E+ + QI + ++ +GL + ++ ++I CA ++YA +F+ + N
Sbjct: 36 EKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHN 95
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V WN++ GY+ + + + LF++M PN TFP + KSC K A EG++LH
Sbjct: 96 VFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHA 155
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
LK N V T++I +Y++ ++ A VF + R+ V +T++I GY+S G +
Sbjct: 156 HALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDD 215
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI--------------- 229
AR LF+ P +DV+ WN ++SGY+ EA F +M + +V+
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGH 275
Query: 230 -----------SW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
SW N ++ Y G+ + + LF+ + E++V SWN +
Sbjct: 276 TRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTM 335
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN- 324
IGGY+ L+ E L F+ ML V PND T + +L ACA LGALD KWVH Y + N
Sbjct: 336 IGGYSYLSLYEEALALFEVML-RSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL 394
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
N + +LIDMYAKCG IE A VF SM +++L +WN ++SG AMHG AL+LF
Sbjct: 395 RNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALF 454
Query: 385 HEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
EM N G PD ITF+G+L ACT GLV+ G YF+SM DY I P+++HYGCM+DLLA
Sbjct: 455 SEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLA 514
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RA + EA +K M +E D IW +LL +C+ + VE E ERL +LEP+N FV+
Sbjct: 515 RAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVL 574
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LSNIY GRW DVARI+ + D G KK+PGC+SIE++
Sbjct: 575 LSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEID 612
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 144/364 (39%), Gaps = 58/364 (15%)
Query: 241 NGDVEECKRLFEEMPER---NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
+GD+ LFEE + NVF WN LI GY+ + L F RML G V PN T
Sbjct: 75 SGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG-VQPNSHT 133
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC-------------- 343
+ +C + A K +H +A N V ++I MYA
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193
Query: 344 -----------------GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
G +++A +F+ + KD+++WN +ISG GR A+ F+E
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M+ A +P+ T + +L AC H E G + S D ++ ++D+ + G
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELG-KWIGSWVRDNGFGSNLQLTNALIDMYCKCG 312
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN--PANFVML 504
A + + E D + W ++G Y + L E AL + N P + L
Sbjct: 313 ETDIARELFDGIE-EKDVISWNTMIGG---YSYLSLYEEALALFEVMLRSNVKPNDVTFL 368
Query: 505 SNIYG-------DLGRWKDVARIKVAMRDTGFKKL--------PGCSSIEVNEVVMLGCL 549
++ DLG+W A I +R++ L C IE E V
Sbjct: 369 GILHACACLGALDLGKWVH-AYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH 427
Query: 550 SREL 553
SR L
Sbjct: 428 SRNL 431
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 321/544 (59%), Gaps = 62/544 (11%)
Query: 3 DTTGAHSEQLE---TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK 59
DTT + S L+ TT L Q+ +++ GL + +I + +T C L +Y +F+
Sbjct: 71 DTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNG 130
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
++ + V WN GY++N V LF +MK+ DA+P+ FT+P ++K+C K+ ++EG
Sbjct: 131 VSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEG 190
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
H ++ G ++FV T+LI+LY GK C
Sbjct: 191 VAFHGSAVRCGVGGDVFVMTSLIDLY--GK-----------------------------C 219
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G+I+ AR +F+ ER+V+ W +++GY +++EARKLFD+MP+K+ +SWN ++SGY
Sbjct: 220 GEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYV 279
Query: 240 NNGDVEECKRLFEEMPERN--VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
GD+ +++F+EMP RN V +W+ LI G V P++
Sbjct: 280 KCGDLRSARKMFDEMPHRNRDVVAWSALI---------------------SGNVKPDEFI 318
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNG---YQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+V+++SAC+++G+L+ +KWV Y + ++ +V ALIDM AKCG ++ A +F
Sbjct: 319 MVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIA--ALIDMNAKCGSMDRATKLFE 376
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M +DLI++ +++ GL++HG G A+SLF M N G PD + F IL AC+ GLV+E
Sbjct: 377 EMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 436
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G YF+SM DYSIVP +HY CMVDLL RAGRL EA + +K MP+E A W LLG+C
Sbjct: 437 GCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGAC 496
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
+++ ++EL E+ ++L ELEP+N N+V+LSNIY +W DV+ ++ MR+ G +K+PG
Sbjct: 497 KLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPG 556
Query: 535 CSSI 538
CS I
Sbjct: 557 CSWI 560
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 5/211 (2%)
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F L R F ++I T+L AC L+ VH G + + + + +
Sbjct: 60 FPDYLPTLRSFDTTSSISTLLKACTTTSTLE---QVHARIIRKGLHQDHFIISQFLTLCN 116
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
VFN + + + WNT I G + + + +SLF MK + +PD T+
Sbjct: 117 SLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPS 176
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
++ AC+ + V+EG++ F A+ + + ++DL + G + A M E
Sbjct: 177 LIKACSKVCGVKEGVA-FHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMG-E 234
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTE 492
+ V W ++ + ++ A + + E
Sbjct: 235 RNVVSWTAMIAGYASFSDLVEARKLFDEMPE 265
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/533 (39%), Positives = 316/533 (59%), Gaps = 6/533 (1%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H+ QI Q++ L + YI P++I + + ++ A +F+++ D NV +N + Y+
Sbjct: 37 HIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYS 96
Query: 77 QNEFHRTVVVLFTQMKKLDA---MPNCFTFPIVLKSCVKINA-LREGEELHCLVLKNGFR 132
+ + F + K+ + + FT+P +LK C ++ L + +H V K GF
Sbjct: 97 LSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFY 156
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+IFV +LI+ Y +E A KVF M+ER+VV W SM+ G + GD+ A +F+
Sbjct: 157 WDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEM 216
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
PERD + WNT++ G+ M +A KLF++M ++D++SW+TM+ GY+ NGD++ + LF+
Sbjct: 217 PERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFD 276
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P +N+ W +I GYA G E ++ M G +D +++L+ACA G L
Sbjct: 277 RCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRL-DDGFFISILAACAESGMLG 335
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGL 371
K +H + ++ + V N+ IDMYAKCG +++A VFN M T KDL++WN++I G
Sbjct: 336 LGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGF 395
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+HG G ++ LF+ M G PD TFIG+LCACTH GLV EG YF SM Y IVPQ
Sbjct: 396 GIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQ 455
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGCMVDLL R G L EA V+ MP E +A+I LLG+CR++ +V+LA + L
Sbjct: 456 IEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLF 515
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L P +P NF +LSNIY G W +VA+++ M D G +K G SSIEV E V
Sbjct: 516 KLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEV 568
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 322/575 (56%), Gaps = 44/575 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
++ ++K L ++ +++ +GL + ++ TA A + YAR +FD+I N+ +
Sbjct: 33 DKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYT 92
Query: 68 WNAMFNGYAQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + YA + + ++ V+ + K + +PN FTFP V+K+ ++ A R G +H +
Sbjct: 93 WNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMA 152
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K F ++++ +L+ Y + A ++F + ++VV W SMI+ + A
Sbjct: 153 IKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDAL 212
Query: 187 CLFELAPER----------------------------------------DVILWNTIVSG 206
LF L ER D+ L N ++
Sbjct: 213 ELF-LKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDM 271
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
Y ++ +A+KLFD+MP++DV SW ML GYA GD + + +F MP + + +WN LI
Sbjct: 272 YTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLI 331
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
Y NG E L F + P++ T+V+ LSACA+LGA+D W+HVY + G
Sbjct: 332 SAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGI 391
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
N + ++L+DMYAKCG +E A++VF S++ +D+ W+ +I+GL MHGRG A+ LF E
Sbjct: 392 VLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFE 451
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M+ A P+ +TF +LCAC+H GLV+EG +F M Y +VP+++HY CMVD+L RAG
Sbjct: 452 MQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAG 511
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
L EA++ + M A +W LLG+C ++ NVEL ELA ++L +LEP+N V+LSN
Sbjct: 512 FLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSN 571
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
IY GRW+ V+ ++ MRDT KK PGCSSIE N
Sbjct: 572 IYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEAN 606
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + G+ + ++ ++ A+ + A ++F + +++V W+AM G +
Sbjct: 382 IHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGR 441
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVGT 139
+ + LF +M++ PN TF VL +C + EG H + G +
Sbjct: 442 GKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYA 501
Query: 140 ALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMING-----YISCGDIVSARCLFELAP 193
++++ +E A ++ EM + VW +++ + G++ S + L +L P
Sbjct: 502 CMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQ-LLKLEP 560
Query: 194 ERD--VILWNTIVSGYIDVRNMIEARKLF-DQMPKKDVISWNTMLSGYANNGDVEE 246
++L + I + + E RKL D KK+ S NG+V E
Sbjct: 561 RNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKE-----PGCSSIEANGNVHE 611
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/580 (36%), Positives = 329/580 (56%), Gaps = 46/580 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVS 67
E T ++QI +Q + +GL + ++I C + + YARK+FD+I +V
Sbjct: 43 ETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFI 102
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GY++ + V L+ M + P+ FTFP +LK K AL+ G+ L +
Sbjct: 103 WNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAV 162
Query: 128 KNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---------- 176
+GF +N+FV I L+S + A K+F D VV W +++GY
Sbjct: 163 IHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESK 222
Query: 177 ------------------------ISCG---DIVSARCLF-----ELAPERDVILWNTIV 204
+C D+V +C++ E E ++IL N ++
Sbjct: 223 RLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALI 282
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+ M AR +FD+M +DVISW ++++G+AN ++ ++ F++MPER+ SW
Sbjct: 283 DMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTA 342
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GY F EVL F+ M V P++ T+V++L+ACA LGAL+ +W Y + N
Sbjct: 343 MIDGYLRMNRFKEVLTLFRDM-QMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKN 401
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ + +GNALIDMY KCG +E A +FN M KD TW +I GLA +G G AL++F
Sbjct: 402 KIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMF 461
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
M A PD IT+IG++CACTH+GLV +G +F +MA+ + I P + HYGCMVDLL R
Sbjct: 462 SYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGR 521
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG L EA++ + MP++ ++++W +LLG+CRV+KNV+LAE+A + ELEP+N A +V+L
Sbjct: 522 AGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLL 581
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
NIY +WK++ ++ M + G KK+PGCS +E+N +V
Sbjct: 582 CNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIV 621
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/532 (38%), Positives = 318/532 (59%), Gaps = 13/532 (2%)
Query: 25 VVTSGLEKSDYITPRIITACAQ----------LKQMTYARKMFD-KITDQNVVSWNAMFN 73
++ + LE + + + I C+ L + +AR+MFD + + N+M
Sbjct: 1 MLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIK 60
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y + L+ +++ + P+ FTF ++ KSC A+ EG+E+H V+ GF
Sbjct: 61 AYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFC 120
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++ TAL+++Y+ ++ A K+F EM +R+ V WT++I GY+ GD+ +A LF+
Sbjct: 121 LDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQM 180
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
E+D +NT++ Y+ + +M ARKLFD+MP++ V+SW M+ GY++NG+++ + LF+
Sbjct: 181 IEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFD 240
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
MPE+N+FSWN +I GY N +E L F M + + P++ TIV+VL A A LGALD
Sbjct: 241 AMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALD 300
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
WVH + VG ALIDMYAKCG I + VF++M K+ +WN +I+ A
Sbjct: 301 LGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFA 360
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
++GR AL LF EM + G MP+ IT IG+L AC H GLVEEG +F++M ++ + P+I
Sbjct: 361 INGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAME-EFGLTPKI 419
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCMVDLL RAG L EA ++ MP EA+ +I ++ L +C K+V AE L+ +
Sbjct: 420 EHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIK 479
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+E N N++ML N+Y + RWK+ +K MR G KK GCS+IEV+ V
Sbjct: 480 MEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRV 531
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 163/379 (43%), Gaps = 82/379 (21%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+I + VV G Y ++ A+ +M ARK+FD++ D++ VSW A+ GY ++
Sbjct: 108 QEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRS 167
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
LF QM + D+ F ++ + VK+ + C
Sbjct: 168 GDMDNAGKLFDQMIEKDSA----AFNTMIDAYVKLGDM-------C-------------- 202
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+A K+F EM ER+VV WT MI GY S G++ SAR LF+ PE+++
Sbjct: 203 --------------SARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLF 248
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK-----------------------DVISW---- 231
WN ++SGY + EA KLF +M D+ W
Sbjct: 249 SWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRF 308
Query: 232 -------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
++ YA G++ + + +F+ MPE+ SWN LI +A NG E
Sbjct: 309 VRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEA 368
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGYQGNVCVGNALI 337
L F M +G PN+ T++ VLSAC G ++ K W E+ G + ++
Sbjct: 369 LGLFMEMNHKG-FMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEF-GLTPKIEHYGCMV 426
Query: 338 DMYAKCGIIENAVDVFNSM 356
D+ + G ++ A + SM
Sbjct: 427 DLLGRAGCLQEAEKLMESM 445
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 314/532 (59%), Gaps = 37/532 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ ++ L QIQ+Q+V +GL + + + R+I CA + + + Y + + N S
Sbjct: 58 EKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFS 117
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
WN G+ +E R VVL+ ++ + D P+ +T+P++ K+C +++ +R G E+ V
Sbjct: 118 WNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHV 177
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
L GF ++IFV A+I L +SCGD+ AR
Sbjct: 178 LHLGFDSDIFVSNAVIHLL-------------------------------VSCGDLDGAR 206
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+F+ + RD++ WN++++GY N+ ARKLFD M K ++SW TM+ GYA +G ++
Sbjct: 207 KMFDKSCVRDLVSWNSMINGYCG--NLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDM 264
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+LF+EMP+++V WN +IGGY + E L F M + P++ T+V+ LSAC+
Sbjct: 265 AWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM-QAMNINPDEVTMVSCLSACS 323
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+LGALD W+H Y E + NV +G ALIDMYAKCG I A+ VF + ++ +TW
Sbjct: 324 QLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTA 383
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
IISGLA+HG GA++ F EM + MPD +TF+G+L AC H GLVEEG YF M+ +
Sbjct: 384 IISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKF 443
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
++ P+++HY CMVDLL RAG L EA + +K MPIEADAV+W L +CR++ NV + E A
Sbjct: 444 NLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERA 503
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+L +++P + +V+L+N+YG+ WK+ + + MR G +K P S+
Sbjct: 504 ASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPDSWSL 555
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 41/315 (13%)
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
D++ C + N FSWN I G+ ++ E + +KR+L P++ T +
Sbjct: 99 DLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLF 158
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACARL + + + + G+ ++ V NA+I + CG ++ A +F+ +DL+
Sbjct: 159 KACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLV 218
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN++I+G G A LF M N +++ ++ GL++ F M
Sbjct: 219 SWNSMINGYC--GNLESARKLFDSMTNKTM----VSWTTMVVGYAQSGLLDMAWKLFDEM 272
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF---VKRMPIEADAVIWANLLGSCR---- 475
D +VP + M+ A R EA+ ++ M I D V + L +C
Sbjct: 273 P-DKDVVP----WNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGA 327
Query: 476 ------VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
++ +E EL+L N A L ++Y G+ ++ F
Sbjct: 328 LDVGIWIHHYIEKHELSL---------NVALGTALIDMYAKCGKITKAIQV--------F 370
Query: 530 KKLPGCSSIEVNEVV 544
++LPG +S+ ++
Sbjct: 371 QELPGRNSLTWTAII 385
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 313/531 (58%), Gaps = 36/531 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T LHQI Q+ L + + ++I++ LK + YA +F N+ +NA+
Sbjct: 52 TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIR 111
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G A+N V F M +L P+ T P VLKS + + G LH V+K G
Sbjct: 112 GLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEF 171
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ FV +L+++Y + G++ LF+ +P
Sbjct: 172 DSFVRVSLVDMY-------------------------------VKIGELGFGLQLFDESP 200
Query: 194 ERD----VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+R+ ++LWN +++G V ++ +A LF+ MP+++ SWN++++G+ NGD++ +
Sbjct: 201 QRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARE 260
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MPE+NV SW +I G++ NG + L F RML EG V PND T+V+ L AC ++G
Sbjct: 261 LFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEG-VRPNDLTVVSALLACTKIG 319
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + +H Y NG+Q N +G AL+DMYAKCG I++A VF KDL+TW+ +I
Sbjct: 320 ALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIW 379
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A+HG AL F +MK+AG PD + F+ IL AC+H G V++GL++F+SM +DYSI
Sbjct: 380 GWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIE 439
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY +VDLL RAGRL EA+ F++ MPI D VIW L +CR +KN+E+AEL E+
Sbjct: 440 PTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEK 499
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L +LEPK+P ++V LSN+Y +GRW+DV R++ M++ G +K PG S IEV
Sbjct: 500 LLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEV 550
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 324/546 (59%), Gaps = 15/546 (2%)
Query: 13 ETTKHLHQIQTQVVTS--GLEKSDYITPRIITACAQLKQM--TYARKMFDKITDQNVVSW 68
++ K L QI ++ + + I+ R+ CAQ + YA + ++ N+ +
Sbjct: 33 KSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLY 92
Query: 69 NAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
NA+ G A N +V++ QM +P+ +T P VLK+C + A+REGEE+H +
Sbjct: 93 NAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAI 152
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G ++++V L+ +Y+ I +A KVF +R++V WT+MI GY+ G
Sbjct: 153 KMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVG 212
Query: 188 LF-ELAPER---DVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGY 238
LF E+ E D + ++S + ++ RKL + + DV N ++ Y
Sbjct: 213 LFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMY 272
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
GD +++F+EMP +NV SWN +I G A G F E L F++M G V P+D T+
Sbjct: 273 LKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG-VKPDDVTL 331
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V VL++CA LG L+ KWVH Y + N + + +GNAL+DMYAKCG I+ A VF +M+
Sbjct: 332 VAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR 391
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
KD+ ++ +I GLAMHG+G AL LF EM G PD +TF+G+L AC+H+GLVEEG Y
Sbjct: 392 KDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKY 451
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+ M+ Y++ PQ+EHYGCMVDLL RAG + EA +F++ MPIE DA + LLG+C+++
Sbjct: 452 FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHG 511
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
VEL E ++++ ++EP+ +V++SNIY RW+D +++ M++ +K PGCSSI
Sbjct: 512 KVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 571
Query: 539 EVNEVV 544
E++ V+
Sbjct: 572 ELDGVI 577
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/511 (38%), Positives = 311/511 (60%), Gaps = 33/511 (6%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y+ + I+A + +M YA + ++ NV +NAM G+ Q+ + L+ QM +
Sbjct: 15 YLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRA 74
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ P +TFP ++K+C ++ LR E +H V +NGF +++FV T+L++ YS+ IE +
Sbjct: 75 NVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEES 134
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
+VF EM ER+V WT+M++G + GD+ SA LF++ P+R++ WNT++ GY +R +
Sbjct: 135 VRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVD 194
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A LF+QMP +D+ISW TM++ Y+ N KR
Sbjct: 195 VAELLFNQMPARDIISWTTMINCYSQN------KR------------------------- 223
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
F E L F M G + P++ T+ TV+SACA LGALD K +H Y +G+ +V +G+
Sbjct: 224 FREALGVFNEMAKHG-ISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGS 282
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALIDMYAKCG ++ ++ +F + K+L WN++I GLA+HG AL++F +M+ P
Sbjct: 283 ALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKP 342
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
+G+TF+ +L AC H GL+EEG F SM D+SI P +EHYGCMVDLL++AG L EA+
Sbjct: 343 NGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQL 402
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ M +E +AVIW LL C++++N+E+A++A +L LEP N + +L N+ ++ RW
Sbjct: 403 IRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRW 462
Query: 515 KDVARIKVAMRDTGF-KKLPGCSSIEVNEVV 544
+ A+I++ M++ G K+ PG S IE+ V
Sbjct: 463 GEAAKIRLTMKEQGVEKRCPGSSWIEMESQV 493
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 130/321 (40%), Gaps = 74/321 (23%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM--------- 71
+ V +G + ++ ++ + + ++ + ++FD++ +++V +W M
Sbjct: 102 VHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGD 161
Query: 72 ----------------------FNGYAQNEFHRTVVVLFTQMKKLD-----AMPNCF--- 101
+GYA+ +LF QM D M NC+
Sbjct: 162 MSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQN 221
Query: 102 -----------------------TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
T V+ +C + AL G+E+H ++++GF ++++G
Sbjct: 222 KRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIG 281
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+ALI++Y+ +++ + +F ++ E+N+ W S+I G G A +F+ ER+ I
Sbjct: 282 SALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFD-KMEREKI 340
Query: 199 LWN-----TIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECK 248
N +++S + E RK F M + I + M+ + G +EE
Sbjct: 341 KPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEAL 400
Query: 249 RLFEEMP-ERNVFSWNGLIGG 268
+L M E N W L+ G
Sbjct: 401 QLIRTMKLEPNAVIWGALLSG 421
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH L+ K +H ++ G YI +I A+ + + MF K+ ++N+
Sbjct: 254 AHLGALDLGKEIHYY---IMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLF 310
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
WN++ G A + + + +F +M++ PN TF VL +C + EG + +
Sbjct: 311 CWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASM 370
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ + +++L S +E A ++ M E N V+W ++++G
Sbjct: 371 TRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG 421
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 305/529 (57%), Gaps = 35/529 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITAC--AQLKQMTYARKMFDKITDQNVVSWNAM 71
T L QI ++ G + +I A A M YA ++F IT+ + WN M
Sbjct: 25 TIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTM 84
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
G AQ+ + L++QM+ P+ FTFP VLK+C ++ ++ G +H V + GF
Sbjct: 85 IRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGF 144
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+N FV LI ++ +CGD+ AR LF+
Sbjct: 145 ESNTFVRNTLIYFHA-------------------------------NCGDLAVARALFDG 173
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
+ +RDV+ W+ + +GY + AR+LFD+MP KD++SWN M++GYA G++E ++LF
Sbjct: 174 SAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLF 233
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+E+P+R+V +WN +I GY G + L+ F+ M + G + P++ T++++LSAC LG L
Sbjct: 234 DEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL-PDEVTMLSLLSACTDLGDL 292
Query: 312 DFSKWVHVYAEYNGYQG-NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
D + +H G++ +V +GNALIDMYAKCG I A++VF M KD+ TWN+++ G
Sbjct: 293 DAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGG 352
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LA HG ++ LF EM+ PD ITF+G+L AC+H G VEEG YF M +Y+I P
Sbjct: 353 LAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEP 412
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
I HYGCMVDLL RAG L EA DF+ M IE +A++W LLG+CR++ NVEL A +L
Sbjct: 413 NIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQL 472
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++ ++V+LSNIY G W V +++ M D+G +K GCS IE
Sbjct: 473 LKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 521
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 76/207 (36%), Gaps = 36/207 (17%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI--DMYAKCGIIENAV 350
P+ + +C +G L K +H G+ N LI A G + A
Sbjct: 11 PSRQQRSQLWRSCTTIGTL---KQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAH 67
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
+F + D WNT+I G A A+SL+ +M+N PD TF +L ACT +
Sbjct: 68 QLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLC 127
Query: 411 LVEEG---------------------LSYFQSMAMDYSIVPQIEHYGCMVDLL------- 442
V+ G L YF + D ++ + D++
Sbjct: 128 WVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTA 187
Query: 443 --ARAGRLAEAVDFVKRMPIEADAVIW 467
AR G L A MP++ D V W
Sbjct: 188 GYARRGELGVARQLFDEMPVK-DLVSW 213
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/535 (38%), Positives = 311/535 (58%), Gaps = 38/535 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+I+ C + + + AR +FD++ +++VVSWNAM +GYAQN + + +F D MP
Sbjct: 117 MISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF------DEMPC 170
Query: 99 -NCFTFPIVLKSCVKINALREGEEL------------HCL----VLKNGF---------- 131
N ++ +L + V+ + + L +C+ V +N
Sbjct: 171 KNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM 230
Query: 132 --RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
R + T + G+ +EA ++F E R+V WT+M++GY+ G + AR +F
Sbjct: 231 PERDEVSWNTMISGYAQNGELLEAQ-RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF 289
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PE++ + WN I++GY+ + M +AR+LF+ MP ++V SWNTM++GYA NGD+ + +
Sbjct: 290 DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARN 349
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
F+ MP+R+ SW +I GYA +G E L F M +G N +T + LS CA +
Sbjct: 350 FFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL-NRSTFTSTLSTCAEIA 408
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL+ K VH G + VGNAL+ MY KCG I++A VF ++ K++++WNT+I+
Sbjct: 409 ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIA 468
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A HG G AL LF MK G +PD +T +G+L AC+H GLV++G YF SM DY I
Sbjct: 469 GYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGIT 528
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+HY CM+DLL RAGRL +A + +K MP E DA W LLG+ R++ N EL E A +
Sbjct: 529 ANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKM 588
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ E+EP N +V+LSN+Y GRW DV R+++ MRD G KK+PG S +EV +
Sbjct: 589 IFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 643
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 199/395 (50%), Gaps = 18/395 (4%)
Query: 22 QTQVVTSGLEKSDYITPRI-ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
Q + +S +D + I IT + Q A ++F+ + ++ +SWNAM +G N+
Sbjct: 36 QPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDK 95
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
LF +M D + ++ +++ CV+ LR L+ ++ A
Sbjct: 96 FYLARQLFEKMPTRDLV----SWNVMISGCVRYRNLRAAR----LLFDQMPERDVVSWNA 147
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
++ Y+ ++ A ++F EM +N + W M+ Y+ G I AR LFE + ++I W
Sbjct: 148 MLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISW 207
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++ GY+ +++AR +FD+MP++D +SWNTM+SGYA NG++ E +RLFEE P R+VF
Sbjct: 208 NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVF 267
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W ++ GY NG+ E F M + V N I+ C R +D ++ +
Sbjct: 268 TWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWN--AIIAGYVQCKR---MDQARELFEA 322
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
NV N +I YA+ G I A + F+ M +D I+W II+G A G G A
Sbjct: 323 MPCQ----NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 378
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
L LF EMK GE + TF L C + +E G
Sbjct: 379 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 171/344 (49%), Gaps = 24/344 (6%)
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
++A ++F M R+ + W +MI+G +S AR LFE P RD++ WN ++SG + R
Sbjct: 66 DSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYR 125
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
N+ AR LFDQMP++DV+SWN MLSGYA NG V+E K +F+EMP +N SWNG++ Y
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQ 185
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY-QGNV 330
NG R+ R+F + A + C G + ++ V ++ + +
Sbjct: 186 NG----------RIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 235
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N +I YA+ G + A +F +D+ TW ++SG +G A +F M
Sbjct: 236 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE- 294
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
+ +++ I+ +++ F++M + + M+ A+ G +A+
Sbjct: 295 ---KNSVSWNAIIAGYVQCKRMDQARELFEAMP-----CQNVSSWNTMITGYAQNGDIAQ 346
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
A +F RMP + D++ WA ++ Y E AL E++
Sbjct: 347 ARNFFDRMP-QRDSISWAAIIAG---YAQSGYGEEALHLFVEMK 386
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 44/314 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN------------ 78
EK+ II Q K+M AR++F+ + QNV SWN M GYAQN
Sbjct: 294 EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDR 353
Query: 79 -------------------EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + LF +MK+ N TF L +C +I AL G
Sbjct: 354 MPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++H V+K G + +VG AL+ +Y I+ AY VF ++E+ VV W +MI GY
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARH 473
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI----EARKLFDQMPKKDVISWNT-- 233
G A LFE + ++ + + G + + + + F M + I+ N+
Sbjct: 474 GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKH 533
Query: 234 ---MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
M+ G +++ + L + MP E + +W L+G +G E+ + +M+ E
Sbjct: 534 YTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG-NTELGEKAAKMIFE- 591
Query: 290 RVFPNDATIVTVLS 303
+ P+++ + +LS
Sbjct: 592 -MEPDNSGMYVLLS 604
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T A LE K +H +VV +GLE Y+ ++ + + A +F+ I ++
Sbjct: 402 STCAEIAALELGKQVH---GRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK 458
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-L 122
VVSWN M GYA++ F + ++LF MKK +P+ T VL +C + +G E
Sbjct: 459 EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF 518
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGY 176
+ + G AN T +I+L ++ A + M E + W S I+G
Sbjct: 519 YSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 578
Query: 177 ISCGDIVSARCLFELAPE 194
G+ +A+ +FE+ P+
Sbjct: 579 TELGE-KAAKMIFEMEPD 595
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/535 (38%), Positives = 317/535 (59%), Gaps = 12/535 (2%)
Query: 18 LHQIQTQVVTSGLEKSDYITPR-IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
L +I VVT+G ++ ++ + IITAC M YARKMFD++ ++V WN + GYA
Sbjct: 45 LSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYA 104
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ L++ M P+ +TFP V++SC ++ALREG+E+HC ++K+GF +++F
Sbjct: 105 DAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVF 164
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LA 192
V ++L+ +YS VFGEM RN+V WT++I GY+ +F
Sbjct: 165 VQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSG 224
Query: 193 PERDVILWNTIVSG-----YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+ + + +++ ++++ +I + + DV N +++ Y G+VE
Sbjct: 225 TQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV-DPDVSLTNALIALYGKCGNVETA 283
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ LF+ M +N+ SWN +I Y N + F+RM E +V + T+V+V+SACA
Sbjct: 284 RSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAE-KVDFDYITMVSVISACAS 342
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGAL+ +W+H + G + NV + NALIDMYAKCG I+ A +VF + + +++W ++
Sbjct: 343 LGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSM 402
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I A HG G AL LF MK+ G P+ TF + AC H GLVEEG +F+SM DYS
Sbjct: 403 IGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYS 462
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I+P +EH CMVDLL RAG L EA +F+ +MP+E D +W LLGSCR++ N+ELAEL
Sbjct: 463 IMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVA 522
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E+L L+P+ +V++SNIY + GRW+D AR++ M + KK+PG S +EVN
Sbjct: 523 EKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNR 577
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 320/567 (56%), Gaps = 40/567 (7%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H + T L Q+ S + D++ + C + + + AR +FD++ +++VVS
Sbjct: 6 HQPHAKRTMRLRSPPLQLHAS--PEFDFLERHDLRGCVRYRNLRAARLLFDQMPERDVVS 63
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKINALREGEEL--- 122
WNAM +GYAQN + + +F D MP N ++ +L + V+ + + L
Sbjct: 64 WNAMLSGYAQNGYVKEAKEIF------DEMPCKNSISWNGMLAAYVQNGRIEDARRLFES 117
Query: 123 ---------HCL----VLKNGF------------RANIFVGTALIELYSTGKAIEAAYKV 157
+C+ V +N R + T + G+ +EA ++
Sbjct: 118 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQ-RL 176
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F E R+V WT+M++GY+ G + AR +F+ PE++ + WN I++GY+ + M +AR
Sbjct: 177 FEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQAR 236
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+LF+ MP ++V SWNTM++GYA NGD+ + + F+ MP+R+ SW +I GYA +G E
Sbjct: 237 ELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEE 296
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
L F M +G N +T + LS CA + AL+ K VH G + VGNAL+
Sbjct: 297 ALHLFVEMKRDGERL-NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALL 355
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
MY KCG I++A VF ++ K++++WNT+I+G A HG G AL LF MK G +PD +
Sbjct: 356 VMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDV 415
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T +G+L AC+H GLV++G YF SM DY I +HY CM+DLL RAGRL +A + +K
Sbjct: 416 TMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKN 475
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP E DA W LLG+ R++ N EL E A + + E+EP N +V+LSN+Y GRW DV
Sbjct: 476 MPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 535
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV 544
R+++ MRD G KK+PG S +EV +
Sbjct: 536 GRMRLRMRDRGVKKVPGYSWVEVQNKI 562
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/577 (37%), Positives = 320/577 (55%), Gaps = 43/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E + + +I Q++++GL + R++ CA + + + Y K+ + + NV S
Sbjct: 62 EACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFS 121
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN GY ++E V+L+ M +K A+P+ +T+P++ K C + E+ V
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------ 180
++ GF +++FV A+I + + + AA K+F E R++V W S+INGY+ CG
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 181 -------------------DIVSARCLFE-LAPERD-------------VILWNTIVSGY 207
+VSA E LA R V L N ++ Y
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I +N+ A+ LF+ M KK V+SW TM+ GYA G +E RLF EMPE++V WN LIG
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ E L F M V P+ T+V LSAC++LGALD W+H Y + +
Sbjct: 362 GFVQAKRSKEALALFHEM-QASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
NV +G AL+DMYAKCG I+ A+ VF M ++ +TW II GLA+HG+ A+S F EM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEM 480
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ G +PD ITFIG+L AC H GLV++G YF M Y I P+++HY C+VDLL RAG
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGF 540
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA + ++ MP E DAV+W L R++ NV + E A +L EL+P + +V+L+N+
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANM 600
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
YGD W+ +++ M + G +K PGCSSIE+N +V
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLV 637
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 51/343 (14%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ A E L + LHQ + GL + + ++ + K + A+ +F+ +T +
Sbjct: 264 SASAQLENLALGRKLHQ---SIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKK 320
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-------------------------- 97
VVSW M GYA+ + V LF +M + D +
Sbjct: 321 TVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQ 380
Query: 98 -----PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
P+ T L +C ++ AL G +H V K+ N+ +GTAL+++Y+ I+
Sbjct: 381 ASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIK 440
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSG 206
A +VF EM RN + WT++I G G +A F L P D I + ++S
Sbjct: 441 KAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP--DEITFIGVLSA 498
Query: 207 YIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVF 260
+ + R F QM K IS ++ ++ G +EE + L MP E +
Sbjct: 499 CCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAV 558
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
W L G +G A ++L + P+D I +L+
Sbjct: 559 VWGALFFGSRIHGNVHMGERAASKLL---ELDPHDGGIYVLLA 598
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 331/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ +HL QIQTQ++ +G +S + + C + + YA ++F+ I + +N
Sbjct: 43 KSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNL 102
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ + +N R V+LF Q+++ P+ FT+P V K+ + +REGE+++ V+K+G
Sbjct: 103 VIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSG 162
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC----------- 179
+ +V +L+++Y+ ++ +VF EM +R+VV W +I+GY+ C
Sbjct: 163 LEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFR 222
Query: 180 ------------GDIVS------ARCLFELAPE-----RD-----VILWNTIVSGYIDVR 211
+VS A + EL E R+ + + N +V Y
Sbjct: 223 RMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCG 282
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
++ AR++F+ MP K VI W +M+SGY N G ++E + LFE P R+V W +I GY
Sbjct: 283 HLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQ 342
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F + + F+ M + RV P+ T+V +L+ CA+LG L+ KW+H Y + N +
Sbjct: 343 FNRFDDAVALFREMQIK-RVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAV 401
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG ALI+MYAKCG IE ++++FN + KD +W +II GLAM+G+ + AL LF EM G
Sbjct: 402 VGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTG 461
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD ITFIG+L AC+H GLVEEG +F+SM Y I P++EHYGC++DLL RAG+L EA
Sbjct: 462 VKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEA 521
Query: 452 VDFVKRMPIEADAVI---WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
+ +++ P + VI + LL +CR + NVE+ E +RL +E + + +L+NIY
Sbjct: 522 EELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIY 581
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RW+DV +++ M+D G KK+PGCSS+EVN +V
Sbjct: 582 ASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIV 617
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/540 (39%), Positives = 317/540 (58%), Gaps = 9/540 (1%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSW 68
++ T K L QI ++ + ++ + I + IT C QL +AR +FD + + +
Sbjct: 10 QRCRTRKTLLQIHALILRNAIDANVNILTKFITTCGQLSSTRHARHLFDNRSHRGDTFLC 69
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDA----MPNCFTFPIVLKSCVKINALREGEELHC 124
N+M + R + FT K L +P+ FTF ++ K C A+ EG E H
Sbjct: 70 NSMIKSHV---VMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVWEGLETHG 126
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K GF +++V TAL+++Y+ + A KVF +M +R++V WT++I GY+ GD+ +
Sbjct: 127 HVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGN 186
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
A LF+L P RD +N ++ GY+ V +M AR LFD+MP+++VISW +M+ GY NNGDV
Sbjct: 187 AWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDV 246
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ LF+ MPE+N+ SWN +IGGY N E L F+ + + PN+ T+V++L A
Sbjct: 247 LSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTVVSILPA 306
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
A LGAL+ +WVH + + V V +L+DMY KCG I A VF+ + K+ TW
Sbjct: 307 IATLGALELGEWVHRFVQRKKLDAAVNVCTSLVDMYLKCGEISKARKVFSEIPKKETATW 366
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +I+G AM+G + AL F EM+ G P+ IT G+L AC+H GLVEEG F++M +
Sbjct: 367 NALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKGQFKAM-I 425
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ + P+IEHYGC+VDLL RAG L EA + +K MP EA+ +I ++ +C +V A+
Sbjct: 426 ESGLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFSNDVTRAQ 485
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L + +EP N +VM+ N+Y RWKDV I MR G KK G S+IEV+ V
Sbjct: 486 RVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKKEVGSSAIEVDSRV 545
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 300/503 (59%), Gaps = 16/503 (3%)
Query: 50 MTYARKMFDKI---TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIV 106
M Y+ +F ++ + +V WNAM GYA N + + +F +M + P+ FT+P V
Sbjct: 1 MDYSNLIFSQMGHDSSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYV 60
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-----------STGKAIEAAY 155
+ SC ++ G+ +HC ++K+GF ++ V +L +Y ++ ++ A
Sbjct: 61 INSCCELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYAR 120
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
K+F +M R V +W MI Y++ GD+ SAR LF++ PERD++ WN+++ GY +
Sbjct: 121 KIFDDMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVAN 180
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR LF++MP+K+VISW +M+ YA+ D+E + FE MP+RNV SWN +I YA +G F
Sbjct: 181 ARGLFEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKF 240
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E L+ F +M +EG V P+ T V+VLSAC+ LG L+F K++H Y + Q V VG A
Sbjct: 241 VESLNLFVQMQSEG-VTPDGYTFVSVLSACSNLGDLEFGKYIH-YLSGDLSQSEVMVGTA 298
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L +MYA+CG ++ A VF + +D+ WN II LA+HGR A+ +F M+ G P+
Sbjct: 299 LTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPN 358
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
TF L AC+H GLVEEG F SM DY I+P+I HYGC++D+L R G+L EA+ V
Sbjct: 359 DFTFTSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLV 418
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+ MP + D IW LLG CRV +++LAE +E+ TE+E +V+LSNI+ G+W
Sbjct: 419 EDMPFQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWI 478
Query: 516 DVARIKVAMRDTGFKKLPGCSSI 538
+ A + M + K G S +
Sbjct: 479 EAADARKKMDEKKISKKTGSSVV 501
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 169/417 (40%), Gaps = 93/417 (22%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK-----------QMTYARKMFDK 59
+LE ++ ++V SG E S + + ++ ++ YARK+FD
Sbjct: 66 ELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDD 125
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + V WN M Y V I ++
Sbjct: 126 MCVRPVELWNQMIGKY-----------------------------------VNIGDVKSA 150
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
EL ++ + +I ++I Y+ G + A +F +M E+NV+ WTSMI Y
Sbjct: 151 RELFDIMPER----DIVSWNSMILGYAKGGKVANARGLFEKMPEKNVISWTSMIGAYADT 206
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----------- 228
D+ +AR FE P+R+V+ WN+++S Y +E+ LF QM + V
Sbjct: 207 DDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSVL 266
Query: 229 ---------------------ISWNTMLSG------YANNGDVEECKRLFEEMPERNVFS 261
+S + ++ G YA GDV++ +F ++ +R+VF
Sbjct: 267 SACSNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQCGDVDKAFAVFIKIGKRDVFC 326
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +I A +G E + F M G + PND T + L AC+ G ++ +
Sbjct: 327 WNVIIKALALHGRSEEAIKIFLLMRKTG-LKPNDFTFTSALFACSHGGLVEEGHIIFNSM 385
Query: 322 EYNGYQ--GNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
E + Y+ + LIDM + G +E A+ + M + D+ W ++ G + G
Sbjct: 386 EKD-YKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVTG 441
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/583 (37%), Positives = 323/583 (55%), Gaps = 13/583 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L++ Q ++ GL + Y+ ++ + YA +F + N+ +N +
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKI-NALREGEELHCLVLKNG 130
G N+ R V ++ M++ P+ FTFP VLK+C ++ + G LH LV+K G
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----R 186
F ++FV T L+ LYS + A KVF E+ E+NVV WT++I GYI G A R
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNG 242
L E+ D I+ V ++ R + M + +V +++ YA G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+EE +R+F+ M E++V W+ LI GYA+NG+ E LD F M E V P+ +V V
Sbjct: 253 SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRE-NVRPDCYAMVGVF 311
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SAC+RLGAL+ W + + + N +G ALID YAKCG + A +VF M KD +
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+N +ISGLAM G A +F +M G PDG TF+G+LC CTH GLV++G YF M
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM 431
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ +S+ P IEHYGCMVDL ARAG L EA D ++ MP+EA++++W LLG CR++K+ +L
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQL 491
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
AE L++L ELEP N ++V+LSNIY RW + +I+ ++ G +KLPGCS +EV+
Sbjct: 492 AEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDG 551
Query: 543 VV---MLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVVI 582
VV ++G S L K + E+ L +P T V+
Sbjct: 552 VVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLF 594
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 319/568 (56%), Gaps = 44/568 (7%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNA 70
+E K LH +V SGL Y ++I + A Q + +A K+F++I WN
Sbjct: 324 MEAVKKLH---AHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNT 380
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ G AQ++ + +V + + ++ P+ TFP VLK+C K A +EGE++H V+K G
Sbjct: 381 LLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLG 440
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +IFV +LI LY+ + A +F EM ++VV W S+I GY LFE
Sbjct: 441 FLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFE 500
Query: 191 LAP---------------------------------------ERDVILWNTIVSGYIDVR 211
L E DV L NT++ Y +
Sbjct: 501 LMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIG 560
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ A K+F QM K+ ++ N M+ YA G++ K++F+++P +++ SW+ +I Y+
Sbjct: 561 QLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQ 620
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F + L+ F++M +V P+ I +VLSACA LGALD KW+H Y N + +
Sbjct: 621 ASHFSDSLELFRQM-QRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTI 679
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ N+LIDM+AKCG ++ A+ VF M+ KD ++WN+II GLA +G AL++F+ M G
Sbjct: 680 MENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEG 739
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF+G+L AC + LV+EGL +F+ M +++ PQ++HYGC+V +L+RAG+L +A
Sbjct: 740 PRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKA 799
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+F+ MP+ D V+W LLG+C+ + NV +AE+A ++L+EL+P N ++++LSNIY
Sbjct: 800 KNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNIYASA 859
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIE 539
RW D ++ M DT +K P CS ++
Sbjct: 860 DRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 217/330 (65%), Gaps = 2/330 (0%)
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP K+V+SWN +++G+A G++E + LF++MP RNV SW GLI GY L+ E + F
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ M+ G + P++ T++ V+ A + LG + + +H Y G + VGN+LID+YAK
Sbjct: 61 RHMMAGG-ISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAK 119
Query: 343 CGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
G ++N++ VF+ M D ++L++W +IISG AMHG AL LF EM+ AG P+ ITF+
Sbjct: 120 IGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLS 179
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
++ AC+H GLVE+GL++F+SM +Y+I P+I+H+GC++D+L RAGRL EA ++ +P+E
Sbjct: 180 VINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVE 239
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
+ ++W LLG C Y VE+ + A++ +++LE ++ +F +LSN+ +LGR+ D + +
Sbjct: 240 VNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQAR 299
Query: 522 VAMRDTGFKKLPGCSSIEVNEVVMLGCLSR 551
+ + K+PG + + VM+ + +
Sbjct: 300 KLLDERKIVKVPGLALVVTRSFVMMEAVKK 329
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 220/524 (41%), Gaps = 57/524 (10%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A ++ YAR +FD++ +NVVSW + +GY + + V LF M P+
Sbjct: 12 VITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPS 71
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V+ + + + GE LH +K G ++ VG +LI+LY+ +++ + KVF
Sbjct: 72 EITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFD 131
Query: 160 EM-DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVIL------------- 199
EM D RN+V WTS+I+G+ G V A LF + P R L
Sbjct: 132 EMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVE 191
Query: 200 -----WNTIVSGY------------IDVR----NMIEARKLFDQMP-KKDVISWNTMLSG 237
+ ++V Y ID+ + EA ++ + +P + +VI W +L
Sbjct: 192 QGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGC 251
Query: 238 YANNGDVEECKRLFEEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV--FP 293
+ G+VE KR + + ER ++ N F + +++L E ++ P
Sbjct: 252 CSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVP 311
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA-KCGIIENAVDV 352
A +VT ++ K +H + +G + +I YA + + A V
Sbjct: 312 GLALVVT-----RSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKV 366
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F +++ WNT++ GLA A+ + + + G PD +TF +L AC
Sbjct: 367 FEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAP 426
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EG S + + I ++ L A G L A M ++ D V W +L+G
Sbjct: 427 KEG-EQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVK-DVVSWNSLIG 484
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG--DLGRW 514
+N LAL L + E M+ I LG W
Sbjct: 485 GYS-QRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDW 527
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 45/258 (17%)
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M +NVV W +I G+ G+I AR LF+ P R+V+ W ++ GY EA LF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 221 DQM-----------------------------------PKKDVIS----WNTMLSGYANN 241
M KK ++S N+++ YA
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 242 GDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G V+ ++F+EM + RN+ SW +I G+A +GL E L+ F M G + PN T ++
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAG-IRPNRITFLS 179
Query: 301 VLSACARLGALD--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V++AC+ G ++ + + + EYN + +IDM + G + A + +
Sbjct: 180 VINACSHGGLVEQGLAFFKSMVYEYN-IDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPV 238
Query: 359 K-DLITWNTIISGLAMHG 375
+ ++I W ++ + +G
Sbjct: 239 EVNVIVWRILLGCCSKYG 256
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 321/552 (58%), Gaps = 12/552 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
KHL I ++ GL++ Y+ +++ Y+ ++ D+ + N+ +N M G
Sbjct: 24 KHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGL 83
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N+ + + ++ M+K P+ FTFP VLK+C ++ G ++H LV+K G A+
Sbjct: 84 VLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADA 143
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFEL 191
FV +LI LY+ I+ A+KVF ++ ++N WT+ I+GY+ G A R L E+
Sbjct: 144 FVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEM 203
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEEC 247
D ++S ++ + + + + ++V ++ Y G++E
Sbjct: 204 GLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERA 263
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F+ M E+N+ SW+ +I GYA+NGL E LD F +ML EG + P+ +V VL +CAR
Sbjct: 264 RSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG-LKPDCYAMVGVLCSCAR 322
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGAL+ W N + N +G ALIDMYAKCG ++ A +VF M KD + WN
Sbjct: 323 LGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAA 382
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISGLAM G AL LF +M+ +G PD TF+G+LCACTH GLVEEG YF SM ++
Sbjct: 383 ISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFT 442
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P+IEHYGCMVDLL RAG L EA +K MP+EA+A++W LLG CR++++ +L E+ L
Sbjct: 443 LTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVL 502
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV--- 544
++L LEP + N+V+LSNIY +W++ A+I+ M + G KK+PG S IEV+ VV
Sbjct: 503 KKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQF 562
Query: 545 MLGCLSRELDRK 556
++G S L K
Sbjct: 563 LVGDTSHPLSEK 574
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/568 (35%), Positives = 316/568 (55%), Gaps = 44/568 (7%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK-QMTYARKMFDKITDQNVVSWNA 70
+E K LH + SGL Y +++ + A L+ + +A K+FD+I WN
Sbjct: 1 MEAIKRLH---AYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNI 57
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ G AQ++ + + + + +P+ TFP +LK+C +INAL EGE++H + K G
Sbjct: 58 LIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLG 117
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++IFV +LI LY+ + A VF EM ++VV W S+I GY C LF+
Sbjct: 118 LLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFK 177
Query: 191 LAP---------------------------------------ERDVILWNTIVSGYIDVR 211
L E DV L NT+V +
Sbjct: 178 LMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRG 237
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ A K+F M +++++ N M++ YA D+ +++F+++P++++ SW+ +I GY+
Sbjct: 238 QLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQ 297
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F + L+ F++M +V P+ I +V+S+CA LGALD KWVH Y N + +
Sbjct: 298 ANHFSDALEIFRQM-QRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTI 356
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ N+LIDMY KCG + A+ VF M KD ++WN+II GLA +G +L+LF M G
Sbjct: 357 MENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEG 416
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+G+TF+G+L AC + LVEEGL +F+SM YS+ PQ++HYGC+VDLL RAG+L +A
Sbjct: 417 FRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKA 476
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+ F+ MPI+ D V+W LLGSC + +V +AE+ ++L ELEP N N+ +LSN Y
Sbjct: 477 LRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASA 536
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIE 539
RW + ++ M DT +K PGCS++E
Sbjct: 537 HRWSEAMNVRQCMADTDVRKSPGCSAVE 564
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/491 (40%), Positives = 293/491 (59%), Gaps = 33/491 (6%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
M YA ++F IT+ + WN M G AQ+ + L++QM+ P+ FTFP VLK+
Sbjct: 28 MAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKA 87
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C ++ ++ G +H V + GF +N FV LI ++
Sbjct: 88 CTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHA----------------------- 124
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
+CGD+ AR LF+ + +RDV+ W+ + +GY + AR+LFD+MP KD++
Sbjct: 125 --------NCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLV 176
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
SWN M++GYA G++E ++LF+E+P+R+V +WN +I GY G + L+ F+ M + G
Sbjct: 177 SWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVG 236
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG-NVCVGNALIDMYAKCGIIEN 348
+ P++ T++++LSAC LG LD + +H G++ +V +GNALIDMYAKCG I
Sbjct: 237 EL-PDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVR 295
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A++VF M KD+ TWN+++ GLA HG ++ LF EM+ PD ITF+G+L AC+H
Sbjct: 296 ALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSH 355
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G VEEG YF M +Y+I P I HYGCMVDLL RAG L EA DF+ M IE +A++W
Sbjct: 356 AGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWR 415
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LLG+CR++ NVEL A +L ++ ++V+LSNIY G W V +++ M D+G
Sbjct: 416 TLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSG 475
Query: 529 FKKLPGCSSIE 539
+K GCS IE
Sbjct: 476 VRKEAGCSLIE 486
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 166/367 (45%), Gaps = 53/367 (14%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ +V G E + ++ +I A + AR +FD ++VV+W+A+ GYA+
Sbjct: 100 VHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGE 159
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
LF D MP +K V N + G
Sbjct: 160 LGVARQLF------DEMP--------VKDLVSWNVMITG--------------------- 184
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERD 196
Y+ +E+A K+F E+ +R+VV W +MI GY+ CG A +FE + D
Sbjct: 185 ----YAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPD 240
Query: 197 VILWNTIVSGYIDVRNMIEARKL---FDQMPKKD--VISWNTMLSGYANNGDVEECKRLF 251
+ +++S D+ ++ +++ +M +D V+ N ++ YA G + +F
Sbjct: 241 EVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVF 300
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ M E++V +WN ++GG A +G + + F M + ++ P++ T V VL AC+ G +
Sbjct: 301 QGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEM-RKLKIRPDEITFVGVLVACSHAGRV 359
Query: 312 DFSKWVH--VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTII 368
+ + + EYN + N+ ++D+ + G++ A D ++M + + I W T++
Sbjct: 360 EEGRQYFDLMRDEYN-IEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 418
Query: 369 SGLAMHG 375
+HG
Sbjct: 419 GACRIHG 425
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A+ +M ARK+FD++ ++VV+WNAM GY ++ + +F +M+ + +P+
Sbjct: 181 MITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPD 240
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFR-ANIFVGTALIELYSTGKAIEAAYKVF 158
T +L +C + L G+ +HC + + GFR ++ +G ALI++Y+ +I A +VF
Sbjct: 241 EVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVF 300
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
M E++V W S++ G F E+ + L+ E RK
Sbjct: 301 QGMREKDVSTWNSVLGGLA-----------FHGHAEKSIHLFT-------------EMRK 336
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYANNG 273
L + D I++ +L ++ G VEE ++ F+ M E N+ + ++ G
Sbjct: 337 L---KIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAG 393
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
L E D M E PN T+L AC G ++ +
Sbjct: 394 LLNEAFDFIDTMKIE----PNAIVWRTLLGACRIHGNVELGR 431
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 129/325 (39%), Gaps = 75/325 (23%)
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
S A +G + +LF + E + F WN +I G A + + + +M G V P+
Sbjct: 20 SSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQM-ENGCVRPDK 78
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE-------- 347
T VL AC RL + VH G++ N V N LI +A CG +
Sbjct: 79 FTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDG 138
Query: 348 -----------------------NAVDVFNSMDTKDLITWNTIISGLAMHGR-------- 376
A +F+ M KDL++WN +I+G A G
Sbjct: 139 SAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLF 198
Query: 377 -----------------------GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
AL +F EM++ GE+PD +T + +L ACT +G ++
Sbjct: 199 DEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLD 258
Query: 414 EGLSYFQSMA----MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G ++ D S++ ++D+ A+ G + A++ + M E D W +
Sbjct: 259 AGQRIHCCISEMGFRDLSVLLG----NALIDMYAKCGSIVRALEVFQGMR-EKDVSTWNS 313
Query: 470 LLGSCRVYKNVELAELALERLTELE 494
+LG + + AE ++ TE+
Sbjct: 314 VLGGLAFHGH---AEKSIHLFTEMR 335
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 65/175 (37%), Gaps = 33/175 (18%)
Query: 325 GYQGNVCVGNALI--DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
G+ N LI A G + A +F + D WNT+I G A A+S
Sbjct: 5 GFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAIS 64
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEG---------------------LSYFQS 421
L+ +M+N PD TF +L ACT + V+ G L YF +
Sbjct: 65 LYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHA 124
Query: 422 MAMDYSIVPQIEHYGCMVDLL---------ARAGRLAEAVDFVKRMPIEADAVIW 467
D ++ + D++ AR G L A MP++ D V W
Sbjct: 125 NCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK-DLVSW 178
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 319/574 (55%), Gaps = 42/574 (7%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNA 70
L + HL Q ++V +GL S + P ++ A +A + VS N
Sbjct: 12 LGSPHHLRQAHARLVAAGLSASPRLLPALVAAAFSAHSPRHASAALRAAGPAASSVSHNT 71
Query: 71 MFNGYAQNEFHRTV----VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+ A HR V + +T M PN FTF +L++C + R +H +
Sbjct: 72 LIERLAGARGHRPVPADALAAYTAMLAAGVPPNGFTFTFLLRACALLGFPRPCRCVHGQI 131
Query: 127 LKNGFRANIFVGTALIELY----STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
++ GF + +FV L+++Y G+ + AA +VF EM +R+VV W S+I Y+S GD
Sbjct: 132 VRWGFGSEVFVQNTLLDVYYRCGGPGR-VAAARQVFDEMVDRDVVSWNSIIGVYMSSGDY 190
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
A LFE PER+V+ WNT+V+G+ V +M+ A+ +FD+MP ++ ISWN M+SGYA++G
Sbjct: 191 TGAMELFEAMPERNVVSWNTLVAGFARVGDMVTAQTVFDRMPSRNAISWNLMISGYASSG 250
Query: 243 DVEEC--------------------------------KRLFEEMPERNVFSWNGLIGGYA 270
DVE K LF+ MP +N+ SWN +I GY
Sbjct: 251 DVEAARSMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYN 310
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+N + E L F+ M+ EGR P++AT+V+V+SACA+LG++++ W+ + + +
Sbjct: 311 HNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTI 370
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+GNALIDM+AKCG + A +F M T+ +ITW T+ISG A +G AL +++ M
Sbjct: 371 ALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTTMISGFAFNGLCREALLVYNNMCRE 430
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G D + FI L AC H GL++EG S F M Y+I P++EHYGC+VDLL RAG L E
Sbjct: 431 GVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQE 490
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
AV F++ MP+E VIWA LL SC + N E + +++TELEP N + V++SN
Sbjct: 491 AVLFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYVSKKITELEPFNSSYQVLVSNSSAL 550
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW V + MR+ G +K+PG SSI+V V
Sbjct: 551 EGRWDGVIGARTIMRNWGIEKVPGSSSIQVGSEV 584
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 88/190 (46%), Gaps = 8/190 (4%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + ++ + I + + S + + + +I A+ + A+ +F ++ + +++W
Sbjct: 347 QLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRCIITWTT 406
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKN 129
M +G+A N R ++++ M + + F L +CV L+EG + + +V +
Sbjct: 407 MISGFAFNGLCREALLVYNNMCREGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQY 466
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCG-----DIV 183
+ + +++L ++ A M E +VV+W ++++ ++ G D V
Sbjct: 467 NIQPRMEHYGCVVDLLGRAGNLQEAVLFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYV 526
Query: 184 SARCLFELAP 193
S + + EL P
Sbjct: 527 SKK-ITELEP 535
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/577 (37%), Positives = 319/577 (55%), Gaps = 43/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E + + +I Q++++GL + R++ CA + + + Y K+ + + N S
Sbjct: 62 EACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFS 121
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN GY ++E V+L+ M +K A+P+ +T+P++ K C + E+ V
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------ 180
++ GF +++FV A+I + + + AA K+F E R++V W S+INGY+ CG
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241
Query: 181 -------------------DIVSARCLFE-LAPERD-------------VILWNTIVSGY 207
+VSA E LA R V L N ++ Y
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMY 301
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I +N+ A+ LF+ M KK V+SW TM+ GYA G +E RLF EMPE++V WN LIG
Sbjct: 302 IKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIG 361
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ E L F M V P+ T+V LSAC++LGALD W+H Y + +
Sbjct: 362 GFVQAKRSKEALALFHEM-QASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLT 420
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
NV +G AL+DMYAKCG I+ A+ VF M ++ +TW II GLA+HG+ A+S F EM
Sbjct: 421 MNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEM 480
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ G +PD ITFIG+L AC H GLV++G YF M Y I P+++HY C+VDLL RAG
Sbjct: 481 ISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGF 540
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA + ++ MP E DAV+W L R++ NV + E A +L EL+P + +V+L+N+
Sbjct: 541 LEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANM 600
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
YGD W+ +++ M + G +K PGCSSIE+N +V
Sbjct: 601 YGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLV 637
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 51/343 (14%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ A E L + LHQ + GL + + ++ + K + A+ +F+ +T +
Sbjct: 264 SASAQLENLALGRKLHQ---SIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKK 320
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-------------------------- 97
VVSW M GYA+ + V LF +M + D +
Sbjct: 321 TVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQ 380
Query: 98 -----PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
P+ T L +C ++ AL G +H V K+ N+ +GTAL+++Y+ I+
Sbjct: 381 ASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIK 440
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSG 206
A +VF EM RN + WT++I G G +A F L P D I + ++S
Sbjct: 441 KAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP--DEITFIGVLSA 498
Query: 207 YIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVF 260
+ + R F QM K IS ++ ++ G +EE + L MP E +
Sbjct: 499 CCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAV 558
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
W L G +G A ++L + P+D I +L+
Sbjct: 559 VWGALFFGSRIHGNVHMGERAASKLL---ELDPHDGGIYVLLA 598
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/569 (36%), Positives = 329/569 (57%), Gaps = 39/569 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIIT---ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
QI ++ + L+ ++++ +++ AC+ + YAR +FD+I + WN M Y
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80
Query: 77 QNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
++ + + LF QM+ + +P + ++ +V+++C ++ G++LH VLK G +++
Sbjct: 81 NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV TALIE+Y+ GDI AR + +
Sbjct: 141 FVETALIEMYA-------------------------------KFGDIEIARNILDEMAHP 169
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D++ +N +++ Y+ V + A LFD+MP++D++SWNTM+ G+A+ GDV K+LF+
Sbjct: 170 DLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTC 229
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ER++ SW+ +I YA E L F M V P+ T+V+VLSAC +GAL K
Sbjct: 230 ERDLISWSSMIAAYAKARQSNEALRLFHEMQL-ANVLPDKVTMVSVLSACGDVGALGMGK 288
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
+H E N + ++ +G +L+DMYAKCG I+N++ VFN M+ +D+ W+ +I GLA HG
Sbjct: 289 MIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHG 348
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G AL F +M + P+ +TFIG+L AC+H+GLV+EG +YF SM+ Y + P+IEHY
Sbjct: 349 FGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHY 408
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GC+VD+L RAGRL EA++ +K MP DA++W LLG+CR+YKNVE+AE A L ELEP
Sbjct: 409 GCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEP 468
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV--MLGCLSREL 553
N+V+LSNIY W V ++ M++ +K+PG SSIEV+ V +
Sbjct: 469 HVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHP 528
Query: 554 DRKSIVRAEANMIKLLPQNNH-PLTFIVV 581
+ K I+R + + L N + PLT V+
Sbjct: 529 ESKKILRMLSEITARLKANGYAPLTASVL 557
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/569 (35%), Positives = 317/569 (55%), Gaps = 44/569 (7%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK-QMTYARKMFDKITDQNVVSWN 69
++E K LH + SGL Y +++ + A L+ + +A K+FD+I WN
Sbjct: 465 RMEAIKRLH---AYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWN 521
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ G AQ++ + + + + +P+ TFP +LK+C +INAL EGE++H + K
Sbjct: 522 ILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKL 581
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++IFV +LI LY+ + A VF EM ++VV W S+I GY C LF
Sbjct: 582 GLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALF 641
Query: 190 ELAP---------------------------------------ERDVILWNTIVSGYIDV 210
+L E DV L NT+V +
Sbjct: 642 KLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRR 701
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ A K+F M +++++ N M++ YA D+ +++F+++P++++ SW+ +I GY+
Sbjct: 702 GQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYS 761
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
F + L+ F++M +V P+ I +V+S+CA LGALD KWVH Y N + +
Sbjct: 762 QANHFSDALEIFRQM-QRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADT 820
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ N+LIDMY KCG + A+ VF M KD ++WN+II GLA +G +L+LF M
Sbjct: 821 IMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTE 880
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+G+TF+G+L AC + LVEEGL +F+SM YS+ PQ++HYGC+VDLL RAG+L +
Sbjct: 881 GFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEK 940
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A+ F+ MPI+ D V+W LLGSC + +V +AE+ ++L ELEP N N+ +LSN Y
Sbjct: 941 ALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYAS 1000
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
RW + ++ M DT +K PGCS++E
Sbjct: 1001 AHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 261/477 (54%), Gaps = 66/477 (13%)
Query: 46 QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPI 105
QL Q+ +++ + ++ D+ W+A+ Y+ + + LF + A + + F
Sbjct: 37 QLLQI-HSQLIAHQVFDRRPTPWHALLKAYSHGPHPQDALQLFRH-ARWHAADDTYAFTF 94
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
LK+C + R +LH LV++ GF +V TAL+
Sbjct: 95 ALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALV----------------------- 131
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
N YI CG CL ++R F++MP
Sbjct: 132 --------NVYILCG------CL-------------------------ADSRMAFEEMPV 152
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
K+ +SWN +++G+A G+VE + LFE MP RNV SW+G+I GY E + F+RM
Sbjct: 153 KNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRM 212
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
+ EG + P++ T++ V+ A + +G + + +H Y E G +V VGN+LID+YAK G
Sbjct: 213 MAEG-ISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGS 271
Query: 346 IENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
I+N++ VF+ M D ++L++W +IISG AMHG A+ LF +M+ AG P+ ITF+ +L
Sbjct: 272 IQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLH 331
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+H GLVE+G+++F+SM +Y+I P ++H+GC++D+L RAGRL EA ++ P+E +A
Sbjct: 332 ACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNA 391
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
+W LLG C Y VE+ E ++++ LE + +FV+LSN+ +L R+ D ++
Sbjct: 392 TVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVR 448
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 203/448 (45%), Gaps = 38/448 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
+I A++ + + ++FD++ D+ N+VSW ++ +G+A + V LF M++ P
Sbjct: 262 LIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRP 321
Query: 99 NCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
N TF VL +C + +G ++ + ++ +I++ + A ++
Sbjct: 322 NRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQI 381
Query: 158 FGEMD-ERNVVVWTSMINGYISCGDI-VSARCLFE-LAPERD-----VILWNT------- 202
+ E N VW +++ G++ + R + + LA ER+ V+L N
Sbjct: 382 IRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRF 441
Query: 203 ----IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN---------------NGD 243
IV +D RN +++ +M + ++SG N D
Sbjct: 442 SDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPD 501
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ ++F+++ F WN LI G A + + + AF + G + P++ T +L
Sbjct: 502 LVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAI-AFYKKAQGGGMVPDNLTFPFILK 560
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACAR+ AL+ + +H + G ++ V N+LI +YA CG + A VF+ M KD+++
Sbjct: 561 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVS 620
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I G + R L+LF M+N G D +T I ++ ACT +G Y
Sbjct: 621 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DYMVRYI 679
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEA 451
DY I + +VD R G+L A
Sbjct: 680 EDYCIEVDVYLGNTLVDYFGRRGQLQSA 707
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 214/494 (43%), Gaps = 46/494 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A ++ YAR +F+++ +NVVSW+ M +GY + V LF +M P+
Sbjct: 161 VITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPS 220
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V+ + + + GE LH K G ++ VG +LI+LY+ +I+ + +VF
Sbjct: 221 EITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFD 280
Query: 160 EM-DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDV---ILWNTIVSGYID 209
EM D RN+V WTS+I+G+ G V A LF + P R +L G ++
Sbjct: 281 EMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVE 340
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
+++ DV + ++ G + E +++ + P E N W L+G
Sbjct: 341 QGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGC 400
Query: 269 YANNGLF------FEVLDAFKR-----------MLTEGRVFPNDATIVTVL-------SA 304
+ G + + A +R MLTE R F +DA IV L +
Sbjct: 401 CSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRF-SDAEIVRKLVDQRNSVKS 459
Query: 305 CARLGALDFSKWVHVYAEYNG-YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
+ ++ K +H Y +G Y + + L + A VF+ ++
Sbjct: 460 FFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFL 519
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN +I GLA A A++ + + + G +PD +TF IL AC + + EG +
Sbjct: 520 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEG-EQMHNHI 578
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL---GSCRVYKNV 480
++ I ++ L A G L A M ++ D V W +L+ C +K++
Sbjct: 579 TKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK-DVVSWNSLICGYSQCNRFKDI 637
Query: 481 ELAELALERLTELE 494
LAL +L + E
Sbjct: 638 ----LALFKLMQNE 647
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 180/405 (44%), Gaps = 43/405 (10%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA-IEAAYKVFGEMDERN 165
+KS I + + LH + +G + + ++ Y+ + + A+KVF +++
Sbjct: 457 VKSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPT 516
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPE----RDVILWNTIVSGYIDVRNMIEARKLFD 221
+W +I G A ++ A D + + I+ + + E ++ +
Sbjct: 517 TFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHN 576
Query: 222 QMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+ K D+ N+++ YA G++ + +F+EM ++V SWN LI GY+ F +
Sbjct: 577 HITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKD 636
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--------------- 322
+L FK M EG V + T++ V+SAC RLG + ++ Y E
Sbjct: 637 ILALFKLMQNEG-VKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLV 695
Query: 323 -YNGYQG---------------NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
Y G +G N+ NA+I YAK I +A +F+ + KDLI+W++
Sbjct: 696 DYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSS 755
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISG + + AL +F +M+ A PD I ++ +C H+G ++ G +
Sbjct: 756 MISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRN 814
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+I ++D+ + G EA+ K M E D + W +++
Sbjct: 815 NIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSII 858
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 309/540 (57%), Gaps = 13/540 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFD--------KITDQ 63
L +H+ ++ Q++ GL + + ++I + A L+++ R +F
Sbjct: 108 LPRLRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSS 167
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ + YA N + +F + ++F I + + +R H
Sbjct: 168 TTLLTKTLLRAYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGA---H 224
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K G + FVG ALI+ YS + + A KVF EM R+VV W + + + G++
Sbjct: 225 AHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVD 284
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
+AR +F+ PE+D + WNT++ GY +A +LF +MP ++V+SW+T++S Y GD
Sbjct: 285 AARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGD 344
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E + +F++MP +N+ +W ++ A GL E F M+ + + + +V++L+
Sbjct: 345 MEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMM-DAAIELDVIAVVSILA 403
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLI 362
ACA G+L K +H + + V NAL+DM+ KCG + A +F++ + KDL+
Sbjct: 404 ACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLV 463
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN II G AMHG G AL LF +MK G PD +T I +L ACTHMGLVEEG +F +M
Sbjct: 464 SWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 523
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
DY I PQIEHYGCMVDLL R G + EAVD +KRMP E + VIW +LL +CR++KNVE
Sbjct: 524 ETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEY 583
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
AELA+ L+ L+P + N+ +LSNIY + G+W D+A+ +V M+ TG +K G S IE+NE
Sbjct: 584 AELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNE 643
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 193/504 (38%), Gaps = 103/504 (20%)
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG---------------- 159
LR +ELH +LK G + + LI Y+ + + A VF
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 170
Query: 160 -------------------------EMDERNVVVWTSMINGYISCG--DIVSARC-LFEL 191
+ +R ++ +I + G + A + +L
Sbjct: 171 LTKTLLRAYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKL 230
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
D + N ++ Y + + +A+K+FD+M +DV+SWNT ++ G+V+ + +F
Sbjct: 231 GSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMF 290
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+EMPE++ SWN ++ GYA G + + F+RM GR
Sbjct: 291 DEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRM--PGR--------------------- 327
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
NV + ++ Y K G +E A +F+ M K+L+TW ++S
Sbjct: 328 -----------------NVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSAC 370
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A G A LF EM +A D I + IL AC G + G +
Sbjct: 371 AQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALG-KRIHRHVRQRKLSRS 429
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++D+ + G + A +E D V W ++G ++ E ALE
Sbjct: 430 TLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGP---GEKALELFA 486
Query: 492 ELEPKN-PANFVMLSNIYG---DLGRWKDVARIKVAMR-DTGFKKLPGCSSIEVNEVVML 546
+++ + + V L N+ +G ++ R M D G K ++
Sbjct: 487 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKP----------QIEHY 536
Query: 547 GCLSRELDRKSIVRAEANMIKLLP 570
GC+ L R +++ +MIK +P
Sbjct: 537 GCMVDLLGRGGLIKEAVDMIKRMP 560
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 309/540 (57%), Gaps = 13/540 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFD--------KITDQ 63
L +H+ ++ Q++ GL + + ++I + A L+++ R +F
Sbjct: 36 LPRLRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSS 95
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ + YA N + +F + ++F I + + +R H
Sbjct: 96 TTLLTKTLLRAYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGA---H 152
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K G + FVG ALI+ YS + + A KVF EM R+VV W + + + G++
Sbjct: 153 AHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVD 212
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
+AR +F+ PE+D + WNT++ GY +A +LF +MP ++V+SW+T++S Y GD
Sbjct: 213 AARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGD 272
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E + +F++MP +N+ +W ++ A GL E F M+ + + + +V++L+
Sbjct: 273 MEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMM-DAAIELDVIAVVSILA 331
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLI 362
ACA G+L K +H + + V NAL+DM+ KCG + A +F++ + KDL+
Sbjct: 332 ACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLV 391
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN II G AMHG G AL LF +MK G PD +T I +L ACTHMGLVEEG +F +M
Sbjct: 392 SWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 451
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
DY I PQIEHYGCMVDLL R G + EAVD +KRMP E + VIW +LL +CR++KNVE
Sbjct: 452 ETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEY 511
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
AELA+ L+ L+P + N+ +LSNIY + G+W D+A+ +V M+ TG +K G S IE+NE
Sbjct: 512 AELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNE 571
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 193/504 (38%), Gaps = 103/504 (20%)
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG---------------- 159
LR +ELH +LK G + + LI Y+ + + A VF
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 98
Query: 160 -------------------------EMDERNVVVWTSMINGYISCG--DIVSARC-LFEL 191
+ +R ++ +I + G + A + +L
Sbjct: 99 LTKTLLRAYALNSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKL 158
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
D + N ++ Y + + +A+K+FD+M +DV+SWNT ++ G+V+ + +F
Sbjct: 159 GSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMF 218
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+EMPE++ SWN ++ GYA G + + F+RM GR
Sbjct: 219 DEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRM--PGR--------------------- 255
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
NV + ++ Y K G +E A +F+ M K+L+TW ++S
Sbjct: 256 -----------------NVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSAC 298
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A G A LF EM +A D I + IL AC G + G +
Sbjct: 299 AQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALG-KRIHRHVRQRKLSRS 357
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++D+ + G + A +E D V W ++G ++ E ALE
Sbjct: 358 TLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGP---GEKALELFA 414
Query: 492 ELEPKN-PANFVMLSNIYG---DLGRWKDVARIKVAMR-DTGFKKLPGCSSIEVNEVVML 546
+++ + + V L N+ +G ++ R M D G K ++
Sbjct: 415 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKP----------QIEHY 464
Query: 547 GCLSRELDRKSIVRAEANMIKLLP 570
GC+ L R +++ +MIK +P
Sbjct: 465 GCMVDLLGRGGLIKEAVDMIKRMP 488
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 304/513 (59%), Gaps = 33/513 (6%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ + I+AC+ L + A F + + NV+ +NA+ G + +V + M +
Sbjct: 11 FLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRN 70
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ MP ++F ++K+C + GE +H V K+GF +++FV T LIE YST
Sbjct: 71 NVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYST------- 123
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
GD+ +R +F+ PERDV W T++S ++ +M
Sbjct: 124 ------------------------FGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMA 159
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A +LFD+MP+K+V +WN M+ GY G+ E + LF +MP R++ SW ++ Y+ N
Sbjct: 160 SAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKR 219
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ EV+ F ++ +G + P++ T+ TV+SACA LGAL K VH+Y G+ +V +G+
Sbjct: 220 YKEVIALFHDVIDKGMI-PDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGS 278
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
+LIDMYAKCG I+ A+ VF + TK+L WN II GLA HG AL +F EM+ P
Sbjct: 279 SLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRP 338
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
+ +TFI IL ACTH G +EEG +F SM DY I PQ+EHYGCMVDLL++AG L +A++
Sbjct: 339 NAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEM 398
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ M +E ++ IW LL C+++KN+E+A +A++ L LEP N ++ +L N+Y + RW
Sbjct: 399 IRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRW 458
Query: 515 KDVARIKVAMRDTGF-KKLPGCSSIEVNEVVML 546
+VA+I+ M+D G K+ PG S +E+N+ V L
Sbjct: 459 NEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHL 491
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 131/279 (46%), Gaps = 41/279 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG---------------- 74
E+ + +I+A + M A ++FD++ ++NV +WNAM +G
Sbjct: 139 ERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQ 198
Query: 75 ---------------YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
Y++N+ ++ V+ LF + +P+ T V+ +C + AL G
Sbjct: 199 MPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALG 258
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+E+H ++ GF ++++G++LI++Y+ +I+ A VF ++ +N+ W +I+G +
Sbjct: 259 KEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATH 318
Query: 180 GDIVSARCLF-ELAPER---DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----- 230
G + A +F E+ +R + + + +I++ + E R+ F M + I+
Sbjct: 319 GYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEH 378
Query: 231 WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
+ M+ + G +E+ + M E N F W L+ G
Sbjct: 379 YGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNG 417
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +V G + YI +I A+ + A +F K+ +N+ WN + +G A +
Sbjct: 260 EVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHG 319
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
+ + +F +M++ PN TF +L +C + EG +V +
Sbjct: 320 YVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHY 379
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+++L S +E A ++ M E N +W +++NG
Sbjct: 380 GCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNG 417
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 313/541 (57%), Gaps = 16/541 (2%)
Query: 13 ETTKHLHQIQTQVVTSG------LEKSDYITPRI--ITACAQLKQMTYARKMFDKITDQN 64
+ H Q ++TSG L S+++ + + + A L + +AR D
Sbjct: 21 RSASHALQCHALLLTSGHLAASPLRLSNHLLLALASVPSAAALADVVFARLPLPAARDP- 79
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+WN +A R ++ F +M++ P+ +TFP VLK+C R G +H
Sbjct: 80 -FAWNTAIRLHAPAR-PRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGCRAGLLVHA 137
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD--ERNVVVWTSMINGYISCGDI 182
++ G A++F ALI Y I + KVF E R++V W SM+ GY+ CG++
Sbjct: 138 EAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEM 197
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDV--RNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
A+ +F+ P++D W T++ GY + AR+LFDQMP++D++ WN+M+ GYA
Sbjct: 198 GLAQEMFDEMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLVCWNSMIDGYAR 257
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
+G ++E + LFEEMPERNV SW+ +I G+ + G E L+ F+ ML G + P+ V
Sbjct: 258 HGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCG-LRPDRIAAVG 316
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+SACA+LGAL+ +W+H Y E +V V ALIDMY KCG ++ A+ +F SM +
Sbjct: 317 AVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERS 376
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
++TWN +I GL HG G A++LFH M+ D ++ +G+L ACTH GLV EGL F
Sbjct: 377 VVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFH 436
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M D+ I P++EHYG +VDLL RAGRL +A ++ MP+E +W +LL +CR + V
Sbjct: 437 RMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCV 496
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELAEL++ERL +L + +V+LSNIY D G W DV RI+ M D G +K G S IEV
Sbjct: 497 ELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEV 556
Query: 541 N 541
+
Sbjct: 557 D 557
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 330/582 (56%), Gaps = 45/582 (7%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQN 64
++ + ++ HL QI Q+ GL + +++ C + YA KMF I
Sbjct: 42 SYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPC 101
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
++ +N + +A+ ++ +VLF+++++ P+ FT+P V K+ + + + E+L
Sbjct: 102 LLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRG 161
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---D 181
LV K G + +V +LI++Y+ + +F EM +R+V+ W MI+GY+ C D
Sbjct: 162 LVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFED 221
Query: 182 IVSARCLFE----LAPE---------------------------RD-----VILWNTIVS 205
++ C + L P+ RD I+ N ++
Sbjct: 222 AINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGNALLD 281
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
Y + AR +F++MP K+VI W TM+SGYAN G++EE + LFE P R+V W +
Sbjct: 282 MYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAM 341
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GY F E + F+ M +V P+ +V++L+ CA+ GA++ KW+H + + N
Sbjct: 342 INGYVQFNRFDEAVALFREMQIR-KVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENR 400
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ VG ALI+MYAKCG IE A+++F + KD +W +II GLAM+G+ + AL LF
Sbjct: 401 IPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFS 460
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+MK AG PD ITFIG+L AC+H GLVEEG +F SM M+Y I P++EHYGC+VDLL RA
Sbjct: 461 KMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRA 520
Query: 446 GRLAEAVDFVKRMPIEADAV---IWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
G L EA + +K++P E A+ ++ +LL +CR+Y NVE+ E ++L + E + +
Sbjct: 521 GLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHT 580
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L+NIY RW+DV +++ M+D G KK PGCSSIEV+ ++
Sbjct: 581 LLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSII 622
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 300/525 (57%), Gaps = 45/525 (8%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNVVSWNAMFNG 74
L I Q++ +GL ++Y ++I C + YA +F+ I + N++ WN MF G
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+A + + + L+ M L +PNC+TFP +LKSC K A REG+++H VLK G+ +
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
++V T+LI +Y +E A KVF + R+VV +T++I GY S G I +A+ LF+ P
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 182
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS------------------------ 230
+DV+ WN ++SGY + N EA +LF M K +V
Sbjct: 183 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 242
Query: 231 --W-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
W N ++ Y+ G+VE LFE + ++V SWN LIGGY + L+
Sbjct: 243 HLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY--AEYNGYQGNVCVG 333
E L F+ ML G PND T++++L ACA LGA+D +W+HVY G +
Sbjct: 303 KEALLLFQEMLRSGES-PNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLL 361
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LIDMYAKCG IE A VF+SM T+ L +WN +I G AMHG+ A LF +M+ G
Sbjct: 362 TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 421
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+G+L AC+H G+++ G F+SM+ DY I P++EHYGCM+DLL G EA +
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKE 481
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
++ MP+E D VIW +LL +C+++ NVEL E + L ++EP+ P
Sbjct: 482 MIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPETP 526
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A+ VF ++ +L+ WNT+ G A+ AL L+ M + G +P+ TF +L +C
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 409 MGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
EG + + + Y + + + ++ + + GRL +A + D V +
Sbjct: 101 SKAFREGQQIHGHVLKLGYDL--DLYVHTSLISMYVQNGRLEDARKVFDQSS-HRDVVSY 157
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
L+ + Y + E A + E+ K+ ++ + + Y + G +K+ + M T
Sbjct: 158 TALI---KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 214
Query: 528 GFK 530
+
Sbjct: 215 NVR 217
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/444 (43%), Positives = 285/444 (64%), Gaps = 1/444 (0%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
T+P V+K+C + + G +H V+K+GF + ++ +LI LY+ GK + AA ++F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+R+VV W +MI+GY+ G++ R +F+ RDVI WNTI++GY V + EA++LF
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLF 120
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D+MP+++++SWN+MLSG+ G+VEE LF EMP R+V SWN ++ YA G E L
Sbjct: 121 DEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 180
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F +M G V P +AT+V++LSACA LGALD +H Y N + N VG AL+DMY
Sbjct: 181 LFDQMRAVG-VKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 239
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
AKCG I A VFN+M++KD++ WNTII+G+A+HG A LF EMK A P+ ITF+
Sbjct: 240 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFV 299
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC+H G+V+EG M+ Y I P++EHY C++DLLARAG L EA++ + MP+
Sbjct: 300 AMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPM 359
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
E + LLG CR++ N EL E+ +RL L+P + +++LSNIY +W D ++
Sbjct: 360 EPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKV 419
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVV 544
+ M+ G K+PG S IE+ +V
Sbjct: 420 RNLMKVNGISKVPGVSVIELKGMV 443
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 171/396 (43%), Gaps = 81/396 (20%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ T VV SG E YI +I A K + A+++F +D++VVSWNAM +GY +
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGE 81
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++F +M V + + N + G
Sbjct: 82 MGHTRMVFDRM--------------VCRDVISWNTIING--------------------- 106
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
Y+ I+ A ++F EM ERN+V W SM++G++ CG++ A LF P RDV+ W
Sbjct: 107 ----YAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSW 162
Query: 201 NTIVSGYIDVRNMIEARKLFDQM------PKK---------------------------- 226
N++++ Y EA LFDQM P +
Sbjct: 163 NSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIND 222
Query: 227 -----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+ I ++ YA G + ++F M ++V +WN +I G A +G E
Sbjct: 223 NRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQL 282
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALD-FSKWVHVYAEYNGYQGNVCVGNALIDMY 340
FK M E V PND T V +LSAC+ G +D K + + G + V + +ID+
Sbjct: 283 FKEM-KEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLL 341
Query: 341 AKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
A+ G++E A+++ +M + + ++ G +HG
Sbjct: 342 ARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHG 377
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+F ++ ++VVSWN+M YAQ + LF QM+ + P T +L +C + A
Sbjct: 150 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 209
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L +G LH + N N VGTAL+++Y+ I A +VF M+ ++V+ W ++I G
Sbjct: 210 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 269
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KK 226
G + A+ LF E + E + I + ++S + E +KL D M +
Sbjct: 270 MAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEP 329
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLF 275
V ++ ++ A G +EE L MP E N + L+GG +G F
Sbjct: 330 KVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 379
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 315/536 (58%), Gaps = 36/536 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSD--YITPRIITACAQLKQMTYARKMFDK-ITDQNVVSWNA 70
+ + L +IQ Q++ S + D I + I + + ++ +F+ ++ N+ ++NA
Sbjct: 36 SMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 71 MFNGYAQ-NEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLK 128
+ ++Q N +H T+ Q+ +A P+ +TF VLK+C + + EG+++HC V K
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G +N+FV +L++LY A K+F EM R+VV W ++I+GY G + AR +
Sbjct: 156 YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMV 215
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
F+ E++++ W+T++SGY V N+ EAR+LF+ MP ++V+SWN M++GYA N
Sbjct: 216 FDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEK----- 270
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+ + ++ F++M EG + PND T+V+VLSACA L
Sbjct: 271 --------------------------YADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 304
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
GALD KW+H + N + + +GNAL DMYAKCG + A VF+ M +D+I+W+ II
Sbjct: 305 GALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII 364
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
GLAM+G A + F EM G P+ I+F+G+L ACTH GLV++GL YF M Y I
Sbjct: 365 MGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGI 424
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P+IEHYGC+VDLL+RAGRL +A + MP++ + ++W LLG CR+YK+ E E +
Sbjct: 425 TPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVW 484
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
R+ EL+ + + V L+N+Y +GR D A ++ MRD K PGCS IE+N V
Sbjct: 485 RILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSV 540
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/540 (37%), Positives = 313/540 (57%), Gaps = 40/540 (7%)
Query: 13 ETTKHLHQIQTQVVTS--GLEKSDYITPRIITACAQLKQMT--YARKMFDKITDQNVVSW 68
++ K L QI ++ + + I+ R+ CAQ + YA + ++ N+ +
Sbjct: 48 KSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLY 107
Query: 69 NAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
NA+ G A N +V++ QM +P+ +T P VLK+C + A+REGEE+H +
Sbjct: 108 NAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAI 167
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G ++++V L+ +Y+ C I SAR
Sbjct: 168 KMGLASDVYVSNTLMRMYAV-------------------------------CDVIRSARK 196
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLF---DQMPKKDVISWNTMLSGYANNGDV 244
+F+ +P+RD++ W T++ GY+ + E L+ + DV N ++ Y GD
Sbjct: 197 VFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDA 256
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+++F+EMP +NV SWN +I G A G F E L F++M G V P+D T+V VL++
Sbjct: 257 NFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG-VKPDDVTLVAVLNS 315
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA LG L+ KWVH Y + N + + +GNAL+DMYAKCG I+ A VF +M+ KD+ ++
Sbjct: 316 CANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSY 375
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+I GLAMHG+G AL LF EM G PD +TF+G+L AC+H+GLVEEG YF+ M+
Sbjct: 376 TAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMST 435
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
Y++ PQ+EHYGCMVDLL RAG + EA +F++ MPIE DA + LLG+C+++ VEL E
Sbjct: 436 IYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGE 495
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++++ ++EP+ +V++SNIY RW+D +++ M++ +K PGCSSIE++ V+
Sbjct: 496 SVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVI 555
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/465 (41%), Positives = 285/465 (61%), Gaps = 11/465 (2%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLK--SCVKINALREGEELHCLVLKNGFRANIFVGT 139
R + F+ M + D+ FT+ ++K S + +R +H V+K G + FVG
Sbjct: 422 RDALAAFSAMPRRDS----FTYSFLIKALSAAGVAPVRA---VHSHVVKLGSVEDTFVGN 474
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
ALI+ YS A KVF EM ER+VV W + + + G++ R LF+ PE+D +
Sbjct: 475 ALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVS 534
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
WNTI+ GY + A +LF +MP+++V+SW+TM+SGY GD+E + +F++MP +N+
Sbjct: 535 WNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNL 594
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+W ++ A GL E F +M E V + A +V++L+ACA G+L K +H
Sbjct: 595 VTWTIMVSACAQKGLVDEAGKLFAQM-KEASVELDVAAVVSILAACAESGSLSLGKRIHR 653
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGA 378
Y + V NALIDM+ KCG + A VF++ KD ++WN+II G AMHG G
Sbjct: 654 YVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGD 713
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
AL LF +MK G PD +T I +L ACTHMG V+EG +F +M DY I+PQIEHYGCM
Sbjct: 714 KALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCM 773
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
+DLL R G + EAVD +K MP E + VIW +LL +CR++KNVE AE+A+ L++L+P N
Sbjct: 774 IDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNA 833
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
N+ +LSNIY + G+W D+A+ ++ M+ TG +K G S +E+NE
Sbjct: 834 GNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNET 878
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 82/396 (20%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + VV G + ++ +I A ++ + ARK+FD++ +++VVSWN +
Sbjct: 457 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGE 516
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V LF D MP K V N + +G
Sbjct: 517 LAGVRKLF------DEMPE--------KDTVSWNTILDG--------------------- 541
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
Y+ +EAA+++F M ERNVV W++M++GY GD+ AR +F+ P ++++ W
Sbjct: 542 ----YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTW 597
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+VS + EA KLF QM + DV + ++L+ A +G + KR+ + +
Sbjct: 598 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRK 657
Query: 257 RNV------------------------------------FSWNGLIGGYANNGLFFEVLD 280
RN+ SWN +IGG+A +G + L+
Sbjct: 658 RNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALE 717
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNALIDM 339
F +M +G P+ T++ VLSAC +G +D + E + G + +ID+
Sbjct: 718 LFAQMKQQG-FNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDL 776
Query: 340 YAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
+ G+I+ AVD+ SM + + W +++S +H
Sbjct: 777 LGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLH 812
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 301/537 (56%), Gaps = 10/537 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYAR-----KMFDKITDQNVV 66
L +H+ ++ QV+ GL + ++I + A L+++ R +
Sbjct: 114 LPRLRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPPFAPSTAL 173
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
N + YA N + +F M ++F I + + +R H V
Sbjct: 174 LANTLLRAYALNSLPHAALAVFVDMPLRQRDTFTYSFLIKALATAGVTPVRAA---HTHV 230
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
K G + FVG ALI+ YS + A KVF EM R+VV W + + + G++ +AR
Sbjct: 231 FKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAAR 290
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+F+ PE+D + WNT++ GY EA +LF +MP ++V+SW+T++S Y GD+E
Sbjct: 291 SMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEM 350
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ +F++MP +N+ +W ++ A GL E F M E + + +V++L+ACA
Sbjct: 351 ARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEM-KEAAIELDVVAVVSILAACA 409
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLITWN 365
G L K +H + + V NAL+DM+ KCG + A +F++ + KD ++WN
Sbjct: 410 ESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWN 469
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
II G AMHG G AL+LF +MK G PD +T I +L ACTHMGLVEEG +F +M D
Sbjct: 470 IIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETD 529
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I P+IEHYGCMVDLL R G + EAVD +K MP E + VIW +LL +CR++KNVE AEL
Sbjct: 530 YGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAEL 589
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
A L+ L+P N N+ +LSNIY + G+W D+A+ +V M+ TG +K G S IE++E
Sbjct: 590 AANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDE 646
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 185/446 (41%), Gaps = 66/446 (14%)
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD--ERNVVVWTSMINGYISCGDIVSARC----LF 189
+ L+ Y+ AA VF +M +R+ ++ +I + G + R +F
Sbjct: 173 LLANTLLRAYALNSLPHAALAVFVDMPLRQRDTFTYSFLIKALATAG-VTPVRAAHTHVF 231
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+L D + N ++ Y + +A+K+FD+M +DV+SWNT ++ G+V+ +
Sbjct: 232 KLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARS 291
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+EMPE++ SWN ++ GYA G E + F+RM GR
Sbjct: 292 MFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRM--PGR------------------- 330
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
NV + ++ Y K G +E A +F+ M K+L+TW ++S
Sbjct: 331 -------------------NVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVS 371
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
A G A LF EMK A D + + IL AC G + G +
Sbjct: 372 ACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALG-KRIHRHVRQRKLG 430
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
++D+ + G + A +E D+V W ++G ++ + E AL
Sbjct: 431 RSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGH---GEKALNL 487
Query: 490 LTELEPKN-PANFVMLSNIYG---DLGRWKDVARIKVAMR-DTGFKKLPGCSSIEVNEVV 544
T+++ + + V L N+ +G ++ R M D G K E+
Sbjct: 488 FTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKP----------EIE 537
Query: 545 MLGCLSRELDRKSIVRAEANMIKLLP 570
GC+ L R +++ +MIK +P
Sbjct: 538 HYGCMVDLLGRGGLIKEAVDMIKSMP 563
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/465 (41%), Positives = 285/465 (61%), Gaps = 11/465 (2%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLK--SCVKINALREGEELHCLVLKNGFRANIFVGT 139
R + F+ M + D+ FT+ ++K S + +R +H V+K G + FVG
Sbjct: 115 RDALAAFSAMPRRDS----FTYSFLIKALSAAGVAPVRA---VHSHVVKLGSVEDTFVGN 167
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
ALI+ YS A KVF EM ER+VV W + + + G++ R LF+ PE+D +
Sbjct: 168 ALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVS 227
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
WNTI+ GY + A +LF +MP+++V+SW+TM+SGY GD+E + +F++MP +N+
Sbjct: 228 WNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNL 287
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+W ++ A GL E F +M E V + A +V++L+ACA G+L K +H
Sbjct: 288 VTWTIMVSACAQKGLVDEAGKLFAQM-KEASVELDVAAVVSILAACAESGSLSLGKRIHR 346
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGA 378
Y + V NALIDM+ KCG + A VF++ KD ++WN+II G AMHG G
Sbjct: 347 YVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGD 406
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
AL LF +MK G PD +T I +L ACTHMG V+EG +F +M DY I+PQIEHYGCM
Sbjct: 407 KALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCM 466
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
+DLL R G + EAVD +K MP E + VIW +LL +CR++KNVE AE+A+ L++L+P N
Sbjct: 467 IDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNA 526
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
N+ +LSNIY + G+W D+A+ ++ M+ TG +K G S +E+NE
Sbjct: 527 GNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNET 571
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 175/399 (43%), Gaps = 82/399 (20%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
+ + + VV G + ++ +I A ++ + ARK+FD++ +++VVSWN +
Sbjct: 147 VRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR 206
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
V LF +M + D V N + +G
Sbjct: 207 EGELAGVRKLFDEMPEKDT--------------VSWNTILDG------------------ 234
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
Y+ +EAA+++F M ERNVV W++M++GY GD+ AR +F+ P +++
Sbjct: 235 -------YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNL 287
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEE 253
+ W +VS + EA KLF QM + DV + ++L+ A +G + KR+
Sbjct: 288 VTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRY 347
Query: 254 MPERNV------------------------------------FSWNGLIGGYANNGLFFE 277
+ +RN+ SWN +IGG+A +G +
Sbjct: 348 VRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDK 407
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNAL 336
L+ F +M +G P+ T++ VLSAC +G +D + E + G + +
Sbjct: 408 ALELFAQMKQQG-FNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCM 466
Query: 337 IDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
ID+ + G+I+ AVD+ SM + + W +++S +H
Sbjct: 467 IDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLH 505
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/596 (35%), Positives = 327/596 (54%), Gaps = 66/596 (11%)
Query: 13 ETTKHLHQIQTQV-VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+T K L I ++ + S + S+++ +++ ++ YA K+FD+IT N W ++
Sbjct: 13 KTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSL 72
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY +N + LF QM++ FT VLK+ ++ + G+ ++ VLK GF
Sbjct: 73 IHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGF 132
Query: 132 RANIFVGTALIEL-------------------------------YSTGKAIEAAYKVFGE 160
++ V ++++L Y ++ A K F
Sbjct: 133 AFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDR 192
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR--- 217
M ERNVV WTSMI GY+ GD+ A+ LF+ P +D+ WN +VSGY+D+ + + AR
Sbjct: 193 MPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIF 252
Query: 218 ----------------------------KLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
FD+MP K+VISW ML GY NGD +
Sbjct: 253 GKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARC 312
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF++MP +N+ +W+ +IGGYA NG + L+ F+R E + P++ I+ ++SAC++LG
Sbjct: 313 LFDQMPMKNLVTWSTMIGGYARNGQPLKALELFER-FKEQDIKPDETFILGIISACSQLG 371
Query: 310 ALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+D ++ +H Y ++ V +LIDMYAKCG IE A+ +F KDL+ ++T+I
Sbjct: 372 IIDAAESIIHNYVG-PSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMI 430
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ LA HG G A+ LF +M+ A PD +TF+G+L AC H GLV+EG YF+ M ++ I
Sbjct: 431 AALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGI 490
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P +HY C+VDLL R G L EA + ++ MPI +V+W LL +CRV+ NV+LAE+A
Sbjct: 491 QPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAA 550
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++EP N N+++LSNIY GRW VA+++ +R+ +K G S IE++ VV
Sbjct: 551 ELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVV 606
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/570 (37%), Positives = 320/570 (56%), Gaps = 47/570 (8%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+HQI Q + GL ++ P++I L + YAR + D+ SWN++ Y
Sbjct: 14 QIHQIHAQTLIHGLPLQTHLIPKLI----DLHSIDYARFVLDQTPSPTDFSWNSLIRAYT 69
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + + L+ +M + P+ FTFP VLK+C + ++ EGE++H VL+ GF +++F
Sbjct: 70 VHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLF 129
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP-ER 195
V +LI++Y +++A + +M R+ V W S+I+GY+ G + AR LFE P R
Sbjct: 130 VCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRR 189
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM--------PKK--------------------- 226
+V+ W +++GY + +E LF QM P
Sbjct: 190 NVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRF 249
Query: 227 -----DV--ISWNTML-----SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
DV I NT+L Y+ GDVE+ R+F+ + +N+ SWN +I G GL
Sbjct: 250 LSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGL 309
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E +D ++ M + V PN+ T+V VLSACA LGAL+ + VH+Y NG NV +
Sbjct: 310 LEEAIDLYRHMKAQS-VKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILAT 368
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
AL+DMYAKCG I++A +F KD+ WN +I GLA HG G +L++F +M AG P
Sbjct: 369 ALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQP 428
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
+ +TFIG+L AC H GLVEEG F SMA + + P++EHY CMVDLL RAG L EA +
Sbjct: 429 NDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYEL 488
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
V+ M I D++IW LL +CR+++N+ELA+ E + + N ++LSNIY GRW
Sbjct: 489 VQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRW 548
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
KDVAR++ +++ KK GCS +EV+ VV
Sbjct: 549 KDVARVRRQVKEKRIKKPSGCSWVEVDGVV 578
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 322/531 (60%), Gaps = 3/531 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRII-TACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+T+ + QI Q++T+ L + R++ + ++ + YA +F +I N N M
Sbjct: 22 KTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTM 81
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
Y ++ + + +M+K + + +T+P VLK+C + L EG + +K GF
Sbjct: 82 VKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGF 141
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++FV LI +Y A VF E+++V W SM+ GY+ CG++ +A+ +F+
Sbjct: 142 GGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDE 201
Query: 192 APERDVILWNTIVSGYIDVRNMI-EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
PERDV+ W+ ++ GY + AR FD MP +D++SWN+M+ GYA G++E + +
Sbjct: 202 MPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREI 261
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F++M ++NV SW+ +I GYA + E L+ F++ML +G + P+ ++V +SAC++LGA
Sbjct: 262 FBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQG-IKPDRVSVVGAVSACSQLGA 320
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
LD +W+H+Y + N ++ V AL+DMY KCG + A +FNSM +++++WN +I G
Sbjct: 321 LDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVG 380
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
L M+G G AL F +M+ D + F+G+L AC+H LV EGL F M Y + P
Sbjct: 381 LGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEP 440
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHYGC+VDLL RAG+L + + ++ MP++ +A +W +LL +CR+++NV LAE+ +ERL
Sbjct: 441 KLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERL 500
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+ + +V++SNIY D+G W+ + RI+ M++ KK G S IEV+
Sbjct: 501 AELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVD 551
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 306/568 (53%), Gaps = 43/568 (7%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H ++T S +T I++C+ L YA+ +F++I N+ WN + GYA
Sbjct: 92 HAHMLRTSRFCDPYTASKLLTAYAISSCSCL---IYAKNVFNQIPQPNLYCWNTLIRGYA 148
Query: 77 QNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ ++F M PN FTFP + K+ ++ L G LH +V+K +++
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
F+ +LI Y + A + A++VF M ++VV W +MIN + G A LF+ +
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 196 DV---------------------------------------ILWNTIVSGYIDVRNMIEA 216
DV IL N ++ Y+ + +A
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDA 328
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
+ LF++M +KD++SW TML G+A G+ +E +F+ MP + +WN LI Y NG
Sbjct: 329 KDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPR 388
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
L F M P++ T++ L A A+LGA+DF W+HVY + + N + +L
Sbjct: 389 VALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSL 448
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMYAKCG + A++VF++++ KD+ W+ +I LAM+G+G AL LF M A P+
Sbjct: 449 LDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNA 508
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
+TF ILCAC H GLV EG F+ M Y IVPQI+HY C+VD+ RAG L +A F++
Sbjct: 509 VTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIE 568
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
+MPI A +W LLG+C + NVELAELA + L ELEP N FV+LSNIY G W+
Sbjct: 569 KMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEK 628
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVNEVV 544
V+ ++ MRD+ KK P CSSI+VN +V
Sbjct: 629 VSNLRKLMRDSDVKKEPWCSSIDVNGIV 656
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 24/320 (7%)
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID-VRNMIEARKLFDQMP 224
V V S ++ +S G I + C + E+ + +T + +ID N ++ +++ M
Sbjct: 38 VSVKCSALSTPLSLGQI-AMNCTEAVKGEKGNEVESTNILEFIDQCTNTMQLKQIHAHML 96
Query: 225 KK----DVISWNTMLSGYANNGDVEEC------KRLFEEMPERNVFSWNGLIGGYANNGL 274
+ D + + +L+ YA + C K +F ++P+ N++ WN LI GYA++
Sbjct: 97 RTSRFCDPYTASKLLTAYA----ISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSD 152
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ F ML FPN T + A +RL L +H ++ + N
Sbjct: 153 PTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILN 212
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
+LI+ Y G + A VF +M KD+++WN +I+ A+ G AL LF EM+ P
Sbjct: 213 SLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKP 272
Query: 395 DGITFIGILCACTHMGLVEEG---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+ IT + +L AC +E G SY ++ ++ M+D+ + G + +A
Sbjct: 273 NVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN----NAMLDMYVKCGCINDA 328
Query: 452 VDFVKRMPIEADAVIWANLL 471
D +M E D V W +L
Sbjct: 329 KDLFNKMS-EKDIVSWTTML 347
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S QL H I + + + ++ ++ A+ + A ++F + ++V W
Sbjct: 417 SAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVW 476
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+AM A + + LF+ M + PN TF +L +C + EGE+L
Sbjct: 477 SAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQL 530
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 315/538 (58%), Gaps = 36/538 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVV 66
S+ + + ++L Q+ V+ SG + Y++ ++ A +A K+F I + NV
Sbjct: 40 SKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVF 99
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + G +N + + +M +DA PN FT+P + K+C A++EG ++H V
Sbjct: 100 IWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHV 158
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K+G +++ + +A I +Y++ +E A K+F
Sbjct: 159 VKHGIGSDVHIKSAGIHMYASFGRLEDARKMF---------------------------- 190
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+ E DV+ WNT++ GY+ + A+ LF QMP K++ SWN M++G A G++ +
Sbjct: 191 ----YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGD 246
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
++LF+EM ER+ SW+ ++ GY + G + E L+ F++M E P + +VL+AC+
Sbjct: 247 ARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQRE-ETRPGRFILSSVLAACS 305
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+GA+D +WVH Y + N + + +G AL+DMYAKCG ++ +VF M +++ TWN
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I GLA+HGR AL LF +++ P+GIT +G+L AC H G V++GL FQ+M Y
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ P++EHYGCMVDLL R+G +EA D + MP++ +A +W LLG+CR++ N +LAE
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L ELEP+N +V+LSNIY +GR+ DV++I+ M+D G K +PG S +++N V
Sbjct: 486 GKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTV 543
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 324/534 (60%), Gaps = 3/534 (0%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRII-TACAQLKQMTYARKMFDKITDQNVVSW 68
++ +T+ + QI Q++T+ L + R++ + ++ + YA +F +I N
Sbjct: 19 QKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFIC 78
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N M Y ++ + + +M++ + + +T+P VLK+C + L EG + +K
Sbjct: 79 NTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVK 138
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GF ++FV LI +Y A VF E+++V W SM+ GY+ CG++ +A+ +
Sbjct: 139 RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNM 198
Query: 189 FELAPERDVILWNTIVSGYIDVRNMI-EARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
F+ PERDV+ W+ ++ GY + AR FD MP +D++SWN+M+ GYA G++E
Sbjct: 199 FDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVA 258
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F++M ++NV SW+ +I GYA + E L+ F++ML +G + P+ ++V +SAC++
Sbjct: 259 REIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQG-IKPDRVSVVGAVSACSQ 317
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGALD +W+H+Y + N ++ V AL+DMY KCG + A +FNSM +++++WN +
Sbjct: 318 LGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVM 377
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I GL M+G G AL F +M+ D + F+G+L AC+H LV EGL F M Y
Sbjct: 378 IVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYR 437
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P++EHYGC+VDLL RAG+L + + ++ MP++ +A +W +LL +CR+++NV LAE+ +
Sbjct: 438 LEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVV 497
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ERL EL+ + +V++SNIY D+G W+ + RI+ M++ KK G S IEV+
Sbjct: 498 ERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVD 551
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/565 (36%), Positives = 323/565 (57%), Gaps = 43/565 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV GLE+ +I +I A+ M + K+F+ ++++NVVSW ++ GYA+ +
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V LF +M + P+ T V+ +C K+ L GE + + + G + N +
Sbjct: 212 RPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN 271
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
AL+++Y AI+AA ++F E +RN+V++ ++++ Y G A + + P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331
Query: 194 ERDVIL-------------WNTIVSGYIDVRNMIE---------------------ARKL 219
+R +L + + GY+ +RN +E A ++
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYV-IRNGLEGWDSIGNVIIDMYMKCGKPEMACRV 390
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD M K V+SWN++ +G+ NGDVE +F ++PERN WN +I G LF + +
Sbjct: 391 FDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAI 450
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ F+ M EG + + T++ + SAC LGA + +KWVH Y E NG ++ + AL+DM
Sbjct: 451 ELFREMQGEG-IKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDM 509
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
+A+CG ++A+ VFN M +D+ W I +AM G G GA LF++M G PD + F
Sbjct: 510 FARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLF 569
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ +L AC+H G VE+GL F S+ D+ I PQIEHYGCMVDLL RAG L EA D +K MP
Sbjct: 570 VQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP 628
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+E + V+W +LL +CRV+KNVE+A A ER+ EL P+ V+LSNIY G+W DVAR
Sbjct: 629 MEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVAR 688
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
+++ +R+ G +K+PG SS++VN V+
Sbjct: 689 VRLNLREKGVRKVPGSSSVQVNGVI 713
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 274/607 (45%), Gaps = 63/607 (10%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMF-----DKITDQN 64
+T L Q+ Q+ +GL++ +++ A A++ + + YARK F D +D
Sbjct: 36 KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDA 95
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+ N++ GY+ R ++L+ +M L PN +TFP VL C KI A EG ++H
Sbjct: 96 LFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K G ++F+ LI Y+ ++ +KVF M ERNVV WTS+I GY
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215
Query: 185 ARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLS 236
A LF E + ++S +R++ ++ + K + + N ++
Sbjct: 216 AVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVD 275
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y G ++ KRLF+E +RN+ +N ++ YA GL E L ML +G P+
Sbjct: 276 MYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGP-RPDRV 334
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI----------- 345
T+++ +SA A+L L + K H Y NG +G +GN +IDMY KCG
Sbjct: 335 TMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLM 394
Query: 346 --------------------IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+E+A +VFN + ++ + WNT+ISGL A+ LF
Sbjct: 395 SNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFR 454
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP-QIEHYGCMVDLLAR 444
EM+ G D +T +GI AC ++G E L+ + ++ + +P + +VD+ AR
Sbjct: 455 EMQGEGIKADRVTMMGIASACGYLGAPE--LAKWVHTYIEKNGIPCDMRLNTALVDMFAR 512
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE-LALERLTELEPKNPANFVM 503
G A+ +M E D W +G+ + N E A L + L + + FV
Sbjct: 513 CGDPQSAMQVFNKM-TERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 571
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEA 563
+ G+ + I M D G ++ GC+ L R ++R
Sbjct: 572 VLTACSHGGQVEQGLHIFSLMEDHGISP----------QIEHYGCMVDLLGRAGLLREAF 621
Query: 564 NMIKLLP 570
++IK +P
Sbjct: 622 DLIKSMP 628
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 317/580 (54%), Gaps = 46/580 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ------MTYARKMFDKITDQ 63
Q + +HL QI +V G + ++I + L + +AR++FD+I +
Sbjct: 18 RQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEP 77
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ +N + Y+ ++ + + L + + +PN FT P VLK+C + A+ H
Sbjct: 78 DRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAH 137
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+V+K GF IFV AL+ +++ ++ + + FGEM +RNVV W +MI GY G++
Sbjct: 138 GVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVS 197
Query: 184 SARCLFELAPER---------------------------------------DVILWNTIV 204
A LF + D IL N ++
Sbjct: 198 EACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALL 257
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
Y ++ A + FD MP K+V++W +ML A +G V+ + FE+MPERN+ SWN
Sbjct: 258 DMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNA 317
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I Y G E LD + RM + G + P++ T+ VLSAC + G L K +H Y N
Sbjct: 318 MISCYVQCGRLHETLDLYNRMRSLG-ITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDN 376
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
V + N+L+DMYA+CG ++ A+ +F M K++I+WN II LAMHGR ++ F
Sbjct: 377 FNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFF 436
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
M + PD ITF+G+L AC+H GL+E G YF++MA Y++ P++EHYGCMVDLL R
Sbjct: 437 RTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGR 496
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
G LA+AV+ +K M I+ D V+W LLG+CR++ NVE+ +L +++L ELE FV++
Sbjct: 497 RGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLI 556
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N++ + +W+D+ +++ M++ G KK G SSIEV ++
Sbjct: 557 CNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNII 596
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/607 (35%), Positives = 329/607 (54%), Gaps = 48/607 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
+Q + K L QI Q++ + Y + TA A + YARK+FD+I N+ S
Sbjct: 147 QQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYS 206
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + A + V++F +M PN FTFP+++K+ + G+ +H +
Sbjct: 207 WNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMA 266
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMINGYISCGDIVS 184
+K F ++FV +LI Y++ ++ AY VF E + +++V W SM+ G++ G
Sbjct: 267 IKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDK 326
Query: 185 ARCLFELAPERDV-------------------ILWNTIVSGYIDVRNMIE---------- 215
A LFE V + V YID M+
Sbjct: 327 ALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATID 386
Query: 216 ----------ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
AR LFD M K+DV+SW T++ GYA + + +F+ MP +++ +WN L
Sbjct: 387 MFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVL 446
Query: 266 IGGYANNGLFFEVLDAFKRM-LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
I GY +G E L F+ + LT+ P+ T+++ LSACA+LGA+D +W+H Y +
Sbjct: 447 ISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE 506
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
Q N + +LIDMY+K G +E A++VF+S+ KD+ W+ +I+GLAMHGRG A+ LF
Sbjct: 507 RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+M+ P+ +TF +LCAC+H GLV+EG F M Y +VP+ +HY CMVD+L R
Sbjct: 567 LDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGR 626
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG L EA+ F++ MP+ A +W LLG+C ++ N+ELAE A RL E+EP N +V+L
Sbjct: 627 AGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLL 686
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV---MLGCLSRELDRKSIVRA 561
SN+Y G W+ V+ ++ MRD+G KK GCSSIE++ V ++G + L R +
Sbjct: 687 SNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKL 746
Query: 562 EANMIKL 568
+ M +L
Sbjct: 747 DEIMARL 753
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 316/538 (58%), Gaps = 36/538 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVV 66
S+ + + ++L Q+ V+ SG + Y++ ++ A +A K+F I + NV
Sbjct: 40 SKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVF 99
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + G +N + + +M +DA PN FT+P + K+C A++EG ++H V
Sbjct: 100 IWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHV 158
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K+G +++ + +A I++Y++ +E A K+F
Sbjct: 159 VKHGIGSDVHIKSAGIQMYASFGRLEDARKMF---------------------------- 190
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+ E DV+ WNT++ GY+ + A+ LF QMP K++ SWN M++G A G++ +
Sbjct: 191 ----YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGD 246
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
++LF+EM ER+ SW+ ++ GY + G + E L+ F++M E P + +VL+AC+
Sbjct: 247 ARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQRE-ETRPGRFILSSVLAACS 305
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+GA+D +WVH Y + N + + +G AL+DMYAKCG ++ +VF M +++ TWN
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I GLA+HGR AL LF +++ P+GIT +G+L AC H G V++GL FQ+M Y
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ P++EHYGCMVDLL R+G +EA D + MP++ +A +W LLG+CR++ N +LAE
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L ELEP+N +V+LSNIY +GR+ DV++I+ M++ G K +PG S +++N V
Sbjct: 486 GKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTV 543
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 304/507 (59%), Gaps = 9/507 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ + + ++ ARK FD + ++NVVSW AM GY Q LF QM + N
Sbjct: 84 LISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPE----KN 139
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++L +++ + E L ++ ++ T +I Y + A ++F
Sbjct: 140 VVSWTVMLGGLIQVRRIDEARGLFDIMPVK----DVVARTNMISGYCQEGRLAEARELFD 195
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
EM RNV+ WT+MI+GY+ G + AR LFE+ PE++ + W ++ GY + EA +L
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASEL 255
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD MP K V++ N M+ G+ NG+V + +++F+++ E++ +W+ +I Y G E L
Sbjct: 256 FDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEAL 315
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ F M EG V N ++++VLS CA L +LD + VH + + +V V + LI M
Sbjct: 316 NLFALMQREG-VQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITM 374
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG + A +F+ KD++ WN+II+G A HG AL +FHEM ++G DG+TF
Sbjct: 375 YVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTF 434
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC++ G V+EGL F+SM Y + P+ EHY CMVDLL RAG + +A+D +++MP
Sbjct: 435 VGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMP 494
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+EADA+IW LLG+CR + N+ LAE+A ++L +LEPKN +++LSNIY GRW DVA
Sbjct: 495 VEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAE 554
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVVML 546
++ MR K PGCS IEV + V +
Sbjct: 555 LRRNMRVKKVSKSPGCSWIEVEKRVHM 581
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 55/355 (15%)
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
I Y+ IE+A +VF EM ++ +V W SM+ GY AR LF+ PER+ + WN
Sbjct: 23 IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWN 82
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++SGY+ R + EARK FD MP+++V+SW M+ GY G V E + LF +MPE+NV S
Sbjct: 83 GLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVS 142
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
W ++GG +V R + E R G D V A
Sbjct: 143 WTVMLGG------LIQV-----RRIDEAR------------------GLFDIMPVKDVVA 173
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
N +I Y + G + A ++F+ M +++I+W T+ISG +G+ A
Sbjct: 174 RTN-----------MISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVAR 222
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M E +++ +L T G +EE F +M V + M+
Sbjct: 223 KLFEVMPEKNE----VSWTAMLMGYTQGGRIEEASELFDAMP-----VKAVVACNAMILG 273
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY--KNVELAELALERLTELE 494
+ G +A+A ++ E D W+ ++ +VY K E+ L L L + E
Sbjct: 274 FGQNGEVAKARQVFDQIR-EKDDGTWSAMI---KVYERKGFEVEALNLFALMQRE 324
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 116/279 (41%), Gaps = 41/279 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN------------ 78
EK++ ++ Q ++ A ++FD + + VV+ NAM G+ QN
Sbjct: 230 EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQ 289
Query: 79 -------------------EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
F + LF M++ N + VL C + +L G
Sbjct: 290 IREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG 349
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
++H ++K+ F +++FV + LI +Y + A ++F +++V+W S+I GY
Sbjct: 350 RQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQH 409
Query: 180 GDIVSARCLF-ELAPE---RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT-- 233
G + A +F E+ D + + ++S + E ++F+ M K ++ T
Sbjct: 410 GLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEH 469
Query: 234 ---MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
M+ G V + L ++MP E + W L+G
Sbjct: 470 YACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 37/245 (15%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ ++V S + ++ +IT + + AR++FD+ + +++V WN++
Sbjct: 343 LASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSI 402
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYAQ+ + +F +M + TF VL +C ++EG E+
Sbjct: 403 ITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIF-------- 454
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++++ Y V E + M++ G + A L +
Sbjct: 455 -----------------ESMKSKYLV-----EPKTEHYACMVDLLGRAGLVNDAMDLIQK 492
Query: 192 AP-ERDVILWNTIVSGYIDVRNM----IEARKLFDQMPKK--DVISWNTMLSGYANNGDV 244
P E D I+W ++ NM + A+KL PK I + + + GDV
Sbjct: 493 MPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDV 552
Query: 245 EECKR 249
E +R
Sbjct: 553 AELRR 557
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/528 (36%), Positives = 299/528 (56%), Gaps = 72/528 (13%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
V+ L +S+++ ++I C + + M YA +F ++ D N +NAM N +
Sbjct: 11 VIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLT 70
Query: 85 VVLFTQMKKLDA---------MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + QM + +P+ FTFP V+K+C ++
Sbjct: 71 IDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLG--------------------- 109
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
L++ GK + A + FG+ + +++ ++I+ Y C
Sbjct: 110 --------LHNLGKQVHAQFFKFGK--KSHLITENALIDMYTKCD--------------- 144
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
N+++A LFD+M ++ ISWN ++SG+ G + + LF+EMP
Sbjct: 145 ----------------NLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMP 188
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
R + SW +I GY G + + LD F+ M G + P++A+I++VL ACA+LGAL+ K
Sbjct: 189 NRTIVSWTAIISGYTRIGSYIDALDVFREMQIAG-IEPDEASIISVLPACAKLGALETGK 247
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
W+H++ NG C+ NALI+MY KCG I+ A +F+ M +D+I+W+T+I GLA HG
Sbjct: 248 WIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHG 307
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
+ A+++F MK P+GITF+G+L AC H G EEGL YF +M D+ I P+IEHY
Sbjct: 308 KVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHY 367
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
G +VDLL RAGRL++A+D V++MP++ D+ IW +LL SCR + N+E+A +A+E L ELEP
Sbjct: 368 GSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEP 427
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ N+V+LSNIY DLG+W DV+R++ +R KK PGCS IEVN V
Sbjct: 428 DDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNV 475
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 69/323 (21%)
Query: 20 QIQTQVVTSGLEKSDYITPR-IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ Q G +KS IT +I + + A +FD++ ++ +SWN + +G+ +
Sbjct: 116 QVHAQFFKFG-KKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRL 174
Query: 79 EFHRTVVVLFTQMKK-------------------LDAM------------PNCFTFPIVL 107
R LF +M +DA+ P+ + VL
Sbjct: 175 GQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVL 234
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+C K+ AL G+ +H +NG + ALIE+Y+ I+ A ++F +M R+V+
Sbjct: 235 PACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVI 294
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
W++MI G + G + A +FE + ++ K +
Sbjct: 295 SWSTMIGGLANHGKVREAIAIFERMKQTNI---------------------------KPN 327
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYANNGLFFEVLDAF 282
I++ +LS A+ G EE F+ M E + + L+ G + LD
Sbjct: 328 GITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIV 387
Query: 283 KRMLTEGRVFPNDATIVTVLSAC 305
++M + P+ ++LS+C
Sbjct: 388 EKMPMK----PDSKIWGSLLSSC 406
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 298/528 (56%), Gaps = 68/528 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H ++T S L S R+ + CA +YA+ +F + V WN +A
Sbjct: 35 HAHLLKTNSPLSSLPLS-----RVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + + LF ++++ D P+ +T VLK+C ++ +R G+
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGK---------------- 133
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
+++GY+ +L + +
Sbjct: 134 -----------------------------------IVHGYVE-----------KLGLQSN 147
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ L N IV Y + ARK+FD+MP++DVI+WN M++ GD E +LF EMPE
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RNV SW +IGGYA G E +D F M G + PN+ T+V VL ACA +G L +
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAG-LLPNEVTVVAVLVACADMGNLVLGRR 266
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H ++ +GY+ N+ V N LIDMY KCG +E+A +F++M+ + +++W+ +I+GLA HGR
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGR 326
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
AL+LF++M N G P+ +TFIGIL AC+HMG+VE+G YF SM DY IVP+IEHYG
Sbjct: 327 AEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYG 386
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CMVDL +RAG L EA +F+ MPI + V+W LLG C+V+KN++LAE A L++L+P
Sbjct: 387 CMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPL 446
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N +V+LSNIY + GRW+DVAR++ MRD G KK PG SSI V VV
Sbjct: 447 NDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVV 494
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/389 (46%), Positives = 258/389 (66%), Gaps = 1/389 (0%)
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
++F MDER+VV W SMI G + G++ A LF+ P +D + WNTI+ GY+ M +
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNK 61
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
A LF+ MP+++V+SW+TM+SGY GD+E + LF+ MP +N+ SW ++ GYA GL
Sbjct: 62 AFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLA 121
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+ + +F++M E + P+D T++++L++CA G L K VH E Y+ +V V NA
Sbjct: 122 KDAIRSFEQM-EEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNA 180
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+DMYAKCG ++ A+ VFN M KDL++WN ++ GLAMHG G AL LF M+ G PD
Sbjct: 181 LVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPD 240
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
+T + +LCAC H G V+EG+ YF +M DY IVP IEHYGCMVDLL R GRL EA V
Sbjct: 241 KVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLV 300
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+ MP+E + VIW LLG+CR++ V LAE L+ L +LEP +P N+ +LSNI+ G W
Sbjct: 301 QSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWS 360
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
VA +++ M++ G +K G SSIEV++ V
Sbjct: 361 SVANVRLQMKNFGIQKPSGASSIEVDDEV 389
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 150/361 (41%), Gaps = 81/361 (22%)
Query: 55 KMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
++F + +++VVSWN+M G + V L K D MP +K V N
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLK------VGELSEACKLFDEMP--------MKDAVSWN 47
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ +G Y + A+ +F M ERNVV W++M++
Sbjct: 48 TILDG-------------------------YVKAGEMNKAFGLFESMPERNVVSWSTMVS 82
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKD--- 227
GY GD+ AR LF+ P ++++ W IVSGY +A + F+QM K D
Sbjct: 83 GYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGT 142
Query: 228 VIS--------------------------------WNTMLSGYANNGDVEECKRLFEEMP 255
VIS N ++ YA G V+ +F M
Sbjct: 143 VISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMS 202
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS- 314
++++ SWN ++ G A +G + L F M EG P+ T+V VL AC G +D
Sbjct: 203 KKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEG-FRPDKVTLVAVLCACVHAGFVDEGI 261
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAM 373
++ + G ++ ++D+ + G ++ A + SM + +++ W T++ M
Sbjct: 262 RYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRM 321
Query: 374 H 374
H
Sbjct: 322 H 322
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ + M AR +FD++ +N+VSW + +GYA + + F QM++ P+
Sbjct: 80 MVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPD 139
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T +L SC + L G+ +H + + ++ ++ V AL+++Y+ ++ A VF
Sbjct: 140 DGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFN 199
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD---------VILWNTIVSGYIDV 210
M ++++V W M+ G G A LF + + +L + +G++D
Sbjct: 200 GMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVD- 258
Query: 211 RNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNG 264
E + F+ M + + + M+ G ++E RL + MP E NV W
Sbjct: 259 ----EGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGT 314
Query: 265 LIGG---YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
L+G + GL EVLD ++ P+D ++LS
Sbjct: 315 LLGACRMHNAVGLAEEVLDCLFKLE------PSDPGNYSLLS 350
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 36 ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
++ ++ A+ Q+ A +F+ ++ +++VSWN M G A + + LF+ M++
Sbjct: 177 VSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEG 236
Query: 96 AMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
P+ T VL +CV + EG + + G +I +++L G ++ A
Sbjct: 237 FRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEA 296
Query: 155 YKVFGEMD-ERNVVVWTSMINGYISCGDIVSAR----CLFELAP 193
Y++ M E NVV+W +++ + A CLF+L P
Sbjct: 297 YRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEP 340
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 280/441 (63%), Gaps = 3/441 (0%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
PN +TFP+++K C +I ++ +GE++H +LK GF ++FV +LI +YS I A +
Sbjct: 8 PNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAM 67
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F ++V W SMI+GY+ G+I +AR LFE PERD+ WN++++GY+ +M A
Sbjct: 68 FEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAE 127
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
LF++MP +D++SWN M+ GYA ++E LF MP RNV SWN ++ Y + E
Sbjct: 128 DLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDE 187
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY-QGNVCVGNAL 336
L F +M+ G PN+AT+V+VL+ACA LG LD KW+H Y + N + +V + AL
Sbjct: 188 CLRMFDKMM--GETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTAL 245
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+ MYAKCG ++ A DVF+ M + +++WN++I G MHG+ AL +F +M+ G MP+
Sbjct: 246 LTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPND 305
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
TFI +L AC H G++ EG YF M Y I P++EHYGCMVDLL RAG + + + ++
Sbjct: 306 ATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIR 365
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
+MP+E +W LL +CR + N ELAE+ +RL ELEP++ +++LSNIY G+W D
Sbjct: 366 KMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDD 425
Query: 517 VARIKVAMRDTGFKKLPGCSS 537
V ++ M++ G K G SS
Sbjct: 426 VEIVRKMMKERGLTKTTGLSS 446
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 166/398 (41%), Gaps = 83/398 (20%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+I +++ G E ++ +I + ++ AR MF+ + ++V+WN+M +GY +N
Sbjct: 30 EKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKN 89
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
LF +M + D +F
Sbjct: 90 GEIGAARELFEEMPERD---------------------------------------LFSW 110
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
++I Y + AA +F +M R++V W MI+GY ++ A LF P R+V+
Sbjct: 111 NSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVV 170
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQ-----MPKK--------------------------- 226
WN +++ Y+ +++ E ++FD+ MP +
Sbjct: 171 SWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIK 230
Query: 227 -------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
DV+ +L+ YA G ++ + +F++M R+V SWN +I GY +G + L
Sbjct: 231 NNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKAL 290
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALI 337
+ F M G + PNDAT + VLSACA G + W + Y+ V + ++
Sbjct: 291 EMFLDMEKRGPM-PNDATFICVLSACAHSGMI-LEGWWYFDLMRRAYKIEPKVEHYGCMV 348
Query: 338 DMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
D+ + G++++ ++ M + W ++S H
Sbjct: 349 DLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTH 386
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 12/224 (5%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
V PN T ++ C +G++ + +H G++ ++ V N+LI MY+ CG I +A
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
+F DL+TWN++I G +G A LF EM D ++ ++ G
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPER----DLFSWNSMIAGYVGNG 121
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
+ F M I + CM+D A+ + A + MP + V W +
Sbjct: 122 DMTAAEDLFNKMPFR-----DIVSWNCMIDGYAQVQNMEIACELFNWMPYR-NVVSWNIM 175
Query: 471 LG-SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
L R+ E + + + E P N A V + LGR
Sbjct: 176 LALYVRIKDYDECLRMFDKMMGETMP-NEATLVSVLTACAHLGR 218
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 4 TTGAHSEQLETTKHLHQ-IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD 62
T AH +L+ K +H I+ V +E ++ ++T A+ M AR +FDK+++
Sbjct: 211 TACAHLGRLDRGKWIHSYIKNNRV---IEPDVLLSTALLTMYAKCGAMDLARDVFDKMSN 267
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
++VVSWN+M GY + + +F M+K MPN TF VL +C + EG
Sbjct: 268 RSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEG 324
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 323/607 (53%), Gaps = 83/607 (13%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT-YARKMFDKITDQN 64
G+ + ++ HL Q+ Q++ + L +Y +I C +L+ Y +F+ + N
Sbjct: 5 GSIASRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPN 64
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V + +M Y+ + H VV+++ QM+ P+ F +PI++KS A G H
Sbjct: 65 VFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS-----AGTGGIGFHA 119
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE------------------------ 160
VLK G ++ FV A+I++Y+ I A KVF E
Sbjct: 120 HVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESE 179
Query: 161 ---------MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
M ERNV+ WT+M+ GY D+ +AR F+ PER V+ WN ++SGY
Sbjct: 180 GQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNG 239
Query: 212 NMIEARKLFDQMP----KKDVISWNTMLSG------------------------------ 237
EA +LFD+M + D +W T++S
Sbjct: 240 LAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRT 299
Query: 238 -----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
YA GD++ ++LF MP RNV +WN +I GYA NG ++ FK M+T ++
Sbjct: 300 ALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLT 359
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P++ T+V+V+SAC LGAL+ WV + N + ++ NA+I MY++CG +E+A V
Sbjct: 360 PDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRV 419
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M T+D++++NT+ISG A HG G A++L MK G PD +TFIG+L AC+H GL+
Sbjct: 420 FQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLL 479
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
EEG F+S+ P I+HY CMVDLL R G L +A ++RMP+E A ++ +LL
Sbjct: 480 EEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLN 534
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+ R++K VEL ELA +L ELEP N NF++LSNIY GRWKDV RI+ AM+ G KK
Sbjct: 535 ASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKT 594
Query: 533 PGCSSIE 539
G S +E
Sbjct: 595 TGWSWVE 601
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 321/576 (55%), Gaps = 73/576 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVS 67
EQ +T + L++I ++ + L + ++ + A L M YA +F +I + + +
Sbjct: 32 EQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPA 91
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N M G+ + ++LF +M + P+ FTFP +LK C ++ AL EGE++H L++
Sbjct: 92 YNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIM 151
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF ++ FV LI +Y+ +CG++ AR
Sbjct: 152 KCGFGSHGFVKNTLIHMYA-------------------------------NCGEVEVARR 180
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI------------------ 229
+F+ ER+V WN++ +GY N E KLF +M + D+
Sbjct: 181 VFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLAD 240
Query: 230 ----SW-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
W +++ YA G V+ +RLF++M R+V +W+ +I G
Sbjct: 241 LELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISG 300
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y+ E LD F M + + PN+ T+V++LS+CA LGAL+ KWVH + + +
Sbjct: 301 YSQASRCREALDLFHEM-QKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKL 359
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
V +G AL+D YAKCG +E++++VF M K++++W +I GLA +G+G AL F+ M
Sbjct: 360 TVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLML 419
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
P+ +TFIG+L AC+H GLV+EG F SM+ D+ I P+IEHYGCMVD+L RAG +
Sbjct: 420 EKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLI 479
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA F+K MPI+ +AVIW LL SC+V+KNVE+ E +L++L LEP + ++++LSNIY
Sbjct: 480 EEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIY 539
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+GRW+D +++ M++ G KK PGCS IE++ V+
Sbjct: 540 ASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVI 575
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/538 (38%), Positives = 314/538 (58%), Gaps = 37/538 (6%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ L Q+ ++ +GL + + +I +A M YA ++F +I+ ++ WN M
Sbjct: 27 RSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIR 86
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G AQ T V L+TQM+ P+ FTF VLK+C K++ ++ G +H VLK+GF++
Sbjct: 87 GSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQS 146
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
N FV LI ++ +CGD+ +AR LF+ +
Sbjct: 147 NTFVRNTLIYFHA-------------------------------NCGDLATARALFDASA 175
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+R+V+ W+ + +GY + AR+LFD+MP KD++SWN M++ YA +G++E+ ++LF+E
Sbjct: 176 KREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDE 235
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
+P+++V +WN +I GY + L E L+ F M G+ P+D T++++LSA A LG L+
Sbjct: 236 VPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQR-PDDVTMLSILSASADLGDLEI 294
Query: 314 SKWVHVYAEYNGYQGNVCV--GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H + ++ G++ V NALIDMYAKCG I NA++VF M KD +WN+II GL
Sbjct: 295 GKKIH-RSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGL 353
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A+HG +++LF EM P+ ITF+ +L AC+H G V EG YF M + I P
Sbjct: 354 ALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPN 413
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
I+HYGCMVD+L RAG L EA DF+ M IE +A+IW LLG+CRV+ +VEL A E+L
Sbjct: 414 IKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLL 473
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCL 549
++ ++V+LSNIY G W V +++ M D G KK G S I+ + ++ L
Sbjct: 474 KMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFL 531
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 280/452 (61%), Gaps = 9/452 (1%)
Query: 97 MP--NCFTFPIVLK--SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
MP + FT+ ++K S + +R +H V+K G + FVG ALI+ YS
Sbjct: 1 MPRRDSFTYSFLIKALSAAGVAPVRA---VHSHVVKLGSVEDTFVGNALIDAYSKNGGFS 57
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A KVF EM ER+VV W + + + G++ R LF+ PE+D + WNTI+ GY
Sbjct: 58 DARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGE 117
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ A +LF +MP+++V+SW+TM+SGY GD+E + +F++MP +N+ +W ++ A
Sbjct: 118 VEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQK 177
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
GL E F +M E V + A +V++L+ACA G+L K +H Y + V
Sbjct: 178 GLVDEAGKLFAQM-KEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHV 236
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
NALIDM+ KCG + A VF++ KD ++WN+II G AMHG G AL LF +MK G
Sbjct: 237 CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQG 296
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD +T I +L ACTHMG V+EG +F +M DY I+PQIEHYGCM+DLL R G + EA
Sbjct: 297 FNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEA 356
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
VD +K MP E + VIW +LL +CR++KNVE AE+A+ L++L+P N N+ +LSNIY +
Sbjct: 357 VDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEA 416
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
G+W D+A+ ++ M+ TG +K G S +E+NE
Sbjct: 417 GQWSDMAKARMQMKGTGSQKTAGSSWVELNET 448
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 82/396 (20%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + VV G + ++ +I A ++ + ARK+FD++ +++VVSWN +
Sbjct: 27 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGE 86
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V LF D MP K V N + +G
Sbjct: 87 LAGVRKLF------DEMPE--------KDTVSWNTILDG--------------------- 111
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
Y+ +EAA+++F M ERNVV W++M++GY GD+ AR +F+ P ++++ W
Sbjct: 112 ----YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTW 167
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+VS + EA KLF QM + DV + ++L+ A +G + KR+ + +
Sbjct: 168 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRK 227
Query: 257 RNV------------------------------------FSWNGLIGGYANNGLFFEVLD 280
RN+ SWN +IGG+A +G + L+
Sbjct: 228 RNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALE 287
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNALIDM 339
F +M +G P+ T++ VLSAC +G +D + E + G + +ID+
Sbjct: 288 LFAQMKQQG-FNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDL 346
Query: 340 YAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
+ G+I+ AVD+ SM + + W +++S +H
Sbjct: 347 LGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLH 382
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/542 (38%), Positives = 319/542 (58%), Gaps = 23/542 (4%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ + + L + Q++ GL ++I+ CA + YA++MFD+I N
Sbjct: 122 EKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFM 181
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N++ GY+ ++ V+LF +M PN FT P VLK+C +A E +H L +
Sbjct: 182 YNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAI 241
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G + +FV ALI +Y I A K+F ++ ++ +V W SMI +I +
Sbjct: 242 KLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMI-------EITGVKI 294
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
D+I+ N + Y N+ A+ +FD+ +K+V+SW +M+S YA +G +E
Sbjct: 295 --------DIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVA 346
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+++F++MP +NV SWN +I Y G + E LD F +M RV P++AT+V++L+AC++
Sbjct: 347 RQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKM-RNSRVVPDEATLVSILAACSQ 405
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LG L K +H Y N V + N+LIDMYAKCG + A+D+F M K+L++WN I
Sbjct: 406 LGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVI 465
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I LA+HG G A+ LF EM+ G +PD IT G+L AC+H GLV+ GL YF M + Y
Sbjct: 466 IGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYR 525
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ +IEHY CMVDLL R G L EA++ + RMP++ D V+W LLG+CR++ NVE+ + L
Sbjct: 526 VXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQIL 585
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLG 547
++L ELEP + +V++SNIY + RW+DV +I+ M D G KK SSIE++ G
Sbjct: 586 KQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEID-----G 640
Query: 548 CL 549
C+
Sbjct: 641 CI 642
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/550 (36%), Positives = 308/550 (56%), Gaps = 44/550 (8%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNA 70
+E K LH +V SGL Y ++I A + A K+F +I WN
Sbjct: 854 MEAVKKLH---AHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNT 910
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ G AQ++ + +V + + ++ P+ TFP VLK+C K A +EGE++H V+K G
Sbjct: 911 LLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLG 970
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +IFV +LI LY+ A+ A VF EM ++VV W S+I GY + LF+
Sbjct: 971 FLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFK 1030
Query: 191 LAP---------------------------------------ERDVILWNTIVSGYIDVR 211
L E DV L NT++ Y +
Sbjct: 1031 LMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIG 1090
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ A K+F QM K+ ++ N M++ YA G++ K++F+++P +++ SW+ +I Y+
Sbjct: 1091 QLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQ 1150
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F + L+ F++M +V P+ I +VLSACA LGALD KW+H Y N + +
Sbjct: 1151 ASHFSDSLELFRQM-QRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTI 1209
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ N+LIDM+AKCG ++ A+ VF M+ KD ++WN+II GLA +G AL +FH M G
Sbjct: 1210 MENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEG 1269
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF+G+L AC + LVEEGL +F+ M +++ PQ++HYGC+VD+L+RAG+L +A
Sbjct: 1270 PRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKA 1329
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
V F+ MP+ D V+W LLG+CR + NV +AE+A ++L+EL+P N A+ ++LSNIY
Sbjct: 1330 VSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASA 1389
Query: 512 GRWKDVARIK 521
RW D ++
Sbjct: 1390 DRWSDAMNVR 1399
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 272/507 (53%), Gaps = 65/507 (12%)
Query: 27 TSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVV 86
+SGL A + T + K+ DQ+ W A Y+ F +
Sbjct: 407 SSGLRHQALSYSSTAPVPATARSSTPPSRTALKVFDQSPAPWRAFLKAYSHGPFPLEALH 466
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
LF ++ A + F F VLK+C + R G +LH LV++ GF
Sbjct: 467 LFKHARQHLA-DDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGF--------------- 510
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
E + V T++IN Y V +RCL
Sbjct: 511 ----------------EFHAYVHTALINVY------VMSRCL------------------ 530
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
+EARK+FD+MP K+V+SWN M++G+A G+VE + LF++MP RNV SW GLI
Sbjct: 531 -------VEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLI 583
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY L+ E L + M+ G + P++ T++ V+ A + LG + + ++ Y E G
Sbjct: 584 DGYTRACLYAEALTLLRHMMAGG-ISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGI 642
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ VGN+LID+YAK G ++N++ VF+ M D ++L++W +IISG AMHG AL LF
Sbjct: 643 MSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFA 702
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM+ AG P+ ITF+ ++ AC+H GLVE+GL++F+SM +Y+I P+I+H+GC++D+L RA
Sbjct: 703 EMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRA 762
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
GRL EA ++ +P+E + +W LLG C Y V + E A++ +++LE ++ +F +LS
Sbjct: 763 GRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLS 822
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKL 532
N+ +LGR+ D + + + KL
Sbjct: 823 NVLTELGRFSDAEQARKLLDQRKIVKL 849
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 213/510 (41%), Gaps = 38/510 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT A ++ YAR +FD++ +NVVSW + +GY + + + L M P+
Sbjct: 551 MITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPS 610
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V+ + + + GE L+ K G ++ VG +LI+LY+ +++ + KVF
Sbjct: 611 EITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFD 670
Query: 160 EM-DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILW--NTIVSGYIDV 210
EM D RN+V WTS+I+G+ G V A LF + P R L N G +
Sbjct: 671 EMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVE 730
Query: 211 RNMIEARKL-FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
+ + + + ++ ++ + ++ G + E +++ E +P E NV W L+G
Sbjct: 731 QGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGC 790
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPND-ATIVTVLSACARL------------------- 308
+ G A K + R D A + VL+ R
Sbjct: 791 CSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQ 850
Query: 309 -GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA-KCGIIENAVDVFNSMDTKDLITWNT 366
++ K +H + +G + +I +YA + +A VF +++ WNT
Sbjct: 851 EAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNT 910
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
++ GLA A+ + + + G PD +TF +L AC +EG + +
Sbjct: 911 LLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEG-EQMHNHVIKL 969
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ I ++ L A G LA A M ++ D V W +L+G + ++ L
Sbjct: 970 GFLLDIFVSNSLIYLYAACGALACARSVFNEMLVK-DVVSWNSLIGGYSQHNRLKEV-LT 1027
Query: 487 LERLTELEPKNPANFVMLSNIYG--DLGRW 514
L +L + E M+ I LG W
Sbjct: 1028 LFKLMQAEEVQADKVTMVKVISACTHLGDW 1057
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/526 (37%), Positives = 314/526 (59%), Gaps = 6/526 (1%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARK-MFDKITDQNVVSWNAMFNGY 75
HL+QI +++ GLE+ + I++ + +F+++ WN + GY
Sbjct: 25 HLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGY 84
Query: 76 AQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ F TV +L M+ A P+ +TFP+V+K C +R G +H LVL+ GF +
Sbjct: 85 SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKD 144
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ VGT+ ++ Y K + +A KVFGEM ERN V WT+++ Y+ G++ A+ +F+L PE
Sbjct: 145 VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE 204
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
R++ WN +V G + +++ A+KLFD+MPK+D+IS+ +M+ GYA GD+ + LFEE
Sbjct: 205 RNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEA 264
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+V +W+ LI GYA NG E F M + V P++ +V ++SAC+++G +
Sbjct: 265 RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELC 323
Query: 315 KWV--HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ V +++ N + + V ALIDM AKCG ++ A +F M +DL+++ +++ G+A
Sbjct: 324 EKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMA 382
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG G+ A+ LF +M + G +PD + F IL C LVEEGL YF+ M YSI+
Sbjct: 383 IHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASP 442
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY C+V+LL+R G+L EA + +K MP EA A W +LLG C ++ N E+AE+ L E
Sbjct: 443 DHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE 502
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
LEP++ ++V+LSNIY L RW DVA ++ M + G K+ G S I
Sbjct: 503 LEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/538 (36%), Positives = 315/538 (58%), Gaps = 7/538 (1%)
Query: 12 LETTKHLH---QIQTQVVTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
LE+ K+LH Q+ +Q++ SGL + + T I C+ A +FD + +
Sbjct: 14 LESWKNLHELNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVTFPRATFLFDHLHHPDAFH 73
Query: 68 WNAMFNGYAQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
N + YA+ +F + + +M PN +TFP+++K C I + REG + H +
Sbjct: 74 CNTIIRAYARKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCTDIGSFREGLKGHARI 133
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K GF +++F +LI +YS I A VF E ++V + SMI+GY+ G+I +AR
Sbjct: 134 VKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVKNGEIGAAR 193
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+F P+RDV+ WN +++GY+ V ++ A +LF+ +P++D +SWN M+ G A G+V
Sbjct: 194 KVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSWNCMIDGCARVGNVSL 253
Query: 247 CKRLFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ F+ MP RNV SWN ++ +A + E L F +M+ PN+AT+V+VL+A
Sbjct: 254 AVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGREAVPNEATLVSVLTA 313
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA LG L WVH + N + +V + L+ MYAKCG ++ A VF+ M + +++W
Sbjct: 314 CANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDLAKGVFDEMPVRSVVSW 373
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N++I G +HG G AL LF EM+ AG+ P+ TFI +L ACTH G+V EG YF M
Sbjct: 374 NSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFDLMQR 433
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
Y I P++EHYGCMVDLLARAG + + + ++ +P++A + IW LL C + + EL E
Sbjct: 434 VYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLSGCSNHLDSELGE 493
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+ +R ELEP++ +++LSN+Y GRW DV +++ +++ G +K S + + +
Sbjct: 494 IVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKGLQKEAASSLVHLED 551
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/563 (36%), Positives = 307/563 (54%), Gaps = 63/563 (11%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-- 97
++ A+ +Q AR++FD + +++VSWN+M GY +N R + F +M + D +
Sbjct: 146 MVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSW 205
Query: 98 -------------------------PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
PN ++ +L + + E L
Sbjct: 206 NLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRL----FDQMPI 261
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N+ A+I Y ++ A +F EM E+N + WT++INGY+ G + AR L
Sbjct: 262 RNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQM 321
Query: 193 PER-------------------------------DVILWNTIVSGYIDVRNMIEARKLFD 221
P R DV+ WNT+++GY M EA LF
Sbjct: 322 PYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFK 381
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
QM KKD++SWNTM++ YA G ++ ++FEEM E+N+ SWN LI G NG + + L +
Sbjct: 382 QMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKS 441
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F M EG+ P+ +T LS+CA L AL K +H +GY ++ V NALI MYA
Sbjct: 442 FMLMGHEGQK-PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYA 500
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
KCG I +A +F +D D+++WN++I+ A++G G AL LFH+M+ G PD +TF+G
Sbjct: 501 KCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVG 560
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
IL AC+H+GL+++GL F+ M Y+I P EHY CMVDLL RAGRL EA V+ M I
Sbjct: 561 ILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKIN 620
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
A+A IW LLG+CR++ N+ELA+ A E+L E EP +N+V+LSN+ + GRW +VAR++
Sbjct: 621 ANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVR 680
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
M++ G +K PG S IE+ V
Sbjct: 681 RLMKEKGAEKQPGWSWIELQNRV 703
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 227/492 (46%), Gaps = 72/492 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+A A+ +++ AR++FD + +N+VSWN+M Y N+ LF +M D
Sbjct: 52 MISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRD---- 107
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+++ +++ + L + L L+ ++ N A++ Y+ + + A ++F
Sbjct: 108 LYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRLFD 164
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M +++V W SM+ GY G++ FE ERDV+ WN +V G+++V ++ + +
Sbjct: 165 AMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEF 224
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+++P + +SW TML G+A G + E +RLF++MP RNV +WN +I Y N E +
Sbjct: 225 FEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAI 284
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY----------NGYQGN 329
F M + N + TV++ R+G LD ++ + Y +GY N
Sbjct: 285 SLFMEMPEK-----NSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQN 339
Query: 330 -----------------VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
V N +I Y++CG ++ A+ +F M KD+++WNT+++ A
Sbjct: 340 KRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYA 399
Query: 373 MHGRGAGALSLFHEMK-------------------------------NAGEMPDGITFIG 401
G+ A+ +F EMK + G+ PD TF
Sbjct: 400 QVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFAC 459
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L +C H+ ++ G Q + M + ++ + A+ G ++ A K +
Sbjct: 460 GLSSCAHLAALQVGKQLHQ-LVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDID-H 517
Query: 462 ADAVIWANLLGS 473
D V W +L+ +
Sbjct: 518 FDVVSWNSLIAA 529
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 183/413 (44%), Gaps = 72/413 (17%)
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
V ++ N ++I ++ I A ++F M +RN+V W SMI Y+ + A
Sbjct: 37 VFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEA 96
Query: 186 RCLFELAPERDVILW--------------------------------NTIVSGYIDVRNM 213
R LF+ P RD+ W N +V+GY R
Sbjct: 97 RQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQF 156
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
EAR+LFD MP KD++SWN+ML+GY NG++ + FEEM ER+V SWN ++ G+ G
Sbjct: 157 DEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVG 216
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
+ F+++ PN + VT+L AR G + ++ + NV
Sbjct: 217 DLNSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIR----NVVAW 267
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAG 391
NA+I Y + ++ A+ +F M K+ I+W T+I+G G+ A L ++M +N
Sbjct: 268 NAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVA 327
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD--YSIVPQIE-----HYGCMVDLLAR 444
I+ Y Q+ MD I QI + M+ ++
Sbjct: 328 AQTAMIS------------------GYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQ 369
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
GR+ EA+ K+M ++ D V W ++ S Y V + A++ E++ KN
Sbjct: 370 CGRMDEALHLFKQM-VKKDIVSWNTMVAS---YAQVGQMDAAIKIFEEMKEKN 418
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 163/360 (45%), Gaps = 29/360 (8%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ +I ++ ++ AR++ +++ +NV + AM +GY QN+ +F Q
Sbjct: 292 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQ 351
Query: 91 MKKLDAMPNCFTFPIV-LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+ D + C+ I C +++ E LH + K + +I ++ Y+
Sbjct: 352 ISIRDVV--CWNTMIAGYSQCGRMD-----EALH--LFKQMVKKDIVSWNTMVASYAQVG 402
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-RCLFELAPERDVILWNTIVSGYI 208
++AA K+F EM E+N+V W S+I+G G + A + + E +T G
Sbjct: 403 QMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLS 462
Query: 209 DVRNM--IEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++ ++ K Q+ K D+ N +++ YA G + + LF+++ +V S
Sbjct: 463 SCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVS 522
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKW 316
WN LI YA NG E L F +M EG V P++ T V +LSAC+ +G +D F
Sbjct: 523 WNSLIAAYALNGNGREALKLFHKMEVEG-VAPDEVTFVGILSACSHVGLIDQGLKLFKCM 581
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
V Y + C ++D+ + G +E A + M + W ++ +HG
Sbjct: 582 VQAYNIEPLAEHYAC----MVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG 637
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 17/228 (7%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
++ AH L+ K LHQ+ V+ SG +++ +IT A+ ++ A +F I
Sbjct: 462 SSCAHLAALQVGKQLHQL---VMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHF 518
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL- 122
+VVSWN++ YA N R + LF +M+ P+ TF +L +C + + +G +L
Sbjct: 519 DVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLF 578
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
C+V +++L +E A+++ M N +W +++ G+
Sbjct: 579 KCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGN 638
Query: 182 I----VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ +A L E P + S Y+ + NM +D++ +
Sbjct: 639 LELAKFAAEKLLEFEPHK--------TSNYVLLSNMQAEAGRWDEVAR 678
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/503 (39%), Positives = 296/503 (58%), Gaps = 11/503 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+++ AQ + AR +FD++ ++N VSWNA+ + Y QN +LF + +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
NC +L VK + E + + ++ +I Y+ I+ A ++F
Sbjct: 223 NC-----LLGGFVKKKKIVEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
E ++V WT+M++GYI + AR LF+ PER+ + WN +++GY+ M A++
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LFD MP ++V +WNTM++GYA G + E K LF++MP+R+ SW +I GY+ +G FE
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L F +M EG N ++ + LS CA + AL+ K +H GY+ VGNAL+
Sbjct: 394 LRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG IE A D+F M KD+++WNT+I+G + HG G AL F MK G PD T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
+ +L AC+H GLV++G YF +M DY ++P +HY CMVDLL RAG L +A + +K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P E DA IW LLG+ RV+ N ELAE A +++ +EP+N +V+LSN+Y GRW DV
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
+++V MRD G KK+PG S IE+
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQ 655
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 228/485 (47%), Gaps = 32/485 (6%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
HS + T + + QT+ + + I++ + + A ++F ++ + VS
Sbjct: 38 HSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS 97
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N M +GY +N LF +M + D + ++ +++K V+ L + EL ++
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMP 153
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ ++ ++ Y+ ++ A VF M E+N V W ++++ Y+ + A
Sbjct: 154 ER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ ++ WN ++ G++ + ++EAR+ FD M +DV+SWNT+++GYA +G ++E
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++LF+E P ++VF+W ++ GY N + E + F +M N+ + +L+ +
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-----NEVSWNAMLAGYVQ 324
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
++ +K + NV N +I YA+CG I A ++F+ M +D ++W +
Sbjct: 325 GERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G + G AL LF +M+ G + +F L C + +E G +
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG------KQLHGR 434
Query: 428 IVPQIEHYGCMVD-----LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+V GC V + + G + EA D K M + D V W ++ Y
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAG---YSRHGF 490
Query: 483 AELAL 487
E+AL
Sbjct: 491 GEVAL 495
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 112 KINAL-REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE-----AAYKVFGEMDERN 165
K AL R ++LH L NG + +S +A + + K + + +
Sbjct: 5 KFRALSRRAQQLHYTSL-NGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSD 63
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ W I+ Y+ G A +F+ P + +N ++SGY+ ARKLFD+MP+
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE 123
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+D++SWN M+ GY N ++ + + LFE MPER+V SWN ++ GYA NG + F RM
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
+ ND + +LSA + ++ + + E + N L+ + K
Sbjct: 184 PEK-----NDVSWNALLSAYVQNSKMEEACMLFKSRE----NWALVSWNCLLGGFVKKKK 234
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
I A F+SM+ +D+++WNTII+G A G+ A LF E + D T+ ++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSG 290
Query: 406 CTHMGLVEEGLSYFQSMAMD------------------------YSIVP--QIEHYGCMV 439
+VEE F M + ++P + + M+
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
A+ G+++EA + +MP + D V WA ++
Sbjct: 351 TGYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 52/303 (17%)
Query: 21 IQTQVVTSGLEKSDYITPR-------IITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
IQ ++V E D + R ++ Q ++M A+++FD + +NV +WN M
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 74 GYAQ--------NEFHR-----------------------TVVVLFTQMKKLDAMPNCFT 102
GYAQ N F + + LF QM++ N +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F L +C + AL G++LH ++K G+ FVG AL+ +Y +IE A +F EM
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEA 216
+++V W +MI GY G A FE L P+ ++ ++S + +
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV--AVLSACSHTGLVDKG 529
Query: 217 RKLFDQMPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYA 270
R+ F M + + N+ M+ G +E+ L + MP E + W L+G
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 271 NNG 273
+G
Sbjct: 590 VHG 592
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T A LE K LH ++V G E ++ ++ + + A +F ++ +
Sbjct: 417 STCADVVALELGKQLH---GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-L 122
++VSWN M GY+++ F + F MK+ P+ T VL +C + +G +
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
+ + G N +++L +E A+ + M E + +W +++ G+
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 182 I----VSARCLFELAPE 194
+A +F + PE
Sbjct: 594 TELAETAADKIFAMEPE 610
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 319/525 (60%), Gaps = 7/525 (1%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL+QI +++ GLE+ + I + ++Y+ +F+++ WN + GY+
Sbjct: 25 HLNQIHARIIRKGLEQDQNLI--SIFISSSSSSLSYSSSVFERVPYPGTYLWNHLIKGYS 82
Query: 77 QN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
F TV +L M+ A P+ +TFP+V+K C R G +H LVL+ GF ++
Sbjct: 83 NKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCSNNAEFRVGSTVHGLVLRIGFDKDV 142
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+GT+ ++ Y K + +A KVFGEM ERNVV WT++I Y+ G++ A+ +F+L PER
Sbjct: 143 VLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIVAYVKSGELEEAKRMFDLMPER 202
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
++ WN +V G + +++ ARKLFD+MPK+D+IS+ +M+ GYA GD+ + LFE
Sbjct: 203 NLGTWNALVDGLVKSGDLVNARKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFENAR 262
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+V +W+ LI GYA NG E F M + V P++ +V ++SAC+++G + +
Sbjct: 263 GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELCE 321
Query: 316 WV--HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
V +++ N + + + ALIDM AKCG ++ A +F M +DL+++ +++ G+A+
Sbjct: 322 KVDSYLHQSMNKFSSHYVI-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAI 380
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G+ A+ LF +M + G +PD + F IL C+ LVEEGL YF+ M +YSI+ +
Sbjct: 381 HGCGSEAVRLFEKMVDEGIVPDEVAFTVILKVCSQSRLVEEGLRYFELMRKEYSILASPD 440
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY C+V+LL+R G+L EA + +K MP EA A W +LLG C ++ N E+AE+ +L EL
Sbjct: 441 HYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARQLFEL 500
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
EP++ ++V+LSNIY L RW D+A ++ M + G KK+ G S I
Sbjct: 501 EPQSAGSYVLLSNIYAALDRWADLAHLRDKMNENGIKKICGRSWI 545
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/503 (39%), Positives = 294/503 (58%), Gaps = 11/503 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
I++ AQ + AR++FD++ ++N VSWNA+ + Y QN VLF + +
Sbjct: 158 ILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSW 217
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
NC +L VK + E + + ++ +I Y+ I+ A ++F
Sbjct: 218 NC-----LLGGFVKKKKIVEARQF----FDSMKVRDVVSWNTIITGYAQNGEIDEARQLF 268
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
E +V WT+M++GYI + AR LF+ PER+ + WN +++GY+ + A++
Sbjct: 269 DESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKE 328
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LFD MP ++V +WNTM++GYA G + E K LF++MP+R+ SW +I GY+ +G +E
Sbjct: 329 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEA 388
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L F M EG N ++ + LS CA + AL+ K +H GY+ VGNAL+
Sbjct: 389 LRLFVLMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 447
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG IE A D+F M KD+++WNT+I+G + HG G AL F MK G PD T
Sbjct: 448 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDAT 507
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
+ +L AC+H GLV++G YF +M DY + P +HY CMVDLL RAG L EA + +K M
Sbjct: 508 MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P E DA IW LLG+ RV+ N ELAE A +++ +EP+N +V+LSN+Y GRW DV
Sbjct: 568 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 627
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
+++V MRD G KK+PG S IE+
Sbjct: 628 KLRVRMRDKGVKKVPGYSWIEIQ 650
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 167/358 (46%), Gaps = 72/358 (20%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A+ TG+ EA +VF M + V + +MI+GY+ G+ AR LF+ PERD++
Sbjct: 65 AISSYMRTGRCSEA-LRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVS 123
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
WN ++ GY+ RN+ +AR+LF++MP++DV SWNT+LSGYA NG V++ +R+F+ MPE+N
Sbjct: 124 WNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKND 183
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SWN L+ Y N E AC G+ + W V
Sbjct: 184 VSWNALLSAYVQNSKLEE--------------------------ACVLFGSRE--NWALV 215
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
N L+ + K I A F+SM +D+++WNTII+G A +G
Sbjct: 216 ------------SWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDE 263
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD-------------- 425
A LF E + D T+ ++ +VEE F M
Sbjct: 264 ARQLFDE----SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQ 319
Query: 426 ----------YSIVP--QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ ++P + + M+ A+ G+++EA + +MP + D V WA ++
Sbjct: 320 GERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 376
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 52/303 (17%)
Query: 21 IQTQVVTSGLEKSDYITPR-------IITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
IQ ++V E D + R ++ Q +++ A+++FD + +NV +WN M
Sbjct: 287 IQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMIT 346
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMP-------------------------------NCFT 102
GYAQ LF +M K D + N +
Sbjct: 347 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSS 406
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F L +C + AL G++LH ++K G+ FVG AL+ +Y +IE A +F EM
Sbjct: 407 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 466
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEA 216
+++V W +MI GY G A FE L P+ ++ ++S + +
Sbjct: 467 GKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMV--AVLSACSHTGLVDKG 524
Query: 217 RKLFDQMPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYA 270
R+ F M + + N+ M+ G +EE L + MP E + W L+G
Sbjct: 525 RQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASR 584
Query: 271 NNG 273
+G
Sbjct: 585 VHG 587
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 9/189 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K LH ++V G E ++ ++ + + A +F ++ +++VSWN M
Sbjct: 420 LELGKQLH---GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 476
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNG 130
GY+++ F + F MK+ P+ T VL +C + +G + H + G
Sbjct: 477 IAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYG 536
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSA 185
R N +++L +E A+ + M E + +W +++ G+ +A
Sbjct: 537 VRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 596
Query: 186 RCLFELAPE 194
+F + PE
Sbjct: 597 DKIFAMEPE 605
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 302/507 (59%), Gaps = 14/507 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ ++ AR++FD++ + +V++W + +GY + LF ++DA N
Sbjct: 73 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLF---DRVDAKKN 129
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ ++ ++ N + + E+L N+ +I+ Y+ I++A +F
Sbjct: 130 VVTWTAMVGGYIRSNKISDAEKL----FNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 185
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M ERNVV W ++++ CG I AR LF+ PERDVI W +++G +D EA L
Sbjct: 186 KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLD-----EALDL 240
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F++MP++D+ SWNTM++G NGD+ ++LF EMP++NV SW +I G G E L
Sbjct: 241 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 300
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F RML+ PN T V+VL AC+ L L + VH YQ + V +ALI+M
Sbjct: 301 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 360
Query: 340 YAKCGIIENAVDVFNSMDT--KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
Y+KCG + A +F+ T +DL++WN II+ A HG G A++ F EM+ +G PD +
Sbjct: 361 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDV 420
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T++G+L AC+H GLVEEGL YF + D SI+ + +HY C+VDL RAGRL EA F++R
Sbjct: 421 TYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIER 480
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
+ + A +W LL C V+ NV++ + A ++L E+EP+N +++LSNIY G+W++
Sbjct: 481 LETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREA 540
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV 544
AR+++ M+D G KK PGCS IEV V
Sbjct: 541 ARVRLKMKDKGLKKQPGCSWIEVGNRV 567
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 160/333 (48%), Gaps = 29/333 (8%)
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM- 223
NV MI G I+ AR LF+ E DVI W T++SGYI + EAR+LFD++
Sbjct: 66 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125
Query: 224 PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
KK+V++W M+ GY + + + ++LF EMP +NV SWN +I GYA NG + F+
Sbjct: 126 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 185
Query: 284 RMLTEGRVFPNDATIVTVLSACA----------RLGALDFSKWVHVYAEY---------N 324
+M V N T++++L+ C R+ D W + A
Sbjct: 186 KMPERNVVSWN--TVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFER 243
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ ++ N +I + G + A +FN M K++I+W T+I+G G AL +F
Sbjct: 244 MPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIF 303
Query: 385 HEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDL 441
M G P+ TF+ +L AC+++ + EG Q ++ V Q + ++++
Sbjct: 304 SRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIIS---KTVYQDSTFVVSALINM 360
Query: 442 LARAGRLAEAVD-FVKRMPIEADAVIWANLLGS 473
++ G L A F M + D V W ++ +
Sbjct: 361 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAA 393
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFN 73
+ +HQI ++ V + S ++ +I ++ ++ ARKMFD + +++VSWN +
Sbjct: 336 QQVHQIISKTV---YQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIA 392
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
YA + + + + F +M+K P+ T+ +L +C + EG + ++K+
Sbjct: 393 AYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKD---R 449
Query: 134 NIFVG----TALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDI----VS 184
+I V L++L ++ A+ ++ + + VW +++ G ++ +
Sbjct: 450 SILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQA 509
Query: 185 ARCLFELAPE 194
A+ L E+ PE
Sbjct: 510 AKKLLEVEPE 519
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
GNV N +I +K G I A +F+ M D+ITW T+ISG G A LF +
Sbjct: 65 GNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV 124
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ +T+ ++ + + F M + + M+D A+ GR
Sbjct: 125 DAKKNV---VTWTAMVGGYIRSNKISDAEKLFNEMPN-----KNVVSWNTMIDGYAQNGR 176
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+ A+ ++MP E + V W ++ +E A +R+ E
Sbjct: 177 IDSAMYLFEKMP-ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPE 220
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 315/535 (58%), Gaps = 36/535 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+ K+L Q+ V +GL+ I +++ +A + + YAR++F + +V N +
Sbjct: 17 SLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTL 76
Query: 72 FNGYAQNEFHRTVVVLFTQMKK-LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
G A+++ + ++ F +M++ L A + F+F +LK+ +L G +LHC + +G
Sbjct: 77 IRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHG 136
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++FVGT L+ +YS CG + A+ +FE
Sbjct: 137 LDTHLFVGTTLVSMYS-------------------------------ECGFVAFAKKVFE 165
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
E +V+ WN +V+ ++ A +F++MP +++ SWN ML+GY G++E ++L
Sbjct: 166 EMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKL 225
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F EMP ++ SW+ +I G+A+NG F+E F+ + G + PN+ ++ LSACA GA
Sbjct: 226 FLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVG-MRPNEVSLTGALSACADAGA 284
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIIS 369
++F K +H + E +G+ V V NAL+D Y+KCG + A VF M + + +++W ++I+
Sbjct: 285 IEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIA 344
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLAMHG G A+ LFHEM+ +G PDGI FI IL AC+H GL+E+G YF M Y+I
Sbjct: 345 GLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIE 404
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P IEHYGCMVDL RAG+L +A +F+ MP+ A+IW LLG+C ++ NV+LAE ER
Sbjct: 405 PAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKER 464
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+EL+P N + V+LSNIY G+WKDVA ++ +M D K PG S IEV++++
Sbjct: 465 LSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIM 519
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/537 (37%), Positives = 314/537 (58%), Gaps = 16/537 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+HL+QI Q+V SGL +S ++ + + A + ++ YARK+FD+ + +V WNA+ GY
Sbjct: 85 RHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + F + ++++M+ P+ FT P VLK+C + L G+ +H + + GF +++
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV L+ LY+ +E A VF +D+RN+V WTSMI+GY G + A +F +R
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264
Query: 196 DV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKD-------VISWNTMLSGYANNGDV 244
+V I +++ Y DV ++ + + + + K +IS M YA G V
Sbjct: 265 NVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAM---YAKCGQV 321
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ F++M NV WN +I GYA NG E + F+ M+++ + + T+ + + A
Sbjct: 322 MVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISK-NIRTDSITVRSAILA 380
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA++G+LD +KW+ Y Y+ +V V ALIDM+AKCG ++ A +VF+ KD++ W
Sbjct: 381 CAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVW 440
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+ +I G +HGRG A+ LF+ MK AG P+ +TF+G+L AC H GLVEEG F SM
Sbjct: 441 SAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY 500
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
Y I + +HY C+VDLL R+G L EA DF+ MPIE +W LLG+C++Y++V L E
Sbjct: 501 -YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGE 559
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
A E+L L+P N ++V LSN+Y W VA++++ MR+ G K G S IE+N
Sbjct: 560 YAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEIN 616
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 314/562 (55%), Gaps = 58/562 (10%)
Query: 25 VVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHR 82
+V +GL + + + R+I CA + + + Y + + N SWN G+ +E R
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 83 TVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
VVL+ ++ + D P+ +T+P++ K+C +++ +R G E+ VL GF ++IFV A+
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS----------------------- 178
I L + ++ A K+F + R++V W SMINGY+
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDE 180
Query: 179 ---CGDIVSARCLFELAPERD-------------VILWNTIVSGYIDVRNMIEARKLFDQ 222
G + S L +L R+ V L N ++ Y+ N+ ARKLFD
Sbjct: 181 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 240
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
M K ++SW TM LF+EMP+++V WN +IGGY + E L F
Sbjct: 241 MTNKTMVSWTTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALF 285
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
M + P++ T+V+ LSAC++LGALD W+H Y E + NV +G ALIDMYAK
Sbjct: 286 NEM-QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 344
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG I A+ VF + ++ +TW IISGLA+HG GA++ F EM + MPD +TF+G+
Sbjct: 345 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 404
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC H GLVEEG YF M+ +++ P+++HY CMVDLL RAG L EA + +K MPIEA
Sbjct: 405 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 464
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
DAV+W L +CR++ NV + E A +L +++P + +V+L+N+YG+ WK+ + +
Sbjct: 465 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRK 524
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
MR G +K PGCSSIEVN +V
Sbjct: 525 LMRQRGVEKTPGCSSIEVNGIV 546
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 182/398 (45%), Gaps = 59/398 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G + +++ +I + ARKMFDK +++VSWN+M NGY +
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG 159
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + + +MK P+ T V+ SC ++ L G E HC + +NG + + +
Sbjct: 160 WAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLAN 219
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+++Y +E+A K+F M + +V WT+M LF+ P++DV+
Sbjct: 220 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM---------------LFDEMPDKDVVP 264
Query: 200 WNTIVSGYIDVRNMIEARKLFDQM------PKK----------------DVISW------ 231
WN ++ GY+ EA LF++M P + DV W
Sbjct: 265 WNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE 324
Query: 232 -----------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
++ YA G + + ++F+E+P RN +W +I G A +G +
Sbjct: 325 KHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIA 384
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WVHVYAEYNGYQGNVCVGNALID 338
F M+ + V P++ T + +LSAC G ++ + + + +++N + + ++D
Sbjct: 385 YFSEMI-DNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFN-LSPKLKHYSCMVD 442
Query: 339 MYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ + G++E A ++ SM + D + W + +HG
Sbjct: 443 LLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 314/602 (52%), Gaps = 78/602 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV----------- 65
++ + V+ SG +I R+I A ++ + R++FDK+ +N+
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 66 --------------------VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPI 105
+WN+M +G+AQ++ + F M K + N ++F
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
VL +C +N + +G ++H L+ K+ F +++++G+AL+++YS + A +VF EM +RN
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPE------------------------------- 194
VV W S+I + G V A +F++ E
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 195 ---------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
D+IL N V Y + EAR +FD MP ++VI+ +M+SGYA +
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ +F +M ERNV SWN LI GY NG E L F +L V P + +L AC
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKAC 396
Query: 306 ARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
A L L HV+ +G+ + ++ VGN+LIDMY KCG +E VF M +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D ++WN +I G A +G G AL LF EM +GE PD IT IG+L AC H G VEEG YF
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM D+ + P +HY CMVDLL RAG L EA ++ MP++ D+VIW +LL +C+V++N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ L + E+L E+EP N +V+LSN+Y +LG+W+DV ++ +MR G K PGCS I+
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 540 VN 541
+
Sbjct: 637 IQ 638
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 219/496 (44%), Gaps = 96/496 (19%)
Query: 94 LDAMPNCFTFPIVLKSCVK--INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
L + + F +L SC+K ++A+ +H V+K+GF IF+ LI+ YS ++
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSL 71
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
E +VF +M +RN+ W S++ G G + A LF PERD WN++VSG+
Sbjct: 72 EDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 131
Query: 212 NMIEARKLFDQMPKK---------------------------------------DVISWN 232
EA F M K+ DV +
Sbjct: 132 RCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
++ Y+ G+V + +R+F+EM +RNV SWN LI + NG E LD F+ ML E RV
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML-ESRVE 250
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNG-YQGNVCVGNALIDMYAKCGIIENAVD 351
P++ T+ +V+SACA L A+ + VH N + ++ + NA +DMYAKC I+ A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 352 VFNSMDTKDLI-------------------------------TWNTIISGLAMHGRGAGA 380
+F+SM +++I +WN +I+G +G A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 381 LSLFHEMKNAGEMPDGITFIGILCAC-----------THMGLVEEGLSYFQSMAMDYSIV 429
LSLF +K P +F IL AC H+ +++ G FQS D V
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-FQSGEEDDIFV 429
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW-ANLLGSCRVYKNVELAELALE 488
++D+ + G + E ++M +E D V W A ++G + E EL E
Sbjct: 430 GN-----SLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 489 RLTELEPKNPANFVML 504
L E P + M+
Sbjct: 484 MLESGE--KPDHITMI 497
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 281 AFKRMLTEGRVFPNDATIVTVLSAC--ARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+F ++ + F + + +L +C ++L A+ + ++VH +G+ + + N LID
Sbjct: 5 SFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLID 63
Query: 339 MYAKCGIIENAVDVFN-------------------------------SMDTKDLITWNTI 367
Y+KCG +E+ VF+ SM +D TWN++
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+SG A H R AL F M G + + +F +L AC+ + + +G+ S+
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIAKSP 182
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + +VD+ ++ G + +A M + + V W +L+
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLI 225
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 308/524 (58%), Gaps = 43/524 (8%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++ AR +F+++ +++VVSWNAM +G+AQN F +F QM + N ++ +L +
Sbjct: 138 LSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSA 193
Query: 110 CVKINALREGEEL------------HCLV--------------------LKNGFRANIFV 137
V+ + + L +CL+ +++ NI
Sbjct: 194 YVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNI-- 251
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
+I Y+ + A ++F E+ R+V WT+M++G++ G + A +FE PE++
Sbjct: 252 ---MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNE 308
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ WN +++GY+ + + +AR+LFDQMP ++ SWNTM++GYA G++++ K LF+EMP+R
Sbjct: 309 VSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR 368
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+ SW +I GYA +G E L F +M +G + N + + LS+CA + AL+ K +
Sbjct: 369 DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL-NRSALACALSSCAEIAALELGKQL 427
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H G+Q GNAL+ MY KCG IE A DVF + KD+++WNT+I+G A HG G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL+LF MK + PD +T +G+L AC+H GLV++G+ YF SM +Y I +HY C
Sbjct: 488 KEALALFESMKMTIK-PDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTC 546
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
M+DLL RAGRL EA++ +K MP DA W LLG+ R++ + EL E A E++ E+EP N
Sbjct: 547 MIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+V+LSN+Y GRW++V ++ MRD G KK+PG S +E+
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQ 650
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 197/420 (46%), Gaps = 50/420 (11%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
ARK+F+K+ D++++SWN M +GY +N LF QM + K V
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE--------------KDVVS 155
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
NA+ G +NGF +E A K+F +M +N + W +
Sbjct: 156 WNAMLSG------FAQNGF-------------------VEEARKIFDQMLVKNEISWNGL 190
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
++ Y+ G I AR LF+ + +++ WN ++ GY+ + + +AR LFD+MP +D ISWN
Sbjct: 191 LSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWN 250
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
M++GYA NG + E +RLFEE+P R+VF+W ++ G+ NG+ E F+ M + V
Sbjct: 251 IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
N V S K ++ + N N ++ YA+CG I+ A +
Sbjct: 311 WNAMIAGYVQSQ-------QIEKARELFDQMPSR--NTSSWNTMVTGYAQCGNIDQAKIL 361
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M +D I+W +ISG A G+ AL LF +MK G + + L +C + +
Sbjct: 362 FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAAL 421
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
E G + I ++ + + G + EA D + + E D V W ++
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFDVFEDI-TEKDIVSWNTMIA 479
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 25/333 (7%)
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
I Y E+A VF M R+ V + +MI+GY+S AR +FE P+RD+I WN
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++SGY+ N+ AR LF+QMP+KDV+SWN MLSG+A NG VEE +++F++M +N S
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEIS 186
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT---VLSACARLGALDFSKWVH 318
WNGL+ Y NG + DA R L + ++ D IV+ ++ R LD ++ +
Sbjct: 187 WNGLLSAYVQNG---RIEDA--RRLFDSKM---DWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ N +I YA+ G++ A +F + +D+ W ++SG +G
Sbjct: 239 DRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
A +F EM E +++ ++ +E+ F M + M
Sbjct: 295 EATRIFEEMPEKNE----VSWNAMIAGYVQSQQIEKARELFDQMP-----SRNTSSWNTM 345
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V A+ G + +A MP + D + WA ++
Sbjct: 346 VTGYAQCGNIDQAKILFDEMP-QRDCISWAAMI 377
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 180/366 (49%), Gaps = 22/366 (6%)
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+ ++V W I+ Y+ G SA +F R + +N ++SGY+ ARK+F++
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP +D+ISWN MLSGY NG++ + LF +MPE++V SWN ++ G+A NG E F
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF 176
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ML + + N +LSA + G ++ ++ ++ ++ + N L+ Y +
Sbjct: 177 DQMLVKNEISWN-----GLLSAYVQNGRIEDAR--RLFDSKMDWE--IVSWNCLMGGYVR 227
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
+++A +F+ M +D I+WN +I+G A +G + A LF E+ + D + +
Sbjct: 228 KKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELP----IRDVFAWTAM 283
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ G+++E F+ M + + M+ ++ ++ +A + +MP
Sbjct: 284 VSGFVQNGMLDEATRIFEEMPEKNEV-----SWNAMIAGYVQSQQIEKARELFDQMP-SR 337
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+ W ++ N++ A++ + E+ ++ ++ + + Y G+ ++ + +
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFD---EMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 523 AMRDTG 528
M+ G
Sbjct: 395 KMKRDG 400
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 78/343 (22%)
Query: 23 TQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF---------- 72
T++ EK++ +I Q +Q+ AR++FD++ +N SWN M
Sbjct: 297 TRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNID 356
Query: 73 ---------------------NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+GYAQ+ + LF +MK+ + N L SC
Sbjct: 357 QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCA 416
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+I AL G++LH ++K GF+ G AL+ +Y +IE A+ VF ++ E+++V W +
Sbjct: 417 EIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNT 476
Query: 172 MINGYISCGDIVSARCLFE-----LAPERDVIL-------------------WNTIVSGY 207
MI GY G A LFE + P+ DV L +N++ Y
Sbjct: 477 MIAGYARHGFGKEALALFESMKMTIKPD-DVTLVGVLSACSHTGLVDKGMEYFNSMYQNY 535
Query: 208 ------------IDV----RNMIEARKLFDQMP-KKDVISWNTMLSGYANNGDVE----E 246
ID+ + EA L MP D +W +L +GD E
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKA 595
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
+++FE P+ N + L YA +G + EV + +M +G
Sbjct: 596 AEKVFEMEPD-NSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 50/254 (19%)
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+E++ + D++ WN +S Y G E +F M R+ ++N +I GY +N
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN 105
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
F F++M P+ D W
Sbjct: 106 KFDCARKVFEKM-------PDR----------------DLISW----------------- 125
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
N ++ Y K G + A +FN M KD+++WN ++SG A +G A +F +M E
Sbjct: 126 NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNE- 184
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
I++ G+L A G +E+ F S MD+ IV + C++ R RL +A
Sbjct: 185 ---ISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVS----WNCLMGGYVRKKRLDDARS 236
Query: 454 FVKRMPIEADAVIW 467
RMP+ D + W
Sbjct: 237 LFDRMPVR-DKISW 249
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITA----CAQLKQMTYARKMFDKITDQNVVS 67
LE K LH ++V +G + + YI + A C +++ A +F+ IT++++VS
Sbjct: 421 LELGKQLH---GRLVKAGFQ-TGYIAGNALLAMYGKCGSIEE---AFDVFEDITEKDIVS 473
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GYA++ F + + LF M K+ P+ T VL +C + +G E +
Sbjct: 474 WNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMY 532
Query: 128 KN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI--- 182
+N G AN T +I+L ++ A + M + W +++ GD
Sbjct: 533 QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Query: 183 -VSARCLFELAPE 194
+A +FE+ P+
Sbjct: 593 EKAAEKVFEMEPD 605
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/577 (35%), Positives = 327/577 (56%), Gaps = 45/577 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITDQNVVS-- 67
+T++ + +I + T+G K+ +T RI+ A A ++ +AR +F + + S
Sbjct: 25 KTSEDVSKIHARKGTTGFIKNTNLTTRIVLAFAASRRSYLAEFARCVFHEYHVSSXXSGN 84
Query: 68 ------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
WNA+ ++ R ++LF M K + F+ +VLK+C ++ ++EG +
Sbjct: 85 VEDPFLWNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQ 144
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
H + K G +++F+ LI LY + A +VF M +R+ V + SMI+GY+ CG
Sbjct: 145 XHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGL 204
Query: 182 IVSARCLFELAP----------------------------------ERDVILWNTIVSGY 207
I SAR LF+L P E+D+I WN+++ GY
Sbjct: 205 IESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLIDGY 264
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + +A+ LFD+MP++DV++W TM+ GYA G V + K LF++MP+R+V ++N ++
Sbjct: 265 VKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMA 324
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY N E +D F M E + P++ T+V VLSA A+LG L + +H+Y +
Sbjct: 325 GYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFL 384
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+G ALIDMY+KCG I+ A+ VF ++ K + WN +I GLA+HG G A + ++
Sbjct: 385 LGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQI 444
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+GR
Sbjct: 445 ERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGR 504
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ A + ++ MPIE + VIW L +C +K E EL + L NP+++V+LSN+
Sbjct: 505 IELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNM 564
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y LG WK+V R++ M++ +K+PGCS IE++ V
Sbjct: 565 YASLGMWKEVRRVRTMMKERKIQKIPGCSWIELDGSV 601
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/536 (38%), Positives = 304/536 (56%), Gaps = 36/536 (6%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFNGY 75
L QI ++ G + +I A A + YA ++F +IT+ ++ WN M G
Sbjct: 29 LKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIFMWNTMMRGS 88
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+Q++ VV+L+TQM+ P+ FTF +LK C ++ + G +H VLK GF N
Sbjct: 89 SQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVNS 148
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV LI +S +CGD+V AR +F PER
Sbjct: 149 FVRNTLIYFHS-------------------------------NCGDLVIARSIFYDLPER 177
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V+ W+ + +GY + AR++FD+MP KD++SWN M++GY NG++E + LF+E P
Sbjct: 178 SVVSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAP 237
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
E++V +WN +I GY G + L+ F+ M G P++ T++++LSACA LG L +
Sbjct: 238 EKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGEC-PDEVTMLSLLSACADLGDLQVGR 296
Query: 316 WVHV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+H +E +V +GNAL+DMYAKCG IE A+ VF M KD+ TWN++I GLA H
Sbjct: 297 KLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFH 356
Query: 375 GRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
G ++ LF EM+ + P+ ITF+G++ AC+H G VEEG YF+ M Y I P +
Sbjct: 357 GHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMI 416
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H+GCMVDLL RAG L+EA + + +M IE +A+IW LLG+CRV+ NVEL LA ERL +L
Sbjct: 417 HHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKL 476
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCL 549
++V+LSNIY G W ++ M D G +K G S IE ++ ++ L
Sbjct: 477 RRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFL 532
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 50/376 (13%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+LE K + +V+ G E + ++ +I + + AR +F + +++VVSW+A
Sbjct: 125 RLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSA 184
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GYA+ R + + Q+ D MP +K V N + G +KNG
Sbjct: 185 LTAGYAR----RGELGVARQI--FDEMP--------VKDLVSWNVMITG------YVKNG 224
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+E A +F E E++VV W +MI GY+ G+ A +FE
Sbjct: 225 -------------------EMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFE 265
Query: 191 ----LAPERDVILWNTIVSGYIDVRNMIEARKL---FDQMPKKD--VISWNTMLSGYANN 241
+ D + +++S D+ ++ RKL +M + D V+ N ++ YA
Sbjct: 266 EMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKC 325
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G +E ++F++M E++V +WN +IGG A +G E + F M + PN+ T V V
Sbjct: 326 GSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGV 385
Query: 302 LSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
+ AC+ G ++ ++ + E + N+ ++D+ + G++ A ++ M+ +
Sbjct: 386 IVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEP 445
Query: 360 DLITWNTIISGLAMHG 375
+ I W T++ +HG
Sbjct: 446 NAIIWRTLLGACRVHG 461
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 325/600 (54%), Gaps = 68/600 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSG-LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
+Q + K L I ++ SG + SD +++ ++ ++YA K+FD+ + N W
Sbjct: 11 KQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLW 70
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
A+ +G+ +N + F +M + + +P FT VLK+ ++ +++G+ ++ L ++
Sbjct: 71 TALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVR 130
Query: 129 NGFRANIFVGTALIEL-------------------------------YSTGKAIEAAYKV 157
G+ ++ V +IEL Y ++ A K+
Sbjct: 131 CGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKL 190
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F M+ERNV+ WTSMI GY+ GD++ AR LFE PE+D+ W +VS Y+ V N++ AR
Sbjct: 191 FDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAAR 250
Query: 218 KLFDQMPKKDVISWNTMLSG-------------------------------YANNGDVEE 246
LF+ MP DV +WN M+SG Y GDV+
Sbjct: 251 NLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDA 310
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ +F++MPE+N+ +W+ +IGGYA G + L +K +G + P++ + ++SAC+
Sbjct: 311 ARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQG-IKPDETFALGIISACS 369
Query: 307 RLGALDFSKWVHVYAEYNGYQ--GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
+LG D ++ V ++ G N+ V +LIDMYAKCG IE AV VF +D KDL +
Sbjct: 370 QLGVPDTAE--SVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCY 427
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+T+I+ A HG A+SLF EM+ A PDG+ F+G+L AC H GLV EG F+ M
Sbjct: 428 STVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMID 487
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+Y I P +HY CMVD+L RAG L EA + MP+ +A +W LL +CRV+ NV+LAE
Sbjct: 488 EYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAE 547
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A L ++EP N N+V+L NIY D G+W D ++++ +R+ +K G S IE+ V+
Sbjct: 548 AAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVI 607
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/576 (35%), Positives = 327/576 (56%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ L QIQ+Q+ GLE +++ CA L + YA K+F+ + D ++ +N
Sbjct: 154 KSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNV 213
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M YA+ R V++LF Q+++ P+ FT+P VLK+ + +R+GE++ ++K G
Sbjct: 214 MVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTG 273
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
+ +V +LI++Y +E A K+F EM R+ V W MI+GY+ C A F
Sbjct: 274 MDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFR 333
Query: 190 -------ELAPERDVI-------------------------------LWNTIVSGYIDVR 211
E E V+ + N ++ Y
Sbjct: 334 EMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCG 393
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ AR +FD+M K+VI W +M+SGY N GD+ E + LF++ P R+V W +I GY
Sbjct: 394 CLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQ 453
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F + + F+ M + RV P+ T+VT+L+ CA+LGAL+ KW+H Y + N +V
Sbjct: 454 FHHFDDAVALFREMQIQ-RVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVV 512
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG ALI+MY+KCG ++ ++++F ++ KD +W +II GLAM+G+ + AL LF EM+ G
Sbjct: 513 VGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVG 572
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD ITFIG+L AC+H GLVEEG +F SM + I P++EHYGC++DLL RAG L EA
Sbjct: 573 AKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEA 632
Query: 452 VDFVKRMPIEADAVI---WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
+ ++ +PIE ++ + LL +CR++ NV++ E ++L +E + + +L+NIY
Sbjct: 633 EELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIY 692
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ RW+D +++ M++ G KK+PGCS IEV+ +V
Sbjct: 693 ASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIV 728
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 189/387 (48%), Gaps = 45/387 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + +++ +V +G++ +Y+ +I +L + A+K+FD++T ++ VSWN M
Sbjct: 256 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 315
Query: 72 FNGYAQNEFHRTVVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN- 129
+GY + + F +M++ + P+ T L +C + L G+E+H V K
Sbjct: 316 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKEL 375
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF I AL+++Y+ + A +F EM +NV+ WTSMI+GYI+CGD+ AR LF
Sbjct: 376 GFTTRI--DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLF 433
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVE 245
+ +P RDV+LW +++GY+ + +A LF +M K D + T+L+G A G +E
Sbjct: 434 DKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALE 493
Query: 246 ECK-----------------------------------RLFEEMPERNVFSWNGLIGGYA 270
+ K +F E+ +++ SW +I G A
Sbjct: 494 QGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA 553
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGN 329
NG E L F M G P+D T + VLSAC+ G ++ ++ + + + +
Sbjct: 554 MNGKTSEALRLFSEMERVG-AKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 612
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSM 356
V +ID+ + G+++ A ++ +
Sbjct: 613 VEHYGCVIDLLGRAGLLDEAEELIQEI 639
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 193/428 (45%), Gaps = 48/428 (11%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L++C ++ L++ + + G R I A S G + A K+F + + ++
Sbjct: 150 LRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGN-LRYAEKIFNYVQDPSL 208
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQ 222
V+ M+ Y G + LF+ E D + ++ +R++ + K+
Sbjct: 209 FVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGF 268
Query: 223 MPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ K D +N+++ Y +VE K+LF+EM R+ SWN +I GY F +
Sbjct: 269 IVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDA 328
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNALI 337
++ F+ M EG P++AT+V+ LSAC L L+ +H Y G+ + NAL+
Sbjct: 329 INTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--DNALL 386
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG--RGA----------------- 378
DMYAKCG + A ++F+ M K++I W ++ISG G R A
Sbjct: 387 DMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTA 446
Query: 379 ------------GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
A++LF EM+ PD T + +L C +G +E+G + +
Sbjct: 447 MINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDEN 505
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I + ++++ ++ G + ++++ + + D W +++ C + N + +E A
Sbjct: 506 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSII--CGLAMNGKTSE-A 561
Query: 487 LERLTELE 494
L +E+E
Sbjct: 562 LRLFSEME 569
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 324/575 (56%), Gaps = 47/575 (8%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ L + Q++ GL ++I+ CA + YA++MFD+I N +N++
Sbjct: 2 RGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIR 61
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GY+ ++ V+LF +M PN FT P VLK+C +A E +H L +K G +
Sbjct: 62 GYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGS 121
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--- 190
+FV ALI +Y I A K+F ++ ++ +V W SMI GY G+ A LF
Sbjct: 122 LVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMR 181
Query: 191 ---LAPER---------------------------------DVILWNTIVSGYIDVRNMI 214
+ P+ D+I+ N +V Y N+
Sbjct: 182 EWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLH 241
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A+ +FD+ +K+V+SW +M+S YA +G +E +++F++MP +NV SWN +I Y G
Sbjct: 242 SAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQ 301
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ E LD F +M RV P++AT+V++L+AC++LG L K +H Y N V + N
Sbjct: 302 YREALDLFNKM-RNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYN 360
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
+LIDMYAKCG + A+D+F M K+L++WN II LA+HG G A+ LF EM+ G +P
Sbjct: 361 SLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLP 420
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D IT G+L AC+H GLV+ GL YF M + Y + +IEHY CMVDLL R G L EA++
Sbjct: 421 DEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIEL 480
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
+ RMP++ D V+W LLG+CR++ NVE+ + L++L ELEP + +V++SNIY + RW
Sbjct: 481 IGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRW 540
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCL 549
+DV +I+ M D G KK SSIE++ GC+
Sbjct: 541 EDVKKIRKLMIDRGIKKGRAISSIEID-----GCI 570
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 292/485 (60%), Gaps = 26/485 (5%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M Y+ + H VV+++ QM+ P+ F +PI++KS A G H VLK G
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS-----AGTGGIGFHAHVLKLG 55
Query: 131 FRANIFVGTALIELYSTGKA-----IEAAYK---------VFGEMDERNVVVWTSMINGY 176
++ FV A+I++Y+ A + +K +F M ERNV+ WT+M+ GY
Sbjct: 56 HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM--PKKDVISWNTM 234
D+ +AR F+ PER V+ WN ++SGY EA +LFD+M ++ ++WN M
Sbjct: 116 AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAM 175
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+S Y GD++ ++LF MP RNV +WN +I GYA NG ++ FK M+T ++ P+
Sbjct: 176 ISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPD 235
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ T+V+V+SAC LGAL+ WV + N + ++ NA+I MY++CG +E+A VF
Sbjct: 236 EVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQ 295
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M T+D++++NT+ISG A HG G A++L MK G PD +TFIG+L AC+H GL+EE
Sbjct: 296 EMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEE 355
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G F+S+ P I+HY CMVDLL R G L +A ++RMP+E A ++ +LL +
Sbjct: 356 GRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNAS 410
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++K VEL ELA +L ELEP N NF++LSNIY GRWKDV RI+ AM+ G KK G
Sbjct: 411 RIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTG 470
Query: 535 CSSIE 539
S +E
Sbjct: 471 WSWVE 475
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 57/329 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T A++K + AR+ FD + +++VVSWNAM +GYAQN + LF +M L A N
Sbjct: 111 MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM--LGAYRN 168
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ A+I Y +++A K+F
Sbjct: 169 SVTW-----------------------------------NAMISAYMRVGDLDSARKLFN 193
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-------ELAPERDVILWNTIVS-----GY 207
M RNVV W SMI GY G A LF +L P+ ++ +++S G
Sbjct: 194 TMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMV--SVISACGHLGA 251
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+++ N + R L + K + N M+ Y+ G +E+ KR+F+EM R+V S+N LI
Sbjct: 252 LELGNWV-VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLIS 310
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+A +G E ++ M EG + P+ T + VL+AC+ G L+ + V +
Sbjct: 311 GFAAHGHGVEAINLMSTM-KEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAID 369
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSM 356
C ++D+ + G +E+A M
Sbjct: 370 HYAC----MVDLLGRVGELEDAKRTMERM 394
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/533 (37%), Positives = 308/533 (57%), Gaps = 36/533 (6%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFN 73
+ L QI + SG++ Y ++I CA + YAR++ + + +N +
Sbjct: 186 RALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 245
Query: 74 GYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY++ +E H +V V M+K P+ F+F V+K+ +LR G ++HC LK+G
Sbjct: 246 GYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLD 305
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++FV T LI +Y GE CG + AR +F+
Sbjct: 306 SHLFVATTLIGMY-------------GE------------------CGCVGFARKVFDEM 334
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P+ +++ WN +V+ ++ AR++FD+M ++ SWN ML+GY G++E KR+F
Sbjct: 335 PQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFS 394
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMP R+ SW+ +I G+++NG F E F+ +L + PN+ ++ VLSAC++ GA +
Sbjct: 395 EMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELL-RAEMRPNEVSLTGVLSACSQSGAFE 453
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGL 371
F K +H + E +GY V V NALIDMY++CG + A VF M K +++W ++I+GL
Sbjct: 454 FGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGL 513
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG G A+ +F+EM +G MPD I+FI +L AC+H GL++EG YF M Y I P
Sbjct: 514 AMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPA 573
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGCMVDL R+G+L +A F+ +MPI A++W LLG+C + N+ELAE +RL
Sbjct: 574 VEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLN 633
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P N + V+LSN+Y G+WKDVA I+ +M KK+ S +EV + +
Sbjct: 634 ELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTM 686
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 300/536 (55%), Gaps = 40/536 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ Q +M A + F+ +T++NVVSWN M GY ++ + LF ++ PN
Sbjct: 179 MLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPN----PN 234
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ +L K + E EL N+ A+I Y ++ A K+F
Sbjct: 235 AVSWVTMLCGLAKYGKMAEAREL----FDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFK 290
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAP-------------------------- 193
+M ++ V WT++INGYI G + AR ++ P
Sbjct: 291 KMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQM 350
Query: 194 -----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
DV+ WN++++GY M EA LF QMP K+ +SWNTM+SGYA G ++
Sbjct: 351 FSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRAT 410
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ M E+N+ SWN LI G+ N L+ + L + M EG+ P+ +T LSACA L
Sbjct: 411 EIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKK-PDQSTFACTLSACANL 469
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL +H Y +GY ++ VGNALI MYAKCG +++A VF ++ DLI+WN++I
Sbjct: 470 AALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLI 529
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SG A++G A F +M + +PD +TFIG+L AC+H GL +GL F+ M D++I
Sbjct: 530 SGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAI 589
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P EHY C+VDLL R GRL EA + V+ M ++A+A +W +LLG+CRV+KN+EL A E
Sbjct: 590 EPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAE 649
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RL ELEP N +N++ LSN++ + GRW++V R+++ MR K PGCS IEV +
Sbjct: 650 RLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQI 705
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 195/384 (50%), Gaps = 22/384 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ ++ AR++FD+++ +N+VSWN M GY N LF M + D
Sbjct: 54 MISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDN--- 110
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
F++ +++ + L + EL LV + + A+I Y+ A KVF
Sbjct: 111 -FSWALMITCYTRKGKLEKARELLELVPD---KLDTACWNAMIAGYAKKGQFNDAKKVFE 166
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M +++V + SM+ GY G + A FE ER+V+ WN +V+GY+ ++ A +L
Sbjct: 167 QMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQL 226
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+++P + +SW TML G A G + E + LF+ MP +NV SWN +I Y + E +
Sbjct: 227 FEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAV 286
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ-GNVCVGNALID 338
FK+M + V + T+++ R+G LD ++ V YN ++ AL+
Sbjct: 287 KLFKKMPHKDSV-----SWTTIINGYIRVGKLDEARQV-----YNQMPCKDITAQTALMS 336
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
+ G I+ A +F+ + D++ WN++I+G + GR AL+LF +M + + ++
Sbjct: 337 GLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMP----IKNSVS 392
Query: 399 FIGILCACTHMGLVEEGLSYFQSM 422
+ ++ G ++ FQ+M
Sbjct: 393 WNTMISGYAQAGQMDRATEIFQAM 416
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 206/460 (44%), Gaps = 62/460 (13%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R I +L ++ A ++F +T +N+V++N+M + A+N R LF QM
Sbjct: 22 RQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMS------ 75
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
L++ V N + G Y +E A ++F
Sbjct: 76 --------LRNLVSWNTMIAG-------------------------YLHNNMVEEASELF 102
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER-DVILWNTIVSGYIDVRNMIEAR 217
M ER+ W MI Y G + AR L EL P++ D WN +++GY +A+
Sbjct: 103 DVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAK 162
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
K+F+QMP KD++S+N+ML+GY NG + + FE M ERNV SWN ++ GY +G
Sbjct: 163 KVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSS 222
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
F+++ PN + VT+L A+ G + ++ + NV NA+I
Sbjct: 223 AWQLFEKIPN-----PNAVSWVTMLCGLAKYGKMAEARELFDRMP----SKNVVSWNAMI 273
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
Y + ++ AV +F M KD ++W TII+G G+ A ++++M D
Sbjct: 274 ATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMP----CKDIT 329
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
++ G ++E F + + + M+ +R+GR+ EA++ ++
Sbjct: 330 AQTALMSGLIQNGRIDEADQMFSRIGAHDVVC-----WNSMIAGYSRSGRMDEALNLFRQ 384
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
MPI+ ++V W ++ Y + A E + KN
Sbjct: 385 MPIK-NSVSWNTMISG---YAQAGQMDRATEIFQAMREKN 420
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+Q+ ++ SG ++ +I A+ ++ A ++F I +++SWN++ +GYA N
Sbjct: 476 NQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALN 535
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ F QM +P+ TF +L +C +G ++ ++++ F
Sbjct: 536 GYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIED------FAI 589
Query: 139 TALIELYS--------TGKAIEAAYKVFGEMDERNVVVWTSM-----INGYISCGDIVSA 185
L E YS G+ EA V G + N +W S+ ++ + G +
Sbjct: 590 EPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAE 649
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNM 213
R LFEL P S YI + NM
Sbjct: 650 R-LFELEPHN--------ASNYITLSNM 668
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 328/584 (56%), Gaps = 50/584 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITDQNVV 66
E ++ K QI Q + +GL + R+I+ + L + ++R +F +I N+
Sbjct: 17 ESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLF 76
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN M GY++++ R +VL+ M K A PN FTFP +L SC ++++L G E+H
Sbjct: 77 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 136
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
++K+GF +++FV ALI LYS + A +F E R++V + +MI GY SA
Sbjct: 137 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 196
Query: 186 RCLFE------LAPER-----------------------------------DVILWNTIV 204
CLF + P+ +++L + IV
Sbjct: 197 LCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIV 256
Query: 205 SGYIDVRNMIEARKLFDQM-PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
Y + A ++F M K +W++M+ GYA G++ ++LF M ER+V SW
Sbjct: 257 DMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWT 316
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV-HVYAE 322
+I GY+ G E L+ FK M G + P++ T+V VLSACARLGA D K + H Y E
Sbjct: 317 AMISGYSQAGQCSEALELFKEMEALG-IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIE 375
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM--DTKDLITWNTIISGLAMHGRGAGA 380
+ N + A++DMYAKCG I++A+++F + + K +N++I+GLA HG G A
Sbjct: 376 NGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETA 435
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
+++F E+ + G PD +TF+G+LCAC H GL+EEG F+SM Y I PQ+EHYGCMVD
Sbjct: 436 ITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVD 495
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL R G L EA D V++MP EA++VIW LL +CR + NV++ E+A ++L E+E ++ A
Sbjct: 496 LLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGAR 555
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+LSNI D +W++ +++ M D G +K PG S IE+ +
Sbjct: 556 YVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAI 599
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/524 (37%), Positives = 307/524 (58%), Gaps = 43/524 (8%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++ AR +F+++ +++VVSWNAM +G+AQN F +F QM + N ++ +L +
Sbjct: 138 LSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSA 193
Query: 110 CVKINALREGEEL------------HCLV--------------------LKNGFRANIFV 137
V+ + + L +CL+ +++ NI
Sbjct: 194 YVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNI-- 251
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
+I Y+ + A ++F E+ R+V WT+M++G++ G + A +FE PE++
Sbjct: 252 ---MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNE 308
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ WN +++GY+ + + +AR+LFDQMP ++ SWNTM++GYA G++++ K LF+EMP+R
Sbjct: 309 VSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR 368
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+ SW +I GYA +G E L F +M +G + N + + LS+CA + AL+ K +
Sbjct: 369 DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL-NRSALACALSSCAEIAALELGKQL 427
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H G+Q GNAL+ MY KCG IE A DVF + KD+++WNT+I+G A HG G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL+LF MK + PD +T +G+L AC+H G V++G+ YF SM +Y I +HY C
Sbjct: 488 KEALALFESMKMTIK-PDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTC 546
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
M+DLL RAGRL EA++ +K MP DA W LLG+ R++ + EL E A E++ E+EP N
Sbjct: 547 MIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+V+LSN+Y GRW++V ++ MRD G KK+PG S +E+
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQ 650
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 197/420 (46%), Gaps = 50/420 (11%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
ARK+F+K+ D++++SWN M +GY +N LF QM + K V
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE--------------KDVVS 155
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
NA+ G +NGF +E A K+F +M +N + W +
Sbjct: 156 WNAMLSG------FAQNGF-------------------VEEARKIFDQMLVKNEISWNGL 190
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
++ Y+ G I AR LF+ + +++ WN ++ GY+ + + +AR LFD+MP +D ISWN
Sbjct: 191 LSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWN 250
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
M++GYA NG + E +RLFEE+P R+VF+W ++ G+ NG+ E F+ M + V
Sbjct: 251 IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
N V S K ++ + N N ++ YA+CG I+ A +
Sbjct: 311 WNAMIAGYVQSQ-------QIEKARELFDQMPSR--NTSSWNTMVTGYAQCGNIDQAKIL 361
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M +D I+W +ISG A G+ AL LF +MK G + + L +C + +
Sbjct: 362 FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAAL 421
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
E G + I ++ + + G + EA D + + E D V W ++
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAG-NALLAMYGKCGSIEEAFDVFEDI-TEKDIVSWNTMIA 479
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 25/333 (7%)
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
I Y E+A VF M R+ V + +MI+GY+S AR +FE P+RD+I WN
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++SGY+ N+ AR LF+QMP+KDV+SWN MLSG+A NG VEE +++F++M +N S
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEIS 186
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT---VLSACARLGALDFSKWVH 318
WNGL+ Y NG + DA R L + ++ D IV+ ++ R LD ++ +
Sbjct: 187 WNGLLSAYVQNG---RIEDA--RRLFDSKM---DWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ N +I YA+ G++ A +F + +D+ W ++SG +G
Sbjct: 239 DRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
A +F EM E +++ ++ +E+ F M + M
Sbjct: 295 EATRIFEEMPEKNE----VSWNAMIAGYVQSQQIEKARELFDQMP-----SRNTSSWNTM 345
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V A+ G + +A MP + D + WA ++
Sbjct: 346 VTGYAQCGNIDQAKILFDEMP-QRDCISWAAMI 377
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 181/366 (49%), Gaps = 22/366 (6%)
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+ ++V W I+ Y+ G SA +F R + +N ++SGY+ ARK+F++
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP +D+ISWN MLSGY NG++ + LF +MPE++V SWN ++ G+A NG E F
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF 176
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ML + N+ + +LSA + G ++ ++ ++ ++ + N L+ Y +
Sbjct: 177 DQMLVK-----NEISWNGLLSAYVQNGRIEDAR--RLFDSKMDWE--IVSWNCLMGGYVR 227
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
+++A +F+ M +D I+WN +I+G A +G + A LF E+ + D + +
Sbjct: 228 KKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELP----IRDVFAWTAM 283
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ G+++E F+ M + + M+ ++ ++ +A + +MP
Sbjct: 284 VSGFVQNGMLDEATRIFEEMPEKNEV-----SWNAMIAGYVQSQQIEKARELFDQMP-SR 337
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+ W ++ N++ A++ + E+ ++ ++ + + Y G+ ++ + +
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFD---EMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 523 AMRDTG 528
M+ G
Sbjct: 395 KMKRDG 400
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 52/292 (17%)
Query: 23 TQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF---------- 72
T++ EK++ +I Q +Q+ AR++FD++ +N SWN M
Sbjct: 297 TRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNID 356
Query: 73 ---------------------NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+GYAQ+ + LF +MK+ + N L SC
Sbjct: 357 QAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCA 416
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+I AL G++LH ++K GF+ G AL+ +Y +IE A+ VF ++ E+++V W +
Sbjct: 417 EIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNT 476
Query: 172 MINGYISCGDIVSARCLFE-----LAPERDVILWNTIV----SGYIDVRNMIEARKLFDQ 222
MI GY G A LFE + P+ DV L + +G++D + + F+
Sbjct: 477 MIAGYARHGFGKEALALFESMKMTIKPD-DVTLVGVLSACSHTGFVD-----KGMEYFNS 530
Query: 223 MPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
M + I+ N M+ G ++E L + MP + +W L+G
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 50/254 (19%)
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+E++ + D++ WN +S Y G E +F M R+ ++N +I GY +N
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNN 105
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
F F++M P+ D W
Sbjct: 106 KFDCARKVFEKM-------PDR----------------DLISW----------------- 125
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
N ++ Y K G + A +FN M KD+++WN ++SG A +G A +F +M E
Sbjct: 126 NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNE- 184
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
I++ G+L A G +E+ F S MD+ IV + C++ R RL +A
Sbjct: 185 ---ISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVS----WNCLMGGYVRKKRLDDARS 236
Query: 454 FVKRMPIEADAVIW 467
RMP+ D + W
Sbjct: 237 LFDRMPVR-DKISW 249
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 25/230 (10%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITA----CAQLKQMTYARKMFDKITDQNVVS 67
LE K LH ++V +G + + YI + A C +++ A +F+ IT++++VS
Sbjct: 421 LELGKQLH---GRLVKAGFQ-TGYIAGNALLAMYGKCGSIEE---AFDVFEDITEKDIVS 473
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GYA++ F + + LF M K+ P+ T VL +C + +G E +
Sbjct: 474 WNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMY 532
Query: 128 KN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI--- 182
+N G AN T +I+L ++ A + M + W +++ GD
Sbjct: 533 QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Query: 183 -VSARCLFELAPERD---VILWNTIVSG--YIDVRNMIEARKLFDQMPKK 226
+A +FE+ P+ V+L N + + +VR M K+ D+ KK
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREM--RSKMRDKGVKK 640
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 307/571 (53%), Gaps = 40/571 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q + K L + Q++ GL ++++ C Q + YA +FD+I N +N
Sbjct: 47 DQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYN 106
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ GY+ + ++LF QM MPN FTFP VLK+C E +H +K
Sbjct: 107 HLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKL 166
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G + V A++ Y + I +A +VF ++ +R +V W SMI GY G A LF
Sbjct: 167 GMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLF 226
Query: 190 E----LAPERDV-----------------------------------ILWNTIVSGYIDV 210
+ L E DV I+ N ++ Y
Sbjct: 227 QEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKC 286
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
++ A+ +FDQM KDV+SW +M++ YAN G VE ++F MP +NV SWN +I
Sbjct: 287 GHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLV 346
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G + E ++ F RM G V P+DAT+V++LS C+ G L K H Y N +V
Sbjct: 347 QEGQYTEAVELFHRMCISG-VMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSV 405
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ N+LIDMYAKCG ++ A+D+F M K++++WN II LA+HG G A+ +F M+ +
Sbjct: 406 TLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQAS 465
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD ITF G+L AC+H GLV+ G YF M + I P +EHY CMVDLL R G L E
Sbjct: 466 GLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGE 525
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A+ +++MP++ D V+W LLG+CR+Y N+E+A+ +++L EL N +V+LSN+Y +
Sbjct: 526 AMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSE 585
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW D+ +I+ M D+G KK S IE++
Sbjct: 586 SQRWDDMKKIRKIMDDSGIKKCRAISFIEID 616
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P T+ +L C+ + L K VH +G V L+ + + G + A +
Sbjct: 37 PTHQTLHHLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLL 93
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
F+ + + +N +I G + +L LF +M +AG MP+ TF +L AC
Sbjct: 94 FDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACA 148
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 325/573 (56%), Gaps = 67/573 (11%)
Query: 33 SDYITPR--IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
S++I R +IT ++L Q+ AR +FD++ D+N++SWN++ GY QN+ + +F +
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 91 MKK-------------------------LDAMP--NCFTFPIVLKSCVKINALREGEELH 123
M + D MP N ++ +++ VK + E E L
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLF 214
Query: 124 C-LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
+ KN + +G L E G+ I+ A ++F M E++VV T+MI GY G +
Sbjct: 215 WQMPEKNVVSWTVMLGGLLQE----GR-IDEACRLFDMMPEKDVVTRTNMIGGYCQVGRL 269
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN-- 240
V AR LF+ P R+V+ W T+++GY+ + + ARKLF+ MP+K+ +SW ML GY N
Sbjct: 270 VEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCG 329
Query: 241 -----------------------------NGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
NG+V + +++F++M E++ +W+ +I Y
Sbjct: 330 RLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
GL + L+ F+ M EG + PN ++++VLS CA L LD + +H + + +V
Sbjct: 390 KGLELDALELFRMMQREG-IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V + L+ MY KCG + A VF+ KD++ WN+II+G A HG G AL +FH+M +G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
MPD +TF+G+L AC++ G V++GL F SM Y + +IEHY CMVDLL RAG+L EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+D +++MP+EADA+IW LLG+CR + ++LAE+A ++L LEPKN F++LSNIY
Sbjct: 569 MDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQ 628
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW DVA ++ MRD K PGCS I V + V
Sbjct: 629 GRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKV 661
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 179/402 (44%), Gaps = 58/402 (14%)
Query: 125 LVLKNGFRANIFVG-TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
LVL + +N + +LI YS IE A VF EM ++N++ W S++ GY
Sbjct: 87 LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A+ +F+ ER+ I WN +VSGYI+ + EAR++FD+MP+++V+SW M+ GY G
Sbjct: 147 EAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM------------------ 285
+ E + LF +MPE+NV SW ++GG G E F M
Sbjct: 207 ISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV 266
Query: 286 --LTEGRVF------PNDATIVTVLSACARLGALDFS-KWVHVYAEYN---------GYQ 327
L E R+ N + T+++ + +D + K V E N GY
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 328 G-----------------NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+V NA+I + + G + A VF+ M KD TW+ +I
Sbjct: 327 NCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIV 429
G AL LF M+ G P+ + I +L C + ++ G + Q + + +
Sbjct: 387 YERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDL- 445
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ ++ + + G LA+A R ++ D V+W +++
Sbjct: 446 -DVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSII 485
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 36/382 (9%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK +I Q+ ++ AR +FD++ +NVVSW M GY QN+ LF
Sbjct: 250 EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEV 309
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGK 149
M + N ++ +LK L E EL + + +K ++ A+I +
Sbjct: 310 MPE----KNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNG 360
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-----TIV 204
+ A +VF +M E++ W++MI Y G + A LF + +R+ I N +++
Sbjct: 361 EVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMM-QREGIRPNFPSLISVL 419
Query: 205 SGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
S + N+ R++ Q+ + DV + +LS Y G++ + K++F+ ++V
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSK 315
WN +I GYA +GL E L F M G + P+D T V VLSAC+ G + F+
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSG-IMPDDVTFVGVLSACSYTGNVKKGLEIFNS 538
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
Y + C ++D+ + G + A+D+ M + D I W ++ H
Sbjct: 539 METKYQVEQKIEHYAC----MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594
Query: 375 -----GRGAGALSLFHEMKNAG 391
A L E KNAG
Sbjct: 595 MKLDLAEVAAKKLLVLEPKNAG 616
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 134/324 (41%), Gaps = 54/324 (16%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L H +I Q+V S + Y+ +++ + + A+++FD+ ++VV WN++
Sbjct: 425 LANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI 484
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYAQ+ + +F M MP+ TF VL +C +++G
Sbjct: 485 ITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKG------------ 532
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+E++++ +E Y+V E+ + + M++ G + A L E
Sbjct: 533 ----------LEIFNS---METKYQV-----EQKIEHYACMVDLLGRAGKLNEAMDLIEK 574
Query: 192 AP-ERDVILWNTIVSG-----YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
P E D I+W ++ +D+ + A+KL P K+ + + + YA+ G +
Sbjct: 575 MPMEADAIIWGALLGACRTHMKLDLAE-VAAKKLLVLEP-KNAGPFILLSNIYASQGRWD 632
Query: 246 ECKRLFEEMPERNVF-----SW-----------NGLIGGYANNGLFFEVLDAFKRMLTEG 289
+ L M +R V SW G G+ + +L+ +L E
Sbjct: 633 DVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREA 692
Query: 290 RVFPNDATIVTVLSACARLGALDF 313
+P+ + ++ + ++ +L++
Sbjct: 693 GYYPDQSFVLHDVDEEEKVQSLEY 716
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/515 (37%), Positives = 300/515 (58%), Gaps = 24/515 (4%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVL---- 107
AR++FD + +++VVSWN++ +GYAQN + +F M + +++ N V
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRI 189
Query: 108 -KSCVKINALREGEELHCLVLKNGFRANIFVGTA-----------------LIELYSTGK 149
++C+ + + + + L GF +G A +I Y+ G
Sbjct: 190 EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGG 249
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A ++F E R+V WT+M++GY+ G + A+ F+ PE++ + +N +++GY+
Sbjct: 250 GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQ 309
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ M AR+LF+ MP +++ SWNTM++GY GD+ + ++ F+ MP+R+ SW +I GY
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
A +G + E L+ F + +G N AT LS CA + AL+ K +H A GY
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESL-NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
VGNAL+ MY KCG I+ A D F ++ KD+++WNT+++G A HG G AL++F MK
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
AG PD IT +G+L AC+H GL++ G YF SM DY ++P +HY CM+DLL RAGRL
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLE 548
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA D ++ MP + A W LLG+ R++ N EL E A E + ++EP+N +V+LSN+Y
Sbjct: 549 EAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 608
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW D +++ MRD G +K+PG S +EV +
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKI 643
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 210/425 (49%), Gaps = 31/425 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +F+ + ++ VS+NAM +GY +N LF QM + D F++ ++L V+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERD----LFSWNVMLTGYVR 123
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
L + L L+ + ++ +L+ Y+ ++ A +VF M E+N + W +
Sbjct: 124 NCRLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGL 179
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
+ Y+ G I A LFE + D+I WN ++ G++ + + +AR LFD+MP +D ISWN
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
TM+SGYA G + + +RLF+E P R+VF+W ++ GY NG+ E F M +
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK---- 295
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
N+ + +++ + +D ++ + N+ N +I Y + G I A
Sbjct: 296 -NEVSYNAMIAGYVQTKKMDIARELFESMPCR----NISSWNTMITGYGQIGDIAQARKF 350
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M +D ++W II+G A G AL++F E+K GE + TF L C + +
Sbjct: 351 FDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAAL 410
Query: 413 EEGLS-YFQSMAMDYSIVPQIEHYGCMVD--LLA---RAGRLAEAVDFVKRMPIEADAVI 466
E G + Q++ M Y GC V LLA + G + EA D + + E D V
Sbjct: 411 ELGKQIHGQAVKMGYGT-------GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVS 462
Query: 467 WANLL 471
W +L
Sbjct: 463 WNTML 467
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 171/354 (48%), Gaps = 26/354 (7%)
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
++A VF M R+ V + +MI+GY+ AR LF+ PERD+ WN +++GY+
Sbjct: 66 DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC 125
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ +AR+LFD MP+KDV+SWN++LSGYA NG V+E + +F+ MPE+N SWNGL+ Y +
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG E +L E + + + ++ R L ++W+ +
Sbjct: 186 NGRIEEAC-----LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAI 236
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
N +I YA+ G + A +F+ T+D+ TW ++SG +G A + F EM
Sbjct: 237 SWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
E +++ ++ ++ F+SM I + M+ + G +A+A
Sbjct: 297 E----VSYNAMIAGYVQTKKMDIARELFESMP-----CRNISSWNTMITGYGQIGDIAQA 347
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL----EPKNPANF 501
F MP + D V WA ++ Y E AL E+ E N A F
Sbjct: 348 RKFFDMMP-QRDCVSWAAIIAG---YAQSGHYEEALNMFVEIKQDGESLNRATF 397
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 41/278 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN----------------- 73
EK++ +I Q K+M AR++F+ + +N+ SWN M
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 74 --------------GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
GYAQ+ + + +F ++K+ N TF L +C I AL G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++H +K G+ FVG AL+ +Y +I+ A F ++E++VV W +M+ GY
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 180 GDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----S 230
G A +FE + D I ++S + + F M K +
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 231 WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
+ M+ G +EE + L MP + SW L+G
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLG 571
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 38/143 (26%)
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L + GL++ G YF M +YS+ P +HY CM+DLL R RL E
Sbjct: 770 FLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGA--------- 820
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
LLG+ R++ N EL E A + ++ P+N +++
Sbjct: 821 --------LLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISK-- 853
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
MRD G +K+PG S EV +
Sbjct: 854 --MRDVGVQKVPGYSWFEVQNKI 874
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI Q V G ++ ++ + + A F+ I +++VVSWN M GYA++
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
F R + +F MK P+ T VL +C L G E + K+ G
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L +E A + M + W S I+G G+ +A +F++
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE-KAAEMVFKME 593
Query: 193 PE 194
P+
Sbjct: 594 PQ 595
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 325/573 (56%), Gaps = 67/573 (11%)
Query: 33 SDYITPR--IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
S++I R +IT ++L Q+ AR +FD++ D+N++SWN++ GY QN+ + +F +
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 91 MKK-------------------------LDAMP--NCFTFPIVLKSCVKINALREGEELH 123
M + D MP N ++ +++ VK + E E L
Sbjct: 155 MSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLF 214
Query: 124 C-LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
+ KN + +G L E G+ I+ A ++F M E++VV T+MI GY G +
Sbjct: 215 WQMPEKNVVSWTVMLGGLLQE----GR-IDEACRLFDMMPEKDVVTRTNMIGGYCQVGRL 269
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN-- 240
V AR LF+ P R+V+ W T+++GY+ + + ARKLF+ MP+K+ +SW ML GY N
Sbjct: 270 VEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCG 329
Query: 241 -----------------------------NGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
NG+V + +++F++M E++ +W+ +I Y
Sbjct: 330 RLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYER 389
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
GL + L+ F+ M EG + PN ++++VLS CA L LD + +H + + +V
Sbjct: 390 KGLELDALELFRMMQREG-IRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V + L+ MY KCG + A VF+ KD++ WN+II+G A HG G AL +FH+M +G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
MPD +TF+G+L AC++ G V++GL F SM Y + +IEHY CMVDLL RAG+L EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+D +++MP+EADA+IW LLG+CR + ++LAE+A ++L LEPKN F++LSNIY
Sbjct: 569 MDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQ 628
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW DVA ++ MRD K PGCS I V + V
Sbjct: 629 GRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKV 661
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 179/402 (44%), Gaps = 58/402 (14%)
Query: 125 LVLKNGFRANIFVG-TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
LVL + +N + +LI YS IE A VF EM ++N++ W S++ GY
Sbjct: 87 LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A+ +F+ ER+ I WN +VSGYI+ + EAR++FD+MP+++V+SW M+ GY G
Sbjct: 147 EAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM------------------ 285
+ E + LF +MPE+NV SW ++GG G E F M
Sbjct: 207 ISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV 266
Query: 286 --LTEGRVF------PNDATIVTVLSACARLGALDFS-KWVHVYAEYN---------GYQ 327
L E R+ N + T+++ + +D + K V E N GY
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 328 G-----------------NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+V NA+I + + G + A VF+ M KD TW+ +I
Sbjct: 327 NCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIV 429
G AL LF M+ G P+ + I +L C + ++ G + Q + + +
Sbjct: 387 YERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDL- 445
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ ++ + + G LA+A R ++ D V+W +++
Sbjct: 446 -DVYVASVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSII 485
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 36/382 (9%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK +I Q+ ++ AR +FD++ +NVVSW M GY QN+ LF
Sbjct: 250 EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEV 309
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGK 149
M + N ++ +LK L E EL + + +K ++ A+I +
Sbjct: 310 MPE----KNEVSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNG 360
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-----TIV 204
+ A +VF +M E++ W++MI Y G + A LF + +R+ I N +++
Sbjct: 361 EVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMM-QREGIRPNFPSLISVL 419
Query: 205 SGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
S + N+ R++ Q+ + DV + +LS Y G++ + K++F+ ++V
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSK 315
WN +I GYA +GL E L F M G + P+D T V VLSAC+ G + F+
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSG-IMPDDVTFVGVLSACSYTGNVKKGLEIFNS 538
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
Y + C ++D+ + G + A+D+ M + D I W ++ H
Sbjct: 539 METKYQVEQKIEHYAC----MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594
Query: 375 -----GRGAGALSLFHEMKNAG 391
A L E KNAG
Sbjct: 595 MKLDLAEVAAKKLLVLEPKNAG 616
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 134/324 (41%), Gaps = 54/324 (16%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L H +I Q+V S + Y+ +++ + + A+++FD+ ++VV WN++
Sbjct: 425 LANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI 484
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYAQ+ + +F M MP+ TF VL +C +++G
Sbjct: 485 ITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKG------------ 532
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+E++++ +E Y+V E+ + + M++ G + A L E
Sbjct: 533 ----------LEIFNS---METKYQV-----EQKIEHYACMVDLLGRAGKLNEAMDLIEK 574
Query: 192 AP-ERDVILWNTIVSG-----YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
P E D I+W ++ +D+ + A+KL P K+ + + + YA+ G +
Sbjct: 575 MPMEADAIIWGALLGACRTHMKLDLAE-VAAKKLLVLEP-KNAGPFILLSNIYASQGRWD 632
Query: 246 ECKRLFEEMPERNVF-----SW-----------NGLIGGYANNGLFFEVLDAFKRMLTEG 289
+ L M +R V SW G G+ + +L+ +L E
Sbjct: 633 DVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREA 692
Query: 290 RVFPNDATIVTVLSACARLGALDF 313
+P+ + ++ + ++ +L++
Sbjct: 693 GYYPDQSFVLHDVDEEEKVQSLEY 716
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/533 (36%), Positives = 304/533 (57%), Gaps = 37/533 (6%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T LHQI Q++ L S IT ++I++ + K + ++ +F+ +N+ ++NA+
Sbjct: 92 KTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALI 151
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G N + F M + P+ T+P VLKS + + G +HC++L+ G
Sbjct: 152 RGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIE 211
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ FV +L+++Y + + +A+KVF E +
Sbjct: 212 LDSFVRVSLVDMYVKVEKLGSAFKVFDE-------------------------------S 240
Query: 193 PER-----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
PER +LWN ++ G +M +A KLF MPKK+ +SW+T++ G+A NGD++
Sbjct: 241 PERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRA 300
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF++MPE+NV SW ++ G++ NG + L F +ML EG V PN TIV+ LSACA+
Sbjct: 301 MELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEG-VRPNAFTIVSALSACAK 359
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+G L+ +H Y + NG +G AL+DMYAKCG IE+A +VF + K + TW +
Sbjct: 360 IGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVM 419
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I G A+HG A++ F +M AG PD + F+ +L AC H G V+ GL++F SM +DY
Sbjct: 420 IWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYC 479
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P ++HY +VD+L R+G+L EA+ F++RMP+ D VIW L +CR +K ++A+ AL
Sbjct: 480 IEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFAL 539
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+L +LEP + N++ LSN Y LG+W+D R++V M++ G K G S IEV
Sbjct: 540 NKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEV 592
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/515 (37%), Positives = 300/515 (58%), Gaps = 24/515 (4%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVL---- 107
AR++FD + +++VVSWN++ +GYAQN + +F M + +++ N V
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRI 189
Query: 108 -KSCVKINALREGEELHCLVLKNGFRANIFVGTA-----------------LIELYSTGK 149
++C+ + + + + L GF +G A +I Y+ G
Sbjct: 190 EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGG 249
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A ++F E R+V WT+M++GY+ G + A+ F+ PE++ + +N +++GY+
Sbjct: 250 GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQ 309
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ M AR+LF+ MP +++ SWNTM++GY GD+ + ++ F+ MP+R+ SW +I GY
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGY 369
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
A +G + E L+ F + +G N AT LS CA + AL+ K +H A GY
Sbjct: 370 AQSGHYEEALNMFVEIKQDGESL-NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
VGNAL+ MY KCG I+ A D F ++ KD+++WNT+++G A HG G AL++F MK
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
AG PD IT +G+L AC+H GL++ G YF SM DY ++P +HY CM+DLL RAGRL
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLE 548
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA D ++ MP + A W LLG+ R++ N EL E A E + ++EP+N +V+LSN+Y
Sbjct: 549 EAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYA 608
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW D +++ MRD G +K+PG S +EV +
Sbjct: 609 ASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKI 643
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 210/425 (49%), Gaps = 31/425 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +F+ + ++ VS+NAM +GY +N LF QM + D F++ ++L V+
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERD----LFSWNVMLTGYVR 123
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
L + L L+ + ++ +L+ Y+ ++ A +VF M E+N + W +
Sbjct: 124 NCRLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGL 179
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
+ Y+ G I A LFE + D+I WN ++ G++ + + +AR LFD+MP +D ISWN
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
TM+SGYA G + + +RLF+E P R+VF+W ++ GY NG+ E F M +
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK---- 295
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
N+ + +++ + +D ++ + N+ N +I Y + G I A
Sbjct: 296 -NEVSYNAMIAGYVQTKKMDIARELFESMPCR----NISSWNTMITGYGQIGDIAQARKF 350
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M +D ++W II+G A G AL++F E+K GE + TF L C + +
Sbjct: 351 FDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAAL 410
Query: 413 EEGLS-YFQSMAMDYSIVPQIEHYGCMVD--LLA---RAGRLAEAVDFVKRMPIEADAVI 466
E G + Q++ M Y GC V LLA + G + EA D + + E D V
Sbjct: 411 ELGKQIHGQAVKMGYGT-------GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVS 462
Query: 467 WANLL 471
W +L
Sbjct: 463 WNTML 467
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 171/354 (48%), Gaps = 26/354 (7%)
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
++A VF M R+ V + +MI+GY+ AR LF+ PERD+ WN +++GY+
Sbjct: 66 DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC 125
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ +AR+LFD MP+KDV+SWN++LSGYA NG V+E + +F+ MPE+N SWNGL+ Y +
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG E +L E + + + ++ R L ++W+ +
Sbjct: 186 NGRIEEAC-----LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAI 236
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
N +I YA+ G + A +F+ T+D+ TW ++SG +G A + F EM
Sbjct: 237 SWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
E +++ ++ ++ F+SM I + M+ + G +A+A
Sbjct: 297 E----VSYNAMIAGYVQTKKMDIARELFESMP-----CRNISSWNTMITGYGQIGDIAQA 347
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL----EPKNPANF 501
F MP + D V WA ++ Y E AL E+ E N A F
Sbjct: 348 RKFFDMMP-QRDCVSWAAIIAG---YAQSGHYEEALNMFVEIKQDGESLNRATF 397
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 41/278 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN----------------- 73
EK++ +I Q K+M AR++F+ + +N+ SWN M
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 74 --------------GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
GYAQ+ + + +F ++K+ N TF L +C I AL G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++H +K G+ FVG AL+ +Y +I+ A F ++E++VV W +M+ GY
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 180 GDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----S 230
G A +FE + D I ++S + + F M K +
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 231 WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
+ M+ G +EE + L MP + SW L+G
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLG 571
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI Q V G ++ ++ + + A F+ I +++VVSWN M GYA++
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
F R + +F MK P+ T VL +C L G E + K+ G
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L +E A + M + W S I+G G+ +A +F++
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE-KAAEMVFKME 593
Query: 193 PE 194
P+
Sbjct: 594 PQ 595
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/571 (35%), Positives = 315/571 (55%), Gaps = 46/571 (8%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITDQNVVSWNA 70
+ L+Q+ +V G+ D +T +I+ + L + YAR++FD+I D + +N+
Sbjct: 24 SVHRLNQLHAHLVVHGV---DDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNS 80
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ Y + + + L M + +PN FT P +LK+C ++ A H +V+K G
Sbjct: 81 LIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLG 140
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +FVG AL+ Y++ ++ + + F EM +RNVV W SMINGY G+ A LFE
Sbjct: 141 FVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFE 200
Query: 191 -------LAPER--------------------------------DVILWNTIVSGYIDVR 211
LA E D+IL N +V Y
Sbjct: 201 GMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCG 260
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+++ A FD MP K+ +SW +ML A ++ + FE++PE+++ SWN +I Y
Sbjct: 261 DLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQ 320
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
G F E LD + RM G + P++ T+ VLSAC +LG L K +H N + V
Sbjct: 321 GGRFHEALDLYNRMKLLG-LAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVA 379
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ N+L+DMYA+CG ++ A+ +F+ M +K++I+WN II LAMHGR AL F M +
Sbjct: 380 LFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDA 439
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD ITF+ +L AC H GL+E G YFQ+M Y++ P +EHY CMVDLL R G+LA+A
Sbjct: 440 FPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKA 499
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
VD +K MP+ D V+W LLG+CR++ ++++ + +++L ELE + FV++SN+ +
Sbjct: 500 VDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYET 559
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+W+D+ R++ MR+ G KK G SSIE N
Sbjct: 560 HQWEDMKRLRKLMREWGMKKNMGVSSIETNS 590
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 186/411 (45%), Gaps = 50/411 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+++ +H+ VV G ++ ++ + A + +R+ FD++ D+NVVSWN+
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M NGYAQ R LF M++ + + FT +L +C L G+ +H +L G
Sbjct: 182 MINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRG 241
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
R ++ + AL+++Y + A+ F M +N V WTSM+ I +AR FE
Sbjct: 242 CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFE 301
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-------------------------- 224
PE+ +I WN ++S Y+ EA L+++M
Sbjct: 302 QIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLAS 361
Query: 225 -------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
V +N++L YA G V+ LF EMP +NV SWN +IG A
Sbjct: 362 GKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAM 421
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGY 326
+G + L F+ M+++ P++ T V +LSAC G L+ F HVY G
Sbjct: 422 HGRAQDALMFFRSMVSDA-FPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGV 480
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGR 376
+ C ++D+ + G + AVD+ M + D++ W ++ +HG
Sbjct: 481 EHYAC----MVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGH 527
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/553 (37%), Positives = 296/553 (53%), Gaps = 72/553 (13%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
++D A T + L + V L +S Y+ +I+ C + +A ++F +I
Sbjct: 9 LEDAIIARLRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQI 68
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC--------FTFPIVLKSCVK 112
N+ NAM YAQN HR V ++ +M + P+ FT+P +LK+C
Sbjct: 69 PAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGA 128
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ A R G ++H V ++G E + VV S+
Sbjct: 129 LAASRLGRQVHAHVARSGC-------------------------------ESHAVVQNSL 157
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
I Y CGD+ +A RK FD M +KDV+SWN
Sbjct: 158 IEMYTRCGDLSTA-------------------------------RKAFDGMREKDVVSWN 186
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
T++S +A G + + LF MP++ V SW L+ GY G F ++ F+ M EG
Sbjct: 187 TLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEG-FE 245
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P+D +IV VL ACA+LGAL+ +W++ Y +G G V + NAL++MYAKCG IE A+ +
Sbjct: 246 PDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQL 305
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACTHMGL 411
F+ M KD+I+W+T I GLA HGR A+ LF M G MP+GITF+G+L AC+H GL
Sbjct: 306 FHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGL 365
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V+EGL Y M DY + P +EHYGC+VDLL R+GR+ A+D ++ MP+ D IW +LL
Sbjct: 366 VDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLL 425
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
+CR + +VE A +A ERL ELEP + N VML+N+YG GRW +VA + +R +K
Sbjct: 426 SACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRK 485
Query: 532 LPGCSSIEVNEVV 544
PGCS IEV+ VV
Sbjct: 486 TPGCSMIEVDNVV 498
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 327/576 (56%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ L QIQ+Q+ GLE +++ CA L + YA K+F+ + D ++ +N
Sbjct: 108 KSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNV 167
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M YA+ R V++LF Q+++ P+ FT+P VLK+ + +R+GE++ ++K G
Sbjct: 168 MVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTG 227
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
+ +V +LI++Y +E A K+F EM R+ V W MI+GY+ C A F
Sbjct: 228 MDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFR 287
Query: 190 -------ELAPERDVI-------------------------------LWNTIVSGYIDVR 211
E E V+ + N ++ Y
Sbjct: 288 EMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCG 347
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ AR +FD+M K+VI W +M+SGY N GD+ E + LF++ P R+V W +I GY
Sbjct: 348 CLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQ 407
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F + + F+ M + ++ P+ T+VT+L+ CA+LGAL+ KW+H Y + N +V
Sbjct: 408 FHHFDDAVALFREMQIQ-KIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVV 466
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG ALI+MY+KCG ++ ++++F ++ KD +W +II GLAM+G+ + AL LF EM+ G
Sbjct: 467 VGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVG 526
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD ITFIG+L AC+H GLVEEG +F SM + I P++EHYGC++DLL RAG L EA
Sbjct: 527 AKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEA 586
Query: 452 VDFVKRMPIEADAVI---WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
+ ++ +PIE ++ + LL +CR++ NV++ E ++L +E + + +L+NIY
Sbjct: 587 EELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIY 646
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ RW+D +++ M++ G KK+PGCS IEV+ +V
Sbjct: 647 ASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIV 682
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 189/387 (48%), Gaps = 45/387 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + +++ +V +G++ +Y+ +I +L + A+K+FD++T ++ VSWN M
Sbjct: 210 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 269
Query: 72 FNGYAQNEFHRTVVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN- 129
+GY + + F +M++ + P+ T L +C + L G+E+H V K
Sbjct: 270 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKEL 329
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF I AL+++Y+ + A +F EM +NV+ WTSMI+GYI+CGD+ AR LF
Sbjct: 330 GFTTRI--DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLF 387
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVE 245
+ +P RDV+LW +++GY+ + +A LF +M K D + T+L+G A G +E
Sbjct: 388 DKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALE 447
Query: 246 ECK-----------------------------------RLFEEMPERNVFSWNGLIGGYA 270
+ K +F E+ +++ SW +I G A
Sbjct: 448 QGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA 507
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGN 329
NG E L F M G P+D T + VLSAC+ G ++ ++ + + + +
Sbjct: 508 MNGKTSEALRLFSEMERVG-AKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 566
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSM 356
V +ID+ + G+++ A ++ +
Sbjct: 567 VEHYGCVIDLLGRAGLLDEAEELIQEI 593
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 193/428 (45%), Gaps = 48/428 (11%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L++C ++ L++ + + G R I A S G + A K+F + + ++
Sbjct: 104 LRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGN-LRYAEKIFNYVQDPSL 162
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQ 222
V+ M+ Y G + LF+ E D + ++ +R++ + K+
Sbjct: 163 FVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGF 222
Query: 223 MPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ K D +N+++ Y +VE K+LF+EM R+ SWN +I GY F +
Sbjct: 223 IVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDA 282
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNALI 337
++ F+ M EG P++AT+V+ LSAC L L+ +H Y G+ + NAL+
Sbjct: 283 INTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--DNALL 340
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG--RGA----------------- 378
DMYAKCG + A ++F+ M K++I W ++ISG G R A
Sbjct: 341 DMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTA 400
Query: 379 ------------GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
A++LF EM+ PD T + +L C +G +E+G + +
Sbjct: 401 MINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDEN 459
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I + ++++ ++ G + ++++ + + D W +++ C + N + +E A
Sbjct: 460 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSII--CGLAMNGKTSE-A 515
Query: 487 LERLTELE 494
L +E+E
Sbjct: 516 LRLFSEME 523
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 287/498 (57%), Gaps = 41/498 (8%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+++ A K+F+++ ++NVVSWN M +GYAQN + + LF +M +
Sbjct: 130 KISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPE--------------- 174
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
N+ ++ + + IE A ++F M ER+V+
Sbjct: 175 ------------------------RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVIS 210
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
WT+MI G G I AR LF+ PER+V+ WN +++GY + EA LF++MP++D+
Sbjct: 211 WTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDL 270
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
SWNTM++G NGD+ ++LF EMP++NV SW +I G G E L F RML+
Sbjct: 271 PSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLST 330
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
PN T V+VL AC+ L L + VH YQ + V +ALI+MY+KCG +
Sbjct: 331 NGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGT 390
Query: 349 AVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
A +F+ +DL++WN II+ A HG G A++ F EM+ +G PD +T++G+L AC
Sbjct: 391 ARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSAC 450
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+H GLVEEGL YF + D SI+ + +HY C+VDL RAGRL EA F++R+ + A +
Sbjct: 451 SHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARV 510
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W LL C V+ NV++ + A ++L E+EP+N +++LSNIY G+W++ AR+++ M+D
Sbjct: 511 WGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKD 570
Query: 527 TGFKKLPGCSSIEVNEVV 544
G KK PGCS IEV V
Sbjct: 571 KGLKKQPGCSWIEVGNRV 588
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 18/310 (5%)
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-LAPERDVIL 199
+ L G+ +EA ++F EM E +V+ WT++I+GYI CG I AR LF+ + +++V+
Sbjct: 59 ITNLSKDGRIMEAR-RLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVT 117
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
W +V GYI + +A KLF++MP K+V+SWNTM+ GYA NG ++ LFE+MPERNV
Sbjct: 118 WTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV 177
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SWN ++ A G E F RM + + +++ ++ G +D ++ +
Sbjct: 178 VSWNTVMSMLAQCGRIEEARRLFDRMPERDVI-----SWTAMIAGLSKNGRIDEARLLFD 232
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+ NV NA+I YA+ ++ A+D+F M +DL +WNT+I+GL +G
Sbjct: 233 RMP----ERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRR 288
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A LF+EM + I++ ++ C G EE L F M P + G V
Sbjct: 289 ARKLFNEMPKK----NVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKP---NQGTFV 341
Query: 440 DLLARAGRLA 449
+L LA
Sbjct: 342 SVLGACSNLA 351
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFN 73
+ +HQI ++ V + S ++ +I ++ ++ ARKMFD + +++VSWN +
Sbjct: 357 QQVHQIISKTV---YQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIA 413
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
YA + + + + F +M+K P+ T+ +L +C + EG + ++K+
Sbjct: 414 AYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKD---R 470
Query: 134 NIFVG----TALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDI----VS 184
+I V L++L ++ A+ ++ + + VW +++ G ++ +
Sbjct: 471 SILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQA 530
Query: 185 ARCLFELAPE 194
A+ L E+ PE
Sbjct: 531 AKKLLEVEPE 540
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 34/193 (17%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
GNV N +I +K G I A +F+ M D+ITW T+ISG G A LF +
Sbjct: 50 GNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV 109
Query: 388 ---KNA-----------------------GEMPDG--ITFIGILCACTHMGLVEEGLSYF 419
KN EMP+ +++ ++ G ++ + F
Sbjct: 110 DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLF 169
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ M + ++V + ++ +LA+ GR+ EA RMP E D + W ++
Sbjct: 170 EKMP-ERNVV----SWNTVMSMLAQCGRIEEARRLFDRMP-ERDVISWTAMIAGLSKNGR 223
Query: 480 VELAELALERLTE 492
++ A L +R+ E
Sbjct: 224 IDEARLLFDRMPE 236
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 298/536 (55%), Gaps = 40/536 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T A+ +++ AR +FD + +++VVSWNAM +GY ++ +F +M N
Sbjct: 101 MLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPH----KN 156
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ +L + V+ L E L ++ + L+ Y + A ++F
Sbjct: 157 SISWNGLLAAYVRSGRLEEARRL----FESKSDWELISCNCLMGGYVKRNMLGDARQLFD 212
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
++ R+++ W +MI+GY GD+ AR LFE +P RDV W +V Y+ + EAR++
Sbjct: 213 QIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRV 272
Query: 220 FDQMPKK-------------------------------DVISWNTMLSGYANNGDVEECK 248
FD+MP+K ++ SWN M+SGY NGD+ + +
Sbjct: 273 FDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQAR 332
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
LF+ MP+R+ SW +I GYA NGL+ E ++ M +G N +T LSACA +
Sbjct: 333 NLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESL-NRSTFCCALSACADI 391
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL+ K VH GY+ VGNAL+ MY KCG I+ A DVF + KD+++WNT++
Sbjct: 392 AALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTML 451
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+G A HG G AL++F M AG PD IT +G+L AC+H GL + G YF SM DY I
Sbjct: 452 AGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGI 511
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P +HY CM+DLL RAG L EA + ++ MP E DA W LLG+ R++ N+EL E A E
Sbjct: 512 TPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAE 571
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ ++EP N +V+LSN+Y GRW DV+++++ MR G +K PG S +EV +
Sbjct: 572 MVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKI 627
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 207/423 (48%), Gaps = 31/423 (7%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+FD + +N VS+NAM +GY +N LF +M D F++ ++L +
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKD----LFSWNLMLTGYARNRR 110
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
LR+ ++ + ++ A++ Y ++ A VF M +N + W ++
Sbjct: 111 LRDAR----MLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAA 166
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI-EARKLFDQMPKKDVISWNTM 234
Y+ G + AR LFE + ++I N ++ GY+ RNM+ +AR+LFDQ+P +D+ISWNTM
Sbjct: 167 YVRSGRLEEARRLFESKSDWELISCNCLMGGYVK-RNMLGDARQLFDQIPVRDLISWNTM 225
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+SGYA +GD+ + +RLFEE P R+VF+W ++ Y +G+ E F M + + N
Sbjct: 226 ISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYN 285
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+++ A+ +D + + + N+ N +I Y + G + A ++F+
Sbjct: 286 -----VMIAGYAQYKRMDMGRELFEEMPFP----NIGSWNIMISGYCQNGDLAQARNLFD 336
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M +D ++W II+G A +G A+++ EMK GE + TF L AC + +E
Sbjct: 337 MMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALEL 396
Query: 415 GLSYFQSMAMDYSIVPQIEHYGC-----MVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G + +V GC +V + + G + EA D + + D V W
Sbjct: 397 G------KQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQ-HKDIVSWNT 449
Query: 470 LLG 472
+L
Sbjct: 450 MLA 452
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 195/448 (43%), Gaps = 82/448 (18%)
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T I + + A VF M RN V + +MI+GY+ AR LF+ P +D+
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLF 96
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
WN +++GY R + +AR LFD MP+KDV+SWN MLSGY +G V+E + +F+ MP +N
Sbjct: 97 SWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN 156
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
SWNGL+ Y +G E R L E + +D +++
Sbjct: 157 SISWNGLLAAYVRSGRLEEA-----RRLFESK---SDWELISC----------------- 191
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
N L+ Y K ++ +A +F+ + +DLI+WNT+ISG A G +
Sbjct: 192 ---------------NCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLS 236
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA----MDYSIV----- 429
A LF E + D T+ ++ A G+++E F M M Y+++
Sbjct: 237 QARRLFEE----SPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYA 292
Query: 430 -----------------PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
P I + M+ + G LA+A + MP + D+V WA ++
Sbjct: 293 QYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMP-QRDSVSWAAIIA 351
Query: 473 SCRVYKNVELAELALERLTEL----EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
Y L E A+ L E+ E N + F + D+ + ++ + TG
Sbjct: 352 G---YAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTG 408
Query: 529 FKKLPGC--SSIEVNEVVMLGCLSRELD 554
++K GC + V GC+ D
Sbjct: 409 YEK--GCLVGNALVGMYCKCGCIDEAYD 434
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 13/206 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ QVV +G EK + ++ + + A +F + +++VSWN M GYA++
Sbjct: 399 QVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHG 458
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
F R + +F M P+ T VL +C G E H + G N
Sbjct: 459 FGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHY 518
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
+I+L +E A + M E + W S I+G + G+ +A +F++
Sbjct: 519 ACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGE-QAAEMVFKME 577
Query: 193 PERD---VILWNTIVSG--YIDVRNM 213
P V+L N + ++DV M
Sbjct: 578 PHNSGMYVLLSNLYAASGRWVDVSKM 603
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 304/533 (57%), Gaps = 36/533 (6%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFN 73
+ L QI + G++ Y T ++I CA + YAR++ + + +N +
Sbjct: 19 RALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 78
Query: 74 GYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY++ +E H +V V M+K P+ F+F V+K+ +LR G ++HC LK+G
Sbjct: 79 GYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLE 138
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++FVGT LI +Y CG + AR +F+
Sbjct: 139 SHLFVGTTLIGMYG-------------------------------GCGCVEFARKVFDEM 167
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ +++ WN +++ ++ AR++FD+M ++ SWN ML+GY G++E KR+F
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMP R+ SW+ +I G A+NG F E F+ + G + PN+ ++ VLSAC++ G+ +
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG-MSPNEVSLTGVLSACSQSGSFE 286
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD-LITWNTIISGL 371
F K +H + E GY V V NALIDMY++CG + A VF M K +++W ++I+GL
Sbjct: 287 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 346
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG+G A+ LF+EM G PDGI+FI +L AC+H GL+EEG YF M Y I P+
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGCMVDL R+G+L +A DF+ +MPI A++W LLG+C + N+ELAE +RL
Sbjct: 407 IEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLN 466
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P N + V+LSN Y G+WKDVA I+ +M KK S +EV + +
Sbjct: 467 ELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTM 519
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 304/533 (57%), Gaps = 36/533 (6%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFN 73
+ L QI + G++ Y T ++I CA + YAR++ + + +N +
Sbjct: 11 RALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 70
Query: 74 GYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY++ +E H +V V M+K P+ F+F V+K+ +LR G ++HC LK+G
Sbjct: 71 GYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLE 130
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++FVGT LI +Y CG + AR +F+
Sbjct: 131 SHLFVGTTLIGMYG-------------------------------GCGCVEFARKVFDEM 159
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ +++ WN +++ ++ AR++FD+M ++ SWN ML+GY G++E KR+F
Sbjct: 160 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 219
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMP R+ SW+ +I G A+NG F E F+ + G + PN+ ++ VLSAC++ G+ +
Sbjct: 220 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG-MSPNEVSLTGVLSACSQSGSFE 278
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD-LITWNTIISGL 371
F K +H + E GY V V NALIDMY++CG + A VF M K +++W ++I+GL
Sbjct: 279 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 338
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG+G A+ LF+EM G PDGI+FI +L AC+H GL+EEG YF M Y I P+
Sbjct: 339 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 398
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGCMVDL R+G+L +A DF+ +MPI A++W LLG+C + N+ELAE +RL
Sbjct: 399 IEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLN 458
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P N + V+LSN Y G+WKDVA I+ +M KK S +EV + +
Sbjct: 459 ELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTM 511
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/571 (35%), Positives = 314/571 (54%), Gaps = 46/571 (8%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITDQNVVSWNA 70
+ L+Q+ +V G+ D +T +I+ + L + YAR++FD+I D + +N+
Sbjct: 24 SVHRLNQLHAHLVVHGV---DDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNS 80
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ Y + + + L M + +PN FT P +LK+C ++ A H +V+K G
Sbjct: 81 LIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLG 140
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +FVG AL+ Y++ ++ + + F EM +RNVV W SMINGY G+ A LFE
Sbjct: 141 FVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFE 200
Query: 191 -------LAPER--------------------------------DVILWNTIVSGYIDVR 211
LA E D+IL N +V Y
Sbjct: 201 GMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCG 260
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+++ A FD MP K+ +SW +ML A ++ + FE++PE+++ SWN +I Y
Sbjct: 261 DLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQ 320
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
G F E LD + RM G + P++ T+ VLSAC +LG L K +H N + V
Sbjct: 321 GGRFHEALDLYNRMKLLG-LAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVA 379
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ N+L+DMYA+CG ++ A+ +F+ M +K++I+WN II LAMHGR AL F M
Sbjct: 380 LFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDA 439
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD ITF+ +L AC H GL+E G YFQ+M Y++ P +EHY CMVDLL R G+LA+A
Sbjct: 440 FPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKA 499
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
VD +K MP+ D V+W LLG+CR++ ++++ + +++L ELE + FV++SN+ +
Sbjct: 500 VDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYET 559
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+W+D+ R++ MR+ G KK G SSIE N
Sbjct: 560 HQWEDMKRLRKLMREWGMKKNMGVSSIETNS 590
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 185/411 (45%), Gaps = 50/411 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+++ +H+ VV G ++ ++ + A + +R+ FD++ D+NVVSWN+
Sbjct: 122 RVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M NGYAQ R LF M++ + + FT +L +C L G+ +H +L G
Sbjct: 182 MINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRG 241
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
R ++ + AL+++Y + A+ F M +N V WTSM+ I +AR FE
Sbjct: 242 CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFE 301
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-------------------------- 224
PE+ +I WN ++S Y+ EA L+++M
Sbjct: 302 QIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLAS 361
Query: 225 -------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
V +N++L YA G V+ LF EMP +NV SWN +IG A
Sbjct: 362 GKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAM 421
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGY 326
+G + L F+ M+ + P++ T V +LSAC G L+ F HVY G
Sbjct: 422 HGRAQDALMFFRSMVFDA-FPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGV 480
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGR 376
+ C ++D+ + G + AVD+ M + D++ W ++ +HG
Sbjct: 481 EHYAC----MVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGH 527
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 304/538 (56%), Gaps = 36/538 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSW 68
+ + K QI Q+ +GL + +++ CA + YA ++F + +
Sbjct: 11 KCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTFMH 70
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVL 127
N + + ++ + + F Q+++ + P+ FTF LK+ LR G +LH
Sbjct: 71 NTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAF 130
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
++GF A+IFVGT LI +Y+ CGD SAR
Sbjct: 131 RHGFDAHIFVGTTLISMYA-------------------------------ECGDSGSARR 159
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F+ E +V+ WN +++ ++ A+ +F MP +++ SWN ML+GYA G++
Sbjct: 160 VFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLA 219
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+R+F EMP R+ SW+ +I G+A+NG F E F+ +L E + N+ ++ VLSACA+
Sbjct: 220 RRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLRE-EIRTNEVSLTGVLSACAQ 278
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNT 366
GA +F K +H + E G+ V NALID Y+KCG + A VF +M + +++W +
Sbjct: 279 AGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTS 338
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II+GLAMHG G A+ LFHEM+ +G PDGITFI +L AC+H GLVEEG F M Y
Sbjct: 339 IIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLY 398
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P IEHYGCMVDL RA RL +A +F+ MP+ +A+IW LLG+C ++ N+E+AEL
Sbjct: 399 GIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELV 458
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RL E++P N + V+LSN+Y G+WKDV+ I+ M + KK PG S IE+++V+
Sbjct: 459 KARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVI 516
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 319/562 (56%), Gaps = 42/562 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +V G E+ ++ +I + ++ R++FDK++++NVVSW ++ GYA+
Sbjct: 160 QVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRG 219
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ V LF +M ++ PN T V+ +C K+ L+ GE++ + + N +
Sbjct: 220 CYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVN 279
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------------------- 180
AL+++Y AI+ A K+F E ++N+V++ ++++ Y+ G
Sbjct: 280 ALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRP 339
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE---------------------ARKL 219
D ++ E D + GY+ +RN +E A ++
Sbjct: 340 DRITMLSAVSACSELDDVSCGKWCHGYV-LRNGLEGWDNVCNAIINMYMKCGKQEMACRV 398
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD+M K +SWN++++G+ NGD+E ++F MP+ ++ SWN +IG +F E +
Sbjct: 399 FDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAI 458
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ F+ M +EG + + T+V V SAC LGALD +KW+H Y + ++ +G AL+DM
Sbjct: 459 ELFRVMQSEG-ITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDM 517
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
+A+CG ++A+ VFN M +D+ W I +AM G G GA+ LF EM G PDG+ F
Sbjct: 518 FARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVF 577
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ +L A +H GLVE+G F+SM Y I PQ HYGCMVDLL RAG L+EA+ + M
Sbjct: 578 VALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQ 637
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+E + VIW +LL +CRV+KNV++A A ER++EL+P+ V+LSNIY GRW DVA+
Sbjct: 638 MEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAK 697
Query: 520 IKVAMRDTGFKKLPGCSSIEVN 541
+++ +++ G K+PG SSIE+N
Sbjct: 698 VRLHLKEKGAHKMPGSSSIEIN 719
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 247/517 (47%), Gaps = 62/517 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMFDK-ITDQNV 65
++ +T L Q+ +Q+ +GL +I++C ++ + + YA+K + I D +
Sbjct: 41 KKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGI 100
Query: 66 VSWNAMFN----GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
+ + MF+ G++ +V+F Q+ + A+P+ FTFP VL +C K AL EG +
Sbjct: 101 MGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQ 160
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H ++K GF ++FV +LI Y I+ +VF +M ERNVV WTS+I GY G
Sbjct: 161 VHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGC 220
Query: 182 IVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNT 233
A LF E + + + G I ++ +L +Q+ + + + N
Sbjct: 221 YKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNA 280
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++ Y G +++ +++F+E ++N+ +N ++ Y GL EVL ML G P
Sbjct: 281 LVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR-P 339
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--NVCVGNALIDMYAKCGI------ 345
+ T+++ +SAC+ L + KW H Y NG +G NVC NA+I+MY KCG
Sbjct: 340 DRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC--NAIINMYMKCGKQEMACR 397
Query: 346 -------------------------IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+E+A +F++M DL++WNT+I L A
Sbjct: 398 VFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEA 457
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYG- 436
+ LF M++ G D +T +G+ AC ++G ++ Y + + + + H G
Sbjct: 458 IELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDM-----HLGT 512
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+VD+ AR G A+ +M ++ D W +G+
Sbjct: 513 ALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGA 548
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/551 (37%), Positives = 301/551 (54%), Gaps = 44/551 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T + +++ A K+FD + ++VVSWNAM +GYAQN F +F +M N
Sbjct: 114 MLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH----RN 169
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ +L + V L+E L ++ + L+ Y + A ++F
Sbjct: 170 SISWNGLLAAYVHNGRLKEARRL----FESQSNWELISWNCLMGGYVKRNMLGDARQLFD 225
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M R+V+ W +MI+GY GD+ A+ LF +P RDV W +VSGY+ + EARK
Sbjct: 226 RMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKY 285
Query: 220 FDQMPKKDVIS-------------------------------WNTMLSGYANNGDVEECK 248
FD+MP K+ IS WNTM++GY NG + + +
Sbjct: 286 FDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQAR 345
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+LF+ MP+R+ SW +I GYA NG + E L+ F M +G N +T LS CA +
Sbjct: 346 KLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGES-SNRSTFSCALSTCADI 404
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL+ K VH G++ VGNAL+ MY KCG + A DVF ++ KD+++WNT+I
Sbjct: 405 AALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMI 464
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+G A HG G AL LF MK AG PD IT +G+L AC+H GL++ G YF SM DY++
Sbjct: 465 AGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNV 524
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P +HY CM+DLL RAGRL EA + ++ MP + A W LLG+ R++ N EL E A E
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE 584
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML-- 546
+ ++EP+N +V+LSN+Y GRW DV +++ MR+ G +K+ G S +EV +
Sbjct: 585 MVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFS 644
Query: 547 --GCLSRELDR 555
C E DR
Sbjct: 645 VGDCFHPEKDR 655
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 193/366 (52%), Gaps = 23/366 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A ++F+ + ++ VS+NAM +GY +N LF +M + D F++ ++L V+
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERD----LFSWNVMLTGYVR 120
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
L E +L L+ K ++ A++ Y+ ++ A +VF +M RN + W +
Sbjct: 121 NRRLGEAHKLFDLMPKK----DVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGL 176
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI-EARKLFDQMPKKDVISW 231
+ Y+ G + AR LFE ++I WN ++ GY+ RNM+ +AR+LFD+MP +DVISW
Sbjct: 177 LAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVK-RNMLGDARQLFDRMPVRDVISW 235
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
NTM+SGYA GD+ + KRLF E P R+VF+W ++ GY NG M+ E R
Sbjct: 236 NTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNG-----------MVDEARK 284
Query: 292 FPNDATIVTVLSACARL-GALDFSKWVHVYAEYNGYQ-GNVCVGNALIDMYAKCGIIENA 349
+ ++ + +S A L G + + K V + N+ N +I Y + G I A
Sbjct: 285 YFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQA 344
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+F+ M +D ++W IISG A +G AL++F EMK GE + TF L C +
Sbjct: 345 RKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADI 404
Query: 410 GLVEEG 415
+E G
Sbjct: 405 AALELG 410
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 162/346 (46%), Gaps = 71/346 (20%)
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
++A +VF M R+ V + +MI+GY+ AR LF+ PERD+ WN +++GY+ R
Sbjct: 63 DSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNR 122
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ EA KLFD MPKKDV+SWN MLSGYA NG V+E + +F +MP RN SWNGL+ Y +
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVH 182
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG R+ R+F + S W +
Sbjct: 183 NG----------RLKEARRLFESQ------------------SNW------------ELI 202
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
N L+ Y K ++ +A +F+ M +D+I+WNT+ISG A G + A LF+E
Sbjct: 203 SWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE----S 258
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI----------------------- 428
+ D T+ ++ G+V+E YF M + I
Sbjct: 259 PIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFE 318
Query: 429 -VP--QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+P I + M+ + G +A+A MP + D V WA ++
Sbjct: 319 AMPCRNISSWNTMITGYGQNGGIAQARKLFDMMP-QRDCVSWAAII 363
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ QVV +G E ++ ++ + A +F+ I +++VVSWN M GYA++
Sbjct: 412 QVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHG 471
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
F R +VLF MKK P+ T VL +C + G E + + +
Sbjct: 472 FGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHY 531
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L +E A + M + W S I+G G+ +A +F++
Sbjct: 532 TCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE-KAAEMVFKME 590
Query: 193 PERD---VILWNTIVSG--YIDVRNM 213
P+ V+L N + ++DV M
Sbjct: 591 PQNSGMYVLLSNLYAASGRWVDVGKM 616
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/576 (34%), Positives = 328/576 (56%), Gaps = 47/576 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKIT-------- 61
+ ++ +++I ++VT+G K+ +T RI+ A A ++ + +AR +F +
Sbjct: 25 KNSEDVNKIHARLVTNGFIKNPNLTTRIVLAFAASRRPYXVEFARFVFHEYXIRSFSPGG 84
Query: 62 --DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
++ WNA+ ++ R ++LF M + + F+ +VLK+C ++ ++EG
Sbjct: 85 GDXEDXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEG 144
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
++H + K G +++F+ LI LY + A ++F M +R+ V + SMI+GY+ C
Sbjct: 145 MQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKC 204
Query: 180 GDIVSARCLFELAPE----------------------------------RDVILWNTIVS 205
G SAR LF+L PE +D+I WN+++
Sbjct: 205 GSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMID 264
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
GY+ + +A+ LFD MP++DV++W+TM+ GYA G V + K LF++MP R+V S+N +
Sbjct: 265 GYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSM 324
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GY N E L+ F M E + P++ T+V VLSA A+LG L + +H+Y
Sbjct: 325 IAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQ 384
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ +G ALIDMY+KCG I++A+ VF ++ K + WN +I GLA+HG G A +
Sbjct: 385 FFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLL 444
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+
Sbjct: 445 QIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRS 504
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G + A + ++ MPIE + VIW L +C +K E EL + L NP+++V+LS
Sbjct: 505 GSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYVLLS 564
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
N+Y G+WKDV RI+ M++ +K+PGCS IE++
Sbjct: 565 NLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELD 600
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/538 (37%), Positives = 303/538 (56%), Gaps = 48/538 (8%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A ++F + + + SWN+M +G+AQ++ + F +M + D + N ++F L +C
Sbjct: 100 AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAG 159
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ L G ++H LV K+ + ++++G+ALI++YS ++ A +VF M ERN+V W S+
Sbjct: 160 LMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSL 219
Query: 173 INGYISCGDIVSARCLF------ELAPER------------------------------- 195
I Y G A +F L P+
Sbjct: 220 ITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNK 279
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
D++L N +V Y + EAR++FD+M ++V+S +M+SGYA V+ + +F
Sbjct: 280 FRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFS 339
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+M +RNV SWN LI GY NG E L F R+L ++P T +LSACA L L
Sbjct: 340 KMTQRNVVSWNALIAGYTQNGENEEALRLF-RLLKRESIWPTHYTFGNLLSACANLADLL 398
Query: 313 FSKWVHVYAEYNGYQ------GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ H + G++ ++ VGN+LIDMY KCG IE+ VF M +D ++WN
Sbjct: 399 LGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNA 458
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II G A +G GA AL +F +M GE PD +T IG+LCAC+H GLVEEG YF SM ++
Sbjct: 459 IIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EH 517
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
++P +HY CMVDLL RAG L EA + ++ MP+ DAV+W +LL +C+V+ N+E+ + A
Sbjct: 518 GLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHA 577
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E+L E++P N +V+LSN+Y +LGRW DV R++ MR G K PGCS IEV V
Sbjct: 578 AEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRV 635
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 48/403 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V S Y+ +I ++ + A ++F + ++N+V+WN++ Y QN
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVG 138
+ +F +M P+ T V+ +C + AL+EG ++H V+K N FR ++ +G
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ + A +VF M RNVV TSM++GY + +AR +F +R+V+
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVV 347
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK-------------------------------- 226
WN +++GY EA +LF + ++
Sbjct: 348 SWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHV 407
Query: 227 -------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
D+ N+++ Y G +E+ R+FE+M ER+ SWN +I GYA NG
Sbjct: 408 LKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNG 467
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
E L F++ML G P+ T++ VL AC+ G ++ + E +G
Sbjct: 468 YGAEALQIFRKMLVCGEK-PDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY 526
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
++D+ + G + A ++ +M D + W ++++ +HG
Sbjct: 527 TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 147/265 (55%), Gaps = 1/265 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
++ + N ++ Y + +ARKLFD+MP+++ +WN+++S +G ++E RLF MP
Sbjct: 49 EIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP 108
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
E + SWN ++ G+A + F E L+ F +M E + N+ + + LSACA L L+
Sbjct: 109 EPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLL-NEYSFGSALSACAGLMDLNMGT 167
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
VH + Y +V +G+ALIDMY+KCG + A +VF+ M ++L+TWN++I+ +G
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
+ AL +F M ++G PD +T ++ AC + ++EGL + +
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPI 460
+VD+ A+ ++ EA RM I
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRMSI 312
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 193/453 (42%), Gaps = 90/453 (19%)
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
+PN F +L SC++ + R +H +L F IF+ LI++Y ++ A K
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
+F M +RN W S+I+ G + A LF PE D WN++VSG+ E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 217 RKLFDQMPKKDVI----SWNTMLSG----------------------------------- 237
+ F +M ++D + S+ + LS
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G V + +F M ERN+ +WN LI Y NG E L+ F RM+ G + P++ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG-LEPDEVT 250
Query: 298 IVTVLSACARLGALDFSKWVHV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
+ +V+SACA L AL +H + N ++ ++ +GNAL+DMYAKC + A VF+ M
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 357 D-------------------------------TKDLITWNTIISGLAMHGRGAGALSLFH 385
+++++WN +I+G +G AL LF
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 386 EMKNAGEMPDGITFIGILCAC-----------THMGLVEEGLSYFQSMAMDYSIVPQIEH 434
+K P TF +L AC H ++++G FQS A V
Sbjct: 371 LLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE-FQSGAESDIFVGN--- 426
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
++D+ + G + + ++M E D V W
Sbjct: 427 --SLIDMYMKCGSIEDGSRVFEKMK-ERDCVSW 456
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
K L PN + +L +C R + ++ VH + + + N LID+Y K
Sbjct: 3 KHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGK 62
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
C +++A +F+ M ++ TWN++IS L G A LF M PD ++ +
Sbjct: 63 CDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSM 118
Query: 403 LCACTHMGLVEEGLSYFQSM 422
+ EE L YF M
Sbjct: 119 VSGFAQHDRFEESLEYFVKM 138
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 330/574 (57%), Gaps = 48/574 (8%)
Query: 13 ETTK--HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+T+K H H I+TQ+ T SD I +++ + A +F++I +V WN
Sbjct: 31 DTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSST----NLHKAHLVFNQIECPTLVVWNH 86
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G +Q++ + ++T+M N T + K+C +++ + G ++H LK G
Sbjct: 87 MIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLG 146
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY-------------- 176
F + +FV ALI +Y+ + A K+F M +R++V W ++I GY
Sbjct: 147 FESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFD 206
Query: 177 ------------------ISC---GDIVSARCLFELAPER----DVILWNTIVSGYIDVR 211
++C GD A + + E DV L NT++ Y R
Sbjct: 207 AMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMY-GRR 265
Query: 212 NMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
++ E A+ +FD+M +++++SWN ++ G+A G++ ++LF+ MP+R+V SW +I GY+
Sbjct: 266 SLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYS 325
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
F + + F+ M+ +V P+ T+ +VLSACA LG LD VH Y +G Q ++
Sbjct: 326 QASQFSDAVKLFQEMMA-AKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADI 384
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
VGN+LIDMY KCG++E A++VF+ M KD ++W ++ISGLA++G AL LF +M
Sbjct: 385 YVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLRE 444
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P TF+GIL AC H GLV +GL YF+SM + +VP ++HYGC+VDLL+R+G + +
Sbjct: 445 GVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDK 504
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A +F+K+MPI D V+W LL +C+++ NV LAE+A +RL EL+P + N+V+LSN Y
Sbjct: 505 AYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAG 564
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ RW D +++ M D+ +K G SSIEV+ +V
Sbjct: 565 VDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMV 598
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 324/571 (56%), Gaps = 48/571 (8%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDK-----------ITDQ 63
++QI +++T+G K+ ++T +II + + +AR +F + ++
Sbjct: 31 INQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHAFEFDEKEEEEEK 90
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ WNA+ Y+ + + L + M + A + FT +VLK+C ++ ++EG ++H
Sbjct: 91 DPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIH 150
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
L+ K F +++F+ LI Y + A +VF M +R+ V + SMI+GY+ G I
Sbjct: 151 GLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRID 210
Query: 184 SARCLFEL----------------------------------APERDVILWNTIVSGYID 209
AR +F+ PERD+I WN+++ G +
Sbjct: 211 LARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVK 270
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
M +A+ LFD+MP +D++SW M+ GYA NG V+ + LF+EMPER+V ++N ++GGY
Sbjct: 271 CGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGY 330
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
NG E L F M ++G ++AT++ LSA A+LG +D +H + E G+ +
Sbjct: 331 VQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLD 390
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+G ALIDMY+KCG IENA+ VF ++ K + WN II GLA+HG G A EM+
Sbjct: 391 GRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMER 450
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
PD ITFIG+L AC H GLV+EG+ F+ M + + P+++HYGCMVD+L RAG +
Sbjct: 451 MRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIE 510
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA +FV+ MP E + VIW +LL +C+ +++ + + E L L+ +P+++V+ SN+Y
Sbjct: 511 EAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYA 570
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
LG+W DV +++ M+ KK+PGCS IE+
Sbjct: 571 GLGKWNDVRKVRAMMKQKNLKKIPGCSWIEL 601
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 206/487 (42%), Gaps = 109/487 (22%)
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST---GKAIEAAYKVFGEM 161
++LK C +++ + ++H +L GF N F+ T +I +ST IE A +F
Sbjct: 20 VLLKKCKRLSDI---NQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRH 76
Query: 162 DERNV-----------VVWTSMINGYISCGDIVSARCLFELAPER--------------- 195
+W ++I Y D A L L E
Sbjct: 77 HAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKA 136
Query: 196 ------------------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
D+ L N ++S Y+ ++ A ++FD+MPK+D +S+
Sbjct: 137 CSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSY 196
Query: 232 NTMLSGYANNGDVEECKRLFEEMP--ERNVFSWNGLIGGYAN--NGLFFEVLDAFKRMLT 287
N+M+ GY G ++ + +F+ +P ERN+ SWN LI GYA +G+ F +M
Sbjct: 197 NSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILV-AWQLFAKMPE 255
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA-LIDMYAKCGII 346
+ N +++ C + G ++ ++ + ++ V A +ID YAK G +
Sbjct: 256 RDLISWN-----SMIDGCVKCGRMEDAQGL-----FDRMPNRDIVSWANMIDGYAKNGRV 305
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCA 405
+ A +F+ M +D++ +N ++ G +G AL +F+ M++ G + D T + L A
Sbjct: 306 DIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSA 365
Query: 406 CTHMGLVEEGLSYFQ-----SMAMD----------YSIVPQIE---------------HY 435
+G +++G++ + ++D YS IE H+
Sbjct: 366 IAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHW 425
Query: 436 GCMVDLLARAGRLAEAVDFV---KRMPIEADAVIWANLLGSCRVYKNVELAELALE---R 489
++ LA G A DF+ +RM +E D + + LL +C V+ + E R
Sbjct: 426 NAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRR 485
Query: 490 LTELEPK 496
+ ++EPK
Sbjct: 486 VHKVEPK 492
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 309/534 (57%), Gaps = 14/534 (2%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--------MTYARKMFDKITDQNVVSWN 69
L QI ++ L + + +T CA L + +AR+ F+ ++ N
Sbjct: 33 LLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNATHTRDTFLCN 92
Query: 70 AMFNG-YAQNEFHRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEELHCLV 126
+M +A +F + LF +++ P+ +TF ++K C A EG LH +V
Sbjct: 93 SMIAAHFAARQFSQPFT-LFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTLLHGMV 151
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LKNG +++V TAL+++Y + +A KVF EM R+ V WT++I GY CGD+ AR
Sbjct: 152 LKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGDMSEAR 211
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
LF+ +RD++ +N ++ GY+ + + AR+LF++M +++V+SW +M+SGY NGDVE
Sbjct: 212 RLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVEN 271
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
K +F+ MPE+NVF+WN +IGGY N + L+ F+ M T V PN+ T+V VL A A
Sbjct: 272 AKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQT-ASVEPNEVTVVCVLPAVA 330
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LGALD +W+H +A + +G ALIDMYAKCG I A F M ++ +WN
Sbjct: 331 DLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNA 390
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+G A++G AL +F M G P+ +T IG+L AC H GLVEEG +F +M +
Sbjct: 391 LINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAME-RF 449
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I PQ+EHYGCMVDLL RAG L EA + ++ MP +A+ +I ++ L +C + +V AE
Sbjct: 450 GIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLRAERV 509
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L+ + +++ N+VML N+Y RW DV +K M+ G K CS IE+
Sbjct: 510 LKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEI 563
>gi|354805230|gb|AER41645.1| CRR4 [Oryza punctata]
Length = 632
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/520 (38%), Positives = 300/520 (57%), Gaps = 38/520 (7%)
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-- 145
+ M+ PN FTF +L++C + R +H +++ GF +++FV AL+++Y
Sbjct: 98 YVAMRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYYR 157
Query: 146 ---STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
+ AA +VF EM +++VV W S++ Y+S GD A LFE PER+V+ WNT
Sbjct: 158 CGGGGAGGVGAARQVFDEMVDKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNT 217
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE----------------- 245
+V+G+ +M+ AR +FD+MP ++ +SWN M+SGYA +GDVE
Sbjct: 218 VVAGFARTGDMVTARTVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSW 277
Query: 246 --------------ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
K LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR
Sbjct: 278 TAMVSAYAKIGDLDTAKELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRF 337
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P++AT+V+V+SACA+LG++++ W+ + + V +GNALIDM+AKCG + A
Sbjct: 338 RPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNTHLTVALGNALIDMFAKCGDVGRAQS 397
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F M+T+ +ITW T+ISG A +G AL +++ M G DG FI L ACTH GL
Sbjct: 398 IFYKMETRCIITWTTMISGFAFNGLCREALLVYNNMCREGVELDGTVFIAALAACTHGGL 457
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++EG S F M Y+I P++EHYGC+VDLL RAG L EA+ F++ MP+E VIW LL
Sbjct: 458 LQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLL 517
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
SC + N EL E +++TELEP N + V++SN GRW V + +MR+ G +K
Sbjct: 518 SSCVAHGNAELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEK 577
Query: 532 LPGCSSIEVNEVV--MLGCLSRELDRKSIVRAEANMIKLL 569
+PG S I+V V L +R RK I ++ L+
Sbjct: 578 VPGSSLIQVGSEVHEFLAKDTRHERRKEIYETVDGLMALM 617
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/579 (35%), Positives = 325/579 (56%), Gaps = 45/579 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ + HL QIQ Q++ +GL + + R+I CA + + + Y+ K+ I + N+ S
Sbjct: 61 EKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFS 120
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKK---LDAMPNCFTFPIVLKSCVKINALREGEELHC 124
WN G++++E + +L+ QM + ++ P+ FT+P++ K C + G +
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY-------- 176
VLK V A I ++++ +E A KVF E R++V W +INGY
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 177 ------------------------ISC---GDIVSARCLFELAPERDVILWNTIVSGYID 209
SC GD+ + +E E + + +V+ +D
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 210 V----RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
+ ++ EAR++FD + K+ ++SW TM+SGYA G ++ ++LF++M E++V WN +
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
IGG + L F+ M T P++ T++ LSAC++LGALD W+H Y E
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
NV +G +L+DMYAKCG I A+ VF+ + T++ +T+ II GLA+HG + A+S F+
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM +AG PD ITFIG+L AC H G+++ G YF M +++ PQ++HY MVDLL RA
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G L EA ++ MP+EADA +W LL CR++ NVEL E A ++L EL+P + +V+L
Sbjct: 540 GLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLD 599
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+YG+ W+D R + M + G +K+PGCSSIEVN +V
Sbjct: 600 GMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIV 638
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 316/581 (54%), Gaps = 47/581 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK------QMTYARKMFDKITDQ 63
+Q + +HL Q+ ++ G + P+++ + L + +AR+MFD++ D
Sbjct: 11 QQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDP 70
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ ++N++ Y+ + + + L + + +PN FT P VLK+C + A H
Sbjct: 71 DRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATH 130
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDI 182
+ +K G+ +FVG AL+ ++ ++ + ++F EM RNVV W +MI G G+
Sbjct: 131 GVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGET 190
Query: 183 VSARCLFELAPER---------------------------------------DVILWNTI 203
A LF + D+IL N +
Sbjct: 191 SEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNAL 250
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
V Y ++ A + FD MP K+V+SW +ML A +G V+ + FE+MPERN+ SWN
Sbjct: 251 VDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWN 310
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I Y G F E L + RM + G + P++ T+ VLS + G L + +H Y +
Sbjct: 311 AMISCYVQGGRFPETLGLYNRMKSLG-LTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQD 369
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ V V N+LIDMYA+CG ++ ++ +F M K+ I+WN II LAMHGR A+
Sbjct: 370 SFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMF 429
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F M + PD ITF+G+L AC+H GL+E+G YF++M Y++ P++EHY CMVDLL
Sbjct: 430 FRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLG 489
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
R G LA+AVD +K MP++ D V+W L+G+CR++ +VE+ +LA+++L ELE N FV+
Sbjct: 490 RHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVL 549
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+SN+ + +W+D+ R++ MRD G KK G SSIE+N +
Sbjct: 550 ISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSI 590
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/548 (36%), Positives = 307/548 (56%), Gaps = 47/548 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A + + A +F + +++ SWNAM +G+AQ + + M D + N
Sbjct: 91 VLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLN 150
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++F L +C + L G ++H L+ K+ + ++++G+AL+++YS + + +A + F
Sbjct: 151 EYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFD 210
Query: 160 EMDERNVVVWTSMINGY----------------ISCG----DI----------------- 182
+MD RN+V W S+I Y ++CG +I
Sbjct: 211 DMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIRE 270
Query: 183 ---VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
+ AR + D++L N +V Y R + EAR +FD+MP +DV+S +M+SGYA
Sbjct: 271 GLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYA 330
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
V+ + +F M ERNV SWN LI GY NG E + F +L ++P T
Sbjct: 331 KASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLF-LLLKRESIWPTHYTFG 389
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVF 353
+L+ACA L L + H + +G+ ++ VGN+LIDMY KCG++E+ VF
Sbjct: 390 NLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVF 449
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
M +D ++WN +I G A +G G AL +F EM +GE PD +T IG+L AC+H GLVE
Sbjct: 450 ERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVE 509
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EG YFQSM +++ +VP +HY CMVDLL RAG L EA + ++ MP+E DAV+W +LL +
Sbjct: 510 EGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAA 569
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
C+V+ N+ L + ERL E++P N +V+LSN+Y +LGRWKDV R++ MR G K P
Sbjct: 570 CKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQP 629
Query: 534 GCSSIEVN 541
GCS I +
Sbjct: 630 GCSWISIQ 637
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 192/406 (47%), Gaps = 53/406 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + S Y+ ++ ++ + + A++ FD + +N+VSWN++ Y QN
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVG 138
+ +F +M P+ T V +C ++A+REG ++H V+K + +R ++ +G
Sbjct: 232 PAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG 291
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ + + A VF M R+VV TSM++GY + +AR +F ER+V+
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVV 351
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK-------------------------------- 226
WN +++GY EA +LF + ++
Sbjct: 352 SWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 227 -------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
D+ N+++ Y G VE+ + +FE M ER+ SWN +I GYA NG
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNG 471
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
E L+ F+ ML G P+ T++ VLSAC+ G ++ + + G V V
Sbjct: 472 YGTEALEIFREMLVSGER-PDHVTMIGVLSACSHAGLVEEGRC--YFQSMTIEHGLVPVK 528
Query: 334 N---ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ ++D+ + G ++ A ++ +M + D + W ++++ +HG
Sbjct: 529 DHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG 574
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 177/406 (43%), Gaps = 76/406 (18%)
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
H V + + LD+ P F +L +CVK ++ E +H ++K F + IF+
Sbjct: 4 HGLVRKVVGDLSFLDSSP----FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNR 59
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L+++Y +E A KVF M +RN W +++ G + A LF+ PERD W
Sbjct: 60 LVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSW 119
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSGYANNGD------------- 243
N +VSG+ EA + M +D + S+ + LS A D
Sbjct: 120 NAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAK 179
Query: 244 ----------------------VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
V +R F++M RN+ SWN LI Y NG + L+
Sbjct: 180 SRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEV 239
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA-EYNGYQGNVCVGNALIDMY 340
F RM+ G + P++ T+ +V SACA L A+ +H +++ Y+ ++ +GNAL+DMY
Sbjct: 240 FVRMMNCG-IEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMY 298
Query: 341 AKCGIIENAVDVFNSMDTKD-------------------------------LITWNTIIS 369
AKC + A VF+ M +D +++WN +I+
Sbjct: 299 AKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIA 358
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
G +G A+ LF +K P TF +L AC ++ ++ G
Sbjct: 359 GYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLG 404
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
++ + N +V Y + +ARK+FD M +++ SWN +L G ++E LF+ MP
Sbjct: 53 EIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMP 112
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ER+ SWN ++ G+A F E L M +E V N+ + + LSACA L L
Sbjct: 113 ERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVL-NEYSFGSALSACAGLMDLSIGV 171
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
+H + Y +V +G+AL+DMY+KC ++ +A F+ MD +++++WN++I+ +G
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
AL +F M N G PD IT + AC + + EGL + +
Sbjct: 232 PAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG 291
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+VD+ A+ R+ EA RMP+ D V +++ +V+ A L + E
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMME 347
>gi|22293716|dbj|BAC10060.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 631
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/510 (39%), Positives = 297/510 (58%), Gaps = 38/510 (7%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-----STGKAIE 152
PN FTF +L++C + R +H +++ GF +++FV AL+++Y G +
Sbjct: 109 PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGGVG 168
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
AA +VF EM +R+VV W S++ Y+S GD A FE PER+V+ WNT+V+G+ + +
Sbjct: 169 AARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGD 228
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK------------------------ 248
M+ AR +FD+MP ++ +SWN M+SGYA +GDVE +
Sbjct: 229 MVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKI 288
Query: 249 -------RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR P++AT+V+V
Sbjct: 289 GDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSV 348
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+SACA+LG++++ W+ + + V +GNALIDM+AKCG + A +F M+T+ +
Sbjct: 349 VSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCI 408
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
ITW T+ISG A +G AL +++ M G D FI L AC H GL++EG S F
Sbjct: 409 ITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNE 468
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M Y+I P++EHYGCMVDLL RAG L EA+ F++ MP+E VIW LL SC + N E
Sbjct: 469 MVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLCSCVAHGNAE 528
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L E +++TELEP N + V++SN GRW V + +MR+ G +K+PG SSI+V
Sbjct: 529 LIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVG 588
Query: 542 EVV--MLGCLSRELDRKSIVRAEANMIKLL 569
V L +R RK I ++ L+
Sbjct: 589 SEVHEFLAKDTRHKRRKEIYETVDGLMALM 618
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 145/350 (41%), Gaps = 57/350 (16%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A++ M AR +FD++ +N VSWN M +GYA + +F +M + D
Sbjct: 219 VVAGFARMGDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKD---- 274
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ TA++ Y+ ++ ++F
Sbjct: 275 -----------------------------------VVSWTAMVSAYAKIGDLDTVNELFD 299
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELA-------PERDVILWNTIVSGYIDVRN 212
M +N+V W +MI GY A F+L P+ ++ ++VS + +
Sbjct: 300 HMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLV--SVVSACAQLGS 357
Query: 213 MIEARKLFDQMPKKD----VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ + + K + V N ++ +A GDV + +F +M R + +W +I G
Sbjct: 358 VEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISG 417
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGY 326
+A NGL + L + M EG V +D + L+ACA G L +S + + YN
Sbjct: 418 FAFNGLCRDALLVYNNMCREG-VQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYN-I 475
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
Q + ++D+ + G ++ A+ SM + ++ W T++ HG
Sbjct: 476 QPRMEHYGCMVDLLGRAGNLQEAILFIESMPLEPSVVIWVTLLCSCVAHG 525
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 139/292 (47%), Gaps = 17/292 (5%)
Query: 30 LEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+++ D ++ +++A A++ + ++FD + +N+VSWNAM GY N + + F
Sbjct: 270 MDQKDVVSWTAMVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTF 329
Query: 89 TQMKKLDAM--PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
Q+ L+ P+ T V+ +C ++ ++ + + K+ + +G ALI++++
Sbjct: 330 -QLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFA 388
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
+ A +F +M+ R ++ WT+MI+G+ G A ++ V L +T+
Sbjct: 389 KCGDVGRAESIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIA 448
Query: 207 YIDVRN----MIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-E 256
+ + E +F++M ++ I + M+ G+++E E MP E
Sbjct: 449 ALAACAHGGLLQEGWSIFNEMVERYNIQPRMEHYGCMVDLLGRAGNLQEAILFIESMPLE 508
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+V W L+ +G E+++ + +TE + P +++ ++S C+ L
Sbjct: 509 PSVVIWVTLLCSCVAHG-NAELIEYVSKKITE--LEPFNSSYQVLVSNCSAL 557
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN-- 348
V PN T +L ACA LG VH G+ +V V NAL+D+Y +CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGG 166
Query: 349 ---AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
A VF+ M +D+++WN+I+ G GA+ F M + +++ ++
Sbjct: 167 VGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPER----NVVSWNTVVAG 222
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
MG + + F M ++ + M+ A +G + A RM + D V
Sbjct: 223 FARMGDMVTARAVFDRMPSRNAV-----SWNLMISGYAMSGDVEAARSVFDRMD-QKDVV 276
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
W ++ + Y + + E + KN ++ + Y R+ + R
Sbjct: 277 SWTAMVSA---YAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALR 327
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 293/535 (54%), Gaps = 63/535 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q KHLHQ +++ GL++ + + R I AC+ L Y+ +F T ++ +N
Sbjct: 49 KQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYN 108
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ + E ++L+ ++ D + ++ P VLK+ V++ A+ G ++HC +
Sbjct: 109 TIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGT 168
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++I V TALI++ Y SCG +
Sbjct: 169 GLVSDIHVVTALIQM-------------------------------YSSCGCVS------ 191
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
EAR+LFD + +DV WN M++GYA GDV+ +
Sbjct: 192 -------------------------EARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARH 226
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LFE MPERNV SW +I GYA E + F+RM E V P++ ++ LSACA LG
Sbjct: 227 LFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLE-EVEPDEIAMLAALSACAHLG 285
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL+ +W+H Y + +G V + NALIDMYAKCG IE A++VF +M+ K +ITW ++I
Sbjct: 286 ALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMID 345
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA+HG G AL +F M+ P+ ITF+ IL AC H+GLVE G YF+ M Y I
Sbjct: 346 GLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIK 405
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+I+HYGCM+DLL RAG L EA + V+ MP EA+A IW +LL + R++ + EL + AL+
Sbjct: 406 PKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQH 465
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++EP N N+ +LSNIY +W + ++ MRDTG KK+PG S IEVN V
Sbjct: 466 LIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRV 520
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 290/505 (57%), Gaps = 8/505 (1%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
+ A L +AR + ++ WN +A R ++ F +M+ P+
Sbjct: 57 VPGAAPLADAVFAR--LPEPAARDPFPWNTAIRLHAPGR-PRAALLYFARMRSCGVRPDA 113
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
+TFP VLK+C R G +H ++ G A++F ALI Y + KVF E
Sbjct: 114 YTFPAVLKACGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDE 173
Query: 161 MD--ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV--RNMIEA 216
R++V W SM+ GY+ CG++ A+ LF+ P+RD W ++ GY + A
Sbjct: 174 AGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRA 233
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
R+LFDQM ++D++ WN+M+ GYA +G ++E + LFEEMPERNV SW+ +I G+ G
Sbjct: 234 RELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAK 293
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E L+ F+ ML G + P+ V +SACA+LGAL+ +W+H Y E +V V AL
Sbjct: 294 EALEHFQSMLRCG-IRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTAL 352
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
IDMY KCG ++ A+ +F SM + ++TWN +I GL HG G A+ LFH M+ D
Sbjct: 353 IDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDD 412
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
++ + +L ACTH GLV EGL F M D+ I P++EHYG +VDLL RAGRL +A ++
Sbjct: 413 LSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIE 472
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
MP+E +W +LL +CR + VELAEL++ERL L + +V+LSNIY D G W D
Sbjct: 473 TMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGD 532
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVN 541
V RI+ M D G +K G S IEV+
Sbjct: 533 VLRIRKLMSDEGMRKDIGRSVIEVD 557
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 159/399 (39%), Gaps = 85/399 (21%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVSWNAMFNGYAQN 78
+ + V GL + +I+ ++ RK+FD+ +++VSWN+M GY
Sbjct: 135 VHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSRDLVSWNSMVAGYVGC 194
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
LF +M + DA F
Sbjct: 195 GEMGLAQELFDEMPQRDA---------------------------------------FSW 215
Query: 139 TALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
ALI+ Y G ++ A ++F +M ER++V W SMI+GY G + AR LFE PER+
Sbjct: 216 GALIDGYGKQGGAGVDRARELFDQMTERDLVCWNSMIDGYARHGRMDEARSLFEEMPERN 275
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQM------PKK------------------------ 226
VI W+ ++ G++ EA + F M P +
Sbjct: 276 VISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHS 335
Query: 227 ---------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
DV+ ++ Y G ++ +FE MPER+V +WN +I G +G +
Sbjct: 336 YLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLD 395
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNAL 336
+ F RM E RV +D +++ +L+AC G + + H + G V AL
Sbjct: 396 AVMLFHRMEAE-RVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGAL 454
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAMH 374
+D+ + G ++ A +M + W ++++ H
Sbjct: 455 VDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSH 493
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 316/576 (54%), Gaps = 57/576 (9%)
Query: 12 LETTKHLH---QIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMF-------D 58
L +K LH QI ++++T+G + +T RII ++ + + +AR +F
Sbjct: 77 LPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRK 136
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE 118
N WNA+ ++ E +F M + + F+F +VLK+C ++ ++E
Sbjct: 137 HRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKE 196
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
G ++H L+ +++F+ L+ LY + A ++F M R+ V + SMI+GY+
Sbjct: 197 GMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVK 256
Query: 179 CGDIVSARCLFELAP----------------------------------ERDVILWNTIV 204
G + SAR LF++ P +RD+I WN+++
Sbjct: 257 HGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMI 316
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
G + M A LF+ MPK+DV+SW M+ GYA G+++ + LF+EMPER+V S N
Sbjct: 317 DGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNA 376
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
++ GY NG E L F ML+ +FP +AT++ LSA A+LG D +H Y E N
Sbjct: 377 MMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDN 436
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G+ + +G ALIDMYAKCG I+NA+ + WN IJ GLA+HG G A LF
Sbjct: 437 GFSLSEKLGXALIDMYAKCGSIDNAL----------IDHWNAIJXGLAIHGLGEVAFELF 486
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
EM+ PB ITFIG+L AC H GLV+EGL F M + + P+++HYGCMVD+L R
Sbjct: 487 MEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGR 546
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG + E FV++MPIE + V+W LL +CR ++N + E + L ++ NP+++V+L
Sbjct: 547 AGHVEEXKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLL 606
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
SNIY G W DV RI++ M+ KK+PGCS IE+
Sbjct: 607 SNIYAXFGMWNDVYRIRMMMKQRDLKKIPGCSQIEL 642
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 293/535 (54%), Gaps = 63/535 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q KHLHQ +++ GL++ + + R I AC+ L Y+ +F T ++ +N
Sbjct: 49 KQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYN 108
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ + E ++L+ ++ D + ++ P VLK+ V++ A+ G ++HC +
Sbjct: 109 TIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGT 168
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++I V TALI++ Y SCG +
Sbjct: 169 GLVSDIHVVTALIQM-------------------------------YSSCGCVS------ 191
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
EAR+LFD + +DV WN M++GYA GDV+ +
Sbjct: 192 -------------------------EARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARH 226
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LFE MPERNV SW +I GYA E + F+RM E V P++ ++ LSACA LG
Sbjct: 227 LFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLE-EVEPDEIAMLAALSACAHLG 285
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL+ +W+H Y + +G V + NALIDMYAKCG IE A++VF +M+ K +ITW ++I
Sbjct: 286 ALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMID 345
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA+HG G AL +F M+ P+ ITF+ IL AC H+GLVE G YF+ M Y I
Sbjct: 346 GLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIK 405
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+I+HYGCM+DLL RAG L EA + V+ MP EA+A IW +LL + R++ + EL + AL+
Sbjct: 406 PKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQH 465
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++EP N N+ +LSNIY +W + ++ MRDTG KK+PG S IEVN V
Sbjct: 466 LIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRV 520
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 303/523 (57%), Gaps = 5/523 (0%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFHRT 83
++ +E + I + + A + YARK+FD+ ++ N+M Y + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYND 60
Query: 84 VVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
+ ++K + P+ FTF + KSC + +G +LH + ++GF A+++V T ++
Sbjct: 61 SFAFYRDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVV 120
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWN 201
++Y+ + A VF EM +R+ V WT++I GY+ G++ A LF+ P+ +DV+++N
Sbjct: 121 DMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYN 180
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++ G++ +M AR+LFD+M K VI+W TM+ GY N+ D++ ++LF+ MPERN+ S
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVS 240
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +IGGY N E + F+ M + P+D TI++VL A + GAL +W H +
Sbjct: 241 WNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
+ V V A++DMY+KCG IE A +F+ M K + +WN +I G A++G AL
Sbjct: 301 QRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAAL 360
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M E PD IT + ++ AC H GLVEEG +FQ M + + +IEHYGCMVDL
Sbjct: 361 DLFLTMAKE-EKPDEITMLAVISACNHGGLVEEGRKWFQ-MMRKFGLNAKIEHYGCMVDL 418
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
L RAG L +A + MP + + +I ++ L +C YK++E AE L++ ELEP+N N+
Sbjct: 419 LGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
V+L N+Y RW D +K MR KK GCS IE+N +V
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIEINYIV 521
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 171/381 (44%), Gaps = 82/381 (21%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +Q+ SG Y++ ++ A+ +M AR +FD++ ++ VSW A+ GY +
Sbjct: 99 QLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFG 158
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF QM + +K V NA+ +G +K+G
Sbjct: 159 ELDLASKLFDQMPQ-------------VKDVVIYNAMMDG------FVKSG--------- 190
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+ +A ++F EM + V+ WT+MI+GY + DI SAR LF+ PER+++
Sbjct: 191 ----------DMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVS 240
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMP----------------------------------- 224
WNT++ GY + EA +LF +M
Sbjct: 241 WNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 225 -----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
K V +L Y+ G++E+ KR+F+EMPE+ V SWN +I GYA NG L
Sbjct: 301 QRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAAL 360
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALID 338
D F M E + P++ T++ V+SAC G ++ KW + ++ G + ++D
Sbjct: 361 DLFLTMAKEEK--PDEITMLAVISACNHGGLVEEGRKWFQMMRKF-GLNAKIEHYGCMVD 417
Query: 339 MYAKCGIIENAVDVFNSMDTK 359
+ + G ++ A + +M K
Sbjct: 418 LLGRAGNLKQAEHLITNMPFK 438
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/554 (36%), Positives = 296/554 (53%), Gaps = 73/554 (13%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
++D A T + L + V L +S Y+ +I+ C + +A ++F +
Sbjct: 9 LEDAAIARLRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHV 68
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC---------FTFPIVLKSCV 111
N+ NAM YAQN HR V ++ +M + P+ FT+P +LK+C
Sbjct: 69 PAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACG 128
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ A + G ++H V ++G E + +V S
Sbjct: 129 GLAASQLGRQVHAHVARSGC-------------------------------ESHAIVQNS 157
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
+I Y CGD+ A RK+FD M +KD +SW
Sbjct: 158 LIEMYTRCGDLSLA-------------------------------RKVFDGMREKDAVSW 186
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
NT++S +A G + + + LF MP++ V SW L+ GY G F ++ F++M EG
Sbjct: 187 NTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEG-F 245
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P+D +IV VL ACA+LGAL+ +W++ Y +G G + + NAL++MYAKCG IE A+
Sbjct: 246 EPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQ 305
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACTHMG 410
+F+ M KD+I+W+T I GLA HGR A+ LF M G MP+GITF+G+L AC+H G
Sbjct: 306 LFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAG 365
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
L++EGL YF M +Y + P +EHYGC+VDLL R+GR+ A+D + MPI D IW +L
Sbjct: 366 LLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSL 425
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
L +CR + +V+ A +A ERL ELEP++ N VML+N+Y GRW +VA + +R +
Sbjct: 426 LSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTR 485
Query: 531 KLPGCSSIEVNEVV 544
K PGCS IEV+ VV
Sbjct: 486 KTPGCSMIEVDNVV 499
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 319/562 (56%), Gaps = 42/562 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI +V G K ++ ++ A+ ++ ARK+FD+++++NVVSW +M GYA+ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 80 FHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
F + V LF +M + + PN T V+ +C K+ L GE+++ + +G N +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
+AL+++Y AI+ A ++F E N+ + +M + Y+ G A +F L + V
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 198 ------------------ILWNTIVSGYIDVRNMIE---------------------ARK 218
ILW GY+ +RN E A +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD+M K V++WN++++GY NG+V+ FE MPE+N+ SWN +I G LF E
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
++ F M ++ V + T++++ SAC LGALD +KW++ Y E NG Q +V +G L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
M+++CG E+A+ +FNS+ +D+ W I +AM G A+ LF +M G PDG+
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+G L AC+H GLV++G F SM + + P+ HYGCMVDLL RAG L EAV ++ M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P+E + VIW +LL +CRV NVE+A A E++ L P+ ++V+LSN+Y GRW D+A
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 519 RIKVAMRDTGFKKLPGCSSIEV 540
+++++M++ G +K PG SSI++
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQI 715
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 269/617 (43%), Gaps = 68/617 (11%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMFDKIT 61
T + + +T L + GL+ +++ +L + +++A+++F+
Sbjct: 35 TPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSE 94
Query: 62 DQNVV-SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+N++ GYA + ++LF +M P+ +TFP L +C K A G
Sbjct: 95 SYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
++H L++K G+ ++FV +L+ Y+ +++A KVF EM ERNVV WTSMI GY
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 181 DIVSARCLF-------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
A LF E+ P ++ ++S + ++ K++ + + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMV--CVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 234 MLSG----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
M+S Y ++ KRLF+E N+ N + Y GL E L F M+ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--NVCVGNALIDMYAKC---- 343
V P+ ++++ +S+C++L + + K H Y NG++ N+C NALIDMY KC
Sbjct: 333 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALIDMYMKCHRQD 389
Query: 344 ----------------------GIIEN-----AVDVFNSMDTKDLITWNTIISGLAMHGR 376
G +EN A + F +M K++++WNTIISGL
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 377 GAGALSLFHEMKNA-GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A+ +F M++ G DG+T + I AC H+G ++ + + + I +
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLG 508
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--L 493
+VD+ +R G A+ + D W +G+ + N E A + + E L
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
+P A FV G + I +M KL G S E V GC+ L
Sbjct: 568 KPDGVA-FVGALTACSHGGLVQQGKEIFYSML-----KLHGVSP----EDVHYGCMVDLL 617
Query: 554 DRKSIVRAEANMIKLLP 570
R ++ +I+ +P
Sbjct: 618 GRAGLLEEAVQLIEDMP 634
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 305/537 (56%), Gaps = 52/537 (9%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAM 71
+T + L Q+ + +G + +I CA + + YAR +F ++ + N WN +
Sbjct: 30 KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTI 89
Query: 72 FNGYAQ-NEFH--RTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
A+ N+ H ++LF+ M PN FTFP VLK+C + + LREG+++H L++
Sbjct: 90 LRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIV 149
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF + FV + L+ +Y +E AY +F +NVV + C
Sbjct: 150 KFGFHEDEFVISNLVRMYVMCAVMEDAYSLFC----KNVVDF--------------DGSC 191
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
EL + RK +V+ WN M+ G GD++
Sbjct: 192 QMEL-----------------------DKRK-----QDGNVVLWNIMIDGQVRLGDIKSA 223
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
K LF+EMP+R+V SWN +I GYA NG F E ++ F+ M + + PN T+V+VL A AR
Sbjct: 224 KNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSN-IDPNYVTLVSVLPAIAR 282
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+GAL+ KW+H+YA N + + +G+AL+DMY+KCG I+ A+ VF ++ ++ ITW+ I
Sbjct: 283 IGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAI 342
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I AMHGR A+ FH M AG P+ + +IGIL AC+H GLVEEG S+F M
Sbjct: 343 IGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVG 402
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P+IEHYGCMVDLL RAG L EA + ++ MPIE D VIW LLG+C+++KN+++ E
Sbjct: 403 LQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVA 462
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E L EL P + ++V LSN+Y LG W+ VAR+++ M+ +K PGCS IE++ ++
Sbjct: 463 ETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGII 519
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 302/524 (57%), Gaps = 7/524 (1%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQNEFHR 82
++ +E + I + + A + YARK+FD+ D + +S N+M Y + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 83 TVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
L+ ++K P+ FTF + KSC + +G +LH + + GF A+++V T +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILW 200
+++Y+ + A F EM R+ V WT++I+GYI CG++ A LF+ P +DV+++
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++ G++ +M AR+LFD+M K VI+W TM+ GY N D++ ++LF+ MPERN+
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN +IGGY N E + F+ M + P+D TI++VL A + GAL +W H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+ V V A++DMY+KCG IE A +F+ M K + +WN +I G A++G A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L LF M E PD IT + ++ AC H GLVEEG +F M + + +IEHYGCMVD
Sbjct: 360 LDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVD 417
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG L EA D + MP E + +I ++ L +C YK++E AE L++ ELEP+N N
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+L N+Y RW D +K MR KK GCS IE+N +V
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIV 521
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 170/378 (44%), Gaps = 82/378 (21%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +Q+ G Y++ ++ A+ +M AR FD++ ++ VSW A+ +GY +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIR-- 156
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
L K D MP+ +K V NA+ +G +K+G
Sbjct: 157 ----CGELDLASKLFDQMPH-------VKDVVIYNAMMDG------FVKSG--------- 190
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+ +A ++F EM + V+ WT+MI+GY + DI +AR LF+ PER+++
Sbjct: 191 ----------DMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMP----------------------------------- 224
WNT++ GY + E LF +M
Sbjct: 241 WNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 225 -----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
K V +L Y+ G++E+ KR+F+EMPE+ V SWN +I GYA NG L
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALID 338
D F M+ E + P++ T++ V++AC G ++ KW HV E G + ++D
Sbjct: 361 DLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 339 MYAKCGIIENAVDVFNSM 356
+ + G ++ A D+ +M
Sbjct: 418 LLGRAGSLKEAEDLITNM 435
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 302/524 (57%), Gaps = 7/524 (1%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQNEFHR 82
++ +E + I + + A + YARK+FD+ D + +S N+M Y + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 83 TVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
L+ ++K P+ FTF + KSC + +G +LH + + GF A+++V T +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILW 200
+++Y+ + A F EM R+ V WT++I+GYI CG++ A LF+ P +DV+++
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++ G++ +M AR+LFD+M K VI+W TM+ GY N D++ ++LF+ MPERN+
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN +IGGY N E + F+ M + P+D TI++VL A + GAL +W H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+ V V A++DMY+KCG IE A +F+ M K + +WN +I G A++G A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L LF M E PD IT + ++ AC H GLVEEG +F M + + +IEHYGCMVD
Sbjct: 360 LDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVD 417
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG L EA D + MP E + +I ++ L +C YK++E AE L++ ELEP+N N
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+L N+Y RW D +K MR KK GCS IE+N +V
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIV 521
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 171/378 (45%), Gaps = 82/378 (21%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +Q+ G Y++ ++ A+ +M AR FD++ ++ VSW A+ +GY +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIR-- 156
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
L K D MP+ +K V NA+ +G +K+G
Sbjct: 157 ----CGELDLASKLFDQMPH-------VKDVVIYNAMMDG------FVKSG--------- 190
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+ +A ++F EM + V+ WT+MI+GY + DI +AR LF+ PER+++
Sbjct: 191 ----------DMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMP----------------------------------- 224
WNT++ GY + E +LF +M
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 225 -----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
K V +L Y+ G++E+ KR+F+EMPE+ V SWN +I GYA NG L
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALID 338
D F M+ E + P++ T++ V++AC G ++ KW HV E G + ++D
Sbjct: 361 DLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 339 MYAKCGIIENAVDVFNSM 356
+ + G ++ A D+ +M
Sbjct: 418 LLGRAGSLKEAEDLITNM 435
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 319/562 (56%), Gaps = 42/562 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI +V G K ++ ++ A+ ++ ARK+FD+++++NVVSW +M GYA+ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 80 FHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
F + V LF +M + + PN T V+ +C K+ L GE+++ + +G N +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
+AL+++Y AI+ A ++F E N+ + +M + Y+ G A +F L + V
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 198 ------------------ILWNTIVSGYIDVRNMIE---------------------ARK 218
ILW GY+ +RN E A +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD+M K V++WN++++GY NG+V+ FE MPE+N+ SWN +I G LF E
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
++ F M ++ V + T++++ SAC LGALD +KW++ Y E NG Q +V +G L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
M+++CG E+A+ +FNS+ +D+ W I +AM G A+ LF +M G PDG+
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+G L AC+H GLV++G F SM + + P+ HYGCMVDLL RAG L EAV ++ M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P+E + VIW +LL +CRV NVE+A A E++ L P+ ++V+LSN+Y GRW D+A
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 519 RIKVAMRDTGFKKLPGCSSIEV 540
+++++M++ G +K PG SSI++
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQI 715
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 269/617 (43%), Gaps = 68/617 (11%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMFDKIT 61
T + + +T L + GL+ +++ +L + +++A+++F+
Sbjct: 35 TPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSE 94
Query: 62 DQNVV-SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+N++ GYA + ++LF +M P+ +TFP L +C K A G
Sbjct: 95 SYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
++H L++K G+ ++FV +L+ Y+ +++A KVF EM ERNVV WTSMI GY
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 181 DIVSARCLF-------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
A LF E+ P ++ ++S + ++ K++ + + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMV--CVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 234 MLSG----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
M+S Y ++ KRLF+E N+ N + Y GL E L F M+ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--NVCVGNALIDMYAKC---- 343
V P+ ++++ +S+C++L + + K H Y NG++ N+C NALIDMY KC
Sbjct: 333 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALIDMYMKCHRQD 389
Query: 344 ----------------------GIIEN-----AVDVFNSMDTKDLITWNTIISGLAMHGR 376
G +EN A + F +M K++++WNTIISGL
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 377 GAGALSLFHEMKNA-GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A+ +F M++ G DG+T + I AC H+G ++ + + + I +
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLG 508
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--L 493
+VD+ +R G A+ + D W +G+ + N E A + + E L
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
+P A FV G + I +M KL G S E V GC+ L
Sbjct: 568 KPDGVA-FVGALTACSHGGLVQQGKEIFYSML-----KLHGVSP----EDVHYGCMVDLL 617
Query: 554 DRKSIVRAEANMIKLLP 570
R ++ +I+ +P
Sbjct: 618 GRAGLLEEAVQLIEDMP 634
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/564 (36%), Positives = 301/564 (53%), Gaps = 39/564 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT---YARKMFDKITDQNVVSWNA 70
+ K Q+ ++ GL + I R I A T Y + + SW
Sbjct: 16 SVKQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKSPDSFSWAC 75
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
Q+ + L+ QM++ P F LK+C +I G +H V K G
Sbjct: 76 AIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFG 135
Query: 131 FRAN---IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
F I+V TAL++ Y +E A K+F EM ERNVV W SM+ GY+ GD+V A+
Sbjct: 136 FSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQR 195
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F+ P++DVI WN+++SGY +M +A LF QMP+++ SWN M+SGY GD++
Sbjct: 196 VFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSA 255
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNG-----------------LFF-------------- 276
+ F+ MP+RN SW +I GY+ G L F
Sbjct: 256 RSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPK 315
Query: 277 EVLDAFKRMLT-EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E L F ML + V P++ T+ +V+SAC++LG L F W+ Y G + + + A
Sbjct: 316 EALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATA 375
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+D+YAKCG I+ A ++F+ + KDL+ + +I G ++G+ A+ LF EM +A P+
Sbjct: 376 LLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPN 435
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITFIG+L A H GLVEEG F SM Y++VP ++HYG MVDL RAGRL EA++ +
Sbjct: 436 SITFIGLLTAYNHAGLVEEGYHCFTSMK-KYNLVPSVDHYGIMVDLFGRAGRLQEALELI 494
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
K MP++ A +W LL +CR++ NVE E+A + ELEP +LSNIY RW
Sbjct: 495 KSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWD 554
Query: 516 DVARIKVAMRDTGFKKLPGCSSIE 539
DV R++ ++ GF K+PGCS +E
Sbjct: 555 DVKRLRKVTKEKGFSKIPGCSWME 578
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/537 (37%), Positives = 304/537 (56%), Gaps = 52/537 (9%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAM 71
+T + L Q+ + +G + +I CA + + YAR +F ++ + N WN +
Sbjct: 30 KTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTI 89
Query: 72 FNGYAQ-NEFH--RTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
A+ N+ H ++LF+ M PN FTFP VLK+C + + LREG+++H L++
Sbjct: 90 LRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIV 149
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF + FV + L+ +Y +E AY +F +NVV + C
Sbjct: 150 KFGFHEDEFVISNLVRMYVMCAVMEDAYSLFC----KNVVDF--------------DGSC 191
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
EL + RK +V+ WN M+ G GD++
Sbjct: 192 QMEL-----------------------DKRK-----QDGNVVLWNIMIDGQVRLGDIKSA 223
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
K LF+EMP R+V SWN +I GYA NG F E ++ F+ M + + PN T+V+VL A AR
Sbjct: 224 KNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSN-IDPNYVTLVSVLPAIAR 282
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+GAL+ KW+H+YA N + + +G+AL+DMY+KCG I+ A+ VF ++ ++ ITW+ I
Sbjct: 283 IGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAI 342
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I AMHGR A+ FH M AG P+ + +IGIL AC+H GLVEEG S+F M
Sbjct: 343 IGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVG 402
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P+IEHYGCMVDLL RAG L EA + ++ MPIE D VIW LLG+C+++KN+++ E
Sbjct: 403 LQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVA 462
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E L EL P + ++V LSN+Y LG W+ VAR+++ M+ +K PGCS IE++ ++
Sbjct: 463 ETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGII 519
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 60/319 (18%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMF--------- 57
A + +L K +H + +V G + +++ ++ M A +F
Sbjct: 133 ARASRLREGKQIHGL---IVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDG 189
Query: 58 -------DKITDQNVVSWN-------------------------------AMFNGYAQNE 79
+ D NVV WN M +GYAQN
Sbjct: 190 SCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNG 249
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M+ + PN T VL + +I AL G+ +H KN + +G+
Sbjct: 250 HFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGS 309
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL+++YS +I+ A +VF + +RN + W+++I + G A F L + V
Sbjct: 310 ALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTP 369
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRL 250
+ + I+S + E R F M K + + M+ G +EE + L
Sbjct: 370 NDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEEL 429
Query: 251 FEEMP-ERNVFSWNGLIGG 268
MP E + W L+G
Sbjct: 430 IRNMPIEPDDVIWKALLGA 448
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/497 (38%), Positives = 299/497 (60%), Gaps = 9/497 (1%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++ AR++FD + D+NVVSW +M GY +N LF M N ++ ++L
Sbjct: 102 LSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPH----KNVVSWTVMLGG 157
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
++ + + +L ++ + ++ T +I Y ++ A +F EM +RNVV W
Sbjct: 158 LLQEGRVDDARKLFDMMPEK----DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTW 213
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
T+M++GY G + AR LFE+ PER+ + W ++ GY M EA LFD MP K V+
Sbjct: 214 TAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVV 273
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
N M+ G+ NG+V++ +R+F+ M ER+ +W+ +I Y G E L F+RM EG
Sbjct: 274 VCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREG 333
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
N ++++VLS C L +LD K VH + + ++ V + LI MY KCG + A
Sbjct: 334 LAL-NFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRA 392
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
VFN KD++ WN++I+G + HG G AL++FH+M ++G PD +TFIG+L AC++
Sbjct: 393 KQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYS 452
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G V+EGL F++M Y + P IEHY C+VDLL RA ++ EA+ V++MP+E DA++W
Sbjct: 453 GKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGA 512
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LLG+CR + ++LAE+A+E+L +LEPKN +V+LSN+Y GRW+DV ++ ++
Sbjct: 513 LLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSV 572
Query: 530 KKLPGCSSIEVNEVVML 546
KLPGCS IEV + V +
Sbjct: 573 TKLPGCSWIEVEKKVHM 589
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 166/375 (44%), Gaps = 37/375 (9%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A++ Y + A +F +M +RN V W +I+G+I G + AR +F+ P+R+V+
Sbjct: 60 AMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVS 119
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
W ++V GY+ ++ EA +LF MP K+V+SW ML G G V++ ++LF+ MPE++V
Sbjct: 120 WTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDV 179
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVH 318
+ +IGGY G E F M N T ++S AR G +D + K
Sbjct: 180 VAVTNMIGGYCEEGRLDEARALFDEMPKR-----NVVTWTAMVSGYARNGKVDVARKLFE 234
Query: 319 VYAEYN---------GYQGN-----------------VCVGNALIDMYAKCGIIENAVDV 352
V E N GY + V V N +I + G ++ A V
Sbjct: 235 VMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRV 294
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M +D TW+ +I G AL LF M+ G + + I +L C + +
Sbjct: 295 FKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASL 354
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ G + + + ++ + + G L A R P++ D V+W +++
Sbjct: 355 DHG-KQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVVMWNSMIT 412
Query: 473 SCRVYKNVELAELAL 487
Y L E AL
Sbjct: 413 G---YSQHGLGEEAL 424
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 164/359 (45%), Gaps = 61/359 (16%)
Query: 142 IELYSTGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
I Y+ ++ A KVF E + R V W +M+ Y A LFE P+R+ +
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVS 88
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
WN ++SG+I + EAR++FD MP ++V+SW +M+ GY NGDV E +RLF MP +NV
Sbjct: 89 WNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNV 148
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SW ++GG +L EGRV +DA + D V
Sbjct: 149 VSWTVMLGG----------------LLQEGRV--DDARKL-----------FDMMPEKDV 179
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
A N +I Y + G ++ A +F+ M ++++TW ++SG A +G+
Sbjct: 180 VAVTN-----------MIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDV 228
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC-- 437
A LF M E +++ +L TH G + E S F +M + +V C
Sbjct: 229 ARKLFEVMPERNE----VSWTAMLLGYTHSGRMREASSLFDAMPVKPVVV-------CNE 277
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY--KNVELAELALERLTELE 494
M+ G + +A K M E D W+ ++ +VY K EL L L R + E
Sbjct: 278 MIMGFGLNGEVDKARRVFKGMK-ERDNGTWSAMI---KVYERKGYELEALGLFRRMQRE 332
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 153/390 (39%), Gaps = 91/390 (23%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK +I + ++ AR +FD++ +NVV+W AM +GYA+N LF
Sbjct: 176 EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEV 235
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGK 149
M + N ++ +L +RE L + +K + V +I +
Sbjct: 236 MPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVK-----PVVVCNEMIMGFGLNG 286
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------------------- 190
++ A +VF M ER+ W++MI Y G + A LF
Sbjct: 287 EVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLS 346
Query: 191 ----LAP----------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS 230
LA ++D+ + + +++ Y+ N++ A+++F++ P KDV+
Sbjct: 347 VCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVM 406
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
WN+M++GY + +GL E L+ F M + G
Sbjct: 407 WNSMITGY-------------------------------SQHGLGEEALNVFHDMCSSG- 434
Query: 291 VFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
V P+D T + VLSAC+ G + F Y G + C L+D+ +
Sbjct: 435 VPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYAC----LVDLLGRADQ 490
Query: 346 IENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ A+ + M + D I W ++ H
Sbjct: 491 VNEAMKLVEKMPMEPDAIVWGALLGACRTH 520
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ Q+V S ++ Y+ +IT + + A+++F++ ++VV WN+M
Sbjct: 351 LASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSM 410
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNG 130
GY+Q+ + +F M P+ TF VL +C ++EG EL + K
Sbjct: 411 ITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQ 470
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI 173
I L++L + A K+ +M E + +VW +++
Sbjct: 471 VEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 305/571 (53%), Gaps = 40/571 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q + K L + Q++ GL +++++ QL+ + YA K+FD+I N +N
Sbjct: 44 DQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFN 103
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ GY+ + ++L+ +M +PN FT P VLK+C + G +H K
Sbjct: 104 HLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKL 163
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++ V A++ +Y I +A +VF ++ ER +V W SMINGY G A +F
Sbjct: 164 GMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMF 223
Query: 190 E------LAP---------------------------------ERDVILWNTIVSGYIDV 210
L P E D I+ N ++ Y
Sbjct: 224 REMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKC 283
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
N+ A+ +FDQM KDV+SW M++ YAN+G ++ F +MP +NV SWN +I +
Sbjct: 284 GNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHV 343
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
GL+ E +D F RM G V ND T+V +LS+C+ +G L K H Y N +
Sbjct: 344 QEGLYAEAVDLFYRMCDSG-VMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSA 402
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ NA+IDMYAKCG ++ A+DVF M K+ ++WN II LA+HG G A+ +F +M+ +
Sbjct: 403 TLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQAS 462
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD ITF G+L AC+H GLV+ G YF+ M + + I P +EHY CMVDLL R G L E
Sbjct: 463 GVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGE 522
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A+ +K+MP++ D V+W+ LLG+CR Y N+ + + +++L EL N +V+LSN+Y +
Sbjct: 523 AISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSE 582
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW D+ I + G KK S IE++
Sbjct: 583 SQRWDDMKNIWKILDQNGIKKCRAISFIEID 613
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/597 (34%), Positives = 306/597 (51%), Gaps = 78/597 (13%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV--------------- 65
+ V+ SG +I R+I A A+ + R++FDK+ +NV
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 66 ----------------VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+WN+M +G+AQ++ + F M K + N +TF L +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C +N + G ++H L+ K+ +++++G+AL+++YS + A +VF EM +RNVV W
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 170 TSMINGYISCGDIVSARCLFELAPE----------------------------------- 194
S+I Y G V A +F++ E
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 195 -----RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
D+IL N V Y + EAR +FD MP ++VI+ +M+SGYA + +
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M ERNV SWN LI GY NG E L F +L V P T +L ACA L
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYTFANILKACADLA 400
Query: 310 ALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
L HV+ +G+ + ++ VGN+LIDMY KCG +E VF M +D ++
Sbjct: 401 DLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN +I G A +G G AL LF EM ++GE PD IT IG+L AC H G VEEG YF SM
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
D+ + P +HY CMVDLL RAG L EA ++ MP++ D+VIW +LL +C+V++N+ L
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLG 580
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ E+L E+E N +V+LSN+Y +LG+W D ++ MR G K PGCS I++
Sbjct: 581 KYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKI 637
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 216/494 (43%), Gaps = 92/494 (18%)
Query: 103 FPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
F +L SC+K+ + + +H V+K+GF +F+ LI+ Y+ ++E ++F +M
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFD 221
+RNV W S++ G G + A LF PERD WN++VSG+ EA F
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 222 QMPKK---------------------------------------DVISWNTMLSGYANNG 242
M K+ DV + ++ Y+ G
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCG 201
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+V + +++F+EM +RNV SWN LI Y NG E L F+ ML E V P++ T+ +V+
Sbjct: 202 NVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML-ESWVEPDEVTLASVI 260
Query: 303 SACARLGALDFSKWVHV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
SACA L A+ + VH + + + ++ + NA +DMYAKC I+ A +F+SM +++
Sbjct: 261 SACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 362 I-------------------------------TWNTIISGLAMHGRGAGALSLFHEMKNA 390
I +WN +I+G +G ALSLF +K
Sbjct: 321 IAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 391 GEMPDGITFIGILCAC-----------THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
P TF IL AC H+ +++ G FQS D V ++
Sbjct: 381 SVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFK-FQSGEEDDIFVGN-----SLI 434
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIW-ANLLGSCRVYKNVELAELALERLTELEPKNP 498
D+ + G + E ++M +E D V W A ++G + E EL E L E +
Sbjct: 435 DMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDH 493
Query: 499 ANFVMLSNIYGDLG 512
+ + + G G
Sbjct: 494 ITMIGVLSACGHAG 507
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 53/405 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + + S YI ++ ++ + A+++FD++ D+NVVSWN++ Y QN
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNG 232
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVG 138
+ +F M + P+ T V+ +C ++A++ G+E+H V+K + R +I +
Sbjct: 233 PAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILS 292
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
A +++Y+ I+ A +F M RNV+ TSM++GY +AR +F ER+V+
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVV 352
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK-------------------------------- 226
WN +++GY EA LF + ++
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHV 412
Query: 227 -------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
D+ N+++ Y G VEE +F +M ER+ SWN +I G+A NG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
E L+ F+ ML G P+ T++ VLSAC G ++ + H ++ G +
Sbjct: 473 YGNEALELFREMLDSGEK-PDHITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVAPLR 529
Query: 334 N---ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ ++D+ + G +E A + M + D + W ++++ +H
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARL--GALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F ++ + F + +L +C +L A+D + VH +G+ V + N LID
Sbjct: 6 FLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDV-RCVHASVIKSGFSNEVFIQNRLIDA 64
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
YAKCG +E+ +F+ M +++ TWN++++GL G A SLF M D T+
Sbjct: 65 YAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTW 120
Query: 400 IGILCACTHMGLVEEGLSYFQSM 422
++ EE L YF M
Sbjct: 121 NSMVSGFAQHDRCEEALYYFAMM 143
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 302/540 (55%), Gaps = 48/540 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ Q +M A K F+++ ++NVVSWN M G+ N + LF ++ PN
Sbjct: 179 MLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPD----PN 234
Query: 100 CFTFPIVLKSCVKINALREGEELH----CLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
++ +L + + E +L C N+ A+I Y I+ A
Sbjct: 235 AVSWVTMLCGFARHGKIVEARKLFDRMPC--------KNVVSWNAMIAAYVQDLQIDEAV 286
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP---------------------- 193
K+F E ++ V WT+MINGY+ G + AR ++ P
Sbjct: 287 KLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDE 346
Query: 194 ---------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+RD I WN++++GY M EA LF QMP K+ +SWNTM+SGYA G++
Sbjct: 347 ASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEM 406
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ +FE M RNV SWN LI G+ NGL+ + L + M EG+ P+ +T LS+
Sbjct: 407 DRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKK-PDQSTFACSLSS 465
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA L AL K +H +GY ++ V NALI MYAKCG +++A VF ++ DLI+W
Sbjct: 466 CANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISW 525
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N++ISG A++G A F +M + G +PD +TFIG+L AC+H GL +G+ F+ M
Sbjct: 526 NSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIE 585
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
++I P EHY C+VDLL R GRL EA + V+ M ++A+A +W +LL +CRV+KN+EL +
Sbjct: 586 GFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGK 645
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+A RL ELEP N +N++ LSN++ + GRW+DV R++V MR+ KLPGCS IEV +
Sbjct: 646 IAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQI 705
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 208/401 (51%), Gaps = 20/401 (4%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
+V ++ + K+ ++T A+ +++ AR++FDK++ +N+VSWN M GY N
Sbjct: 38 RVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEE 97
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
LF M + D F++ +++ + L + EL LV + + A+I
Sbjct: 98 AHKLFDLMAERDN----FSWALMITCYTRKGMLEKARELFELVPD---KLDTACWNAMIA 150
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
Y+ + A KVF +M +++V + SM+ GY G + A FE ER+V+ WN +
Sbjct: 151 GYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLM 210
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
V+G+++ ++ A +LF+++P + +SW TML G+A +G + E ++LF+ MP +NV SWN
Sbjct: 211 VAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWN 270
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I Y + E + FK + + + T+++ R+G LD ++ V+ Y
Sbjct: 271 AMIAAYVQDLQIDEAVKLFKET-----PYKDCVSWTTMINGYVRVGKLDEAREVYNQMPY 325
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+V AL+ + G I+ A VF+ ++ +D I WN++I+G GR + AL+L
Sbjct: 326 K----DVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNL 381
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
F +M + + +++ ++ G ++ F++M +
Sbjct: 382 FRQM----PVKNAVSWNTMISGYAQAGEMDRATEIFEAMGV 418
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 202/449 (44%), Gaps = 65/449 (14%)
Query: 28 SGLEKSDYI---TPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
S LE+S + +II Q K + A+++F + +N ++N+M +A+N
Sbjct: 9 STLEQSKNVFNQNKKIIYLGKQGK-IDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDA 67
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
LF +M + N+ +I
Sbjct: 68 RQLFDKMSQ---------------------------------------RNLVSWNTMIAG 88
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER-DVILWNTI 203
Y +E A+K+F M ER+ W MI Y G + AR LFEL P++ D WN +
Sbjct: 89 YLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAM 148
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
++GY +A K+F++MP KD++S+N+ML+GY NG + + FE M ERNV SWN
Sbjct: 149 IAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWN 208
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
++ G+ NN + F+++ PN + VT+L AR G K V +
Sbjct: 209 LMVAGFVNNCDLGSAWELFEKIPD-----PNAVSWVTMLCGFARHG-----KIVEARKLF 258
Query: 324 NGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+ NV NA+I Y + I+ AV +F KD ++W T+I+G G+ A
Sbjct: 259 DRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEARE 318
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
++++M D ++ G ++E F + +I + M+
Sbjct: 319 VYNQM----PYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAIC-----WNSMIAGY 369
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++GR++EA++ ++MP++ +AV W ++
Sbjct: 370 CQSGRMSEALNLFRQMPVK-NAVSWNTMI 397
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
++ A+ L+ K LH++ ++ SG +++ +I A+ + A K+F I
Sbjct: 464 SSCANLAALQVGKQLHEL---ILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGV 520
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL- 122
+++SWN++ +GYA N + F QM +P+ TF +L +C +G +L
Sbjct: 521 DLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLF 580
Query: 123 HCLVLKNGFRANIFVG--TALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----IN 174
C++ GF + L++L +E A+ + M + N +W S+ ++
Sbjct: 581 KCMI--EGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVH 638
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
+ G I + R L EL P S YI + NM
Sbjct: 639 KNMELGKIAALR-LLELEPHN--------ASNYITLSNM 668
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 314/548 (57%), Gaps = 20/548 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q +TK L QI TQ++ + + K +++ R I LK A +F +I N ++N
Sbjct: 39 KQCTSTKSLQQIHTQMIINAIHKPNFLLHRFI----DLKDFNNASLLFSQIPYPNEYAFN 94
Query: 70 AMFNGYAQ--NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
M G +F+ T+ + QMK PN FT+P V +C + L G+ H VL
Sbjct: 95 IMIRGLTTTWQKFNLTIE-FYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVL 153
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+G A+ V +LI +YS + A +VF E+ E+++V W SMI+GY G A
Sbjct: 154 KSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVG 213
Query: 188 LF----ELAPERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGY 238
LF + E D + +I+ D+ ++ IE + ++M + + ++ Y
Sbjct: 214 LFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVG-SALIGMY 272
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
GD+ +R+F+ M +++V +WN +I GYA NG+ E + F M G V P+ T+
Sbjct: 273 GKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESG-VNPDKITL 331
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V VLSACA +GALDF KW+ YA G Q ++ V ALIDMYAKCG +++A+ VF M
Sbjct: 332 VGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQ 391
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM--PDGITFIGILCACTHMGLVEEGL 416
K+ ++WN +IS LA HGR +LSLF M G P+ I+FIG+L AC H GLV+EG
Sbjct: 392 KNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGR 451
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
F M+ + +VP+IEH+ CMVDLLARAG + EA DF+++MP + D V+ LLG+C+
Sbjct: 452 QLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQK 511
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+NV+++E + L E+EP N N+++ S I+ ++ RW D AR++V MR G K PGCS
Sbjct: 512 RRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCS 571
Query: 537 SIEVNEVV 544
IE+ V
Sbjct: 572 WIEIENQV 579
>gi|449446173|ref|XP_004140846.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 488
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/479 (41%), Positives = 278/479 (58%), Gaps = 13/479 (2%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M GYA N V L+ + + P+ FT+P VLKSC + +G+++HC +LK G
Sbjct: 1 MIRGYAFNGPAHQSVSLYGDLLQRGLKPHSFTYPFVLKSCADLGWFWDGKKVHCRILKTG 60
Query: 131 FRANIFVGTALIELYS-----TGKAIEA------AYKVFGEMDERNVVVWTSMINGYISC 179
F N V AL LY TG A A KVF EM R+V VW MI Y S
Sbjct: 61 FSLNSSVSDALFHLYVNFSKFTGPKDAADGMASDARKVFDEMCVRSVEVWNRMILRYTST 120
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
GD+ A+ LF +RD + WNT++SGYI V +++AR+LF++MP+K+V+SW +M+S YA
Sbjct: 121 GDVSGAQKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFEKMPEKNVVSWTSMISAYA 180
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
GD+ + F +MP+RNV SWN +I Y +G F E LD F +ML+EG + P+ T V
Sbjct: 181 KAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDLFNQMLSEG-ITPDGYTFV 239
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+V SAC+ LG L +H YA + Q V ALI+MYAKCG I A ++F + K
Sbjct: 240 SVFSACSHLGNLMLGTKIH-YAIDDFSQLGVIAATALIEMYAKCGDINRAFNLFIKIGKK 298
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ WN ++ LA+HG+ AL LF M+ G P+ TF+G L AC+H G+VEEG + F
Sbjct: 299 DVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDFTFLGALFACSHGGMVEEGQTIF 358
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M +Y I P+IEH+GC+VDLL+R GRL EA+D V +MP EAD IW LLG C++ +
Sbjct: 359 DMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGCKLRGD 418
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+ A +ER +L K V SN+Y + +W + + M + K G SS+
Sbjct: 419 FKRAGEIVERARKLRSKEGGIHVSFSNMYASVEQWAEAVNAREKMENENILKKTGQSSV 477
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 92/382 (24%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
ARK+FD++ ++V WN M Y LF M+ D + ++ ++ +K
Sbjct: 95 ARKVFDEMCVRSVEVWNRMILRYTSTGDVSGAQKLFNTMEDRDTV----SWNTMISGYIK 150
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ + + EL F +M E+NVV WTSM
Sbjct: 151 VGEVMKAREL-----------------------------------FEKMPEKNVVSWTSM 175
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM--------- 223
I+ Y GD+ +AR F P+R+V+ WN+++S Y+ + EA LF+QM
Sbjct: 176 ISAYAKAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDLFNQMLSEGITPDG 235
Query: 224 -----------------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+ VI+ ++ YA GD+ LF ++
Sbjct: 236 YTFVSVFSACSHLGNLMLGTKIHYAIDDFSQLGVIAATALIEMYAKCGDINRAFNLFIKI 295
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+++VF WN ++ A +G + L F M +G + PND T + L AC+ G ++
Sbjct: 296 GKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQG-LKPNDFTFLGALFACSHGGMVEEG 354
Query: 315 KWVH--VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGL 371
+ + + EY + + ++D+ ++ G +E A+DV + M + D+ W ++ G
Sbjct: 355 QTIFDMMEKEYK-IRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGC 413
Query: 372 AMHGRGAGALSLFHEMKNAGEM 393
+ G + K AGE+
Sbjct: 414 KLRG----------DFKRAGEI 425
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 11/246 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+A A+ + AR F+K+ +NVVSWN+M + Y Q+ + + LF QM P+
Sbjct: 175 MISAYAKAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDLFNQMLSEGITPD 234
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+TF V +C + L G ++H + + + + TALIE+Y+ I A+ +F
Sbjct: 235 GYTFVSVFSACSHLGNLMLGTKIH-YAIDDFSQLGVIAATALIEMYAKCGDINRAFNLFI 293
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI---DVRNMI-E 215
++ +++V W M+ G A LF L ++ + + G + M+ E
Sbjct: 294 KIGKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDFTFLGALFACSHGGMVEE 353
Query: 216 ARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGY 269
+ +FD M K+ I + ++ + NG +EE + ++MP E +V W L+GG
Sbjct: 354 GQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEADVAIWGALLGGC 413
Query: 270 ANNGLF 275
G F
Sbjct: 414 KLRGDF 419
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 319/561 (56%), Gaps = 43/561 (7%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI------TDQNVVSWNAMFNG 74
+ +T+G K+ +T RI+ + + ++ +AR +F + +++ WNA+
Sbjct: 8 RXITTGFIKNPNLTTRIVLSFSASRRSYLAEFARCIFHEYHVSSYSVEEDPFLWNAVIKS 67
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
++ R ++LF M + + F+ +VLK+C ++ + G ++H + K G ++
Sbjct: 68 FSHGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQVHGFLRKTGIYSD 127
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP- 193
+F+ LI LY + A +VF M +R+ V + SMI+GY+ CG I SAR LF+L P
Sbjct: 128 LFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPR 187
Query: 194 ---------------------------------ERDVILWNTIVSGYIDVRNMIEARKLF 220
E+D+I WN+++ GY+ R + +A+ LF
Sbjct: 188 EKKNLISWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLF 247
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D MP+KDV++W TM+ GYA G V + K+LF+EMP+R+V ++N ++ GY N E +
Sbjct: 248 DLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIG 307
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F M E + P++ T+V VLSA A+LG L + +H+Y N ++ +G ALID Y
Sbjct: 308 IFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTY 367
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KCG I+ ++ VF ++ K + WN +I GLA+HG G A + +++ PD ITFI
Sbjct: 368 SKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFI 427
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G + A + ++ MPI
Sbjct: 428 GVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPI 487
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
E + VIW L +C +K E EL + L NP++FV+LSN+Y G WK+V R+
Sbjct: 488 EPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRV 547
Query: 521 KVAMRDTGFKKLPGCSSIEVN 541
+ M++ +K+PGCS IE++
Sbjct: 548 RTTMKERKLRKIPGCSWIELD 568
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 326/574 (56%), Gaps = 45/574 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQM---TYARKMFDKI--------T 61
+T +++I +++T+G+ K+ +T RI+ A A ++ +AR +F++
Sbjct: 7 KTADDVNKIHARLITTGVIKNSNLTTRIVLAFASSRRQYLAEFARCVFEEHHVYSLPYGE 66
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
++ WNA+ ++ R + LF M + + F+ +VLK+C ++ ++ G
Sbjct: 67 TEDPFLWNAVIKSHSHGTDPRRSLFLFCLMLENGVSVDKFSLSLVLKACSRLGFVKAGMX 126
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H + K G +++F+ LI LY + + +VF M +R+ V + SMI+GY+ CG
Sbjct: 127 IHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGL 186
Query: 182 IVSARCLFELAP----------------------------------ERDVILWNTIVSGY 207
I SAR LF+L P E+D+I WN+++ GY
Sbjct: 187 IESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISWNSMIDGY 246
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + +A+ LFD MP++DVI+W TM+ GYA G + + K LF+++P R+V ++N ++
Sbjct: 247 VKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSMMA 306
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY N E L+ F +M E + P++ T+V VLSA A+LG L + +H Y +
Sbjct: 307 GYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHFYIVKKQFF 366
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+G ALIDMY+KCG I++A+ VF ++ K++ WN II GLA+HG G A + ++
Sbjct: 367 IGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGPAFDMLLQI 426
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ PD ITFIG+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 427 ERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGS 486
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ A +++MPIE + VIW L +C +K E+ EL + L NP+++V+LSN+
Sbjct: 487 IELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGYNPSSYVLLSNM 546
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 547 YASCGMWKDVRRVRTMMKERKIQKIPGCSWIELD 580
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 326/579 (56%), Gaps = 47/579 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMF------DKIT-- 61
ET ++Q+ +++ +G K+ +T +II + + +AR +F +I
Sbjct: 25 ETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRRN 84
Query: 62 --DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
D + WNA+ Y+ +VLF M + + F+F ++LK+C ++ + EG
Sbjct: 85 HLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEG 144
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++H L++K +N+F+ LI +Y IE A +VF M ++ V + SMI+GY+
Sbjct: 145 KQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKS 204
Query: 180 GDIVSARCLF----------------------------------ELAPERDVILWNTIVS 205
G I AR LF E PERD++ WNTI+
Sbjct: 205 GTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIG 264
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
G+ + A LF++MPK+DVISW+ M+ GYA GD++ + LF+EMP+++V ++N +
Sbjct: 265 GFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTI 324
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
+ GYA NG + E L+ F M + + P++ T+V LSA ++LG ++ + +H Y NG
Sbjct: 325 MAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENG 384
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
V ALIDMY+KCG IENA+ +F+ +D K + WN +ISG+A +G G A +
Sbjct: 385 ISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLL 444
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM PDGITFIG+L AC H GLV+EGL F+ M + + P+++HYGCMVD+L +A
Sbjct: 445 EMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKA 504
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G + A+ F++ MPIE + +IW LL +C+ ++N + EL + L ++ N +++V+LS
Sbjct: 505 GLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLS 564
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
NIY LG W +++++ M+ K+PGCS IE+ VV
Sbjct: 565 NIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVV 603
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + + +G+ + + +I ++ + A +FD + + + WNA
Sbjct: 366 QLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNA 425
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-- 128
M +G A+N + + +M +L P+ TF VL +C ++EG L C L
Sbjct: 426 MISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEG--LICFELMRK 483
Query: 129 -NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ + ++++ +E A K EM E N ++W ++++
Sbjct: 484 VHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSA 532
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/565 (35%), Positives = 319/565 (56%), Gaps = 41/565 (7%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPR-IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
HL Q+ Q++ S L++S + + +I++CA + YA +F+ I N
Sbjct: 38 HLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLREL 97
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+++E ++++ +M+ + F+FP +LK+ ++ +L EG E+H L K GF ++
Sbjct: 98 SRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDP 157
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----- 190
FV T L+ +Y+ I A +F +M R+VV W+ MI+GY G A LFE
Sbjct: 158 FVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNY 217
Query: 191 -LAPE-----------------------RDVILWNTIV----------SGYIDVRNMIEA 216
+ P+ D I+ N IV + Y +M A
Sbjct: 218 NVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLA 277
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
LF++M K++++ M++GY+ G +E + +F +M ++++ W+ +I GYA +
Sbjct: 278 LNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQ 337
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E L+ F M + G + P+ T+++V++ACA LGALD +KW+H++ + NG+ G + + NAL
Sbjct: 338 EALNLFNEMQSLG-IKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNAL 396
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
I+MYAKCG +E A +F+ M K++I+W +IS AMHG AL FH+M++ P+G
Sbjct: 397 IEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNG 456
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
ITF+G+L AC+H GLVEEG F SM +++I P+ HYGCMVDL RA L EA++ V+
Sbjct: 457 ITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVE 516
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
MP+ + +IW +L+ +CRV+ +EL E A +RL EL+P + V LSNIY RW+D
Sbjct: 517 AMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWED 576
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVN 541
V +++ M+ G K GCS E+N
Sbjct: 577 VGQVRKLMKHKGISKERGCSRFELN 601
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/513 (36%), Positives = 298/513 (58%), Gaps = 3/513 (0%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITA-CAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
K +QI TQ+ GL + + R I CA L +++ +++ I + + N +
Sbjct: 72 KQFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVSHCVSLYNHIEEPDAFMCNTIMRS 131
Query: 75 YAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
+ N+ + + +M +PN +TFP+V K C I +LREG+++H LV+K GF
Sbjct: 132 FVNVNDPFGALRFYYEKMIAKWVLPNHYTFPLVAKVCADIGSLREGQKVHALVVKFGFEL 191
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
++FV + I YS A VF ++V W SMI+GY+ G++ AR +F+
Sbjct: 192 DLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSWNSMIDGYVKNGELGLAREIFDEMY 251
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
ERD+ WN+++SGY+ V +M AR LFD+MP +DV+SWN M+ G+A DV + F+E
Sbjct: 252 ERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVSWNCMIDGFARIKDVSMAAKFFDE 311
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP RNV SWN ++ Y + + L F M+ G P++A++V+VL+ACA L LD
Sbjct: 312 MPLRNVVSWNVMLALYLRCKKYSDCLRFFD-MMVGGDFVPDEASLVSVLTACAELKMLDQ 370
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
KWVH Y + NG + ++ + AL+ MYAKCG ++ A +VF+ M K +++WN++I G +
Sbjct: 371 GKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLAREVFDKMPEKSVVSWNSMIIGYGI 430
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G AL +F EM+ G MP+ TF+ +L AC+H G+V G YF M Y I P+ E
Sbjct: 431 HGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWNGWWYFDLMHRKYRIQPKPE 490
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HYGC+VDLL +AG + D ++ E + +W +LL +CR + E E+ ++L +L
Sbjct: 491 HYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLLSACRAHCISEPGEILAKQLIKL 550
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
P + +++LSN Y GRW DV +++ +++
Sbjct: 551 FPNHVVPYLLLSNTYVAEGRWDDVENLRMTLKN 583
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 310/576 (53%), Gaps = 73/576 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVS 67
+Q +T K L Q+ ++ + IT ++ + A L + YA +F+ I +
Sbjct: 29 QQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSA 88
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N M G A ++LF +M + + FTF VLK+C ++ ALREGE++H L+L
Sbjct: 89 YNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALIL 148
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF++N FV LI++Y+ +CG I AR
Sbjct: 149 KSGFKSNEFVENTLIQMYA-------------------------------NCGQIGVARH 177
Query: 188 LFELAPERDVILWNTIVSGYID----------VRNMIEARKLFDQMP------------- 224
+F+ PER ++ WN+++SGY R ++E R FD +
Sbjct: 178 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 237
Query: 225 ----------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+++ +++ YA G V+ ++LF+EM +R+V +W+ +I G
Sbjct: 238 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 297
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
YA E L+ F M +G V+PN+ T+V+VL +CA LGA + KWVH Y + +
Sbjct: 298 YAQADRCKEALNLFHEM-QKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKL 356
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
V +G LID YAKCG I+ +V+VF M K++ TW +I GLA +G G AL F M
Sbjct: 357 TVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSML 416
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
P+ +TFIG+L AC+H LV++G F SM D+ I P+IEHYGCMVD+L RAG L
Sbjct: 417 ENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFL 476
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA F+ MP +AV+W LL SCR +KN+E+AE +LE +T LEP + ++++LSN Y
Sbjct: 477 EEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTY 536
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+GR +D R++ +++ KK+PGCS IE++ VV
Sbjct: 537 ALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVV 572
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/498 (39%), Positives = 299/498 (60%), Gaps = 11/498 (2%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++ ARK+FDK+ ++NVVSW +M GY Q +LF +M + N ++ ++L
Sbjct: 94 ISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPE----KNVVSWTVMLGG 149
Query: 110 CVKINALREGEELHCLV-LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
++ + E L ++ +K+ + +G L S G+ EA ++F EM +RNVV
Sbjct: 150 LIEDGRVDEARRLFDMIPVKDVVASTNMIGG----LCSEGRLSEAR-EIFDEMPQRNVVA 204
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
WTSMI+GY + AR LFE+ P+++ + W ++ GY + EA +LF MP K V
Sbjct: 205 WTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPV 264
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
+ N M+ G+ NG+V + + +F++M E++ +W+ LI Y G E L F M E
Sbjct: 265 AACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQRE 324
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G V PN +I+++LS C L +LD + VH + + ++ V + LI MY KCG +
Sbjct: 325 G-VRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVT 383
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
VF+ +KD++ WN+II+G A HG G AL +FHEM ++G PD ITFIG+L AC +
Sbjct: 384 GKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGY 443
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G V+EGL F+SM Y + + EHY CMVDLL RAG+L EA++ ++ MP+EADA++W
Sbjct: 444 TGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 503
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LL +CR +KN++LAE+A ++L +LEP + +++LSN+Y RWKDVA ++ MR
Sbjct: 504 ALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARN 563
Query: 529 FKKLPGCSSIEVNEVVML 546
K PGCS IEV+ V +
Sbjct: 564 VSKSPGCSWIEVDNKVHM 581
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 203/468 (43%), Gaps = 57/468 (12%)
Query: 28 SGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVL 87
S S IT I+ A+L Q+ AR +FD + + V SWNA+ GY N+ L
Sbjct: 10 SYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKL 69
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
F D MP ++ + N L G +KNG
Sbjct: 70 F------DKMPE--------RNTISWNGLVSG------YVKNGM---------------- 93
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY 207
I A KVF +M ERNVV WTSM+ GY+ G I A LF PE++V+ W ++ G
Sbjct: 94 ---ISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGL 150
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
I+ + EAR+LFD +P KDV++ M+ G + G + E + +F+EMP+RNV +W +I
Sbjct: 151 IEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMIS 210
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFP--NDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
GYA N +D +++ V P N+ T +L R G ++ + +
Sbjct: 211 GYAMN----NKVDVARKLF---EVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK- 262
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
V N +I + G + A VF+ M KD TW+ +I G AL+LF
Sbjct: 263 ---PVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFS 319
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M+ G P+ + I IL C + ++ G + + + I ++ + +
Sbjct: 320 LMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDL-DIYVSSVLITMYIKC 378
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
G L R D V+W +++ Y E ALE E+
Sbjct: 379 GDLVTGKRVFDRFS-SKDIVMWNSIIAG---YAQHGFGEKALEVFHEM 422
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ +Q+V S + Y++ +IT + + +++FD+ + +++V WN++
Sbjct: 343 LASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSI 402
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYAQ+ F + +F +M A P+ TF VL +C ++EG E+
Sbjct: 403 IAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIF-------- 454
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++++ Y+V ++ + M++ G + A L E
Sbjct: 455 -----------------ESMKSKYQV-----DQKTEHYACMVDLLGRAGKLNEAMNLIEN 492
Query: 192 AP-ERDVILWNTIVSGYIDVRNM----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
P E D I+W ++S +N+ I A+KL Q+ + + + YA+ ++
Sbjct: 493 MPVEADAIVWGALLSACRTHKNLDLAEIAAKKLL-QLEPSSAGPYILLSNLYASQSRWKD 551
Query: 247 CKRLFEEMPERNV 259
L + M RNV
Sbjct: 552 VAELRKTMRARNV 564
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/551 (37%), Positives = 304/551 (55%), Gaps = 47/551 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ACA+L + A +F I D + S+NA+ AQ+ + M D + N
Sbjct: 87 LLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLN 146
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++F L +C A R GE++H LV K+ +++++GTAL+++Y+ + E A KVF
Sbjct: 147 AYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFD 206
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-----------------------ELAPER- 195
M ERN+V W S+I Y G + A LF LA R
Sbjct: 207 AMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGRE 266
Query: 196 ----------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
D++L N +V Y EA+ +FD+M + V+S +M++GYA
Sbjct: 267 GRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYA 326
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
+ +V + + +F +M E+NV +WN LI YA+N E L F R+ E V+P T
Sbjct: 327 KSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRES-VWPTHYTYG 385
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVF 353
VL+ACA L L + HV+ G+ + +V VGN+L+DMY K G I + VF
Sbjct: 386 NVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVF 445
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
M +D ++WN +I G A +GR AL LF M + E PD +T IG+L AC H GLV+
Sbjct: 446 ERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVK 505
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EG YFQSM D+ I+P +HY CM+DLL RAG L E + ++ MP+E DAV+WA+LLG+
Sbjct: 506 EGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGA 565
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
CR++KN+++ E A +L EL+P N +V+LSN+Y +LG+W DV R++ +M+ G K P
Sbjct: 566 CRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQP 625
Query: 534 GCSSIEVNEVV 544
GCS IE+ V
Sbjct: 626 GCSWIEIGRKV 636
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 49/403 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V S YI ++ A+ ++ A+K+FD + ++N+VSWN++ Y QN
Sbjct: 168 QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNG 227
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG-FRANIFVG 138
+ LF +M K +P+ T V+ +C + A REG ++H ++K+ FR ++ +
Sbjct: 228 PVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLN 287
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ A VF M R+VV TSMI GY ++ A+ +F E++V+
Sbjct: 288 NALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVV 347
Query: 199 LWNTIVSGYIDVRNMIEARKL--------------------------------------- 219
WN +++ Y EA +L
Sbjct: 348 AWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHV 407
Query: 220 ------FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
FD P+ DV N+++ Y G + + ++FE M R+ SWN +I GYA NG
Sbjct: 408 LKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNG 467
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVHVYAEYNGYQGNVCV 332
+ L F+RML P+ T++ VLSAC G + + ++ E +G
Sbjct: 468 RAKDALLLFERMLCSNER-PDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDH 526
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ID+ + G ++ ++ +M + D + W +++ +H
Sbjct: 527 YTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLH 569
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 133/267 (49%), Gaps = 1/267 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
+ L NT++S Y + ++ +AR++FD MP ++ S+N +LS A G ++ LF +P
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+ + S+N ++ A +G + L M + V N + + LSACA A +
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVL-NAYSFASALSACASEKASRTGE 167
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
VH + + +V +G AL+DMYAKC E A VF++M +++++WN++I+ +G
Sbjct: 168 QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNG 227
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
AL+LF M G +PD +T ++ AC + EG M +
Sbjct: 228 PVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLN 287
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEA 462
+VD+ A+ GR EA RM I +
Sbjct: 288 NALVDMYAKCGRTWEAKCVFDRMAIRS 314
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 167/413 (40%), Gaps = 78/413 (18%)
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F F+ L+ Y+ ++ A +VF M RN + ++++ G A LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSG--------- 237
P+ D +N +V+ +A + M D + S+ + LS
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 238 --------------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
YA EE +++F+ MPERN+ SWN LI Y
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV-YAEYNGYQGNV 330
NG E L F RM+ +G V P++ T+ +V+SACA L A + VH + + ++ ++
Sbjct: 226 NGPVDEALALFVRMMKDGFV-PDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDM 284
Query: 331 CVGNALIDMYAKCGI-------------------------------IENAVDVFNSMDTK 359
+ NAL+DMYAKCG + +A VF M K
Sbjct: 285 VLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEK 344
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG---LVEEGL 416
+++ WN +I+ A + AL LF +K P T+ +L AC ++ L ++
Sbjct: 345 NVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAH 404
Query: 417 SYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ + P+ + + +VD+ + G +++ +RM D V W
Sbjct: 405 VHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAAR-DNVSW 456
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 17/210 (8%)
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ G + N L+ YA+ G + +A VF+ M ++ ++N ++S A GR AL+LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD------YSIVPQIEHYGCMV 439
+ + PD ++ ++ A G + L + +M D YS + C
Sbjct: 106 AIPD----PDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALS--ACAS 159
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
+ +R G A+ V + +D I L+ +Y E E A + + +N
Sbjct: 160 EKASRTGEQVHAL--VTKSSHGSDVYIGTALVD---MYAKCERPEEAQKVFDAMPERNIV 214
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
++ L Y G + + V M GF
Sbjct: 215 SWNSLITCYEQNGPVDEALALFVRMMKDGF 244
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 299/534 (55%), Gaps = 70/534 (13%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L I V+ L +S ++ +++ C + + + YA +F ++ + N +NAM +
Sbjct: 30 LKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTH 89
Query: 78 NEFHRTVVVLFTQMKKLD-------AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
N+ + ++ + +M +L P+ FTFP V+KSC
Sbjct: 90 NKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSC-------------------- 129
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ L+ Y+ GK + A FG
Sbjct: 130 --------SGLV-CYNLGKQVHAHLCKFG------------------------------- 149
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P+ ++ + N ++ Y ++++A K+FD M ++D ISWN+++SG+ G + + L
Sbjct: 150 --PKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGAL 207
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ MP R + SW +I GY G + + L F++M G V P++ +I++VL ACA+LGA
Sbjct: 208 FDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVG-VEPDEISIISVLPACAQLGA 266
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ KW+H+Y + NG + NAL++MY+KCG I A +F+ M D+I+W+T+I G
Sbjct: 267 LEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGG 326
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LA HG+ A+ LF MK A P+GITF+G+L AC H G EGL+YF SM+ DY I P
Sbjct: 327 LANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEP 386
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHYGC+VD+L RAGRL++A+D +++MP++ D+ IW +LL SCR + N+++A +A+E L
Sbjct: 387 EVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHL 446
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP + N+V+LSNIY DL +W V+R++ ++ KK PG S I++N VV
Sbjct: 447 EELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVV 500
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 312/537 (58%), Gaps = 35/537 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSW 68
+ ++ + + QIQ + + L ++ +++ CA + YAR++F I + +V +
Sbjct: 14 KCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMY 73
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLD-AMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N + G + ++ + LF +M++ A+P+ F+F +LK+ AL G +LHCL +
Sbjct: 74 NTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAV 133
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G +++FVGT LI +Y+ C +V AR
Sbjct: 134 GYGLDSHLFVGTTLISMYA-------------------------------ECACLVFARK 162
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F+ E +++ WN IV+ + +A ++F MP +++ SWN ML+GY G+++
Sbjct: 163 VFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLA 222
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F +MP ++ SW+ +I G+A+NG F + F+ + EG + PN+ ++ VLSACA+
Sbjct: 223 REVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREG-MRPNEVSLTGVLSACAQ 281
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
GA +F + +H + E +G+ + V NALID Y+KCG ++ A VF++M + ++W +
Sbjct: 282 AGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAM 341
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G+AMHG G A+ LF+EM+ + PD ITFI IL AC+H GLV+ G SYF M Y
Sbjct: 342 IAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYG 401
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P IEHYGCMVDL RAG+L +A DFV +MPI + ++W LLG+C ++ N+ LA
Sbjct: 402 IEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVK 461
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L+EL+P+N + V+LSNIY G+WKDVA ++ +M KK PG S IEVN ++
Sbjct: 462 RQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRII 518
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 308/564 (54%), Gaps = 47/564 (8%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ + L Q+ + V G +S ++ +++ A A L + AR + S A
Sbjct: 26 SARQLEQLHARAVLLGHARSSFVAAKLVRAFADLGHLRAARAVAAVRAHSQSGSSAAA-- 83
Query: 74 GYAQNEFHRTVVVLFTQMKK--LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
R V L+ QM + P FT VLK+ + LREGE++H V KNGF
Sbjct: 84 --------RDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGF 135
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ + + T L++LY+ ++ A +VF + ++ ++ +MI Y+ G++ A LFE+
Sbjct: 136 QTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEV 195
Query: 192 APERD--------------------------------VILWNTIVSGYIDVRNMIEARKL 219
PER+ ++L ++SG+ ++ +AR +
Sbjct: 196 MPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMISGFAKTGSVDDARSV 255
Query: 220 FDQMPKKDVISWNTMLS-GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
FD M ++DV +WN M+ YA G VE+ +++F+ MPERNV W +I GY G F +
Sbjct: 256 FDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQA 315
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+ F+ M G V +DATI TV+S+C ++GALD ++VH Y + +G + V N+LID
Sbjct: 316 VKLFRDMQISG-VKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLID 374
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGI 397
MY+KCG I+ A ++F + +D +W +I G A++G AL LF +M+ GE MP+ I
Sbjct: 375 MYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEI 434
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
TF+G+L +C+H GLVE+G +F M+ Y I P+IEHYGCMVDLL RA LAEA F++
Sbjct: 435 TFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEE 494
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MPI D IW +LL +CR V LAE ER+ ELEP V+LSN+Y RW DV
Sbjct: 495 MPIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDV 554
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVN 541
+++ M + K PGCS IEVN
Sbjct: 555 NKVRTGMGRSRVSKRPGCSVIEVN 578
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 177/418 (42%), Gaps = 59/418 (14%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
E + Q+ V +G + + I ++ A+ ++ AR++FD++ ++ +N M
Sbjct: 118 EMLREGEQVHVHVFKNGFQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMI 177
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y + LF M + N T ++ + + H + NG
Sbjct: 178 AAYMEAGEVELAEELFEVMPE----RNTHTLMEMVGGYSARGDMDSAK--HVFEMANGV- 230
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN-GYISCGDIVSARCLFEL 191
N+ + TA+I ++ +++ A VF M +R+V W MI Y CG + AR +F+
Sbjct: 231 VNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDA 290
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------------------------- 224
PER+V+ W +++SGY V +A KLF M
Sbjct: 291 MPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLG 350
Query: 225 ------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
K + N+++ Y+ GD+++ +F + +R+ FSW +I G+A N
Sbjct: 351 RYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVN 410
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQ 327
GL E LD F +M EG V PN+ T + VL++C+ G ++ F + VY +
Sbjct: 411 GLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIE 470
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLF 384
C ++D+ + ++ A M D+ W +++ A RG L+ +
Sbjct: 471 HYGC----MVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLL--FACRARGEVGLAEY 522
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/546 (37%), Positives = 316/546 (57%), Gaps = 16/546 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q ++ L QI Q++ + + K +++ +II LK + YA +F+++T N+ ++N
Sbjct: 41 KQCKSKNLLKQIHAQMLINSIPKPNFLLSKII----DLKDLAYASLVFNQLTKPNIYAFN 96
Query: 70 AMFNGYAQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
M G A + + V L+ ++K L N FT+P + +C + L G+ HCLV K
Sbjct: 97 VMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFK 156
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G + +V +LI +Y+ + A KVF EM +R++V W SMI+GY G A L
Sbjct: 157 AGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGL 216
Query: 189 F----ELAPERDVILWNTIVSGYIDVRNMIEARKL--FDQMPKKDVISW--NTMLSGYAN 240
F E E D + +++ D+ ++ R + F K +V S+ + ++ Y
Sbjct: 217 FMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGK 276
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
GD+ +R+F+ MP ++V +WN +I GYA NG E + F M G P+ T++
Sbjct: 277 CGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGP-HPDRVTMIE 335
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
VLSAC+ +GALD KWV +A G Q +V V +ALIDMYAKCG +++AV VF SM K+
Sbjct: 336 VLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKN 395
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMK--NAGEMPDGITFIGILCACTHMGLVEEGLSY 418
++WN +IS LA HG+ ALSLF M N P+ ITFIG+L AC H GLV+EG
Sbjct: 396 EVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQL 455
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+SM + + +VP++EHY CMVDL ARAG L EA D +K+MP + D ++ +LLG+C+ +
Sbjct: 456 FESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRR 515
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
N ++ E ++ E+E N N+V+ S IY ++ RW D A+++V MR G K PGCS I
Sbjct: 516 NADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWI 575
Query: 539 EVNEVV 544
++ V
Sbjct: 576 DIGAHV 581
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/529 (37%), Positives = 312/529 (58%), Gaps = 36/529 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
QI V+ GLE +I +++ CA + YA ++F + +V N + G +
Sbjct: 23 QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYE 82
Query: 78 NEFHRTVVVLFTQMKKLD-AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
++ + ++ F +M++ + P+ F+F ++K+ + ++R G +LHC L +G ++F
Sbjct: 83 SDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLF 142
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
VGT LI +Y GE CG + AR +F+ PE +
Sbjct: 143 VGTTLISMY-------------GE------------------CGFVGFARKVFDEMPEPN 171
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
I WN +V+ +M R+LFD MP ++++SWN ML+GY G++E + +F EMP
Sbjct: 172 AIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPM 231
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
++ SW+ +I G+A+NG F E F+ + +G + PN+ ++ VLSACA+ GAL+F K
Sbjct: 232 KDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKG-MRPNETSLTGVLSACAQAGALEFGKI 290
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLITWNTIISGLAMHG 375
+H + E +G V V NAL+D Y+KCG + A VF M+ +++++W ++++ LAMHG
Sbjct: 291 LHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHG 350
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G A+ +FH+M+ +G PD I FI +L AC+H GLVE+G YF M Y+I P IEHY
Sbjct: 351 HGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHY 410
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GCMVDL RAG+L +A +FV +MPI A+IW LLG+C ++ +V+LAE ERL+EL+P
Sbjct: 411 GCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDP 470
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N ++ V+LSN Y G+WKD A ++ +M + K PG S IEV++++
Sbjct: 471 NNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIM 519
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/551 (36%), Positives = 303/551 (54%), Gaps = 47/551 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++A A+L + AR +F I D + S+NA+ AQ+ ++ M D + N
Sbjct: 832 LLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLN 891
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++F L +C R G ++H LV K+ ++++G+AL+++Y+ + E A +VF
Sbjct: 892 AYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFE 951
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-----------------------ELAPER- 195
M ERN+V W S+I Y G + A LF LA +R
Sbjct: 952 AMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADRE 1011
Query: 196 ----------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
D++L N +V Y AR +FD+M + V+S ++++GYA
Sbjct: 1012 GRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYA 1071
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
+ +VE+ + +F +M E+NV +WN LI YA NG E L F R+ E V+P T
Sbjct: 1072 RSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRES-VWPTHYTYG 1130
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVF 353
VL+AC + L + HV+ G+ + +V VGN+L+DMY K G I++ VF
Sbjct: 1131 NVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 1190
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
M +D ++WN +I G A +GR AL LF M + E PD +T IG+L AC H GLVE
Sbjct: 1191 ERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVE 1250
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EG YF+SM D+ I+P +HY CM+DLL RAG L E + +K M +E DAV+WA+LLGS
Sbjct: 1251 EGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGS 1310
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
CR++KNVE+ E A +L EL+P+N +V+LSN+Y +LG+W DV R++ +M+ G K P
Sbjct: 1311 CRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQP 1370
Query: 534 GCSSIEVNEVV 544
GCS IE+ V
Sbjct: 1371 GCSWIEIGRKV 1381
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 252/491 (51%), Gaps = 44/491 (8%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR+ FD I + N +SWN + Y V +F +M P +T + +C
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
NAL EG +H VL++G+ ++ V ++++++Y+ A++AA +F +++V+ TS+
Sbjct: 265 NNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSI 324
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DV 228
++G SCG I A+ +FE ER+++ WN +++GYI ++ A LF QM ++ D
Sbjct: 325 VSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDA 384
Query: 229 ISWNTMLSG-----------------------------------YANNGDVEECKRL--F 251
I+ ++LS Y+ G + +RL F
Sbjct: 385 ITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLF 444
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E ER+ +SWN LI GY + + L A +M +E V PN +T + L+ACA + L
Sbjct: 445 EMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE--VTPNQSTFSSALAACANIFLL 502
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+H Y GY+ + + + LIDMY KC + ++ +F + ++D+I WN++I G
Sbjct: 503 KQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGC 562
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A G+G L LF EM+ G D +TF+G L +C G V G SYF M MD SI+P+
Sbjct: 563 AYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLM-MDESIIPR 621
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHY CM++LL + G + E DFV+ MP E +W + CR Y N +L E A + +
Sbjct: 622 IEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCIN 681
Query: 492 ELEPKNPANFV 502
+ P P FV
Sbjct: 682 DSNPLTPVQFV 692
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 231/517 (44%), Gaps = 49/517 (9%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+ + G+ S HL + TS ++ R I + A + AR++FD +
Sbjct: 52 LATSHGSLSAARRIATHLAASSSASSTSRSSVPTFLFNRAIESLAACGSVADARELFDLM 111
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
++ SWNA+ ++ + LF+ M L P T VL C + L
Sbjct: 112 PLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGAR 171
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---- 176
+LH + K F++N+ +GTAL+++Y + A + F ++ E N + W ++ Y
Sbjct: 172 QLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAG 231
Query: 177 ----------------------------ISCGD---IVSARCLFEL----APERDVILWN 201
++C D + RC+ E V + +
Sbjct: 232 MGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRS 291
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++V Y M A+ LF+ P KD++ +++SG A+ G + + KR+FE M ERN+ S
Sbjct: 292 SVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVS 351
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW--VHV 319
WN ++ GY + L F++M E R F + T+ +VLSAC G LD K VH
Sbjct: 352 WNAMLTGYIRSMDLTGALLLFQQMRQETREF-DAITLGSVLSACT--GILDIGKGEEVHA 408
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENA--VDVFNSMDTKDLITWNTIISGLAMHGRG 377
+A G+ + + NAL+ MY+KCG + +A + +F +D +WN++ISG H
Sbjct: 409 FAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMS 468
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL +M++ P+ TF L AC ++ L+++G+ M + I
Sbjct: 469 EAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR-SV 526
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
++D+ + + ++ + P D ++W +++ C
Sbjct: 527 LIDMYCKCRQFDYSIRIFEARP-SRDVILWNSMIFGC 562
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 185/403 (45%), Gaps = 49/403 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V S K YI ++ A+ + AR++F+ + ++N+VSWN++ Y QN
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG-FRANIFVG 138
+VLF M K +P+ T V+ +C + A REG ++H V+K+ FR ++ +
Sbjct: 973 PVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLS 1032
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ AA VF M R+VV TS+I GY ++ A+ +F E++VI
Sbjct: 1033 NALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVI 1092
Query: 199 LWNTIVSGYIDVRNMIEARKL--------------------------------------- 219
WN +++ Y EA +L
Sbjct: 1093 AWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHV 1152
Query: 220 ------FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
FD P+ DV N+++ Y G +++ ++FE M R+ SWN +I G+A NG
Sbjct: 1153 LKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNG 1212
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCV 332
+ L F+RML + P+ T++ VLSAC G ++ ++ E +G +
Sbjct: 1213 RAKDALHLFERMLCS-KESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDH 1271
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ID+ + G ++ ++ M + D + W +++ +H
Sbjct: 1272 YTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 5/330 (1%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
+ L NT+VS Y + + +AR++FD++P + S+N +LS +A G + + LF +P
Sbjct: 794 ETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP 853
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+ + S+N +I A + + L M + V N + + LSACA
Sbjct: 854 DPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVL-NAYSFASALSACAAEKDSRTGV 912
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
VH + + +V +G+AL+DMYAKC E A VF +M +++++WN++I+ +G
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
AL LF M AG +PD +T ++ AC + EG + +
Sbjct: 973 PVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLS 1032
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
+VD+ A+ GR A RM + + + G R NVE A++ ++ E
Sbjct: 1033 NALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARS-ANVEDAQMVFSQMVE--- 1088
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
KN + +L Y G ++ R+ V ++
Sbjct: 1089 KNVIAWNVLIAAYAQNGEEEEALRLFVRLK 1118
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 173/418 (41%), Gaps = 92/418 (22%)
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM---- 223
++ I +CG + AR LF+L P RD WN I++ + EA LF M
Sbjct: 87 LFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLG 146
Query: 224 --PK---------------------------------KDVISWNTMLSGYANNGDVEECK 248
PK +VI ++ Y N + + +
Sbjct: 147 IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADAR 206
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
R F+++ E N SWN ++ Y G+ +D F RML+ G V P T+ + AC
Sbjct: 207 RAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAG-VRPLGYTVSHAVLACRDN 265
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL+ + +H + +GY+ +V V ++++DMYAKCG ++ A +FN KD++ +I+
Sbjct: 266 NALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIV 325
Query: 369 SGLAMHGRGA-------------------------------GALSLFHEMKNAGEMPDGI 397
SGLA GR A GAL LF +M+ D I
Sbjct: 326 SGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAI 385
Query: 398 TFIGILCACTHMGLVEEG---------LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
T +L ACT + + +G +F S + ++V GC+ R
Sbjct: 386 TLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCL--------RS 437
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
AE + + M E D+ W +L+ Y+ ++E AL LT+++ + N S+
Sbjct: 438 AERL-LLFEMGSERDSYSWNSLISG---YERHSMSEAALYALTKMQSEVTPNQSTFSS 491
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 40/264 (15%)
Query: 36 ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
++ I++ A ++ A+++F+ + ++N+VSWNAM GY ++ ++LF QM++
Sbjct: 320 MSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQET 379
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
+ T VL +C I + +GEE+H +K GF ++ + AL+ +YS + +A
Sbjct: 380 REFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAE 439
Query: 156 K--VFGEMDERNVVVWTSMINGY-------------------------------ISCGDI 182
+ +F ER+ W S+I+GY +C +I
Sbjct: 440 RLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANI 499
Query: 183 VSARCLFELAP-------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML 235
+ ++ E D IL + ++ Y R + ++F+ P +DVI WN+M+
Sbjct: 500 FLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMI 559
Query: 236 SGYANNGDVEECKRLFEEMPERNV 259
G A +G E LF+EM ++ +
Sbjct: 560 FGCAYSGKGEYGLDLFDEMQKQGI 583
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
N L+ YA+ G + +A VF+ + + ++N ++S A GR A A +LFH + +
Sbjct: 799 NTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPD---- 854
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMD------YSIVPQIEHYGCMVDLLARAGR 447
PD ++ ++ A + L + +M D YS + C + +R G
Sbjct: 855 PDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALS--ACAAEKDSRTGV 912
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
A+ V + P D I + LL +Y E E A + +N ++ L
Sbjct: 913 QVHAL--VSKSPHAKDVYIGSALLD---MYAKCEWPEEARRVFEAMPERNIVSWNSLITC 967
Query: 508 YGDLGRWKDVARIKVAMRDTGF 529
Y G + + V+M GF
Sbjct: 968 YEQNGPVGEALVLFVSMMKAGF 989
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI ++ G E D + +I + +Q Y+ ++F+ ++V+ WN+M G A +
Sbjct: 507 QIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSG 566
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M+K + TF L SC+ +R G L++ I
Sbjct: 567 KGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYE 626
Query: 140 ALIEL 144
+IEL
Sbjct: 627 CMIEL 631
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/564 (36%), Positives = 301/564 (53%), Gaps = 39/564 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT---YARKMFDKITDQNVVSWNA 70
+ K Q+ ++ GL + I R I A T Y + + SW
Sbjct: 16 SVKQAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHSKSPDSFSWAC 75
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
Q+ + L+ QM++ P F LK+C +I G +H V K G
Sbjct: 76 AIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQVQKFG 135
Query: 131 FRAN---IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
F I+V TAL++ Y +E A K+F EM ERNVV W SM+ GY+ GD+V A+
Sbjct: 136 FSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQR 195
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F+ P++DVI WN+++SGY +M +A LF QMP+++ SWN M+SG+ GD++
Sbjct: 196 VFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSA 255
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNG-----------------LFF-------------- 276
+ F+ MP++N SW +I GY+ G L F
Sbjct: 256 RSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPN 315
Query: 277 EVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E L+ F ML V P++ T+ +V+SAC++LG L F W+ Y G + + + A
Sbjct: 316 EALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATA 375
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+D+YAKCG I+ A ++F+ + KDL+ + +I G ++G+ A+ LF EM +A P+
Sbjct: 376 LLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPN 435
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITFIG+L A H GLVEEG F SM Y++VP ++HYG MVDL RAGRL EA++ +
Sbjct: 436 SITFIGLLTAYNHAGLVEEGYRCFTSMK-KYNLVPSVDHYGIMVDLFGRAGRLQEALELI 494
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
K MP++ A +W LL +CR++ NVE E+A + ELEP +LSNIY RW
Sbjct: 495 KSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWD 554
Query: 516 DVARIKVAMRDTGFKKLPGCSSIE 539
DV R++ ++ GF K+PGCS +E
Sbjct: 555 DVKRLRKVTKEKGFSKIPGCSWME 578
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 299/539 (55%), Gaps = 34/539 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNV 65
+E+ ++ + Q ++ +GL + +++ A + K ++YA + ++I N
Sbjct: 16 TERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIESPNG 75
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+ N++ YA + + +F +M P+ ++F VLK+C EG ++H L
Sbjct: 76 FTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 135
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K+ ++FV LI +Y E A KV M
Sbjct: 136 FMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRM------------------------ 171
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
P RD + WN+++S Y+D + EAR LFD+M +++V SWN M+SGYA G V+
Sbjct: 172 -------PVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVK 224
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E + +F+ MP ++V SWN ++ YA+ G + EVL+ F ML + P+ T+V VLSAC
Sbjct: 225 EAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSAC 284
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LG+L +WVHVY + +G + V AL+DMY+KCG I+ A++VF +D+ TWN
Sbjct: 285 ASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWN 344
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+II+GL++HG G AL +F EM G P+GITFIG+L AC H+GL+++ F+ M
Sbjct: 345 SIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSV 404
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I P IEHYGCMVDLL R G+ EA + V +P + +++ +LLG+C+ + +E AE
Sbjct: 405 YGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAER 464
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RL E P+ + +V +SN+Y GRW + ++ MR KK PGCS IEV+ VV
Sbjct: 465 IANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVV 523
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/565 (35%), Positives = 314/565 (55%), Gaps = 42/565 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+ GLE +++ +I A+ ++ RK+FD + ++NVVSW ++ NGY+ +
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRD 210
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V LF QM + PN T V+ +C K+ L G+++ + + G + +
Sbjct: 211 LSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN 270
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---------------------- 177
AL+++Y I AA ++F E +N+V++ ++++ Y+
Sbjct: 271 ALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330
Query: 178 ----------SC---GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR----KLF 220
+C GD+ + + W+ I + ID+ R K+F
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ MP K V++WN++++G +GD+E R+F+EM ER++ SWN +IG +F E ++
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIE 450
Query: 281 AFKRMLTEGRVFPND-ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F+ M +G P D T+V + SAC LGALD +KWV Y E N ++ +G AL+DM
Sbjct: 451 LFREMQNQG--IPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDM 508
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
+++CG +A+ VF M+ +D+ W I +AM G GA+ LF+EM PD + F
Sbjct: 509 FSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVF 568
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ +L AC+H G V++G F SM + I P I HYGCMVDLL RAG L EAVD ++ MP
Sbjct: 569 VALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP 628
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
IE + V+W +LL +CR +KNVELA A E+LT+L P+ V+LSNIY G+W DVAR
Sbjct: 629 IEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVAR 688
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
+++ M++ G +K+PG SSIEV ++
Sbjct: 689 VRLQMKEKGVQKVPGSSSIEVQGLI 713
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 276/606 (45%), Gaps = 61/606 (10%)
Query: 13 ETTKHLHQIQTQVVTSGL--EKSDYITPRIITACAQ---LKQMTYARKMFDKITDQNVVS 67
+T K L Q+ ++ GL K ++I + Q L+ + YAR F D N+ S
Sbjct: 36 KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGD-DDGNMAS 94
Query: 68 ---WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+N + GYA ++L+ QM + +P+ +TFP +L +C KI AL EG ++H
Sbjct: 95 LFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHG 154
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
VLK G +IFV +LI Y+ ++ K+F M ERNVV WTS+INGY
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKE 214
Query: 185 ARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLS 236
A LF E E + + ++S ++++ +K+ + + I N ++
Sbjct: 215 AVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVD 274
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y GD+ +++F+E +N+ +N ++ Y ++ +VL ML +G P+
Sbjct: 275 MYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGP-RPDKV 333
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+++ ++ACA+LG L K H Y NG +G + NA+IDMY KCG E A VF M
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHM 393
Query: 357 DTKDLITWNTIISGLAMHGR-----------------------GA--------GALSLFH 385
K ++TWN++I+GL G GA A+ LF
Sbjct: 394 PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFR 453
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM+N G D +T +GI AC ++G ++ + + I ++ +VD+ +R
Sbjct: 454 EMQNQGIPGDRVTMVGIASACGYLGALDLA-KWVCTYIEKNDIHVDLQLGTALVDMFSRC 512
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA-ELALERLTELEPKNPANFVML 504
G + A+ KRM + D W +G + N E A EL E L + + FV L
Sbjct: 513 GDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVAL 571
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEAN 564
G ++ +M +K G +V GC+ L R ++ +
Sbjct: 572 LTACSHGGSVDQGRQLFWSM-----EKAHGIRP----HIVHYGCMVDLLGRAGLLEEAVD 622
Query: 565 MIKLLP 570
+I+ +P
Sbjct: 623 LIQSMP 628
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 192/414 (46%), Gaps = 34/414 (8%)
Query: 104 PIVLKSCVKI----NALREGEELHCLVLKNGF-----RANIFVGTALIELYSTGKAIEAA 154
PI S K+ L+E ++LHC ++K G +N+ A T ++++ A
Sbjct: 22 PITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYA 81
Query: 155 YKVFGEMDER--NVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSG 206
FG+ D ++ ++ +I GY S G A L+ + P++ + ++S
Sbjct: 82 RNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPF--LLSA 139
Query: 207 YIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
+ + E ++ + K D+ N+++ YA G V+ ++LF+ M ERNV SW
Sbjct: 140 CSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSW 199
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
LI GY+ L E + F +M E V PN T+V V+SACA+L L+ K V Y
Sbjct: 200 TSLINGYSGRDLSKEAVSLFFQM-GEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYIS 258
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
G + + + NAL+DMY KCG I A +F+ K+L+ +NTI+S H + L
Sbjct: 259 ELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLV 318
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY----GCM 438
+ EM G PD +T + + AC +G + G S + Y + +E + +
Sbjct: 319 ILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKS-----SHAYVLRNGLEGWDNISNAI 373
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+D+ + G+ A + MP V W +L+ ++ELA + + E
Sbjct: 374 IDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIAGLVRDGDMELAWRIFDEMLE 426
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/512 (38%), Positives = 288/512 (56%), Gaps = 68/512 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H ++T S L S R+ + CA +YA+ +F + V WN +A
Sbjct: 35 HAHLLKTNSPLSSLPLS-----RVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + + LF ++++ D P+ +T VLK+C ++ +R G+
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGK---------------- 133
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
+++GY+ +L + +
Sbjct: 134 -----------------------------------IVHGYVE-----------KLGLQSN 147
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ L N IV Y + ARK+FD+MP++DVI+WN M++ GD E +LF EMPE
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RNV SW +IGGYA G E +D F M G + PN+ T+V VL ACA +G L +
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAG-LLPNEVTVVAVLVACADMGNLVLGRR 266
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H ++ +GY+ N+ V N LIDMY KCG +E+A +F++M+ + +++W+ +I+GLA HGR
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGR 326
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
AL+LF++M N G P+ +TFIGIL AC+HMG+VE+G YF SM DY IVP+IEHYG
Sbjct: 327 AEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYG 386
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CMVDL +RAG L EA +F+ MPI + V+W LLG C+V+KNV+LAE A L++L+P
Sbjct: 387 CMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPL 446
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
N +V+LSNIY + GRW+DVAR++ MRD G
Sbjct: 447 NDGYYVVLSNIYAEAGRWEDVARVRKLMRDRG 478
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 310/536 (57%), Gaps = 36/536 (6%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ L + Q++ GL ++I+ CA + YA++MFD+I N +N++
Sbjct: 2 RGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIR 61
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GY+ ++ V+LF +M PN FT P VLK+C +A E +H L +K G +
Sbjct: 62 GYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGS 121
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+FV ALI +Y I A K+F ++ ++ ++
Sbjct: 122 LVFVQNALIAVYVVCGLIHCARKLFDDITDKTLI-------------------------- 155
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
D+I+ N +V Y N+ A+ +FD+ +K+V+SW +M+S YA +G +E +++F++
Sbjct: 156 --DIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQ 213
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP +NV SWN +I Y G + E LD F +M RV P++AT+V++L+AC++LG L
Sbjct: 214 MPGKNVVSWNSMISCYLREGQYREALDLFNKM-RNSRVVPDEATLVSILAACSQLGDLVM 272
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K +H Y N V + N+LIDMYAKCG + A+D+F M K+L++WN II LA+
Sbjct: 273 GKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALAL 332
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G A+ LF EM+ G +PD IT G+L AC+H GLV+ GL YF M + Y + +IE
Sbjct: 333 HGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIE 392
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY CMVDLL R G L EA++ + RMP++ D V+W LLG+CR++ NVE+ + L++L EL
Sbjct: 393 HYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLEL 452
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCL 549
EP + +V++SNIY + RW+DV +I+ M D G KK SSIE++ GC+
Sbjct: 453 EPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEID-----GCI 503
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 317/584 (54%), Gaps = 74/584 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ + KHL + ++ GL++ Y+ +++ Y+ ++F + + N+ +N
Sbjct: 18 QGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFN 77
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M +G N+ + + ++ M+K P+ FTFP +LK+C ++ + G +LH LV+K
Sbjct: 78 TMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKA 137
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G E + V TS+++ Y CG
Sbjct: 138 GC-------------------------------ESDAFVNTSLVSLYGKCG--------- 157
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC-- 247
+ID A K+FD +P+K+V +W ++SGY G E
Sbjct: 158 -----------------FID-----NAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAID 195
Query: 248 --KR---LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+R +F+ M E+++ SW+ +I GYA+NGL E LD F +ML EG P+ +V VL
Sbjct: 196 MFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEG-FRPDCYAMVGVL 254
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACARLGAL+ W + N + GN +G ALIDMYAKCG +++A +VF M KD++
Sbjct: 255 CACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIV 314
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
WN ISGLAM G A LF +M+ +G PDG TF+G+LCACTH GLV+EG YF SM
Sbjct: 315 VWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSM 374
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+++ P+IEHYGCMVDLL RAG L EA VK MP+EA+A++W LLG CR++++ +L
Sbjct: 375 ERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQL 434
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E L++L LEP N N+V+LSNIY +W+D A+I+ M + G KK+PG S IEV+
Sbjct: 435 VEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDG 494
Query: 543 VV---MLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVVIF 583
VV ++G S L K I ++K L + + T V+F
Sbjct: 495 VVHEFLVGDTSHPLSEK-IYAKLGELVKDLKASGYVPTTDYVLF 537
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/574 (34%), Positives = 312/574 (54%), Gaps = 43/574 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E T + L QIQ ++ +G+ + R+I CA + YA +F+++ N
Sbjct: 165 ESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFM 224
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GY F M +L + +F LK+C + + EGE ++C+V
Sbjct: 225 WNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVW 284
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS--CGD---- 181
K GF + V LI Y+ ++ A +VF E +++VV WT+MI+GY + C +
Sbjct: 285 KMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAME 344
Query: 182 -------------------IVSA----------RCLFELAPERD----VILWNTIVSGYI 208
+VSA + + E E++ + L N ++ Y+
Sbjct: 345 VFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYV 404
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+++AR+LFD+M KDV SW +M++GYA GD+E +R F++ P +N W+ +I G
Sbjct: 405 KCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAG 464
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY-Q 327
Y+ N E L F M+ G V P + T+V+VLSAC +L L+ W+H Y
Sbjct: 465 YSQNNKPKESLKLFHEMMERG-VVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIP 523
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+V + NA++DMYAKCG I+ A +VF++M ++LI+WNT+I+G A +GR A+++F +M
Sbjct: 524 LSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQM 583
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+N G P+ ITF+ +L AC+H GL+ EG YF +M Y I P+ HY CMVDLL R G
Sbjct: 584 RNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGL 643
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA + MP++ W LL +CR++ NVELA L+ L L+P++ +V+L+N
Sbjct: 644 LEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANT 703
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ +W DV R++ M+D G KK+PG S IE++
Sbjct: 704 CANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEID 737
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 323/572 (56%), Gaps = 43/572 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI------TDQ 63
+ ++ +++I +++T+G K+ +T RI+ A ++ +AR +F + +
Sbjct: 25 KNSEDVNKIHARLITNGFIKNPNLTTRIVLDFADSRRSYLAEFARFVFHEYHVCSNGDFE 84
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ WNA+ ++ R ++LF M + + F+ +VLK+C ++ ++EG ++H
Sbjct: 85 DPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQIH 144
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ K G +++++ LI LY + A +VF M R+ V + SMI+GY+ CG I
Sbjct: 145 GFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIE 204
Query: 184 SARCLFELAP----------------------------------ERDVILWNTIVSGYID 209
SAR LF+L P E+D+I WN+++ GY+
Sbjct: 205 SARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDGYVK 264
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
M +A+ LF++MPK+DV++W TM+ GYA G V + K LF+ MP R+V ++N +I GY
Sbjct: 265 HGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGY 324
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
N E + F M E + P++ T+V VLSA A+LG L + +H+Y N ++
Sbjct: 325 VQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLG 384
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+G ALID Y+KCG I+ ++ VF ++ K + WN +I GLA+HG G A + +++
Sbjct: 385 GKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEK 444
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
PD ITFIG+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G +
Sbjct: 445 RSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIE 504
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
A + ++ MPIE + VIW L +C +K E EL + L NP++FV+LSN+Y
Sbjct: 505 LAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYA 564
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
G WK+V R++ M++ +K+PGCS IE++
Sbjct: 565 SFGMWKEVRRVRTTMKERKLRKIPGCSWIELD 596
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 327/575 (56%), Gaps = 46/575 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------- 60
+T++ + +I +++T+GL K+ ++ RI+ A A + +AR +F +
Sbjct: 26 KTSEDVSKIHARLITTGLIKNSNLSTRIVLAFAASPRPYLAEFARLVFREYHVCSSSPGG 85
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
++ WNA+ ++ + + ++LF M + + F+ +VLK+C ++ ++ G
Sbjct: 86 EVEDPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGL 145
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
++H ++ K G +++F+ LI LY + A ++F M +R+ V + SMI+GY+ G
Sbjct: 146 QIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRG 205
Query: 181 DIVSARCLFELAP----------------------------------ERDVILWNTIVSG 206
I SAR LF+L P E+D+I WN+++ G
Sbjct: 206 LIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDG 265
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
Y+ + +A+ LFD MP++DV++W TM+ GYA G V + K LF++MP R+V S+N ++
Sbjct: 266 YVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMM 325
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY N E L+ F M E + P++ T+V VLSA A+LG L + +H+Y +
Sbjct: 326 AGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQF 385
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+G ALIDMY+KCG I++A+ VF ++ K + WN +I GLA+HG G A + +
Sbjct: 386 FLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 445
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 446 IERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 505
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ A + ++ MPIE + VIW L +C +K E EL + L NP+++V+LSN
Sbjct: 506 SIELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSN 565
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y G+WKDV RI+ M++ +K+PGCS IE++
Sbjct: 566 MYASFGKWKDVRRIRTMMKERKIEKIPGCSWIELD 600
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 315/580 (54%), Gaps = 78/580 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIIT-ACAQLKQMTYARKMFDKITDQNVVSW 68
+ L + +QI + + SG+ + ++ +++ + + ++R +F +I NV SW
Sbjct: 36 QNLSHPRSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSW 95
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N MF Y+++ F + L+ M + +P+ ++FP VLK+C +++ L +G E+H LK
Sbjct: 96 NFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLK 155
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G ++FV ALI +S SCG + +AR +
Sbjct: 156 LGVHLDVFVQNALISAFS-------------------------------SCGAVEAARAV 184
Query: 189 FELAPE--RDVILWNTIVSGYIDVRNMIEARKLFDQM-------PKK------------- 226
F++ P RDV+ WN+++SGY+ A K+F ++ P +
Sbjct: 185 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRL 244
Query: 227 --------------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
DV ++++ Y+ G +E+ +++F+ +P RN W +I
Sbjct: 245 GLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMI 304
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDA-TIVTVLSACARLGALDFSKWVHVYAEYNG 325
GYA + LF E ++ F+ M G F DA TI VLSAC GAL +W+H+Y E N
Sbjct: 305 AGYAQSDLFKEAIELFREMQIGG--FAADAATIACVLSACGHWGALAQGRWIHLYCERNS 362
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ ++ NALI MY+KCG I+ A+++F+ + D+ +W+ +ISGLAM+G AL LF
Sbjct: 363 IEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFS 422
Query: 386 EMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+M+ ++ P+ ITF+G+LCAC H G V++GL YF +M Y++ P IEHYGCMVDLL R
Sbjct: 423 QMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGR 482
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
A L EA F++ +PI+ D VIW +LL +CR + N+ELAE A +++ ELEP+ V+L
Sbjct: 483 ANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLL 542
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
SN+Y RW DV R++ M KK PGCS +E++ +V
Sbjct: 543 SNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLV 582
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/574 (36%), Positives = 325/574 (56%), Gaps = 50/574 (8%)
Query: 9 SEQLETTKHLHQIQTQV----VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
S Q T + + +I + V S + +S+++ IT + ++ AR++F+++ D++
Sbjct: 41 SSQFSTCQVVPKISSPVRDFSANSNVARSNWL----ITQLGKEGKIGEARQVFEEMPDRD 96
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-H 123
VVSW A+ GY + LF + DA+ N T+ ++ V+ N + E L
Sbjct: 97 VVSWTAVITGYIKCGMIEEAKTLF---DRNDAIKNVVTWTALVSGYVRWNRIEEARRLFD 153
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ +KN N +IE Y+ I+ A +F +M ERNVV W ++I ++ +
Sbjct: 154 AMPVKNVISWN-----TMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVD 208
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A+ LF PERDVI W T+V+G + +AR LFD+MP ++V+SWNTM+ GYA N
Sbjct: 209 EAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMR 268
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM---------------LTE 288
++E +LFE+MPER + SWN +I G+ NG +D F +M + +
Sbjct: 269 LDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQD 328
Query: 289 GR----------------VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
GR V PN+ T V+VL AC++L AL + +H YQ V
Sbjct: 329 GRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADV 388
Query: 333 GNALIDMYAKCGIIENAVDVFN--SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ALI+MY+KCG +E A +F+ S+ +D+++WN +I+ A HG G A+SLF EM+
Sbjct: 389 VSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQAL 448
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD +T+I +L AC+H GLV+EGL F+++ D SI + +H+ C+VDL RAGRL E
Sbjct: 449 GFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQE 508
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A DF+K + ++ A +WA LL C V+ +++L +L E+L E EP+N +++LSNIY
Sbjct: 509 AFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYAS 568
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+W++ A +++ M+D G KK PGCS IEV V
Sbjct: 569 TGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTV 602
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 40/327 (12%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +++ G + E +++FEEMP+R+V SW +I GY G+ E F R
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR------- 122
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG----NVCVGNALIDMYAKCGIIE 347
NDA I V++ A + + +W + + NV N +I+ YA+ G I+
Sbjct: 123 --NDA-IKNVVTWTALVSG--YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWID 177
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A+D+F M +++++WNT+I+ R A LF+ M D I++ ++ +
Sbjct: 178 QALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER----DVISWTTMVAGLS 233
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
G +++ F M V + + M+ A+ RL EA ++MP E + W
Sbjct: 234 KNGRIDDARLLFDKMP-----VRNVVSWNTMIIGYAQNMRLDEAFKLFEQMP-ERELSSW 287
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
++ +N +L E A++ ++ KN + + + + GR ++ +I
Sbjct: 288 NTMITG--FIQNGKL-ERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKI------- 337
Query: 528 GFKKLPGCSSIEVNE---VVMLGCLSR 551
F ++ ++++ NE V +LG S+
Sbjct: 338 -FSEMQAANNVKPNEGTFVSVLGACSK 363
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/577 (35%), Positives = 321/577 (55%), Gaps = 43/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E ++ L QIQ Q++ +GL + + R+I+ CA + + + Y K+ + + + NV S
Sbjct: 61 ENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFS 120
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WNA+ G ++E + +VL+ +M + P+ +T+ + K C + G E+ V
Sbjct: 121 WNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQV 180
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI--------- 177
LK GF ++++ +I + + A+KVF E R++V W S+INGY+
Sbjct: 181 LKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAM 240
Query: 178 -----------------------SCGDIVS-------ARCLFELAPERDVILWNTIVSGY 207
+C + S R + E + L N ++ Y
Sbjct: 241 GIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMY 300
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ ++ + LFD M KK V+SW TM+ GYA NG ++ +LF +MPE+NV +WN +IG
Sbjct: 301 VKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIG 360
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
L FE L+ F+ M + P+ T++ LSAC++LGALD W H Y + +
Sbjct: 361 SCVQANLSFEALELFREM-QWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLS 419
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+V +G ALIDMYAKCG + A+ VFN M ++ +TW II GLA++G A+ F +M
Sbjct: 420 LDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKM 479
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
++G MPD ITF+G+L AC H GLVEEG YF M +++ PQ +HY CMV+LL RAG
Sbjct: 480 IDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGL 539
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA + +K MP+EADA++W L +C +++N+ + E A +L +L+P + +V+L+N+
Sbjct: 540 LEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANM 599
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y + G+W++ I+ M + G +K PG SSIEVN ++
Sbjct: 600 YREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGII 636
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 199/433 (45%), Gaps = 56/433 (12%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL--YSTGKAIEAAYKVFGEMDE 163
+L++C + L++ + ++ G + F + LI S + ++ K+ +
Sbjct: 59 LLENCKSFSQLKQ---IQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQN 115
Query: 164 RNVVVWTSMINGYISC-----GDIVSARCLFELAPERDVILWN-------TIVSGYIDVR 211
NV W ++I G + G ++ R L D ++ +V Y+
Sbjct: 116 PNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFE 175
Query: 212 NMIEARKL-FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ + K+ FD KD+ +N ++ + G+ ++F+E R++ SWN LI GY
Sbjct: 176 ILGQVLKMGFD----KDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYV 231
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
E + +++M+TE V P++ T++ V+SACA+L +L + +H Y E +G +
Sbjct: 232 RRRQPREAMGIYQQMITE-HVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKI 290
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG--RGAG--------- 379
+ NAL+DMY KCG +E +F++M K +++W T+I G A +G AG
Sbjct: 291 SLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEK 350
Query: 380 --------------------ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
AL LF EM+ + PD +T + L AC+ +G ++ G+ +
Sbjct: 351 NVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGM-WT 409
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ +++ + ++D+ A+ G + +A+ MP +++ W ++G +Y N
Sbjct: 410 HNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGN 468
Query: 480 VELAELALERLTE 492
V A ++ +
Sbjct: 469 VNDAIFYFSKMID 481
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 317/564 (56%), Gaps = 41/564 (7%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITDQNVVS----WNAMFNG 74
+++ +G+ K+ +T RI+ A A + +AR +F + V WNAM
Sbjct: 2 HARLIKTGIIKNSNLTTRIVLAFAASPRPYLAEFARFVFHEYHYGGEVEDPYLWNAMIKS 61
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
++ R ++LF M ++ + F+ +V+K+C ++ ++ G ++H + K G ++
Sbjct: 62 HSHGTDPRRALLLFCLMLEIGVPVDKFSLSLVMKACSRLGFVKGGLQIHGFLKKTGLWSD 121
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP- 193
+F+ LI LY + A ++F M +R+ V + SMI+GY+ CG I SA LF+L P
Sbjct: 122 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPR 181
Query: 194 ---------------------------------ERDVILWNTIVSGYIDVRNMIEARKLF 220
E+D+I WN+++ GY+ + +A+ LF
Sbjct: 182 EMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLF 241
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D +P++DV++W TM+ GYA G V + K LF++MP R+V ++N ++ GY N E L+
Sbjct: 242 DMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALE 301
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F M E + P++ T+V VLSA A+LG L + +H+Y + +G ALIDMY
Sbjct: 302 IFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMY 361
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KCG I++A+ VF ++ K + WN +I GLA+HG G A + +++ PD ITF+
Sbjct: 362 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFV 421
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G + A + ++ MPI
Sbjct: 422 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPI 481
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
E + VIW L +C +K E EL + L NP+++V+LSN+Y G WKDV R+
Sbjct: 482 EPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRRV 541
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVV 544
+ M++ +K+PGCS IE++ V
Sbjct: 542 RTMMKERKIEKIPGCSWIELDGXV 565
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/574 (36%), Positives = 324/574 (56%), Gaps = 50/574 (8%)
Query: 9 SEQLETTKHLHQIQTQV----VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
S Q T + + +I + V S + +S+++ IT + ++ AR++F+++ D++
Sbjct: 41 SSQFSTCQVVPKISSPVRDFSANSNVARSNWL----ITQLGKEGKIGEARQVFEEMPDRD 96
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-H 123
VVSW A+ GY + LF + DA+ N T+ ++ V+ N + E L
Sbjct: 97 VVSWTAVITGYIKCGMIEEAKTLF---DRNDAIKNVVTWTALVSGYVRWNRIEEARRLFD 153
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ +KN N +IE Y+ I+ A +F M ERNVV W ++I ++ +
Sbjct: 154 AMPVKNVISWN-----TMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVD 208
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A+ LF PERDVI W T+V+G + +AR LFD+MP ++V+SWNTM+ GYA N
Sbjct: 209 EAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMR 268
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM---------------LTE 288
++E +LFE+MPER + SWN +I G+ NG +D F +M + +
Sbjct: 269 LDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQD 328
Query: 289 GR----------------VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
GR V PN+ T V+VL AC++L AL + +H YQ V
Sbjct: 329 GRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADV 388
Query: 333 GNALIDMYAKCGIIENAVDVFN--SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ALI+MY+KCG +E A +F+ S+ +D+++WN +I+ A HG G A+SLF EM+
Sbjct: 389 VSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQAL 448
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD +T+I +L AC+H GLV+EGL F+++ D SI + +H+ C+VDL RAGRL E
Sbjct: 449 GFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQE 508
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A DF+K + ++ A +WA LL C V+ +++L +L E+L E EP+N +++LSNIY
Sbjct: 509 AFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYAS 568
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+W++ A +++ M+D G KK PGCS IEV V
Sbjct: 569 TGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTV 602
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 40/327 (12%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +++ G + E +++FEEMP+R+V SW +I GY G+ E F R
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR------- 122
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG----NVCVGNALIDMYAKCGIIE 347
NDA I V++ A + + +W + + NV N +I+ YA+ G I+
Sbjct: 123 --NDA-IKNVVTWTALVSG--YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWID 177
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A+D+F M +++++WNT+I+ R A LF+ M D I++ ++ +
Sbjct: 178 QALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPER----DVISWTTMVAGLS 233
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
G +++ F M V + + M+ A+ RL EA ++MP E + W
Sbjct: 234 KNGRIDDARLLFDKMP-----VRNVVSWNTMIIGYAQNMRLDEAFKLFEQMP-ERELSSW 287
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
++ +N +L E A++ ++ KN + + + + GR ++ +I
Sbjct: 288 NTMITG--FIQNGKL-ERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKI------- 337
Query: 528 GFKKLPGCSSIEVNE---VVMLGCLSR 551
F ++ ++++ NE V +LG S+
Sbjct: 338 -FSEMQAANNVKPNEGTFVSVLGACSK 363
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 304/511 (59%), Gaps = 50/511 (9%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +LK+C I L++ +H ++K + F+ T ++++ + E A +F +
Sbjct: 17 FVPILKNCPNIVELKK---IHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVA 73
Query: 163 ERNVVVWTSMINGYI-------------------------------------SCGDIVSA 185
+ N ++ +MI Y SC ++
Sbjct: 74 DPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCY 133
Query: 186 RC-------LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
+F+ + + ++ N++V Y+ ++ +A K+F++M ++D +SWNT++SG+
Sbjct: 134 DLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGH 193
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
G + + +FEEM ++ +FSW ++ GYA G + + L+ F+RM G + P++ ++
Sbjct: 194 VRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVG-IEPDEISL 252
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V+VL ACA+LGAL+ KW+H YA+ G+ N+CV NALI+MYAKCG I+ +F+ M+
Sbjct: 253 VSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNE 312
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+D+I+W+T+I GLA HGR A+ LF EM+ A P+ ITF+G+L AC H GL+ EGL Y
Sbjct: 313 RDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRY 372
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+SM DY+I P +EHYGC+V+LL +GRL +A++ +K+MP++ D+ IW +LL SCR +
Sbjct: 373 FESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHS 432
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
N+E+A +A+E L ELEP + N+V+LSN+Y DLG+W V+R++ MR KK PGCSSI
Sbjct: 433 NLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSI 492
Query: 539 EVNEVVMLGCLSRELDRKSIVRAEANMIKLL 569
EV+ +V + D K +A ++KLL
Sbjct: 493 EVDNMVQE--FASGDDSKPFSKAIYRVLKLL 521
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 196/405 (48%), Gaps = 49/405 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +I +V L +S ++ +++ C + YA +F ++ D N +NAM Y
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKH 89
Query: 78 NEFHRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N+ + + ++ QM + P+ FTFP V+KSC + G+++H V K G +
Sbjct: 90 NKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 149
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+N V +L+E+Y +++ A+KVF EM ER+ V W ++I+G++ G + AR +FE
Sbjct: 150 SNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEM 209
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS------------------ 230
++ + W IVSGY + +A + F +M + D IS
Sbjct: 210 QDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGK 269
Query: 231 W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
W N ++ YA G ++E +RLF++M ER+V SW+ +I G AN+G
Sbjct: 270 WIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHG 329
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVC 331
E ++ F+ M + ++ PN T V +LSACA G L+ + + +YN G
Sbjct: 330 RAHEAIELFQEM-QKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEH 388
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
G L+++ G ++ A+++ M K D W +++S H
Sbjct: 389 YG-CLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHS 432
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/568 (35%), Positives = 320/568 (56%), Gaps = 47/568 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------TDQNVVSW 68
+I +++T+G K+ +T +I+ A A ++ +AR +F + ++ W
Sbjct: 31 KIHARLITTGFIKNSNLTTKIVVAFADSRRPYLAEFARYVFREYHVCSFAPGDVKDPFLW 90
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + ++ R ++ F M + + F+F +VLK+C ++ L+ G ++H + K
Sbjct: 91 NLVIKSHSHGVDPRRALLWFCLMLENGISVDKFSFSLVLKACSRLGFLKGGMQIHGFLRK 150
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G +++F+ LI LY + A ++F M +R+ V + SMI+GYI CG I SAR L
Sbjct: 151 TGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESAREL 210
Query: 189 FELAP----------------------------------ERDVILWNTIVSGYIDVRNMI 214
F+L P E+D+I WN+++ GY+ M
Sbjct: 211 FDLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIYGYVKHGRME 270
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+A+ LF MP++DV++W TM+ GYA G V + K LF++MP R+V ++N ++ GY N
Sbjct: 271 DAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRH 330
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY-AEYNGYQGNVCVG 333
E L+ F M E + P++ T+V VLSA A+LG L + +H+Y E Y G +G
Sbjct: 331 HMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGK-LG 389
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
ALIDMY+KCG I+ A+ VF ++ K + WN +I GLA+HG G A ++ E++
Sbjct: 390 VALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHGLGESAFNILLEIERRSIE 449
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVDLL+R G + A +
Sbjct: 450 PDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLSRCGSIELAKN 509
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
++ MPIE + VIW L +C +K E+ EL + L NP+++V+LSN+Y GR
Sbjct: 510 LIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKHLILQAGYNPSSYVLLSNMYASFGR 569
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVN 541
WKDV ++ M++ +K+PGCS IE++
Sbjct: 570 WKDVRNVRTMMKERKLQKVPGCSWIELD 597
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 300/568 (52%), Gaps = 79/568 (13%)
Query: 20 QIQTQVVTSGLEKSDYIT----PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
++ ++ G E SD I + T C L+ AR++FD++ ++VVSWNA+ GY
Sbjct: 141 KVHEDIIARGFE-SDVIVGTALASMYTKCGSLEN---ARQVFDRMPKRDVVSWNAIIAGY 196
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+QN + LF++M+ PN T V+ C + AL +G+++HC +++G
Sbjct: 197 SQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI---- 252
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
E +V+V ++N Y CG++ +A LFE P R
Sbjct: 253 ---------------------------ESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR 285
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV--------------------------- 228
DV WN I+ GY EA F++M + +
Sbjct: 286 DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIH 345
Query: 229 ------------ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
+ N +++ YA G+V +LFE MP++NV +WN +I GY+ +G
Sbjct: 346 GYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPH 405
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E L F M +G + P+ IV+VL ACA AL+ K +H Y +G++ NV VG L
Sbjct: 406 EALALFIEMQAQG-IKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGL 464
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+D+YAKCG + A +F M +D+++W T+I +HG G AL+LF +M+ G D
Sbjct: 465 VDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDH 524
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
I F IL AC+H GLV++GL YFQ M DY + P++EHY C+VDLL RAG L EA +K
Sbjct: 525 IAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIK 584
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
M +E DA +W LLG+CR++ N+EL E A + L EL+P N +V+LSNIY + RW+D
Sbjct: 585 NMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWED 644
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVNEVV 544
VA+++ M++ G KK PGCS + V+ V
Sbjct: 645 VAKLRKMMKEKGVKKQPGCSVVAVHRDV 672
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
N W I GY NG + + L + +M G + P+ ++V+ AC L + V
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTG-INPDKLVFLSVIKACGSQSDLQAGRKV 142
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H G++ +V VG AL MY KCG +ENA VF+ M +D+++WN II+G + +G+
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL+LF EM+ G P+ T + ++ C H+ +E+G A+ I +
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-KQIHCYAIRSGIESDVLVVNG 261
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+V++ A+ G + A +RMPI D W ++G
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIG 295
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 296/530 (55%), Gaps = 40/530 (7%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTY-----ARKMFDKITDQNVVSWNAM 71
HL Q ++ +G + YI ++ + A + Y + ++FD + NV WN M
Sbjct: 50 HLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCM 109
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+N ++L+ +M + PN +T+P VLK+C + EG ++H ++K+G
Sbjct: 110 IKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGL 169
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ + ++ I +Y++ FG + E + R L +
Sbjct: 170 GGDGHILSSAIRMYAS----------FGRLVE--------------------ARRILDDK 199
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-WNTMLSGYANNGDVEECKRL 250
E D + WN ++ GY+ + AR+LF+ MP + +IS WN M+SG++ G VE +
Sbjct: 200 GGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREF 259
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+EM ER+ SW+ +I GY G F E L+ F +M E ++ P + +VLSACA LGA
Sbjct: 260 FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKE-KIRPRKFVLPSVLSACANLGA 318
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
LD +W+H YA+ N Q + +G +L+DMYAKCG I+ A +VF M K++ +WN +I G
Sbjct: 319 LDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 378
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LAMHGR A+ LF +M P+ ITF+G+L AC H GLV++GL+ F SM +Y + P
Sbjct: 379 LAMHGRAEDAIDLFSKMDI---YPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEP 435
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
QIEHYGC+VDLL RAG L EA V +P E +W LLG+CR + NVEL E + L
Sbjct: 436 QIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKIL 495
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELEP+N + +LSNIY GRW++V ++ M++ G K PG S I++
Sbjct: 496 LELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 545
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 6/188 (3%)
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI-----IENAVDVFNSMDTKDLITW 364
+L K H G+ + + +L+ YA E+++ VF+ + ++ W
Sbjct: 47 SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLW 106
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +I + A+ L++EM A P+ T+ +L AC+ G+V EG+ + +
Sbjct: 107 NCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHL-V 165
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ + + + A GRL EA + E DAV W ++ + VE A
Sbjct: 166 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 225
Query: 485 LALERLTE 492
E + +
Sbjct: 226 ELFEGMPD 233
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/533 (36%), Positives = 302/533 (56%), Gaps = 10/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q++ +G + + ++ A+ + + A KMFD++ ++++V WN + +GYAQN
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG 255
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F +T + L +M++ P+ T +L + + +LR G +H ++ GF + + V T
Sbjct: 256 FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVST 315
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+++YS ++ A +F M + VV W SMI+GY+ GD +A +F+ + V +
Sbjct: 316 ALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
Query: 200 WNTIVSGYI-------DVRNMIEARKLFDQMP-KKDVISWNTMLSGYANNGDVEECKRLF 251
N V G + DV KL DQ+ DV N+++S Y+ V+ +F
Sbjct: 376 TNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIF 435
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E + + + SWN +I GYA NG E +D F +M + + P+ T+V+V+ A A L L
Sbjct: 436 ENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN-IKPDSFTMVSVIPALAELSVL 494
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+KW+H NV V AL+DMYAKCG + A +F+ MD + + TWN +I G
Sbjct: 495 PQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGY 554
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G AL LF +MK P+ +TF+ +L AC+H GLVEEG YF SM DY + P
Sbjct: 555 GTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPA 614
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HYG MVDLL RA RL EA DF+++MPIE ++ +LG+CR++KNVEL E A R+
Sbjct: 615 MDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIF 674
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
+L+P + V+L+NIY W VAR++ M G +K PG S +E+ NEV
Sbjct: 675 DLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEV 727
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 235/493 (47%), Gaps = 14/493 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E + K LHQ ++ +GL ++++ + + A ++F I D+ ++
Sbjct: 85 ELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYH 144
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+N V F +M+ P + F +LK C LR+G+E+HC ++ N
Sbjct: 145 TMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVN 204
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +N+F T ++ +Y+ + +E AYK+F M ER++V W ++I+GY G +A L
Sbjct: 205 GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELV 264
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANN 241
E D I +I+ DV ++ R + + S+ ++ Y+
Sbjct: 265 LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKC 324
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G V + +F+ M + V SWN +I GY NG ++ F++M+ E +V + T++
Sbjct: 325 GSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDE-QVEMTNVTVMGA 383
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACA LG ++ ++VH + +V V N+LI MY+KC ++ A ++F ++ K L
Sbjct: 384 LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTL 443
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
++WN +I G A +GR A+ F +M+ PD T + ++ A + ++ + +
Sbjct: 444 VSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA-KWIHG 502
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
+ + + + +VD+ A+ G + A M E W ++ Y
Sbjct: 503 LVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDG---YGTHG 558
Query: 482 LAELALERLTELE 494
L + ALE +++
Sbjct: 559 LGKAALELFEKMK 571
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 292/505 (57%), Gaps = 9/505 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I++ A ++ AR FD +++ VSWN M Y +N LF + DA+
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAI-- 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V+ + E EL + ++ ++ Y+ + A ++F
Sbjct: 195 --SWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
R+V WT++++GY G + AR +F+ PER+ + WN +V+ YI R M EA++L
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+ MP ++V SWNTML+GYA G +EE K +F+ MP+++ SW ++ Y+ G E L
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F M G + N + VLS CA + AL+ +H GY VGNAL+ M
Sbjct: 369 QLFIEMGRCGE-WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG +E+A + F M+ +D+++WNT+I+G A HG G AL +F M+ PD IT
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC+H GLVE+G+SYF SM D+ + + EHY CM+DLL RAGRLAEA D +K MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
E D+ +W LLG+ R+++N EL A E++ ELEP+N +V+LSNIY G+W+D +
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
++V M + G KK+PG S IEV V
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKV 632
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 80/366 (21%)
Query: 143 ELYSTGKAIEA---------AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
E+ + KAI A A ++F M R+ + +M+ GY + G + A LF P
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
D +NT++ ++ +AR LFD+MP +D +++N M+S +AN+G V + F+
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
PE++ SWNG++ Y NG + E R N T +S
Sbjct: 157 APEKDAVSWNGMLAAYVRNG-----------RVEEARGLFNSRTEWDAIS---------- 195
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
W NAL+ Y + G + A ++F+ M +D+++WN ++SG A
Sbjct: 196 --W-----------------NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 236
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG------------------ 415
G A LF +A + D T+ ++ G++EE
Sbjct: 237 RGDMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAM 292
Query: 416 -LSYFQSMAMD-----YSIVP--QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+Y Q MD ++++P + + M+ A+AG L EA MP + DAV W
Sbjct: 293 VAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSW 351
Query: 468 ANLLGS 473
A +L +
Sbjct: 352 AAMLAA 357
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 138/311 (44%), Gaps = 36/311 (11%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A++ YS + A +F + + + ++++ + AR LF+ P RD +
Sbjct: 74 AMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT 133
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+N ++S + + + AR FD P+KD +SWN ML+ Y NG VEE + LF E +
Sbjct: 134 YNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDA 193
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-------- 311
SWN L+ GY G E + F RM V N ++S AR G +
Sbjct: 194 ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN-----IMVSGYARRGDMVEARRLFD 248
Query: 312 -----DFSKWVHVYAEY--NGY------------QGNVCVGNALIDMYAKCGIIENAVDV 352
D W V + Y NG + N NA++ Y + +++ A ++
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
FN M +++ +WNT+++G A G A ++F M D +++ +L A + G
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCS 364
Query: 413 EEGLSYFQSMA 423
EE L F M
Sbjct: 365 EETLQLFIEMG 375
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +++ +G ++ ++ + M AR F+++ +++VVSWN M GYA++
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVG 138
F + + +F M+ P+ T VL +C + +G + + G A
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 523
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L + A+ + +M E + +W S I+ G +A +FEL
Sbjct: 524 TCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR-SAAEKIFELE 582
Query: 193 PERD---VILWNTIVSG--YIDVRNM 213
PE V+L N S + D R M
Sbjct: 583 PENAGMYVLLSNIYASSGKWRDARKM 608
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/552 (35%), Positives = 307/552 (55%), Gaps = 71/552 (12%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
++D A T + L ++ VV + +S Y+ +I+ C +++T+A ++F ++
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQV 72
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-------NCFTFPIVLKSCVKI 113
D N+ NAM YAQN HR V ++ +M + P + FT+P +LK+C
Sbjct: 73 RDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG-- 130
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
GTA +EL GK +
Sbjct: 131 ------------------------GTAALEL---GKQVHT-------------------- 143
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
+V + C + I+ N+++ Y ++ A K+FD+M ++DV+SWN
Sbjct: 144 -------HVVRSGC------DSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++S +A G + + LF MP++ + +W ++ GY G + +DAF+ M TEG P
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEG-FEP 249
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+D +IV VL ACA+LGAL+ +W++ Y + +G + + NAL++MYAKCG I+ A+ +F
Sbjct: 250 DDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLF 309
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLV 412
+ M KD+I+W+T+I GLA HGR A+ LF EM+ G++ P+ ITF+G+L AC++ GLV
Sbjct: 310 DGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLV 369
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EGLS+F M Y + P +EHYGC+VDLL R+G++ A+D V+ MP+ ADA +W +LL
Sbjct: 370 DEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLS 429
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CR + +V+ A LA ERL ELEP + N VML+N+Y RW DVA + A+R +K
Sbjct: 430 ACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKT 489
Query: 533 PGCSSIEVNEVV 544
PGCS IEV VV
Sbjct: 490 PGCSLIEVGNVV 501
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/480 (40%), Positives = 293/480 (61%), Gaps = 4/480 (0%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
++ WN + +A R+++ F++M+++ P+ +TFP VLK+C R G +
Sbjct: 80 RHAFPWNTLVRLHAAASPRRSLL-YFSRMRRVAVAPDAYTFPAVLKACGCAPGCRVGLVV 138
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H ++ G A++F ALI Y + KVF + R++V W SM+ GY+ CG++
Sbjct: 139 HGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVF-DHGVRDLVSWNSMVAGYVGCGEV 197
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANN 241
A+ LF+ +RD W T++ GY ++ ++ AR+LFDQMP +D++ WN+M+ GYA +
Sbjct: 198 DLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARH 257
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G ++E + LFEEMPERNV SW+ +I GY G E L+ F+RML+ G + P+ V
Sbjct: 258 GRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCG-IKPDRVAAVGA 316
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
++ACA+LGAL+ +W+H Y E +V V ALIDMY KCG ++ A +F SM K +
Sbjct: 317 VAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSV 376
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+TWN +I GL HG G A+ LF++M+ D ++ + +L +CTH GLV EGL F
Sbjct: 377 VTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTHAGLVSEGLGIFYR 436
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M D + P++EHYG ++DLL RAGR+ +A + ++ MP+E +W +LL SCR ++ VE
Sbjct: 437 MEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVE 496
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAEL++ERL L + +V+LSNIY D G W DV RI+ M G KK G S IEV+
Sbjct: 497 LAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVD 556
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/552 (35%), Positives = 307/552 (55%), Gaps = 71/552 (12%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
++D A T + L ++ VV + +S Y+ +I+ C +++T+A ++F ++
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQV 72
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-------NCFTFPIVLKSCVKI 113
D N+ NAM YAQN HR V ++ +M + P + FT+P +LK+C
Sbjct: 73 RDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG-- 130
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
GTA +EL GK +
Sbjct: 131 ------------------------GTAALEL---GKQVHT-------------------- 143
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
+V + C + I+ N+++ Y ++ A K+FD+M ++DV+SWN
Sbjct: 144 -------HVVRSGC------DSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++S +A G + + LF MP++ + +W ++ GY G + +DAF+ M TEG P
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEG-FEP 249
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+D +IV VL ACA+LGAL+ +W++ Y + +G + + NAL++MYAKCG I+ A+ +F
Sbjct: 250 DDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLF 309
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLV 412
+ M KD+I+W+T+I GLA HGR A+ LF EM+ G++ P+ ITF+G+L AC++ GLV
Sbjct: 310 DGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLV 369
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EGLS+F M Y + P +EHYGC+VDLL R+G++ A+D V+ MP+ ADA +W +LL
Sbjct: 370 DEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLS 429
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CR + +V+ A LA ERL ELEP + N VML+N+Y RW DVA + A+R +K
Sbjct: 430 ACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKT 489
Query: 533 PGCSSIEVNEVV 544
PGCS IEV VV
Sbjct: 490 PGCSLIEVGNVV 501
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 302/554 (54%), Gaps = 24/554 (4%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL--------------KQMTYARKMFD 58
++ + + QI ++ + +S P II+ C ++ + + YA + +
Sbjct: 37 KSVREIKQIHASIIKANTTRSTTTLP-IISLCTKITSLLQQDVHLADSIQNLWYASSLAN 95
Query: 59 KITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR 117
V +NA+ + N + L+ QM + P+ +T P +LK+C + +A
Sbjct: 96 FCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFI 155
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
E ++H +K G +N+FV L+ Y+ IEA KVF + +++ WT++I Y
Sbjct: 156 EALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYS 215
Query: 178 SCGDIVSA-RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------KDVIS 230
G A F + D + ++S + + +K+ M DV
Sbjct: 216 KMGYPSEAIAAFFRMNCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFL 275
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
N +L Y G ++LF MP +N+ SWN +I G A+ GLF E L F+RM T G
Sbjct: 276 GNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMG- 334
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ P+ T+V VL++CA LG L+ KWVH Y + N + + V NAL+DMYAKCG I+ A
Sbjct: 335 LKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAF 394
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
VF +M KD+ ++ +I G AMHG+ AL++F EM G PD +T +G+L AC+H G
Sbjct: 395 MVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAG 454
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
L+EEG +FQ M+ Y + PQ EHYGCMVDLL RAG ++EA F +MPI DA +W +L
Sbjct: 455 LLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSL 514
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
LG+C+++ VEL E +++L E+EP+ ++++SNIY RW+D + + AM+ K
Sbjct: 515 LGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIK 574
Query: 531 KLPGCSSIEVNEVV 544
K PGCSSIEV+ +V
Sbjct: 575 KTPGCSSIEVDGMV 588
>gi|302142752|emb|CBI19955.3| unnamed protein product [Vitis vinifera]
Length = 488
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 286/505 (56%), Gaps = 71/505 (14%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST-GK 149
MK L N FTF +LK AL +G +H +LK GF +++FV +L+ Y+ +
Sbjct: 1 MKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSE 60
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV----- 204
+ +AY+VF EM ER+V+ W SMI+ Y++ G+I SA L + PER+++ WN++V
Sbjct: 61 NLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSK 120
Query: 205 --------------------------SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
SGY+ + ++ A+ +F QMP+K V+SW M+SGY
Sbjct: 121 AGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGY 180
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A NGD++ + +F MP +NV SWN +I GY +N F + L F ML G P+ T+
Sbjct: 181 ATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTL 240
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+++LSACA LG+L+ KW++ Y + N ++ +GNALIDM+AKCG +ENA +VF+ M
Sbjct: 241 ISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSK 300
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ +ITW T++SGLA++G+ A++LF +M G PD + FI +L ACTH GLVEEG
Sbjct: 301 RCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRV 360
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F M ++ I P+IEHYGCMVDLL RAG+L EA
Sbjct: 361 FDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEA--------------------------- 393
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
++ + EP NP+ ++SN+ GRW+DV +VAMR +K+PGCSSI
Sbjct: 394 ----------KIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSI 443
Query: 539 EVNEVV--MLGCLSRELDRKSIVRA 561
+V V L +R + RK I RA
Sbjct: 444 QVGNRVHEFLAKDTRHVQRKEIYRA 468
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 142/324 (43%), Gaps = 58/324 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ ++ M A +F+++ +N VSWN+M +GY + R +F QM +
Sbjct: 114 VVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPE------ 167
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ TA+I Y+T +++A +F
Sbjct: 168 ---------------------------------KTVVSWTAMISGYATNGDLKSAENIFN 194
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-------ELAPERDVILWNTIVSGYIDVRN 212
M +NVV W +MI+GY+ + A C+F E P++ ++ +I+S + +
Sbjct: 195 HMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLI--SILSACAHLGS 252
Query: 213 MIEARKLFDQMPKKDVISW-----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ E K + KK+ + N ++ +A GDVE K +F M +R + +W ++
Sbjct: 253 L-EHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVS 311
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV--HVYAEYNG 325
G A NG E ++ F +M EG P+D + VLSAC G ++ K V + E+ G
Sbjct: 312 GLAVNGKCREAINLFDKMCLEG-TKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEF-G 369
Query: 326 YQGNVCVGNALIDMYAKCGIIENA 349
+ + ++D+ + G +E A
Sbjct: 370 IKPRIEHYGCMVDLLGRAGKLEEA 393
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 43/287 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN-EFHRTVVVLFTQMKKLDAMP 98
+I+ A + A +F+ + +NVVSWNAM +GY N EF + + V + + P
Sbjct: 176 MISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRP 235
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ T +L +C + +L G+ ++ + KN +I +G ALI++++ +E A +VF
Sbjct: 236 DQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVF 295
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
M +R ++ WT+M++G V+ +C EA
Sbjct: 296 HHMSKRCIITWTTMVSGL-----AVNGKCR--------------------------EAIN 324
Query: 219 LFDQM----PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
LFD+M K D + + +LS + G VEE KR+F++M + F I Y G
Sbjct: 325 LFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQE--FGIKPRIEHY---GC 379
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
++L + L E ++ + + + L+ + L A F +W V +
Sbjct: 380 MVDLLGRAGK-LEEAKIMDQEPSNPSYLTLVSNLSA-SFGRWEDVLS 424
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 301/528 (57%), Gaps = 34/528 (6%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
++ YARK+F+++ ++++ W M GY + R LF + DA N T+ ++
Sbjct: 16 EIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLF---DRWDAKKNVVTWTAMVN 72
Query: 109 SCVKINALREGEEL-HCLVLKNGFRANIFV---------------------------GTA 140
+K N ++E E L + + L+N N V T
Sbjct: 73 GYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTI 132
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
+ L G+ IE A ++F +M +R+VV WT+M+ G G + AR LF+ P R+V+ W
Sbjct: 133 ITALVQCGR-IEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSW 191
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N +++GY R + EA +LF +MP++D+ SWNTM++G+ NG++ ++LF EM E+NV
Sbjct: 192 NAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVI 251
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W ++ GY +GL E L F +ML + PN T VTVL AC+ L L + +H
Sbjct: 252 TWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQM 311
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGA 378
+Q + CV +ALI+MY+KCG + A +F+ + +DLI+WN +I+ A HG G
Sbjct: 312 ISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGK 371
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
A++LF+EM+ G + +TF+G+L AC+H GLVEEG YF + + SI + +HY C+
Sbjct: 372 EAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACL 431
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
VDL RAGRL EA + ++ + E +W LL C V+ N ++ +L E++ ++EP+N
Sbjct: 432 VDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNA 491
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+ +LSN+Y +G+WK+ A +++ M+D G KK PGCS IEV V +
Sbjct: 492 GTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQV 539
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 162/319 (50%), Gaps = 22/319 (6%)
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE- 190
R N+F+ E I+ A KVF EM ER++ +WT+MI GY+ CG I AR LF+
Sbjct: 3 RCNLFISRLCRE-----GEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDR 57
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+++V+ W +V+GYI + EA +LF +MP ++V+SWNTM+ GYA NG ++ L
Sbjct: 58 WDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDL 117
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F MPERNV SWN +I G + F +M V + T+++ A+ G
Sbjct: 118 FRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVV-----SWTTMVAGLAKNGR 172
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
++ ++ + NV NA+I YA+ ++ A+ +F M +D+ +WNT+I+G
Sbjct: 173 VEDARALFDQMPVR----NVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITG 228
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+G A LF EM+ + IT+ ++ GL EE L F M + P
Sbjct: 229 FIQNGELNRAEKLFGEMQE----KNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKP 284
Query: 431 QIEHYGCMVDLLARAGRLA 449
+ G V +L LA
Sbjct: 285 ---NTGTFVTVLGACSDLA 300
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWN 69
L + +HQ+ ++ V + S + +I ++ ++ ARKMFD ++ ++++SWN
Sbjct: 302 LTEGQQIHQMISKTV---FQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWN 358
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M YA + + + + LF +M++L N TF +L +C + EG + +LKN
Sbjct: 359 GMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKN 418
Query: 130 ---GFRANIFVGTALIELYS-TGKAIEAAYKVFGEMDERNVVVWTSM-----INGYISCG 180
R + + L++L G+ EA+ + G +E + VW ++ ++G G
Sbjct: 419 RSIQLREDHYA--CLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIG 476
Query: 181 DIVSARCLFELAPE 194
+V+ + L ++ P+
Sbjct: 477 KLVAEKIL-KIEPQ 489
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/500 (38%), Positives = 296/500 (59%), Gaps = 14/500 (2%)
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+ N+VSW+A+ G+AQN + + + L +M+ PN T VL +C ++ L G+
Sbjct: 7 SKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGK 66
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
E+H V ++GF +N FV L+++Y + +A K+F +NVV + +MI GY G
Sbjct: 67 EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 126
Query: 181 DIVSARCLFELAP--ERDVILWNTIVSGYID----VRNMIEARKLFDQMPKKDVISWNTM 234
++ A+ LF+ +D I WN+++SGY D ++ A+ FD + ++D +WN +
Sbjct: 127 NVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVL 186
Query: 235 LSGYANNGDVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
+SGYA +E + L ++M E NV++WNG+I G+ NG L F M T
Sbjct: 187 ISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSS- 245
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ P+ T+ +L ACARL + K VH ++ GY+ +V +G AL+DMYAKCG I++A+
Sbjct: 246 LRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAM 305
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
V+N + +L++ N +++ AMHG G ++LF M G PD +TF+ +L +C H G
Sbjct: 306 QVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAG 365
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
VE G +F M Y++ P ++HY C+VDLL+RAGRL EA + VK++P + D+V+W L
Sbjct: 366 AVETGHEFFDLMTY-YNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGAL 424
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
LG C ++ NVEL E+A E L ELEP N N+V+L+N+Y GRW D+ R + ++D G
Sbjct: 425 LGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMH 484
Query: 531 KLPGCSSIEVNE--VVMLGC 548
K PGCS IE E V L C
Sbjct: 485 KSPGCSWIEDREDIHVFLSC 504
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 14/247 (5%)
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
E + N+ SW+ +IGG+A NG E L+ RM G PN T+ +VL ACARL L+
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAG-FEPNARTLASVLPACARLQNLN 63
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H Y +G+ N V N L+D+Y +C + +A+ +F+ K+++++NT+I G
Sbjct: 64 LGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYC 123
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+G A LF +M+ G+ D I++ ++ L E L Q +A D
Sbjct: 124 ENGNVEKAKELFDQMELVGK--DTISWNSMISGYADNLLKCEDLKAAQ-LAFDGVTERDT 180
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMP---IEADAVIWANLLGSCRVYKNVELA--ELAL 487
+ ++ A +L + +++M E + W ++ +VE ELAL
Sbjct: 181 ATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG-----HVENGHNELAL 235
Query: 488 ERLTELE 494
TE++
Sbjct: 236 RLFTEMQ 242
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 124/259 (47%), Gaps = 14/259 (5%)
Query: 24 QVVTSGLEKSDYITPRIITA----CAQLKQM-TYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ G+ + D T ++ + C QL+ + +KM + NV +WN + +G+ +N
Sbjct: 169 QLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVEN 228
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + LFT+M+ P+ +T I+L +C ++ + G+++H ++ G+ ++ +G
Sbjct: 229 GHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG 288
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD----IVSARCLFELAPE 194
AL+++Y+ +I+ A +V+ + N+V +M+ Y G I R +
Sbjct: 289 AALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFR 348
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSGYANNGDVEECKRL 250
D + + +++S + + + FD M +V + ++ + G ++E L
Sbjct: 349 PDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYEL 408
Query: 251 FEEMPER-NVFSWNGLIGG 268
+++P + + W L+GG
Sbjct: 409 VKKIPRKPDSVMWGALLGG 427
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 156/400 (39%), Gaps = 78/400 (19%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V G + ++ ++ + M A K+F + +NVVS+N M GY +N
Sbjct: 67 EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 126
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF QM+ +V K + N++ G + L ++
Sbjct: 127 NVEKAKELFDQME------------LVGKDTISWNSMISGYADNLLKCED---------- 164
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ER 195
++AA F + ER+ W +I+GY C + + + L + E
Sbjct: 165 -----------LKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEP 213
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSG-------------- 237
+V WN I+SG+++ + A +LF +M + D+ + +L
Sbjct: 214 NVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVH 273
Query: 238 ---------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
YA G ++ +++ + N+ S N ++ YA +G
Sbjct: 274 AHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGD 333
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E + F+ ML G P+ T ++VLS+C GA++ Y ++ +
Sbjct: 334 EGIALFRNMLGNG-FRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCI 392
Query: 337 IDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+D+ ++ G ++ A ++ + K D + W ++ G + G
Sbjct: 393 VDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWG 432
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L T Q+ + G E +I ++ A+ + +A +++++I++ N+VS NA
Sbjct: 262 RLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNA 321
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M YA + + LF M P+ TF VL SCV A+ G E L+
Sbjct: 322 MLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYN 381
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDI----VSA 185
++ T +++L S ++ AY++ ++ + + V+W +++ G + G++ ++A
Sbjct: 382 VTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAA 441
Query: 186 RCLFELAP 193
L EL P
Sbjct: 442 ESLIELEP 449
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 323/606 (53%), Gaps = 87/606 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ + C +LK++ ++F+K+T ++V+SWN M + Y +R + LF +M +P+
Sbjct: 177 LYSKCGKLKEVC---QLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPD 233
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGF---------------------------- 131
T ++ +C K+ L G+ LH ++ N
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLS 293
Query: 132 -----RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
++ + T L+ Y I+ A ++F +M+ER++V WT+M++GY+ G +
Sbjct: 294 RCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESL 353
Query: 187 CLFE------LAPER---------------------------------DVILWNTIVSGY 207
LF+ + P+ D L N ++ Y
Sbjct: 354 ELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLY 413
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ EA + F+Q+P K SWN+ML G+ +G V++ + F ++PE+++ SWN ++
Sbjct: 414 AKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVN 473
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
Y + LF E + F +M + V P+ T++++LS+CA++GAL+ WV+VY E N
Sbjct: 474 AYVKHDLFNESFEIFCKMQS-SNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIG 532
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ +G ALIDMY KCG +E A ++F + K++ W +++ AM G+ A+ L+ EM
Sbjct: 533 IDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEM 592
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ G PD +TFI +L AC+H GLV+EG YF + Y+I+P I HYGCMVDLL R G
Sbjct: 593 EERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGH 652
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L E V F++RMPIE D IW++L+ +CR + NVELAE A ++L E++P N V+LSNI
Sbjct: 653 LEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNI 712
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM-----------LGCLSRELDRK 556
Y D GRW DV++++ + +TG K PG + IE N VV + C+ ++++R+
Sbjct: 713 YADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLVSADILCMLQDIERR 772
Query: 557 SIVRAE 562
+V+ E
Sbjct: 773 LLVKQE 778
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/559 (23%), Positives = 236/559 (42%), Gaps = 106/559 (18%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I ++T+ L IT +++ + + A ++ + + WN + +
Sbjct: 54 IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGC 113
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ V+ + M + + TF ++ +C K ++ G E+H +LK GF N +
Sbjct: 114 PQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNN 173
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE 194
L+ LYS ++ ++F +M R+V+ W +MI+ Y+ G A LF+ + P+
Sbjct: 174 LMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPD 233
Query: 195 R---------------------------DVILW------NTIVSGYIDVRNMIEARKLFD 221
D LW N +V Y M EA L
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLS 293
Query: 222 QMPKK--DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
+ + DV+ W T++SGY + +++ ++LF++M ER++ SW ++ GY G + E L
Sbjct: 294 RCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESL 353
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ F++M E V P++ +VTVLSAC L D + VH + G + +GNAL+D+
Sbjct: 354 ELFQQMRFEN-VIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDL 412
Query: 340 YAKCGIIENAV-------------------------------DVFNSMDTKDLITWNTII 368
YAKCG ++ A+ D FN + KD+++WNT++
Sbjct: 413 YAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMV 472
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQS---- 421
+ H + +F +M+++ PD T I +L +C +G + G+ Y +
Sbjct: 473 NAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIG 532
Query: 422 ------------------MAMDYSIVPQIEH-----YGCMVDLLARAGRLAEAVDFVKRM 458
+ M Y I QI + M+ A G+ EA+D M
Sbjct: 533 IDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEM 592
Query: 459 P---IEADAVIWANLLGSC 474
++ D V + LL +C
Sbjct: 593 EERGVKPDHVTFIALLAAC 611
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 194/413 (46%), Gaps = 50/413 (12%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+LKSC I RE +H ++ + + + ++ + ++ A+++ E
Sbjct: 41 LLKSCSNI---REFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 166 VVVWTSMINGYISCGDIVSA-RCLFELAPE---RDVILWNTIVSGY---IDVR--NMIEA 216
++W +++ + G C + + + D+ ++ ++ DV+ + +
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
R L + ++ N ++ Y+ G ++E +LFE+M R+V SWN +I Y G++
Sbjct: 158 RILKCGFGRNKSLN-NNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYR 216
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E LD F ML G V P++ T+V+++S CA+L L+ K +H+Y N + N L
Sbjct: 217 EALDLFDEMLVSG-VLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCL 275
Query: 337 IDMYAKCGIIENA-----------VDV----------------------FNSMDTKDLIT 363
+DMY+KCG ++ A VDV F+ M+ + L++
Sbjct: 276 VDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVS 335
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W T++SG G +L LF +M+ +PD + + +L AC H+ + G S +
Sbjct: 336 WTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRS-VHAFI 394
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL-GSCR 475
+ Y ++ ++DL A+ G+L EA+ +++P ++ A W ++L G CR
Sbjct: 395 VTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS-AASWNSMLDGFCR 446
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 5/254 (1%)
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
NN D + PE + WN L+ G EVL+ + M+T+G V + +T
Sbjct: 81 NNLDCAHQILSYSHEPESII--WNTLLENKLKEGCPQEVLECYYHMVTQG-VLLDISTFH 137
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++ AC + + VH G+ N + N L+ +Y+KCG ++ +F M +
Sbjct: 138 FLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHR 197
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+I+WNT+IS + G AL LF EM +G +PD IT + ++ C + +E G
Sbjct: 198 DVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG-KRL 256
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM-PIEADAVIWANLLGSCRVYK 478
+D + + C+VD+ ++ G++ EA + R E D V+W L+
Sbjct: 257 HLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSN 316
Query: 479 NVELAELALERLTE 492
++ A +++ E
Sbjct: 317 KIDKARQLFDKMNE 330
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 48/322 (14%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H E + + +H +VT G+ ++ ++ A+ ++ A + F+++ ++ S
Sbjct: 380 HLEDFDLGRSVHAF---IVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAAS 436
Query: 68 WNAMFNG-------------------------------YAQNEFHRTVVVLFTQMKKLDA 96
WN+M +G Y +++ +F +M+ +
Sbjct: 437 WNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV 496
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ T +L SC K+ AL G ++ + KN + +GTALI++Y +E AY+
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYE 556
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGY 207
+F ++ E+NV VWT+M+ Y G + A L+ ER V +L G
Sbjct: 557 IFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGL 616
Query: 208 ID--VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNG 264
+D + + R ++ +P + + M+ G +EE + E MP E +V W+
Sbjct: 617 VDEGYKYFNKLRSFYNIIPT--IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSS 674
Query: 265 LIGGYANNGLFFEVLDAFKRML 286
L+ ++ AFK+++
Sbjct: 675 LMRACRSHHNVELAEQAFKQLI 696
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/529 (36%), Positives = 296/529 (55%), Gaps = 43/529 (8%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
MFD I D + V +N + Y ++ R + L M + +PN FT P V+K+C + A
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
+H + LK GF +FV AL+ Y++ ++ + + F EM RNVV W SMI G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 176 YISCGDIVSARCLFE------------------LAPER---------------------D 196
Y GD A LF LA + D
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVD 180
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+IL +V Y ++ AR+ F+ MP K V+SW +ML +G V+ + F+ MPE
Sbjct: 181 LILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPE 240
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN SWN +I Y G + E LD +K+M + G P++AT+V VLSAC R+G L K
Sbjct: 241 RNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPA-PDEATLVPVLSACGRIGDLTVGKM 299
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH+Y N + ++ + N+L+DMYAKCG ++ A+ +F M +++++WN II GLAMHGR
Sbjct: 300 VHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGR 359
Query: 377 GAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A++ F M +N PDGITF+ +L +C+H GL+E G YF+SM Y++ ++EHY
Sbjct: 360 ALDAITFFRSMVRNTS--PDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHY 417
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
CMVDLL R G L +AV +K MP++ D V+W LLG+CR++ NV++ + +++L ELE
Sbjct: 418 ACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEG 477
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ FV++SN+ + +W+D+ R++ M++ G +K G SSIE+N +
Sbjct: 478 ISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSI 526
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 182/386 (47%), Gaps = 51/386 (13%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ + A + +R+ FD++ +NVVSWN+M GYAQ R LF +M++
Sbjct: 81 FVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQ 140
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ + FT +L +C + L G +HCL+L +G ++ +G AL+++YS + A
Sbjct: 141 GFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMA 200
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
+ F M ++VV WTSM+ G + +ARC F+ PER+ + WNT++S Y+
Sbjct: 201 RRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYH 260
Query: 215 EARKLFDQMPKK---------------------------------------DVISWNTML 235
EA L+ QM D+ N++L
Sbjct: 261 EALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLL 320
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
YA G V+ RLF EM RNV SWN +IGG A +G + + F+ M+ P+
Sbjct: 321 DMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVRN--TSPDG 378
Query: 296 ATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
T V +LS+C+ G L+ F HVY + + C ++D+ + G +E AV
Sbjct: 379 ITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYAC----MVDLLGRRGHLEKAV 434
Query: 351 DVFNSMDTK-DLITWNTIISGLAMHG 375
+ M K D++ W ++ +HG
Sbjct: 435 CLIKEMPMKPDVVVWGALLGACRIHG 460
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 297/503 (59%), Gaps = 17/503 (3%)
Query: 56 MFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
+F+K D+ NV SWN++ A++ + F+ M+KL PN TFP +KSC +
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
L G + H L GF ++FV +AL+++YS + A +F E+ RN+V WTSMI
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 175 GYISCGDIVSARCLFE--LAPER----------DVILWNTIVSG--YIDVRNMIEARK-- 218
GY+ D A LF+ L E D I +++S + +++ E
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
L + + D+ NT++ YA G++ +R+F+ M ER+V SWN +I YA NG+ E
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
++ F RM+ +G + N T+ VL ACA G+ K +H G + NV VG ++ID
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG +E A F+ M K++ +W+ +++G MHG AL +F+EM AG P+ IT
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC+H GL+EEG +F++M+ ++ + P +EHYGCMVDLL RAG L EA D +K M
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
+ D V+W LLG+CR++KNV+L E++ +L EL+PKN +V+LSNIY D GRW+DV
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 586
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
R+++ M+++G K PG S +++
Sbjct: 587 RMRILMKNSGLVKPPGFSLVDIK 609
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 177/386 (45%), Gaps = 31/386 (8%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + + HQ Q + G E +++ ++ ++ ++ AR +FD+I+ +N+VSW +M
Sbjct: 168 LHSGRQAHQ---QALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 224
Query: 72 FNGYAQNEFHRTVVVLFTQM----KKLDAMPNCFTFPI----VLKSCVKINALREGEELH 123
GY QN+ ++LF + + PI VL +C +++ E +H
Sbjct: 225 ITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVH 284
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
++K GF ++ V L++ Y+ + + +VF M ER+V+ W S+I Y G
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARK-----LFDQMPK----KDVISWNTM 234
+ +F + I +N + + + + + DQ+ K +V ++
Sbjct: 345 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSI 404
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ Y G VE ++ F+ M E+NV SW+ ++ GY +G E L+ F M G V PN
Sbjct: 405 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG-VKPN 463
Query: 295 DATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
T V+VL+AC+ G L+ F H + G + C ++D+ + G ++ A
Sbjct: 464 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC----MVDLLGRAGYLKEA 519
Query: 350 VDVFNSMDTK-DLITWNTIISGLAMH 374
D+ M + D + W ++ MH
Sbjct: 520 FDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 189/424 (44%), Gaps = 64/424 (15%)
Query: 129 NGF--RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+GF R +I G L YS + + + +D+ NV W S+I GD V A
Sbjct: 80 SGFSKRRSICAGAVLRRRYSNNPNLTTLFNKY--VDKTNVFSWNSVIAELARSGDSVEAL 137
Query: 187 CLFE------LAPERDVILWN-TIVSGYIDVRNMIEARK---LFDQMPKKDVISWNTMLS 236
F L P R S +D+ + +A + +F P D+ + ++
Sbjct: 138 RAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEP--DLFVSSALVD 195
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE-------G 289
Y+ G++ + + LF+E+ RN+ SW +I GY N L FK L E G
Sbjct: 196 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDG 255
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
V + +V+VLSAC+R+ ++ VH + G++G++ V N L+D YAKCG + +
Sbjct: 256 EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVS 315
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP-DGITFIGILCACTH 408
VF+ M +D+I+WN+II+ A +G ++ +FH M GE+ + +T +L AC H
Sbjct: 316 RRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAH 375
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV-DFVKRMPIEADAVIW 467
G + RL + + D V +M +E++ +
Sbjct: 376 SG----------------------------------SQRLGKCIHDQVIKMGLESNVFVG 401
Query: 468 ANLLG-SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
+++ C+ K VE+A A +R+ E KN ++ + YG G K+ + M
Sbjct: 402 TSIIDMYCKCGK-VEMARKAFDRMRE---KNVKSWSAMVAGYGMHGHAKEALEVFYEMNM 457
Query: 527 TGFK 530
G K
Sbjct: 458 AGVK 461
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AHS K +H QV+ GLE + ++ II + ++ ARK FD++ ++NV
Sbjct: 374 AHSGSQRLGKCIHD---QVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 430
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW+AM GY + + + +F +M PN TF VL +C L EG +
Sbjct: 431 SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 490
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMING-----YISC 179
+ + +++L ++ A+ + M R + VVW +++ +
Sbjct: 491 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 550
Query: 180 GDIVSARCLFELAPE 194
G+I SAR LFEL P+
Sbjct: 551 GEI-SARKLFELDPK 564
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 326/575 (56%), Gaps = 47/575 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------T 61
+T+ ++QI +++ +G+ K+ +T RI+ A A ++ +AR +F +
Sbjct: 23 KTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGE 82
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
++ WNA+ ++ + R ++L M + + F+ +VLK+C ++ ++ G +
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H + K G +++F+ LI LY + + ++F M +R+ V + SMI+GY+ CG
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 182 IVSARCLFELAP----------------------------------ERDVILWNTIVSGY 207
IVSAR LF+L P E+D+I WN+++ GY
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 262
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + +A+ LFD MP++DV++W TM+ GYA G V K LF++MP R+V ++N ++
Sbjct: 263 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY-AEYNGY 326
GY N E L+ F M E + P+D T+V VL A A+LG L + +H+Y E Y
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY 382
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
G +G ALIDMY+KCG I++A+ VF ++ K + WN +I GLA+HG G A + +
Sbjct: 383 LGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 441
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 442 IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 501
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ A + ++ MP+E + VIW L +C +K E EL + L NP+++V+LSN
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 562 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 290/535 (54%), Gaps = 67/535 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
++ +T HL QI + GL+ + ++ + A L ++ Y+ +F + + +V W
Sbjct: 38 DKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWT 97
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+ +G+A H + + QM PN FTF +LK C + G+ LH +K
Sbjct: 98 AIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKL 153
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++++V T +++ Y GD+VSA+
Sbjct: 154 GFDSDLYVRTG-------------------------------LLDVYARGGDVVSAQ--- 179
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+LFD MP+K ++S ML+ YA +G+++ +
Sbjct: 180 ----------------------------QLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 211
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+ M ER+ WN +I GY NG+ E L F+RML + + PN+ T+++VLSAC +LG
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML-KAKAKPNEVTVLSVLSACGQLG 270
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL+ +WVH Y E NG Q NV VG AL+DMY+KCG +E+A VF+ +D KD++ WN++I
Sbjct: 271 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 330
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G AMHG AL LF M G P ITFIGIL AC H G V EG F M +Y I
Sbjct: 331 GYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE 390
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+IEHYGCMV+LL RAG + +A + VK M IE D V+W LLG+CR++ + L E +E
Sbjct: 391 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVEL 450
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L + N +++LSNIY +G W VAR++ M+D+G KK PGCSSIEVN V
Sbjct: 451 LVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKV 505
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 326/575 (56%), Gaps = 47/575 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------T 61
+T+ ++QI +++ +G+ K+ +T RI+ A A ++ +AR +F +
Sbjct: 16 KTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGE 75
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
++ WNA+ ++ + R ++L M + + F+ +VLK+C ++ ++ G +
Sbjct: 76 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 135
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H + K G +++F+ LI LY + + ++F M +R+ V + SMI+GY+ CG
Sbjct: 136 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 195
Query: 182 IVSARCLFELAP----------------------------------ERDVILWNTIVSGY 207
IVSAR LF+L P E+D+I WN+++ GY
Sbjct: 196 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 255
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + +A+ LFD MP++DV++W TM+ GYA G V K LF++MP R+V ++N ++
Sbjct: 256 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 315
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY-AEYNGY 326
GY N E L+ F M E + P+D T+V VL A A+LG L + +H+Y E Y
Sbjct: 316 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY 375
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
G +G ALIDMY+KCG I++A+ VF ++ K + WN +I GLA+HG G A + +
Sbjct: 376 LGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 434
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 435 IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 494
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ A + ++ MP+E + VIW L +C +K E EL + L NP+++V+LSN
Sbjct: 495 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 554
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 555 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 589
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 295/530 (55%), Gaps = 40/530 (7%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTY-----ARKMFDKITDQNVVSWNAM 71
HL Q ++ +G + YI ++ + A + Y + ++FD + NV WN M
Sbjct: 49 HLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCM 108
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+N ++L+ +M PN +T+P VLK+C + EG ++H ++K+G
Sbjct: 109 IKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGL 168
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ + ++ I +Y++ FG + E + R L +
Sbjct: 169 GGDGHILSSAIRMYAS----------FGRLVE--------------------ARRILDDK 198
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-WNTMLSGYANNGDVEECKRL 250
E D + WN ++ GY+ + AR+LF+ MP + +IS WN M+SG++ G VE +
Sbjct: 199 GGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREF 258
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+EM ER+ SW+ +I GY G F E L+ F +M E ++ P + +VLSACA LGA
Sbjct: 259 FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKE-KIRPRKFVLPSVLSACANLGA 317
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
LD +W+H YA+ N Q + +G +L+DMYAKCG I+ A +VF M K++ +WN +I G
Sbjct: 318 LDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 377
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LAMHGR A+ LF +M P+ ITF+G+L AC H GLV++GL+ F SM +Y + P
Sbjct: 378 LAMHGRAEDAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEP 434
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
QIEHYGC+VDLL RAG L EA V +P E +W LLG+CR + NVEL E + L
Sbjct: 435 QIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKIL 494
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELEP+N + +LSNIY GRW++V ++ M++ G K PG S I++
Sbjct: 495 LELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 544
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 6/188 (3%)
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI-----IENAVDVFNSMDTKDLITW 364
+L K H G+ + + +L+ YA E+++ VF+ + ++ W
Sbjct: 46 SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLW 105
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +I + A+ L++EM A P+ T+ +L AC+ G+V EG+ + +
Sbjct: 106 NCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHL-V 164
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ + + + A GRL EA + E DAV W ++ + VE A
Sbjct: 165 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 224
Query: 485 LALERLTE 492
E + +
Sbjct: 225 ELFEGMPD 232
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 291/505 (57%), Gaps = 9/505 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I++ A ++ AR FD +++ VSWN M Y +N LF + D +
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI-- 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V+ + E EL + ++ ++ Y+ + A ++F
Sbjct: 195 --SWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
R+V WT++++GY G + AR +F+ PER+ + WN +V+ YI R M EA++L
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+ MP ++V SWNTML+GYA G +EE K +F+ MP+++ SW ++ Y+ G E L
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F M G + N + VLS CA + AL+ +H GY VGNAL+ M
Sbjct: 369 QLFIEMGRCGE-WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG +E+A + F M+ +D+++WNT+I+G A HG G AL +F M+ PD IT
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC+H GLVE+G+SYF SM D+ + + EHY CM+DLL RAGRLAEA D +K MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
E D+ +W LLG+ R+++N EL A E++ ELEP+N +V+LSNIY G+W+D +
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
++V M + G KK+PG S IEV V
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKV 632
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 80/366 (21%)
Query: 143 ELYSTGKAIEA---------AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
E+ + KAI A A ++F M R+ + +M+ GY + G + A LF P
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
D +NT++ ++ +AR LFD+MP +D +++N M+S +AN+G V + F+
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
PE++ SWNG++ Y NG + E R N T V+S
Sbjct: 157 APEKDAVSWNGMLAAYVRNG-----------RVEEARGLFNSRTEWDVIS---------- 195
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
W NAL+ Y + G + A ++F+ M +D+++WN ++SG A
Sbjct: 196 --W-----------------NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 236
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG------------------ 415
G A LF +A + D T+ ++ G++EE
Sbjct: 237 RGDMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAM 292
Query: 416 -LSYFQSMAMD-----YSIVP--QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+Y Q MD ++++P + + M+ A+AG L EA MP + DAV W
Sbjct: 293 VAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSW 351
Query: 468 ANLLGS 473
A +L +
Sbjct: 352 AAMLAA 357
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 36/310 (11%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A++ YS + A +F + + + ++++ + AR LF+ P RD +
Sbjct: 74 AMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT 133
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+N ++S + + + AR FD P+KD +SWN ML+ Y NG VEE + LF E +V
Sbjct: 134 YNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV 193
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-------- 311
SWN L+ GY G E + F RM V N ++S AR G +
Sbjct: 194 ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN-----IMVSGYARRGDMVEARRLFD 248
Query: 312 -----DFSKWVHVYAEY--NGY------------QGNVCVGNALIDMYAKCGIIENAVDV 352
D W V + Y NG + N NA++ Y + +++ A ++
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
FN M +++ +WNT+++G A G A ++F M D +++ +L A + G
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCS 364
Query: 413 EEGLSYFQSM 422
EE L F M
Sbjct: 365 EETLQLFIEM 374
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +++ +G ++ ++ + M AR F+++ +++VVSWN M GYA++
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVG 138
F + + +F M+ P+ T VL +C + +G + + G A
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 523
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L + A+ + +M E + +W S I+ G +A +FEL
Sbjct: 524 TCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR-SAAEKIFELE 582
Query: 193 PERD---VILWNTIVSG--YIDVRNM 213
PE V+L N S + D R M
Sbjct: 583 PENAGMYVLLSNIYASSGKWRDARKM 608
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/549 (37%), Positives = 302/549 (55%), Gaps = 49/549 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN-EFHRTVVVLF-TQMKKLDAM 97
+++A A+L + AR +F+ I D + S+NA+ A++ H + F M D +
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFV 148
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
N ++F L +C LR GE++H LV ++ ++ +GTAL+++Y+ + A +V
Sbjct: 149 LNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRV 208
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLF-----------------------ELAPE 194
F M ERNVV W S+I Y G + A LF LA E
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAE 268
Query: 195 R-----------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
R D++L N +V Y EAR +FD MP + V+S ++L+G
Sbjct: 269 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA + +VE+ + +F +M E+NV +WN LI YA NG E + F + L ++P T
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYT 387
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVD 351
VL+AC + L + HV+ G+ + +V VGN+L+DMY K G I++
Sbjct: 388 YGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF M +D ++WN +I G A +GR AL LF M + E PD +T IG+L AC H GL
Sbjct: 448 VFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGL 507
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V+EG +F M D+ I P +HY CMVDLL RAG L EA + +K MP E D+V+WA+LL
Sbjct: 508 VDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLL 567
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
G+CR++KNVEL E RL EL+P+N +V+LSN+Y ++G+W DV R++ +M+D G K
Sbjct: 568 GACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSK 627
Query: 532 LPGCSSIEV 540
PGCS IE+
Sbjct: 628 QPGCSWIEI 636
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 184/403 (45%), Gaps = 49/403 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V S +I ++ A+ ++ AR++FD + ++NVVSWN++ Y QN
Sbjct: 172 QVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNG 231
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNGFRANIFVG 138
+VLF +M P+ T V+ +C + A REG ++H +V ++ R ++ +
Sbjct: 232 PVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLN 291
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ A +F M R+VV TS++ GY ++ A+ +F E++VI
Sbjct: 292 NALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVI 351
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQM----------------------------------- 223
WN +++ Y EA +LF Q+
Sbjct: 352 AWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHV 411
Query: 224 ----------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
P+ DV N+++ Y G +++ ++FE M R+ SWN +I GYA NG
Sbjct: 412 LKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNG 471
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCV 332
+ L F+RML P+ T++ VLSAC G +D + H E +G +
Sbjct: 472 RAKDALHLFERMLCSNE-NPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDH 530
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
++D+ + G ++ A ++ M T+ D + W +++ +H
Sbjct: 531 YTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 573
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 164/341 (48%), Gaps = 7/341 (2%)
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
C+ + + L NT+VS Y + + EAR++FD +P ++ S+N +LS YA G +E
Sbjct: 42 CVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDE 101
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFF--EVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ LFE +P+ + S+N ++ A +G + L M + V N + + LSA
Sbjct: 102 ARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVL-NAYSFASALSA 160
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA L + VH + + +V +G AL+DMYAKC +A VF++M +++++W
Sbjct: 161 CAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSW 220
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N++I+ +G AL LF EM G PD +T ++ AC + EG M
Sbjct: 221 NSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVK 280
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ + +VD+ A+ GR EA MP + V ++L NVE A+
Sbjct: 281 RDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRS-VVSETSILAGYAKSANVEDAQ 339
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
+ ++ E KN + +L Y G ++ R+ V ++
Sbjct: 340 VVFSQMVE---KNVIAWNVLIAAYAQNGEEEEAIRLFVQLK 377
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 172/423 (40%), Gaps = 80/423 (18%)
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H VLK+ F+ L+ Y+ + A +VF + RN + ++++ Y G
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 183 VSARCLFELAPERDVILWNTIVSGYI---------------------------------- 208
AR LFE P+ D +N +V+
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS 159
Query: 209 ------DVRNMIEARKLFDQMPKKDVISWNTMLSG-YANNGDVEECKRLFEEMPERNVFS 261
D+R + L + P D + T L YA + +R+F+ MPERNV S
Sbjct: 160 ACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVS 219
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY- 320
WN LI Y NG E L F M+ G FP++ T+ +V+SACA L A + VH +
Sbjct: 220 WNSLITCYEQNGPVGEALVLFVEMMATG-FFPDEVTLSSVMSACAGLAAEREGRQVHAHM 278
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGI-------------------------------IENA 349
+ + + ++ + NAL+DMYAKCG +E+A
Sbjct: 279 VKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDA 338
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
VF+ M K++I WN +I+ A +G A+ LF ++K P T+ +L AC ++
Sbjct: 339 QVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNI 398
Query: 410 GLVEEGLSYF-----QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
+++ G + D+ + +VD+ + G + + +RM D
Sbjct: 399 AVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DN 457
Query: 465 VIW 467
V W
Sbjct: 458 VSW 460
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 291/505 (57%), Gaps = 9/505 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I++ A ++ AR FD +++ VSWN M Y +N LF + D +
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI-- 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V+ + E EL + ++ ++ Y+ + A ++F
Sbjct: 195 --SWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
R+V WT++++GY G + AR +F+ PER+ + WN +V+ YI R M EA++L
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+ MP ++V SWNTML+GYA G +EE K +F+ MP+++ SW ++ Y+ G E L
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 368
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F M G + N + VLS CA + AL+ +H GY VGNAL+ M
Sbjct: 369 QLFIEMGRCGE-WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG +E+A + F M+ +D+++WNT+I+G A HG G AL +F M+ PD IT
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC+H GLVE+G+SYF SM D+ + + EHY CM+DLL RAGRLAEA D +K MP
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
E D+ +W LLG+ R+++N EL A E++ ELEP+N +V+LSNIY G+W+D +
Sbjct: 548 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 607
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
++V M + G KK+PG S IEV V
Sbjct: 608 MRVMMEERGVKKVPGFSWIEVQNKV 632
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 80/366 (21%)
Query: 143 ELYSTGKAIEA---------AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
E+ + KAI A A ++F M R+ + +M+ GY + G + A LF P
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
D +NT++ ++ +AR LFD+MP +D +++N M+S +AN+G V + F+
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
PE++ SWNG++ Y NG + E R N T V+S
Sbjct: 157 APEKDAVSWNGMLAAYVRNG-----------RVEEARGLFNSRTEWDVIS---------- 195
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
W NAL+ Y + G + A ++F+ M +D+++WN ++SG A
Sbjct: 196 --W-----------------NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 236
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG------------------ 415
G A LF +A + D T+ ++ G++EE
Sbjct: 237 RGDMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAM 292
Query: 416 -LSYFQSMAMD-----YSIVP--QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+Y Q MD ++++P + + M+ A+AG L EA MP + DAV W
Sbjct: 293 VAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSW 351
Query: 468 ANLLGS 473
A +L +
Sbjct: 352 AAMLAA 357
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 36/311 (11%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A++ YS + A +F + + + ++++ + AR LF+ P RD +
Sbjct: 74 AMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVT 133
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+N ++S + + + AR FD P+KD +SWN ML+ Y NG VEE + LF E +V
Sbjct: 134 YNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV 193
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-------- 311
SWN L+ GY G E + F RM V N ++S AR G +
Sbjct: 194 ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN-----IMVSGYARRGDMVEARRLFD 248
Query: 312 -----DFSKWVHVYAEY--NGY------------QGNVCVGNALIDMYAKCGIIENAVDV 352
D W V + Y NG + N NA++ Y + +++ A ++
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
FN M +++ +WNT+++G A G A ++F M D +++ +L A + G
Sbjct: 309 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCS 364
Query: 413 EEGLSYFQSMA 423
EE L F M
Sbjct: 365 EETLQLFIEMG 375
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +++ +G ++ ++ + M AR F+++ +++VVSWN M GYA++
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVG 138
F + + +F M+ P+ T VL +C + +G + + G A
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 523
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L + A+ + +M E + +W S I+ G +A +FEL
Sbjct: 524 TCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR-SAAEKIFELE 582
Query: 193 PERD---VILWNTIVSG--YIDVRNM 213
PE V+L N S + D R M
Sbjct: 583 PENAGMYVLLSNIYASSGKWRDARKM 608
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/533 (36%), Positives = 290/533 (54%), Gaps = 34/533 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAM 71
+ HL Q+ + +G + Y++ ++ A + +A K+F+ + + NV +N +
Sbjct: 42 SLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNII 101
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
G QN + + +M A PN FT+P + K+C A EG ++H V+K G
Sbjct: 102 IKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGL 161
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++ + +A I++Y + +E A ++ GE
Sbjct: 162 SGDVHIRSAGIQMYGSFGEVEGARRMLGE------------------------------- 190
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
DVI +N ++ GY+ + A++LF M K+V SWN M+SG A G +EE + LF
Sbjct: 191 DGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELF 250
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EM E+N SW+ +I GY G + E L+ F M E + P + +VL+ACA LGAL
Sbjct: 251 NEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQRE-EIRPRKFVLSSVLAACANLGAL 309
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D +W+H Y N + +G AL+DMYAKCG ++ A DVF M+ K++ TWN +I GL
Sbjct: 310 DQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGL 369
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
MHGR A+ LF +M+ P+GIT +G+L AC H G+V+EGL F SM Y I P
Sbjct: 370 GMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPG 429
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGC+VDLL RAG L EA + + MP+E A +W LLG+CR + +VEL E + L
Sbjct: 430 MEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILL 489
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP+N + +LSNIY GRW DVA ++ M++ G K G S I+ + VV
Sbjct: 490 ELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVV 542
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 322/611 (52%), Gaps = 78/611 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV----- 65
+L +++ + +++ + + +I R+I + + YARK+FD+++++NV
Sbjct: 36 KLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNS 95
Query: 66 --------------------------VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
SWN+M G+AQ++ + F +M + D + N
Sbjct: 96 IISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLN 155
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++F L +C ++ L+ G ++H L+ K+ + ++F+G+ LI+ YS + A +VF
Sbjct: 156 DYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFD 215
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPE------------------------- 194
M+E+NVV W +I Y G + A F E
Sbjct: 216 GMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKE 275
Query: 195 ---------------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
D+IL N +V Y + EAR +FD+MP ++ +S TM+SGYA
Sbjct: 276 GVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYA 335
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
+ V+ + +F + ++++ SWN LI GY NG E L F RML V P T
Sbjct: 336 KSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLF-RMLKRESVCPTHYTFG 394
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVF 353
+L+A A L L+ + H + +G+ + ++ VGN+LIDMY KCG +E + VF
Sbjct: 395 NLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVF 454
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
+M KD ++WNT+I G A +G G AL LF +M +GE PD +T IG LCAC+H GLVE
Sbjct: 455 ENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVE 514
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EG YF SM ++ ++P +HY CMVDLL RAG L EA D ++ MP + DAV+W++LL +
Sbjct: 515 EGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSA 574
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
C+V++N+ L + E++ E++P + +V+L+N+Y +LGRW D ++ MR G K P
Sbjct: 575 CKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQP 634
Query: 534 GCSSIEVNEVV 544
GCS I++ V
Sbjct: 635 GCSWIDIQSNV 645
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 198/447 (44%), Gaps = 82/447 (18%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +L CVK+ + R+ +H +++ F +F+ LI++Y ++ A KVF M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
ERNV + S+I+ + G + + LF L PE+D WN++++G+ EA F +
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 223 MPKKDVI----SWNTMLSG-----------------------------------YANNGD 243
M + D + S+ + LS Y+ G
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V +R+F+ M E+NV SWN LI Y NG E L+AF RM TE P++ T+ +V+S
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRM-TELGFKPDEVTLASVVS 265
Query: 304 ACARLGALDFSKWVHVYA---EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM---- 356
ACA L A F + V ++A + + ++ ++ +GNAL+DMYAKCG + A VF+ M
Sbjct: 266 ACATLAA--FKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323
Query: 357 ---------------------------DTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
KD+++WN +I+G +G AL LF +K
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYF-----QSMAMDYSIVPQIEHYGCMVDLLAR 444
P TF +L A ++ +E G P I ++D+ +
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLL 471
G + E + + M +E D V W ++
Sbjct: 444 CGSVEEGLRVFENM-VEKDHVSWNTMI 469
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
F + + +L C +L + ++ VH + V + N LID+Y KCG ++ A
Sbjct: 21 FTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARK 80
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ M +++ ++N+IIS L G + LF M D ++ ++
Sbjct: 81 VFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPE----KDQCSWNSMIAGFAQHDR 136
Query: 412 VEEGLSYFQSMAMD 425
EE L +F M D
Sbjct: 137 FEEALDWFVRMHRD 150
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 288/483 (59%), Gaps = 9/483 (1%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVS+ ++ GY ++ + LF QM + N ++ ++L + + E L
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGGLLDAGRVNEARRL- 165
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
++ TA++ Y I A +F EM +RNVV WT+MI+GY G++
Sbjct: 166 ---FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVN 222
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
AR LFE+ PER+ + W ++ GYI ++ +A +LF+ MP+ V + N M+ G+ G
Sbjct: 223 LARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+ K +FE+M ER+ +W+ +I Y N E L F+ ML G V PN +++++L+
Sbjct: 283 VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRG-VRPNYPSVISILT 341
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
CA L LD+ + VH + +V +ALI MY KCG ++ A VF++ + KD++
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM 401
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+G A HG G AL +FH+M+ AG PDGIT+IG L AC++ G V+EG F SM
Sbjct: 402 WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
++ SI P EHY CMVDLL R+G + EA D +K MP+E DAVIW L+G+CR+++N E+A
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E+A ++L ELEP N +V+LS+IY +GRW+D ++++ + K PGCS IE ++
Sbjct: 522 EVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 544 VML 546
V L
Sbjct: 582 VHL 584
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 171/390 (43%), Gaps = 62/390 (15%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I A+ + AR F+ + + S+NA+ GY +N + LF +M D
Sbjct: 24 IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD----- 78
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNG--------FRANIFVGTALIELYSTGKAIE 152
NAL G L L + F ++ T+L+ Y +
Sbjct: 79 ---------LASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA 129
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A ++F +M ERN V +T ++ G + G + AR LF+ P+RDV+ W ++SGY
Sbjct: 130 DAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGR 189
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ EAR LFD+MPK++V+SW M+SGYA NG+V ++LFE MPERN SW ++ GY
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G + + F M ++AC
Sbjct: 250 GHVEDAAELFNAMPEHP------------VAAC--------------------------- 270
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NA++ + + G+++ A VF M +D TW+ +I + ALS F EM G
Sbjct: 271 -NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGV 329
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSM 422
P+ + I IL C + +++ G +M
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHAAM 359
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 21/267 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITAC-------AQLKQMTYARKMFDKITDQNVVSWNAMFN 73
IQ V E + + + AC Q + A+ +F+K+ +++ +W+AM
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIK 306
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
Y QNEF + F +M PN + +L C + L G E+H +L+ F
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--- 190
++F +ALI +Y ++ A +VF + +++V+W SMI GY G A +F
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426
Query: 191 ---LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNG 242
++P D I + ++ + E R++F+ M I ++ M+ +G
Sbjct: 427 LAGMSP--DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 243 DVEECKRLFEEMP-ERNVFSWNGLIGG 268
VEE L + MP E + W L+G
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT + + A+++F +++V WN+M GYAQ+ + +F M+ P+
Sbjct: 374 LITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPD 433
Query: 100 CFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
T+ L +C ++EG E+ + + + + R + +++L +E A+ +
Sbjct: 434 GITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLI 493
Query: 159 GEMD-ERNVVVWTSMI-------NGYISCGDIVSARCLFELAP 193
M E + V+W +++ N I+ V+A+ L EL P
Sbjct: 494 KNMPVEPDAVIWGALMGACRMHRNAEIA---EVAAKKLLELEP 533
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR----GAGALSLFHEMKN 389
NAL+ Y + + + A+ +F M ++DL ++N +ISGL++ + A AL+ +
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALA------S 105
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH--YGCMVDLLARAGR 447
P ++F +L GL+ + + FQ M P+ H Y ++ L AGR
Sbjct: 106 IPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGR 158
Query: 448 LAEAVDFVKRMPIEADAVIWANLL-GSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ EA MP + D V W +L G C+ + E L E+ +N ++ + +
Sbjct: 159 VNEARRLFDEMP-DRDVVAWTAMLSGYCQAGRITEARAL----FDEMPKRNVVSWTAMIS 213
Query: 507 IYGDLG 512
Y G
Sbjct: 214 GYAQNG 219
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/480 (40%), Positives = 291/480 (60%), Gaps = 4/480 (0%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
++ WN + +A R+++ F++M++ P+ +TFP VLK+C R G +
Sbjct: 80 RHAFPWNTLVRLHAAASPRRSLLY-FSRMRRAAVAPDAYTFPAVLKACGCAPGCRVGLVV 138
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H ++ G A++F ALI Y + KVF + R++V W SM+ GY+ CG++
Sbjct: 139 HGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVF-DHGVRDLVSWNSMVAGYVGCGEV 197
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANN 241
A+ LF+ +RD W T++ GY ++ ++ AR+LFDQMP +D++ WN+M+ GYA +
Sbjct: 198 DLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARH 257
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G ++E + LFEEMPERNV SW+ +I GY G E L+ F+RML G + P+ V
Sbjct: 258 GRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCG-IKPDRVAAVGA 316
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
++ACA+LGAL+ +W+H Y E +V V ALIDMY KCG ++ A +F SM K +
Sbjct: 317 VAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSV 376
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+TWN +I GL HG G A+ LF++M+ D ++ + +L +CTH GLV EGL F
Sbjct: 377 VTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYR 436
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M D + P++EHYG ++DLL RAGR+ +A + ++ MP+E +W +LL SCR ++ VE
Sbjct: 437 MEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVE 496
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAEL++ERL L + +V+LSNIY D G W DV RI+ M G KK G S IEV+
Sbjct: 497 LAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVD 556
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 328/575 (57%), Gaps = 47/575 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------T 61
+T+ +++I ++ +G+ K+ +T RI+ A A ++ +AR +F +
Sbjct: 16 KTSYDVNKIHGGLIKTGIIKNSNLTTRIVLAFAASRRPYLAEFARCVFHEYHVCSFSPGE 75
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
++ WNA+ ++ + R ++LF M + + F+ +VLK+C ++ ++ G +
Sbjct: 76 MEDPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 135
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H + K G +++F+ LI LY + A ++F M +R+ V + SMINGY+ CG
Sbjct: 136 IHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGL 195
Query: 182 IVSARCLFELAP----------------------------------ERDVILWNTIVSGY 207
I SAR LF+L P E+D+I WN+++ GY
Sbjct: 196 IESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSMIDGY 255
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + +A+ LFD MP++DV++ TM+ GYA G V + K LF++MP R+V ++N ++
Sbjct: 256 VKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMA 315
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY-AEYNGY 326
GY N E L+ F M E + P++ T+V +LSA A+LG L + +H+Y E Y
Sbjct: 316 GYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQFY 375
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
G +G ALIDMY+KCG I++A+ VF ++ K + WN +I GLA+HG G A ++ +
Sbjct: 376 LGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHGLGESAFNMLLQ 434
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
++ +PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 435 IERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 494
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ A + ++ MPIE + VIW L +C +K E EL + L NP+++V+LSN
Sbjct: 495 SIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 554
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 555 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 589
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 314/580 (54%), Gaps = 49/580 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGL--EKSDYITPRIITACAQLKQ----MTYARKMFDKITDQ 63
Q + + L+Q+ ++ G SD + + + CA K + +AR++FD I
Sbjct: 19 RQCRSIQRLNQLHAHLLVHGSLSAASDLL---LASYCALAKAGHGVLCHARRLFDGIPGP 75
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ V +N + Y + R + L M + +PN FT P V+K+C A +H
Sbjct: 76 DRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALAVH 135
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD-- 181
+ L+ G +FVG AL+ Y++ ++ + + F EM +RNVV W SMI GY GD
Sbjct: 136 GVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTR 195
Query: 182 --------------------IVS----------------ARCLFELAPER-DVILWNTIV 204
+VS C ++ R D+IL + +V
Sbjct: 196 EVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALV 255
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
Y ++ AR+ F+ MP K V+SW +ML +G V + F+ MPERN+ SWN
Sbjct: 256 DMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNA 315
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I Y G E LD + +M ++G + P++ T+V VLSA R+G L K VH+Y N
Sbjct: 316 MISCYVQRGQCHEALDLYNQMQSQG-LAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDN 374
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
Y +V + N+L+DMYAKCG ++ A+ +F+ M +++++WN II GLAMHGR ++ F
Sbjct: 375 IYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFF 434
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
M PDGITF+ +L AC+H GL+E G YF+SM Y++ ++EHY CMVDLL R
Sbjct: 435 RSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGR 494
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
G L +AV +K MP++ D V+W LLG+CR++ NV++ +++L ELE + FV++
Sbjct: 495 RGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLI 554
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
SN+ + +W+D+ R++ M++ G +K G SSIE+N +
Sbjct: 555 SNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSI 594
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/552 (35%), Positives = 306/552 (55%), Gaps = 71/552 (12%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
++D A T + L ++ VV + +S Y+ +I+ C +++T+A ++F ++
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQV 72
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-------NCFTFPIVLKSCVKI 113
D N+ NAM YAQN HR V ++ +M + P + FT+P +LK+C
Sbjct: 73 RDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACG-- 130
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
GTA +EL GK +
Sbjct: 131 ------------------------GTAALEL---GKQVHT-------------------- 143
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
+V + C + I+ N+++ Y ++ A K+FD+M ++DV+SWN
Sbjct: 144 -------HVVRSGC------DSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++S +A G + + LF MP++ + +W ++ GY G + +DAF+ M TEG P
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEG-FEP 249
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+D +IV VL ACA+LG L+ +W++ Y + +G + + NAL++MYAKCG I+ A+ +F
Sbjct: 250 DDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLF 309
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLV 412
+ M KD+I+W+T+I GLA HGR A+ LF EM+ G++ P+ ITF+G+L AC++ GLV
Sbjct: 310 DGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLV 369
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EGLS+F M Y + P +EHYGC+VDLL R+G++ A+D V+ MP+ ADA +W +LL
Sbjct: 370 DEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLS 429
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CR + +V+ A LA ERL ELEP + N VML+N+Y RW DVA + A+R +K
Sbjct: 430 ACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKT 489
Query: 533 PGCSSIEVNEVV 544
PGCS IEV VV
Sbjct: 490 PGCSLIEVGNVV 501
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 309/535 (57%), Gaps = 36/535 (6%)
Query: 13 ETTKHLHQIQTQV-VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+T K L I ++ + S + S+++ +++ ++ YA K+FD+IT N W ++
Sbjct: 13 KTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSL 72
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY +N + LF QM++ FT VLK+ ++ + G+ ++ GF
Sbjct: 73 IHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY------GF 126
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
F EM E+++V W MI+GY + + AR F+
Sbjct: 127 -------------------------AFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDR 161
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR-L 250
PER+V+ W +++ GY+ +M EA+ LFD MP KD+ SWN M+SGY + GD R L
Sbjct: 162 MPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCL 221
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F++MP +N+ +W+ +IGGYA NG + L+ F+R E + P++ I+ ++SAC++LG
Sbjct: 222 FDQMPMKNLVTWSTMIGGYARNGQPLKALELFER-FKEQDIKPDETFILGIISACSQLGI 280
Query: 311 LDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+D ++ +H Y ++ V +LIDMYAKCG IE A+ +F KDL+ ++T+I+
Sbjct: 281 IDAAESIIHNYVG-PSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIA 339
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
LA HG G A+ LF +M+ A PD +TF+G+L AC H GLV+EG YF+ M ++ I
Sbjct: 340 ALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQ 399
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +HY C+VDLL R G L EA + ++ MPI +V+W LL +CRV+ NV+LAE+A
Sbjct: 400 PSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAE 459
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++EP N N+++LSNIY GRW VA+++ +R+ +K G S IE++ VV
Sbjct: 460 LFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVV 514
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 278/455 (61%), Gaps = 2/455 (0%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + D +P+ +F ++L+SC + GE HC ++K GF ++ + T L++ Y+
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ A +VF M R+VV +MI+ G + AR LF+ ER+ WN++++ Y +
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKL 120
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM-PERNVFSWNGLIGGY 269
++ AR +FD P KDV+SWN ++ GY + + + LF M RN +WN +I Y
Sbjct: 121 GDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAY 180
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
G F + F++M +E V P + T+V++LSACA LGALD +W+H Y + +
Sbjct: 181 VQCGEFGTAISMFQQMQSE-NVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V +GNALIDMY KCG +E A+DVF+ + K++ WN+II GL M+GRG A++ F M+
Sbjct: 240 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK 299
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G PDG+TF+GIL C+H GL+ G YF M Y + P +EHYGCMVDLL RAG L
Sbjct: 300 EGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLK 359
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA++ ++ MP++ ++++ +LL +C+++K+ +L E ++L EL+P + N+V LSN+Y
Sbjct: 360 EALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYA 419
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L RW DV + M G K PGCSSIEVN +V
Sbjct: 420 SLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIV 454
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 69/351 (19%)
Query: 29 GLEKSDYITPR-IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVL 87
G+ + D + +I+A ++ + AR +FD +T++N SWN+M Y + + ++
Sbjct: 70 GMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLM 129
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
F D P +K V NA+ +G Y
Sbjct: 130 F------DCNP--------VKDVVSWNAIIDG-------------------------YCK 150
Query: 148 GKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-TIVS 205
K + AA ++F M RN V W +MI+ Y+ CG+ +A +F+ +V T+VS
Sbjct: 151 SKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVS 210
Query: 206 --------GYID----VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
G +D + I ++L K DV+ N ++ Y G +E +F
Sbjct: 211 LLSACAHLGALDMGEWIHGYIRTKRL-----KIDVVLGNALIDMYCKCGALEAAIDVFHG 265
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD- 312
+ +N+F WN +I G NG E + AF M EG + P+ T V +LS C+ G L
Sbjct: 266 LSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEG-IKPDGVTFVGILSGCSHSGLLSA 324
Query: 313 ----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
FS+ + VY G + C ++D+ + G ++ A+++ +M K
Sbjct: 325 GQRYFSEMLGVYGLEPGVEHYGC----MVDLLGRAGYLKEALELIRAMPMK 371
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 37/272 (13%)
Query: 40 IITACAQLKQMTYARKMFDKI-TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
II + KQ+ A+++F + + +N V+WN M + Y Q T + +F QM+ + P
Sbjct: 144 IIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKP 203
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
T +L +C + AL GE +H + + ++ +G ALI++Y A+EAA VF
Sbjct: 204 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVF 263
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
+ +N+ W S+I G G A F + E++ I
Sbjct: 264 HGLSRKNIFCWNSIIVGLGMNGRGEEAIAAF-IVMEKEGI-------------------- 302
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM-----PERNVFSWNGLIGGYANNG 273
K D +++ +LSG +++G + +R F EM E V + ++ G
Sbjct: 303 ------KPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAG 356
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E L+ + M + PN + ++L AC
Sbjct: 357 YLKEALELIRAMPMK----PNSMVLGSLLRAC 384
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 303/542 (55%), Gaps = 39/542 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQ---LKQMTYARKMFDKI-TDQNV 65
+ + K L Q+ T ++ + L K Y R++ + A L + YA+K+FD + +N
Sbjct: 39 QNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIPRNS 98
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ M YA R +++M + PN FTF V +C K N + EG++ H
Sbjct: 99 FMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAH 158
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI- 182
++K F E V W S+++ Y G++
Sbjct: 159 AQMIKFPF-------------------------------EFGVHSWNSLLDFYGKVGEVG 187
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+ R +F+ DV+ WN +++GY+ ++ EAR+LFD+MP++DV+SW ML GYA+ G
Sbjct: 188 IVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAG 247
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+ E LF+EMP+RN+ SW+ LI GY G + + L+ FK M +V ++ + T+L
Sbjct: 248 FLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQV-AKVKMDEVIVTTLL 306
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SACARLGALD +W+H+Y + +G + + + ALIDMY+KCG I+ A VF K +
Sbjct: 307 SACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVF 366
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
W+++I GLAMH G A+ LF +M G P IT+I IL ACTH GLV+ GL F M
Sbjct: 367 VWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRM 426
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ P+++HYGC+VDLL RAG L +A V+ MP++AD IW LL +C++++NVEL
Sbjct: 427 VENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVEL 486
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E L ++EP+N N+V+ SN+Y + RW +++ M+ G +K PGCSSIE+N
Sbjct: 487 GEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNG 546
Query: 543 VV 544
V
Sbjct: 547 AV 548
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/505 (38%), Positives = 291/505 (57%), Gaps = 9/505 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I++ A ++ AR FD +++ VSWN M Y +N LF + D +
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI-- 69
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V+ + E EL + ++ ++ Y+ + A ++F
Sbjct: 70 --SWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFD 123
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
R+V WT++++GY G + AR +F+ PER+ + WN +V+ YI R M EA++L
Sbjct: 124 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 183
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+ MP ++V SWNTML+GYA G +EE K +F+ MP+++ SW ++ Y+ G E L
Sbjct: 184 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 243
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F M G + N + VLS CA + AL+ +H GY VGNAL+ M
Sbjct: 244 QLFIEMGRCGE-WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 302
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG +E+A + F M+ +D+++WNT+I+G A HG G AL +F M+ PD IT
Sbjct: 303 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 362
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC+H GLVE+G+SYF SM D+ + + EHY CM+DLL RAGRLAEA D +K MP
Sbjct: 363 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 422
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
E D+ +W LLG+ R+++N EL A E++ ELEP+N +V+LSNIY G+W+D +
Sbjct: 423 FEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARK 482
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
++V M + G KK+PG S IEV V
Sbjct: 483 MRVMMEERGVKKVPGFSWIEVQNKV 507
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 169/374 (45%), Gaps = 52/374 (13%)
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M R+ V + MI+ + + G + AR F+LAPE+D + WN +++ Y+ + EAR LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ + DVISWN ++SGY G + E + LF+ MP R+V SWN ++ GYA G E
Sbjct: 61 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEA-- 118
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-------------WVHVYAEYNGYQ 327
R L + + T V+S A+ G L+ ++ W + A Y +
Sbjct: 119 ---RRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR 175
Query: 328 --------------GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
NV N ++ YA+ G++E A VF++M KD ++W +++ +
Sbjct: 176 MMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ 235
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
G L LF EM GE + F +L C + +E G M + ++
Sbjct: 236 GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECG------MQLHGRLIRAGY 289
Query: 434 HYGCMVD--LLA---RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
GC V LLA + G + +A + + M E D V W ++ Y + ALE
Sbjct: 290 GVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERDVVSWNTMIAG---YARHGFGKEALE 345
Query: 489 -----RLTELEPKN 497
R T +P +
Sbjct: 346 IFDMMRTTSTKPDD 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +++ +G ++ ++ + M AR F+++ +++VVSWN M GYA++
Sbjct: 279 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 338
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVG 138
F + + +F M+ P+ T VL +C + +G + + G A
Sbjct: 339 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY 398
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +I+L + A+ + +M E + +W S I+ G +A +FEL
Sbjct: 399 TCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGR-SAAEKIFELE 457
Query: 193 PERD---VILWNTIVSG--YIDVRNM 213
PE V+L N S + D R M
Sbjct: 458 PENAGMYVLLSNIYASSGKWRDARKM 483
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 287/483 (59%), Gaps = 9/483 (1%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVS+ ++ GY ++ + LF QM + N ++ ++L + + E L
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGGLLDAGRVNEARRL- 165
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
++ TA++ Y I A +F EM +RNVV WT+MI+GY G++
Sbjct: 166 ---FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVN 222
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
AR LFE+ PER+ + W ++ GYI ++ +A +LF+ MP+ V + N M+ G+ G
Sbjct: 223 LARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+ K +FE+M ER+ +W+ +I Y N E L F+ ML G V PN +++++L+
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRG-VRPNYPSVISILT 341
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
CA L LD+ + VH + +V +ALI MY KCG ++ A VF++ + KD++
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM 401
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+G A HG G AL +FH+M+ AG PDGIT+IG L AC++ G V+EG F SM
Sbjct: 402 WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
++ SI P EHY CMVDLL R+G + EA D +K MP+E DAVIW L+G+CR+++N E+A
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E A ++L ELEP N +V+LS+IY +GRW+D ++++ + K PGCS IE ++
Sbjct: 522 EFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 544 VML 546
V L
Sbjct: 582 VHL 584
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 171/390 (43%), Gaps = 62/390 (15%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I A+ + AR F+ + + S+NA+ GY +N + LF +M D
Sbjct: 24 IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD----- 78
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNG--------FRANIFVGTALIELYSTGKAIE 152
NAL G L L + F ++ T+L+ Y +
Sbjct: 79 ---------LASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA 129
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A ++F +M ERN V +T ++ G + G + AR LF+ P+RDV+ W ++SGY
Sbjct: 130 DAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGR 189
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ EAR LFD+MPK++V+SW M+SGYA NG+V ++LFE MPERN SW ++ GY
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G + + F M ++AC
Sbjct: 250 GHVEDAAELFNAMPEHP------------VAAC--------------------------- 270
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NA++ + + G+++ A VF M +D TW+ +I + ALS F EM G
Sbjct: 271 -NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGV 329
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSM 422
P+ + I IL C + +++ G +M
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHAAM 359
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 21/267 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITAC-------AQLKQMTYARKMFDKITDQNVVSWNAMFN 73
IQ V E + + + AC Q + A+ +F+K+ +++ +W+AM
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIK 306
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
Y QNEF + F +M PN + +L C + L G E+H +L+ F
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--- 190
++F +ALI +Y ++ A +VF + +++V+W SMI GY G A +F
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426
Query: 191 ---LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNG 242
++P D I + ++ + E R++F+ M I ++ M+ +G
Sbjct: 427 LAGMSP--DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 243 DVEECKRLFEEMP-ERNVFSWNGLIGG 268
VEE L + MP E + W L+G
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR----GAGALSLFHEMKN 389
NAL+ Y + + + A+ +F M ++DL ++N +ISGL++ + A AL+ +
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALA------S 105
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH--YGCMVDLLARAGR 447
P ++F +L GL+ + + FQ M P+ H Y ++ L AGR
Sbjct: 106 IPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGR 158
Query: 448 LAEAVDFVKRMPIEADAVIWANLL-GSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ EA MP + D V W +L G C+ + E L E+ +N ++ + +
Sbjct: 159 VNEARRLFDEMP-DRDVVAWTAMLSGYCQAGRITEARAL----FDEMPKRNVVSWTAMIS 213
Query: 507 IYGDLG 512
Y G
Sbjct: 214 GYAQNG 219
>gi|125573086|gb|EAZ14601.1| hypothetical protein OsJ_04525 [Oryza sativa Japonica Group]
Length = 616
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/480 (40%), Positives = 291/480 (60%), Gaps = 4/480 (0%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
++ WN + +A R+++ F++M++ P+ +TFP VLK+C R G +
Sbjct: 80 RHAFPWNTLVRLHAAASPRRSLLY-FSRMRRAAVAPDAYTFPAVLKACGCAPGCRVGLVV 138
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H ++ G A++F ALI Y + KVF + R++V W SM+ GY+ CG++
Sbjct: 139 HGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVF-DHGVRDLVSWNSMVAGYVGCGEV 197
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANN 241
A+ LF+ +RD W T++ GY ++ ++ AR+LFDQMP +D++ WN+M+ GYA +
Sbjct: 198 DLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARH 257
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G ++E + LFEEMPERNV SW+ +I GY G E L+ F+RML G + P+ V
Sbjct: 258 GRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCG-IKPDRVAAVGA 316
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
++ACA+LGAL+ +W+H Y E +V V ALIDMY KCG ++ A +F SM K +
Sbjct: 317 VAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFESMPKKSV 376
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+TWN +I GL HG G A+ LF++M+ D ++ + +L +CTH GLV EGL F
Sbjct: 377 VTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSEGLGIFYR 436
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M D + P++EHYG ++DLL RAGR+ +A + ++ MP+E +W +LL SCR ++ VE
Sbjct: 437 MEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVE 496
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAEL++ERL L + +V+LSNIY D G W DV RI+ M G KK G S IEV+
Sbjct: 497 LAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVD 556
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 301/533 (56%), Gaps = 10/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+TSG + + ++ A+ +Q+ A MFD++ ++++V WN M +GYAQN
Sbjct: 51 EIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNG 110
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + ++L +M + P+ T +L + LR G +H VL+ GF + + V T
Sbjct: 111 FAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVST 170
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+++YS ++ A +F MD R VV W SMI+GY+ GD A +F+ + V
Sbjct: 171 ALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQP 230
Query: 200 WNTIVSGYI-------DVRNMIEARKLFDQMP-KKDVISWNTMLSGYANNGDVEECKRLF 251
N V G + D+ KL DQ+ DV N+++S Y+ V+ +F
Sbjct: 231 TNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIF 290
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ + + + SWN +I GYA NG E L+AF M + + P+ T+V+V+ A A L
Sbjct: 291 KNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSR-NIKPDSFTMVSVIPALAELSIP 349
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+KW+H NV V AL+DMYAKCG I A +F+ M+ + +ITWN +I G
Sbjct: 350 RQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGY 409
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G ++ LF EMK P+ ITF+ L AC+H GLVEEGL +F+SM DY I P
Sbjct: 410 GTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPT 469
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HYG MVDLL RAGRL +A DF+++MPI+ ++ +LG+C+++KNV+L E A +
Sbjct: 470 MDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIF 529
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
+L P + V+L+NIY W VA+++ M +G +K PGCS +E+ NEV
Sbjct: 530 KLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEV 582
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 188/421 (44%), Gaps = 74/421 (17%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M GYA++ + + F++MK P + F +LK C + L+ G+E+H V+ +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---------- 180
F N+F T ++ +Y+ + I AY +F M ER++V W +MI+GY G
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 181 ---------DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE---------------- 215
D ++ + + ++ V GY+ +R E
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYV-LRAGFESLVNVSTALVDMYSKC 179
Query: 216 -----ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
AR +FD M + V+SWN+M+ GY +GD E +F+
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQ------------------ 221
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+ML EG V P + T++ L ACA LG L+ K+VH + +V
Sbjct: 222 -------------KMLDEG-VQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDV 267
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N+LI MY+KC ++ A D+F ++ K L++WN +I G A +G AL+ F EM++
Sbjct: 268 SVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSR 327
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD T + ++ A + + + + + + + + +VD+ A+ G +
Sbjct: 328 NIKPDSFTMVSVIPALAELSIPRQA-KWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHT 386
Query: 451 A 451
A
Sbjct: 387 A 387
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L + I V+ L+K+ ++ ++ A+ + ARK+FD + ++V++WNA
Sbjct: 345 ELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNA 404
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
M +GY + +T V LF +MKK PN TF L +C + EG
Sbjct: 405 MIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG 453
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 288/483 (59%), Gaps = 9/483 (1%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVS+ ++ GY ++ + LF QM + N ++ ++L + + E L
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPER----NHVSYTVLLGGLLDAGRVNEARRLF 166
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ ++ TA++ Y I A +F EM +RNVV WT+MI+GY G++
Sbjct: 167 DEMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVN 222
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
AR LFE+ PER+ + W ++ GYI ++ +A +LF+ MP+ V + N M+ G+ G
Sbjct: 223 LARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+ K +FE+M ER+ +W+ +I Y N E L F+ ML G V PN +++++L+
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRG-VRPNYPSVISILT 341
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
CA L LD+ + VH + +V +ALI MY KCG ++ A VF++ + KD++
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM 401
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+G A HG G AL +FH+M+ AG PDGIT+IG L AC++ G V+EG F SM
Sbjct: 402 WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMT 461
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
++ SI P EHY CMVDLL R+G + EA D +K MP+E DAVIW L+G+CR+++N E+A
Sbjct: 462 VNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E A ++L ELEP N +V+LS+IY +GRW+D ++++ + K PGCS IE ++
Sbjct: 522 EFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKR 581
Query: 544 VML 546
V L
Sbjct: 582 VHL 584
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 172/390 (44%), Gaps = 62/390 (15%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I A+ + AR F+ + + S+NA+ GY +N + LF +M D
Sbjct: 24 IAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRD----- 78
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNG--------FRANIFVGTALIELYSTGKAIE 152
NAL G L L + F ++ T+L+ Y +
Sbjct: 79 ---------LASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA 129
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A ++F +M ERN V +T ++ G + G + AR LF+ P+RDV+ W ++SGY
Sbjct: 130 DAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGR 189
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ EAR LFD+MPK++V+SW M+SGYA NG+V ++LFE MPERN SW ++ GY
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA 249
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G + + F M P ++AC
Sbjct: 250 GHVEDAAELFNAM-------PEHP-----VAAC--------------------------- 270
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NA++ + + G+++ A VF M +D TW+ +I + ALS F EM G
Sbjct: 271 -NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGV 329
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSM 422
P+ + I IL C + +++ G +M
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHAAM 359
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 21/267 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITAC-------AQLKQMTYARKMFDKITDQNVVSWNAMFN 73
IQ V E + + + AC Q + A+ +F+K+ +++ +W+AM
Sbjct: 247 IQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIK 306
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
Y QNEF + F +M PN + +L C + L G E+H +L+ F
Sbjct: 307 AYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM 366
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--- 190
++F +ALI +Y ++ A +VF + +++V+W SMI GY G A +F
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMR 426
Query: 191 ---LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNG 242
++P D I + ++ + E R++F+ M I ++ M+ +G
Sbjct: 427 LAGMSP--DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSG 484
Query: 243 DVEECKRLFEEMP-ERNVFSWNGLIGG 268
VEE L + MP E + W L+G
Sbjct: 485 LVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/158 (18%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ ++ + + +IT + + A+++F +++V WN+M GYAQ+
Sbjct: 354 EVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHG 413
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVG 138
+ +F M+ P+ T+ L +C ++EG E+ + + + + R
Sbjct: 414 LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHY 473
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ +++L +E A+ + M E + V+W +++
Sbjct: 474 SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR----GAGALSLFHEMKN 389
NAL+ Y + + + A+ +F M ++DL ++N +ISGL++ + A AL+ +
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTLPDAAAALA------S 105
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH--YGCMVDLLARAGR 447
P ++F +L GL+ + + FQ M P+ H Y ++ L AGR
Sbjct: 106 IPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGR 158
Query: 448 LAEAVDFVKRMPIEADAVIWANLL-GSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ EA MP + D V W +L G C+ + E L E+ +N ++ + +
Sbjct: 159 VNEARRLFDEMP-DRDVVAWTAMLSGYCQAGRITEARAL----FDEMPKRNVVSWTAMIS 213
Query: 507 IYGDLG 512
Y G
Sbjct: 214 GYAQNG 219
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 290/473 (61%), Gaps = 41/473 (8%)
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
++ + E ++++ ++ +G + F+ T +++ + ++ A ++F ++ NV ++ S
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 172 MINGYI---------------------------------SCGDIVSARC-------LFEL 191
+I Y SC + S L +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
P V+ N ++ Y+ ++++A K+FD+M ++DVISWN++LSGYA G +++ K LF
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
M ++ + SW +I GY G + E +D F+ M G + P++ ++++VL +CA+LG+L
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISLISVLPSCAQLGSL 257
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ KW+H+YAE G+ V NALI+MY+KCG+I A+ +F M+ KD+I+W+T+ISG
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A HG GA+ F+EM+ A P+GITF+G+L AC+H+G+ +EGL YF M DY I P+
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGC++D+LARAG+L AV+ K MP++ D+ IW +LL SCR N+++A +A++ L
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP++ N+V+L+NIY DLG+W+DV+R++ +R+ KK PG S IEVN +V
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIV 490
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 202/408 (49%), Gaps = 43/408 (10%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+++++ +I ++ GL +S ++ +++ C +++ M YA ++F+++++ NV +N
Sbjct: 18 QRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYN 77
Query: 70 AMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
++ Y N + V+ ++ Q+ +K +P+ FTFP + KSC + + G+++H + K
Sbjct: 78 SIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK 137
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G R ++ ALI++Y + A+KVF EM ER+V+ W S+++GY G + A+ L
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS-------------- 230
F L ++ ++ W ++SGY + +EA F +M + D IS
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 231 ----W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
W N ++ Y+ G + + +LF +M ++V SW+ +I GY
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQG 328
A +G ++ F M +V PN T + +LSAC+ +G ++ + + +
Sbjct: 318 AYHGNAHGAIETFNEM-QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ LID+ A+ G +E AV++ +M K D W +++S G
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 303/537 (56%), Gaps = 42/537 (7%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK----QMTYARKMFDKITDQNVVS 67
L T HLHQ ++ SGL + R++ ACA L + +A+ +F + +
Sbjct: 21 LTATSHLHQAHAHLIVSGLASHPFTVTRLL-ACAALSPSASDLPHAKTIFLHTHNPSPFM 79
Query: 68 WNAMFNGYAQNEFHRTV--VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+N + + RT+ V + M P+ FTFP ++KS G +LH
Sbjct: 80 FNTIIMASS-----RTLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAH 134
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
V+K G ++FV +I LYS+ + + +A KVF DE +V
Sbjct: 135 VVKFGLDRDVFVVNNMIALYSSFRELRSARKVF---DESYSLV----------------- 174
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
DV+ W T+++G+ + + EARK+FD MP K+ +SWN M+SGYA + +
Sbjct: 175 ----------DVVSWTTLITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRIN 224
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E ++LF+EMP+R+ SW+ ++ GY+ G+ E LD F M+T ++ PN+A +V+ +SAC
Sbjct: 225 EARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSAC 284
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A+L AL+ +W+H Y + + NV +G L+DMY KCG I +A VFN M +++ +WN
Sbjct: 285 AQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWN 344
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++I+GLA++G G AL+LF +M+ G P+ ITFI +L C+H GL+ EG F M
Sbjct: 345 SMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQV 404
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I PQ++HYGCMVDLL RAG + EA+DFV++MP++ + +W L+G+CR++ VEL E
Sbjct: 405 YGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEE 464
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+RL +LEP + + +L NI+ RW DVA ++ + K PG + + E
Sbjct: 465 LGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPGNNGLGAEE 521
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 183/455 (40%), Positives = 276/455 (60%), Gaps = 33/455 (7%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + P FTF ++K+C ++ L GE +H + K GF +++FV TAL++ Y
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYG---- 56
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ G IV AR +F+ ERDV W T++S +
Sbjct: 57 ---------------------------NAGKIVEARRVFDEMSERDVFAWTTMISVHART 89
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M AR+LFD+MP ++ SWN M+ GY+ +VE + LF +MP R++ SW +I Y+
Sbjct: 90 GDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYS 149
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
N F E L F M T G + P++ T+ T++SACA LGALD K +H+YA G+ +V
Sbjct: 150 QNKQFREALAVFNEMQTNG-IDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDV 208
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+G+ALIDMYAKCG ++ ++ VF + K+L WN+II GLA+HG AL++F M+
Sbjct: 209 YIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQRE 268
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
P+G+TFI +L ACTH GLVEEG F SM+ D+SI P+IEHYGCMVDLL +AG L +
Sbjct: 269 KIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLED 328
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A++ V+ M +E ++VIW LLG C++++N+++A++A+ LEP N + +L N+Y +
Sbjct: 329 ALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAE 388
Query: 511 LGRWKDVARIKVAMRDTGFKKL-PGCSSIEVNEVV 544
+ RW +VA I+ M++ G +K PG S IE++ +
Sbjct: 389 VNRWSEVANIRATMKELGVEKTSPGSSWIEMDRKI 423
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I ++L+ + A +F ++ +++++SW M Y+QN+ R + +F +M+ P+
Sbjct: 113 MIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPD 172
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T ++ +C + AL G+E+H ++ GF ++++G+ALI++Y+ +++ + VF
Sbjct: 173 EVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFF 232
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDVRNMIE 215
++ ++N+ W S+I G G A +F + + + +++ + E
Sbjct: 233 KLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEE 292
Query: 216 ARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
RK F M + ++ + M+ G +E+ L M E N W L+GG
Sbjct: 293 GRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGG 351
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH L+ K +H ++ G + YI +I A+ + + +F K+ +N+
Sbjct: 184 AHLGALDLGKEIHLYAMEM---GFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN++ G A + + + +F++M++ PN TF VL +C + EG + L
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRK-RFLS 299
Query: 127 LKNGFR--ANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ F I +++L +E A ++ M E N V+W +++ G
Sbjct: 300 MSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGG 351
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 309/537 (57%), Gaps = 41/537 (7%)
Query: 12 LETTKHLHQIQTQVVTSGLEKS-DYITPRIITACAQLKQMT-------YARKMFDKITDQ 63
L K L QI ++ +G + +++ ++T L T YA ++F +I
Sbjct: 12 LPNLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQP 71
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ +N M G +Q+ + L+T+M + + +TFP VLK+C ++ + G +H
Sbjct: 72 DTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVH 131
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+VL+ GF +N V L+ ++ CGD+
Sbjct: 132 GMVLRLGFGSNAVVRNTLLVFHA-------------------------------KCGDLN 160
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A LF+ + + DV+ W+++++GY ++ ARKLF++MP++D++SWN M++GY G+
Sbjct: 161 VATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGE 220
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E + LF+E P ++V SWN +I GY GL + L+ F M G VFP++ T++++LS
Sbjct: 221 MESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAG-VFPDEVTLLSLLS 279
Query: 304 ACARLGALDFSKWVHVYA-EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA LG L+ K VH E + + + +GNALIDMYAKCG I+ ++DVF S+ KD+I
Sbjct: 280 ACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVI 339
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN++I G+A+HG G +LSLF M+ P+ ITF+G+L AC+H G ++EG YF M
Sbjct: 340 SWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLM 399
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ +Y I P I H GCMVD+L RAG L EA F+ M IE +A+IW LL +C+V+ +VEL
Sbjct: 400 SSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVEL 459
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
A++A E+L + + ++V++SN+Y G W +++ M D+G K+ G S +E
Sbjct: 460 AKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/537 (36%), Positives = 304/537 (56%), Gaps = 52/537 (9%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVSWNA 70
++ + L Q+ +V +G + I I+ +A + + + YA +FD++ ++N +WN
Sbjct: 26 KSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNT 85
Query: 71 MFNGYAQNE-FHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
+ A+ + H +++F QM + PN FTFP VLK+C + L EG+++H L+LK
Sbjct: 86 VIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLK 145
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
FG +D+ VV T+++ Y+ CG + A L
Sbjct: 146 -----------------------------FGLVDDEFVV--TNLLRMYVMCGSMEDANVL 174
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEEC 247
F V G DVRN++ D+ ++ +V+ N M+ GYA G+++
Sbjct: 175 FYRN-----------VEGVDDVRNLVR-----DERGREFNVVLCNVMVDGYARVGNLKAA 218
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ LF+ M +R+V SWN +I GYA NG + E ++ F RM+ G V PN T+V+VL A +R
Sbjct: 219 RELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISR 278
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LG L+ KWVH+YAE N + + +G+AL+DMYAKCG IE A+ VF + ++ITWN +
Sbjct: 279 LGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAV 338
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I GLAMHG+ + M+ G P +T+I IL AC+H GLV+EG S+F M
Sbjct: 339 IGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVG 398
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P+IEHYGCMVDLL RAG L EA + + MP++ D VIW LLG+ +++KN+++ A
Sbjct: 399 LKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAA 458
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E L ++ P + +V LSN+Y G W VA +++ M+D +K PGCS IE++ V+
Sbjct: 459 EVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVI 515
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 303/534 (56%), Gaps = 10/534 (1%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+HL QI ++V SGL+ + ++ +++ + L Q+ YARK+FD+ +V WNA+ Y
Sbjct: 70 RHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSY 129
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
++N +R V ++ M+ P+ FTFP VLK+C ++ +H ++K GF +++
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDV 189
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL---- 191
FV L+ LY+ I A VF + R +V WTS+I+GY G V A +F
Sbjct: 190 FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML----SGYANNGDVEEC 247
+ D I +I+ Y DV ++ + R + + K + +L + YA G V
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVA 309
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
K F++M NV WN +I GYA NG E ++ F M++ + P+ T+ + + A A+
Sbjct: 310 KSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN-IKPDSVTVRSAVLASAQ 368
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+G+L+ ++W+ Y + Y ++ V +LIDMYAKCG +E A VF+ KD++ W+ +
Sbjct: 369 VGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAM 428
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I G +HG+G A++L+H MK AG P+ +TFIG+L AC H GLV+EG F M D+
Sbjct: 429 IMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DFE 487
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
IVP+ EHY C+VDLL RAG L EA F+ ++PIE +W LL +C++Y+ V L E A
Sbjct: 488 IVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAA 547
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+L L+P N ++V LSN+Y W VA ++V MR+ G K G S IE+N
Sbjct: 548 NKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEIN 601
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/444 (43%), Positives = 273/444 (61%), Gaps = 1/444 (0%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ +TF ++LK C +A R+G ++H +VLKN F +++VGT+L+++Y + A KV
Sbjct: 121 PSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKV 180
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F EM R++V WT++I GY CGD+V AR LF+ +RDV +N ++ GY+ + M AR
Sbjct: 181 FDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLAR 240
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
LFD+M K+VISW +M+ GY+ +GDV+E + LF+ MPE+NV SWN +I GY NG +
Sbjct: 241 DLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHD 300
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
L F M V N+ T+V+VL A A L ALD WVH + + N G+V V NAL+
Sbjct: 301 ALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALV 360
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
DMYAKCG I A VF M KD +WN +I+G ++G AL +F M G P+ I
Sbjct: 361 DMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQI 420
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T +L AC H GLVEEG F++M + IVPQIEHYGCM+DLL RAGRL EA ++
Sbjct: 421 TMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQA 479
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP + + +I + L +C +++V AE L+ ++E + ++VML N+Y RW DV
Sbjct: 480 MPYDPNEIILTSFLFACCYFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADV 539
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVN 541
+K M+ G K S IEV+
Sbjct: 540 EDVKEMMKKRGSNKEVAWSVIEVD 563
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 312/602 (51%), Gaps = 78/602 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS------------ 67
+I +++ + +I R++ A + ARK+FD++ +N S
Sbjct: 40 RIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFG 99
Query: 68 -------------------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
WNAM +G+AQ++ + F M D + N ++F L
Sbjct: 100 KLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALS 159
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+C + L G ++H L+ K+ + ++++G+AL+++YS + A + F M RN+V
Sbjct: 160 ACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVS 219
Query: 169 WTSMINGY-------------------------ISCGDIVSA---------------RCL 188
W S+I Y I+ +VSA R +
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVV 279
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
D++L N +V Y R + EAR +FD+MP ++V+S +M+ GYA V+ +
Sbjct: 280 KRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAAR 339
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F M E+NV SWN LI GY NG E + F +L ++P T +L+ACA L
Sbjct: 340 LMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLF-LLLKRESIWPTHYTFGNLLNACANL 398
Query: 309 GALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
L + H +G+ + ++ VGN+LIDMY KCG++E+ VF M +D++
Sbjct: 399 ADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVV 458
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN +I G A +G G AL +F +M +G+ PD +T IG+L AC+H GLVEEG YF SM
Sbjct: 459 SWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSM 518
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ + P +H+ CMVDLL RAG L EA D ++ MP++ D V+W +LL +C+V+ N+EL
Sbjct: 519 RTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIEL 578
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+ E+L E++P N +V+LSN+Y +LGRWKDV R++ MR G K PGCS IE+
Sbjct: 579 GKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQS 638
Query: 543 VV 544
V
Sbjct: 639 RV 640
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 195/469 (41%), Gaps = 94/469 (20%)
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
H V L ++ LD+ P F +L SCV+ + + +H ++K F + IF+
Sbjct: 4 HGFVQKLVGELCFLDSSP----FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNR 59
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L++ Y E A KVF M +RN + ++++ G + A +F+ PE D W
Sbjct: 60 LVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSW 119
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSG------------------- 237
N +VSG+ EA + F M +D + S+ + LS
Sbjct: 120 NAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISK 179
Query: 238 ----------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
Y+ G V +R F+ M RN+ SWN LI Y NG + L+
Sbjct: 180 SRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEV 239
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV-YAEYNGYQGNVCVGNALIDMY 340
F M+ G V P++ T+ +V+SACA A+ +H + + Y+ ++ +GNAL+DMY
Sbjct: 240 FVMMMDNG-VEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMY 298
Query: 341 AKCGIIENAVDVFNSMD-------------------------------TKDLITWNTIIS 369
AKC + A VF+ M K++++WN +I+
Sbjct: 299 AKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIA 358
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC-----------THMGLVEEGLSY 418
G +G A+ LF +K P TF +L AC H +++ G +
Sbjct: 359 GYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGF-W 417
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
FQS V ++D+ + G + + +RM +E D V W
Sbjct: 418 FQSGEESDIFVGN-----SLIDMYMKCGMVEDGCLVFERM-VERDVVSW 460
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 320/567 (56%), Gaps = 48/567 (8%)
Query: 23 TQVVTSGLEKSDYITPRIITACAQLKQMT------YARKMFDKITDQNVVS--------W 68
++ T+G K+ +T RI+ A A +AR +F + ++V W
Sbjct: 2 ARLXTTGFIKNPNLTTRIVLAFASSSSSRRPFLAEFARCVFHEYHSRSVSPGEIKDPFLW 61
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NA+ ++ R ++LF M + + + F+ +VLK+C ++ +EG ++H ++K
Sbjct: 62 NAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKACSRLGFAKEGMQVHGFLIK 121
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ +++F+ LI LY + A +VF M +R+ V + SMI+GY+ CG + SA L
Sbjct: 122 SRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGEL 181
Query: 189 FELAP--ERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
F+L P +R++I WN+++ GY + + A KLFD+MP+KD+ISWN+M+ GY +G +E
Sbjct: 182 FDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMIGGYVKHGRIE 241
Query: 246 ECKRLFEEMPERNVFSW-------------------------------NGLIGGYANNGL 274
+ K LF+ MP R+V +W N ++ G+ N
Sbjct: 242 DAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRY 301
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E L+ F M E + P++ T+V VLSA A+LG L + +H+Y + + +G
Sbjct: 302 HIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGV 361
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALIDMY+KCG I++A+ VF +++K + WN +I GLA+HG G A + +++ P
Sbjct: 362 ALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKP 421
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+LAR+G + A +
Sbjct: 422 DHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNL 481
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ MPIE + VIW L +C +K E EL + L NP+++V+LSN+Y G W
Sbjct: 482 IEEMPIEPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASNGMW 541
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVN 541
KDV R++ M++ +KLPGCS IE++
Sbjct: 542 KDVRRVRTMMKEKKIEKLPGCSWIELD 568
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 283/473 (59%), Gaps = 41/473 (8%)
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
++ + E +++H ++ +G + F+ T +++L ++ A ++F ++ NV ++ S
Sbjct: 19 RVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNS 78
Query: 172 MINGYI---------------------------------SCGDIVSARC-------LFEL 191
+I Y SC + S L++
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKF 138
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
P V+ N ++ Y+ ++++A K+FD+M ++DVISWN++LSGYA G +++ K LF
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
M ++ + SW +I GY G + E +D F+ M G + P++ ++++VL +CA LG+L
Sbjct: 199 HLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISLISVLPSCAHLGSL 257
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ KW+H+YAE G V NALI+MY+KCG++ A+ +F KD+I+W+T+ISG
Sbjct: 258 ELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGY 317
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A HG A F EM+ A P+GITF+G+L AC+H+GL ++GL YF M DY I P+
Sbjct: 318 AYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPK 377
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGC++D+LARAG+L AV+ K MP++ D+ IW +LL SCR N+++A +A++ L
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLV 437
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E+EP + N+V+L+NIY DLG+W+DV+R++ +R KK PGCS IEVN +V
Sbjct: 438 EVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVNNIV 490
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 199/408 (48%), Gaps = 43/408 (10%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+++++ +I ++ GL +S ++ +++ C +L M YA ++F+++++ NV +N
Sbjct: 18 QRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYN 77
Query: 70 AMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
++ Y N + V+ ++ Q+ +K P+ FTFP + KSC + + G+++H + K
Sbjct: 78 SIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYK 137
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G R ++ ALI++Y + A+KVF EM ER+V+ W S+++GY G + A+ L
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS-------------- 230
F L ++ ++ W ++SGY + +EA F +M + D IS
Sbjct: 198 FHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSL 257
Query: 231 ----W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
W N ++ Y+ G + + +LFE+ ++V SW+ +I GY
Sbjct: 258 ELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGY 317
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQG 328
A +G + F M +V PN T + +LSAC+ +G K+ + + +
Sbjct: 318 AYHGNAHRAFETFIEM-QRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEP 376
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ LID+ A+ G +E AV++ +M K D W +++S G
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKG 424
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH LE K +H + GL K + +I ++ ++ A ++F++ ++V+
Sbjct: 252 AHLGSLELGKWIHMYAER---RGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVI 308
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW+ M +GYA + F +M++ PN TF +L +C + ++G + ++
Sbjct: 309 SWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMM 368
Query: 127 LKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGD--- 181
++ I LI++ + +E A ++ M + + +W S+++ + G+
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDV 428
Query: 182 -IVSARCLFELAPE 194
+V+ L E+ P+
Sbjct: 429 ALVAMDHLVEVEPD 442
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 310/536 (57%), Gaps = 15/536 (2%)
Query: 20 QIQTQVVTSGLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ- 77
Q+ + + +G+ SDYI ++ + + A +F+ NVV WN M + Q
Sbjct: 265 QLHSYLFKAGI-SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQI 323
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N+ ++ LF QM+ PN FT+P +L++C + GE++H L +K GF ++++V
Sbjct: 324 NDLAKSFE-LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSA-RCLFELAP 193
LI++YS +E A +V + E++VV WTSMI GY+ C D ++A + + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 194 ERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
D I + +SG + M I AR ++ DV WN +++ YA G + E
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHAR-IYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
FEE+ ++ +WNGL+ G+A +GL E L F RM G V N T V+ LSA A L
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANL 560
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+ K +H G+ VGNALI +Y KCG E+A F+ M ++ ++WNTII
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ + HGRG AL LF +MK G P+ +TFIG+L AC+H+GLVEEGLSYF+SM+ +Y I
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P+ +HY C++D+ RAG+L A F++ MPI ADA++W LL +C+V+KN+E+ E A +
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAK 740
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ELEP + A++V+LSN Y +W + +++ MRD G +K PG S IEV VV
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 796
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 220/467 (47%), Gaps = 25/467 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + VT GL K + +I ++ + AR++F++++ ++ VSW AM +GYAQN
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L+ QM + +P + VL SC K +G +H K+GF + IFVG
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
A+I LY + A +VF +M R+ V + ++I+G+ CG A +FE L+P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + +++++ + ++ + +L + K D I ++L Y GDVE
Sbjct: 243 --DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F NV WN ++ + + + F +M G + PN T +L C
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTR 359
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+D + +H + G++ ++ V LIDMY+K G +E A V + KD+++W ++I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL+ F EM+ G PD I + C + + +GL Y +
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
D SI + +V+L AR GR+ EA + + D + W L+
Sbjct: 480 DVSI------WNALVNLYARCGRIREAFSSFEEIE-HKDEITWNGLV 519
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L K QI +V+ +G + +I+ + A+ F +++++N VSW
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVL 127
N + +Q+ + LF QMKK PN TF VL +C + + EG +
Sbjct: 617 NTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSD 676
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGD 181
+ G R +I+++ ++ A K EM + +VW ++++ I G+
Sbjct: 677 EYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGE 736
Query: 182 IVSARCLFELAP 193
+A+ L EL P
Sbjct: 737 F-AAKHLLELEP 747
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 259/426 (60%), Gaps = 14/426 (3%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
N L+ Y I A KVF +M ERNVV WT+MI GY+ G I A LF P
Sbjct: 24 NTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMP 83
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
ER+V+ W ++ G I+ + EAR+LFD MP KDV++ M+ G + G + E + +F+E
Sbjct: 84 ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDE 143
Query: 254 MPERNVFSWNGLIGG-------------YANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
MP+RNV +W +I G Y G E L F M EG V P+ ++++
Sbjct: 144 MPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREG-VRPSFPSVIS 202
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
VLS C L +LD + VH + + ++ V + LI MY KCG + A VF+ +KD
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKD 262
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
++ WN+II+G A HG G AL +FH+M ++ PD ITFIG+L AC++ G V+EGL F+
Sbjct: 263 IVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFE 322
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
SM Y + P+ EHY CMVDLL RAG+L EA++ ++ MP+EADA++W LLG+CR +KN+
Sbjct: 323 SMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNL 382
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+LAE+A ++L +LEP N +++LSN+Y RWKDV ++ MR +K PGCS IEV
Sbjct: 383 DLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEV 442
Query: 541 NEVVML 546
++ V +
Sbjct: 443 DKKVHI 448
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 166/363 (45%), Gaps = 42/363 (11%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ Q ++ ARK+FDK+ ++NVVSW AM GY Q +LF +M + N
Sbjct: 31 LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPER----N 86
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE-LYSTGKAIEAAYKVF 158
++ ++L ++ + E +L ++ ++ T +I+ L S G+ IEA ++F
Sbjct: 87 VVSWTVMLGGLIEDGRVDEARQLFDMMPVK----DVVASTNMIDGLCSEGRLIEAR-EIF 141
Query: 159 GEMDERNVVVWTSMING-------------YISCGDIVSARCLFELAPERDVILWNTIVS 205
EM +RNVV WTSMI+G Y G + A LF L V V
Sbjct: 142 DEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVI 201
Query: 206 GYIDV----RNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ V ++ R++ Q+ + D+ + +++ Y GD+ KR+F+ +
Sbjct: 202 SVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSK 261
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD----- 312
++ WN +I GYA +G + L+ F M + + P++ T + VLSAC+ G +
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSS-IAPDEITFIGVLSACSYTGKVKEGLEI 320
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGL 371
F Y + C ++D+ + G + A+++ +M + D I W ++
Sbjct: 321 FESMKSKYQVDPKTEHYAC----MVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGAC 376
Query: 372 AMH 374
H
Sbjct: 377 RTH 379
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 29/299 (9%)
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
++GY + EARKLFD+MP+ + ISWN ++SGY NG + E +++F++MPERNV SW
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I GY GL E F RM N + +L G +D ++ +
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPER-----NVVSWTVMLGGLIEDGRVDEARQLFDMMPV 115
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG---- 379
+V +ID G + A ++F+ M ++++ W ++ISG G +
Sbjct: 116 K----DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKI 171
Query: 380 ---------ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIV 429
AL+LF M+ G P + I +L C + ++ G + Q + + I
Sbjct: 172 YERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI- 230
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
I ++ + + G L A R D V+W +++ Y E ALE
Sbjct: 231 -DIYVSSVLITMYIKCGDLVTAKRVFDRFS-SKDIVMWNSIIAG---YAQHGFGEKALE 284
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 30/280 (10%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNG-------------YAQNEFHRTVVVLFTQMKKLD 95
++ AR++FD++ +NVV+W +M +G Y + F + LF+ M++
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREG 192
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
P+ + VL C + +L G ++H ++++ F +I+V + LI +Y + A
Sbjct: 193 VRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAK 252
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYID 209
+VF +++V+W S+I GY G A +F +AP D I + ++S
Sbjct: 253 RVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAP--DEITFIGVLSACSY 310
Query: 210 VRNMIEARKLFDQMPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMP-ERNVFSWN 263
+ E ++F+ M K + T M+ G + E L E MP E + W
Sbjct: 311 TGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 370
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
L+G + A K++L ++ PN+A +LS
Sbjct: 371 ALLGACRTHKNLDLAEIAAKKLL---QLEPNNAGPYILLS 407
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ +Q+V S + Y++ +IT + + A+++FD+ + +++V WN++
Sbjct: 210 LASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSI 269
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYAQ+ F + +F M P+ TF VL +C ++EG E+ +K+ +
Sbjct: 270 IAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF-ESMKSKY 328
Query: 132 RANIFVG--TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VS 184
+ + +++L + A + M E + +VW +++ + ++ ++
Sbjct: 329 QVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIA 388
Query: 185 ARCLFELAPER--DVILWNTIVSGYIDVRNMIEARK 218
A+ L +L P IL + + S ++++E RK
Sbjct: 389 AKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRK 424
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 305/560 (54%), Gaps = 63/560 (11%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK------ 93
+I A+ + A+K+FD++ +NVVSWN++ +GY +N + + F M +
Sbjct: 146 LIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSW 205
Query: 94 ------------LDA---------MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
LD+ PN ++ +L + E L
Sbjct: 206 NLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNL----FNEMPT 261
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N+ A+I Y I+ AYK+F EM E++ V WT+MINGY+ G ++ AR + L
Sbjct: 262 KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLM 321
Query: 193 PE-------------------------------RDVILWNTIVSGYIDVRNMIEARKLFD 221
P RD + WN++++GY EA +LF
Sbjct: 322 PYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQ 381
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+M KD++SWNTM++ YA G +++ +F EM ERNV SWN LI GY NGL+FE L+
Sbjct: 382 EMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNC 441
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F M +G P+ TIV L A A L AL+ +H G+ ++ V NA++ MYA
Sbjct: 442 FILMKQQGEK-PDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYA 500
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
K G + A +VF + KD+++WN++I+G A++G G A+ LF M G +PD +TF G
Sbjct: 501 KSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTG 560
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
+L AC H G V++GL+ F+SM YSI PQ EHY C+++LL R GRL EAV+ V+ M
Sbjct: 561 LLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTV 620
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
+ A IW LL +CR++ N+ELA+ + ERL LEP+N +N+V+LSN++ + GRW V R++
Sbjct: 621 SSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVR 680
Query: 522 VAMRDTGFKKLPGCSSIEVN 541
V M++ +K PGCS IE++
Sbjct: 681 VLMKENKAEKQPGCSWIEID 700
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 147/585 (25%), Positives = 255/585 (43%), Gaps = 99/585 (16%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+A A+ ++ AR++FD + +N+VSWN+M GY NE LF +M K D
Sbjct: 52 MISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRD---- 107
Query: 100 CFTFPIVLKSCVKINALREGEELHCL-------VLKNGFRA------------------- 133
+++ +++ +I L + EL L V +N A
Sbjct: 108 IYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEML 167
Query: 134 --NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
N+ +++ Y+ ++ + F M ERNVV W M++GY+ GD+ SA F+
Sbjct: 168 VKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKK 227
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
P +V+ W T++SG+ M EAR LF++MP K+++SWN M+ Y +++ +LF
Sbjct: 228 IPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLF 287
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EMPE++ SW +I GY G + + M + N A +++ + G +
Sbjct: 288 MEMPEKDSVSWTAMINGYVRVGKLLQAREILNLM-----PYKNIAAQTAMINGYLQSGRM 342
Query: 312 D-----FSK--------WVHVYAEYNG----------YQGNVCVG----NALIDMYAKCG 344
D FS+ W + Y +Q VC N +I YA+ G
Sbjct: 343 DEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAG 402
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
++ A+++FN M +++++WN++I+G +G AL+ F MK GE PD T + L
Sbjct: 403 QMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLR 462
Query: 405 ACTHMGLVEEGLSYFQ------------------SMAMDYSIVPQIEH------------ 434
A ++ + G+ +M VP+ E+
Sbjct: 463 ASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVS 522
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVELAELALERLT 491
+ ++ A G EAV+ + MP+ D V + LL +C V+ + +T
Sbjct: 523 WNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMT 582
Query: 492 ELEPKNPA--NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
E P ++ + N+ G +GR ++ I M+ K+ G
Sbjct: 583 ETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWG 627
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 172/327 (52%), Gaps = 21/327 (6%)
Query: 136 FVGTALIELYSTGKA--IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+V T + + G++ IE A VF +M ERN+V + SMI+ Y G I +AR LF+L P
Sbjct: 14 YVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMP 73
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+R+++ WN++++GY+ + +A +LFD+M K+D+ SW M++ Y G++E+ + LF
Sbjct: 74 QRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNL 133
Query: 254 MPER-NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+P++ + N LI GYA LF E F ML + V N ++LS + G +
Sbjct: 134 LPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWN-----SILSGYTKNGKMQ 188
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ E G + NV N ++D Y G +++A F + T ++++W T++SG A
Sbjct: 189 LG---LQFFEAMG-ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFA 244
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+GR A +LF+EM + +++ ++ A +++ F M S+
Sbjct: 245 HYGRMTEARNLFNEMPT----KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSV---- 296
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ M++ R G+L +A + + MP
Sbjct: 297 -SWTAMINGYVRVGKLLQAREILNLMP 322
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 199/443 (44%), Gaps = 55/443 (12%)
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY--- 176
EE + LK R NI ++I Y+ I A ++F M +RN+V W SMI GY
Sbjct: 32 EEAVAVFLKMTER-NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHN 90
Query: 177 ------------------------ISC----GDIVSARCLFELAPER-DVILWNTIVSGY 207
I+C G++ AR LF L P++ D + N +++GY
Sbjct: 91 ELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGY 150
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
R EA+KLFD+M K+V+SWN++LSGY NG ++ + FE M ERNV SWN ++
Sbjct: 151 AKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVD 210
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY G FK++ T PN + VT+LS A G + ++ +++ E
Sbjct: 211 GYVGVGDLDSAWMFFKKIPT-----PNVVSWVTMLSGFAHYGRMTEAR--NLFNEMP--T 261
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N+ NA+I Y + I++A +F M KD ++W +I+G G+ A + + M
Sbjct: 262 KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLM 321
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
G L G ++E F +++ S+ + M+ A GR
Sbjct: 322 PYKNIAAQTAMINGYL----QSGRMDEANEIFSQISVRDSVC-----WNSMITGYAHCGR 372
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
EA+ + M + D V W ++ + Y + ALE E++ +N ++ L
Sbjct: 373 TDEALRLFQEM-VCKDMVSWNTMIAA---YAQAGQMDKALEMFNEMQERNVVSWNSLITG 428
Query: 508 YGDLGRWKDVARIKVAMRDTGFK 530
Y G + + + M+ G K
Sbjct: 429 YVQNGLYFEALNCFILMKQQGEK 451
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + +G ++ I+T A+ ++ A +F +I ++VVSWN++ GYA N
Sbjct: 475 QLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNG 534
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
+ V LF M +P+ TF +L +C
Sbjct: 535 CGKEAVELFEVMPLRGIIPDEVTFTGLLSAC 565
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 305/560 (54%), Gaps = 63/560 (11%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK------ 93
+I A+ + A+K+FD++ +NVVSWN++ +GY +N + + F M +
Sbjct: 146 LIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSW 205
Query: 94 ------------LDA---------MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
LD+ PN ++ +L + E L
Sbjct: 206 NLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNL----FNEMPT 261
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N+ A+I Y I+ AYK+F EM E++ V WT+MINGY+ G ++ AR + L
Sbjct: 262 KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLM 321
Query: 193 PE-------------------------------RDVILWNTIVSGYIDVRNMIEARKLFD 221
P RD + WN++++GY EA +LF
Sbjct: 322 PYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQ 381
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+M KD++SWNTM++ YA G +++ +F EM ERNV SWN LI GY NGL+FE L+
Sbjct: 382 EMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNC 441
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F M +G P+ TIV L A A L AL+ +H G+ ++ V NA++ MYA
Sbjct: 442 FILMKQQGEK-PDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYA 500
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
K G + A +VF + KD+++WN++I+G A++G G A+ LF M G +PD +TF G
Sbjct: 501 KSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTG 560
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
+L AC H G V++GL+ F+SM YSI PQ EHY C+++LL R GRL EAV+ V+ M
Sbjct: 561 LLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTV 620
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
+ A IW LL +CR++ N+ELA+ + ERL LEP+N +N+V+LSN++ + GRW V R++
Sbjct: 621 SSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVR 680
Query: 522 VAMRDTGFKKLPGCSSIEVN 541
V M++ +K PGCS IE++
Sbjct: 681 VLMKENKAEKQPGCSWIEID 700
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 147/585 (25%), Positives = 255/585 (43%), Gaps = 99/585 (16%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+A A+ ++ AR++FD + +N+VSWN+M GY NE LF +M K D
Sbjct: 52 MISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRD---- 107
Query: 100 CFTFPIVLKSCVKINALREGEELHCL-------VLKNGFRA------------------- 133
+++ +++ +I L + EL L V +N A
Sbjct: 108 IYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEML 167
Query: 134 --NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
N+ +++ Y+ ++ + F M ERNVV W M++GY+ GD+ SA F+
Sbjct: 168 VKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKK 227
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
P +V+ W T++SG+ M EAR LF++MP K+++SWN M+ Y +++ +LF
Sbjct: 228 IPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLF 287
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EMPE++ SW +I GY G + + M + N A +++ + G +
Sbjct: 288 MEMPEKDSVSWTAMINGYVRVGKLLQAREILNLM-----PYKNIAAQTAMINGYLQSGRM 342
Query: 312 D-----FSK--------WVHVYAEYNG----------YQGNVCVG----NALIDMYAKCG 344
D FS+ W + Y +Q VC N +I YA+ G
Sbjct: 343 DEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAG 402
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
++ A+++FN M +++++WN++I+G +G AL+ F MK GE PD T + L
Sbjct: 403 QMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLR 462
Query: 405 ACTHMGLVEEGLSYFQ------------------SMAMDYSIVPQIEH------------ 434
A ++ + G+ +M VP+ E+
Sbjct: 463 ASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVS 522
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVELAELALERLT 491
+ ++ A G EAV+ + MP+ D V + LL +C V+ + +T
Sbjct: 523 WNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMT 582
Query: 492 ELEPKNPA--NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
E P ++ + N+ G +GR ++ I M+ K+ G
Sbjct: 583 ETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWG 627
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 172/327 (52%), Gaps = 21/327 (6%)
Query: 136 FVGTALIELYSTGKA--IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+V T + + G++ IE A VF +M ERN+V + SMI+ Y G I +AR LF+L P
Sbjct: 14 YVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMP 73
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+R+++ WN++++GY+ + +A +LFD+M K+D+ SW M++ Y G++E+ + LF
Sbjct: 74 QRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNL 133
Query: 254 MPER-NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+P++ + N LI GYA LF E F ML + V N ++LS + G +
Sbjct: 134 LPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWN-----SILSGYTKNGKMQ 188
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ E G + NV N ++D Y G +++A F + T ++++W T++SG A
Sbjct: 189 LG---LQFFEAMG-ERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFA 244
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+GR A +LF+EM + +++ ++ A +++ F M S+
Sbjct: 245 HYGRMTEARNLFNEMPT----KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSV---- 296
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ M++ R G+L +A + + MP
Sbjct: 297 -SWTAMINGYVRVGKLLQAREILNLMP 322
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 193/429 (44%), Gaps = 54/429 (12%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY----------------- 176
NI ++I Y+ I A ++F M +RN+V W SMI GY
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 177 ----------ISC----GDIVSARCLFELAPER-DVILWNTIVSGYIDVRNMIEARKLFD 221
I+C G++ AR LF L P++ D + N +++GY R EA+KLFD
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFD 164
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+M K+V+SWN++LSGY NG ++ + FE M ERNV SWN ++ GY G
Sbjct: 165 EMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMF 224
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
FK++ T PN + VT+LS A G + ++ +++ E N+ NA+I Y
Sbjct: 225 FKKIPT-----PNVVSWVTMLSGFAHYGRMTEAR--NLFNEMP--TKNLVSWNAMIGAYV 275
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
+ I++A +F M KD ++W +I+G G+ A + + M G
Sbjct: 276 RENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMING 335
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L G ++E F +++ S+ + M+ A GR EA+ + M +
Sbjct: 336 YL----QSGRMDEANEIFSQISVRDSVC-----WNSMITGYAHCGRTDEALRLFQEM-VC 385
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
D V W ++ + Y + ALE E++ +N ++ L Y G + +
Sbjct: 386 KDMVSWNTMIAA---YAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCF 442
Query: 522 VAMRDTGFK 530
+ M+ G K
Sbjct: 443 ILMKQQGEK 451
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + +G ++ I+T A+ ++ A +F +I +++VVSWN++ GYA N
Sbjct: 475 QLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNG 534
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
+ V LF M +P+ TF +L +C
Sbjct: 535 CGKEAVELFEVMPLRGIIPDEVTFTGLLSAC 565
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 310/536 (57%), Gaps = 15/536 (2%)
Query: 20 QIQTQVVTSGLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ- 77
Q+ + + +G+ SDYI ++ + + A +F+ NVV WN M + Q
Sbjct: 265 QLHSYLFKAGI-SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQI 323
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N+ ++ LF QM+ PN FT+P +L++C + GE++H L +K GF ++++V
Sbjct: 324 NDLAKSFE-LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSA-RCLFELAP 193
LI++YS +E A +V + E++VV WTSMI GY+ C D ++A + + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 194 ERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
D I + +SG + M I AR ++ DV WN +++ YA G + E
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHAR-IYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
FEE+ ++ +WNGL+ G+A +GL E L F RM G V N T V+ LSA A L
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANL 560
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+ K +H G+ VGNALI +Y KCG E+A F+ M ++ ++WNTII
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ + HGRG AL LF +MK G P+ +TFIG+L AC+H+GLVEEGLSYF+SM+ +Y I
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P+ +HY C++D+ RAG+L A F++ MPI ADA++W LL +C+V+KN+E+ E A +
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAK 740
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ELEP + A++V+LSN Y +W + +++ MRD G +K PG S IEV VV
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 796
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 220/467 (47%), Gaps = 25/467 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + VT GL K + +I ++ + AR++F++++ ++ VSW AM +GYAQN
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L+ QM + +P + VL SC K +G +H K+GF + IFVG
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
A+I LY + A +VF +M R+ V + ++I+G+ CG A +FE L+P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + +++++ + ++ + +L + K D I ++L Y GDVE
Sbjct: 243 --DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F NV WN ++ + + + F +M G + PN T +L C
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTR 359
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+D + +H + G++ ++ V LIDMY+K G +E A V + KD+++W ++I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL+ F EM+ G PD I + C + + +GL Y +
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
D SI + +V+L AR GR+ EA + + D + W L+
Sbjct: 480 DVSI------WNALVNLYARCGRIREAFSSFEEIE-HKDEITWNGLV 519
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L K QI +V+ +G + +I+ + A+ F +++++N VSW
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVL 127
N + +Q+ + LF QMKK PN TF VL +C + + EG +
Sbjct: 617 NTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSD 676
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGD 181
+ G R +I+++ ++ A K EM + +VW ++++ I G+
Sbjct: 677 EYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGE 736
Query: 182 IVSARCLFELAP 193
+A+ L EL P
Sbjct: 737 F-AAKHLLELEP 747
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/549 (36%), Positives = 302/549 (55%), Gaps = 49/549 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN-EFHRTVVVLF-TQMKKLDAM 97
+++A A+L + AR +F+ I D + S+NA+ A++ H + F M D +
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFV 148
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
N ++F L +C R GE++H LV ++ ++ + +AL+++Y+ + E A +V
Sbjct: 149 LNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRV 208
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLF-----------------------ELAPE 194
F M ERNVV W S+I Y G + A LF LA +
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAAD 268
Query: 195 R-----------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
R D++L N +V Y EAR +FD MP + ++S ++L+G
Sbjct: 269 REGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTG 328
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA + +VE+ + +F +M E+NV +WN LI YA NG E + F + L ++P T
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQ-LKRDSIWPTHYT 387
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVD 351
VL+AC + L + HV+ G+ + +V VGN+L+DMY K G I++
Sbjct: 388 YGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF M +D ++WN +I G A +GR AL LF M + E PD +T IG+L AC H GL
Sbjct: 448 VFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGL 507
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V+EG YF SM D+ I P +HY CMVDLL RAG L EA + + MP+E D+V+WA+LL
Sbjct: 508 VDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLL 567
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
G+CR++KNVEL E RL EL+P+N +V+LSN+Y ++G+W +V R++ +M+D G K
Sbjct: 568 GACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSK 627
Query: 532 LPGCSSIEV 540
PGCS IE+
Sbjct: 628 QPGCSWIEI 636
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 185/403 (45%), Gaps = 49/403 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V S +I ++ A+ ++ AR++FD + ++NVVSWN++ Y QN
Sbjct: 172 QVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNG 231
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVG 138
++LF +M P+ T V+ +C + A REG ++H ++K + R ++ +
Sbjct: 232 PVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLN 291
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ A +F M R++V TS++ GY ++ A+ +F E++VI
Sbjct: 292 NALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVI 351
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQM----------------------------------- 223
WN +++ Y EA +LF Q+
Sbjct: 352 AWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHV 411
Query: 224 ----------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
P+ DV N+++ Y G +++ ++FE M R+ SWN +I GYA NG
Sbjct: 412 LKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNG 471
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCV 332
+ L F+RML P+ T++ VLSAC G +D ++ H E +G +
Sbjct: 472 RAKDALHLFERMLCSNE-NPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDH 530
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
++D+ + G ++ A ++ N M + D + W +++ +H
Sbjct: 531 YTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLH 573
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 7/332 (2%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
+ L NT+VS Y + + +AR++FD++P ++ S+N +LS YA G +E + LFE +P
Sbjct: 51 ETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIP 110
Query: 256 ERNVFSWNGLIGGYANNGLFF--EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
+ + S+N ++ A +G + L M + V N + + LSACA
Sbjct: 111 DPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVL-NAYSFASALSACAAEKDSRT 169
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ VH + + +V + +AL+DMYAKC E+A VF++M +++++WN++I+
Sbjct: 170 GEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQ 229
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
+G AL LF EM AG PD +T ++ AC + EG M + +
Sbjct: 230 NGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMV 289
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+VD+ A+ GR EA MP + V ++L NVE A++ ++ E
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRS-IVSETSILTGYAKSANVEDAQVVFSQMVE- 347
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
KN + +L Y G ++ R+ V ++
Sbjct: 348 --KNVIAWNVLIAAYAQNGEEEEAIRLFVQLK 377
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 180/446 (40%), Gaps = 95/446 (21%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L+S ++ R H +LK+ F+ L+ Y+ + A +VF E+ RN
Sbjct: 26 LLRSAPNLSGARAA---HARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRN 82
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI----------------- 208
+ ++++ Y G AR LFE P+ D +N +V+
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAM 142
Query: 209 -----------------------DVRNMIEARKLFDQMPKKDVISWNTMLSG-YANNGDV 244
D R + L + P D + + L YA
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERP 202
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E+ +R+F+ MPERNV SWN LI Y NG E L F M+ G P++ T+ +V+SA
Sbjct: 203 EDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAG-FSPDEVTLSSVMSA 261
Query: 305 CARLGALDFSKWVHVY-AEYNGYQGNVCVGNALIDMYAKCGI------------------ 345
CA L A + VH + + + + ++ + NAL+DMYAKCG
Sbjct: 262 CAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVS 321
Query: 346 -------------IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+E+A VF+ M K++I WN +I+ A +G A+ LF ++K
Sbjct: 322 ETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 393 MPDGITFIGILCAC-----------THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
P T+ +L AC H+ +++EG + D+ + +VD+
Sbjct: 382 WPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRF------DFGPESDVFVGNSLVDM 435
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIW 467
+ G + + +RM D V W
Sbjct: 436 YLKTGSIDDGAKVFERMAAR-DNVSW 460
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 98/249 (39%), Gaps = 27/249 (10%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
G + N L+ YA+ G + +A VF+ + ++ ++N ++S A GR A +LF +
Sbjct: 50 GETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAI 109
Query: 388 KNAGEMPDGITFIGILCACTHMGL--VEEGLSYFQSMAMD------YSIVPQIEHYGCMV 439
+ PD ++ ++ A G + L + +M D YS + C
Sbjct: 110 PD----PDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALS--ACAA 163
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
+ +R G + V R P D I + L+ +Y E E A + +N
Sbjct: 164 EKDSRTGEQVHGL--VARSPHADDVHIRSALVD---MYAKCERPEDARRVFDAMPERNVV 218
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN-EVVMLGCLSRELDRKSI 558
++ L Y G + + V M GF S EV VM C DR+
Sbjct: 219 SWNSLITCYEQNGPVGEALMLFVEMMAAGF------SPDEVTLSSVMSACAGLAADREG- 271
Query: 559 VRAEANMIK 567
+ A+M+K
Sbjct: 272 RQVHAHMVK 280
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 283/536 (52%), Gaps = 71/536 (13%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I++ A ++ AR FD +++ VSWN M Y +N + LF + DA
Sbjct: 206 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDA--- 262
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ NAL G Y IE A K+F
Sbjct: 263 -----------ISWNALMAG-------------------------YVQRSQIEEAQKMFN 286
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M +R+VV W +M++GY GD+ AR LF++AP RDV W IVSGY + EA+++
Sbjct: 287 KMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRV 346
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF---- 275
FD MP K+ +SWN M++ Y +EE K LF+ MP RNV SWN ++ GYA G+
Sbjct: 347 FDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEAR 406
Query: 276 ---------------------------FEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
E L FK M G + N + VLS CA +
Sbjct: 407 AIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGE-WVNRSAFACVLSTCADI 465
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL+ +H GY VGNAL+ MY KCG +E A F M+ +D+++WNT+I
Sbjct: 466 AALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMI 525
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+G A HG G AL +F M+ PD IT +G+L AC+H GLVE+G+SYF SM D+ +
Sbjct: 526 AGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGV 585
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
+ EHY CM+DLL RAGRL EAV+ +K MP E D+ +W LLG+ R+++N EL A E
Sbjct: 586 ATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAE 645
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++ ELEP+N +V+LSNIY G+W+DV +++ M + G KK+PG S IEV V
Sbjct: 646 KIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKV 701
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 24/344 (6%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ A ++F M R+ + +M+ GY + G + A F P D +NT++
Sbjct: 123 VPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVS 182
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
++ + R LFD+MP KD +S+N M+S +AN+G V + F+ PE++ SWNG++ Y
Sbjct: 183 SSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYV 242
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY-QGN 329
NG E + F TE DA L A G + S+ +N Q +
Sbjct: 243 RNGRIQEARELFDSR-TEW-----DAISWNALMA----GYVQRSQIEEAQKMFNKMPQRD 292
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V N ++ YA+ G + A +F+ +D+ TW I+SG A +G A +F M +
Sbjct: 293 VVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPD 352
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
+ +++ ++ A ++EE F +M + + M+ A+AG L
Sbjct: 353 K----NAVSWNAMMAAYVQRRMMEEAKELFDAMP-----CRNVASWNTMLTGYAQAGMLD 403
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
EA MP + DAV WA +L + Y + +E L+ E+
Sbjct: 404 EARAIFGMMP-QKDAVSWAAMLAA---YSQIGFSEETLQLFKEM 443
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 10/222 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++++ +G ++ ++ + M A F+++ +++VVSWN M GYA++
Sbjct: 473 QLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHG 532
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVG 138
F + + +F M+K P+ T VL +C + +G + + G
Sbjct: 533 FGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHY 592
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYI----SCGDIVSARCLFELAP 193
T +I+L ++ A + +M E + +W +++ S +A +FEL P
Sbjct: 593 TCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEP 652
Query: 194 ERD--VILWNTIVSGYIDVRNMIEARKLFDQMPKKDV--ISW 231
E +L + I + R++ + R + + K V SW
Sbjct: 653 ENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSW 694
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 313/538 (58%), Gaps = 15/538 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + LE + Y++ ++ A+ + A+++FDK+ ++VV+WN+M +G++ +E
Sbjct: 140 EIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHE 199
Query: 80 -FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ V L QM+ D PN T VL + ++N+LR G+E+H ++ GF ++ VG
Sbjct: 200 GSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVG 258
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLF--ELAPER 195
T ++++Y + I+ A ++F M +N V W++M+ Y+ C + A LF L +
Sbjct: 259 TGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKD 318
Query: 196 DVILWN-----TIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEE 246
DVI+ + T++ ++ ++ L K D++ NT+LS YA G +
Sbjct: 319 DVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIING 378
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
R F EM R+ S+ +I GY NG E L F M G + P AT+ +VL ACA
Sbjct: 379 AMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSG-INPEKATLASVLPACA 437
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L L + H YA G+ + + NALIDMYAKCG I+ A VF+ M + +++WNT
Sbjct: 438 HLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNT 497
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I +HG G AL LF M++ G PD +TFI ++ AC+H GLV EG +F +M D+
Sbjct: 498 MIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDF 557
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I+P++EHY CMVDLL+RAG E F+++MP+E D +W LL +CRVYKNVEL E
Sbjct: 558 GIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGV 617
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++ +L P++ NFV+LSN+Y +GRW D A+++ ++ GF+K PGCS IE++ VV
Sbjct: 618 SKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVV 675
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 221/435 (50%), Gaps = 29/435 (6%)
Query: 43 ACAQLKQMTYARKMFDKITD--QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
AC++LK AR +FDK+ +NVV WN + YA N + + L+ +M PN
Sbjct: 63 ACSELK---IARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNR 119
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
FTFP VLK+C + EG E+HC + + +N++V TAL++ Y+ ++ A +VF +
Sbjct: 120 FTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDK 179
Query: 161 MDERNVVVWTSMINGY-ISCGDIVS-ARCLFEL----APERDVILWNTIVSGYIDVRNMI 214
M +R+VV W SMI+G+ + G AR L ++ +P I+ ++ V ++
Sbjct: 180 MHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIV--GVLPAVAQVNSLR 237
Query: 215 EARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGY 269
+++ ++ DV+ +L Y ++ +R+F+ M +N +W+ ++G Y
Sbjct: 238 HGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAY 297
Query: 270 ANNGLFFEVLDAFKR--MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
E L+ F + ML + + + T+ TV+ CA L L +H YA +G+
Sbjct: 298 VVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFV 357
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
++ VGN L+ MYAKCGII A+ FN MD +D +++ IISG +G L +F EM
Sbjct: 358 LDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEM 417
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLA 443
+ +G P+ T +L AC H+ GL Y S + Y+I+ ++D+ A
Sbjct: 418 QLSGINPEKATLASVLPACAHLA----GLHY-GSCSHCYAIICGFTADTMICNALIDMYA 472
Query: 444 RAGRLAEAVDFVKRM 458
+ G++ A RM
Sbjct: 473 KCGKIDTARKVFDRM 487
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 169/405 (41%), Gaps = 77/405 (19%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI-TDQNVVSWN 69
Q+ + +H +I V G + I+ + + + YAR++FD + +N V+W+
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLD---AMPNCFTFPIVLKSCVKINALREGEELHCLV 126
AM Y +F R + LF Q+ L + + T V++ C + L G LHC
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYA 351
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA- 185
+K+GF ++ VG L+ +Y+ I A + F EMD R+ V +T++I+GY+ G+
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411
Query: 186 RCLFELA-----PER---------------------------------DVILWNTIVSGY 207
R E+ PE+ D ++ N ++ Y
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMY 471
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ ARK+FD+M K+ ++SWNTM I
Sbjct: 472 AKCGKIDTARKVFDRMHKRGIVSWNTM-------------------------------II 500
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGY 326
Y +G+ E L F M +EG + P+D T + ++SAC+ G + K W + + G
Sbjct: 501 AYGIHGIGLEALLLFDNMQSEG-LKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGI 559
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISG 370
+ ++D+ ++ G+ + M + D+ W ++S
Sbjct: 560 IPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA 604
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 336 LIDMYAKCGIIENAVDVFNSMD--TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
L+D+Y C ++ A VF+ M K+++ WN +I A +G A+ L+++M G
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 394 PDGITFIGILCACTHMGLVEEGLSY---FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
P+ TF +L AC+ + EG + + ++ ++ +VD A+ G L +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTA----LVDFYAKCGCLDD 172
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNV--ELAELALERLTELEPKN 497
A + +M + D V W +++ +++ E+A L ++ ++ P +
Sbjct: 173 AKEVFDKMH-KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNS 220
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/576 (34%), Positives = 326/576 (56%), Gaps = 47/576 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT-------YARKMFDK--ITDQ 63
+T+ L+++ +++T+GL K+ +T RI+ A A + +AR +F + ++
Sbjct: 6 KTSHDLNKLHARLITTGLIKNPDLTTRIVLAFASASASSRRPFLAEFARCVFHEHHVSSS 65
Query: 64 NVVS----WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
V WN + ++ R + L M + + F+ + LK+C ++ ++EG
Sbjct: 66 GEVEDPFLWNVVIKSHSHGVDPRKALFLLCLMLESSVPVDKFSLSLALKACSRLGFVKEG 125
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
++H ++K G +++F+ LI LY + A +VF M ER+ V + SMI+GY+ C
Sbjct: 126 TQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKC 185
Query: 180 GDIVSARCLFELAP--ERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLS 236
G + SA LF+L P +R++I WN+++ GY + ++ A KLFD+MP+KD+ISWN+M+
Sbjct: 186 GLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEMPEKDLISWNSMIG 245
Query: 237 GYANNGDVEECKRLFEEMPERNVFSW-------------------------------NGL 265
GY +G +E+ K LF MP R+V +W N +
Sbjct: 246 GYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSM 305
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
+ GY N E L+ F M E + P++ ++V VLSA A+LG L + +H+Y
Sbjct: 306 MSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQ 365
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ + +G ALIDMY+KCG I++A+ VF +++K + WN +I GLA+HG G A +
Sbjct: 366 FPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLF 425
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+LAR+
Sbjct: 426 QIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARS 485
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G + A + ++ MPIE + VIW L +C +K E EL + L NP+++V+LS
Sbjct: 486 GSIKLARNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILXGGYNPSSYVLLS 545
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
N+Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 546 NMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELD 581
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 308/532 (57%), Gaps = 13/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + ++ +G E + ++ A+ R++F+K+ ++++++WN M G A+
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN 426
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++ QM++ MPN T+ I+L +CV AL G E+H V+K+GF +I V A
Sbjct: 427 WEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNA 486
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE 194
LI +Y+ +I+ A +F +M ++++ WT+MI G G A +F+ L P
Sbjct: 487 LISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPN 546
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRL 250
R + + +I++ + R++ Q+ + D NT+++ Y+ G V++ +++
Sbjct: 547 R--VTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ M +R++ ++N +IGGYA + L E L F R+ EG + P+ T + +L+ACA G+
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG-LKPDKVTYINMLNACANSGS 663
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+++K +H +GY + +GNAL+ YAKCG +A+ VF+ M +++I+WN II G
Sbjct: 664 LEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGG 723
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HGRG L LF MK G PD +TF+ +L AC+H GL+EEG YF SM+ D+ I P
Sbjct: 724 CAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITP 783
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
IEHYGCMVDLL RAG+L E +K MP +A+ IW LLG+CR++ NV +AE A E
Sbjct: 784 TIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESS 843
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+L+P N A +V LS++Y G W A+++ M G K PG S IEV +
Sbjct: 844 LKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGD 895
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 266/543 (48%), Gaps = 27/543 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
I+ A+ + AR++FDK+ ++VVSW + GYA +F +M++ +PN
Sbjct: 285 ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPN 344
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ VL + AL+ G+ +H +L G +++ VGTAL+++Y+ + + +VF
Sbjct: 345 RITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFE 404
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI-----VSGYIDVRNMI 214
++ R+++ W +MI G G+ A ++ +R+ ++ N I ++ ++ +
Sbjct: 405 KLVNRDLIAWNTMIGGLAEGGNWEEASEIYH-QMQREGMMPNKITYVILLNACVNPTALH 463
Query: 215 EARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
R++ ++ K D+ N ++S YA G +++ + LF +M +++ SW +IGG A
Sbjct: 464 WGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLA 523
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+GL E L F+ M G + PN T ++L+AC+ ALD+ + +H G +
Sbjct: 524 KSGLGAEALAVFQDMQQAG-LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDA 582
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N L++MY+ CG +++A VF+ M +D++ +N +I G A H G AL LF ++
Sbjct: 583 HVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEE 642
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD +T+I +L AC + G +E S+ + + +V A+ G ++
Sbjct: 643 GLKPDKVTYINMLNACANSGSLEWA-KEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSD 701
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP--ANFVMLSNIY 508
A+ +M ++ + + W ++G C + + ER+ ++E P FV L +
Sbjct: 702 ALLVFDKM-MKRNVISWNAIIGGCAQHGRGQDVLQLFERM-KMEGIKPDIVTFVSLLSAC 759
Query: 509 GDLGRWKDVARIKVAM-RDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIK 567
G ++ R +M RD G +IE GC+ L R + +IK
Sbjct: 760 SHAGLLEEGRRYFCSMSRDFGIT-----PTIE-----HYGCMVDLLGRAGQLDEVEALIK 809
Query: 568 LLP 570
+P
Sbjct: 810 TMP 812
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 247/504 (49%), Gaps = 26/504 (5%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVSWNAMFNG 74
H H IQ V Y +I Q + AR++++K+ T++ V SWNAM G
Sbjct: 164 HEHIIQHCTVLD-----QYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVG 218
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y Q + + L +M++ T +L SC +AL G E+H +K +
Sbjct: 219 YVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFD 278
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ V ++ +Y+ +I A +VF +M+ ++VV WT +I GY CG A +F+ +
Sbjct: 279 VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQ 338
Query: 195 RDVILWNTIVSGYIDVRNMIEA-----------RKLFDQMPKKDVISWNTMLSGYANNGD 243
V+ N I YI+V N + + + D+ ++ YA G
Sbjct: 339 EGVVP-NRIT--YINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGS 395
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
++C+++FE++ R++ +WN +IGG A G + E + + +M EG + PN T V +L+
Sbjct: 396 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREG-MMPNKITYVILLN 454
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
AC AL + + +H +G+ ++ V NALI MYA+CG I++A +FN M KD+I+
Sbjct: 455 ACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIIS 514
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W +I GLA G GA AL++F +M+ AG P+ +T+ IL AC+ ++ G Q +
Sbjct: 515 WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV- 573
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
++ + +V++ + G + +A RM + D V + ++G + + A
Sbjct: 574 IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM-TQRDIVAYNAMIGGYAAHNLGKEA 632
Query: 484 ELALERLTE--LEPKNPANFVMLS 505
+RL E L+P ML+
Sbjct: 633 LKLFDRLQEEGLKPDKVTYINMLN 656
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 208/428 (48%), Gaps = 37/428 (8%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+++ A N + +LK C+++ L G E+H ++++ + + ALI +Y +
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGS 191
Query: 151 IEAAYKVFGEMD--ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV---- 204
IE A +V+ +++ ER V W +M+ GY+ G I A L + + L
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 205 -----------SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
I V M +AR LFD V N +L+ YA G + E + +F++
Sbjct: 252 SSCKSPSALECGREIHVEAM-KARLLFD------VNVANCILNMYAKCGSIHEAREVFDK 304
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
M ++V SW +IGGYA+ G + F++M EG V PN T + VL+A + AL +
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG-VVPNRITYINVLNAFSGPAALKW 363
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K VH + G++ ++ VG AL+ MYAKCG ++ VF + +DLI WNT+I GLA
Sbjct: 364 GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 423
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
G A ++H+M+ G MP+ IT++ +L AC + + G + D + I
Sbjct: 424 GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD-GFMFDIS 482
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG----------SCRVYKNVELA 483
++ + AR G + +A +M + D + W ++G + V+++++ A
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 484 ELALERLT 491
L R+T
Sbjct: 542 GLKPNRVT 549
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 179/366 (48%), Gaps = 11/366 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++VV G + +I+ A+ + AR +F+K+ ++++SW AM G A++
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSG 526
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F M++ PN T+ +L +C AL G +H V++ G + V
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
L+ +YS +++ A +VF M +R++V + +MI GY + A LF+ E
Sbjct: 587 TLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP 646
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLF 251
D + + +++ + ++ A+++ + K +S N ++S YA G + +F
Sbjct: 647 DKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVF 706
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
++M +RNV SWN +IGG A +G +VL F+RM EG + P+ T V++LSAC+ G L
Sbjct: 707 DKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEG-IKPDIVTFVSLLSACSHAGLL 765
Query: 312 DFSKWVHVYAEYN-GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIIS 369
+ + + G + ++D+ + G ++ + +M + + W ++
Sbjct: 766 EEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLG 825
Query: 370 GLAMHG 375
+HG
Sbjct: 826 ACRIHG 831
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 145/294 (49%), Gaps = 13/294 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I QV+ +GL ++ ++ + + AR++FD++T +++V++NAM GYA +
Sbjct: 568 RIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF ++++ P+ T+ +L +C +L +E+H LVLK+G+ ++ +G
Sbjct: 628 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN 687
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ER 195
AL+ Y+ + A VF +M +RNV+ W ++I G G LFE +
Sbjct: 688 ALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKP 747
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRL 250
D++ + +++S + E R+ F M + I+ + M+ G ++E + L
Sbjct: 748 DIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEAL 807
Query: 251 FEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ MP + N W L+G +G V A + + ++ P++A + LS
Sbjct: 808 IKTMPFQANTRIWGALLGACRIHG---NVPVAERAAESSLKLDPDNAAVYVALS 858
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 306/544 (56%), Gaps = 39/544 (7%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLK---QMTYARKMFDKITDQNVVSWNAMFNG 74
L QI Q++ + L + R+I C+ + YA +F +I N + A+ G
Sbjct: 22 LRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKG 81
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNC--FTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
++ ++L+ +M + F+ P VLK+C K+ A EG ++H VLK
Sbjct: 82 FSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLW 141
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ FVG SM+ YI G+I AR +F+
Sbjct: 142 FDPFVGN-------------------------------SMVRMYIDFGEIELARRVFDRM 170
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P RDV+ WN++++GY+ + A +LFD+MP++D++S N M+ GY G E +++FE
Sbjct: 171 PNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFE 230
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M +++V +W +I Y N + LD F+ ML+ G + P+ IV+VLSA A LG ++
Sbjct: 231 TMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLG-LRPDGPAIVSVLSAIADLGFVE 289
Query: 313 FSKWVHVYAEYNGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISG 370
KW+H Y N + + +G+ALIDMY+KCG IENA VF S+ +++ WN++ISG
Sbjct: 290 EGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISG 349
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LA+HG AL +F EM+ P+ ITF+G+L C+H GLVEEG YF+SM Y IVP
Sbjct: 350 LAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVP 409
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+I+HYGCM+DL RAGRL +A+ ++ MP EAD + W +L + + ++E+ + A R
Sbjct: 410 RIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRA 469
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
EL P + +++V+LSNIY GRW DVA+I++ MR G KK+ GCSS+ VB V
Sbjct: 470 IELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXG 529
Query: 551 RELD 554
+ELD
Sbjct: 530 KELD 533
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 182/470 (38%), Positives = 289/470 (61%), Gaps = 16/470 (3%)
Query: 125 LVLKNGFRANIFVGTALIELYSTGK----AIEAAYKVFGEMDERNVVVWTSMINGYI--S 178
L+ K N F+ A+I Y K AI ++ G N + ++ S
Sbjct: 67 LLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKS 126
Query: 179 CGDIVSARC-------LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
C ++ +F+ + + ++ N++V Y+ ++ +A ++F++M ++D +SW
Sbjct: 127 CAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSW 186
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
NT++SG+ G + + +FEEM ++ +FSW ++ GYA G + + L+ F+RM G +
Sbjct: 187 NTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVG-I 245
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P++ ++V+VL CA+LGAL+ KW+H+YA+ G+ N+CV NALI+MYAKCG I+
Sbjct: 246 EPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR 305
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M +D+I+W+T+I GLA HGR A+ LF EM+ A P ITF+G+L AC H GL
Sbjct: 306 LFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGL 365
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ EGL YF+SM DY+I P +EHYGC+V+LL +GRL +A++ VK+MP + D+ IW +LL
Sbjct: 366 LNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLL 425
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
SCR + N+++A +A+E L ELEP + N+V+LSN+Y DLG+W V+R++ MR KK
Sbjct: 426 SSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKK 485
Query: 532 LPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVV 581
PGCSSIEV+ +V + D K +A ++KLL + + I+V
Sbjct: 486 TPGCSSIEVDNMVQE--FASGDDSKPFSKAICRVLKLLVMHQSKIIEIMV 533
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 196/405 (48%), Gaps = 49/405 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +I +V L +S ++ +++ C + YA +F + D N +NAM Y
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKH 89
Query: 78 NEFHRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N+ + + ++ QM + P+ FTFP V+KSC + G+++H V K G +
Sbjct: 90 NKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 149
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+N V +L+E+Y +++ A++VF EM ER+ V W ++I+G++ G + AR +FE
Sbjct: 150 SNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEM 209
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS------------------ 230
++ + W IVSGY + +A + F +M + D IS
Sbjct: 210 QDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGK 269
Query: 231 W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
W N ++ YA G +++ +RLF++M ER+V SW+ +I G AN+G
Sbjct: 270 WIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHG 329
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVC 331
E ++ F+ M + ++ P+ T V +L+ACA G L+ + + +YN G
Sbjct: 330 RAREAIELFQEM-QKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEH 388
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
G L+++ G ++ A+++ M K D W +++S HG
Sbjct: 389 YG-CLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHG 432
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 304/535 (56%), Gaps = 51/535 (9%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVSWNA 70
+T + L Q+ Q++ + + ++ +A + + + YARK+F + N S+N
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNT 81
Query: 71 MFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ +++ +++F +M + PNCFTFP V K+C + LREG ++H L +K
Sbjct: 82 LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKF 141
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++ FV + ++ +Y +SCG + A LF
Sbjct: 142 GLDSDEFVVSNVVRMY-------------------------------LSCGVMEDAHRLF 170
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
V G +R+ + R++ DV+ WN M+ GY G++E +
Sbjct: 171 ---------YRRVFVDGCDGIRD--KKRRV-----DGDVVLWNVMIDGYVRIGELEVARN 214
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+EMP+R+V SWN +I GYA +G F E ++ F+ M V PN T+V+VL A +RLG
Sbjct: 215 LFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQM-AEVPPNYVTLVSVLPAMSRLG 273
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL+ KWVH+YA N + +G+ALIDMYAKCG IE A+ VF + ++++TW+TII+
Sbjct: 274 ALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIA 333
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLAMHGR L F +M+ AG MP +T+IG+L AC+H GLV EG +F M +
Sbjct: 334 GLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLE 393
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+IEHYGCMVDLL RAG L E+ + + MPI+ D VIW LLG+C+++ NVE+ + E
Sbjct: 394 PRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEH 453
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L EL P + ++V LSNIY LG W+ VA++++ M++ +K PGCS IE++ V+
Sbjct: 454 LMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVI 508
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 56/326 (17%)
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTML--SGYANNGDVEECKRLFE 252
LW S + + M + ++L QM K +D ++ +L S +++ D++ +++F
Sbjct: 12 LWPP--SSFFPCKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFR 69
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M N FS+N LI + + + L F M+ + V PN T +V AC R L
Sbjct: 70 SMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLR 129
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA---------VD------------ 351
+ VH A G + V + ++ MY CG++E+A VD
Sbjct: 130 EGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRV 189
Query: 352 -------------------------VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+F+ M + +++WN +I+G A G A+ +F E
Sbjct: 190 DGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFRE 249
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M+ A P+ +T + +L A + +G +E G + A+ +I ++D+ A+ G
Sbjct: 250 MQMAEVPPNYVTLVSVLPAMSRLGALELG-KWVHLYAVRNNIGVDDVLGSALIDMYAKCG 308
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLG 472
+ +A+ + +P + + V W+ ++
Sbjct: 309 SIEKALQVFEGLP-KRNVVTWSTIIA 333
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 317/571 (55%), Gaps = 43/571 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRI-ITACAQLK-QMTYARKMFDKITDQNVVSWNA 70
+TT Q+ +Q +T G+ + ++ + C++L ++YA K+F KI + +VV WN
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNN 104
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKN 129
M G+++ + V L+ M K P+ TFP +L + AL G++LHC V+K
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD-------- 181
G +N++V AL+++YS ++ A VF + +V W MI+GY +
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 182 ----------------IVSARC---------------LFELAPERDVILWNTIVSGYIDV 210
+V + C + E E + L N +V+ Y
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
M A ++F M +DVISW +++ GY G+++ + F++MP R+ SW +I GY
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G F E L+ F+ M + G + P++ T+V+VL+ACA LG+L+ +W+ Y + N + +V
Sbjct: 345 RAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
VGNALIDMY KCG E A VF+ MD +D TW ++ GLA +G+G A+ +F +M++
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD IT++G+L AC H G+V++ +F M D+ I P + HYGCMVD+L RAG + E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A + +++MP+ ++++W LLG+ R++ + +AELA +++ ELEP N A + +L NIY
Sbjct: 524 AYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAG 583
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RWKD+ ++ + D KK PG S IEVN
Sbjct: 584 CKRWKDLREVRRKIVDVAIKKTPGFSLIEVN 614
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 302/501 (60%), Gaps = 9/501 (1%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSC 110
YA +F +V++WN+M + + R + +T+M ++ +P+ FTFP +LK C
Sbjct: 30 YAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ + G+ LH V+K +++++ T L+ +Y+ +++A +F M RN VVWT
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 171 SMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
SMI+GY+ A L++ E D + T+VS +++++ KL + +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209
Query: 227 DV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
D+ + + +++ YA GD++ +++F+++ +++V++W+ LI GY N E L F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ + + PN+ TI+ V+SACA+LG L+ +WVH Y +V + N+LIDM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG I+ A +F+SM KDLI+WN++++GLA+HG G AL+ FH M+ PD ITFIG+
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGV 389
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+H GLV+EG F + Y + + EHYGCMVDLL RAG LAEA +F++ MP++
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQP 449
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
D IW ++LG+CRVY N+EL E A L ELEP N +++LSNIY W +V +++
Sbjct: 450 DGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRE 509
Query: 523 AMRDTGFKKLPGCSSIEVNEV 543
M + G +K PGCSS+ ++ +
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNI 530
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 174/362 (48%), Gaps = 18/362 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ QVV L YI ++ A + AR +F+++ +N V W +M +GY +N
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++L+ +M++ P+ T ++ +C ++ L G +LH + + + +G+A
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-------LAP 193
L+ +Y+ ++ A +VF ++ +++V W+++I GY+ A LF + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
IL ++S + ++ R + D + + V N+++ ++ GD++ KR
Sbjct: 281 NEVTIL--AVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ M +++ SWN ++ G A +GL E L F M T + P++ T + VL+AC+ G
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTD-LQPDEITFIGVLTACSHAG 397
Query: 310 ALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNT 366
+ K + + A Y + G ++D+ + G++ A + M + D W +
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYG-CMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 367 II 368
++
Sbjct: 457 ML 458
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 309/532 (58%), Gaps = 13/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ ++++ +G E + ++ A+ R++F+K+ ++++++WN M G A+ +
Sbjct: 249 VHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGY 308
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++ QM++ MPN T+ I+L +CV AL G+E+H V K GF ++I V A
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNA 368
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE 194
LI +YS +I+ A VF +M ++V+ WT+MI G G A +++ + P
Sbjct: 369 LISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPN 428
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRL 250
R + + +I++ + R++ Q+ + D NT+++ Y+ G V++ +++
Sbjct: 429 R--VTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ M +R++ ++N +IGGYA + L E L F R+ EG + P+ T + +L+ACA G+
Sbjct: 487 FDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEG-LKPDKVTYINMLNACANSGS 545
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L++++ +H G+ + VGNAL+ YAKCG +A VF M +++I+WN II G
Sbjct: 546 LEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGG 605
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HGRG AL LF MK G PD +TF+ +L AC+H GL+EEG YF SM+ D++I+P
Sbjct: 606 SAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIP 665
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
IEHYGCMVDLL RAG+L EA +K MP +A+ IW LLG+CR++ NV +AE A E
Sbjct: 666 TIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESS 725
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+L+ N +V LS++Y G W A+++ M G K PG S I+V +
Sbjct: 726 LKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGD 777
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 262/528 (49%), Gaps = 27/528 (5%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNG 74
H H IQ + V Y +I Q + AR+++ K++ ++ V SWNAM G
Sbjct: 46 HQHIIQHRTVPD-----QYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVG 100
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y Q + + L QM++ P+ T L SC AL G E+H ++ G +
Sbjct: 101 YIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFD 160
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ V ++ +Y+ +IE A +VF +M++++VV WT I GY CG +A +F+ E
Sbjct: 161 VKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ-KME 219
Query: 195 RDVILWNTIVSGYIDVRNMIEA-----------RKLFDQMPKKDVISWNTMLSGYANNGD 243
++ ++ N I YI V N + ++ + + D ++ YA G
Sbjct: 220 QEGVVPNRIT--YISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGS 277
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
++C+++FE++ R++ +WN +IGG A G + E + + +M EG V PN T V +L+
Sbjct: 278 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG-VMPNKITYVILLN 336
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
AC AL + K +H G+ ++ V NALI MY++CG I++A VF+ M KD+I+
Sbjct: 337 ACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS 396
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W +I GLA G GA AL+++ EM+ AG P+ +T+ IL AC+ +E G Q +
Sbjct: 397 WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV- 455
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
++ + +V++ + G + +A RM I+ D V + ++G + + A
Sbjct: 456 VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEA 514
Query: 484 ELALERLTE--LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
+RL E L+P + ++ + N + G + I +R GF
Sbjct: 515 LKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 241/497 (48%), Gaps = 44/497 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q + +GL + I+ A+ + AR++FDK+ ++VVSW GYA
Sbjct: 147 EIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
T +F +M++ +PN T+ VL + AL+ G+ +H +L G ++ VGT
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL+++Y+ + + +VF ++ R+++ W +MI G G A ++ V
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
I + +++ ++ + +++ ++ K D+ N ++S Y+ G +++ + +F
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVF 386
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
++M ++V SW +IGG A +G E L ++ M G V PN T ++L+AC+ AL
Sbjct: 387 DKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG-VEPNRVTYTSILNACSSPAAL 445
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
++ + +H G + VGN L++MY+ CG +++A VF+ M +D++ +N +I G
Sbjct: 446 EWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGY 505
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG----------LVEEGLSYFQS 421
A H G AL LF ++ G PD +T+I +L AC + G LV +G +F
Sbjct: 506 AAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG-GFFSD 564
Query: 422 MAMDYSIVPQIEHYGCMVDL---------------------LARAGRLAEAVDFVKRMPI 460
++ ++V G D A+ GR +A+ +RM +
Sbjct: 565 TSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKM 624
Query: 461 EA---DAVIWANLLGSC 474
E D V + +LL +C
Sbjct: 625 EGVKPDIVTFVSLLSAC 641
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 209/423 (49%), Gaps = 27/423 (6%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+++ A N + +LK C+++ L G ++H ++++ + + ALI +Y +
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 151 IEAAYKVFGEMD--ERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNT 202
IE A +V+ ++ ER V W +M+ GYI G I A L LAP+R I+ +
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIM--S 131
Query: 203 IVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
+S + R++ Q + DV N +L+ YA G +EE + +F++M +++
Sbjct: 132 FLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKS 191
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
V SW IGGYA+ G + F++M EG V PN T ++VL+A + AL + K VH
Sbjct: 192 VVSWTITIGGYADCGRSETAFEIFQKMEQEG-VVPNRITYISVLNAFSSPAALKWGKAVH 250
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
G++ + VG AL+ MYAKCG ++ VF + +DLI WNT+I GLA G
Sbjct: 251 SRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWE 310
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
A ++++M+ G MP+ IT++ +L AC + + G S I +
Sbjct: 311 EASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG-KEIHSRVAKAGFTSDIGVQNAL 369
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG----------SCRVYKNVELAELALE 488
+ + +R G + +A +M + D + W ++G + VY+ ++ A +
Sbjct: 370 ISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPN 428
Query: 489 RLT 491
R+T
Sbjct: 429 RVT 431
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 182/370 (49%), Gaps = 19/370 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++V +G + +I+ ++ + AR +FDK+ ++V+SW AM G A++
Sbjct: 349 EIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSG 408
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + ++ +M++ PN T+ +L +C AL G +H V++ G + VG
Sbjct: 409 FGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN 468
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
L+ +YS +++ A +VF M +R++V + +MI GY + A LF+ E
Sbjct: 469 TLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP 528
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
D + + +++ + ++ AR++ + K D N ++S YA G + +F
Sbjct: 529 DKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVF 588
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E+M +RNV SWN +IGG A +G + L F+RM EG V P+ T V++LSAC+ G L
Sbjct: 589 EKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEG-VKPDIVTFVSLLSACSHAGLL 647
Query: 312 D-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWN 365
+ F +A + C ++D+ + G ++ A + +M + + W
Sbjct: 648 EEGRRYFCSMSQDFAIIPTIEHYGC----MVDLLGRAGQLDEAEALIKTMPFQANTRIWG 703
Query: 366 TIISGLAMHG 375
++ +HG
Sbjct: 704 ALLGACRIHG 713
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 13/266 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + +HQ QVV +GL ++ ++ + + AR++FD++ +++V++NAM
Sbjct: 445 LEWGRRIHQ---QVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAM 501
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYA + + + LF ++++ P+ T+ +L +C +L E+H LV K GF
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++ VG AL+ Y+ + A VF +M +RNV+ W ++I G G A LFE
Sbjct: 562 FSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFER 621
Query: 192 AP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNG 242
+ D++ + +++S + E R+ F M + I + M+ G
Sbjct: 622 MKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAG 681
Query: 243 DVEECKRLFEEMP-ERNVFSWNGLIG 267
++E + L + MP + N W L+G
Sbjct: 682 QLDEAEALIKTMPFQANTRIWGALLG 707
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 317/571 (55%), Gaps = 43/571 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRI-ITACAQLK-QMTYARKMFDKITDQNVVSWNA 70
+TT Q+ +Q +T G+ + ++ + C++L ++YA K+F KI + +VV WN
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNN 104
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKN 129
M G+++ + V L+ M K P+ TFP +L + AL G++LHC V+K
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD-------- 181
G +N++V AL+++YS ++ A VF + +V W MI+GY +
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 182 ----------------IVSARC---------------LFELAPERDVILWNTIVSGYIDV 210
+V + C + E E + L N +V+ Y
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
M A ++F M +DVISW +++ GY G+++ + F++MP R+ SW +I GY
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G F E L+ F+ M + G + P++ T+V+VL+ACA LG+L+ +W+ Y + N + +V
Sbjct: 345 RAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
VGNALIDMY KCG E A VF+ MD +D TW ++ GLA +G+G A+ +F +M++
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD IT++G+L AC H G+V++ +F M D+ I P + HYGCMVD+L RAG + E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A + +++MP+ ++++W LLG+ R++ + +AELA +++ ELEP N A + +L NIY
Sbjct: 524 AYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAG 583
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RWKD+ ++ + D KK PG S IEVN
Sbjct: 584 CKRWKDLREVRRKIVDVAIKKTPGFSLIEVN 614
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 196/531 (36%), Positives = 296/531 (55%), Gaps = 41/531 (7%)
Query: 18 LHQIQTQVVTSGLEKS-DYITPRIITAC-------AQLKQMTYARKMFDKITDQNVVSWN 69
L QI ++ +GL + ++ ++T A + YA +MF +I + WN
Sbjct: 17 LKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWN 76
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
G +Q+ V L+ QM + P+ FTFP VLK+C K+ + G +H VL+
Sbjct: 77 TYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRL 136
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +N+ V L+ ++ CGD+ A +F
Sbjct: 137 GFGSNVVVRNTLLVFHA-------------------------------KCGDLKVATDIF 165
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ + + DV+ W+ +++GY ++ ARKLFD+MPK+D++SWN M++ Y +G++E +R
Sbjct: 166 DDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARR 225
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+E P +++ SWN LIGGY L E L+ F M G P++ T++++LSACA LG
Sbjct: 226 LFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGEC-PDEVTMLSLLSACADLG 284
Query: 310 ALDFSKWVHV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
L+ + VH E N + + +GNAL+DMYAKCG I AV VF + KD+++WN++I
Sbjct: 285 DLESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVI 344
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SGLA HG +L LF EMK PD +TF+G+L AC+H G V+EG YF M Y I
Sbjct: 345 SGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKI 404
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P I H GC+VD+L RAG L EA +F+ M IE +A++W +LLG+C+V+ +VELA+ A E
Sbjct: 405 EPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANE 464
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+L + ++V+LSN+Y G W ++ M D G K G S +E
Sbjct: 465 QLLRMRGDQSGDYVLLSNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 200/578 (34%), Positives = 324/578 (56%), Gaps = 49/578 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK------ITDQNVV 66
+T+ L+++ +++T+GL K+ +T RI+ A A +R+ F + +V
Sbjct: 26 KTSHDLNKLHARLITTGLIKNPDLTTRIVLAFASASASASSRRPFLAEFARCVFHEHHVS 85
Query: 67 S---------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR 117
S WN + ++ R + L M + + F+F + LK+C ++ ++
Sbjct: 86 SSGEVEDPFLWNVVIKSHSHGVDPRKALFLLCLMLENGVPVDKFSFSLALKACSRLGFVK 145
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
EG ++H ++K G +++F+ LI LY + A +VF M +R+ V + SMI+GY+
Sbjct: 146 EGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYL 205
Query: 178 SCGDIVSARCLFELAP--ERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTM 234
CG + SA LF L P +R++I WN+++ GY + + A KLFD+MP+KD+ISWN+M
Sbjct: 206 KCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLISWNSM 265
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL-------------------- 274
+ GY +G +E+ K LF+ MP R+V +W +I GY GL
Sbjct: 266 IGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYN 325
Query: 275 -----------FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
E L+ F M E + P++ ++V VLSA A+LG L + +H+Y
Sbjct: 326 SMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMHLYIVE 385
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ + +G ALIDMY+KCG I++A+ VF +++K + WN +I GLA+HG G A +
Sbjct: 386 KQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDM 445
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
+++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+LA
Sbjct: 446 LLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILA 505
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
R+G + A + ++ MPIE + VIW L +C +K E EL + L NP+++V+
Sbjct: 506 RSGSIELAKNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL 565
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LSN+Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 566 LSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELD 603
>gi|225430506|ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 517
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/481 (38%), Positives = 282/481 (58%), Gaps = 2/481 (0%)
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
D + WN + ++ + +MK++ + FTFP++LK+ +++ G
Sbjct: 16 DSGLQRWNKVIKRRVSQGNPDQAILAYVEMKRVGFDADNFTFPVLLKAASSLSSCCIGFA 75
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
LH +K GF + FVGTAL+++YS AI+ A KVF EM ++VVVW SM+ Y SCG
Sbjct: 76 LHGQAMKTGFSGHCFVGTALLDMYSAFGAIDHATKVFEEMGVKDVVVWNSMLAAYASCGQ 135
Query: 182 IVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+ +A LF+ P +D+ +N ++SGY + AR +FD++ KD++SWN+M+ N
Sbjct: 136 MDNAMKLFDNMPLKDLASFNIMISGYAKIGKKAAARSIFDRIHAKDIVSWNSMILACTNV 195
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
GD+ + LF+ MP++NV +WN +I GY + L+ E +D F M G + T+ V
Sbjct: 196 GDMGNARNLFDVMPKKNVITWNTMISGYLHAQLYAEAVDLFDEM-KAGNHEADHLTVTLV 254
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LSACA LG L +HVYA+ + + V +LIDMYAKCG I+ +++VF KD+
Sbjct: 255 LSACAHLGWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDI 314
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
WN IISGLA+HG G A+ L +M++ G PD ITFIG+L AC+H LV+EG F
Sbjct: 315 YCWNAIISGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGLLSACSHRSLVQEGCRLFDC 374
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M ++ + P++EHYGCMVDLL RAG L A +K MP E I LLG+C +++++E
Sbjct: 375 MEKEFGLPPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLE 434
Query: 482 LAELALERLT-ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
E + +T + + F+M N+Y G+WK+ R + M ++G K G S+IEV
Sbjct: 435 TGEKVINLITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEV 494
Query: 541 N 541
+
Sbjct: 495 D 495
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 79/326 (24%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q + +G ++ ++ + + +A K+F+++ ++VV WN+M YA
Sbjct: 76 LHGQAMKTGFSGHCFVGTALLDMYSAFGAIDHATKVFEEMGVKDVVVWNSMLAAYA---- 131
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + MK D MP LK N + G
Sbjct: 132 --SCGQMDNAMKLFDNMP--------LKDLASFNIMISG--------------------- 160
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
Y+ AA +F + +++V W SMI + GD+ +AR LF++ P+++VI W
Sbjct: 161 ----YAKIGKKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNARNLFDVMPKKNVITW 216
Query: 201 NTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSG------------------- 237
NT++SGY+ + EA LFD+M + D ++ +LS
Sbjct: 217 NTMISGYLHAQLYAEAVDLFDEMKAGNHEADHLTVTLVLSACAHLGWLGKGTEMHVYAQD 276
Query: 238 ----------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
YA G ++ +F + ++++ WN +I G A +G +
Sbjct: 277 HRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDIYCWNAIISGLALHGYGHAAVKL 336
Query: 282 FKRMLTEGRVFPNDATIVTVLSACAR 307
+M G V P++ T + +LSAC+
Sbjct: 337 LDKMRDNG-VRPDEITFIGLLSACSH 361
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 35/253 (13%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ-----------NEFHRTVVVLF 88
++ A A QM A K+FD + +++ S+N M +GYA+ + H +V +
Sbjct: 126 MLAAYASCGQMDNAMKLFDNMPLKDLASFNIMISGYAKIGKKAAARSIFDRIHAKDIVSW 185
Query: 89 TQM--------------KKLDAMP--NCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
M D MP N T+ ++ + E +L +
Sbjct: 186 NSMILACTNVGDMGNARNLFDVMPKKNVITWNTMISGYLHAQLYAEAVDLFDEMKAGNHE 245
Query: 133 AN----IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
A+ V +A L GK E + V TS+I+ Y CG I + +
Sbjct: 246 ADHLTVTLVLSACAHLGWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEV 305
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDV 244
F + +D+ WN I+SG A KL D+M + D I++ +LS ++ V
Sbjct: 306 FYKSQVKDIYCWNAIISGLALHGYGHAAVKLLDKMRDNGVRPDEITFIGLLSACSHRSLV 365
Query: 245 EECKRLFEEMPER 257
+E RLF+ M +
Sbjct: 366 QEGCRLFDCMEKE 378
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 306/577 (53%), Gaps = 78/577 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ T L QI Q++ + L + +I+ CA + YAR +F++I + +
Sbjct: 48 EKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFT 107
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
N++ GY R + LF Q+ L + P+ FTFP + KSC L EG++LHC
Sbjct: 108 CNSIIRGYTNKNLPRQAI-LFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHS 163
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
K GF ++ ++ L+ +YS +CG +VSAR
Sbjct: 164 TKLGFASDAYIQNTLMNMYS-------------------------------NCGCLVSAR 192
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNG 242
+F+ + V+ W T++ Y EA KLF +M K + I+ +L+ A +
Sbjct: 193 KVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSR 252
Query: 243 DVEECKR-----------------------------------LFEEMPERNVFSWNGLIG 267
D+E K+ LF +MPE+N+F WN +I
Sbjct: 253 DLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMIN 312
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ + + E L F M G V + T+ ++L AC LGAL+ KW+HVY E +
Sbjct: 313 GHVEDSDYEEALSLFNEMQLSG-VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIE 371
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+V +G AL+DMYAKCG IE+A+ VF M KD++TW +I GLAM G+G AL LFHEM
Sbjct: 372 VDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM 431
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ + PD ITF+G+L AC+H GLV EG++YF SM Y I P IEHYGCMVD+L RAGR
Sbjct: 432 QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGR 491
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+AEA D ++ MP+ D + LL +CR++ N+ +AE A ++L EL+PKN +V+LSNI
Sbjct: 492 IAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNI 551
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y + W+ +++ M + KK PGCS+IEV VV
Sbjct: 552 YSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVV 588
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 297/574 (51%), Gaps = 48/574 (8%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + +H I V G+E + +IT ++ +++ A ++F K+T++NVVSW A+
Sbjct: 173 LEKGRKIHTI---VKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAI 229
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
AQ+ L+ QM + PN TF +L SC AL G +H + + G
Sbjct: 230 IQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 289
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG--DIVSARCLF 189
++ V ALI +Y +++ A ++F M +R+V+ W++MI GY G D S +F
Sbjct: 290 ETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVF 349
Query: 190 ELAP------------------------------------------ERDVILWNTIVSGY 207
+L E D L I + Y
Sbjct: 350 QLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMY 409
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ EA ++F +M K+V++W + LS Y GD+ +++F EMP RNV SWN +I
Sbjct: 410 AKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIA 469
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GYA NG +V + M EG P+ T++T+L AC L L+ K VH A G +
Sbjct: 470 GYAQNGDIVKVFELLSSMKAEG-FQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLE 528
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ V +LI MY+KCG + A VF+ M +D + WN +++G HG G A+ LF M
Sbjct: 529 SDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRM 588
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
P+ IT ++ AC+ GLV+EG F+ M D+ + P+ +HYGCMVDLL RAGR
Sbjct: 589 LKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGR 648
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA +F++ MP E D +W LLG+C+ + NV+LAE A + ELEP + ++ LSNI
Sbjct: 649 LQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNI 708
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
Y GRW D +++ M D G KK G SSIE++
Sbjct: 709 YAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEID 742
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 237/536 (44%), Gaps = 102/536 (19%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + + E K +H+ Q+ G+E Y+ +I ++ + + A ++F ++T ++VV
Sbjct: 67 AKARRFEDGKMVHK---QLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVV 123
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+W++M YA N F +M + PN TF +LK+C + L +G ++H +V
Sbjct: 124 TWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIV 183
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
G ++ V TALI +YS I A +VF +M ERNVV WT++I + A
Sbjct: 184 KAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAF 243
Query: 187 CLFE------LAP---------------------------------ERDVILWNTIVSGY 207
L+E ++P E D+I+ N +++ Y
Sbjct: 244 ELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMY 303
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ EAR++FD+M K+DVISW+ M++GYA +
Sbjct: 304 CKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS-------------------------- 337
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY + EV +RM EG VFPN T +++L AC GAL+ + +H G++
Sbjct: 338 GYKDKESIDEVFQLLERMRREG-VFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396
Query: 328 GNVCVGNALIDMYAKCGII-------------------------------ENAVDVFNSM 356
+ + A+ +MYAKCG I +A VF+ M
Sbjct: 397 LDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEM 456
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
T+++++WN +I+G A +G L MK G PD +T I IL AC + +E G
Sbjct: 457 PTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG- 515
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ A+ + ++ + ++ G++AEA +M D V W +L
Sbjct: 516 KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLA 570
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 235/500 (47%), Gaps = 33/500 (6%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
R + L +K+ + N T+ V++ C K +G+ +H + + G +I++G +L
Sbjct: 38 REAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSL 97
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---- 197
I YS + + +A +VF M R+VV W+SMI Y A FE + ++
Sbjct: 98 INFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNR 157
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEE 253
I + +I+ + + + RK+ + + DV +++ Y+ G++ +F +
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
M ERNV SW +I A + E + +++ML G + PN T V++L++C AL+
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG-ISPNAVTFVSLLNSCNTPEALNR 276
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ +H + G + ++ V NALI MY KC ++ A ++F+ M +D+I+W+ +I+G A
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 374 HGRGAG-----ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA----- 423
G L M+ G P+ +TF+ IL ACT G +E+G ++
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+D S+ I ++ A+ G + EA +M + V W + L +Y
Sbjct: 397 LDRSLQTAI------FNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLS---MYIKCGDL 446
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
A + +E+ +N ++ ++ Y G V + +M+ GF+ P ++ + +
Sbjct: 447 SSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ--PDRVTV-ITIL 503
Query: 544 VMLGCLSRELDRKSIVRAEA 563
G L+ L+R +V AEA
Sbjct: 504 EACGALA-GLERGKLVHAEA 522
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 288/517 (55%), Gaps = 40/517 (7%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+M A K FD++ +++VSWN M GY + + LF + PN ++ +L
Sbjct: 182 EMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPS----PNVVSWVTLLN 237
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+ + E EL + N+ ++ Y +E AYK+F EM ++N +
Sbjct: 238 GYCRAGRIGEARELFDRIPDR----NVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSIS 293
Query: 169 WTSMI-------------------------------NGYISCGDIVSARCLFELAPERDV 197
WT+MI +GY+ I AR +F+ RD
Sbjct: 294 WTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDA 353
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ WNT++SGY+ + EA LF QMP KD++SWNTM++GYA++G + + +F +M +R
Sbjct: 354 VCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR 413
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
N SWN +I G+ NGL E L F M + + + +T LSACA L AL +
Sbjct: 414 NTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKR-ADWSTYACCLSACADLAALHVGRQF 472
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H +GY G+ GNALI YAKCG I A VF+ M D+++WN +I G A +G G
Sbjct: 473 HSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHG 532
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A+S+F EM++ PD +TF+G+L AC+H GL++EG +F SM DY++ P EHY C
Sbjct: 533 TEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYAC 592
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
MVDLL R+GRL+EA + ++ M ++ +A +W +LG+CRV+KN ELA+LA E+L ELEP
Sbjct: 593 MVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHK 652
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
+N+V+LSNI + G+W + ++V +++ G K PG
Sbjct: 653 TSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 41/412 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--- 96
+++A A+ ++ AR++FD+I +N VSWNAM + + LF M D
Sbjct: 48 MLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSW 107
Query: 97 --MPNCFTFPIVL-------------KSCVKINALREGEELH------CLVLKNGFRANI 135
M +C+ L K NA+ G H +L+ +I
Sbjct: 108 TLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDI 167
Query: 136 FV-GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ L+ L G+ + A K F EM R++V W M+ GY+ GD+ SA LF P
Sbjct: 168 ISWNSVLVGLTRNGEMVRAV-KFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPS 226
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+V+ W T+++GY + EAR+LFD++P ++V +WN MLSGY +EE +LF EM
Sbjct: 227 PNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM 286
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P++N SW +I G E D +M F + A ++ + +D +
Sbjct: 287 PDKNSISWTTMISALVRGGKLQEAKDLLDKM-----PFDSFAAKTALMHGYLQSKMIDDA 341
Query: 315 KWVHVYAEYNGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ + ++G + + N +I Y CG+++ A+ +F M KD+++WNT+I+G A
Sbjct: 342 RLI-----FDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAH 396
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
G+ A+ +F +M + +++ ++ GL E L +F M D
Sbjct: 397 DGQMRKAVGIFRKMNQR----NTVSWNSVISGFVQNGLCVEALQHFVLMRRD 444
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 154/323 (47%), Gaps = 20/323 (6%)
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L L +G+ + AA ++F M RN V + +M++ G I AR LF+ P R+ + W
Sbjct: 18 LTRLARSGQ-LAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSW 76
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNV 259
N +++ D + +AR LFD MP +D SW M+S YA G++ + + MP ++
Sbjct: 77 NAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCT 136
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+N +I GYA +G F + + + M P+ + +VL R G + + V
Sbjct: 137 ACYNAMISGYAKHGRFDDAVALLREMPA-----PDIISWNSVLVGLTRNG--EMVRAVKF 189
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+ E ++ N +++ Y + G +++A +F + + ++++W T+++G GR
Sbjct: 190 FDEMPAR--DMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGE 247
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A LF + + + G L +HM EE F M SI + M+
Sbjct: 248 ARELFDRIPDRNVAAWNVMLSGYL-RLSHM---EEAYKLFTEMPDKNSI-----SWTTMI 298
Query: 440 DLLARAGRLAEAVDFVKRMPIEA 462
L R G+L EA D + +MP ++
Sbjct: 299 SALVRGGKLQEAKDLLDKMPFDS 321
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 147/325 (45%), Gaps = 52/325 (16%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G + +AR LF+ P R+ + +N ++S + +AR+LFD++P+++ +SWN M++ +
Sbjct: 25 GQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACS 84
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
++G V + + LF+ MP R+ FSW ++ YA G DA RM P D
Sbjct: 85 DHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRM-------PGDKC-- 135
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+AC NA+I YAK G ++AV + M
Sbjct: 136 ---TACY---------------------------NAMISGYAKHGRFDDAVALLREMPAP 165
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+I+WN+++ GL +G A+ F EM D +++ +L G V+ F
Sbjct: 166 DIISWNSVLVGLTRNGEMVRAVKFFDEMP----ARDMVSWNLMLEGYVRAGDVDSAAGLF 221
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ P + + +++ RAGR+ EA + R+P + + W +L Y
Sbjct: 222 AGVP-----SPNVVSWVTLLNGYCRAGRIGEARELFDRIP-DRNVAAWNVMLSG---YLR 272
Query: 480 VELAELALERLTELEPKNPANFVML 504
+ E A + TE+ KN ++ +
Sbjct: 273 LSHMEEAYKLFTEMPDKNSISWTTM 297
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A QM A +F K+ +N VSWN++ +G+ QN + F M++ +
Sbjct: 390 MIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRAD 449
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L +C + AL G + H L+ ++G+ + F G ALI Y+ I A +VF
Sbjct: 450 WSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFD 509
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
EM ++V W ++I+GY S G A +F + DV
Sbjct: 510 EMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDV 547
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 151/380 (39%), Gaps = 89/380 (23%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+A + ++ A+ + DK+ + + A+ +GY Q++ ++F ++ DA+
Sbjct: 297 MISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAV-- 354
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
C+ ++ V L E ++ + ++ +I Y+ + A +F
Sbjct: 355 CWN--TMISGYVHCGMLDEA----MVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFR 408
Query: 160 EMDERNVVVWTSMINGYI--------------------------------SCGDIVS--- 184
+M++RN V W S+I+G++ +C D+ +
Sbjct: 409 KMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHV 468
Query: 185 ARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
R L D N ++S Y ++EAR++FD+MP D++SWN ++ GYA+
Sbjct: 469 GRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYAS 528
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
NG E +F EM + + V P++ T V
Sbjct: 529 NGHGTEAISVFREMEDND--------------------------------VRPDEVTFVG 556
Query: 301 VLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
VLSAC+ G +D F+ YA + C ++D+ + G + A ++
Sbjct: 557 VLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYAC----MVDLLGRSGRLSEAFEIIQG 612
Query: 356 MDTK-DLITWNTIISGLAMH 374
M + + W ++ +H
Sbjct: 613 MQVQPNAGVWGAMLGACRVH 632
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 6/182 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q + + SG + +I+A A+ ++ AR++FD++ ++VSWNA+ +GYA N
Sbjct: 471 QFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNG 530
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
+ +F +M+ D P+ TF VL +C + EG + + K+ R
Sbjct: 531 HGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHY 590
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD----IVSARCLFELAP 193
+++L + A+++ M + N VW +M+ + ++A L+EL P
Sbjct: 591 ACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEP 650
Query: 194 ER 195
+
Sbjct: 651 HK 652
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 318/585 (54%), Gaps = 45/585 (7%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFD 58
MK T + + ++ L QIQ + GL++ +++ + + L YA ++F+
Sbjct: 7 MKGTYISLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFN 66
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE 118
I D ++ +N M + ++ R+ + LF Q+++ P+ +T+P VLK I +RE
Sbjct: 67 YIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVRE 126
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
GE++H V+K G + +V + +++Y+ +E +VF EM +R+ V W MI+GY+
Sbjct: 127 GEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVR 186
Query: 179 CGDIVSARCLFE-------------------------------------LAPERDV--IL 199
C A ++ +A E D+ I+
Sbjct: 187 CKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASELDLTTIM 246
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
N ++ Y ++ AR++FD M K+V W +M++GY G +++ + LFE P R++
Sbjct: 247 GNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDI 306
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
W +I GY F E + F M G V P+ +VT+L+ CA+ GAL+ KW+H
Sbjct: 307 VLWTAMINGYVQFNRFEETIALFGEMQIRG-VKPDKFIVVTLLTGCAQSGALEQGKWIHN 365
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
Y + N + + VG ALI+MYAKCG IE + ++FN + KD +W +II GLAM+G+ +
Sbjct: 366 YIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSE 425
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL LF M+ G PD ITF+ +L AC+H GLVEEG F SM+ Y I P +EHYGC +
Sbjct: 426 ALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFI 485
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVI---WANLLGSCRVYKNVELAELALERLTELEPK 496
DLL RAG L EA + VK++P + + +I + LL +CR Y N+++ E L +++
Sbjct: 486 DLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSS 545
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ + +L++IY RW+DV +++ M+D G KK+PG S+IEV+
Sbjct: 546 DSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVD 590
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 314/567 (55%), Gaps = 45/567 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITD--------QNVVSW 68
QI +++ +G ++ +T RI+ A A ++ +AR +F ++ W
Sbjct: 8 QIHARLIKTGFIQNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGEVEDPFLW 67
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NA+ ++ + ++ F M + + F+ +VLK+C ++ ++EG ++H + K
Sbjct: 68 NAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRK 127
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G +++F+ LI LY + A ++F M +R+ V + SMI+GY+ CG I SAR L
Sbjct: 128 TGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSAREL 187
Query: 189 FELAP----------------------------------ERDVILWNTIVSGYIDVRNMI 214
F+L P E+D+I WN+++ GY+ M
Sbjct: 188 FDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRME 247
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+A+ LF MP++DV++W TM+ GYA G V + K LF++MP R+V ++N ++ GY N
Sbjct: 248 DAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKY 307
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E L+ F M + + P++ T+V VLSA A+LG L + ++ Y + +G
Sbjct: 308 HMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIVEKSFPLGGKLGV 367
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALIDM++KCG I+ A+ VF + K + WN +I GLA+HG G A + +++ P
Sbjct: 368 ALIDMHSKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHGHGELAFDMLMQIERCSIKP 427
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ITFIG+L AC+H GLV+EGL F+ M + I P+++HYGC+VD+L+R+G + A
Sbjct: 428 DDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVDILSRSGSIELAKHL 487
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ MP+E + VIW L +CR K E+ EL + L NP+++V+LSN+Y LG W
Sbjct: 488 IEDMPMEPNDVIWRTFLIACRNRKEFEIGELVAKHLILQAGYNPSSYVLLSNMYASLGMW 547
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVN 541
KDV R+++ M+ K+PGCS IE++
Sbjct: 548 KDVRRVRMMMKQRKLHKIPGCSWIELD 574
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 195/444 (43%), Gaps = 90/444 (20%)
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKA---IEAAYKVF----------GEMD 162
+R E++H ++K GF N + T ++ ++ + E A VF GE++
Sbjct: 3 IRRCEQIHARLIKTGFIQNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGEVE 62
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPER--------------------------- 195
+ +W ++I + D A F L E
Sbjct: 63 DP--FLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQ 120
Query: 196 ------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
D+ L N ++ Y+ + AR++FD+MP++D +S+N+M+ GY G
Sbjct: 121 IHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGL 180
Query: 244 VEECKRLFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV-- 299
+ + LF+ MP+ +N+ SWN +I GYA + ++ ++ E P I
Sbjct: 181 IGSARELFDLMPKEMKNLISWNSMISGYAQTS---DGVNIASKLFAE---MPEKDLISWN 234
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+++ + G ++ +K + Y + +V +ID YAK G + A +F+ M +
Sbjct: 235 SLIDGYVKHGRMEDAKDLF----YVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHR 290
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D++ +N++++G + AL +F+ M K++ PD T + +L A +G +
Sbjct: 291 DVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLS----- 345
Query: 419 FQSMAMDYSIVPQIEHYG-----CMVDLLARAGRLAEAVDF---VKRMPIEADAVIWANL 470
++M+M+ IV + G ++D+ ++ G + +A+ +K I+ W +
Sbjct: 346 -KAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDH----WNAM 400
Query: 471 LGSCRVYKNVELAELALERLTELE 494
+G ++ + ELA + L ++E
Sbjct: 401 IGGLAIHGH---GELAFDMLMQIE 421
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 320/567 (56%), Gaps = 45/567 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------TDQNVVSW 68
++ +++T+GL K+ +T RI+ A ++ +AR +F + ++ W
Sbjct: 10 KMHARLITTGLIKNPNLTTRIVLAFVASRRSYLAEFARCVFYEYYLCSFSAGEGEDPYLW 69
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NA+ Y+ R ++LF M + + F+ +VLK+C ++ L+EG ++H + K
Sbjct: 70 NAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHGFLRK 129
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G +++F+ LI LY + A +VF M +R+ V + SMI+GY+ CG + SA L
Sbjct: 130 TGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHKL 189
Query: 189 FELAPE--RDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
F+L P +++I WN+++SGY + + A KLF +MP+KD+ISWN+M++G +G +E
Sbjct: 190 FDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMINGCVKHGRIE 249
Query: 246 ECKRLFEEMPERNVFSW-------------------------------NGLIGGYANNGL 274
+ K LF+ MP R+V +W N ++ GY N
Sbjct: 250 DAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYVQNKY 309
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E L+ F M + + P++ T+V VLSA A+LG L + +HVY + +G
Sbjct: 310 HMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGGKLGV 369
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALIDM++KCG I++A+ VF ++ K + WN +I GLA+HG G A + +++ P
Sbjct: 370 ALIDMHSKCGSIQHAISVFEGIENKSIDHWNAMIGGLAIHGLGELAFDMLMQIERCSIQP 429
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ITFIG+L AC+H GLV+EGL F+ M + I P+++HYGC+VD+L+R+G + A
Sbjct: 430 DXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRSGSIELAKHL 489
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ MP+E + VIW + L +C ++ E EL + L NP+++V+LSN+Y LG W
Sbjct: 490 IEDMPMEPNDVIWRSFLSACSTHEEFETGELVAKHLILQAGYNPSSYVLLSNMYASLGMW 549
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVN 541
KDV R+++ M+ K+PGCS IE++
Sbjct: 550 KDVRRVRMMMKQRKLHKIPGCSWIELD 576
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 320/579 (55%), Gaps = 47/579 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVS 67
+ E+ HL QI ++ GL+ + +I+ C + + YA ++ + +V
Sbjct: 24 QSCESMAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSPCLVM 83
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N M A++E R V+VLF++++K P+ FT P V K+ + + EGE++H V+
Sbjct: 84 YNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKVHGYVV 143
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF A V +++ +Y +E A KVF E+ ER+VV W +I+ Y+ A
Sbjct: 144 KSGFDA--CVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIA 201
Query: 188 LFEL--------APERDVI-------------------------------LWNTIVSGYI 208
+F A E V+ + N ++ Y
Sbjct: 202 VFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMTTKIGNALLDMYC 261
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ +AR +FD+M K+VI W +M+SGYA+NG ++E + LFE P R++ W +I G
Sbjct: 262 KCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMING 321
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y LF E L F++M + R+ P++ +VT+L CA+ GAL+ KW+H Y N
Sbjct: 322 YVQFNLFDEALKLFRKMQIQ-RLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITL 380
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ VG AL+D+YAKCG +E A++VF M +D +W ++I GLA++G + AL F +M+
Sbjct: 381 DRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQME 440
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
AG PD ITFIG+L AC H GLVEEG YF SM Y I P+ EHY C++DLL RAG L
Sbjct: 441 EAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLL 500
Query: 449 AEAVDFVKRMPIEADAVI---WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
EA ++ +PIE+ ++ + +LL +CR Y N++++E RL +E K+ + +L+
Sbjct: 501 DEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLA 560
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++Y RW+DV ++ M++ G +K PGCSSIEVN V+
Sbjct: 561 SVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVL 599
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 27/416 (6%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA---IEAAYKVFGEMD 162
+L+SC + L ++H + + G + N+ T ++ L+ T + I A +V G +
Sbjct: 22 LLQSCESMAHL---TQIHAKIFRVGLQDNMDTLTKIV-LFCTDPSRGSIRYAERVLGFVQ 77
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLF-ELAPE---RDVILWNTIVSGYIDVRNMIEARK 218
+V++ MI + LF EL + D + + ++E K
Sbjct: 78 SPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVVEGEK 137
Query: 219 LFDQMPKK--DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
+ + K D N+++ Y G +E K++F+E+PER+V SWN LI Y + F
Sbjct: 138 VHGYVVKSGFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFE 197
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
+ + F+RM E + ++AT+V+ LSAC+ L + + +H Y + + +GNAL
Sbjct: 198 DAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAE-LEMTTKIGNAL 256
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMY KCG ++ A +F+ M K++I W +++SG A +G A LF + D
Sbjct: 257 LDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFER----SPVRDI 312
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV---D 453
+ + ++ L +E L F+ M + + P ++ A+ G L +
Sbjct: 313 VLWTAMINGYVQFNLFDEALKLFRKMQIQ-RLRPDNFILVTLLKGCAQTGALEQGKWLHG 371
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
++ I D V+ L+ VY E ALE E++ ++ A++ S IYG
Sbjct: 372 YIHENSITLDRVVGTALVD---VYAKCGCVEKALEVFYEMKERDTASWT--SVIYG 422
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/584 (34%), Positives = 313/584 (53%), Gaps = 57/584 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ ++ L QIQ Q+V++GL ++ + R++ CA + K++ Y ++ +I + NV S
Sbjct: 65 ERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFS 124
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCL- 125
WNA GY ++ +L+ +M + P+ T+P++LK C G+ CL
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCC-------GQYSSCLG 177
Query: 126 ------VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
VLK GF +IFV A I + + + AY VF + R++V W SMI G +
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 180 GDIVSARCLF---------------------------------------ELAPERDVILW 200
G + A ++ E E + L
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++ Y+ ++ AR LFD M +K ++SW TM+ GYA G ++ + + ++PE++V
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
WN +I G E L F M + P+ T+V LSAC++LGALD W+H Y
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIR-TIEPDKVTMVNCLSACSQLGALDVGIWIHHY 416
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
E + +V +G AL+DMYAKCG I A+ VF + ++ +TW +I GLA+HG A
Sbjct: 417 IERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDA 476
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
LS F +M + G +PD ITF+G+L AC H GLVEEG YF M+ +++ P+++HY CMVD
Sbjct: 477 LSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVD 536
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG L EA + VK MP+ ADA + L +CRVY NV++ E +L E++P++ N
Sbjct: 537 LLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGN 596
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+L+++Y + WK+ + M D G +K PGCS +E+N +V
Sbjct: 597 YVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIV 640
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 55/388 (14%)
Query: 191 LAPERDVILWNT---------IVSGYIDVRNMIEARKLFDQMPKKDVI------SWNTML 235
L+P I WNT ++S +++++ +++ QM +I S
Sbjct: 39 LSPITKTINWNTTHSFVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAF 98
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ + +++ C R+ + E NVFSWN I GY +G +KRML G + P++
Sbjct: 99 CALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDN 158
Query: 296 ATIVTVL-------SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
T +L S+C LG L HV G++ ++ V NA I M CG +
Sbjct: 159 HTYPLLLKGCCGQYSSCLGLGVLG-----HVLK--FGFECDIFVHNASITMLLSCGELSV 211
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A DVFN +DL+TWN++I+G G A+ ++ EM+ P+ IT IG++ +C+
Sbjct: 212 AYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQ 271
Query: 409 ---MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
+ L +E Y + ++++ I ++D+ + G L A M + V
Sbjct: 272 VQDLNLGKEFHCYIKEHGLEFT----IPLTNALMDMYVKCGELLTARVLFDNMA-QKTLV 326
Query: 466 IWANL-LGSCRVYKNVELAELALERLTELEPKN--PANFVMLSNIYGDLGRWKDVARIKV 522
W + LG Y ++A E L ++ K+ P N ++ + G+ ++
Sbjct: 327 SWTTMVLG----YARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 523 AMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
+R +IE ++V M+ CLS
Sbjct: 383 QIR-----------TIEPDKVTMVNCLS 399
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/533 (36%), Positives = 304/533 (57%), Gaps = 15/533 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ S +E++ ++ ++ + ++ AR +FD + ++ SWNAM GY +++
Sbjct: 49 QVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHK 108
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M PN T+ I+LK+C ++AL+ G+E+H + G +++ VGT
Sbjct: 109 HAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGT 168
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+ +Y +I A ++F + +++ WT MI Y G+ A L L E++
Sbjct: 169 ALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLM-LQMEQEGFK 227
Query: 200 WNTIVSGYIDVRNMIEA-----------RKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
N I Y+ + N + R D + DV ++ YA +G +++ +
Sbjct: 228 PNAIT--YVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDAR 285
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ M R+V SWN +IG +A +G E D F +M TEG P+ +++L+ACA
Sbjct: 286 VVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG-CKPDAIMFLSILNACASA 344
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
GAL++ K +H +A +G + +V VG AL+ MY+K G I++A VF+ M +++++WN +I
Sbjct: 345 GALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMI 404
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SGLA HG G AL +F M G PD +TF+ +L AC+H GLV+EG S + +M Y I
Sbjct: 405 SGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGI 464
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P + H CMVDLL RAGRL EA F+ M ++ D W LLGSCR Y NVEL EL +
Sbjct: 465 EPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAK 524
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+L+PKN A +V+LSNIY + G+W V+ ++ MR+ G +K PG S IEV+
Sbjct: 525 ERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVD 577
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 193/429 (44%), Gaps = 74/429 (17%)
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N +VVL ++++ + + F + VLK C+K L +++H ++K+ N V
Sbjct: 7 NTLSEAIVVLMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI-------------------- 177
L+ +Y ++ A VF + +++ W +MI GY+
Sbjct: 66 MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125
Query: 178 ------------SCGDIVSAR-------CLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
+C + + + C+ E DV + ++ Y ++ EAR+
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARR 185
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD + D+ISW M+ YA +G+ +E RL +M +
Sbjct: 186 IFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQ---------------------- 223
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+ FK PN T V++L+ACA GAL + K VH +A G + +V VG AL+
Sbjct: 224 -EGFK---------PNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQ 273
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MYAK G I++A VF+ M +D+++WN +I A HGRG A LF +M+ G PD I
Sbjct: 274 MYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIM 333
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ IL AC G + E + A+D + + +V + +++G + +A RM
Sbjct: 334 FLSILNACASAGAL-EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM 392
Query: 459 PIEADAVIW 467
+ + V W
Sbjct: 393 KVR-NVVSW 400
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 18/323 (5%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K + ++ + +GLE + ++ A+ + AR +FD++ ++VVSWN M +
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
A++ LF QM+ P+ F +L +C AL +++H L +G ++
Sbjct: 307 AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV 366
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----- 190
VGTAL+ +YS +I+ A VF M RNVV W +MI+G G A +F
Sbjct: 367 RVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAH 426
Query: 191 -LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDV 244
+ P+R + + ++S + E R + M + DV N M+ G +
Sbjct: 427 GVKPDR--VTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRL 484
Query: 245 EECKRLFEEMP-ERNVFSWNGLIGGYANNG-LFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
E K + M + + +W L+G G + L A +R+ + + N AT V +
Sbjct: 485 MEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPK---NAATYVLLS 541
Query: 303 SACARLGALDFSKWVHVYAEYNG 325
+ A G D WV G
Sbjct: 542 NIYAEAGKWDMVSWVRTMMRERG 564
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 3/233 (1%)
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V VL C + L +K VH + + N V N L+ +Y +CG ++ A VF+++
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVK 91
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K +WN +I+G H A+ LF EM + G P+ T++ IL AC + ++ G
Sbjct: 92 KSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWG-KE 150
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
+ + + ++ + + G + EA + + D + W ++G+
Sbjct: 151 VHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL-MNHDIISWTVMIGAYAQSG 209
Query: 479 N-VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
N E L L+ E N +V + N G K V R+ D G +
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/584 (34%), Positives = 313/584 (53%), Gaps = 57/584 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ ++ L QIQ Q+V++GL ++ + R++ CA + K++ Y ++ +I + NV S
Sbjct: 65 ERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFS 124
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCL- 125
WNA GY ++ +L+ +M + P+ T+P++LK C G+ CL
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCC-------GQYSSCLG 177
Query: 126 ------VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
VLK GF +IFV A I + + + AY VF + R++V W SMI G +
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 180 GDIVSARCLF---------------------------------------ELAPERDVILW 200
G + A ++ E E + L
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++ Y+ ++ AR LFD M +K ++SW TM+ GYA G ++ + + ++PE++V
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
WN +I G E L F M + P+ T+V LSAC++LGALD W+H Y
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIR-TIEPDKVTMVNCLSACSQLGALDVGIWIHHY 416
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
E + +V +G AL+DMYAKCG I A+ VF + ++ +TW +I GLA+HG A
Sbjct: 417 IERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDA 476
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
LS F +M + G +PD ITF+G+L AC H GLVEEG YF M+ +++ P+++HY CMVD
Sbjct: 477 LSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVD 536
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG L EA + VK MP+ ADA + L +CRVY NV++ E +L E++P++ N
Sbjct: 537 LLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGN 596
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+L+++Y + WK+ + M D G +K PGCS +E+N +V
Sbjct: 597 YVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIV 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 169/381 (44%), Gaps = 41/381 (10%)
Query: 191 LAPERDVILWNT---------IVSGYIDVRNMIEARKLFDQMPKKDVI------SWNTML 235
L+P I WNT ++S +++++ +++ QM +I S
Sbjct: 39 LSPITKTINWNTTHSFVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAF 98
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ + +++ C R+ + E NVFSWN I GY +G +KRML G + P++
Sbjct: 99 CALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDN 158
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T +L C + V + G++ ++ V NA I M CG + A DVFN
Sbjct: 159 HTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNK 218
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH---MGLV 412
+DL+TWN++I+G G A+ ++ EM+ P+ IT IG++ +C+ + L
Sbjct: 219 SRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG 278
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL-L 471
+E Y + ++++I P ++D+ + G L A M + V W + L
Sbjct: 279 KEFHCYIKEHGLEFTI-PLTN---ALMDMYVKCGELLTARVLFDNMA-QKTLVSWTTMVL 333
Query: 472 GSCRVYKNVELAELALERLTELEPKN--PANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
G Y ++A E L ++ K+ P N ++ + G+ ++ +R
Sbjct: 334 G----YARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIR---- 385
Query: 530 KKLPGCSSIEVNEVVMLGCLS 550
+IE ++V M+ CLS
Sbjct: 386 -------TIEPDKVTMVNCLS 399
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/566 (36%), Positives = 311/566 (54%), Gaps = 42/566 (7%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNG 74
L QIQ + +GL + R++ CA + YA +FD+ N WN M G
Sbjct: 67 QLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKG 126
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y + F QM + A + +F LK+C + G +H ++ K GF ++
Sbjct: 127 YCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSD 186
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI----------------- 177
+FV LI+ Y + A ++F E ++VV WT+MINGY
Sbjct: 187 LFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLS 246
Query: 178 ---------------SC---GDIVSARCLFELAPERDVI----LWNTIVSGYIDVRNMIE 215
+C GD + L E +D+ L N ++ Y+ +
Sbjct: 247 SDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTT 306
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR++F+ M ++DV SW ++L+GYA NGD+ ++LF+EMPERN+ SWN +I GY+ N
Sbjct: 307 AREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQP 366
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV-YAEYNGYQGNVCVGN 334
E L+ F M+ + P + T+V VLSA +LG L+ + +H + G Q ++ + N
Sbjct: 367 MEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKN 426
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
A++DMYAKCG I+ A +F+SM K+L++WN++IS A +G AL+LF +M +G P
Sbjct: 427 AVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKP 486
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ITFIG+L AC++ G V EG ++F+SM + + P+ EHY CMVDLL+R G L EA +
Sbjct: 487 DHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYEL 546
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
+ RMP+EA W LL +CR + NVE+A+LA E+L EL+P++ + +L+NI D +W
Sbjct: 547 ISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKW 606
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEV 540
KDV ++ MR+ G KK+PG S IE+
Sbjct: 607 KDVRMVRRMMRERGVKKVPGHSLIEI 632
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 302/541 (55%), Gaps = 66/541 (12%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNA 70
++ +HL QIQTQ++ +G +S + + C + + YA ++F+ I + +N
Sbjct: 43 KSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNL 102
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ + +N R V+LF Q+++ P+ FT+P V K+ + +REGE+++ V+K+G
Sbjct: 103 VIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSG 162
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ +V +L+++Y+ G + + R +FE
Sbjct: 163 LEFDTYVCNSLMDMYA-------------------------------EVGRVQNLRQVFE 191
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEA----RKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
P+RDV+ WN ++SGY+ R +A R++F+ MP K VI W +M+SGY N G ++E
Sbjct: 192 EMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDE 251
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LFE P R+V W +I GY F + + F+ M + RV P+ T+V +L+
Sbjct: 252 ARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIK-RVSPDRFTLVALLT--- 307
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ VG ALI+MYAKCG IE ++++FN + KD +W +
Sbjct: 308 ----------------------DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTS 345
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II GLAM+G+ + AL LF EM G PD ITFIG+L AC+H GLVEEG +F+SM Y
Sbjct: 346 IICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVY 405
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI---WANLLGSCRVYKNVELA 483
I P++EHYGC++DLL RAG+L EA + +++ P + VI + LL +CR + NVE+
Sbjct: 406 QIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMG 465
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E +RL +E + + +L+NIY RW+DV +++ M+D G KK+PGCSS+EVN +
Sbjct: 466 ERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGI 525
Query: 544 V 544
V
Sbjct: 526 V 526
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 303/537 (56%), Gaps = 34/537 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSW 68
+ ++T+ L +I Q++ +G K +I + + + A + + YA +F I + SW
Sbjct: 35 QSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSW 94
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
M G+ + + + + M++ N FTF VLK+ + +EG +H ++K
Sbjct: 95 TTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVK 154
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GF ++F ALI +Y +I A+ +F EM NVV W +MI G CGD AR L
Sbjct: 155 VGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRL 214
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
F PER+V WN +V GY + ++ AR LFD MP++DV+SW +M+S Y NG E
Sbjct: 215 FGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEAL 274
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
LF+EM ++ G + + + I ++LSACA++
Sbjct: 275 ELFKEM----------MLAGVSADSII----------------------ITSILSACAQI 302
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
GALD +W+H Y + + + +V + AL+DMYAKCG I+ A VFN+M K+L +WN ++
Sbjct: 303 GALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAML 362
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SGLA+HG G AL LF +M++ G P+ ITF+ +L AC+H+G VEEG F M +++I
Sbjct: 363 SGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNI 422
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P++EHYGCMVD+L R G + EA + ++ MP+E + VIW LL +C+V+ + E +
Sbjct: 423 TPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVG 482
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF-KKLPGCSSIEVNEVV 544
+ +L ++ +V+LSNI+ +W +V + + M+ G KK+PG SSIE++ VV
Sbjct: 483 YIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVV 539
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 301/534 (56%), Gaps = 13/534 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I ++ SG++ + ++ ++ + + A+ +F+ ++++SWN+M G+AQ+
Sbjct: 508 IHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGS 567
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF +MKK P+ TF VL C AL G ++H L++++G + ++ +G A
Sbjct: 568 YEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNA 627
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPE 194
LI +Y +++ AY+VF + RNV+ WT+MI G+ G+ A LF P
Sbjct: 628 LINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPV 687
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRL 250
+ +++I+ + + E +K+ + D N ++S Y+ +G + + +++
Sbjct: 688 KST--FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKV 745
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F++MP R++ SWN +I GYA NGL L +M +G V N + V++L+AC+ A
Sbjct: 746 FDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVL-NKFSFVSILNACSSFSA 804
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ K VH QG+V VG ALI MYAKCG +E A +VF++ K+++TWN +I+
Sbjct: 805 LEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINA 864
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HG + AL F+ M G PDG TF IL AC H GLV EG F S+ + + P
Sbjct: 865 YAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSP 924
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
IEHYGC+V LL RAGR EA + +MP DA +W LLG+CR++ NV LAE A
Sbjct: 925 TIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNA 984
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L +NPA +V+LSN+Y GRW DVA+I+ M G +K PG S IEV+ ++
Sbjct: 985 LKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNII 1038
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 205/428 (47%), Gaps = 29/428 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+LE K +H ++++ +G ++ + ++ + + + AR++F I ++VVS+N
Sbjct: 198 ELEYGKKIH---SKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNT 254
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M YAQ + + LF QM P+ T+ +L + + L EG+ +H L + G
Sbjct: 255 MLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEG 314
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++I VGTAL ++ + A + +R+VVV+ ++I G A +
Sbjct: 315 LNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYY 374
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARK-----------LFDQMPKKDVISWNTMLSGYA 239
V++ T Y+ V N K + + DV N+++S YA
Sbjct: 375 QMRSDGVVMNRTT---YLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA 431
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
GD+ + LF MP+R++ SWN +I GYA E + +K+M +EG V P T +
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG-VKPGRVTFL 490
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+LSAC A K +H +G + N + NAL++MY +CG I A +VF +
Sbjct: 491 HLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT-----------H 408
D+I+WN++I+G A HG A LF EMK G PD ITF +L C H
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610
Query: 409 MGLVEEGL 416
M ++E GL
Sbjct: 611 MLIIESGL 618
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 247/486 (50%), Gaps = 13/486 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q+V +G+ +++ +I + + ++ A ++F K+ ++V+SWN++ + YAQ
Sbjct: 103 RIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQG 162
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + LF +M+ +P+ T+ +L +C L G+++H +++ G++ + V
Sbjct: 163 FKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN 222
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE---R 195
+L+ +Y + + +A +VF + R+VV + +M+ Y + LF +++ E
Sbjct: 223 SLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPP 282
Query: 196 DVILWNTIVSGYIDVRNMIEARKLF----DQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
D + + ++ + + E +++ ++ D+ + + + GDV K+
Sbjct: 283 DKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL 342
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E +R+V +N LI A +G + E + + +M ++G V N T ++VL+AC+ AL
Sbjct: 343 EAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM-NRTTYLSVLNACSTSKAL 401
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ +H + G+ +V +GN+LI MYA+CG + A ++FN+M +DLI+WN II+G
Sbjct: 402 GAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGY 461
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A A+ L+ +M++ G P +TF+ +L ACT+ +G + + + I
Sbjct: 462 ARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDI-LRSGIKSN 520
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA-ELALERL 490
++++ R G + EA + + D + W +++ + + E A +L LE
Sbjct: 521 GHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAAYKLFLEMK 579
Query: 491 TE-LEP 495
E LEP
Sbjct: 580 KEGLEP 585
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 180/376 (47%), Gaps = 14/376 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E LE + +H + ++ SGL+ + +I + + A ++F + +NV+SW
Sbjct: 601 EALELGRQIHML---IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWT 657
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM G+A R LF QM+ P TF +LK+C+ L EG+++ +L +
Sbjct: 658 AMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS 717
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G+ + VG ALI YS ++ A KVF +M R+++ W MI GY G +A
Sbjct: 718 GYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFA 777
Query: 190 ELAPERDVIL----WNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANN 241
E+ V+L + +I++ + E +++ ++ K+ DV ++S YA
Sbjct: 778 YQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKC 837
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G +EE + +F+ E+NV +WN +I YA +GL + LD F M EG + P+ +T ++
Sbjct: 838 GSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEG-IKPDGSTFTSI 896
Query: 302 LSACARLG-ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TK 359
LSAC G ++ ++ +G + L+ + + G + A + N M
Sbjct: 897 LSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPP 956
Query: 360 DLITWNTIISGLAMHG 375
D W T++ +HG
Sbjct: 957 DAAVWETLLGACRIHG 972
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 73/401 (18%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
++++C + +L E + +H +++ G +IF+ LI +Y +++ A++VF +M R+
Sbjct: 88 LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147
Query: 166 VVVWTSMINGYISCG-------------------------DIVSARC------------- 187
V+ W S+I+ Y G I++A C
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207
Query: 188 -LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+ E +RD + N++++ Y ++ AR++F + ++DV+S+NTML YA VEE
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
C LF +M +EG + P+ T + +L A
Sbjct: 268 CIGLFGQMS-------------------------------SEG-IPPDKVTYINLLDAFT 295
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LD K +H A G ++ VG AL M+ +CG + A + +D++ +N
Sbjct: 296 TPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNA 355
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+ LA HG A +++M++ G + + T++ +L AC+ + G S +
Sbjct: 356 LIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEV 414
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
++ ++ + AR G L A + MP + D + W
Sbjct: 415 GHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISW 454
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%)
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
N A V ++ C R +L +K +H G ++ + N LI+MY KC + +A VF
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
M +D+I+WN++IS A G A LF EM+ AG +P IT+I IL AC +E
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 414 EG 415
G
Sbjct: 201 YG 202
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/557 (35%), Positives = 319/557 (57%), Gaps = 23/557 (4%)
Query: 3 DTTGAHSEQLETTKHLHQI--QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
D H + TK H + +T ++ + L S I+ A + + YARK+F ++
Sbjct: 15 DFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLIS---FLALSHSGDLNYARKLFTQM 71
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+ + N M GYA+++ V L+ M + + +T+P VL +C ++ A++ G
Sbjct: 72 QNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGR 131
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
HC VLKNGF +++FV ALI+ Y + A VF E R+VV W MIN +++ G
Sbjct: 132 RFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKG 191
Query: 181 DIVSARCLFELAPER--------DVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----D 227
A F+L E D + ++V + N+ E K K+ +
Sbjct: 192 LSEKA---FDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNL-ERGKFLHSYSKELGLDEN 247
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+ N +L Y D+E + +F + E++V SW ++ G A +G F E L F++M
Sbjct: 248 LRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQL 307
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
++ ++ T+V VLSACA+ GALD K++H+ + ++ + AL+DMYAKCG I+
Sbjct: 308 -NKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSID 366
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A+ VF M +++ TWN +I GLAMHG G A+SLF +M++ MPD +TFI +LCAC+
Sbjct: 367 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 426
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H GLV+EGL+ FQ+M + I P++EHYGC+VDLL RA ++ +A+ F++ MPI+A++V+W
Sbjct: 427 HAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLW 486
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
A LLG+CR + +LAE R+ ELEP + +VMLSN+Y + +W +++ M++
Sbjct: 487 ATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNK 546
Query: 528 GFKKLPGCSSIEVNEVV 544
G +K PGCS IE+N ++
Sbjct: 547 GIEKTPGCSWIELNGMI 563
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 307/537 (57%), Gaps = 17/537 (3%)
Query: 20 QIQTQVVTSGLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + ++ +G+ DYIT ++ + + A +F+ NVV WN M Y Q
Sbjct: 266 QLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+F QM+ PN FT+P +L++C + GE++H L +KNGF ++++V
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI++YS + ++ A K+ +++R+VV WTSMI GY+ A F+ +D
Sbjct: 385 GVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFK--EMQDCG 442
Query: 199 LW------NTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+W + S ++ M I AR ++ D+ WNT+++ YA G EE
Sbjct: 443 VWPDNIGLASAASACAGIKAMRQGLQIHAR-VYVSGYAADISIWNTLVNLYARCGRSEEA 501
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF E+ ++ +WNGLI G+ + L+ + L F +M G + N T ++ +SA A
Sbjct: 502 FSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKY-NVFTFISAISALAN 560
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L + K VH A G+ V NALI +Y KCG IE+A +F+ M ++ ++WNTI
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ + HGRG AL LF +MK G P+ +TFIG+L AC+H+GLVEEGLSYF+SM+ Y
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P +HY C+VD+L RAG+L A FV MPI A+A+IW LL +C+V+KN+E+ ELA
Sbjct: 681 LNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAA 740
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L ELEP + A++V+LSN Y G+W + +++ M+D G +K PG S IEV V
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAV 797
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 220/478 (46%), Gaps = 28/478 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V GL I +I A+ + AR++F +++ ++ VSW AM +GYAQ
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L++QM +P + VL +C K +G +H V K F + FVG
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI LY + + A +VF +M + V + ++I+G+ CG A +F+ L P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKR 249
D + ++++ V ++ + ++L + K D I+ ++L Y GD+E
Sbjct: 244 --DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F NV WN ++ Y + + F +M G + PN T +L C G
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG-IHPNKFTYPCILRTCTCTG 360
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
++ + +H + NG++ ++ V LIDMY+K ++ A + ++ +D+++W ++I+
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL+ F EM++ G PD I AC + + +GL Y A
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL---GSCRVYKN 479
D SI + +V+L AR GR EA + + D + W L+ G R+Y+
Sbjct: 481 DISI------WNTLVNLYARCGRSEEAFSLFREID-HKDEITWNGLISGFGQSRLYEQ 531
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 10/191 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K Q+ + V +G + +I+ + + A+ +F +++ +N VSWN +
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+Q+ + LF QMK+ PN TF VL +C + + EG + + N +
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS-YFKSMSNVY 679
Query: 132 RANIFVG--TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGDIV 183
N ++++ ++ A + EM N ++W ++++ I G++
Sbjct: 680 GLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL- 738
Query: 184 SARCLFELAPE 194
+A+ L EL P
Sbjct: 739 AAKHLLELEPH 749
>gi|356529649|ref|XP_003533401.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Glycine max]
Length = 427
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 187/333 (56%), Positives = 234/333 (70%), Gaps = 13/333 (3%)
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK-----RMLTEGRVFPNDATI 298
+ + ++F EM E+NVF+W +I + F R +G V P+D T+
Sbjct: 97 IGDAYKVFAEMREKNVFAWTAIIAAHVACSDMLSARRLFDLGVKVRECGDGEVVPDDYTV 156
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
VTVLS C+RLG L+ K VHVYAE N Y+GN+ VGN LI+MYAKCGIIE A+DVFN +D
Sbjct: 157 VTVLSVCSRLGDLEMGKXVHVYAERNAYKGNLFVGNGLINMYAKCGIIEKALDVFNGLD- 215
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ITWNTII+GLAMHG A ALSLF +MK+ GE PDG+T +GIL ACT MGL + +
Sbjct: 216 --VITWNTIINGLAMHGHMANALSLFEQMKSTGERPDGVTLVGILSACTQMGLARDRFMH 273
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+SM DYSIVPQIEHYGCMVDLL R + + V+FV++MP+E DAVI A +CR+YK
Sbjct: 274 FRSMVDDYSIVPQIEHYGCMVDLLGRX-LIDQTVNFVRKMPMEPDAVIXAAR--ACRMYK 330
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
NVE+AELAL+RL ELEP NPANFVMLSNIY DLGRW+DVAR+KV MR+TGF+K+PGCS I
Sbjct: 331 NVEMAELALQRLIELEPNNPANFVMLSNIYXDLGRWQDVARLKVTMRETGFRKVPGCSVI 390
Query: 539 EVNEVVM--LGCLSRELDRKSIVRAEANMIKLL 569
N+ V+ R + +SI RA + LL
Sbjct: 391 GCNDSVVEFYSLDERHPETESIYRALQGLTILL 423
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 63/316 (19%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
VT ++ +DY+TP +TA A+L + + ++ V F A R
Sbjct: 16 VTHVIQGNDYVTPSFVTAWARLSGIRHV----PRVRPSRVPPRRGRFV-RAHAPRRRVPE 70
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
+L L VL+ C + R G +F+G A
Sbjct: 71 LLLVPHGSL-----------VLRLCERGERRRTG--------------GVFIGDA----- 100
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWNTIV 204
YKVF EM E+NV WT++I +++C D++SAR LF+L + R+ +
Sbjct: 101 ---------YKVFAEMREKNVFAWTAIIAAHVACSDMLSARRLFDLGVKVRECGDGEVVP 151
Query: 205 SGYIDVRNMIEARKLFD-------------QMPKKDVISWNTMLSGYANNGDVEECKRLF 251
Y V + +L D K ++ N +++ YA G +E+ +F
Sbjct: 152 DDYTVVTVLSVCSRLGDLEMGKXVHVYAERNAYKGNLFVGNGLINMYAKCGIIEKALDVF 211
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ +V +WN +I G A +G L F++M + G P+ T+V +LSAC ++G L
Sbjct: 212 NGL---DVITWNTIINGLAMHGHMANALSLFEQMKSTGE-RPDGVTLVGILSACTQMG-L 266
Query: 312 DFSKWVHVYAEYNGYQ 327
+++H + + Y
Sbjct: 267 ARDRFMHFRSMVDDYS 282
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 191/496 (38%), Positives = 299/496 (60%), Gaps = 14/496 (2%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
ARK+FD + ++NVVSW +M GY Q LF +M + N ++ +++ +K
Sbjct: 102 ARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPR----RNVVSWTVMIGGLLK 157
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ + + ++L ++ + ++ V T +I Y ++ A ++F EM RNV WT+M
Sbjct: 158 ESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTM 213
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
++GY G + AR LFE+ PER+ + W ++ GY M EA +LF+ MP K +++ N
Sbjct: 214 VSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACN 273
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
M+ + G++ + +FE M ER+ +WN +I + GL E L F RM EG V
Sbjct: 274 EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREG-VA 332
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
N ++++VLS CA L +LD + VH + + ++ V + LI MY KCG + A +
Sbjct: 333 LNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGI 392
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
FN KD++ WN++I+G + HG G AL++FH+M ++G PD +TFIG+L AC++ G V
Sbjct: 393 FNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKV 452
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EG F++M Y + P IEHY CMVDLL RAGR+ EA++ V++MP+E DA++W LLG
Sbjct: 453 KEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLG 512
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA--RIKVAMRDTGFK 530
+CR + ++LAE+A+E+L +LEPKN +V+LS++Y GRW+DV R K+ R
Sbjct: 513 ACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR---VI 569
Query: 531 KLPGCSSIEVNEVVML 546
K PGCS IEV + V +
Sbjct: 570 KFPGCSWIEVEKKVHM 585
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 43/366 (11%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK + +I Q+ ++ AR++FD++ +NV +W M +GYA+N LF
Sbjct: 173 EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEV 232
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN----IFVGTALIELYS 146
M + N ++ +L + ++E EL F A I +I +
Sbjct: 233 MPE----RNEVSWTAMLMGYTQSGRMKEAFEL--------FEAMPVKWIVACNEMILQFG 280
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL-WNTIVS 205
+ A +F M ER+ W +MI + G + A LF V L + +++S
Sbjct: 281 LAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMIS 340
Query: 206 --------GYIDVRNMIEARKL---FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+D + AR + FDQ D+ + +++ Y GD+ K +F
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQ----DLYVASVLITMYVKCGDLVRAKGIFNRF 396
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-- 312
++V WN +I GY+ +GL E L+ F M + G V P++ T + VLSAC+ G +
Sbjct: 397 LFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG-VQPDEVTFIGVLSACSYSGKVKEG 455
Query: 313 ---FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTII 368
F Y G + C ++D+ + G ++ A+++ M + D I W ++
Sbjct: 456 FEIFEAMKCTYQVEPGIEHYAC----MVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511
Query: 369 SGLAMH 374
H
Sbjct: 512 GACRNH 517
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ ++V S ++ Y+ +IT + + A+ +F++ ++VV WN+M
Sbjct: 348 LASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSM 407
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNG 130
GY+Q+ + +F M P+ TF VL +C ++EG E+ +
Sbjct: 408 ITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQ 467
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
I +++L ++ A ++ +M E + +VW +++
Sbjct: 468 VEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGA 513
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
++C + I Y + G I NA VF++ + + + +WN ++S + AL LF +
Sbjct: 18 SLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQ 77
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ-----------SMAMDYSIVPQIEH- 434
M + ++F G++ G+V + F SM Y +E
Sbjct: 78 MPQR----NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEA 133
Query: 435 --------------YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
+ M+ L + R+ +A +P E D V+ N++G Y V
Sbjct: 134 EKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP-EKDVVVVTNMIGG---YCQV 189
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+ A E E++ +N + + + Y GR DVAR
Sbjct: 190 GRLDEARELFDEMKVRNVFTWTTMVSGYAKNGR-VDVAR 227
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 300/530 (56%), Gaps = 43/530 (8%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A ++F +I + WN M G++Q + + M N T+P +LK+C +
Sbjct: 749 ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACAR 808
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
I+ + +H VLK GF +++FV ALI Y+ + A KVF EM ER++V W S+
Sbjct: 809 ISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSL 867
Query: 173 INGYISC-------------------GDIVSA--------------------RCLFELAP 193
I GY C GD V+ + E
Sbjct: 868 ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKV 927
Query: 194 ERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
E DV L NT++ Y R+M++ AR++FD+M ++++SWN M+ GY G++ ++LF+
Sbjct: 928 EVDVYLGNTLIDMY-GRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFD 986
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+MP R+V SW +I Y+ G F + + F+ M+ +V P++ T+ +VLSACA +GALD
Sbjct: 987 DMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVT-KVKPDEITVASVLSACAHIGALD 1045
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ VH Y ++ VGNALIDMY KCG +E + VF M +D ++W ++I+GLA
Sbjct: 1046 VGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLA 1105
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
++G AL+LF M G P TF+G+L AC H G+V++GL YF+SM Y + P++
Sbjct: 1106 VNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEM 1165
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HYGC+VDLL+R+G L A +F+KRMP++ D V+W LL + +V+ N+ LAE+A ++L E
Sbjct: 1166 KHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLE 1225
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+P N N+++ SN Y RW+DV +++ M ++ K SS+E+N+
Sbjct: 1226 TDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIND 1275
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 50/400 (12%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ +V+ G + +++ +I A ++ +ARK+FD+++++++VSWN++ GY +
Sbjct: 817 VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRR 876
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ V+V+F +M+ D + T V+ +C + + + + +N ++++G
Sbjct: 877 YSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNT 936
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI++Y ++ A +VF M +RN+V W +MI GY G++V+AR LF+ P RDVI W
Sbjct: 937 LIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISW 996
Query: 201 NTIVSGYIDVRNMIEARKLFDQM------PKK---------------------------- 226
+++S Y +A +LF +M P +
Sbjct: 997 TSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK 1056
Query: 227 -----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
D+ N ++ Y G VE+ +FEEM +R+ SW +I G A NG L+
Sbjct: 1057 YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNL 1116
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNAL 336
F ML EG V P T V VL ACA G +D F VY + CV
Sbjct: 1117 FSLMLREG-VRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCV---- 1171
Query: 337 IDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
+D+ ++ G + A + M D++ W ++S +HG
Sbjct: 1172 VDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHG 1211
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 34/286 (11%)
Query: 219 LFDQMPKKDVISWNTMLSGYA-NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+ ++ D IS +L YA + ++ + LF ++P + WN +I G++ E
Sbjct: 720 MIKELLPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIE 779
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
+ + M ++ +F N+ T +L ACAR+ + + VH G+ ++ V NALI
Sbjct: 780 AIRNYNLMYSQA-LFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALI 837
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
YA + A VF+ M +DL++WN++I G R + L +F EM+ A D +
Sbjct: 838 HGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAV 897
Query: 398 TFIGILCACTHM---GLVEEGLSYFQSMAMDYSIV---PQIEHYG--CMVDLLAR----- 444
T + ++ ACT + G+V+ + Y + ++ + I+ YG MVDL R
Sbjct: 898 TMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRM 957
Query: 445 -----------------AGRLAEAVDFVKRMPIEADAVIWANLLGS 473
AG L A MP D + W +++ S
Sbjct: 958 RDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP-HRDVISWTSMISS 1002
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 314/562 (55%), Gaps = 42/562 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI ++ K ++ ++ A+ ++ ARK+FD+++++NVVSW +M GYA+ E
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARRE 213
Query: 80 FHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
F + V LF +M + D +PN T V+ +C K+ L GE+++ + +G N +
Sbjct: 214 FAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMI 273
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA------ 192
+AL+++Y AI+ A ++F E N+ + +M + Y+ G A + L
Sbjct: 274 SALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIR 333
Query: 193 PER-------------DVILWNTIVSGYIDVRNMIE---------------------ARK 218
P+R ILW GY+ +RN E A +
Sbjct: 334 PDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFESWDNICNALIDMYMKCHRQDTAFR 392
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD+M K V++WN++++GY NG+V+ F MPE+N+ SWN +I ++ E
Sbjct: 393 IFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEA 452
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
++ F M ++ V + T++++ SAC LGALD +KW++ Y E N Q +V +G L+D
Sbjct: 453 IEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVD 512
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
M+++CG E+A+ +FNS+ +D+ W I +AM G A+ LF+EM G PDG+
Sbjct: 513 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVV 572
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
FIG L AC H GLV++G F SM + + P+ HYGCMVDLL RAG L EA+ +K M
Sbjct: 573 FIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDM 632
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P E + VIW +LL +CRV NVE+A A E++ L P+ ++V+LSN+Y GRW D+A
Sbjct: 633 PTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 692
Query: 519 RIKVAMRDTGFKKLPGCSSIEV 540
+++++M++ G +K PG S I++
Sbjct: 693 KVRLSMKEKGLRKPPGTSVIQI 714
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 154/620 (24%), Positives = 269/620 (43%), Gaps = 74/620 (11%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMFDKIT 61
T + + +T L + GL+ +++ +L + +++A+++F+
Sbjct: 34 TPSSLKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGE 93
Query: 62 DQNVV-SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+N++ GYA + + ++LF +M P+ +TFP L C K G
Sbjct: 94 SYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGI 153
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS-- 178
++H L++K + ++FV +L+ Y+ ++ A KVF EM ERNVV WTSMI GY
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARRE 213
Query: 179 -CGDIVSARCLFELAPERDVILWNT----IVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
D V F + + DVI + ++S + ++ K++D + + +
Sbjct: 214 FAKDAVDL--FFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 234 MLSG----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
M+S Y ++ KRLF+E N+ N + Y GL E L M+ G
Sbjct: 272 MISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSG 331
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--NVCVGNALIDMYAKC---- 343
+ P+ ++++ +S+C++L + + K H Y NG++ N+C NALIDMY KC
Sbjct: 332 -IRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALIDMYMKCHRQD 388
Query: 344 ----------------------GIIEN-----AVDVFNSMDTKDLITWNTIISGLAMHGR 376
G IEN A + FN+M K++++WNTIIS L
Sbjct: 389 TAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENM 448
Query: 377 GAGALSLFHEMKNAGEMP-DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A+ +FH M++ + DG+T + I AC H+G ++ + + + I +
Sbjct: 449 YEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKN-RIQLDVRLG 507
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
+VD+ +R G A+ + D W +G+ + NVE A + E
Sbjct: 508 TTLVDMFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGL 566
Query: 496 KNPANFVMLSNIY-----GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
K P V + + G + + K++ +KL G S E V GC+
Sbjct: 567 K-PDGVVFIGALTACCHGGLVQQGKEIF--------NSMEKLHGVSP----EDVHYGCMV 613
Query: 551 RELDRKSIVRAEANMIKLLP 570
L R ++ +IK +P
Sbjct: 614 DLLGRAGLLEEALQLIKDMP 633
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 313/566 (55%), Gaps = 45/566 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKITD--------QNVVSWN 69
I +++ +G + +T RI+ A A ++ +AR +F ++ WN
Sbjct: 6 IXARLIKTGFIXNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFAHGEVEDPFLWN 65
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+ ++ + ++ F M + + F+ +VLK+C ++ ++EG ++H + K
Sbjct: 66 AVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKT 125
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G +++F+ LI LY + A ++F M +R+ V + SMI+GY+ CG I SAR LF
Sbjct: 126 GIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELF 185
Query: 190 ELAP----------------------------------ERDVILWNTIVSGYIDVRNMIE 215
+L P E+D+I WN+++ GY+ M +
Sbjct: 186 DLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMED 245
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
A+ LF MP++DV++W TM+ GYA G V + K LF++MP R+V ++N ++ GY N
Sbjct: 246 AKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYN 305
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E L+ F M E + P++ T+V VLSA A+LG L + +H+Y + +G A
Sbjct: 306 MEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVA 365
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
LIDMY+KCG I+ A+ VF ++ K + WN +I GLA+HG G A + E++ PD
Sbjct: 366 LIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLEIERRSIKPD 425
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITF+GIL AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G + A + +
Sbjct: 426 DITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 485
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+ MP+E + VIW L +C +K E E+ + L NP+++V+LSN+Y G WK
Sbjct: 486 EEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYASFGMWK 545
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEVN 541
D R++ M++ +K+PGCS IE++
Sbjct: 546 DARRVRTMMKERELQKVPGCSWIELD 571
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 290/522 (55%), Gaps = 42/522 (8%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEE 121
NV WN M +N L M+ L A PN TF +LK+ V ++EGEE
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---- 177
+H V++ GF + FV AL+ Y + +VF EM + +V+WT +I Y+
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 178 ----------------------------SCG---DIVSAR---CLFELAP-ERDVILWNT 202
+CG D+ A+ C E + E D + +T
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
++S Y + ++ A + F + P K+++ WNTM+ + ++E K+LF+ MP+R+V SW
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSW 292
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N +IGG+A G + E L F M G V PN T+++ LSACA GALD W+H Y +
Sbjct: 293 NSMIGGFARIGQYQEALTWFHEMEFSG-VSPNALTLLSTLSACASHGALDTGAWIHAYVD 351
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
N + + ++LIDMY+KCG I+ AV +F +DL TW +I+ GLAMHGRG AL
Sbjct: 352 KNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALH 411
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
F +MK A PD +T +G+L AC H GL+++G YFQSM + +VP++EHYGCMVDLL
Sbjct: 412 YFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLL 471
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
R G L EA D + MP+EA+ +IW L +CRV+ NVEL E+A RL L+P++P V
Sbjct: 472 GRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARV 531
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
MLSN+Y + +W ++ ++ G KK PGCSSIEVN V
Sbjct: 532 MLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSV 573
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 42/403 (10%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+ K ++ VV +G S++++ ++ + R++FD++ +V W +
Sbjct: 105 QEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLII 164
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y F + LF M+++ P+ V+ +C + L + +HC + K+G
Sbjct: 165 RAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIE 224
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ FV + LI Y +++ AY+ F E +N+VVW +MI+ + ++ + LF+
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSM 284
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQM------PKK----------------DVIS 230
P+RDV+ WN+++ G+ + EA F +M P D +
Sbjct: 285 PDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGA 344
Query: 231 W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
W ++++ Y+ GD+++ ++FEE R++F+W ++ G A +G
Sbjct: 345 WIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHG 404
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE-YNGYQGNVCV 332
+ L F +M E +V P+D T+V VLSACA G LD W E G V
Sbjct: 405 RGEKALHYFSKM-KEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
++D+ + G ++ A D+ M + + I W +S +H
Sbjct: 464 YGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVH 506
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 309/536 (57%), Gaps = 15/536 (2%)
Query: 20 QIQTQVVTSGLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ- 77
Q+ + + +G+ SDYI ++ + + A +F+ NVV WN M + Q
Sbjct: 265 QLHSYLFKAGI-SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQI 323
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N+ ++ LF QM+ PN FT+P +L++C + GE++H L +K GF ++++V
Sbjct: 324 NDLAKSFE-LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSA-RCLFELAP 193
LI++YS +E A +V + E++VV WTSMI GY+ C D ++A + + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 194 ERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
D I + +SG + M I AR ++ DV WN +++ YA G + E
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHAR-IYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
FEEM ++ + NGL+ G+A +GL E L F RM G V N T V+ LSA A L
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANL 560
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+ K +H G+ VGNALI +Y KCG E+A F+ M ++ ++WNTII
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ + HGRG AL LF +MK G P+ +TFIG+L AC+H+GLVEEGLSYF+SM+ +Y I
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P+ +HY C++D+ RAG+L A F++ MPI ADA++W LL +C+V+KN+E+ E A +
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAK 740
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ELEP + A++V+LSN Y +W + +++ MRD G +K PG S IEV VV
Sbjct: 741 HLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 796
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 217/457 (47%), Gaps = 24/457 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + VT GL K + +I ++ + AR++F++++ ++ VSW AM +GYAQN
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L+ QM + +P + VL SC K +G +H K+GF + IFVG
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
A+I LY + A +VF +M R+ V + ++I+G+ CG A +FE L+P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + +++++ + ++ + +L + K D I ++L Y GDVE
Sbjct: 243 --DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F NV WN ++ + + + F +M G + PN T +L C
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG-IRPNQFTYPCILRTCTCTR 359
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+D + +H + G++ ++ V LIDMY+K G +E A V + KD+++W ++I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL+ F EM+ G PD I + C + + +GL Y +
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
D SI + +V+L AR GR+ EA + M ++
Sbjct: 480 DVSI------WNALVNLYARCGRIREAFSSFEEMELK 510
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L K QI +V+ +G + +I+ + A+ F +++++N VSW
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSW 616
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVL 127
N + +Q+ + LF QMKK PN TF VL +C + + EG +
Sbjct: 617 NTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSD 676
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGD 181
+ G R +I+++ ++ A K EM + +VW ++++ I G+
Sbjct: 677 EYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGE 736
Query: 182 IVSARCLFELAP 193
+A+ L EL P
Sbjct: 737 F-AAKHLLELEP 747
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 300/534 (56%), Gaps = 35/534 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q T K L ++ + ++ Y+ + ITAC+ ++ A ++ NV +N
Sbjct: 788 KQCSTPKLLESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYN 847
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+ G+ + + +M + P+ +T+ ++++ + GE L + K
Sbjct: 848 ALIKGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASAFASGF--GESLQAHIWKF 905
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++ + T LI YS + G I AR +F
Sbjct: 906 GFGFHVQIQTTLIGFYS-------------------------------ASGRIREARKVF 934
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PERD + W T+VS Y V +M A L +QMP+K+ +WN ++ GY G++E +
Sbjct: 935 DEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAES 994
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MP +++ SW +I GY+ N + E + F +M+ EG + P++ T+ TV+SACA LG
Sbjct: 995 LFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEG-IIPDEVTMSTVISACAHLG 1053
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ K VH+Y NG+ +V +G+AL+DMY+KCG +E A+ VF ++ K+L WN+II
Sbjct: 1054 VLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1113
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA HG AL +F +M+ P+ +TF+ + ACTH GLVEEG ++SM DYSIV
Sbjct: 1114 GLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIV 1173
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+EHYGCMV L ++AG + EA++ + M E +AVIW LL CR++KN+E+AE+A +
Sbjct: 1174 SNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNK 1233
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL-PGCSSIEVNE 542
L LEP N + +L ++Y + RW+DVA I+ MR+ G +K+ PG SSI +++
Sbjct: 1234 LMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDK 1287
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH LE K +H Q +G YI ++ ++ + A +F + +N+
Sbjct: 1050 AHLGVLEIGKEVHMYTVQ---NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1106
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH-CL 125
WN++ G A + F + + +F +M+ PN TF V +C + EG ++ +
Sbjct: 1107 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSM 1166
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ +N+ ++ L+S I A ++ G M+ E N V+W ++++G
Sbjct: 1167 IDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDG 1217
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 301/501 (60%), Gaps = 9/501 (1%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSC 110
YA +F + +V++WN+M + + R + +T+M ++ +P+ FTFP +LK C
Sbjct: 30 YAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ + G+ LH V+K +++++ T L+ +Y+ +++A +F M RN VVWT
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 171 SMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
SMI+GY+ A L++ E D + T+VS +++++ KL + +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209
Query: 227 DV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
D+ + + +++ YA GD++ +++F+++ +++V++W+ LI GY N E L F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ + + PN+ TI+ V+SACA+LG L+ +WVH Y +V + N+LIDM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG I+ A +F+SM KDLI+WN++++G A+HG G AL+ F M+ PD ITFIG+
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGV 389
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+H GLV+EG F + Y + + EHYGCMVDLL RAG LAEA +F++ MP++
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQP 449
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
D IW ++LG+CRVY N+EL E A L +LEP N +++LSNIY W +V +++
Sbjct: 450 DGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRE 509
Query: 523 AMRDTGFKKLPGCSSIEVNEV 543
M + G +K PGCSS+ ++ +
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNI 530
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 176/362 (48%), Gaps = 18/362 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ QVV L YI ++ A + AR +F+++ +N V W +M +GY +N
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++L+ +M++ P+ T ++ +C ++ L G +LH + + + +G+A
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-------LAP 193
L+ +Y+ ++ A +VF ++ +++V W+++I GY+ A LF + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
IL ++S + ++ R + D + + V N+++ ++ GD++ KR
Sbjct: 281 NEVTIL--AVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ M +++ SWN ++ G+A +GL E L F+ M T + P++ T + VL+AC+ G
Sbjct: 339 IFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD-LQPDEITFIGVLTACSHAG 397
Query: 310 ALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNT 366
+ K + + A Y + G ++D+ + G++ A + M + D W +
Sbjct: 398 LVQEGKKLFYEIEALYGVRLKSEHYG-CMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 367 II 368
++
Sbjct: 457 ML 458
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 300/545 (55%), Gaps = 48/545 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMF-----DKITDQN 64
+T L Q+ Q+ +GL++ +++ A A++ + + YARK F D +D
Sbjct: 36 KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDA 95
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+ N++ GY+ R ++L+ +M L PN +TFP VL C KI A EG ++H
Sbjct: 96 LFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K G ++F+ LI Y+ CG +
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYA-------------------------------ECGHMDH 184
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+FE ER+V+ W +++ GY EA LF +M K ++ N ++ Y G +
Sbjct: 185 GHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMV--NALVDMYMKCGAI 242
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ KRLF+E +RN+ +N ++ YA GL E L ML +G P+ T+++ +SA
Sbjct: 243 DAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR-PDRVTMLSAISA 301
Query: 305 CARLGALDFSK-----WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
A+L L + K WVH Y E NG ++ + AL+DM+A+CG ++A+ VFN M +
Sbjct: 302 SAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER 361
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ W I +AM G G GA LF++M G PD + F+ +L AC+H G VE+GL F
Sbjct: 362 DVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF 421
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
S+ D+ I PQIEHYGCMVDLL RAG L EA D +K MP+E + V+W +LL +CRV+KN
Sbjct: 422 -SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKN 480
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
VE+A A ER+ EL P+ V+LSNIY G+W DVAR+++ +R+ G +K+PG SS++
Sbjct: 481 VEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQ 540
Query: 540 VNEVV 544
VN V+
Sbjct: 541 VNGVI 545
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 306/537 (56%), Gaps = 17/537 (3%)
Query: 20 QIQTQVVTSGLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + ++ +G+ DYIT ++ + + A +F+ NVV WN M Y Q
Sbjct: 266 QLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+F QM+ PN FT+P +L++C + GE++H L +KNGF ++++V
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI++YS ++ A K+ +++R+VV WTSMI GY+ A F+ +D
Sbjct: 385 GVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFK--EMQDCG 442
Query: 199 LW------NTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+W + S ++ M I AR ++ D+ WNT+++ YA G EE
Sbjct: 443 VWPDNIGLASAASACAGIKAMRQGLQIHAR-VYVSGYAADISIWNTLVNLYARCGRSEEA 501
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF E+ ++ +WNGLI G+ + L+ + L F +M G + N T ++ +SA A
Sbjct: 502 FSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKY-NVFTFISAISALAN 560
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L + K VH A G+ V NALI +Y KCG IE+A +F+ M ++ ++WNTI
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ + HGRG AL LF +MK G P+ +TFIG+L AC+H+GLVEEGLSYF+SM+ Y
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P +HY C+VD+L RAG+L A FV MPI A+A+IW LL +C+V+KN+E+ ELA
Sbjct: 681 LNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAA 740
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L ELEP + A++V+LSN Y G+W + +++ M+D G +K PG S IEV V
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAV 797
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 222/478 (46%), Gaps = 28/478 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V GL I +I A+ + AR++F +++ ++ VSW AM +GYAQ+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L++QM +P + VL +C K +G +H V K F + FVG
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI LY + + A +VF +M + V + ++I+G+ CG A +F+ L P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKR 249
D + ++++ V ++ + ++L + K D I+ ++L Y GD+E
Sbjct: 244 --DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F NV WN ++ Y + + F +M G + PN T +L C G
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG-IHPNQFTYPCILRTCTCTG 360
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
++ + +H + NG++ ++ V LIDMY+K G ++ A + ++ +D+++W ++I+
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL+ F EM++ G PD I AC + + +GL Y A
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL---GSCRVYKN 479
D SI + +V+L AR GR EA + + D + W L+ G R+YK
Sbjct: 481 DISI------WNTLVNLYARCGRSEEAFSLFREIE-HKDEITWNGLISGFGQSRLYKQ 531
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 10/191 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K Q+ + V +G + +I+ + + A+ +F +++ +N VSWN +
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+Q+ + LF QMK+ PN TF VL +C + + EG + + N +
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS-YFKSMSNVY 679
Query: 132 RANIFVG--TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGY-----ISCGDIV 183
N ++++ ++ A + EM N ++W ++++ I G++
Sbjct: 680 GLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL- 738
Query: 184 SARCLFELAPE 194
+A+ L EL P
Sbjct: 739 AAKHLLELEPH 749
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 308/540 (57%), Gaps = 17/540 (3%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNG 74
L QI Q++ +GL + +I+ C+ + + YAR +F +I + + N++ G
Sbjct: 3 QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRG 62
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
H+ ++ + +M +P+ +TFP + KSC + EG+++HC K GF ++
Sbjct: 63 CTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASD 119
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----- 189
+ L+ +YS + +A KVF +M+++ VV W +MI + A LF
Sbjct: 120 TYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179
Query: 190 -ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDV 244
E +V L N +++ R++ +++ + + + + V+ ++ Y G V
Sbjct: 180 SENVKPNEVTLVN-VLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV 238
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ + LF++ E+N+FSWN +I G+ + + E L F+ M T+G + + T+ ++L A
Sbjct: 239 QLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKG-IKGDKVTMASLLLA 297
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
C LGAL+ KW+H Y + +V +G AL+DMYAKCG IE A+ VF+ M KD++TW
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+I GLAM G+ AL F EM G PD ITF+G+L AC+H G V+EG+S+F SM+
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
Y I P IEHYG +VD+L RAGR+AEA + +K MP+ D + LLG+CR++ N+E AE
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAE 477
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A ++L E++P + +V+LSNIY +W++ R + M + G +K PGCS IEV+ VV
Sbjct: 478 RAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVV 537
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 314/542 (57%), Gaps = 13/542 (2%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H E LE K +H +V G + Y+ I++ + M A ++FD + +NVVS
Sbjct: 324 HPEALEQGKKVHARMKEV---GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVS 380
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W AM G+AQ+ + F +M + PN TF +L +C +AL+ G+++ ++
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ G+ ++ V TAL+ +Y+ +++ A++VF ++ ++NVV W +MI Y+ +A
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + ++ + ++V ++ +L + + D+ N ++S +
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
N GD+ K LF +MP+R++ SWN +I G+ +G D FK M+ E + P+ T
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK-MMQESGIKPDKITFT 619
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+L+ACA AL + +H + +V VG LI MY KCG IE+A VF+ + K
Sbjct: 620 GLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK 679
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
++ +W ++I+G A HGRG AL LF++M+ G PD ITF+G L AC H GL+EEGL +F
Sbjct: 680 NVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHF 739
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
QSM +++I P++EHYGCMVDL RAG L EAV+F+ +M +E D+ +W LLG+C+V+ N
Sbjct: 740 QSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLN 798
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
VELAE A ++ EL+P + FV+LSNIY G WK+VA+++ M D G K PG S IE
Sbjct: 799 VELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Query: 540 VN 541
V+
Sbjct: 859 VD 860
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 221/464 (47%), Gaps = 17/464 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + SG++ ++ +I A+ A+++FD + +++V SWN + GY Q+
Sbjct: 131 RIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L QM + P+ TF +L +C + +G EL+ L+LK G+ ++FVGT
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT 250
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
ALI ++ I A KVF + R++V WTSMI G G A LF+ E
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT-------MLSGYANNGDVEECK 248
D + + +++ + + +K+ +M + + W+T +LS Y G +E+
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKE---VGWDTEIYVGTAILSMYTKCGSMEDAL 367
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ + RNV SW +I G+A +G E F +M+ G + PN T +++L AC+
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSP 426
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL + + + GY + V AL+ MYAKCG +++A VF + ++++ WN +I
Sbjct: 427 SALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMI 486
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ H + AL+ F + G P+ TF IL C +E G + + M +
Sbjct: 487 TAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGL 545
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ +V + G L A + MP + D V W ++
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIA 588
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 223/430 (51%), Gaps = 23/430 (5%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ +L+ C+K L +GE ++ + K+G + +IF+ LI +Y+ +A ++F +M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIE 215
E++V W ++ GY+ G A L E + P++ + ++++ D RN+ +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFV--SMLNACADARNVDK 229
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
R+L++ + K D+ +++ + GD+ + ++F+ +P R++ +W +I G A
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+G F + + F+RM EG V P+ V++L AC AL+ K VH + G+ +
Sbjct: 290 HGRFKQACNLFQRMEEEG-VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG A++ MY KCG +E+A++VF+ + +++++W +I+G A HGR A F++M +G
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF+ IL AC+ ++ G Q ++ ++ + A+ G L +A
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRG-QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSNIYG 509
+++ + + V W ++ + ++ + A + L + ++P N + F + N+
Sbjct: 468 HRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCK 525
Query: 510 -----DLGRW 514
+LG+W
Sbjct: 526 SSDSLELGKW 535
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 34/264 (12%)
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N ++ + G F E + +R + + T +L C + L + ++ + +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLER-VDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIK 137
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+G Q ++ + N LI+MYAKCG +A +F+ M KD+ +WN ++ G HG A
Sbjct: 138 KSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ---------------------- 420
L +M PD TF+ +L AC V++G +
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 421 --------SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP---IEADAVIWAN 469
+ D + + M+ LAR GR +A + +RM ++ D V + +
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 470 LLGSCRVYKNVELAELALERLTEL 493
LL +C + +E + R+ E+
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEV 341
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 296/541 (54%), Gaps = 69/541 (12%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T K L QI TQ++ +G + +++ ++++ + A K+F++I + + WN M
Sbjct: 29 DTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMI 88
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G++Q+E +V L+ +M + +A PN FT+ ++ C + LREGE++H V+ NG+
Sbjct: 89 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYC 148
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N+FV T S++N Y
Sbjct: 149 TNVFVRT-------------------------------SLVNLY---------------- 161
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
I GY VR +AR++FD++ ++++SWN++L+GY GDV+ +R+F+
Sbjct: 162 ---------AIAGGYDGVR---KARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFD 209
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPERNV SW +I G A G + L F M G V + +V LSACA LG L
Sbjct: 210 EMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGDLK 268
Query: 313 FSKWVHVYAEYNGYQGN----VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
W+H Y + + GN V + N+LI MYA CG+I+ A VF M + I+W ++I
Sbjct: 269 LGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMI 328
Query: 369 SGLAMHGRGAGALSLFHEMKNAGE---MPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+G A G AL +F M+ G PDGITFIG+LCAC+H G V++G +F+ M
Sbjct: 329 TGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKK 388
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ IVP+IEHYGCMVDLL+RAG L EA ++ MP++ + +W LLG CR++KN ELA
Sbjct: 389 WGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASH 448
Query: 486 ALERLT-ELEPKNPANF-VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
++L EL+P A + V+LSN+Y RW+DVA ++ M + G +K G S +++N V
Sbjct: 449 VAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGV 508
Query: 544 V 544
V
Sbjct: 509 V 509
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 90/234 (38%), Gaps = 11/234 (4%)
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++L C + L K +H NG+ + L+ Y G + NA VF ++
Sbjct: 23 SLLQTCDTIKKL---KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENP 79
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
WN +I G + + L++ M A P+ T+ ++ C L+ EG
Sbjct: 80 STTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREG-EQV 138
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM---PIEADAVIWANLLGSCRV 476
+ + +V+L A AG + V +R+ ++ + V W +LL
Sbjct: 139 HGRVVANGYCTNVFVRTSLVNLYAIAGGY-DGVRKARRVFDEIVDRNIVSWNSLLAGYVR 197
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+V+ A + + E +N ++ + +GR K + MR G K
Sbjct: 198 CGDVDGARRIFDEMPE---RNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVK 248
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 314/542 (57%), Gaps = 13/542 (2%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H E LE K +H +V G + Y+ I++ + M A ++FD + +NVVS
Sbjct: 324 HPEALEQGKKVHARMKEV---GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVS 380
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W AM G+AQ+ + F +M + PN TF +L +C +AL+ G+++ ++
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ G+ ++ V TAL+ +Y+ +++ A++VF ++ ++NVV W +MI Y+ +A
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + ++ + ++V ++ +L + + D+ N ++S +
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
N GD+ K LF +MP+R++ SWN +I G+ +G D FK M+ E + P+ T
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK-MMQESGIKPDKITFT 619
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+L+ACA AL + +H + +V VG LI MY KCG IE+A VF+ + K
Sbjct: 620 GLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK 679
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
++ +W ++I+G A HGRG AL LF++M+ G PD ITF+G L AC H GL+EEGL +F
Sbjct: 680 NVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHF 739
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
QSM +++I P++EHYGCMVDL RAG L EAV+F+ +M +E D+ +W LLG+C+V+ N
Sbjct: 740 QSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLN 798
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
VELAE A ++ EL+P + FV+LSNIY G WK+VA+++ M D G K PG S IE
Sbjct: 799 VELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Query: 540 VN 541
V+
Sbjct: 859 VD 860
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 221/464 (47%), Gaps = 17/464 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + SG++ ++ +I A+ A+++FD + +++V SWN + GY Q+
Sbjct: 131 RIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L QM + P+ TF +L +C + +G EL+ L+LK G+ ++FVGT
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT 250
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
ALI ++ I A KVF + R++V WTSMI G G A LF+ E
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT-------MLSGYANNGDVEECK 248
D + + +++ + + +K+ +M + + W+T +LS Y G +E+
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKE---VGWDTEIYVGTAILSMYTKCGSMEDAL 367
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ + RNV SW +I G+A +G E F +M+ G + PN T +++L AC+
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSP 426
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
AL + + + GY + V AL+ MYAKCG +++A VF + ++++ WN +I
Sbjct: 427 SALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMI 486
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ H + AL+ F + G P+ TF IL C +E G + + M +
Sbjct: 487 TAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGL 545
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ +V + G L A + MP + D V W ++
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIA 588
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 223/430 (51%), Gaps = 23/430 (5%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ +L+ C+K L +GE ++ + K+G + +IF+ LI +Y+ +A ++F +M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIE 215
E++V W ++ GY+ G A L E + P++ + ++++ D RN+ +
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFV--SMLNACADARNVDK 229
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
R+L++ + K D+ +++ + GD+ + ++F+ +P R++ +W +I G A
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+G F + + F+RM EG V P+ V++L AC AL+ K VH + G+ +
Sbjct: 290 HGRFKQACNLFQRMEEEG-VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG A++ MY KCG +E+A++VF+ + +++++W +I+G A HGR A F++M +G
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF+ IL AC+ ++ G Q ++ ++ + A+ G L +A
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRG-QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSNIYG 509
+++ + + V W ++ + ++ + A + L + ++P N + F + N+
Sbjct: 468 HRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCK 525
Query: 510 -----DLGRW 514
+LG+W
Sbjct: 526 SSDSLELGKW 535
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 34/264 (12%)
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N ++ + G F E + +R + + T +L C + L + ++ + +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLER-VDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIK 137
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+G Q ++ + N LI+MYAKCG +A +F+ M KD+ +WN ++ G HG A
Sbjct: 138 KSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ---------------------- 420
L +M PD TF+ +L AC V++G +
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 421 --------SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP---IEADAVIWAN 469
+ D + + M+ LAR GR +A + +RM ++ D V + +
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317
Query: 470 LLGSCRVYKNVELAELALERLTEL 493
LL +C + +E + R+ E+
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEV 341
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 308/538 (57%), Gaps = 56/538 (10%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACA----QLKQMTYARKMFDKITDQNVVSWN 69
T + L QI + SG + I+ CA + + YA K+F+++ +N SWN
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 70 AMFNGYAQNEFHRTVV--VLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
+ G+++++ + ++ LF +M + + PN FTFP VLK+C K ++EG+++H L
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LK GF + FV + L+ +Y + CG + AR
Sbjct: 155 LKYGFGGDEFVMSNLVRMY-------------------------------VMCGFMKDAR 183
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
LF +++I + +V M + RK +++ WN M+ GY GD +
Sbjct: 184 VLFY----KNIIEKDMVV--------MTDRRK-----RDGEIVLWNVMIDGYMRLGDCKA 226
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LF++M +R+V SWN +I GY+ NG F + ++ F+ M +G + PN T+V+VL A +
Sbjct: 227 ARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAIS 285
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
RLG+L+ +W+H+YAE +G + + +G+ALIDMY+KCGIIE A+ VF + +++ITW+
Sbjct: 286 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+G A+HG+ A+ F +M+ AG P + +I +L AC+H GLVEEG YF M
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ P+IEHYGCMVDLL R+G L EA +F+ MPI+ D VIW LLG+CR+ NVE+ +
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++ P + +V LSN+Y G W +V+ +++ M++ +K PGCS I+++ V+
Sbjct: 466 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVL 523
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 317/590 (53%), Gaps = 46/590 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIIT-----ACAQLKQMTYARKMFDKITDQNVVS 67
+T +H+ QI Q++ S ++ S+ + +++ + YA +F I +
Sbjct: 23 KTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTRF 82
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N + +++ + L+ +++ + F+FP +LK+ K++AL G E+H L
Sbjct: 83 SNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLAS 142
Query: 128 KNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
K GF A+ F+ +ALI +Y+ I A +F +M R+VV W MI+GY
Sbjct: 143 KFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVL 202
Query: 187 CLFE----LAPERDVILWNTIVSG-----------------------------------Y 207
L+E E D I+ T++S Y
Sbjct: 203 KLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMY 262
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ M AR+++DQ+P K ++ MLSGYA G V++ + +F+ M E+++ W+ +I
Sbjct: 263 ANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMIS 322
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GYA + E L F M R+ P+ T+++V+SACA +GAL +KW+H YA+ NG+
Sbjct: 323 GYAESYQPLEALQLFNEM-QRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFG 381
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ + NALIDMYAKCG + A +VF +M K++I+W+++I+ AMHG A++LFH M
Sbjct: 382 RTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRM 441
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
K P+G+TFIG+L AC+H GLVEEG +F SM ++ I PQ EHYGCMVDL RA
Sbjct: 442 KEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANH 501
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L +A++ ++ MP + +IW +L+ +C+ + +EL E A RL ELEP + V+LSNI
Sbjct: 502 LRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNI 561
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKS 557
Y RW DV ++ M+ G K CS IEVN V + ++ ++S
Sbjct: 562 YAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQS 611
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 299/526 (56%), Gaps = 55/526 (10%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ + Q+ + + + +++ R++ + ++ + YAR +FD+I ++++ WN +
Sbjct: 30 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 89
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
Y +N+F +VLF ++ + +P+ FT P V+K C ++ ++EG+++H L LK GF +
Sbjct: 90 CYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS 148
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
++FV +L+ +YS CG+I AR +F+
Sbjct: 149 DVFVQGSLVNMYS-------------------------------KCGEIDCARKVFDGMI 177
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
++DV+LWN+++ G +++SWN M++GY +GD + LF +
Sbjct: 178 DKDVVLWNSLIDG--------------------NLVSWNAMINGYMKSGDFDSALELFYQ 217
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP ++ +WN +I GY NG F + + F ML G P+ AT+V+VLSA + L L
Sbjct: 218 MPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSR-PSHATLVSVLSAVSGLAVLGK 276
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+W+H Y E NG++ + +G +LI+MYAKCG IE+A+ VF ++ K + W II GL +
Sbjct: 277 GRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGI 336
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG AL+LF EM G P+ I FIG+L AC H GLV++G YF M +Y I P +E
Sbjct: 337 HGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLE 396
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HYGC+VD+L RAG L EA + ++ MPI + VIW +LLG R + +++ E A +R+ E+
Sbjct: 397 HYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEV 456
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
P+ +++LSN+Y G W+ V+ ++ M GF+K PGCSS+E
Sbjct: 457 APETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVE 502
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 320/540 (59%), Gaps = 12/540 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ L+ + +H I V GL+ ++ ++ + +++ AR +FDK+ ++++V+W
Sbjct: 44 KNLQMGRLIHHI---VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWT 100
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+ +VLF +M++ +P+ V+ +C K+ A+ + + + +
Sbjct: 101 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 160
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
F+ ++ +GTA+I++Y+ +E+A ++F M+E+NV+ W++MI Y G A LF
Sbjct: 161 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 220
Query: 190 ELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANN 241
+ D I +++ D++N+ R + + K D ++ Y
Sbjct: 221 RMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 280
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
++E+ + LF++MPER++ +W +IGGYA G E L F +M EG V P+ +VTV
Sbjct: 281 REIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG-VVPDKVAMVTV 339
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+ ACA+LGA+ ++ + Y + +Q +V +G A+IDM+AKCG +E+A ++F+ M+ K++
Sbjct: 340 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 399
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
I+W+ +I+ HG+G AL LF M +G +P+ IT + +L AC+H GLVEEGL +F
Sbjct: 400 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSL 459
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M DYS+ ++HY C+VDLL RAGRL EA+ ++ M +E D +W LG+CR +K+V
Sbjct: 460 MWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVV 519
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAE A L EL+P+NP ++++LSNIY + GRW+DVA+ + M KK+PG + IEV+
Sbjct: 520 LAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVD 579
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 209/414 (50%), Gaps = 17/414 (4%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G+A+ + F ++ + A P+ +T P V+++C + L+ G +H +V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ FV AL+++Y + IE A +F +M ER++V WT MI GY CG + LFE
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 191 LAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNG 242
E D + T+V + M +AR + D + +K DVI M+ YA G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
VE + +F+ M E+NV SW+ +I Y +G + LD F+ ML+ G + P+ T+ ++L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSG-MLPDKITLASLL 239
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
AC+ L L + +H G + V AL+DMY KC IE+A +F+ M +DL+
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS---YF 419
TW +I G A G +L LF +M+ G +PD + + ++ AC +G + + + Y
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
Q ++ M+D+ A+ G + A + RM E + + W+ ++ +
Sbjct: 360 QRKKFQLDVILGT----AMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAA 408
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 324/557 (58%), Gaps = 26/557 (4%)
Query: 5 TGAHSEQ-----LETTKH---LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKM 56
+G HS+ ++++ H L QI +++ GL+ S ++ ++I A + +T+AR++
Sbjct: 16 SGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQV 75
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
FD + V WNA+ GY++N + ++++++M+ P+ FTFP +LK+C ++ L
Sbjct: 76 FDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHL 135
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMIN 174
+ G +H V + GF A++FV LI LY+ + + A VF + ER +V WT++++
Sbjct: 136 QMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVS 195
Query: 175 GYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDV-- 228
Y G+ V A +F + DV + ++++ + ++++ + R + + K +
Sbjct: 196 AYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLET 255
Query: 229 -----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
IS NTM YA G V K LF++M N+ WN +I GYA NG + +D F
Sbjct: 256 EPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFH 312
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
M+ + V P+ +I + +SACA++G+L+ ++W+ Y + Y+ +V + +ALIDM+AKC
Sbjct: 313 EMINKD-VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKC 371
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G +E A VF+ +D++ W+ +I G +HG+ A+SL+ M+ G P+ +TF+G+L
Sbjct: 372 GSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC H G+V EG +F MA D+ I PQ +HY C++DLL RAG L +A + +K MP++
Sbjct: 432 IACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
+W LL +C+ +++VEL + A ++L ++P N ++V LSN+Y W VA ++V
Sbjct: 491 VTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 524 MRDTGFKKLPGCSSIEV 540
M++ G K GCS +EV
Sbjct: 551 MKEKGLNKDVGCSWVEV 567
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 262/421 (62%), Gaps = 9/421 (2%)
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV----VWTSMINGYISCGDIVSARC 187
+ FV + ++ + G + A +F + + +V +S++ ++ D+ + R
Sbjct: 90 KPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRI 149
Query: 188 LF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
L ++ ++ L N IV Y M EAR LF++MP++DV++WN M++ GD
Sbjct: 150 LHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGD 209
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
E LF MPERNV SW +I GY G E + F +M E V N+ T+V VL+
Sbjct: 210 HEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM-EEAGVKCNEVTVVAVLA 268
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA LGALD +H Y+ +G++ NV + N LIDMY KCG +E A VF M+ + +++
Sbjct: 269 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 328
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W+ +I GLAMHGR AL LF +M G P+G+TFIG+L AC+HMGL+ EG +F SM
Sbjct: 329 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 388
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
DY I+PQIEHYGCMVDLL+RAG L EA +F+ MP++ + V+W LLG+CRV+KNVE+A
Sbjct: 389 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E A++ L EL+P N +V+LSNIY + GRW+D AR++ M+D KK PG SSI V+ V
Sbjct: 449 EEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGV 508
Query: 544 V 544
V
Sbjct: 509 V 509
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 184/404 (45%), Gaps = 52/404 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS--WNAMFNGY 75
L Q+ Q++ + S R+ CA YA+++F+ + Q + WN+
Sbjct: 44 LRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKAL 103
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
A+ + ++LF ++++ D P+ FT VL++C+ + L G LH +V K GFR+N+
Sbjct: 104 AEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNL 163
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
++ ++ LY++ + A +F +M +R+VV W MI I GD A LF PER
Sbjct: 164 YLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPER 223
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP------------------------------- 224
+V W ++++GY+ EA LF +M
Sbjct: 224 NVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 283
Query: 225 --------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
K++V NT++ Y G +EE ++FEEM ER V SW+ +IGG A +G
Sbjct: 284 EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAE 343
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVC 331
E L F M G + PN T + +L AC+ +G + F+ Y + C
Sbjct: 344 EALRLFSDMSQVG-IEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC 402
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
++D+ ++ G++ A + +M K + + W ++ +H
Sbjct: 403 ----MVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVH 442
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 306/575 (53%), Gaps = 80/575 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q + K L QI Q++T+ + K + +I A LK YA F I D S+N
Sbjct: 40 QQCLSIKQLKQIHAQLLTNSIHKPNSFLYKI----ADLKDFAYASVFFSNILDPTEYSFN 95
Query: 70 AMFNGYAQNEFHRTVVVL--FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
M G + ++++ + L +++MK L PN T+P + +C + A+ G HC V+
Sbjct: 96 VMIRGLS-TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVI 154
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---------- 177
+ G + V +LI +Y+ + A KVF E+ ++++V W SMI+GY
Sbjct: 155 RRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVG 214
Query: 178 ----------------------SC---GDIVSARCLFELAPERDVIL----WNTIVSGYI 208
+C GD+ + E E + L + ++ Y
Sbjct: 215 LFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYG 274
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+++ AR++FD M KKD ++WN M++GYA NG EE +LF++M
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM-------------- 320
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
RM + P+ T++ +LSACA +GALD K V +YA G+Q
Sbjct: 321 ---------------RMSSTA---PDQITLIGILSACASIGALDLGKQVEIYASERGFQD 362
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+V VG AL+DMYAKCG ++NA VF M K+ ++WN +IS LA HG+ AL+LF M
Sbjct: 363 DVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMM 422
Query: 389 NAGEM--PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
N G P+ ITF+G+L AC H GLV+EG F M+ + +VP+IEHY CMVDL +RAG
Sbjct: 423 NEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAG 482
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
L EA DFV MP + D VI LLG+C+ KN++++E ++ L ELEP N N+V+ S
Sbjct: 483 HLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSK 542
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y +L RW D AR+++ M+ G K PGCS I++N
Sbjct: 543 LYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIN 577
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 13/280 (4%)
Query: 193 PERDVI--LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R + +N+++ + ++ + +++ Q+ + N+ L A+ D
Sbjct: 26 PNRQALSDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVF 82
Query: 251 FEEMPERNVFSWNGLIGGYA---NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
F + + +S+N +I G + N L+ + RM G + PN+ T + AC+
Sbjct: 83 FSNILDPTEYSFNVMIRGLSTAWNKSSL--ALEFYSRMKFLG-LKPNNLTYPFLFIACSN 139
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L A++ + H G + V ++LI MYA+CG + +A VF+ + KDL++WN++
Sbjct: 140 LLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISG + A+ LF EM AG P+ ++ + +L AC +G ++ G ++ + ++
Sbjct: 200 ISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLG-TWVEEFVVENK 258
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ ++ + + G L A M + D V W
Sbjct: 259 MTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTW 297
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 296/535 (55%), Gaps = 42/535 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCV 111
A ++F + ++N VS+NA+ GY Q + L+ M+ D + P+ FTF +L C
Sbjct: 431 AHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+G ++H +++ NI V T L+ +YS + A ++F M ERN W S
Sbjct: 491 NQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNS 550
Query: 172 MINGYISCGDIVSARCLFE------LAP-------------------------------- 193
MI GY G+ A LF+ + P
Sbjct: 551 MIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT 610
Query: 194 -ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
E + IL +V Y +M A K++DQ KKDVI N M+S + N+G + K LF+
Sbjct: 611 MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFD 670
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+M +RN WN ++ GYAN GL E + F ML E + + T+VT+++ C+ L AL+
Sbjct: 671 QMEQRNTALWNSILAGYANKGLKKESFNHFLEML-ESDIEYDVLTMVTIVNLCSSLPALE 729
Query: 313 FSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+H G+ +V + AL+DMY+KCG I A VF++M+ K++++WN +ISG
Sbjct: 730 HGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGY 789
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ HG AL L+ EM G P+ +TF+ IL AC+H GLVEEGL F SM DY+I +
Sbjct: 790 SKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAK 849
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
EHY CMVDLL RAGRL +A +FV++MPIE + W LLG+CRV+K++++ LA +RL
Sbjct: 850 AEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLF 909
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
EL+P+NP +V++SNIY GRWK+V I+ M+ G KK PG S IE+N + +
Sbjct: 910 ELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQI 964
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 232/463 (50%), Gaps = 15/463 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQ---LKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
I TQ++++G Y+ +I+ A+ L + YARK+F+++ ++N+ +WN M YA+
Sbjct: 93 IHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYAR 152
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ + V+ L+ +M+ + FTFP V+K+C+ + + +L V+K G N+FV
Sbjct: 153 VDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFV 212
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
G AL++ Y+ ++ A E++ +VV W ++I GY+ A +F+ + V
Sbjct: 213 GGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGV 272
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKK--------DVISWNTMLSGYANNGDVEECKR 249
N + + V + +R Q+ K D N ++ YA D E C +
Sbjct: 273 CPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLK 332
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+EM ERN +WN +I A G F + L F RM G N + ++L A A L
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYK-SNRFNLGSILMASAGLA 391
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ + +H + N ++ +G+AL+DMY+KCG++E A VF S+ ++ +++N +++
Sbjct: 392 DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLA 451
Query: 370 GLAMHGRGAGALSLFHEMKNA-GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G G+ AL L+H+M++ G PD TF +L C + +G + + +I
Sbjct: 452 GYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQ-IHAHLIRANI 510
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
I +V + + GRL A + RM E +A W +++
Sbjct: 511 TKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMI 552
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 240/499 (48%), Gaps = 19/499 (3%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+E + Q+Q+ VV +GL + ++ ++ A+ M A D+I +VV+WNA+
Sbjct: 188 MEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GY + +F +M K+ P+ FTF L+ C + + G+++H ++ GF
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 307
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-- 189
+ + FVG ALI++Y+ E+ KVF EM ERN V W S+I+ G A LF
Sbjct: 308 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 367
Query: 190 --ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGD 243
E + + +I+ + ++ + R+L + + D+I + ++ Y+ G
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
VEE ++F + ERN S+N L+ GY G E L+ + M +E + P+ T T+L+
Sbjct: 428 VEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
CA + + +H + N+ V L+ MY++CG + A ++FN M ++ +
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS 547
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQ 420
WN++I G +G AL LF +M+ G PD + +L +C + ++G ++
Sbjct: 548 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV 607
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M+ + Q+ +VD+ A+ G + A V I+ D VI N++ S V N
Sbjct: 608 RNTMEEEGILQV----VLVDMYAKCGSMDYAWK-VYDQTIKKD-VILNNVMVSAFV--NS 659
Query: 481 ELAELALERLTELEPKNPA 499
A A ++E +N A
Sbjct: 660 GRANDAKNLFDQMEQRNTA 678
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 198/398 (49%), Gaps = 45/398 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI ++ + + K+ + ++ ++ ++ YA+++F+++ ++N SWN+M GY QN
Sbjct: 500 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF QM+ P+CF+ +L SCV ++ ++G ELH +++N +
Sbjct: 560 ETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV 619
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
L+++Y+ +++ A+KV+ + +++V++ M++ +++ G A+ LF+ +R+ L
Sbjct: 620 VLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTAL 679
Query: 200 WNTIVSGY----------------------IDVRNMIEARKLFDQMP------------- 224
WN+I++GY DV M+ L +P
Sbjct: 680 WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLII 739
Query: 225 KKDVISWNTMLSG-----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
KK ++ + +L Y+ G + + + +F+ M +N+ SWN +I GY+ +G E L
Sbjct: 740 KKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEAL 799
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVCVGNALI 337
++ M +G ++PN+ T + +LSAC+ G ++ + + +YN + ++
Sbjct: 800 ILYEEMPKKG-MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYN-IEAKAEHYTCMV 857
Query: 338 DMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
D+ + G +E+A + M + ++ TW ++ +H
Sbjct: 858 DLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH 895
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 193/410 (47%), Gaps = 17/410 (4%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA---AY 155
N + +++ C+ N+ + G+ +H ++ NG+ + ++ T ++ LY+ ++ A
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVR 211
K+F EM ERN+ W +MI Y D + L+ D + +++ I +
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189
Query: 212 NMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+M R+L + K ++ ++ GYA G +++ +E+ +V +WN +I
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY + E F RML G V P++ T + L C L + D K VH G++
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIG-VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK 308
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
G+ VGNALIDMYAKC E+ + VF+ M ++ +TWN+IIS A G AL LF M
Sbjct: 309 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 368
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ +G + IL A + + +G + + + I +VD+ ++ G
Sbjct: 369 QESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGM 427
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+ EA V R +E + V + LL Y AE ALE +++ ++
Sbjct: 428 VEEAHQ-VFRSLLERNEVSYNALLAG---YVQEGKAEEALELYHDMQSED 473
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/496 (37%), Positives = 295/496 (59%), Gaps = 17/496 (3%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL-DAMP--NCFTFPIVLKS 109
AR++FD++ ++ VSWN++ GY +N F + K+L MP N ++ ++
Sbjct: 66 ARQLFDEMPHRDTVSWNSIITGYWKNG-------CFDESKRLFGLMPTKNVVSWNSMIAG 118
Query: 110 CVKINALREG-EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
C++ + E + + +N N A+I +E A ++F EM RNV+
Sbjct: 119 CIEDERIDEAWQYFQAMPQRNTASWN-----AMISGLVRYDRVEEASRLFEEMPRRNVIS 173
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
+T+M++GY G+I AR LF P+++V+ W ++SGY++ EA LF+QMP K++
Sbjct: 174 YTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
++ M++GY G ++ K LF+++P R++ SWN +I GYA NG E L +ML
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM 293
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G + P+ +T+++VL+AC+ L +L + HV +GY+ + + NALI MY KCG I +
Sbjct: 294 G-MQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILD 352
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
+ F +D D+++WN +I+ A HG AL+ F EM++ PDGITF+ +L AC H
Sbjct: 353 SELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGH 412
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G V E L++F SM Y IVP+ EH+ C+VD+L+R G++ +A ++ MP EAD IW
Sbjct: 413 AGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWG 472
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LL +C V+ NV+L ELA +++ ELEP+N +V+LSNIY G W +V R++ MR+ G
Sbjct: 473 ALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQG 532
Query: 529 FKKLPGCSSIEVNEVV 544
KK P S +E++ V
Sbjct: 533 VKKQPAYSWMEIDNKV 548
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 150/295 (50%), Gaps = 9/295 (3%)
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+ H L +K +++ I + I AA ++F EM R+ V W S+I GY G
Sbjct: 33 QFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNG 92
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
++ LF L P ++V+ WN++++G I+ + EA + F MP+++ SWN M+SG
Sbjct: 93 CFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVR 152
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
VEE RLFEEMP RNV S+ ++ GYA G + F M + N +
Sbjct: 153 YDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQK-----NVVSWTV 207
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
++S G D ++ +++ + N+ A+I Y K G + A +F+ + +D
Sbjct: 208 MISGYVENGKFDEAE--NLFEQMP--DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
L +WN +I+G A +G G AL L +M G PD T I +L AC+ + ++EG
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEG 318
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT + + A+ +FD+I +++ SWNAM GYAQN + L +QM K+ P+
Sbjct: 239 MITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 298
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C + +L+EG + H LVLK+G+ + I + ALI +Y +I + F
Sbjct: 299 HSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFR 358
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPER---DVILWNTIVSGYIDVRNMIE 215
++D +VV W +MI + G A F E+ R D I + +++S + E
Sbjct: 359 QIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHE 418
Query: 216 ARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
+ F+ M P+ + + ++ + G VE+ ++ +EMP E + W L+
Sbjct: 419 SLNWFNSMIESYKIVPRPEHFA--CLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLA 476
Query: 268 G 268
Sbjct: 477 A 477
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 141/351 (40%), Gaps = 62/351 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A++ ++ AR +F+ + +NVVSW M +GY +N LF QM
Sbjct: 177 MVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPD------ 230
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
NI TA+I Y + A +F
Sbjct: 231 ---------------------------------KNIVAMTAMITGYCKEGKTDKAKILFD 257
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNM 213
++ R++ W +MI GY G A L + P+ ++ ++++ + ++
Sbjct: 258 QIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLI--SVLTACSSLASL 315
Query: 214 IEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
E RK + K S N +++ Y G + + + F ++ +V SWN +I +
Sbjct: 316 QEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAF 375
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYN 324
A +G + L +F M + RV P+ T +++LSAC G + F+ + Y
Sbjct: 376 ARHGFYDRALASFGEMRS-NRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVP 434
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ C L+D+ ++ G +E A + M + D W +++ +H
Sbjct: 435 RPEHFAC----LVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVH 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + + + V+ SG E I +IT + + + F +I +VVSWNAM
Sbjct: 312 LASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAM 371
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNG 130
+A++ F+ + F +M+ P+ TF +L +C + E + ++
Sbjct: 372 IAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYK 431
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLF 189
L+++ S G +E AYK+ EM E + +W +++ +C ++ + L
Sbjct: 432 IVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALL---AACHVHLNVK-LG 487
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
ELA ++ V L Y+ + N+ A ++ ++ +
Sbjct: 488 ELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTR 523
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 306/575 (53%), Gaps = 80/575 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q + K L QI Q++T+ + K + +I A LK YA F I D S+N
Sbjct: 40 QQCLSIKQLKQIHAQLLTNSIHKPNSFLYKI----ADLKDFAYASVFFSNILDPTEYSFN 95
Query: 70 AMFNGYAQNEFHRTVVVL--FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
M G + ++++ + L +++MK L PN T+P + +C + A+ G HC V+
Sbjct: 96 VMIRGLS-TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVI 154
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---------- 177
+ G + V +LI +Y+ + A KVF E+ ++++V W SMI+GY
Sbjct: 155 RRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVG 214
Query: 178 ----------------------SC---GDIVSARCLFELAPERDVIL----WNTIVSGYI 208
+C GD+ + E E + L + ++ Y
Sbjct: 215 LFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYG 274
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+++ AR++FD M KKD ++WN M++GYA NG EE +LF++M
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDM-------------- 320
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
RM + P+ T++ +LSACA +GALD K V +YA G+Q
Sbjct: 321 ---------------RMSSTA---PDQITLIGILSACASIGALDLGKQVEIYASERGFQD 362
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+V VG AL+DMYAKCG ++NA VF M K+ ++WN +IS LA HG+ AL+LF M
Sbjct: 363 DVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMM 422
Query: 389 NAGEM--PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
N G P+ ITF+G+L AC H GLV+EG F M+ + +VP+IEHY CMVDL +RAG
Sbjct: 423 NEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAG 482
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
L EA DFV MP + D VI LLG+C+ KN++++E ++ L ELEP N N+V+ S
Sbjct: 483 HLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSK 542
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y +L RW D AR+++ M+ G K PGCS I++N
Sbjct: 543 LYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIN 577
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 13/280 (4%)
Query: 193 PERDVI--LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R + +N+++ + ++ + +++ Q+ + N+ L A+ D
Sbjct: 26 PNRQALSDKFNSLLQQCLSIKQL---KQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVF 82
Query: 251 FEEMPERNVFSWNGLIGGYA---NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
F + + +S+N +I G + N L+ + RM G + PN+ T + AC+
Sbjct: 83 FSNILDPTEYSFNVMIRGLSTAWNKSSL--ALEFYSRMKFLG-LKPNNLTYPFLFIACSN 139
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L A++ + H G + V ++LI MYA+CG + +A VF+ + KDL++WN++
Sbjct: 140 LLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISG + A+ LF EM AG P+ ++ + +L AC +G ++ G ++ + ++
Sbjct: 200 ISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLG-TWVEEFVVENK 258
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ ++ + + G L A M + D V W
Sbjct: 259 MTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTW 297
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 301/575 (52%), Gaps = 71/575 (12%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L L I +++ L++ +Y+ I+ Y++ +F ++ + N+ W
Sbjct: 23 SNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLW 82
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N M G + + L+ M+ +PN FT P VLK+C + +R G ++H L++K
Sbjct: 83 NTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK 142
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G+ ++FV T+L+ LY + A KVF ++ ++NVV WT++I GYIS G A
Sbjct: 143 AGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGA 202
Query: 189 FE------LAPE---------------------------------RDVILWNTIVSGYID 209
F+ L P+ R+V + +++ Y+
Sbjct: 203 FKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVK 262
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
N+ A +F MP+KD++SW+TM+ GYA NG +P+
Sbjct: 263 CGNLERANLIFSAMPEKDIVSWSTMIQGYAFNG-----------LPQ------------- 298
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
+ LD F +M +E + P+ T+V VLSACA LGALD W + N + N
Sbjct: 299 -------QALDLFFQMQSE-NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN 350
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+G ALIDMY+KCG + A ++F +M KD + WN ++ GL+M+G SLF ++
Sbjct: 351 PVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G PD TFIG+LC CTH G V EG +F +M +S+ P IEHYGCMVDLL RAG L
Sbjct: 411 HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLN 470
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA + MP++ +AV+W LLG C+++K+ LAE L++L ELEP N N+V LSNIY
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYS 530
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RW++ +I+ M++ +K+ CS IE++ +V
Sbjct: 531 GNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIV 565
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/566 (35%), Positives = 315/566 (55%), Gaps = 47/566 (8%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+H H I+T + S+ I ++ + L + +A F +I ++ +N + G
Sbjct: 76 QHAHLIRTHHHKNPKSMSNVIKSYALSR-SHLNKANFA---FIQIGQPTLLIFNYLIRGL 131
Query: 76 AQNEFHRTVVVLFTQ-MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+Q+E +V+++ M + + TF + K+C ++ + G+ H VLK GF +
Sbjct: 132 SQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSY 191
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+F+ +LI +Y + A KVF +MD+R++V W S+I GY C LF L E
Sbjct: 192 LFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMRE 251
Query: 195 R---------------------------------------DVILWNTIVSGYIDVRNMIE 215
DV L N+++ Y R +++
Sbjct: 252 ANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMY-GRRGLVD 310
Query: 216 -ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
AR++FD+M +K+++SWN ML+GYA GD+ K+LF EMP RNV SW +I G A
Sbjct: 311 LARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQ 370
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ L F+ M+ + V P++ T+ +VLSAC+ LG LD + VH Y + + +V VGN
Sbjct: 371 CSDALKLFQEMM-DANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGN 429
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALIDMY KCG+++ A++VF+ M KD ++W ++I GLA++G LF +M G P
Sbjct: 430 ALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQP 489
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
+FIGIL ACTH GLV++GL YF+SM Y + P+++HYGC+VDLL+R+G L A +F
Sbjct: 490 THGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEF 549
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
+K+MP+ D V+W LL +C++++N+ LAE+A +L EL+P N N+V+LSN Y RW
Sbjct: 550 IKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRW 609
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEV 540
D +R++ M +K SSIEV
Sbjct: 610 DDASRMRDLMVVGDVQKPSSWSSIEV 635
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 322/582 (55%), Gaps = 67/582 (11%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWNAMFNGYAQNEFH 81
+ +G E + +I ++ ++ + A +FD+IT + +V+SWN++ + + ++
Sbjct: 181 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 240
Query: 82 RTVVVLFTQM------KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
T + LF++M K + + + +L +C + A+ + +E+H ++NG ++
Sbjct: 241 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV 300
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG ALI+ Y+ +E A KVF M+ ++VV W +M+ GY G+ +A LF+ +
Sbjct: 301 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 360
Query: 196 ----DVILWNTIVSGYIDVRNMIEARKLFDQM---------------------------- 223
DV+ W +++GY EA LF QM
Sbjct: 361 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 420
Query: 224 ---------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP--ERNVF 260
+D++ +N ++ Y+ + + +F+++P ERNV
Sbjct: 421 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 480
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWVHV 319
+W +IGG+A G + L F M++E V PN TI +L ACA L A+ K +H
Sbjct: 481 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 540
Query: 320 YA-EYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
Y ++ Y+ + V N LIDMY+KCG ++ A VF+SM K I+W ++++G MHGRG
Sbjct: 541 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 600
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ AL +F +M+ AG +PD ITF+ +L AC+H G+V++GLSYF SM+ DY + P+ EHY C
Sbjct: 601 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 660
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+DLLAR+GRL +A VK MP+E AV+W LL +CRV+ NVELAE AL +L E+ +N
Sbjct: 661 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 720
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++ ++SNIY GRWKDVARI+ M+ +G KK PGCS ++
Sbjct: 721 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 762
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 141/550 (25%), Positives = 253/550 (46%), Gaps = 91/550 (16%)
Query: 10 EQLETTKHLHQIQTQVVTSG---------------LEKSDYITPR-----IITACAQLKQ 49
++ ++ +HQI Q++ SG L +I+PR ++ +
Sbjct: 45 KECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACGA 104
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
YA + +++T V WN + + + + + + +M + P+ FT P VLK+
Sbjct: 105 TDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKA 164
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER---NV 166
C ++ + R G H L+ NGF +N+F+ AL+ +YS ++E A +F E+ +R +V
Sbjct: 165 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 224
Query: 167 VVWTSMINGYISCGDIVSARCLF-------------------------------ELAPER 195
+ W S+++ ++ + +A LF + P+
Sbjct: 225 ISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQT 284
Query: 196 --------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
DV + N ++ Y M A K+F+ M KDV+SWN M++GY+ +
Sbjct: 285 KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS 344
Query: 242 GDVEECKRLFEEMPERN----VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
G+ E LF+ M + N V +W +I GY+ G E L+ F++M+ G + PN T
Sbjct: 345 GNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL-PNCVT 403
Query: 298 IVTVLSACARLGALDFSKWVHVYA----------EYNGYQGNVCVGNALIDMYAKCGIIE 347
I++VLSACA LGA +H Y+ ++ G ++ V NALIDMY+KC +
Sbjct: 404 IISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFK 463
Query: 348 NAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAGEMPDGITFIGIL 403
A +F+ ++ ++++TW +I G A +G AL LF EM + G P+ T IL
Sbjct: 464 AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCIL 523
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIE 461
AC H+ + G + + + ++ C++D+ ++ G + A M +
Sbjct: 524 MACAHLAAIRIG-KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-Q 581
Query: 462 ADAVIWANLL 471
A+ W +++
Sbjct: 582 KSAISWTSMM 591
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 284/509 (55%), Gaps = 40/509 (7%)
Query: 36 ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
+ P TA Q YA +MF +I + WN G +Q+ V L+ QM
Sbjct: 48 VGPAATTAVTQ-----YAVQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRS 102
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
P+ FTFP+VLK+C K+ + G +H V + GF +N+ V L+ ++
Sbjct: 103 VKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHA--------- 153
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
CGD+ A +F+ + + DV+ W+ +++GY ++
Sbjct: 154 ----------------------KCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSV 191
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
ARKLFD+MPK+D++SWN M++ Y +G++E +RLF+E P ++V SWN ++GGY + L
Sbjct: 192 ARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLN 251
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV-YAEYNGYQGNVCVGN 334
E L+ F M G P++ T++++LSACA LG D + VH E N + + +GN
Sbjct: 252 QEALELFDEMCEVGEC-PDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTLLGN 308
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
AL+DMYAKCG I V VF + KD+++WN++I GLA HG +L LF EM+ P
Sbjct: 309 ALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCP 368
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ITF+G+L AC+H G V+EG YF M Y I P I H GC+VD+LARAG L EA DF
Sbjct: 369 DEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDF 428
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
+ M IE +A++W +LLG+C+V+ +VELA+ A E+L + ++V+LSN+Y G W
Sbjct: 429 IASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEW 488
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
++ M D G K G S +E +
Sbjct: 489 DGAENVRKLMDDNGVTKTRGSSFVEAYRI 517
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
I D+++VSWN++ G A + + LF +M++ P+ TF VL +C + EG
Sbjct: 330 IRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAACSHTGNVDEG 389
Query: 120 EELHCLVLKNGFR--ANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGY 176
L +KN ++ NI ++++ + ++ A+ M E N +VW S++
Sbjct: 390 NRYFYL-MKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKIEPNAIVWRSLLGAC 448
Query: 177 ISCGDI-VSARCLFELAPER-----DVILWNTIVSGYIDVRNMIEARKLFDQ-------- 222
GD+ ++ R +L R D +L + + + + + RKL D
Sbjct: 449 KVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDDNGVTKTRG 508
Query: 223 -------MPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+ + ++ T+L GDVE KR+ EE+
Sbjct: 509 SSFVEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEEL 547
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNV--------CVGNALIDMYAKCGIIENAVDVFN 354
S LG L + +H NG+ NV +++ A + + AV +F
Sbjct: 9 STITNLGTL---RQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFA 65
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ D WNT I G + A++L+ +M + PD TF +L ACT + V
Sbjct: 66 QIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNT 125
Query: 415 G 415
G
Sbjct: 126 G 126
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 294/512 (57%), Gaps = 40/512 (7%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
++ +W + Y R ++++T +++ + P+VLK+C ++ ++ G+ LH
Sbjct: 59 SLSNWCHLIRSYLSQGAPREALLVYTGLRR-KGVYLLGVAPLVLKACASLSIVKHGKALH 117
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+KNG ++ +GT+L+ +Y+ + + KVF M ERN V W +MI GY+ GD
Sbjct: 118 AESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSK 177
Query: 184 SARCLFEL---------------------------------APERDVILWNTIVSGYIDV 210
SA LFE + R+V+ W +V GY
Sbjct: 178 SAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARN 237
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
M AR++F+ MP+++ +W++M+SGY G+V+E + +F+ +P RN+ +WN LI GYA
Sbjct: 238 AEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYA 297
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
NG E L+AF +M EG P++ TI +VLSAC++LG LD K +H + G + N
Sbjct: 298 QNGFSEEALEAFGKMQAEG-FEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQ 356
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N L+DMYAKCG + NA +F M ++ WN++ISG A+HG+ AL F M+++
Sbjct: 357 FVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDS 416
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
E PD ITF+ +L AC H G V GL F M Y + I+HYGC++DLL RAGR+ E
Sbjct: 417 HEGPDEITFLSVLSACAHGGFVNAGLEIFSRME-KYGLTTGIKHYGCLIDLLGRAGRIKE 475
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK----NPANFVMLSN 506
A D +KRMP++ + V+W LLG+CRV+ ++E+A+ +E + +++ +++V+LSN
Sbjct: 476 AYDLIKRMPVKPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSN 535
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
IY RW+ ++++ M + GF+K GCSSI
Sbjct: 536 IYAASDRWEKAEKMRMEMANKGFQKTSGCSSI 567
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 35/270 (12%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ + + AR +FD+I +N+V+WN++ +GYAQN F + F +M+ P+
Sbjct: 261 MISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPD 320
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C ++ L G+++H ++ G + N FV L+++Y+ + A +F
Sbjct: 321 EVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFE 380
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M RN W SMI+G+ G A F ++
Sbjct: 381 GMAHRNRACWNSMISGFAIHGQSKEALEFFG---------------------------RM 413
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS----WNGLIGGYANNGLF 275
D D I++ ++LS A+ G V +F M + + + + LI G
Sbjct: 414 EDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRI 473
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E D KRM V PND +L AC
Sbjct: 474 KEAYDLIKRM----PVKPNDVVWGALLGAC 499
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K +H + G++ + ++ ++ A+ + AR +F+ + +N WN+M
Sbjct: 337 LDAGKKIHHMMNH---KGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSM 393
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+G+A + + + F +M+ P+ TF VL +C + G E+ + K G
Sbjct: 394 ISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEKYGL 453
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMI 173
I LI+L I+ AY + M + N VVW +++
Sbjct: 454 TTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALL 496
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 301/575 (52%), Gaps = 71/575 (12%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L L I +++ L++ +Y+ I+ Y++ +F ++ + N+ W
Sbjct: 23 SNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLW 82
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N M G + + L+ M+ +PN FT P VLK+C + +R G ++H L++K
Sbjct: 83 NTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVK 142
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G+ ++FV T+L+ LY + A KVF ++ ++NVV WT++I GYIS G A
Sbjct: 143 AGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGA 202
Query: 189 FE------LAPE---------------------------------RDVILWNTIVSGYID 209
F+ L P+ R+V + +++ Y+
Sbjct: 203 FKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVK 262
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
N+ A +F MP+KD++SW+TM+ GYA NG +P+
Sbjct: 263 CGNLERANLIFSAMPEKDIVSWSTMIQGYAFNG-----------LPQ------------- 298
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
+ LD F +M +E + P+ T+V VLSACA LGALD W + N + N
Sbjct: 299 -------QALDLFFQMQSE-NLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN 350
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+G ALIDMY+KCG + A ++F +M KD + WN ++ GL+M+G SLF ++
Sbjct: 351 PVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G PD TFIG+LC CTH G V EG +F +M +S+ P IEHYGCMVDLL RAG L
Sbjct: 411 HGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLN 470
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA + MP++ +AV+W LLG C+++K+ LAE L++L ELEP N N+V LSNIY
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYS 530
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RW++ +I+ M++ +K+ CS IE++ +V
Sbjct: 531 GNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIV 565
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 308/533 (57%), Gaps = 10/533 (1%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL+QI +++ +GL+ ++ +++ + + +++ ARK+FDK D +V WNA+ Y+
Sbjct: 90 HLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYS 149
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
++ F + ++ +M+ P+ F+FP VLK+C + AL G +H + ++GF +++F
Sbjct: 150 RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVF 209
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V L+ LY+ I A VFG + +R +V WTS+I+GY G + A +F + +
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269
Query: 197 V----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML----SGYANNGDVEECK 248
V I +++ Y DV ++ + + + K + +L S YA G V +
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVAR 329
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
F ++ ++ WN +I GY NG E ++ F R++ + P+ T+ + ++ACA++
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAEEAIELF-RLMKSKNIRPDSITVTSSIAACAQI 388
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
G+L+ ++W+ Y + ++ +V V +LID YAKCG ++ A VF+ + KD++ W+ ++
Sbjct: 389 GSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMM 448
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G +HG+G ++ LFH M+ AG P+ +TF+G+L AC + GLVEEG F M DY I
Sbjct: 449 VGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGI 507
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P+ +HY C+VDLL RAG L A +FV MPIE +W LL +C+++++V L E A E
Sbjct: 508 EPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAE 567
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RL L+P N ++V LSN+Y W VA+++V MR+ G K G S IE+N
Sbjct: 568 RLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEIN 620
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+E +H I V+ GLE + + + A+ + AR F+++ + +++ WNAM
Sbjct: 287 VEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAM 346
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY +N + + LF MK + P+ T + +C +I +L + + + F
Sbjct: 347 ISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEF 406
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
R ++ V T+LI+ Y+ +++ A VF + +++VVVW++M+ GY
Sbjct: 407 RNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY 451
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 303/537 (56%), Gaps = 16/537 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
KHL Q+ Q++ SGL K ++ + I AC + YA K F ++++ +++ WNA+ GY
Sbjct: 16 KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 75
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
Q + ++ M+ PNCFTF VLK+C + G+++H K GF +N+
Sbjct: 76 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 135
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----EL 191
FV +L+ +Y+ I A VF ++ +R VV WTS+I+GY+ GD + A +F +
Sbjct: 136 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 195
Query: 192 APERDVILWNTIVSGYIDVRNMIEAR-------KLFDQMPKKDVISWNTMLSGYANNGDV 244
+ D I ++++ Y +V ++ + + KL + VIS TM YA G V
Sbjct: 196 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRGLV 252
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E + F M + N+ WN +I GYANNG E + F+ M+T+ + + T+ + + A
Sbjct: 253 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK-NIRVDSITMRSAVLA 311
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
A++G+L+ ++W+ Y + Y+ + V LIDMYAKCG I A VF+ + KD++ W
Sbjct: 312 SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLW 371
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+ +I G +HG G A+ L++EMK AG P+ TFIG+L AC + GLV+EG F M
Sbjct: 372 SVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP- 430
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
D+ I P +HY C+VDLL RAG L +A DF+ MPI+ +W LL +C++++ V L E
Sbjct: 431 DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGE 490
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+A E+L L+P N ++V LSN+Y W VA +++ M G K G SSIE+N
Sbjct: 491 IAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN 547
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 303/537 (56%), Gaps = 16/537 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
KHL Q+ Q++ SGL K ++ + I AC + YA K F ++++ +++ WNA+ GY
Sbjct: 1 KHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
Q + ++ M+ PNCFTF VLK+C + G+++H K GF +N+
Sbjct: 61 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----EL 191
FV +L+ +Y+ I A VF ++ +R VV WTS+I+GY+ GD + A +F +
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 180
Query: 192 APERDVILWNTIVSGYIDVRNMIEAR-------KLFDQMPKKDVISWNTMLSGYANNGDV 244
+ D I ++++ Y +V ++ + + KL + VIS TM YA G V
Sbjct: 181 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTM---YAKRGLV 237
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E + F M + N+ WN +I GYANNG E + F+ M+T+ + + T+ + + A
Sbjct: 238 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK-NIRVDSITMRSAVLA 296
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
A++G+L+ ++W+ Y + Y+ + V LIDMYAKCG I A VF+ + KD++ W
Sbjct: 297 SAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLW 356
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+ +I G +HG G A+ L++EMK AG P+ TFIG+L AC + GLV+EG F M
Sbjct: 357 SVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP- 415
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
D+ I P +HY C+VDLL RAG L +A DF+ MPI+ +W LL +C++++ V L E
Sbjct: 416 DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGE 475
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+A E+L L+P N ++V LSN+Y W VA +++ M G K G SSIE+N
Sbjct: 476 IAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN 532
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 294/496 (59%), Gaps = 17/496 (3%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL-DAMP--NCFTFPIVLKS 109
AR++FD++ ++ VSWN++ GY +N F + K+L MP N ++ ++
Sbjct: 66 ARQVFDEMPHRDTVSWNSIITGYWKN-------GCFDESKRLFGLMPTKNVVSWNSMIAG 118
Query: 110 CVKINALREG-EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
C++ + E + + +N N A+I +E A ++F EM RNV+
Sbjct: 119 CIEDERIDEAWQYFQAMPQRNTASWN-----AMISGLVRYDRVEEASRLFEEMPRRNVIS 173
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
+T+M++GY G+I AR LF P+++V+ W ++SGY++ EA LF+QMP K++
Sbjct: 174 YTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
++ M++GY G ++ K LF+++P R++ SWN +I GYA NG E L +ML
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM 293
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G + P+ +T+++VL+AC+ L +L + HV +GY+ + + NALI MY KCG I +
Sbjct: 294 G-MQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILD 352
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
+ F +D D+++WN +I+ A HG AL+ F EM++ PDGITF+ +L AC H
Sbjct: 353 SELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGH 412
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G V E L++F SM Y IV + EH+ C+VD+L+R G++ +A ++ MP EAD IW
Sbjct: 413 AGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWG 472
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LL +C V+ NV+L ELA +++ ELEP+N +V+LSNIY G W +V R++ MR+ G
Sbjct: 473 ALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQG 532
Query: 529 FKKLPGCSSIEVNEVV 544
KK P S +E++ V
Sbjct: 533 VKKQPAYSWMEIDNKV 548
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 9/295 (3%)
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+ H L +K +++ I + I AA +VF EM R+ V W S+I GY G
Sbjct: 33 QFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNG 92
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
++ LF L P ++V+ WN++++G I+ + EA + F MP+++ SWN M+SG
Sbjct: 93 CFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVR 152
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
VEE RLFEEMP RNV S+ ++ GYA G + F M + N +
Sbjct: 153 YDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQK-----NVVSWTV 207
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
++S G D ++ +++ + N+ A+I Y K G + A +F+ + +D
Sbjct: 208 MISGYVENGKFDEAE--NLFEQMPD--KNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
L +WN +I+G A +G G AL L +M G PD T I +L AC+ + ++EG
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEG 318
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT + + A+ +FD+I +++ SWNAM GYAQN + L +QM K+ P+
Sbjct: 239 MITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 298
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C + +L+EG + H LVLK+G+ + I + ALI +Y +I + F
Sbjct: 299 HSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFR 358
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPER---DVILWNTIVSGYIDVRNMIE 215
++D +VV W +MI + G A F E+ R D I + +++S + E
Sbjct: 359 QIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHE 418
Query: 216 ARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
+ F+ M I + ++ + G VE+ ++ +EMP E + W L+
Sbjct: 419 SLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAA 477
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 142/351 (40%), Gaps = 62/351 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A++ ++ AR +F+ + +NVVSW M +GY +N LF Q MP+
Sbjct: 177 MVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQ------MPD 230
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
NI TA+I Y + A +F
Sbjct: 231 ---------------------------------KNIVAMTAMITGYCKEGKTDKAKILFD 257
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNM 213
++ R++ W +MI GY G A L + P+ ++ ++++ + ++
Sbjct: 258 QIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLI--SVLTACSSLASL 315
Query: 214 IEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
E RK + K S N +++ Y G + + + F ++ +V SWN +I +
Sbjct: 316 QEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAF 375
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYN 324
A +G + L +F M + RV P+ T +++LSAC G + F+ + Y
Sbjct: 376 ARHGFYDRALASFGEMRS-NRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVX 434
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
+ C L+D+ ++ G +E A + M D W +++ +H
Sbjct: 435 RPEHFAC----LVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVH 481
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
V+ SG E I +IT + + + F +I +VVSWNAM +A++ F+
Sbjct: 325 VLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRA 384
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVGTALIE 143
+ F +M+ P+ TF +L +C + E + ++ L++
Sbjct: 385 LASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVD 444
Query: 144 LYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGDIVSARCLFELAPE 194
+ S G +E AYK+ EM E + +W +++ + G++ +A+ + EL P+
Sbjct: 445 ILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGEL-AAKKIVELEPQ 500
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 262/421 (62%), Gaps = 9/421 (2%)
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV----VWTSMINGYISCGDIVSARC 187
+ FV + ++ + G + A +F + + +V +S++ ++ D+ + R
Sbjct: 90 KPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRI 149
Query: 188 LF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
L ++ ++ L N IV Y M EAR LF++MP++DV++WN M++ GD
Sbjct: 150 LHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGD 209
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
E LF MPERNV SW +I GY G E + F +M E V N+ T+V VL+
Sbjct: 210 HEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKM-EEAGVKCNEVTVVAVLA 268
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA LGALD +H Y+ +G++ NV + N LIDMY KCG +E A VF M+ + +++
Sbjct: 269 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 328
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W+ +I GLAMHGR AL LF +M G P+G+TFIG+L AC+HMGL+ EG +F SM
Sbjct: 329 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 388
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
DY I+PQIEHYGCMVDLL+RAG L EA +F+ MP++ + V+W LLG+CRV+KNVE+A
Sbjct: 389 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E A++ L EL+P N +V+LSNIY + GRW+D AR++ M+D KK PG SSI V+ V
Sbjct: 449 EEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGV 508
Query: 544 V 544
V
Sbjct: 509 V 509
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 52/404 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN--VVSWNAMFNGY 75
L Q+ Q++ + S R+ CA YA+++F + Q WN+
Sbjct: 44 LRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKAL 103
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
A+ + ++LF ++++ D P+ FT VL++C+ + L G LH +V K GFR+N+
Sbjct: 104 AEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNL 163
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
++ ++ LY++ + A +F +M +R+VV W MI I GD A LF PER
Sbjct: 164 YLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPER 223
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP------------------------------- 224
+V W ++++GY+ EA LF +M
Sbjct: 224 NVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIH 283
Query: 225 --------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
K++V NT++ Y G +EE ++FEEM ER V SW+ +IGG A +G
Sbjct: 284 EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAE 343
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVC 331
E L F M G + PN T + +L AC+ +G + F+ Y + C
Sbjct: 344 EALRLFSDMSQVG-IEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC 402
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
++D+ ++ G++ A + +M K + + W ++ +H
Sbjct: 403 ----MVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVH 442
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 301/530 (56%), Gaps = 11/530 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV----VSWNAMFNGY 75
QI Q+VTSGL D++T +++ A + Y D + N +N++ NGY
Sbjct: 23 QIHAQLVTSGLVYDDFVTSKVMEFFANFVE--YGDYACDYLEQGNTRLGSFPFNSLINGY 80
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
EF + V ++ +M + +P+ FTFP++LK+C + REG ++H +V+K G A+
Sbjct: 81 VGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADH 140
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-RCLFELAPE 194
+V +LI Y A KVF EM R+VV W S+I+G++ G A F + E
Sbjct: 141 YVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRMDVE 200
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK---DVISWNTMLSGYANNGDVEECKRLF 251
+ ++++ ++ + + + ++ +++ N ML Y NG E K +F
Sbjct: 201 PSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIF 260
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+E+P R++ SW +I G + + L+ F M T G + P+ + +VLSACA LG L
Sbjct: 261 DELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLG-ISPDAIILTSVLSACASLGTL 319
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
DF WVH Y G + ++ +G A++DMYAKCG IE A+ +F SM ++ TWN ++ GL
Sbjct: 320 DFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGL 379
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG AL+LF M +G P+ ITF+ IL AC H GLV+EG YF +M+ Y+++P+
Sbjct: 380 AMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPK 439
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGCM+DL RAG L EAV+ + MP++ D +IW LL +C N+EL+ + +
Sbjct: 440 LEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQDYIL 499
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+ + FV+LSNI RW +V R++ M+D G +K PG S IEV+
Sbjct: 500 ELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVD 549
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/575 (36%), Positives = 318/575 (55%), Gaps = 13/575 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q + G + + ++ + + + ++FD++ +NVVSW ++ GY QN
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF+QM+ PN FTF VL A+ +G ++H +V+K+G + IFVG
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+++ +YS + A VF M+ RN V W SMI G+++ G + A LF V L
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 200 WNTIVSGYI----DVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
TI + I +++ M A++L Q+ K D+ ++ Y+ ++++ +LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 252 EEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR-LG 309
M +NV SW +I GY NG ++ F +M E V PN+ T +VL+ACA
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+++ K H + +G+ +CV +AL+ MYAK G IE+A +VF +DL++WN++IS
Sbjct: 413 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMIS 472
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A HG G +L +F EM++ DGITFIG++ ACTH GLV EG YF M DY IV
Sbjct: 473 GYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIV 532
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +EHY CMVDL +RAG L +A+D + +MP A A IW LL +CRV+ NV+L ELA E+
Sbjct: 533 PTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEK 592
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV---ML 546
L L+P++ A +V+LSNIY G W++ A+++ M KK G S IEV M
Sbjct: 593 LISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMA 652
Query: 547 GCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVV 581
G LS + ++ E I+L +P T V+
Sbjct: 653 GDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVL 687
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 222/457 (48%), Gaps = 17/457 (3%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+++++FD+ Q + N + +++N+ ++ + LF +++ + + + VLK C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ G+++HC +K GF ++ VGT+L+++Y +++E +VF EM +NVV WTS
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 172 MINGYISCGDIVSARCLF---ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD- 227
++ GY G A LF +L + V G + +E M K
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 228 ----VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
+ N+M++ Y+ + V + K +F+ M RN SWN +I G+ NGL E + F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
RM EG V TV+ CA + + F+K +H NG ++ + AL+ Y+KC
Sbjct: 284 RMRLEG-VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 344 GIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLFHEMKN-AGEMPDGITFIG 401
I++A +F M +++++W IISG +GR A++LF +M+ G P+ TF
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSS 402
Query: 402 ILCACTH-MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC VE+G F S ++ + +V + A+ G + A + KR +
Sbjct: 403 VLNACAAPTASVEQG-KQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-V 460
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+ D V W +++ Y + +L+ E+ KN
Sbjct: 461 DRDLVSWNSMISG---YAQHGCGKKSLKIFEEMRSKN 494
>gi|215741011|dbj|BAG97506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 190/452 (42%), Positives = 277/452 (61%), Gaps = 3/452 (0%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M++ P+ +TFP VLK+C R G +H ++ G A++F ALI Y
Sbjct: 1 MRRAAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGD 60
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ KVF + R++V W SM+ GY+ CG++ A+ LF+ +RD W T++ GY ++
Sbjct: 61 CRSGRKVF-DHGVRDLVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEM 119
Query: 211 RNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
++ AR+LFDQMP +D++ WN+M+ GYA +G ++E + LFEEMPERNV SW+ +I GY
Sbjct: 120 AGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGY 179
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
G E L+ F+RML G + P+ V ++ACA+LGAL+ +W+H Y E +
Sbjct: 180 VRFGEPNEALEFFQRMLRCG-IKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFD 238
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V ALIDMY KCG ++ A +F SM K ++TWN +I GL HG G A+ LF++M+
Sbjct: 239 VVVQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMET 298
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
D ++ + +L +CTH GLV EGL F M D + P++EHYG ++DLL RAGR+
Sbjct: 299 ERAPMDDLSILAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVD 358
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
+A + ++ MP+E +W +LL SCR ++ VELAEL++ERL L + +V+LSNIY
Sbjct: 359 QARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYA 418
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
D G W DV RI+ M G KK G S IEV+
Sbjct: 419 DEGMWDDVFRIRKLMSAEGMKKNIGRSVIEVD 450
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD++ D+++V WN+M +GYA++ VLF +M + N ++ IV+ V+
Sbjct: 126 ARELFDQMPDRDLVCWNSMIDGYARHGRMDEARVLFEEMPE----RNVISWSIVIDGYVR 181
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER----NVVV 168
E E +L+ G + + + + A+E + ++++ +VVV
Sbjct: 182 FGEPNEALEFFQRMLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVV 241
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-- 226
T++I+ Y+ CG + A+ +FE P++ V+ WN ++ G ++A KLF+QM +
Sbjct: 242 QTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERA 301
Query: 227 --DVISWNTMLSGYANNGDVEECKRLFEEM 254
D +S +L+ + G V E +F M
Sbjct: 302 PMDDLSILAVLTSCTHAGLVSEGLGIFYRM 331
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 9/225 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A+ +M AR +F+++ ++NV+SW+ + +GY + + F +M + P+
Sbjct: 144 MIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLRCGIKPD 203
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ +C ++ AL +G LH + K ++ V TALI++Y ++ A +F
Sbjct: 204 RVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGRLDLAKLIFE 263
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-----ELAPERDV----ILWNTIVSGYIDV 210
M +++VV W MI G + G + A LF E AP D+ +L + +G +
Sbjct: 264 SMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTSCTHAGLVSE 323
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
I R D + V + ++ G V++ + E MP
Sbjct: 324 GLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMP 368
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 322/582 (55%), Gaps = 67/582 (11%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWNAMFNGYAQNEFH 81
+ +G E + +I ++ ++ + A +FD+IT + +V+SWN++ + + ++
Sbjct: 188 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 247
Query: 82 RTVVVLFTQM------KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
T + LF++M K + + + +L +C + A+ + +E+H ++NG ++
Sbjct: 248 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV 307
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG ALI+ Y+ +E A KVF M+ ++VV W +M+ GY G+ +A LF+ +
Sbjct: 308 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 367
Query: 196 ----DVILWNTIVSGYIDVRNMIEARKLFDQM---------------------------- 223
DV+ W +++GY EA LF QM
Sbjct: 368 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 427
Query: 224 ---------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP--ERNVF 260
+D++ +N ++ Y+ + + +F+++P ERNV
Sbjct: 428 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 487
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWVHV 319
+W +IGG+A G + L F M++E V PN TI +L ACA L A+ K +H
Sbjct: 488 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 547
Query: 320 YA-EYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
Y ++ Y+ + V N LIDMY+KCG ++ A VF+SM K I+W ++++G MHGRG
Sbjct: 548 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 607
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ AL +F +M+ AG +PD ITF+ +L AC+H G+V++GLSYF SM+ DY + P+ EHY C
Sbjct: 608 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 667
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+DLLAR+GRL +A VK MP+E AV+W LL +CRV+ NVELAE AL +L E+ +N
Sbjct: 668 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 727
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++ ++SNIY GRWKDVARI+ M+ +G KK PGCS ++
Sbjct: 728 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 769
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/550 (25%), Positives = 253/550 (46%), Gaps = 91/550 (16%)
Query: 10 EQLETTKHLHQIQTQVVTSG---------------LEKSDYITPR-----IITACAQLKQ 49
++ ++ +HQI Q++ SG L +I+PR ++ +
Sbjct: 52 KECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACGA 111
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
YA + +++T V WN + + + + + + +M + P+ FT P VLK+
Sbjct: 112 TDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKA 171
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER---NV 166
C ++ + R G H L+ NGF +N+F+ AL+ +YS ++E A +F E+ +R +V
Sbjct: 172 CGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDV 231
Query: 167 VVWTSMINGYISCGDIVSARCLF-------------------------------ELAPER 195
+ W S+++ ++ + +A LF + P+
Sbjct: 232 ISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQT 291
Query: 196 --------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
DV + N ++ Y M A K+F+ M KDV+SWN M++GY+ +
Sbjct: 292 KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQS 351
Query: 242 GDVEECKRLFEEMPERN----VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
G+ E LF+ M + N V +W +I GY+ G E L+ F++M+ G + PN T
Sbjct: 352 GNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSL-PNCVT 410
Query: 298 IVTVLSACARLGALDFSKWVHVYA----------EYNGYQGNVCVGNALIDMYAKCGIIE 347
I++VLSACA LGA +H Y+ ++ G ++ V NALIDMY+KC +
Sbjct: 411 IISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFK 470
Query: 348 NAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAGEMPDGITFIGIL 403
A +F+ ++ ++++TW +I G A +G AL LF EM + G P+ T IL
Sbjct: 471 AARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCIL 530
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIE 461
AC H+ + G + + + ++ C++D+ ++ G + A M +
Sbjct: 531 MACAHLAAIRIG-KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-Q 588
Query: 462 ADAVIWANLL 471
A+ W +++
Sbjct: 589 KSAISWTSMM 598
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 190/536 (35%), Positives = 294/536 (54%), Gaps = 65/536 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK--QMTYARKMFDKITDQNVVS 67
E+ L QI Q++ G + R++T A ++ +TYAR +FD+I+ N V
Sbjct: 19 ERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVM 78
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M Y+ + ++L+ QM N +TFP +LK+C ++AL E ++H ++
Sbjct: 79 WNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQII 138
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF + E+Y+T S++ Y G I SA
Sbjct: 139 KRGFGS---------EVYAT----------------------NSLLRVYAISGSIKSAHV 167
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+L +P +D++SWNTM+ GY G+VE
Sbjct: 168 LFDL-------------------------------LPSRDIVSWNTMIDGYIKCGNVEMA 196
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++F+ MPE+NV SW +I G+ G+ E L ++ML G + P+ T+ LSACA
Sbjct: 197 YKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAG-IKPDKITLSCSLSACAG 255
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGAL+ KW+H Y N + + +G ALIDMY KCG ++ A+ VF+ ++ K + TW I
Sbjct: 256 LGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAI 315
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I G A+HG+G+ AL F +M+ AG P TF +L AC+H GLVEEG S F+SM+ Y+
Sbjct: 316 IGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYN 375
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P +EHYGCMVDLL RAG L EA +FV+ MPI+ +A IW +LL +C ++K++EL +
Sbjct: 376 MKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIG 435
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ L EL+P++ ++ L++I+ G W + ++++ +++ G LPGCS+I +N V
Sbjct: 436 KFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGV 491
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 296/548 (54%), Gaps = 49/548 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIIT--ACAQLKQMTYARKMFDKITDQNVVS 67
+QL + K + Q Q + SGL ++ +II+ + + L + YA+ +F+ N
Sbjct: 120 QQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAMDNPFV 179
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE------- 120
N M YA++ F + L+ M + D + FT+P LK+C ++ EG+
Sbjct: 180 CNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARVLWCNEGDIKCTQLD 239
Query: 121 ------ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
E+HC + + G + F+ +L+ LYS
Sbjct: 240 IACKGAEIHCRLFRLGLDQDCFIQNSLVYLYS---------------------------- 271
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
CG + ARC+F+ E+ + WN ++S Y + + A L MP K+V+SWN +
Sbjct: 272 ---QCGFLDLARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNML 328
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++ Y G +E+ K +F+EMPER+ SWN +I GY + L F+ M V
Sbjct: 329 IARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEI-ANVEAT 387
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
D T+++VL ACA GAL+ + +H+ + Y+ + NAL+DMYAKCG + A +VF+
Sbjct: 388 DITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFS 447
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFH--EMKNAGEMPDGITFIGILCACTHMGLV 412
+ K + WN +I LA+HG AL LF EM G P+ +TFIG+L AC+H GLV
Sbjct: 448 ELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLV 507
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EG ++F M +Y I+P I+HYGCMVDLL+R G L EA +K MP EA++V+W LLG
Sbjct: 508 DEGRTFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLG 567
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CRV+ +V+LAE + ++L ++EP ++V+LSNIY + RW DV R++ M +G K
Sbjct: 568 ACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKK 627
Query: 533 PGCSSIEV 540
PG S I +
Sbjct: 628 PGSSHIGI 635
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 296/527 (56%), Gaps = 40/527 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ +V GL + Y ++++ + Q++ ARK+FDKI + N+ W + A+ F
Sbjct: 49 LHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF 108
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + F++M+K PN F P +LK+C ++ R GE +H ++LKN F ++ ++ +A
Sbjct: 109 YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 168
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI +YS CG + A +F+ ++D+++
Sbjct: 169 LIYMYS-------------------------------KCGHVEKACRVFDWIVDKDLVVM 197
Query: 201 NTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEEMP- 255
N +VSGY + EA L +M K +V+SWNT+++G++ GD +F M
Sbjct: 198 NAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTA 257
Query: 256 ---ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
E +V SW +I G+ N E DAFK ML +G P+ TI ++L AC + L
Sbjct: 258 NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQG-FCPSSVTISSLLPACTNVANLR 316
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H YA G + +V V +AL+DMYAKCG I A +F M ++ +TWN++I G A
Sbjct: 317 HGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYA 376
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG A+ LF++M+ + D +TF +L AC+H G+VE G S F+ M Y I P++
Sbjct: 377 NHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRL 436
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHY CMVDLL RAG+L+EA D +K MP+E D +W LLG+CR + N+ELAE+A E L E
Sbjct: 437 EHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFE 496
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
LEP++P + ++LSN+Y D GRW + A++K M+ F K PGCS IE
Sbjct: 497 LEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 543
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+H +I + G+EK Y+ ++ A+ ++ A+ +F + ++N V+WN++ GY
Sbjct: 316 RHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGY 375
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRAN 134
A + + + LF QM++ D + TF VL +C + GE L + K
Sbjct: 376 ANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPR 435
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLF 189
+ +++L + AY + M E + VW +++ + G+I V+A LF
Sbjct: 436 LEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLF 495
Query: 190 ELAPE 194
EL PE
Sbjct: 496 ELEPE 500
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 284 RMLTEGRVFPNDA-TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
R ++ R F + + T + AR AL + +H + G L+ Y +
Sbjct: 15 RNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTE 74
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG + NA +F+ + ++ W + A G ALS F EM+ G P+ I
Sbjct: 75 CGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 134
Query: 403 LCACTHM 409
L AC H+
Sbjct: 135 LKACGHL 141
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 294/528 (55%), Gaps = 42/528 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +F +I + WN M G++ ++ + ++ M + + N T+ + K+C +
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ + G +H VLK GF ++++V ALI +Y + + A KVF EM ER++V W S+
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149
Query: 173 INGYISC-------------------GDIVS----------------ARCLFELAPER-- 195
+ GY C GD V+ A + + E
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNV 209
Query: 196 --DVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
DV L NT++ Y R ++ AR +FDQM ++++SWN M+ GY G++ + LF+
Sbjct: 210 EIDVYLGNTLIDMY-GRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFD 268
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M +R+V SW +I Y+ G F E L FK M+ E +V P++ T+ +VLSACA G+LD
Sbjct: 269 AMSQRDVISWTNMITSYSQAGQFTEALRLFKEMM-ESKVKPDEITVASVLSACAHTGSLD 327
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ H Y + + ++ VGNALIDMY KCG++E A++VF M KD ++W +IISGLA
Sbjct: 328 VGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLA 387
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
++G AL F M P F+GIL AC H GLV++GL YF+SM Y + P++
Sbjct: 388 VNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEM 447
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HYGC+VDLL+R+G L A +F+K MP+ D VIW LL + +V+ N+ LAE+A ++L E
Sbjct: 448 KHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLE 507
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L+P N N+V+ SN Y RW+D +++ M + +K G S IE+
Sbjct: 508 LDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEM 555
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 180/400 (45%), Gaps = 50/400 (12%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I +V+ G E Y++ +I + A+K+FD++ ++++VSWN++ GY Q +
Sbjct: 99 IHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKR 158
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
R V+ +F M+ + T V+ +C + + + + +N ++++G
Sbjct: 159 FREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNT 218
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI++Y + A VF +M RN+V W +MI GY G++V+AR LF+ +RDVI W
Sbjct: 219 LIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISW 278
Query: 201 NTIVSGYIDVRNMIEARKLFDQM------------------------------------- 223
+++ Y EA +LF +M
Sbjct: 279 TNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQK 338
Query: 224 --PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
K D+ N ++ Y G VE+ +F+EM +++ SW +I G A NG LD
Sbjct: 339 YDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDY 398
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNAL 336
F RML E V P+ V +L ACA G +D F VY + CV
Sbjct: 399 FSRMLRE-VVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCV---- 453
Query: 337 IDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
+D+ ++ G ++ A + M T D++ W ++S +HG
Sbjct: 454 VDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHG 493
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 53/381 (13%)
Query: 141 LIELYS-TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
LI+ Y+ + I A+ +F ++ + W MI G+ A ++ L R +L
Sbjct: 16 LIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLM-YRQGLL 74
Query: 200 WNTIVSGYI--------DVR--NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
N + ++ DV + I AR L +S N +++ Y + G + ++
Sbjct: 75 GNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVS-NALINMYGSCGHLGLAQK 133
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+EMPER++ SWN L+ GY F EVL F+ M G V + T+V V+ AC LG
Sbjct: 134 VFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAG-VKGDAVTMVKVVLACTSLG 192
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ + Y E N + +V +GN LIDMY + G++ A VF+ M ++L++WN +I
Sbjct: 193 EWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIM 252
Query: 370 G-------------------------------LAMHGRGAGALSLFHEMKNAGEMPDGIT 398
G + G+ AL LF EM + PD IT
Sbjct: 253 GYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEIT 312
Query: 399 FIGILCACTHMGLVEEGLS---YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
+L AC H G ++ G + Y Q Y + I ++D+ + G + +A++
Sbjct: 313 VASVLSACAHTGSLDVGEAAHDYIQK----YDVKADIYVGNALIDMYCKCGVVEKALEVF 368
Query: 456 KRMPIEADAVIWANLLGSCRV 476
K M + D+V W +++ V
Sbjct: 369 KEMR-KKDSVSWTSIISGLAV 388
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 32/212 (15%)
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
++N I S + +++A LF Q+ + + WN M+ G++ + E R++ N
Sbjct: 13 IYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMY------N 66
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
+ GL+G N+ T + + ACAR+ + +H
Sbjct: 67 LMYRQGLLG--------------------------NNLTYLFLFKACARVPDVSCGSTIH 100
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
G++ ++ V NALI+MY CG + A VF+ M +DL++WN+++ G R
Sbjct: 101 ARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFR 160
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
L +F M+ AG D +T + ++ ACT +G
Sbjct: 161 EVLGVFEAMRVAGVKGDAVTMVKVVLACTSLG 192
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 322/557 (57%), Gaps = 26/557 (4%)
Query: 5 TGAHSEQ-----LETTKH---LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKM 56
+G HS+ +++ H L QI +++ GL+ S ++ ++I A + +T+AR++
Sbjct: 16 SGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
FD + + WNA+ GY++N + +++++ M+ P+ FTFP +LK+C ++ L
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMIN 174
+ G +H V + GF A++FV LI LY+ + + +A VF + ER +V WT++++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 175 GYISCGDIVSARCLFELAPERDVIL-WNTIVS---GYIDVRNMIEARKLFDQMPKKDV-- 228
Y G+ + A +F + DV W +VS + ++++ + R + + K +
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 229 -----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
IS NTM YA G V K LF++M N+ WN +I GYA NG E +D F
Sbjct: 256 EPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
M+ + V P+ +I + +SACA++G+L+ ++ ++ Y + Y+ +V + +ALIDM+AKC
Sbjct: 313 EMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G +E A VF+ +D++ W+ +I G +HGR A+SL+ M+ G P+ +TF+G+L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC H G+V EG +F MA D+ I PQ +HY C++DLL RAG L +A + +K MP++
Sbjct: 432 MACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
+W LL +C+ +++VEL E A ++L ++P N ++V LSN+Y W VA ++V
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 524 MRDTGFKKLPGCSSIEV 540
M++ G K GCS +EV
Sbjct: 551 MKEKGLNKDVGCSWVEV 567
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 300/533 (56%), Gaps = 34/533 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T LH + ++ + + ++ + I+A L + Y F ++ + NV +NAM
Sbjct: 148 TINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIK 207
Query: 74 GYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G+ + + + M ++ + +P +TF ++K+C + A+ G+ +HC + K GF
Sbjct: 208 GFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 267
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++FV TAL++ YS + + A KV F+
Sbjct: 268 SHLFVQTALVDFYSKLEILSEARKV-------------------------------FDEM 296
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
ERD W +VS V +M ARKLF++MP+++ +WNTM+ GYA G+VE + LF
Sbjct: 297 CERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFN 356
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+MP +++ SW +I Y+ N + + L + M G + P++ T+ TV SACA +GAL+
Sbjct: 357 QMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNG-IIPDEVTMSTVASACAHIGALE 415
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H Y G +V +G+AL+DMYAKCG ++ ++ +F + K+L WN +I GLA
Sbjct: 416 LGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLA 475
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG AL +F M+ MP+G+TFI IL ACTH GLV+EG S F SM DY I P I
Sbjct: 476 VHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDI 535
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
HYGCMVD+L+++G L EA++ +K M E +++IW LL C+++ N E+AE A+E+L
Sbjct: 536 RHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMI 595
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF-KKLPGCSSIEVNEVV 544
LEP N ++ +L ++Y + W +VA I+ M++ G KK PG S IE+ +
Sbjct: 596 LEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTI 648
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH LE K +H V++ GL YI ++ A+ + + +F K+TD+N+
Sbjct: 409 AHIGALELGKEIHHY---VMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLY 465
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WNA+ G A + + + +F M++ MPN TF +L +C + EG +
Sbjct: 466 CWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSM 525
Query: 127 LKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVS 184
++ R +I ++++ S + A ++ M+ E N ++W +++NG G+
Sbjct: 526 TRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEI 585
Query: 185 ARCLFELAPERDVIL-------WNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
A E A E+ +IL +N +VS Y + ++ +E + M +K V
Sbjct: 586 A----EDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGV 632
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 306/558 (54%), Gaps = 47/558 (8%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
LE++ + II A + + A +F+K+ + SWN+M +G+ Q+ +V F
Sbjct: 81 LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFA 140
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
QM + N ++F L +C + L+ G ++H LV ++ + +++++G+AL+++YS
Sbjct: 141 QMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCG 200
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGY----------------ISCG---------DIVS 184
+E A VF EM R+ V W S+I Y I CG +VS
Sbjct: 201 RVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVS 260
Query: 185 ARCLFELAPE---------------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
A E D+IL N ++ Y + EAR +FD MP + V+
Sbjct: 261 ACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVV 320
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
S +M+SGYA V+ + +F M ++V +WN LI G NG E L F R+L
Sbjct: 321 SETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF-RLLKRE 379
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ------GNVCVGNALIDMYAKC 343
V+P T +L+ACA L L + H + +G++ +V VGN+LIDMY KC
Sbjct: 380 SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKC 439
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G +EN VF M KD ++WN +I G A +G G AL +F +M +GE PD +T IG+L
Sbjct: 440 GSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVL 499
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
CAC+H GL++EG YF+SM + ++P +HY CMVDLL RAG L EA + ++ M ++ D
Sbjct: 500 CACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPD 559
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
A++W +LL +C+V++N++L E +++L E++P+N +V+LSN+Y + WK+V R++
Sbjct: 560 AIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKL 619
Query: 524 MRDTGFKKLPGCSSIEVN 541
MR G K PGCS IE+
Sbjct: 620 MRQRGVVKQPGCSWIEIQ 637
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 193/413 (46%), Gaps = 53/413 (12%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K QI + V S Y+ ++ ++ ++ YA+ +FD++T ++ VSWN++
Sbjct: 164 LQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSL 223
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NG 130
Y QN + +F +M K P+ T V+ +C I+A++EG+++H V+K +
Sbjct: 224 ITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDE 283
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
FR ++ +G AL+++Y+ I A +F M R+VV TSM++GY + AR +F
Sbjct: 284 FRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFS 343
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK------------------------ 226
+DVI WN +++G EA LF + ++
Sbjct: 344 NMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQL 403
Query: 227 ---------------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
DV N+++ Y G VE R+F+ M E++ SWN +
Sbjct: 404 GRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAM 463
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GYA NG + L+ F +ML G P+ T++ VL AC+ G LD ++ +
Sbjct: 464 IVGYAQNGFGNKALEVFCKMLESGEA-PDHVTMIGVLCACSHAGLLDEGRY--YFRSMTA 520
Query: 326 YQGNVCVGN---ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
G + + + ++D+ + G +E A ++ M + D I W ++++ +H
Sbjct: 521 QHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 188/450 (41%), Gaps = 82/450 (18%)
Query: 94 LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
LD+ P F +L C + + R+ +H ++K+ F + F+ LI++Y ++
Sbjct: 17 LDSSP----FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDV 72
Query: 154 AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
A K+F M ERN+ W S+I + G + A +FE P+ D WN+++SG+
Sbjct: 73 ARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRF 132
Query: 214 IEARKLFDQMPK---------------------------------------KDVISWNTM 234
EA F QM DV + +
Sbjct: 133 DEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSAL 192
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ Y+ G VE + +F+EM R+ SWN LI Y NG E L F M+ G V P+
Sbjct: 193 VDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCG-VEPD 251
Query: 295 DATIVTVLSACARLGALDFSKWVHV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ T+ +V+SACA + A+ + +H + + ++ ++ +GNAL+DMYAKC I A +F
Sbjct: 252 EVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIF 311
Query: 354 N-------------------------------SMDTKDLITWNTIISGLAMHGRGAGALS 382
+ +M KD+ITWN +I+G +G AL
Sbjct: 312 DMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALI 371
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF-----QSMAMDYSIVPQIEHYGC 437
LF +K P TF +L AC ++ ++ G Y +
Sbjct: 372 LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNS 431
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
++D+ + G + + M +E D V W
Sbjct: 432 LIDMYMKCGSVENGCRVFQHM-LEKDCVSW 460
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII---- 346
+F + + +L+ CAR + + VH + + + N LID+Y KCG +
Sbjct: 15 LFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 74
Query: 347 ---------------------------ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
++AV +F M D +WN++ISG HGR
Sbjct: 75 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL F +M G + + +F L AC + ++ G S S+ + + + +V
Sbjct: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLG-SQIHSLVYRSNYLSDVYMGSALV 193
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
D+ ++ GR+ A M + + V W +L+
Sbjct: 194 DMYSKCGRVEYAQSVFDEMTVRS-RVSWNSLI 224
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/585 (33%), Positives = 316/585 (54%), Gaps = 45/585 (7%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFD 58
+K T + + ++ L QIQ + GL++ I +++ + + L YA ++F+
Sbjct: 7 LKGTYISLLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFN 66
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE 118
I ++ +N M + + R+ + LF Q+++ P+ +T+P VLK I +RE
Sbjct: 67 HIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVRE 126
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
GE++H V+K G + +V +L+++Y+ +E +VF EM ER+ V W MI+GY+
Sbjct: 127 GEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVR 186
Query: 179 CGDIVSARCLFE-------------------------------------LAPERDV--IL 199
C A ++ +A E D+ I+
Sbjct: 187 CKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPIM 246
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
N ++ Y + AR++FD M K+V W +M++GY G +++ + LFE P R+V
Sbjct: 247 GNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDV 306
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
W +I GY F + + F M G V P+ +VT+L+ CA+LGAL+ KW+H
Sbjct: 307 VLWTAMINGYVQFNHFEDAIALFGEMQIRG-VEPDKFIVVTLLTGCAQLGALEQGKWIHN 365
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
Y + N + + V ALI+MYAKCG IE ++++FN + D +W +II GLAM+G+ +
Sbjct: 366 YIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSE 425
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL LF M+ G PD ITF+ +L AC H GLVEEG F SM+ Y I P +EHYGC +
Sbjct: 426 ALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFI 485
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVI---WANLLGSCRVYKNVELAELALERLTELEPK 496
DLL RAG L EA + VK++P + + +I + LL +CR Y N+++ E L +++
Sbjct: 486 DLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSS 545
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ + +L++IY RW+DV +++ M+D G KK+PG S+IEV+
Sbjct: 546 DSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEVD 590
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 235/531 (44%), Gaps = 63/531 (11%)
Query: 102 TFPIVLKSCVKINALREGE-ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
T+ +LKSC ++ L++ + + C L+ +I + S+ A ++F
Sbjct: 10 TYISLLKSCKSMSQLKQIQAHIFCFGLQQD--RDILNKLMAFSMDSSLGDFNYANRIFNH 67
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEA 216
+ ++ ++ MI ++ G + SA LF+ ER D + ++ G + + E
Sbjct: 68 IHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREG 127
Query: 217 RKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
K+ + K D N+++ YA G VE ++FEEMPER+ SWN +I GY
Sbjct: 128 EKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRC 187
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
F E +D ++RM E PN+AT+V+ LSACA L L+ K +H Y N +
Sbjct: 188 KRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIA-NELDLTPIM 246
Query: 333 GNALIDMYAKCGIIENAVDVFNSM-------------------------------DTKDL 361
GNAL+DMY KCG + A ++F++M ++D+
Sbjct: 247 GNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDV 306
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ W +I+G A++LF EM+ G PD + +L C +G +E+G + +
Sbjct: 307 VLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG-KWIHN 365
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
+ I ++++ A+ G + ++++ + + D W +++ C + N +
Sbjct: 366 YIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLK-DMDTTSWTSII--CGLAMNGK 422
Query: 482 LAELALERLTELE----PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
+E ALE ++ + FV + + G G ++ ++ F +
Sbjct: 423 TSE-ALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKL--------FHSMSSIYH 473
Query: 538 IEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVVIFSTFAS 588
IE N + GC L R +++ ++K LP N+ + IV ++ S
Sbjct: 474 IEPN-LEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEI--IVPLYGALLS 521
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 286/507 (56%), Gaps = 44/507 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL-DAM 97
+IT + ++ AR +F+ + + N V NAM GYA+N F + ++L DAM
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNR-------QFDEARRLFDAM 53
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P K V N++ G Y+ + +
Sbjct: 54 PA--------KDLVSWNSMLTG-------------------------YTRNGEMRLGLQF 80
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F EM ER+VV W M++G++ GD+ S+ FE P + + W T++ G+ + EAR
Sbjct: 81 FEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEAR 140
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+LFDQMP ++V++WN M++ Y N V+E LF EMPE+N SW +I GY G E
Sbjct: 141 RLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDE 200
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
+M + P+ +T LS+CA L AL K +H +GY ++ V NALI
Sbjct: 201 ARQLLNQMPYRNK--PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALI 258
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
MYAKCG I +A +F +D D+++WN++I+ A++G G AL LFH+M+ G PD +
Sbjct: 259 TMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEV 318
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
TF+GIL AC+H+GL+++GL F+ M Y+I P EHY CMVDLL RAGRL EA V+
Sbjct: 319 TFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRG 378
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
M I A+A IW LLG+CR++ N+ELA+ A E+L E EP +N+V+LSN+ + GRW +V
Sbjct: 379 MKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEV 438
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV 544
AR++ M++ G +K PG S IE+ V
Sbjct: 439 ARVRRLMKEKGAEKQPGWSWIELQNRV 465
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 17/228 (7%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
++ AH L+ K LHQ+ V+ SG +++ +IT A+ ++ A +F I
Sbjct: 224 SSCAHLAALQVGKQLHQL---VMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHF 280
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL- 122
+VVSWN++ YA N R + LF +M+ P+ TF +L +C + + +G +L
Sbjct: 281 DVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLF 340
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
C+V +++L +E A+++ M N +W +++ G+
Sbjct: 341 KCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGN 400
Query: 182 I----VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ +A L E P + S Y+ + NM +D++ +
Sbjct: 401 LELAKFAAEKLLEFEPHK--------TSNYVLLSNMQAEAGRWDEVAR 440
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 292/532 (54%), Gaps = 66/532 (12%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A ++F + + + SWN+M +G+AQ++ + F +M + D + N ++F L +C
Sbjct: 100 AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAG 159
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ L G ++H LV K+ + ++++G+ALI++YS ++ A +VF M ERN+V W S+
Sbjct: 160 LMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSL 219
Query: 173 INGYISCGDIVSARCLF------ELAPER------------------------------- 195
I Y G A +F L P+
Sbjct: 220 ITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNK 279
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
D++L N +V Y + EAR++FD+M ++V+S +M+SGYA V+ + +F
Sbjct: 280 FRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFS 339
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+M +RNV SWN LI GY NG E L F R+L ++P T +L
Sbjct: 340 KMTQRNVVSWNALIAGYTQNGENEEALRLF-RLLKRESIWPTHYTFGNLL---------- 388
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ ++ VGN+LIDMY KCG IE+ VF M +D ++WN II G A
Sbjct: 389 --------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYA 434
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+G GA AL +F +M GE PD +T IG+LCAC+H GLVEEG YF SM ++ ++P
Sbjct: 435 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLK 493
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY CMVDLL RAG L EA + ++ MP+ DAV+W +LL +C+V+ N+E+ + A E+L E
Sbjct: 494 DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE 553
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++P N +V+LSN+Y +LGRW DV R++ MR G K PGCS IEV V
Sbjct: 554 IDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRV 605
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 186/373 (49%), Gaps = 18/373 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V S Y+ +I ++ + A ++F + ++N+V+WN++ Y QN
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVG 138
+ +F +M P+ T V+ +C + AL+EG ++H V+K N FR ++ +G
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ + A +VF M RNVV TSM++GY + +AR +F +R+V+
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVV 347
Query: 199 LWNTIVSGYIDVRNMIEARKL---------------FDQMPKKDVISWNTMLSGYANNGD 243
WN +++GY EA +L F + K D+ N+++ Y G
Sbjct: 348 SWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGS 407
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E+ R+FE+M ER+ SWN +I GYA NG E L F++ML G P+ T++ VL
Sbjct: 408 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK-PDHVTMIGVLC 466
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLI 362
AC+ G ++ + E +G ++D+ + G + A ++ +M D +
Sbjct: 467 ACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 526
Query: 363 TWNTIISGLAMHG 375
W ++++ +HG
Sbjct: 527 VWGSLLAACKVHG 539
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 147/265 (55%), Gaps = 1/265 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
++ + N ++ Y + +ARKLFD+MP+++ +WN+++S +G ++E RLF MP
Sbjct: 49 EIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP 108
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
E + SWN ++ G+A + F E L+ F +M E + N+ + + LSACA L L+
Sbjct: 109 EPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLL-NEYSFGSALSACAGLMDLNMGT 167
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
VH + Y +V +G+ALIDMY+KCG + A +VF+ M ++L+TWN++I+ +G
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
+ AL +F M ++G PD +T ++ AC + ++EGL + +
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPI 460
+VD+ A+ ++ EA RM I
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRMSI 312
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 58/422 (13%)
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
+PN F +L SC++ + R +H +L F IF+ LI++Y ++ A K
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
+F M +RN W S+I+ G + A LF PE D WN++VSG+ E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 217 RKLFDQMPKKDVI----SWNTMLSG----------------------------------- 237
+ F +M ++D + S+ + LS
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G V + +F M ERN+ +WN LI Y NG E L+ F RM+ G + P++ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG-LEPDEVT 250
Query: 298 IVTVLSACARLGALDFSKWVHV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
+ +V+SACA L AL +H + N ++ ++ +GNAL+DMYAKC + A VF+ M
Sbjct: 251 LASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM 310
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+++++ +++SG A A +F +M + +++ ++ T G EE L
Sbjct: 311 SIRNVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQNGENEEAL 366
Query: 417 SYFQSMAMDYSIVPQIEHYG-----------CMVDLLARAGRLAEAVDFVKRMPIEADAV 465
F+ + + SI P +G ++D+ + G + + ++M E D V
Sbjct: 367 RLFRLLKRE-SIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCV 424
Query: 466 IW 467
W
Sbjct: 425 SW 426
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
K L PN + +L +C R + ++ VH + + + N LID+Y K
Sbjct: 3 KHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGK 62
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
C +++A +F+ M ++ TWN++IS L G A LF M PD ++ +
Sbjct: 63 CDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSM 118
Query: 403 LCACTHMGLVEEGLSYFQSM 422
+ EE L YF M
Sbjct: 119 VSGFAQHDRFEESLEYFVKM 138
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 315/577 (54%), Gaps = 58/577 (10%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV---VSWNAMFNGYAQ 77
+ V SG E + ++ +++ + AR++FD++ ++ V VSWN++ Y Q
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 78 NEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ +F +M + L P+ + VL +C + A G+++H L++G ++F
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER- 195
VG A++++Y+ +E A KVF M ++VV W +M+ GY G A LFE E
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKLFDQM----------------------------- 223
+V+ W+ +++GY EA +F QM
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387
Query: 224 -----------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP--ERNVFSWNG 264
P D++ N ++ Y+ + + +F+ +P +R+V +W
Sbjct: 388 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 447
Query: 265 LIGGYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
LIGG A +G E L+ F +ML + V PN TI L ACARLGAL F + +H Y
Sbjct: 448 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 507
Query: 324 NGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
N ++ + V N LIDMY+K G ++ A VF++M ++ ++W ++++G MHGRG AL
Sbjct: 508 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 567
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
+F+EM+ G +PDG+TF+ +L AC+H G+V++G++YF M D+ +VP EHY CMVDLL
Sbjct: 568 IFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLL 627
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
+RAGRL EA++ ++ MP++ +W LL +CRVY NVEL E A +L ELE N ++
Sbjct: 628 SRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYT 687
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+LSNIY + WKDVARI+ M++TG KK PGCS ++
Sbjct: 688 LLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 724
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 243/528 (46%), Gaps = 63/528 (11%)
Query: 3 DTTGAHSEQLETTKHLHQIQTQVVTSGL-EKSDYITPRIITACAQLKQMTYARKMFDKIT 61
D T Q ++ I Q++ GL +I +T + K ++ R++ +
Sbjct: 30 DLTSTLFHQCKSLASAELIHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHP--S 87
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
V WN + F V+ L+ +M++L P+ +TFP VLK+C +I + R G
Sbjct: 88 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 147
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV---VVWTSMINGYIS 178
+H +V +GF N+FVG L+ +Y A E A +VF EM ER V V W S++ Y+
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 179 CGDIVSARCLFELAPE----------------------------------------RDVI 198
GD + A +FE E DV
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER- 257
+ N +V Y M EA K+F++M KDV+SWN M++GY+ G ++ LFE++ E
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 258 ---NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
NV +W+ +I GYA GL FE LD F++M G PN T+V++LS CA G L
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE-PNVVTLVSLLSGCALAGTLLHG 386
Query: 315 KWVHVYA-------EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWN 365
K H +A + N ++ V NALIDMY+KC + A +F+ + KD ++TW
Sbjct: 387 KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 446
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
+I G A HG AL LF +M MP+ T L AC +G + G +
Sbjct: 447 VLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL 506
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + C++D+ +++G + A M + + V W +L+
Sbjct: 507 RNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGVSWTSLM 553
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 20 QIQTQVVTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
QI V+ + E + ++ +I ++ + AR +FD + +N VSW ++ GY +
Sbjct: 500 QIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMH 559
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ +F +M+K+ +P+ TF +VL +C + +G
Sbjct: 560 GRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG 600
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 201/538 (37%), Positives = 304/538 (56%), Gaps = 22/538 (4%)
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
T+ N +N M G + V L+ M K +P+ FTF VLK+C ++N G
Sbjct: 65 TNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGV 124
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+H LV K GF ++FV T ++ YS + A+KVF +M +NVV WT MI G I G
Sbjct: 125 MIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFG 184
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNM--------IEARKLFDQMPKKDVISWN 232
A LF R ++ G++ VR + +E+ + D+ ++ +S N
Sbjct: 185 KFREAVDLF-----RGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRN 239
Query: 233 -----TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+++ Y G +EE + +F+ M E+++ W+ +I GYA+NGL E ++ F M
Sbjct: 240 VFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM-R 298
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
+ V P+ +V LS+CA LGAL+ W Y + N +G +LID YAKCG +E
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A+ V+ M KD + +N +ISGLAM+G+ A +F +M G P+ TF+G+LC CT
Sbjct: 359 EALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT 418
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H GLV++G YF SM+ D+S+ P IEHYGCMVDLLARAG L EA + +K MP++A+ ++W
Sbjct: 419 HAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVW 478
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
+LLG CR+++ +LAE L++L ELEP N ++V+LSNIY RW + +I+ + +
Sbjct: 479 GSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEK 538
Query: 528 GFKKLPGCSSIEVNEVV---MLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVVI 582
G +KLPG S +EV+ VV ++G S L +K + E+ L +P T V+
Sbjct: 539 GMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLF 596
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 172/369 (46%), Gaps = 21/369 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + V +G + ++ ++ ++ + A K+FD + +NVVSW M G +
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
R V LF + + P+ F VL++C ++ L G + + + G N+FV T+
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV--- 197
L+++Y+ ++E A VF M E+++V W++MI GY S G A LF + +V
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305
Query: 198 ------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
L + G +++ N + +++ V+ +++ YA G +EE ++
Sbjct: 306 CYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLG-TSLIDFYAKCGSMEEALGVY 364
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ M E++ +N +I G A G F +M G + PN+ T V +L C G +
Sbjct: 365 KMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG-IPPNEHTFVGLLCGCTHAGLV 423
Query: 312 D-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWN 365
D F+ H ++ + C ++D+ A+ G ++ A ++ M K ++I W
Sbjct: 424 DDGRHYFNSMSHDFSVTPTIEHYGC----MVDLLARAGFLDEAHNLIKGMPMKANVIVWG 479
Query: 366 TIISGLAMH 374
+++ G +H
Sbjct: 480 SLLGGCRLH 488
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 292/528 (55%), Gaps = 63/528 (11%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL+QI ++ L++ + + I AC L +YA +F T ++ +N +
Sbjct: 39 HLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALS 98
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + L+T+++ P+ ++ P VLK+ VK++A+ G ++H
Sbjct: 99 KTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQT---------- 148
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V +AL +MD V V TS+I Y SCG +
Sbjct: 149 VSSAL------------------DMD---VNVATSLIQMYSSCGFVS------------- 174
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ARKLFD + KDV WN M++GY G+++ +++F EMP+
Sbjct: 175 ------------------DARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQ 216
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RNV SW LI GYA E ++ F++M E V P++ ++ VLSACA LGAL+ +W
Sbjct: 217 RNVISWTTLIAGYAQTNRPHEAIELFRKMQLE-EVEPDEIAMLAVLSACADLGALELGEW 275
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H Y E +G V + NALIDMYAK G I A++VF +M K +ITW+T+I+ LA+HG
Sbjct: 276 IHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGL 335
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
G A+ +F M+ A P+ +TF+ IL AC+H+G+V+ G YF M Y I P+IEHYG
Sbjct: 336 GGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYG 395
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CM+DLLARAG L EA + MP EA+A+IW +LL + +++ ELA+LAL+ L +LEP
Sbjct: 396 CMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPG 455
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N N+V+LSN Y LG+W + ++ MR+ G KK PG S IE+N +V
Sbjct: 456 NSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIV 503
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 322/589 (54%), Gaps = 60/589 (10%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD---QNVVS 67
++ + +H + V +GL + +I I+ + + A +MFD++ + +++VS
Sbjct: 139 EIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVS 198
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMK---KLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
WN++ Y Q RT + + +M L P+ T +L +C + AL+ G+++H
Sbjct: 199 WNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHG 258
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
++NG ++FVG AL+ +Y+ + A KVF + +++VV W +M+ GY G S
Sbjct: 259 FSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDS 318
Query: 185 ARCLFELAPERD----VILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLS 236
A LF++ E D VI W+ +++GY + EA +F QM + +V++ ++LS
Sbjct: 319 ALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLS 378
Query: 237 GYANNG----------------------DVEE--------------CKR------LFE-- 252
G A+ G D E+ CK +F+
Sbjct: 379 GCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSI 438
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF-PNDATIVTVLSACARLGAL 311
E ++NV +W +IGGYA +G + L F ++ + PN T+ L ACARLG L
Sbjct: 439 EGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGEL 498
Query: 312 DFSKWVHVYAEYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+ +H YA N + V VGN LIDMY+K G I+ A VF++M +++++W ++++G
Sbjct: 499 RLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTG 558
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
MHGRG AL LF +M+ G DGITF+ +L AC+H G+V++G+ YF M + I P
Sbjct: 559 YGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITP 618
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
EHY CMVDLL RAGRL EA++ +K M +E AV+W LL + R++ N+EL E A +L
Sbjct: 619 GAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKL 678
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
TEL +N ++ +LSN+Y + RWKDVARI+ M+ TG +K PGCS I+
Sbjct: 679 TELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQ 727
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 240/494 (48%), Gaps = 64/494 (12%)
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+ V WNA+ + + + QM++L +P+ +TFP VLK+C +I +LR G
Sbjct: 88 SHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGA 147
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER---NVVVWTSMINGYI 177
+H +V NG +N+F+ +++ +Y A++ A+++F E+ ER ++V W S++ Y+
Sbjct: 148 SVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYV 207
Query: 178 SCGDIVSA-RCLF--------ELAPER--------------------------------- 195
G +A R F +L P+
Sbjct: 208 QGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVD 267
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
DV + N +VS Y M EA K+F+ + KKDV+SWN M++GY+ G + LF+ M
Sbjct: 268 DVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQ 327
Query: 256 ER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E +V +W+ +I GYA G FE LD F++M G + PN T+ ++LS CA +GAL
Sbjct: 328 EEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYG-LEPNVVTLASLLSGCASVGAL 386
Query: 312 DFSKWVHVYA-------EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LI 362
+ K H Y +N + ++ V N LIDMYAKC A +F+S++ KD ++
Sbjct: 387 LYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVV 446
Query: 363 TWNTIISGLAMHGRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
TW +I G A HG AL LF ++ + P+ T L AC +G + G
Sbjct: 447 TWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQ-LH 505
Query: 421 SMAMDYSIVPQIEHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ A+ ++ + G C++D+ +++G + A M + + V W +L+ ++
Sbjct: 506 AYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLMTGYGMHGR 564
Query: 480 VELAELALERLTEL 493
E A +++ +L
Sbjct: 565 GEEALHLFDQMQKL 578
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 295/541 (54%), Gaps = 69/541 (12%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T K L QI TQ++ +G + +++ ++++ + A K+F++I + + WN M
Sbjct: 45 DTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMI 104
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G++Q+E +V L+ +M + +A PN FT+ ++ C + LREGE++H V+ NG+
Sbjct: 105 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYC 164
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N+FV T S++N Y
Sbjct: 165 TNVFVRT-------------------------------SLVNLY---------------- 177
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
I GY VR +AR++FD++ ++++SWN++L+GY GDV+ +R+F+
Sbjct: 178 ---------AIAGGYDGVR---KARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFD 225
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPERNV SW +I G A G + L F M G V + +V LSACA LG L
Sbjct: 226 EMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGDLK 284
Query: 313 FSKWVHVYAEYNGYQGN----VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
W+H Y + + GN V + N+LI MYA CG+I+ A VF M + I+W ++I
Sbjct: 285 LGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMI 344
Query: 369 SGLAMHGRGAGALSLFHEMKNAGE---MPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+G A G AL +F M+ G PDGITFIG+LCAC+H G V++G +F+ M
Sbjct: 345 TGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKK 404
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ IVP+IEHYGCMVDLL+RAG L EA + MP++ + +W LLG CR++KN ELA
Sbjct: 405 WGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAELASH 464
Query: 486 ALERLT-ELEPKNPANF-VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
++L EL+P A + V+LSN+Y RW+DVA ++ M + G +K G S +++N V
Sbjct: 465 VAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGV 524
Query: 544 V 544
V
Sbjct: 525 V 525
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 194/581 (33%), Positives = 315/581 (54%), Gaps = 48/581 (8%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT-DQNVVSWNAMF 72
TT LH++ + ++T GL S + ++I A + T + +F + NV WN++
Sbjct: 28 TTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSII 87
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N + L+++ +++ P+ +TFP V+ +C + + +H VL GF
Sbjct: 88 RALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG 147
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------------ 180
+++++G ALI++Y ++ A KVF EM R+VV W S+I+GY + G
Sbjct: 148 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQS 207
Query: 181 -------------DIVSARCLFELAP--------------------ERDVILWNTIVSGY 207
D+++ + + E D N +++ Y
Sbjct: 208 IKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 267
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
N++ ++++F M KD +SWN+M++ Y NG + + ++FE M R++ +WN +I
Sbjct: 268 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIA 327
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
++ L RM TEG V P+ AT++++L C+ L A K +H G +
Sbjct: 328 SCVHSEDCNLGLRMISRMRTEG-VTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLE 386
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+V VGN LI+MY+KCG + N+ VF M TKD++TW +IS M+G G A+ F EM
Sbjct: 387 SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM 446
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ AG +PD + F+ I+ AC+H GLVEEGL+YF M DY I P+IEHY C+VDLL+R+
Sbjct: 447 EAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSAL 506
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L +A DF+ MP++ D+ IW LL +CR+ + E+AE ER+ EL P + +V++SNI
Sbjct: 507 LDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNI 566
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEVVMLG 547
Y LG+W V I+ +++ G KK PGCS +E+ N+V + G
Sbjct: 567 YAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFG 607
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 322/557 (57%), Gaps = 26/557 (4%)
Query: 5 TGAHSEQ-----LETTKH---LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKM 56
+G HS+ +++ H L QI +++ GL+ S ++ ++I A + +T+AR++
Sbjct: 16 SGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
FD + + WNA+ GY++N + +++++ M+ P+ FTFP +LK+C ++ L
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMIN 174
+ G +H V + GF A++FV LI LY+ + + +A VF + ER +V WT++++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 175 GYISCGDIVSARCLFELAPERDVIL-WNTIVS---GYIDVRNMIEARKLFDQMPKKDV-- 228
Y G+ + A +F + DV W +VS + ++++ + R + + K +
Sbjct: 196 AYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 229 -----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
IS NTM YA G V K LF++M N+ WN +I GYA NG E +D F
Sbjct: 256 EPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
M+ + V P+ +I + +SACA++G+L+ ++ ++ Y + Y+ +V + +ALIDM+AKC
Sbjct: 313 EMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G +E A VF+ +D++ W+ +I G +HGR A+SL+ M+ G P+ +TF+G+L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC H G+V EG +F MA D+ I PQ +HY C++DLL RAG L +A + +K MP++
Sbjct: 432 MACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
+W LL +C+ +++VEL E A ++L ++P N ++V LSN+Y W VA ++V
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 524 MRDTGFKKLPGCSSIEV 540
M++ G K GCS +EV
Sbjct: 551 MKEKGLNKDVGCSWVEV 567
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 292/502 (58%), Gaps = 39/502 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL-REGEELHCLVL 127
N + A + R F+ + + +P+ FT P +L S K+ A R G ++H +
Sbjct: 63 NILIRASASSASPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAV 122
Query: 128 KNGFRANIFVGTALIELYSTGK--------------------------------AIEAAY 155
+ GF A++FV AL+ +Y + +E+A
Sbjct: 123 RRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAK 182
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDVRNM 213
+VF EM RN V W++M+ GY + G++ AR +F+ P R+V+ WN++V+G+ +
Sbjct: 183 RVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLL 242
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
ARK+FD+MP ++++SWN ML GY+ N D++ + LF+ MPE++V SW +I GYA G
Sbjct: 243 PLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAG 302
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN--VC 331
+ + L+ F+ M TE V PN+ T+V+VLSACA L AL+ +WVH + + + N
Sbjct: 303 RYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYN 362
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+G ALIDMYAKCG + AV +FNS+D K++ WN +I+ LAM+G ++ F +MK G
Sbjct: 363 LGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNAQDSVDAFEQMKRTG 422
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
E P+ ITF+G+L AC+H GLV+EG FQSMA + P+++HYGCMVD+L RAG L EA
Sbjct: 423 EKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEA 482
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSNIYG 509
+ ++ MP+ D +++ LLG+CR++K ++AE + L + V++S+IY
Sbjct: 483 EELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYA 542
Query: 510 DLGRWKDVARIKVAMRDTGFKK 531
G+W DV + ++ +G +K
Sbjct: 543 AAGKWFDVLEARQVVQRSGIRK 564
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 180/388 (46%), Gaps = 23/388 (5%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK-KDVISWNTMLSGYANNGDVEECKRLFEEM 254
DV + N +++ Y +R+ R++F DV+SWNT++ GY G++E KR+F+EM
Sbjct: 129 DVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEM 188
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P RN SW+ ++GGYA G + F RM GR N T ++++ AR G L +
Sbjct: 189 PRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR---NVVTWNSMVTGFARHGLLPLA 245
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ ++ E N+ NA++ Y+ ++ A ++F+ M KD+++W +ISG A
Sbjct: 246 R--KMFDEMPVR--NLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQA 301
Query: 375 GRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
GR L LF M+ + P+ +T + +L AC ++ +EEG + + + +V E
Sbjct: 302 GRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEG-RWVHAFIDKHKMVLNNE 360
Query: 434 HY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+ ++D+ A+ GR AV + + W L+ + N + + A E++
Sbjct: 361 YNLGAALIDMYAKCGRTDIAVKIFNSLD-RKNVSAWNALITRLAMNGNAQDSVDAFEQMK 419
Query: 492 EL-EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
E N FV + G + R F+ + ++ EV GC+
Sbjct: 420 RTGEKPNDITFVGVLTACSHGGLVDEGRRC--------FQSMASTCGVQ-PEVKHYGCMV 470
Query: 551 RELDRKSIVRAEANMIKLLPQNNHPLTF 578
L R ++ +I+ +P + F
Sbjct: 471 DMLGRAGLLEEAEELIRSMPMAPDVMVF 498
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 169/402 (42%), Gaps = 52/402 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQN 78
Q+ Q V G ++ ++ L+ R++F +VVSWN + GY +
Sbjct: 116 QVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKC 175
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ +F +M + N ++ ++ L E+ + G N+
Sbjct: 176 GEMESAKRVFDEMPRR----NGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTW 229
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+++ ++ + A K+F EM RN+V W +M+ GY D+ AR LF++ PE+DV+
Sbjct: 230 NSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVV 289
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDVEE------- 246
W ++SGY + +LF M + + N ++LS AN +EE
Sbjct: 290 SWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAF 349
Query: 247 ------------------------CKR------LFEEMPERNVFSWNGLIGGYANNGLFF 276
C R +F + +NV +WN LI A NG
Sbjct: 350 IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNAQ 409
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNA 335
+ +DAF++M G PND T V VL+AC+ G +D + A G Q V
Sbjct: 410 DSVDAFEQMKRTGEK-PNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGC 468
Query: 336 LIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGR 376
++DM + G++E A ++ SM D++ + ++ MH R
Sbjct: 469 MVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKR 510
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 23/307 (7%)
Query: 247 CKRLFEEMPERN-VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
C F P + F N LI A++ AF +L G V P+ T+ +L +
Sbjct: 46 CAVHFPLFPSSSATFLHNILIRASASSASPRLSFAAFSSLLRCGLV-PDRFTLPPLLGSA 104
Query: 306 ARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLIT 363
+L A + VH A G+ +V V NAL+ MY + +VF S D+++
Sbjct: 105 GKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVS 164
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WNT+I G G A +F EM +G+++ ++ G ++ F M
Sbjct: 165 WNTVIGGYVKCGEMESAKRVFDEMPRR----NGVSWSTMVGGYAAAGELDVAREMFDRMP 220
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+I + + MV AR G L A MP+ + V W +L V +++ A
Sbjct: 221 ---AIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVR-NLVSWNAMLRGYSVNSDMDGA 276
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ + E K+ ++ + + Y GR++D + F+ + S+++ NEV
Sbjct: 277 RELFDVMPE---KDVVSWTCMISGYAQAGRYQDTLEL--------FRAMQTESNVQPNEV 325
Query: 544 VMLGCLS 550
M+ LS
Sbjct: 326 TMVSVLS 332
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/482 (39%), Positives = 268/482 (55%), Gaps = 42/482 (8%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N +P +L SC +N L + +H ++ +GF+ + + T LI LYS + A VF
Sbjct: 51 NYLHYPRLLSSCKHLNPLLQ---IHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVF 106
Query: 159 GEMDERNVVVWTSMINGYISC------------------------------------GDI 182
+ ++W SMI Y GD+
Sbjct: 107 DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDL 166
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
AR +F+ P+RDV+ WN +++G + AR++FDQM +D +SW TM++GYA+NG
Sbjct: 167 KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNG 226
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
E LF++M NV +WN +I Y NG E + +F +M E PN T V+VL
Sbjct: 227 CFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPNSVTFVSVL 284
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
A A L A H G+ N VGN+LIDMYAKCG ++ + +FN MD KD +
Sbjct: 285 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 344
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN ++SG A+HG G A++LF M+ + D ++F+ +L AC H GLVEEG F SM
Sbjct: 345 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 404
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ Y I P +EHY CMVDLL RAG E + F+K MP+E DA +W LLGSCR++ NV+L
Sbjct: 405 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 464
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E+AL+ L +LEP+NPA+FV+LS+IY GRW D + + M D G KK PGCS +E+
Sbjct: 465 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKN 524
Query: 543 VV 544
V
Sbjct: 525 KV 526
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 40/269 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA----------------------- 76
+I +Q + AR++FD++ DQ+ VSW M GYA
Sbjct: 187 MIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWN 246
Query: 77 -------QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
QN + + F QM+ + PN TF VL + + A REG H +++
Sbjct: 247 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 306
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +N VG +LI++Y+ ++ + K+F EMD ++ V W +M++GY G A LF
Sbjct: 307 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 366
Query: 190 ELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGYAN 240
L E D + + +++S + E RK+F M K D+ + M+
Sbjct: 367 SLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 426
Query: 241 NGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
G +E + MP E + W L+G
Sbjct: 427 AGLFDETLGFIKVMPVEPDAGVWGALLGS 455
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 49/341 (14%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A++ + + L V GLE+ +I ++ +++ + AR++FDK+ ++VV
Sbjct: 123 AYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 182
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLD-----------AMPNCF-------------- 101
+WNAM G +Q+E +F QM D A CF
Sbjct: 183 AWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN 242
Query: 102 -TFPIVLKSCVKINALREG-EELHCLVLKNGFRAN------IFVGTALIELYSTGKAIEA 153
T+ +++ + ++ +E H + L+N F N + A + + G A A
Sbjct: 243 VTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPNSVTFVSVLPAAAYLAAFREGMAFHA 301
Query: 154 AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
G + N +V S+I+ Y CG + + LF +D + WN ++SGY +
Sbjct: 302 CIIQMGFLS--NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 359
Query: 214 IEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPER-----NVFSWNG 264
A LF M + D +S+ ++LS + G VEE +++F M ++ ++ +
Sbjct: 360 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 419
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
++ GLF E L K M E P+ +L +C
Sbjct: 420 MVDLLGRAGLFDETLGFIKVMPVE----PDAGVWGALLGSC 456
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 295/527 (55%), Gaps = 40/527 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ +V GL + Y ++++ + Q++ ARK+FDKI + N+ W + A+ F
Sbjct: 825 LHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF 884
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + F++M+K PN F P +LK+C ++ R GE +H ++LKN F ++ ++ +A
Sbjct: 885 YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 944
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI +YS CG + A +F+ ++D+++
Sbjct: 945 LIYMYS-------------------------------KCGHVEKACRVFDWIVDKDLVVM 973
Query: 201 NTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEEMP- 255
N +VSGY + EA L +M K +V+SWNT+++G++ GD +F M
Sbjct: 974 NAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTA 1033
Query: 256 ---ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
E +V SW +I G+ N E DAFK ML +G P+ TI ++L AC + L
Sbjct: 1034 NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQG-FCPSSVTISSLLPACTNVANLR 1092
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H YA G + +V V +AL+DMYAKCG I A +F M ++ +TWN++I G A
Sbjct: 1093 HGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYA 1152
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG A+ LF++M+ + D +TF +L AC+H G+VE G S F M Y I P++
Sbjct: 1153 NHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRL 1212
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHY CMVDLL RAG+L+EA D +K MP+E D +W LLG+CR + N+ELAE+A E L E
Sbjct: 1213 EHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFE 1272
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
LEP++P + ++LSN+Y D GRW + A++K M+ F K PGCS IE
Sbjct: 1273 LEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 292/527 (55%), Gaps = 12/527 (2%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
VV GL +++ +I A+ ++ A +++DK+T + + N + + YA+N F
Sbjct: 139 VVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQA 198
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+F Q+ + PN +T+ +L C I+A++EG++LH V+K + + VG AL+ L
Sbjct: 199 FQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTL 258
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILW 200
YS +E A VF + +RN++ WT+ ING+ GD A F + E + +
Sbjct: 259 YSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTF 318
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEM-- 254
+ +++ V++ I+ R Q+ KK + S ++ Y+ G+++E ++ F++M
Sbjct: 319 SIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGR 378
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
NV SWN LI GY N + ++AF RM+ E V N+ T + AC+ +L +
Sbjct: 379 AASNV-SWNALIAGYVLNEKIEKAMEAFCRMVKED-VACNEFTYSNIFKACSSFPSLATT 436
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+H + + N+ V ++LI+ Y +CG +ENAV VF + D+++WN+II + +
Sbjct: 437 VQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQN 496
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G A+ L +M G P TF+ +L AC+H GLV+EG +F+SM DYSI P+ H
Sbjct: 497 GDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETH 556
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
CMVD+L RAG+L A+DF+K++ ++ A IW LL +CR N+++AE E++ +LE
Sbjct: 557 CSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLE 616
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
P + +V LSN+Y ++GRW D + M K PGCS IEVN
Sbjct: 617 PNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVN 663
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 172/366 (46%), Gaps = 20/366 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV + ++T ++ M A +F+ + +N++SW A NG+ Q+
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHG 294
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + F+ M++ PN FTF IVL SC + +G H V+K G + +FVGT
Sbjct: 295 DFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGT 354
Query: 140 ALIELYSTGKAIEAAYKVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
A+I++YS ++ A K F +M + V W ++I GY+ I A F + DV
Sbjct: 355 AIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVA 414
Query: 198 ---ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRL 250
++ I ++ ++ ++ K +V S ++++ Y G +E ++
Sbjct: 415 CNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F ++ + +V SWN +I Y+ NG ++ + ++M+ EG P T +TVLSAC+ G
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNK-PTSXTFLTVLSACSHSGL 533
Query: 311 LD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT-W 364
+ F V Y+ Q + ++D+ + G +ENA+D + K + W
Sbjct: 534 VQEGQEFFKSMVQDYS----IQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIW 589
Query: 365 NTIISG 370
+++
Sbjct: 590 RPLLAA 595
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 170/374 (45%), Gaps = 12/374 (3%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L C + + G HC V+K G ++ FV T+LI++Y+ +++A +V+ +M +
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 167 VVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+I+ Y G V A +F + + ++T+++ + + E ++L
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239
Query: 223 MPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ K +S N +L+ Y+ G +EE + +FE + +RN+ SW I G+ +G F +
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKA 299
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L F M+ E + PN+ T VL++C + + H G V VG A+ID
Sbjct: 300 LKQFS-MMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIID 358
Query: 339 MYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
MY+ G ++ A F M ++WN +I+G ++ + A+ F M +
Sbjct: 359 MYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEF 418
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T+ I AC+ + + S + ++ + +++ + G L AV +
Sbjct: 419 TYSNIFKACSSFPSLATTVQ-IHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQ 477
Query: 458 MPIEADAVIWANLL 471
+ +AD V W +++
Sbjct: 478 IS-DADVVSWNSII 490
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%)
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G FP+ + + LS C R G ++ + H + G + V +LIDMYAKCG +++
Sbjct: 107 GGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDS 166
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
AV V++ M + D T N +IS A +G A +F ++ N G P+ T+ +L C
Sbjct: 167 AVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226
Query: 409 MGLVEEG 415
+ ++EG
Sbjct: 227 ISAIQEG 233
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+H +I + G+EK Y+ ++ A+ ++ A+ +F + ++N V+WN++ GY
Sbjct: 1092 RHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGY 1151
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNGFRAN 134
A + + + LF QM++ D + TF VL +C + GE L + K
Sbjct: 1152 ANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPR 1211
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLF 189
+ +++L + AY + M E + VW +++ + G+I V+A LF
Sbjct: 1212 LEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLF 1271
Query: 190 ELAPE 194
EL PE
Sbjct: 1272 ELEPE 1276
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 284 RMLTEGRVFPNDA-TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
R ++ R F + + T + AR AL + +H + G L+ Y +
Sbjct: 791 RNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTE 850
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG + NA +F+ + ++ W + A G ALS F EM+ G P+ I
Sbjct: 851 CGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 910
Query: 403 LCACTHM 409
L AC H+
Sbjct: 911 LKACGHL 917
>gi|345505224|gb|AEN99836.1| chlororespiratory reduction 4, partial [Lepidium virginicum]
Length = 594
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 316/574 (55%), Gaps = 45/574 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQM---TYARKMFDKI--------T 61
+T+ +++I Q++T+G K+ +T RI+ A A + +AR +F++
Sbjct: 4 KTSDDVNKIHAQLITTGFIKNTNLTTRIVLAFASSRHQHLAEFARCVFEEHYVYSFPYGE 63
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
++ WNA+ ++ R ++LF M + + F+ +VLK+C ++ ++ G +
Sbjct: 64 TEDPFLWNAVMKSHSHGTDPRRALLLFCLMLENGVSVDKFSSSLVLKACSRLGFVKGGMQ 123
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H + K G +++F+ LI LY + A ++F M +R+ V + G + CG
Sbjct: 124 IHGFLRKTGLWSDLFLQNCLIALYLKCGCLGFARQIFDRMPKRDSVSYNPXXEGXVKCGL 183
Query: 182 IVSARCLFELA----------------------------------PERDVILWNTIVSGY 207
I SAR LF L PE+D+I WN+I+ GY
Sbjct: 184 IESARELFXLXXXEXKNXXSXXCMXSGYAQTSDGLXIASKLFSEMPEKDLISWNSIIDGY 243
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ +A+ L+D MP++DVI+W TM+ GY G V + K L + +P R+V ++N ++
Sbjct: 244 VKHGRXEDAKDLYDVMPRRDVITWATMIDGYVKLGFVHQAKTLLDXIPHRDVVAYNSMMA 303
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY N E L+ F M E + P++ T+V VLSA A+LG L + +++Y +
Sbjct: 304 GYVQNKYHMEALELFGDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDMYLYVVKKQFF 363
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ +LIDMY+KCG I++A+ VF ++ K + WN II GLA+HGRG A ++ ++
Sbjct: 364 LGGKLWVSLIDMYSKCGSIQHAMLVFEGLENKTIDHWNAIIGGLAIHGRGGPAFNMLLQI 423
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ + PD ITF G+L AC+H G V+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 424 ERSSIKPDDITFTGVLNACSHSGFVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGS 483
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ A + +++MPIE + VIW L +C +K E+ EL + L NP+++V+LSN+
Sbjct: 484 IELAKNLIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQADYNPSSYVLLSNM 543
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
Y G WKDV ++ M++ K+PGCSSIE++
Sbjct: 544 YASFGMWKDVRGVRTMMKERKIPKIPGCSSIELD 577
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 302/534 (56%), Gaps = 10/534 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + GLE ++ ++ A+ + A+++F ++ ++VV+WNAM G +
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V L QM++ PN T VL + + AL G+ LH ++ F + VGT
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
L+++Y+ + + A K+F M RN V W++MI GY++ + A LF+ +D
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309
Query: 198 ---ILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRL 250
+ +++ + ++ RKL + K D++ NT+LS YA G +++ R
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+EM ++ S++ ++ G NG L F+ M G + P+ T++ VL AC+ L A
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSG-IDPDLTTMLGVLPACSHLAA 428
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L H Y G+ + + NALIDMY+KCG I A +VFN MD D+++WN +I G
Sbjct: 429 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIG 488
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+HG G AL LFH++ G PD ITFI +L +C+H GLV EG +F +M+ D+SIVP
Sbjct: 489 YGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVP 548
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EH CMVD+L RAG + EA F++ MP E D IW+ LL +CR++KN+EL E +++
Sbjct: 549 RMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI 608
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L P++ NFV+LSNIY GRW D A I++ +D G KK+PGCS IE+N +V
Sbjct: 609 QSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 662
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 237/479 (49%), Gaps = 35/479 (7%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
S+ L K +HQ + ++ + R+ +C Q+ AR++FD+I + +V+
Sbjct: 20 QSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC---NQVVLARRLFDEIPNPSVIL 76
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN + YA N + L+ M L PN +T+P VLK+C + A+ +G E+H
Sbjct: 77 WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING---YISCGDIVS 184
G +++FV TAL++ Y+ + A ++F M R+VV W +MI G Y C D V
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAV- 195
Query: 185 ARCLFELAPERDVILWNTIVS-----------GYIDVRNMIEARKLFDQMPKKDVISWNT 233
+ + ++ E +TIV G+ + R+ FD V+
Sbjct: 196 -QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN----GVVVGTG 250
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+L YA + +++F+ M RN SW+ +IGGY + E L+ F +M+ + + P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDP 310
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
T+ +VL ACA+L L + +H Y G ++ +GN L+ MYAKCG+I++A+ F
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFF 370
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM---- 409
+ M+ KD ++++ I+SG +G A ALS+F M+ +G PD T +G+L AC+H+
Sbjct: 371 DEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQ 430
Query: 410 -GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
G G + A D I ++D+ ++ G+++ A + RM D V W
Sbjct: 431 HGFCSHGYLIVRGFATDTLIC------NALIDMYSKCGKISFAREVFNRMD-RHDIVSW 482
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 19/411 (4%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L++C++ +L E +++H LKN A+ V L LY + + A ++F E+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 166 VVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIV---SGYIDVRNMIEAR- 217
V++W +I Y G A + L + + ++ SG + + + +E
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 218 --KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
K+F + DV ++ YA G + E +RLF M R+V +WN +I G + GL
Sbjct: 134 HAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+ + +M EG + PN +TIV VL AL K +H Y + V VG
Sbjct: 192 DDAVQLIMQMQEEG-ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAGEM 393
L+DMYAKC + A +F+ M ++ ++W+ +I G AL LF +M K+A +
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD- 309
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
P +T +L AC + + G + V I ++ + A+ G + +A+
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRG-RKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIR 368
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
F M D+V ++ ++ C N +A L++ R+ +L +P ML
Sbjct: 369 FFDEMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGIDPDLTTML 417
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 310/562 (55%), Gaps = 44/562 (7%)
Query: 23 TQVVTSGLEKSDYITPRIITACAQLKQMTY----ARKMFDKITDQNVVS----WNAMFNG 74
++ +GL S +T +I+ A + Q TY AR +F + V WNA+
Sbjct: 1 ARLXXTGLIXSSNLTTKIVLAFSD-SQRTYLSDFARCIFHEYHHHEEVEDPFLWNAVIKS 59
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
++ R + L M + + + F+ +V K+C ++ +EG ++H + K ++
Sbjct: 60 HSHGVDPRQALFLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQIHGFLTKTVICSD 119
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP- 193
+F+ LI LY + A +VF M +R+ V + SMI+GY+ CG I SAR LF+L P
Sbjct: 120 LFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPK 179
Query: 194 ---------------------------------ERDVILWNTIVSGYIDVRNMIEARKLF 220
E+D+I WN+++ GY+ + +A+ LF
Sbjct: 180 EKKNLISWNSMIGGYAQREDGVDIASKLFAEMPEKDLISWNSLIDGYVKHGRIEDAKGLF 239
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D MP++DV++W TM+ GYA G V + K LF+ MP R+V ++N ++GGY N E L+
Sbjct: 240 DVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRDVVAYNSMMGGYVQNKYHMEALE 299
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F M E + P++ T+V VLSA A+LG L + +H+Y + + +G ALIDMY
Sbjct: 300 VFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIVEKRFLLDGKLGVALIDMY 359
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KCG I+ A+ VF ++ K + WN +I GLA+HG G A + E++ PD ITF+
Sbjct: 360 SKCGSIQQAMAVFEGIENKSIDHWNAMIGGLAVHGLGEAAFDMLMEIEKRFIKPDYITFV 419
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
G+L AC+H GLV+EGL F+ M + I P+++HYGCMVDLLAR+G + A + MPI
Sbjct: 420 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLARSGSIELAKHLISEMPI 479
Query: 461 EADAVIWANLLGSCRVYKNVELAELAL-ERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
E + VIW L +C +K E EL + E L NP+++V+LSN+Y W+DV R
Sbjct: 480 EPNDVIWRTFLNACSHHKEFETRELVVAENLILQAGYNPSSYVLLSNMYASFEMWEDVRR 539
Query: 520 IKVAMRDTGFKKLPGCSSIEVN 541
++ M++ +K+PGCS IE++
Sbjct: 540 VRTMMKERKIEKVPGCSWIELD 561
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/603 (33%), Positives = 306/603 (50%), Gaps = 55/603 (9%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + +H T V SG+E + +IT ++ +++ A ++F K+ ++NVVSW A+
Sbjct: 195 LEKAREIH---TVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAI 251
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
AQ+ L+ +M + PN TF +L SC AL G +H + + G
Sbjct: 252 IQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL 311
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG--DIVSARCLF 189
++ V ALI +Y I+ A + F M +R+V+ W++MI GY G D S +F
Sbjct: 312 ETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVF 371
Query: 190 ELAP------------------------------------------ERDVILWNTIVSGY 207
+L E D L I + Y
Sbjct: 372 QLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMY 431
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ EA ++F +M K+V++W ++L+ Y GD+ +++F EM RNV SWN +I
Sbjct: 432 AKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIA 491
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GYA +G +V + M EG P+ TI+++L AC L AL+ K VH A G +
Sbjct: 492 GYAQSGDIAKVFELLSSMKVEG-FQPDRVTIISILEACGALSALERGKLVHAEAVKLGLE 550
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ V +LI MY+KCG + A VF+ + +D + WN +++G HG G A+ LF M
Sbjct: 551 SDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRM 610
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
P+ ITF ++ AC GLV+EG F+ M D+ + P +HYGCMVDLL RAGR
Sbjct: 611 LKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGR 670
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA +F++RMP E D +W LLG+C+ + NV+LAE A + LEP N + +V LSNI
Sbjct: 671 LQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNI 730
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN----EVVMLGCLSRELDRKSIVRAEA 563
Y GRW D +++ M D G KK G SSIE++ V C E+D + AE
Sbjct: 731 YAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDS---IHAEL 787
Query: 564 NMI 566
M+
Sbjct: 788 EML 790
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 161/634 (25%), Positives = 265/634 (41%), Gaps = 109/634 (17%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H +L + + Q+ GL Y+ +I ++ + ++F ++T ++VV+
Sbjct: 87 HCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVT 146
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W++M YA N F +MK + PN TF +LK+C + L + E+H +V
Sbjct: 147 WSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVK 206
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+G ++ V TALI +YS I A ++F +M ERNVV WT++I + A
Sbjct: 207 ASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFE 266
Query: 188 LFE------LAP---------------------------------ERDVILWNTIVSGYI 208
L+E ++P E DV++ N +++ Y
Sbjct: 267 LYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYC 326
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ +AR+ FD+M K+DVISW+ M++GYA + G
Sbjct: 327 KCNCIQDARETFDRMSKRDVISWSAMIAGYAQS--------------------------G 360
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y + EV +RM EG VFPN T +++L AC+ GAL+ + +H G++
Sbjct: 361 YQDKESLDEVFQLLERMRREG-VFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419
Query: 329 NVCVGNALIDMYAKCGII----------EN---------------------AVDVFNSMD 357
+ + A+ +MYAKCG I EN A VF+ M
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMS 479
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
T+++++WN +I+G A G A L MK G PD +T I IL AC + +E G
Sbjct: 480 TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-K 538
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW-ANLLGSCRV 476
+ A+ + ++ + ++ G + EA ++ D V W A L G +
Sbjct: 539 LVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAMLAGYGQH 597
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
E +L L E P N F + + G G ++ I M++ F+ PG
Sbjct: 598 GIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED-FRMKPGKQ 656
Query: 537 SIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLP 570
GC+ L R ++ I+ +P
Sbjct: 657 H--------YGCMVDLLGRAGRLQEAEEFIQRMP 682
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 238/500 (47%), Gaps = 33/500 (6%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
+ + L +K+ + N T+ +++ C K+ +G+ +H + + G +I++G +L
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---- 197
I YS + + +VF M R+VV W+SMI Y A FE + ++
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEE 253
I + +I+ + + +AR++ + + DV +++ Y+ G++ +F++
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
M ERNV SW +I A + E + +++ML G + PN T V++L++C AL+
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG-ISPNAVTFVSLLNSCNTPEALNR 298
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ +H + G + +V V NALI MY KC I++A + F+ M +D+I+W+ +I+G A
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 374 HGRGAG-----ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM---- 424
G L M+ G P+ +TF+ IL AC+ G +E+G ++
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFE 418
Query: 425 -DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
D S+ I ++ A+ G + EA +M + V WA+LL +Y
Sbjct: 419 SDRSLQTAI------FNMYAKCGSIYEAEQVFSKME-NKNVVAWASLL---TMYIKCGDL 468
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
A + +E+ +N ++ ++ Y G V + +M+ GF+ P +I ++ +
Sbjct: 469 TSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQ--PDRVTI-ISIL 525
Query: 544 VMLGCLSRELDRKSIVRAEA 563
G LS L+R +V AEA
Sbjct: 526 EACGALS-ALERGKLVHAEA 544
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/577 (34%), Positives = 320/577 (55%), Gaps = 58/577 (10%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV---VSWNAMFNGYAQ 77
+ V SG E + ++ +++ + AR++FD++ ++ V VSWN++ Y Q
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 78 NEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ +F +M + L P+ + VL +C + A G+++H L++G ++F
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER- 195
VG A++++Y+ +E A KVF M ++VV W +M+ GY G A LFE E
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDV---- 244
+V+ W+ +++GY EA +F QM + +V++ ++LSG A+ G +
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406
Query: 245 --------------------------------EECKR------LFEEMP--ERNVFSWNG 264
+CK +F+ +P +R+V +W
Sbjct: 407 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 466
Query: 265 LIGGYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
LIGG A +G E L+ F +ML + V PN TI L ACARLGAL F + +H Y
Sbjct: 467 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 526
Query: 324 NGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
N ++ + V N LIDMY+K G ++ A VF++M ++ ++W ++++G MHGRG AL
Sbjct: 527 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 586
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
+F+EM+ +PDG+TF+ +L AC+H G+V++G++YF M D+ +VP EHY CMVDLL
Sbjct: 587 IFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLL 646
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
+RAGRL EA++ ++ MP++ +W LL +CRVY NVEL E A +L ELE N ++
Sbjct: 647 SRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYT 706
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+LSNIY + WKDVARI+ M++TG KK PGCS ++
Sbjct: 707 LLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQ 743
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 243/528 (46%), Gaps = 63/528 (11%)
Query: 3 DTTGAHSEQLETTKHLHQIQTQVVTSGL-EKSDYITPRIITACAQLKQMTYARKMFDKIT 61
D T Q ++ Q++ GL +I +T + K ++ R++ +
Sbjct: 49 DLTSTLFHQCKSLASAELTHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHP--S 106
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
V WN + F V+ L+ +M++L P+ +TFP VLK+C +I + R G
Sbjct: 107 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 166
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV---VVWTSMINGYIS 178
+H +V +GF N+FVG L+ +Y A E A +VF EM ER V V W S++ Y+
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 179 CGDIVSARCLFELAPE----------------------------------------RDVI 198
GD + A +FE E DV
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER- 257
+ N +V Y M EA K+F++M KDV+SWN M++GY+ G ++ LFE++ E
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 258 ---NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
NV +W+ +I GYA GL FE LD F++ML G PN T+V++LS CA G L
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSE-PNVVTLVSLLSGCASAGTLLHG 405
Query: 315 KWVHVYA-------EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWN 365
K H +A + N ++ V NALIDMY+KC + A +F+ + KD ++TW
Sbjct: 406 KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWT 465
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
+I G A HG AL LF +M MP+ T L AC +G + G +
Sbjct: 466 VLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL 525
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + C++D+ +++G + A M + + V W +L+
Sbjct: 526 RNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGVSWTSLM 572
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 20 QIQTQVVTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
QI V+ + E + ++ +I ++ + AR +FD + +N VSW ++ GY +
Sbjct: 519 QIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMH 578
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ +F +M+K+ +P+ TF +VL +C + +G
Sbjct: 579 GRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 299/533 (56%), Gaps = 34/533 (6%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T LH + ++ + + ++ + I+A L + Y F ++ + NV +NAM
Sbjct: 51 TINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIK 110
Query: 74 GYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G+ + + + M ++ + +P +TF ++K+C + A+ G+ +HC + K GF
Sbjct: 111 GFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 170
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++FV TAL++ YS + + A KV F+
Sbjct: 171 SHLFVQTALVDFYSKLEILSEARKV-------------------------------FDEM 199
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
ERD W ++S V +M ARKLF++MP+++ +WNTM+ GY G+VE + LF
Sbjct: 200 CERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFN 259
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+MP +++ SW +I Y+ N + + L + M G + P++ T+ TV SACA +GAL+
Sbjct: 260 QMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNG-IIPDEVTMSTVASACAHIGALE 318
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H Y G +V +G+AL+DMYAKCG ++ ++ +F + K+L WN +I GLA
Sbjct: 319 LGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLA 378
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG AL +F M+ MP+G+TFI IL ACTH GLV+EG S F SM DY I P I
Sbjct: 379 VHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDI 438
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
HYGCMVD+L+++G L EA++ +K M E +++IW LL C+++ N E+AE A+E+L
Sbjct: 439 RHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMI 498
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF-KKLPGCSSIEVNEVV 544
LEP N ++ +L ++Y + W +VA I+ M++ G KK PG S IE+ +
Sbjct: 499 LEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTI 551
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH LE K +H V++ GL YI ++ A+ + + +F K+TD+N+
Sbjct: 312 AHIGALELGKEIHHY---VMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLY 368
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WNA+ G A + + + +F M++ MPN TF +L +C + EG +
Sbjct: 369 CWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSM 428
Query: 127 LKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVS 184
++ R +I ++++ S + A ++ M+ E N ++W +++NG G+
Sbjct: 429 TRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEI 488
Query: 185 ARCLFELAPERDVIL-------WNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
A E A E+ +IL +N +VS Y + ++ +E + M +K V
Sbjct: 489 A----EDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGV 535
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 288/522 (55%), Gaps = 42/522 (8%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEE 121
NV WN M +N L M+ L A PN TF +LK+ V ++EGEE
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---- 177
+H V++ GF + FV AL+ Y + +VF EM + +V+WT +I Y+
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 178 ----------------------------SCG---DIVSAR---CLFELAP-ERDVILWNT 202
+CG D+ A+ C E + E D + +T
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
++S Y + ++ A + F + P K+++ WNTM+ + ++E K+LF+ MP+R+V SW
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSW 292
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N +IGG+A G + E L F M G V PN T+++ LSACA GALD W+H Y +
Sbjct: 293 NSMIGGFARIGQYQEALTWFHEMEFSG-VSPNALTLLSTLSACASHGALDTGAWIHAYVD 351
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
N + + ++LIDMY+KCG I+ AV +F +DL TW +I+ GLAMHGRG AL
Sbjct: 352 KNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALH 411
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
F +MK A PD +T +G+L AC H GL+++G YFQSM + +VP++EHYG MVDLL
Sbjct: 412 YFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLL 471
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
R G L EA D + MP+EA+ +IW L +CRV+ NVEL E+A RL L P++P V
Sbjct: 472 GRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARV 531
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
MLSN+Y + +W ++ ++ G KK PGCSSIEVN V
Sbjct: 532 MLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSV 573
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 42/403 (10%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+ K ++ VV +G S++++ ++ + R++FD++ +V W +
Sbjct: 105 QEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLII 164
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y F + LF M+++ P+ V+ +C + L + +HC + K+G
Sbjct: 165 RAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIE 224
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ FV + LI Y +++ AY+ F E +N+VVW +MI+ + ++ + LF+
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSM 284
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQM------PKK----------------DVIS 230
P+RDV+ WN+++ G+ + EA F +M P D +
Sbjct: 285 PDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGA 344
Query: 231 W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
W ++++ Y+ GD+++ ++FEE R++F+W ++ G A +G
Sbjct: 345 WIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHG 404
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE-YNGYQGNVCV 332
+ L F +M E +V P+D T+V VLSACA G LD W E G V
Sbjct: 405 RGEKALHYFSKM-KEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
++D+ + G ++ A D+ M + + I W +S +H
Sbjct: 464 YGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVH 506
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 287/482 (59%), Gaps = 44/482 (9%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F L++C KI L++ +H ++K + F+ T +++L ++ A +F +++
Sbjct: 10 FVTTLRNCPKIAELKK---IHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLE 66
Query: 163 ERNVVVWTSMINGYI---------------------------------SCGDIVSARC-- 187
NV + ++I Y SC ++ R
Sbjct: 67 NPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQ 126
Query: 188 -----LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+ + P+ I N ++ Y +M A +++++M ++D +SWN+++SG+ G
Sbjct: 127 QVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLG 186
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
++ + +F+EMP R + SW +I GYA G + + L F+ M G + P++ ++++VL
Sbjct: 187 QMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVG-IEPDEISVISVL 245
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA+LGAL+ KW+H Y+E +G+ N V NAL++MYAKCG I+ A +FN M KD+I
Sbjct: 246 PACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVI 305
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+W+T+I GLA HG+G A+ +F +M+ AG P+G+TF+G+L AC H GL EGL YF M
Sbjct: 306 SWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVM 365
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+DY + PQIEHYGC+VDLL R+G++ +A+D + +MP++ D+ W +LL SCR++ N+E+
Sbjct: 366 RVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEI 425
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
A +A+E+L +LEP+ N+V+L+NIY L +W+ V+ ++ +R KK PGCS IEVN
Sbjct: 426 AVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVNN 485
Query: 543 VV 544
+V
Sbjct: 486 LV 487
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 195/399 (48%), Gaps = 43/399 (10%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +I +V L +S+++ +++ C L + YA +F ++ + NV S+NA+ Y
Sbjct: 23 LKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVFSYNAIIRTYTH 82
Query: 78 NEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N H + +F QM A P+ FTFP V+KSC + R G+++H V K G + +
Sbjct: 83 NHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAI 142
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
ALI++Y+ + AY+V+ EM ER+ V W S+I+G++ G + SAR +F+ P R
Sbjct: 143 TENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMPCRT 202
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS---------------------- 230
++ W T+++GY +A +F +M + D IS
Sbjct: 203 IVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHK 262
Query: 231 -------------WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+N ++ YA G ++E LF +M E++V SW+ +IGG AN+G +
Sbjct: 263 YSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKGYA 322
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNAL 336
+ F+ M G V PN T V VLSACA G + ++ V + + L
Sbjct: 323 AIRVFEDMQKAG-VTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCL 381
Query: 337 IDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+D+ + G +E A+D M + D TWN+++S +H
Sbjct: 382 VDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIH 420
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 170/417 (40%), Gaps = 65/417 (15%)
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEECKRLFEEM 254
L N V+ + + E +K+ + K + N ML N V+ +F+++
Sbjct: 6 LENRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQL 65
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
NVFS+N +I Y +N + F +MLT P+ T V+ +CA L
Sbjct: 66 ENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLG 125
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG---- 370
+ VH + G + + NALIDMY KCG + A V+ M +D ++WN++ISG
Sbjct: 126 QQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRL 185
Query: 371 ------------------------LAMHGRG---AGALSLFHEMKNAGEMPDGITFIGIL 403
+ + RG A AL +F EM+ G PD I+ I +L
Sbjct: 186 GQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVL 245
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC +G +E G + + + + +V++ A+ G + EA +M IE D
Sbjct: 246 PACAQLGALEVG-KWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQM-IEKD 303
Query: 464 AVIWANLLG----------SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+ W+ ++G + RV+++++ A + N FV + + G
Sbjct: 304 VISWSTMIGGLANHGKGYAAIRVFEDMQKAGVT---------PNGVTFVGVLSACAHAGL 354
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLP 570
W + R MR + P ++ GCL L R V + I +P
Sbjct: 355 WNEGLRYFDVMR-VDYHLEP--------QIEHYGCLVDLLGRSGQVEQALDTILKMP 402
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/502 (38%), Positives = 281/502 (55%), Gaps = 49/502 (9%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
R + +T M+KLD + F P VLK+C +I+ R G+E+H +KNG +++FV AL
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
+++YS ++ +A +F +M ER+VV W++MI YI+ LF +R ++ W
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWT 201
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWN-TMLS------------------------ 236
+++GYI ++ E +LF +M +++V + TMLS
Sbjct: 202 AMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN 261
Query: 237 --------------GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
Y G++ + +F+ M ++V +W +I YA F
Sbjct: 262 GFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF 321
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+M G V PN+ T+V++LS CA GALD KW H Y + G + +V + ALIDMYAK
Sbjct: 322 VQMRDNG-VRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAK 380
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG I A +F+ +D+ TWN +++G MHG G AL LF EM+ G P+ ITFIG
Sbjct: 381 CGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGA 440
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+H GLV EG F+ M D+ +VP++EHYGCMVDLL RAG L EA ++ MP+
Sbjct: 441 LHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTP 500
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+ IW +L +C+++KN + ELA L LEP+N V++SNIY RW DVA ++
Sbjct: 501 NIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRK 560
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
A++DTG KK PG SSIEVN +V
Sbjct: 561 AVKDTGIKKEPGMSSIEVNGLV 582
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 189/405 (46%), Gaps = 51/405 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
Q+ + +I V +GL ++ ++ ++ + AR +FDK+++++VVSW+
Sbjct: 121 QISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWST 180
Query: 71 M-------FNGYAQNEFHRTVVV-------------------LFTQMKKLDAMPNCFTFP 104
M F G++Q R++V LF +M + + PN T
Sbjct: 181 MIRAYITLFYGFSQ----RSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITML 236
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
++ SC + A++ G+ LH +L+NGF ++ + TAL+++Y I +A +F M +
Sbjct: 237 SLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNK 296
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYIDVRNMIE 215
+V+ WT+MI+ Y I A LF + V +L V+G +D+
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFH 356
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
A + Q + DVI ++ YA GD+ +RLF E +R++ +WN ++ GY +G
Sbjct: 357 AY-IDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYG 415
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNV 330
+ L F M T G V PND T + L AC+ G + F K +H + +
Sbjct: 416 EKALKLFTEMETLG-VKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYG 474
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
C ++D+ + G+++ A + SM T ++ W +++ +H
Sbjct: 475 C----MVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
>gi|414587316|tpg|DAA37887.1| TPA: hypothetical protein ZEAMMB73_488455 [Zea mays]
Length = 622
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 298/525 (56%), Gaps = 6/525 (1%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW---NA 70
T + L Q+ +++ GL + R TAC L+ + A +TD + NA
Sbjct: 94 TVRCLAQLHARIILLGLHNHHALLARFTTACDALECPSVAASFIAALTDSHAAPLRLRNA 153
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ A++ + F +++ A+P+ F+FP +L++C +++ L G LH ++ G
Sbjct: 154 VLASLARHAPLHAALTEFNLLRQ-AALPDSFSFPCLLRACARVSCLPAGRALHAAAIRLG 212
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
A++F+ TALI+ Y +AA +F ++D + V WT++I Y++ G I+ AR LF+
Sbjct: 213 VHADLFIRTALIQFYGRCGVADAARALFYQIDIPSEVSWTAIIVAYVNNGGIIDARALFD 272
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P+R+V+ WN +V GY+ ++ AR+LFD+MP++ + +++ GYA G++E + L
Sbjct: 273 TMPQRNVVHWNVMVDGYVKCGDLEGARRLFDEMPERTATACTSLIGGYAKAGNMEAARLL 332
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+++ +R+VFSW+ +I GYA NG E L F +G + P++ +V ++SAC++LG
Sbjct: 333 FDKLEDRDVFSWSAMISGYAQNGYPGEALRTFDEFQGQG-IHPDELVVVGLMSACSQLGN 391
Query: 311 LDFSKWVHVY-AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ + W+ Y +Y+ N V L++M AKCG +E A +F SM +D+ ++ +++
Sbjct: 392 IRLASWIEDYITKYSIDMNNAHVLAGLVNMNAKCGNLERATFLFESMPVRDVFSYCSLMQ 451
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +HG A+ LF M G PD F +L AC H GLVEEG +F M Y +V
Sbjct: 452 GYCLHGSADKAVKLFSRMLLEGLTPDNAVFTIVLTACCHAGLVEEGKKFFDIMKNVYLMV 511
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P EHY C+V+LL R G L +A + MP + W LLG C+++ N+EL ++A ++
Sbjct: 512 PSGEHYACLVNLLGRCGMLEDAYWLIMSMPGKPHPGAWGALLGGCKLHCNIELGKIAAKK 571
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
L E+EP N N+V LSN+Y ++ RW DV+ ++ M K+ G
Sbjct: 572 LFEIEPDNAGNYVSLSNMYANIDRWGDVSEVRAEMTGKRITKIAG 616
>gi|224092607|ref|XP_002309680.1| predicted protein [Populus trichocarpa]
gi|222855656|gb|EEE93203.1| predicted protein [Populus trichocarpa]
Length = 500
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/475 (38%), Positives = 277/475 (58%), Gaps = 2/475 (0%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN + + N +V + ++++ + FTFPI+LK+ ++ G LH +
Sbjct: 18 WNEIIKKHVLNGDAVQAMVTYVNVQEIGFHADNFTFPILLKAAGSWSSPCIGLALHGQTI 77
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF +++FV TAL+ +Y + + A KVF +M ++VV W S+++ Y S + A
Sbjct: 78 KAGFSSHVFVQTALLNMYRSHSCVADACKVFEKMPVKDVVAWNSILDAYASTDQMDDALK 137
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+F P +D+ +N ++SGY + + AR +FD M +KD++SWN+M+S Y D+E
Sbjct: 138 VFNSMPLKDLSSFNIMISGYSSIGKTLSARSIFDNMAEKDIVSWNSMISAYIQGEDMERA 197
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF EMP +N+ +WN ++ G+ N L+ EVLD F M T P+ T+ VLSACA
Sbjct: 198 CDLFREMPAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTT-NCLPDYLTVTGVLSACAH 256
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
G+L VH+YA NG + V ALIDMYAKCG I+ + VF KD+ WN +
Sbjct: 257 SGSLKKGTEVHIYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIYCWNAL 316
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISGLA+HG G AL++F++M+ PD ITFIG+L AC+H GLV+EG F SM ++
Sbjct: 317 ISGLALHGHGYAALNIFNKMRKNHTRPDDITFIGLLSACSHSGLVQEGSQLFYSMQKEFG 376
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P+IEHYGCMVDLL+RA L A+ +K MP + I LL +C V++++E+ E +
Sbjct: 377 ISPKIEHYGCMVDLLSRARHLDCALQLIKTMPFKPGEAILGALLSACIVHQDLEVGERVV 436
Query: 488 ERLTEL-EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ ++ + +M SN+Y G+W++ + + M DTG K G S +EVN
Sbjct: 437 KLVSSRGNYLSDGELMMFSNLYASCGQWEEANKWREMMNDTGIVKTAGFSVVEVN 491
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 44/319 (13%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+A Q + M A +F ++ +N+++WN M G+ QN+ + V+ LF +MK + +P+
Sbjct: 184 MISAYIQGEDMERACDLFREMPAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPD 243
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C +L++G E+H + NG ++ V TALI++Y+ +I+ +VF
Sbjct: 244 YLTVTGVLSACAHSGSLKKGTEVHIYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFY 303
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+ +++ W ++I+G G +A +F K+
Sbjct: 304 KSQVKDIYCWNALISGLALHGHGYAALNIF---------------------------NKM 336
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV- 278
+ D I++ +LS +++G V+E +LF M + F + I Y G ++
Sbjct: 337 RKNHTRPDDITFIGLLSACSHSGLVQEGSQLFYSMQKE--FGISPKIEHY---GCMVDLL 391
Query: 279 -----LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
LD +++ P +A + +LSAC L+ + V + +GN
Sbjct: 392 SRARHLDCALQLIKTMPFKPGEAILGALLSACIVHQDLEVGERV---VKLVSSRGNYLSD 448
Query: 334 NALI---DMYAKCGIIENA 349
L+ ++YA CG E A
Sbjct: 449 GELMMFSNLYASCGQWEEA 467
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 135/328 (41%), Gaps = 79/328 (24%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q + +G ++ ++ + A K+F+K+ ++VV+WN++ + YA +
Sbjct: 72 LHGQTIKAGFSSHVFVQTALLNMYRSHSCVADACKVFEKMPVKDVVAWNSILDAYASTD- 130
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ +K ++MP LK N + G
Sbjct: 131 -----QMDDALKVFNSMP--------LKDLSSFNIMISGYS------------------- 158
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
S GK + +A +F M E+++V W SMI+ YI D+ A LF P +++I W
Sbjct: 159 -----SIGKTL-SARSIFDNMAEKDIVSWNSMISAYIQGEDMERACDLFREMPAKNIITW 212
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSG------------------- 237
NT+V G++ + E LFD+M D ++ +LS
Sbjct: 213 NTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVLSACAHSGSLKKGTEVHIYAID 272
Query: 238 ----------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
YA G +++ ++F + ++++ WN LI G A +G + L+
Sbjct: 273 NGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIYCWNALISGLALHGHGYAALNI 332
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLG 309
F +M + P+D T + +LSAC+ G
Sbjct: 333 FNKM-RKNHTRPDDITFIGLLSACSHSG 359
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AHS L+ +H + +GL S ++T +I A+ + ++F K +++
Sbjct: 255 AHSGSLKKGTEVH---IYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQVKDIY 311
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WNA+ +G A + + +F +M+K P+ TF +L +C ++EG +L +
Sbjct: 312 CWNALISGLALHGHGYAALNIFNKMRKNHTRPDDITFIGLLSACSHSGLVQEGSQLFYSM 371
Query: 127 LKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
K G I +++L S + ++ A ++ M
Sbjct: 372 QKEFGISPKIEHYGCMVDLLSRARHLDCALQLIKTM 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 128/335 (38%), Gaps = 49/335 (14%)
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+P ++ WN ++ + NGD + + + E IG +A+N F +L A
Sbjct: 10 LPSPEMRQWNEIIKKHVLNGDAVQAMVTYVNVQE---------IGFHADNFTFPILLKAA 60
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ S C L +H G+ +V V AL++MY
Sbjct: 61 G----------------SWSSPCIGLA-------LHGQTIKAGFSSHVFVQTALLNMYRS 97
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
+ +A VF M KD++ WN+I+ A + AL +F+ M + D +F +
Sbjct: 98 HSCVADACKVFEKMPVKDVVAWNSILDAYASTDQMDDALKVFNSMP----LKDLSSFNIM 153
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ + +G S F +MA I + M+ + + A D + MP +
Sbjct: 154 ISGYSSIGKTLSARSIFDNMAEK-----DIVSWNSMISAYIQGEDMERACDLFREMPAK- 207
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNP-ANFVMLSNIY---GDLGRWKDVA 518
+ + W ++ + + +L L+ E++ N +++ ++ + G K
Sbjct: 208 NIITWNTMV---KGFLQNQLYAEVLDLFDEMKTTNCLPDYLTVTGVLSACAHSGSLKKGT 264
Query: 519 RIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
+ + D G P ++ ++ G + + L
Sbjct: 265 EVHIYAIDNGLASSPHVTTALIDMYAKCGSIQQGL 299
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 279/500 (55%), Gaps = 41/500 (8%)
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
V + +M AMP+ +TFP +LK+ + ++ +H V+K G N V T+L+
Sbjct: 28 VAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTA 87
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPER--- 195
Y+ G AA + E + VVW ++I+G+ C A C F AP
Sbjct: 88 YAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTY 147
Query: 196 ------------DVILW-------------------NTIVSGYIDVRNMIEARKLFDQMP 224
DV+L N +V Y + +M A KLFD M
Sbjct: 148 VSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQ 207
Query: 225 KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKR 284
+ V+SW ++LSG G V+E + LF MPER+ SW +I GY F E L+ F+
Sbjct: 208 VRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFRE 267
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
M V ++ T+V+V++ACA+LGAL+ +WV VY G + + VGNALIDMY+KCG
Sbjct: 268 MQCSN-VSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCG 326
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
IE A+DVF M +D TW II GLA++G G A+ +FH M E PD +TFIG+L
Sbjct: 327 SIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLT 386
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
ACTH GLV++G +F SM Y+I P + HYGC++DL RAG++ EA+D + +MP+ ++
Sbjct: 387 ACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNS 446
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
IW LL +CRV+ N E+ EL ERL +++P+N + +LSNIY RW+DV R++ +
Sbjct: 447 TIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTI 506
Query: 525 RDTGFKKLPGCSSIEVNEVV 544
+ G KK PGCS IE+N ++
Sbjct: 507 MEKGIKKEPGCSLIEMNGII 526
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 179/398 (44%), Gaps = 45/398 (11%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ VV G+ ++ ++ ++TA A AR + + V WNA+ +G+ +
Sbjct: 65 VHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRR 124
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK-INALREGEELHCLVLKNGFRANIFVGT 139
F M + A P T+ VL +C K + G ++H V+ +G ++ V
Sbjct: 125 FGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVEN 184
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+++Y+ +E+A+K+F M R+VV WTS+++G G + AR LF PERD +
Sbjct: 185 ALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVS 244
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMP----------------------------------- 224
W ++ GY+ EA ++F +M
Sbjct: 245 WTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMS 304
Query: 225 ----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
K D N ++ Y+ G +E +F++M R+ F+W +I G A NG E ++
Sbjct: 305 RQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIE 364
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WVHVYAEYNGYQGNVCVGNALID 338
F RM+ P++ T + VL+AC G +D + ++ + YN NV +ID
Sbjct: 365 MFHRMIGVSET-PDEVTFIGVLTACTHAGLVDKGREFFLSMRETYN-IAPNVVHYGCIID 422
Query: 339 MYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
++ + G I A+D + M T + W T+++ +HG
Sbjct: 423 LFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHG 460
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 55/323 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ +L ++ AR +F ++ +++ VSW AM +GY Q R + +F +M+ + +
Sbjct: 217 LLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSAD 276
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
FT V+ +C ++ AL GE + + + G + + FVG ALI++YS +IE A VF
Sbjct: 277 EFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFK 336
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M R+ WT++I G V+GY + EA ++
Sbjct: 337 DMHHRDKFTWTAIILGL--------------------------AVNGYGE-----EAIEM 365
Query: 220 FDQM----PKKDVISWNTMLSGYANNGDVEECKRLFEEMPER-----NVFSWNGLIGGYA 270
F +M D +++ +L+ + G V++ + F M E NV + +I +
Sbjct: 366 FHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFG 425
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC-----ARLGALDFSKWVHVYAEYNG 325
G E LDA +M + PN T+L+AC + +G L + + + E
Sbjct: 426 RAGKITEALDAIDQM----PMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPE--- 478
Query: 326 YQGNVCVGNALIDMYAKCGIIEN 348
N V L ++YAKC E+
Sbjct: 479 ---NSTVYTLLSNIYAKCNRWED 498
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/578 (34%), Positives = 305/578 (52%), Gaps = 61/578 (10%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD---QNVVSWNAMFNGYAQN 78
V SG + ++ +++ + + +A MFD + Q++VSWN++ + Y
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 79 EFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
T + LF +M M P+ + +L +C + A G ++H +++G ++FV
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER-- 195
G A++++Y+ +E A KVF M ++VV W +M+ GY G + A LFE E
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461
Query: 196 --DVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSG------------ 237
DV+ W +++GY EA +F QM + +V++ ++LS
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521
Query: 238 -------------------------------YANNGDVEECKRLFEEMP--ERNVFSWNG 264
YA E +++F+ + +R+V +W
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581
Query: 265 LIGGYANNGLFFEVLDAFKRMLT-EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+IGGYA +G L F M + + PND T+ L ACARL AL F + VH Y
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641
Query: 324 NGYQGNVC--VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
N Y G+V V N LIDMY+K G ++ A VF++M ++ ++W ++++G MHGRG AL
Sbjct: 642 NFY-GSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDAL 700
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
+F EM+ +PDGITF+ +L AC+H G+V+ G+++F M+ D+ + P EHY CMVDL
Sbjct: 701 RVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDL 760
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
RAGRL EA+ + MP+E V+W LL +CR++ NVEL E A RL ELE N ++
Sbjct: 761 WGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSY 820
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+LSNIY + RWKDVARI+ M+ TG KK PGCS I+
Sbjct: 821 TLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQ 858
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 251/559 (44%), Gaps = 69/559 (12%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVSWN 69
L K LHQ Q + GL ++ +I YA + +++ + +V WN
Sbjct: 174 LAHAKLLHQ---QSIMQGLLF--HLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWN 228
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ R V L+ QMK L P+ +TFP V K+C +++L G LH V ++
Sbjct: 229 QLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRS 288
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV---VVWTSMINGYISCGDIVSAR 186
GF +N+FV A++ +Y A+ A+ +F ++ R + V W S+++ Y+ D +A
Sbjct: 289 GFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTAL 348
Query: 187 CLFE-------LAPE---------------------------------RDVILWNTIVSG 206
LF ++P+ DV + N +V
Sbjct: 349 ALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDM 408
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN----VFSW 262
Y M EA K+F +M KDV+SWN M++GY+ G +E LFE M E N V +W
Sbjct: 409 YAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTW 468
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA- 321
+I GYA G E LD F++M G PN T+V++LSAC +GAL K H YA
Sbjct: 469 TAVITGYAQRGQGCEALDVFRQMCDCGSR-PNVVTLVSLLSACVSVGALLHGKETHCYAI 527
Query: 322 ----EYNGYQ---GNVCVGNALIDMYAKCGIIENAVDVFNSMDTK--DLITWNTIISGLA 372
+G ++ V N LIDMYAKC E A +F+S+ K D++TW +I G A
Sbjct: 528 KFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYA 587
Query: 373 MHGRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
HG AL LF M + P+ T L AC + + G + ++
Sbjct: 588 QHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSV 647
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ C++D+ +++G + A MP + +AV W +L+ ++ E A + +
Sbjct: 648 MLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMHGRGEDALRVFDEM 706
Query: 491 TELEPKNPANFVMLSNIYG 509
++ P P L +Y
Sbjct: 707 RKV-PLVPDGITFLVVLYA 724
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 146/345 (42%), Gaps = 33/345 (9%)
Query: 99 NCFTFPIV-LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
+C T PI LK C N+L + LH + G ++ T LI Y + A +
Sbjct: 159 SCATIPITALKEC---NSLAHAKLLHQQSIMQGLLFHL--ATNLIGTYIASNSTAYAILL 213
Query: 158 FGEM--DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW--------------- 200
+ +V W +I + G S R +F L + + W
Sbjct: 214 LERLPPSPSSVFWWNQLIRRALHLG---SPRDVFTLYRQMKSLGWTPDHYTFPFVFKACA 270
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV- 259
N + +R F +V N ++S Y G + +F+++ R +
Sbjct: 271 NLSSLSLGASLHATVSRSGF----ASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQ 326
Query: 260 --FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
SWN ++ Y L F +M T + P+ ++V +L ACA L A + V
Sbjct: 327 DLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQV 386
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H ++ +G +V VGNA++DMYAKCG +E A VF M KD+++WN +++G + GR
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRL 446
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
ALSLF M D +T+ ++ G E L F+ M
Sbjct: 447 EHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQM 491
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 302/534 (56%), Gaps = 35/534 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q T K L ++ + L + + + ITAC K++ A ++ + NV +N
Sbjct: 36 KQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYN 95
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+F G+ + L+ +M + P+ +T+ ++K+ A R GE L + K
Sbjct: 96 ALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKF 153
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++ + T LI+ YS + G I AR +F
Sbjct: 154 GFGFHVKIQTTLIDFYS-------------------------------ATGRIREARKVF 182
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PERD I W T+VS Y V +M A L +QM +K+ + N +++GY G++E+ +
Sbjct: 183 DEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAES 242
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MP +++ SW +I GY+ N + E + F +M+ EG + P++ T+ TV+SACA LG
Sbjct: 243 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG-IIPDEVTMSTVISACAHLG 301
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ K VH+Y NG+ +V +G+AL+DMY+KCG +E A+ VF ++ K+L WN+II
Sbjct: 302 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 361
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA HG AL +F +M+ P+ +TF+ + ACTH GLV+EG ++SM DYSIV
Sbjct: 362 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 421
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+EHYG MV L ++AG + EA++ + M E +AVIW LL CR++KN+ +AE+A +
Sbjct: 422 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 481
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL-PGCSSIEVNE 542
L LEP N + +L ++Y + RW+DVA I+ MR+ G +K+ PG SSI +++
Sbjct: 482 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDK 535
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 316/575 (54%), Gaps = 46/575 (8%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ-MTYARKMFDKITDQNV 65
++S L + K LH Q+V + + +I A Q + A +F++I +
Sbjct: 22 SNSTSLNSIKELH---AQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTL 78
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+ WN M +G ++++ + + M + TF + KSC +++ +R+G+ +
Sbjct: 79 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 138
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY--------- 176
+K GF + +FV ALI +Y + A KVF M ER+VV W S+I GY
Sbjct: 139 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 198
Query: 177 ----------------ISCGDIVSARCLF--------------ELAPERDVILWNTIVSG 206
++ +SA C E D+ L NT++
Sbjct: 199 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 258
Query: 207 YIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
Y R MI+ A ++F QM +K+++SWN M+ GYA G++ K+LF EMP R+V SW +
Sbjct: 259 Y-GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSM 317
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GY+ E + F+ M+ V P++ T+ T LSACA LG+LD + VH Y +
Sbjct: 318 IIGYSLAKQHAEAVKLFQEMMV-SMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHD 376
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ +V VGN+LIDMY KCG++E A+ VFN M T+D ++W +IISGLA++G AL++F
Sbjct: 377 IKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFD 436
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+M G P TF+G+L AC H+GLV++G+ +F+SM Y + P+++HYGC+VDLL R+
Sbjct: 437 QMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRS 496
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G L A +F+K+MPI D VIW LL +C+++ N+ LAE+ ++L L+P N N+V+ S
Sbjct: 497 GYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSS 556
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ Y RW DV +I+ M T +K SSIEV
Sbjct: 557 STYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 591
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 287/483 (59%), Gaps = 39/483 (8%)
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINAL-REGEELHCLVLKNGFRANIFVGTALIELYS 146
F+ + + +P+ FT P +L S K+ A R G ++H ++ GF A++FV AL+ +Y
Sbjct: 82 FSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYG 141
Query: 147 TGK--------------------------------AIEAAYKVFGEMDERNVVVWTSMIN 174
+ +E+A +VF EM RN V W++M+
Sbjct: 142 ALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVG 201
Query: 175 GYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
GY + G++ AR +F+ P R+V+ WN++V+G+ + ARK+FD+MP ++++SWN
Sbjct: 202 GYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWN 261
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
ML GY+ N D++ + LF+ MPE++V SW +I GYA G + + L+ F+ M TE V
Sbjct: 262 AMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQ 321
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN--VCVGNALIDMYAKCGIIENAV 350
PN+ T+V+VLSACA L AL+ +WVH + + + N +G ALIDMYAKCG + AV
Sbjct: 322 PNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAV 381
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
+FNS+D K++ WN +I+ LAM+G ++ F +MK GE P+ ITF+G+L AC+H G
Sbjct: 382 KIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGG 441
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
LV+EG FQSMA + P+++HYGCMVD+L RAG L EA + ++ MP+ D +++ L
Sbjct: 442 LVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGAL 501
Query: 471 LGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LG+CR++K ++AE + L + V++S+IY G+W DV + ++ +G
Sbjct: 502 LGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSG 561
Query: 529 FKK 531
+K
Sbjct: 562 IRK 564
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 179/388 (46%), Gaps = 23/388 (5%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK-KDVISWNTMLSGYANNGDVEECKRLFEEM 254
DV + N +++ Y +R+ R++F DV+SWNT++ GY G++E KR+F+EM
Sbjct: 129 DVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEM 188
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P RN SW+ ++GGYA G + F RM GR N T ++++ AR G L +
Sbjct: 189 PRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR---NVVTWNSMVTGFARHGLLPLA 245
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ ++ E N+ NA++ Y+ ++ A ++F+ M KD+++W +ISG A
Sbjct: 246 R--KMFDEMPVR--NLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQA 301
Query: 375 GRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
GR L LF M+ + P+ +T + +L AC ++ +EEG + + + +V E
Sbjct: 302 GRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEG-RWVHAFIDKHKMVLNNE 360
Query: 434 HY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+ ++D+ A+ GR AV + + W L+ + N + A E++
Sbjct: 361 YNLGAALIDMYAKCGRTDIAVKIFNSLD-RKNVSAWNALITRLAMNGNARDSVDAFEQMK 419
Query: 492 EL-EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
E N FV + G + R F+ + ++ EV GC+
Sbjct: 420 RTGEKPNDITFVGVLTACSHGGLVDEGRRC--------FQSMASTCGVQ-PEVKHYGCMV 470
Query: 551 RELDRKSIVRAEANMIKLLPQNNHPLTF 578
L R ++ +I+ +P + F
Sbjct: 471 DMLGRAGLLEEAEELIRSMPMAPDVMVF 498
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 169/402 (42%), Gaps = 52/402 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQN 78
Q+ Q V G ++ ++ L+ R++F +VVSWN + GY +
Sbjct: 116 QVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKC 175
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ +F +M + N ++ ++ L E+ + G N+
Sbjct: 176 GEMESAKRVFDEMPRR----NGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTW 229
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+++ ++ + A K+F EM RN+V W +M+ GY D+ AR LF++ PE+DV+
Sbjct: 230 NSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVV 289
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDVEE------- 246
W ++SGY + +LF M + + N ++LS AN +EE
Sbjct: 290 SWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAF 349
Query: 247 ------------------------CKR------LFEEMPERNVFSWNGLIGGYANNGLFF 276
C R +F + +NV +WN LI A NG
Sbjct: 350 IDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNAR 409
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNA 335
+ +DAF++M G PND T V VL+AC+ G +D + A G Q V
Sbjct: 410 DSVDAFEQMKRTGEK-PNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGC 468
Query: 336 LIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGR 376
++DM + G++E A ++ SM D++ + ++ MH R
Sbjct: 469 MVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKR 510
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 25/283 (8%)
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQG 328
A+ GL F AF +L G V P+ T+ +L + +L A + VH A G+
Sbjct: 73 ASPGLSFA---AFSSLLRCGLV-PDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLA 128
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+V V NAL+ MY + +VF S D+++WNT+I G G A +F EM
Sbjct: 129 DVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEM 188
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+G+++ ++ G ++ F M +I + + MV AR G
Sbjct: 189 PRR----NGVSWSTMVGGYAAAGELDVAREMFDRMP---AIGRNVVTWNSMVTGFARHGL 241
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L A MP+ + V W +L V +++ A + + E K+ ++ + +
Sbjct: 242 LPLARKMFDEMPVR-NLVSWNAMLRGYSVNSDMDGARELFDVMPE---KDVVSWTCMISG 297
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
Y GR++D + F+ + S+++ NEV M+ LS
Sbjct: 298 YAQAGRYQDTLEL--------FRAMQTESNVQPNEVTMVSVLS 332
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 273/500 (54%), Gaps = 67/500 (13%)
Query: 45 AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
A L ++ Y+ +F + + +V W A+ +G+A H + + QM PN FTF
Sbjct: 20 ASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFS 79
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
+LK C + G+ LH +K GF ++++V T
Sbjct: 80 SILKLC----PIEPGKALHSQAVKLGFDSDLYVRTG------------------------ 111
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
+++ Y GD+VSA+ +LFD MP
Sbjct: 112 -------LLDVYARGGDVVSAQ-------------------------------QLFDTMP 133
Query: 225 KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKR 284
+K ++S ML+ YA +G+++ + LF+ M ER+ WN +I GY NG+ E L F+R
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
ML + + PN+ T+++VLSAC +LGAL+ +WVH Y E NG Q NV VG AL+DMY+KCG
Sbjct: 194 ML-KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
+E+A VF+ +D KD++ WN++I G AM G AL LF M G P ITFIGIL
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC H G V EG F M +Y I P+IEHYGCMV+LL RAG + +A + VK M IE D
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
V+W LLG+CR++ + L E +E L + N +++LSNIY +G W VAR++ M
Sbjct: 373 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 432
Query: 525 RDTGFKKLPGCSSIEVNEVV 544
+D+G KK PGCSSIEVN V
Sbjct: 433 KDSGVKKEPGCSSIEVNNKV 452
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 14/256 (5%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
Q+ + EKS ++T A+ ++ AR +FD + +++ V WN M +GY QN
Sbjct: 127 QLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNE 186
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
+VLF +M K A PN T VL +C ++ AL G +H + NG + N+ VGTAL++
Sbjct: 187 ALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 246
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIVSARCLFELAPERDV 197
+YS ++E A VF ++D+++VV W SMI GY G + + C L P
Sbjct: 247 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTN-- 304
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFE 252
I + I+S + E +F++M + + + M++ G VE+ L +
Sbjct: 305 ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVK 364
Query: 253 EMP-ERNVFSWNGLIG 267
M E + W L+G
Sbjct: 365 NMNIEPDPVLWGTLLG 380
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 47/286 (16%)
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D+ P V + + YA+ G ++ LF +VF W +I G+A GL + L+
Sbjct: 3 DKKPPAXV-PLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALN 61
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
+ +MLT+G V PN T ++L C ++ K +H A G+ ++ V L+D+Y
Sbjct: 62 FYAQMLTQG-VEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVY 116
Query: 341 AKCGIIENAVDVFNSMDTKDLIT-------------------------------WNTIIS 369
A+ G + +A +F++M K L++ WN +I
Sbjct: 117 ARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMID 176
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDY 426
G +G AL LF M A P+ +T + +L AC +G +E G SY ++ + +
Sbjct: 177 GYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF 236
Query: 427 SIVPQIEHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++ H G +VD+ ++ G L +A ++ + D V W +++
Sbjct: 237 NV-----HVGTALVDMYSKCGSLEDARLVFDKID-DKDVVAWNSMI 276
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE+ + +H + + +G++ + ++ ++ ++ + AR +FDKI D++VV+WN+M
Sbjct: 219 LESGRWVH---SYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSM 275
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNG 130
GYA F + + LF M ++ P TF +L +C + EG ++ + + + G
Sbjct: 276 IVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYG 335
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLF 189
I ++ L +E AY++ M+ E + V+W +++ G I +
Sbjct: 336 IEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIV 395
Query: 190 ELAPERDV 197
EL ++++
Sbjct: 396 ELLVDQNL 403
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 292/520 (56%), Gaps = 34/520 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNV 65
+E+ ++ + Q ++ +GL + +++ A + K ++YA + ++I N
Sbjct: 46 TERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNG 105
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+ N++ YA + + +F +M P+ ++F VLK+C EG ++H L
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K+G ++FV L+ +Y E A KV M
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM------------------------ 201
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
P RD + WN+++S Y++ + EAR LFD+M +++V SWN M+SGYA G V+
Sbjct: 202 -------PVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVK 254
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E K +F+ MP R+V SWN ++ YA+ G + EVL+ F +ML + P+ T+V+VLSAC
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LG+L +WVHVY + +G + + AL+DMY+KCG I+ A++VF + +D+ TWN
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWN 374
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+IIS L++HG G AL +F EM G P+GITFIG+L AC H+G++++ F+ M+
Sbjct: 375 SIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y + P IEHYGCMVDLL R G++ EA + V +P + +++ +LLG+C+ + +E AE
Sbjct: 435 YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAER 494
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
RL EL ++ + + +SN+Y GRW+ V + MR
Sbjct: 495 IANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 185/483 (38%), Positives = 279/483 (57%), Gaps = 11/483 (2%)
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN A + L+ M + + P+ F+FP +LKSC ++ G++LHC V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV--VVWTSMINGYISCGDIVS 184
++ G A FV TALI +Y +E A KVF E + V + ++I+GY + +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIE----ARKLFDQMPK----KDVISWNTMLS 236
A +F E V + + + G + + + E R L + K +V N+ ++
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y G VE +RLF+EMP + + +WN +I GY+ NGL ++VL+ F++M + G V P+
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSG-VCPDPF 255
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+V+VLS+CA LGA + V E NG+ NV + NALI MYA+CG + A VF+ M
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
K L++W +I MHG G L+LF +M G PDG F+ +L AC+H GL ++GL
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
F++M +Y + P EHY C+VDLL RAGRL EA++F+ MP+E D +W LLG+C++
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+KNV++AELA ++ E EP N +V++SNIY D + + RI+V MR+ F+K PG S
Sbjct: 436 HKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 495
Query: 537 SIE 539
+E
Sbjct: 496 YVE 498
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 164/372 (44%), Gaps = 21/372 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYA 76
Q+ V+ G E ++ +I+ + + ARK+F++ + Q V +NA+ +GY
Sbjct: 70 QQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYT 129
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N +F +MK+ + T ++ C L G LH +K G + +
Sbjct: 130 ANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVA 189
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V + I +Y ++E+ ++F EM + ++ W ++I+GY G LFE
Sbjct: 190 VLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSG 249
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPK--------KDVISWNTMLSGYANNGDVEECK 248
V + + + A+K+ ++ + +V N ++S YA G++ + +
Sbjct: 250 VCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKAR 309
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ MP +++ SW +IG Y +G+ L F M+ G + P+ A V VLSAC+
Sbjct: 310 AVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRG-IRPDGAVFVMVLSACSHS 368
Query: 309 GALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLI 362
G D F Y G + C L+D+ + G ++ A++ +SM + D
Sbjct: 369 GLTDKGLELFRAMKREYKLEPGPEHYSC----LVDLLGRAGRLDEAMEFIDSMPVEPDGA 424
Query: 363 TWNTIISGLAMH 374
W ++ +H
Sbjct: 425 VWGALLGACKIH 436
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 183/474 (38%), Positives = 285/474 (60%), Gaps = 23/474 (4%)
Query: 89 TQMKKLDAM-------PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
TQ+KK+ A + F +L SC + + L+ K NIF A+
Sbjct: 24 TQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYA----TLLFKQLLHPNIFTYNAI 79
Query: 142 IELYSTGKAIEAAYKVFGEM--DERNVVVWTSMINGYI--SCGDIVSARC-------LFE 190
I Y+ + +A VF +M N V ++ SC I+ R +++
Sbjct: 80 IRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYK 139
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ I N ++ Y ++ A K+F++M +DVISWN+++ GY G + + L
Sbjct: 140 FGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSAREL 199
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F++MP R + SW +I GY G + + LD F+ M G + P++ +I+ VL ACA+LGA
Sbjct: 200 FDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVG-IEPDEISIIAVLPACAQLGA 258
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ KW+H+YA+ NG+ + NALI+MYAKCG I+ A ++F+ + KD+I+W+T+I G
Sbjct: 259 LEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGG 318
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LA HG+G A+ LF EM P+ ITF+G+L AC+H GL +EGL YF M+ Y I P
Sbjct: 319 LANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEP 378
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+IEHYGC++DLL R+G L +A+D + +MPI+ D+ IW +LL SCR+++N+++A +A+++L
Sbjct: 379 EIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQL 438
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP+ N+V+L+N+Y + G+W+DV+ I+ +R+ KK PG SSIEVN VV
Sbjct: 439 MELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVV 492
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 59/409 (14%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
L +I VV L +S+++ +++ +C L ++YA +F ++ N+ ++NA+ YA
Sbjct: 25 QLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYA 84
Query: 77 QNEFHRTVVVLFTQM---KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
N H + + +F QM P+ FTFP V+KSC I R G ++H LV K G
Sbjct: 85 HNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADF 144
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ ALI++Y+ + A KVF EM R+V+ W S+I GY+ G + SAR LF+ P
Sbjct: 145 HCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMP 204
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS------------------W 231
R ++ W T+++GY + +A +F +M + D IS W
Sbjct: 205 VRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKW 264
Query: 232 -----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
N ++ YA G ++E LF+++ E++V SW+ +IGG AN+G
Sbjct: 265 IHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGK 324
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--------FSKWVHVYAEYNGY 326
+E + F+ M + RV PN+ T + VL AC+ G D S H+ E Y
Sbjct: 325 GYEAIQLFEEM-CKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHY 383
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
LID+ + G + A+D + M K D WN+++S +H
Sbjct: 384 -------GCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIH 425
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 30/252 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K +H + +G + I +I A+ + A +FD++ +++V+SW+ M
Sbjct: 259 LEVGKWIHMYADK---NGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTM 315
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNG 130
G A + + LF +M K+ PN TF VL +C EG + +
Sbjct: 316 IGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYH 375
Query: 131 FRANIFVGTALIELYST----GKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------ 180
I LI+L G+A++ K+ + D R +W S+++ SC
Sbjct: 376 IEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSR---IWNSLLS---SCRIHRNLQ 429
Query: 181 -DIVSARCLFELAPERD---VILWNTIV-----SGYIDVRNMIEARKLFDQMPKKDVISW 231
+++ + L EL PE V+L N ++R +I +++ + P I
Sbjct: 430 IAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRI-KKTPGSSSIEV 488
Query: 232 NTMLSGYANNGD 243
N ++ + ++ D
Sbjct: 489 NNVVQEFVSSDD 500
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 311/647 (48%), Gaps = 124/647 (19%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI-------------------- 60
+ ++TSG + + +I R+I + +TYARK+FDKI
Sbjct: 27 VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86
Query: 61 -------------TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
T ++ VS+NAM Y+ + LF QMK+ +P+ FTF VL
Sbjct: 87 VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146
Query: 108 KSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELY---------STGKAIEAAYKV 157
+ I + R + LHC V+K G V AL+ Y + + + +A KV
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206
Query: 158 FGEMDERNV---------------------------------VVWTSMINGYI------- 177
F E + + V W +MI+GY+
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266
Query: 178 -------------------------SCGDIVSARCLFE-------------LAPERDVIL 199
+CG +F + P +L
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVL 326
Query: 200 W--NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
N +++ Y MIEAR++FD+MP +D+ISWN +LSGY N +EE +F EMPER
Sbjct: 327 SVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER 386
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
NV +W +I G A NG E L F +M +EG + P D ++AC+ LG+LD + +
Sbjct: 387 NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEG-LEPCDYAFAGAITACSVLGSLDNGQQI 445
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H G+ + GNALI MY++CG++E+A VF +M D ++WN +I+ LA HG G
Sbjct: 446 HSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHG 505
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A+ LF +M +PD ITF+ IL AC H GL++EG YF +M Y I P +HY
Sbjct: 506 VKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYAR 565
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++DLL RAG +A +K MP EA A IW LL CR++ N+EL A +RL EL P
Sbjct: 566 LIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQ 625
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++LSN+Y LG+W +VAR+++ MR+ G KK PGCS +EV +V
Sbjct: 626 DGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMV 672
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 139/312 (44%), Gaps = 19/312 (6%)
Query: 15 TKHLHQIQTQVVTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
TK+ I+ + V + D I+ +++ +++ A +F ++ ++NV++W M +
Sbjct: 337 TKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMIS 396
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G AQN F + LF QMK P + F + +C + +L G+++H V++ G +
Sbjct: 397 GLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDS 456
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ G ALI +YS +E+A VF M + V W +MI G V A LFE
Sbjct: 457 GLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMM 516
Query: 194 ERDV----ILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNG 242
+ D+ I + TI++ + E R FD M P +D + ++ G
Sbjct: 517 KEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGED--HYARLIDLLCRAG 574
Query: 243 DVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP-NDATIVT 300
+ + + + MP E W L+ G +G + A R+L + P D T +
Sbjct: 575 MFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLL---ELIPGQDGTYII 631
Query: 301 VLSACARLGALD 312
+ + A LG D
Sbjct: 632 LSNMYAALGQWD 643
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 278/488 (56%), Gaps = 7/488 (1%)
Query: 55 KMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
++ ++ WN + +A R + F M++ P+ +TFP VLK+C
Sbjct: 68 RLLPGPASRDAFPWNTLIRLHAPAS-PRNALAYFACMRRAAVEPDAYTFPAVLKACA-CG 125
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
L G +H ++ G ++F AL+ Y + KVF + R++V W SM+
Sbjct: 126 VL--GLPVHAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVF-DHGARDLVSWNSMVA 182
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNT 233
GY++CG++ A+ LF+ P RD W T++ Y ++ AR+LFD+ P +D++ W +
Sbjct: 183 GYVACGELELAQELFDGMPLRDAFSWATMIDAYGKRSGGVDRARELFDETPNRDLVCWCS 242
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
M+ GYA G ++E + LFEEMPERNV SW+ ++ GY G E L+ F+RML G + P
Sbjct: 243 MIDGYARQGRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCG-IKP 301
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ V +ACA+LGAL+ +W+H Y E +V V ALIDMY KCG ++ +F
Sbjct: 302 DRVAAVGAFTACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIF 361
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
SM K ++TWN +I GL H G A+ LF++M+ G D ++ + +L ACTH GL+
Sbjct: 362 ESMPDKSVVTWNVMIIGLGTHSCGLHAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGLIS 421
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EGL F M D+ + P++EHYG +VDLL RAG L A ++ MP+E +W +LL +
Sbjct: 422 EGLGIFHRMRKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAA 481
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
CR ++ VELAEL++ERL L + +V+LSNIY D G W V RI+ M G KK
Sbjct: 482 CRSHRCVELAELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKDI 541
Query: 534 GCSSIEVN 541
G S IEV+
Sbjct: 542 GRSVIEVD 549
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 299/574 (52%), Gaps = 64/574 (11%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-- 97
+I+ + ++ A+++FD++ +N++SWN+M GY QN R + F +M + D +
Sbjct: 108 MISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSW 167
Query: 98 -------------------------PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
PN ++ +L + + E L
Sbjct: 168 NLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRL----FDQMPS 223
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
NI A+I Y I+ A ++F EM ER+ V WT+MINGY+ G + AR L
Sbjct: 224 RNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEM 283
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQ------------------------------ 222
P R++ ++SGYI + EAR+ FD+
Sbjct: 284 PYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSK 343
Query: 223 -MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
M KD+++WNTM+S YA G ++ ++FEEM ER++ SWN LI G+ NG + L +
Sbjct: 344 RMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKS 403
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F M EG+ P+ + LS+CA + AL +H GY + V NALI MYA
Sbjct: 404 FALMGHEGKK-PDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYA 462
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
KCG I A VFN + D+I+WN++I G A++G G AL LF EM + G PD +TFIG
Sbjct: 463 KCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIG 522
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
IL AC H G+V+ GL F+ M+ Y+I P EHY CMVDLL R GRL EA + V+ M ++
Sbjct: 523 ILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVK 582
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
A A +W LLG+CR + N+EL LA +L+E EP +N+V+LSNI+ + RW +V ++
Sbjct: 583 ATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVR 642
Query: 522 VAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDR 555
+ M + K PGCS +EV V G LS + R
Sbjct: 643 MLMNASSTVKEPGCSWVEVRNQVH-GFLSDDSTR 675
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 235/498 (47%), Gaps = 66/498 (13%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ +I+ A+ ++ AR +FDK+ +N+VSWN M +GY N LF
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 91 MKKLDA-----MPNCFT--------------FPIVLKSCVKI-NALREGEELHCLV--LK 128
M + D M C+T P + V NA+ G V K
Sbjct: 63 MPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAK 122
Query: 129 NGFR----ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
F N+ +++ Y+ + + + F EMDER+VV W M++G+I GD+ S
Sbjct: 123 RLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDS 182
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
A F+ + +V+ W T++SG+ N++E+R+LFDQMP ++++SWN M+S Y ++
Sbjct: 183 AWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEI 242
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE--GRVFPNDATIVTVL 302
+E RLFEEMPER+ SW +I GY G LD + +L E R +++
Sbjct: 243 DEASRLFEEMPERDSVSWTTMINGYVRIG----KLDEARELLNEMPYRNIGAQTAMISGY 298
Query: 303 SACAR----------LGALDFSKW---VHVYAEYNGYQGNVCVG-----------NALID 338
C + +G D W + YA + +C+ N +I
Sbjct: 299 IQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMIS 358
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
YA+ G ++ AV +F M +DL++WN++I+G ++G+ AL F M + G+ PD ++
Sbjct: 359 CYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLS 418
Query: 399 FIGILCACTHMGLVEEGLSYFQSMA----MDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
F L +C + ++ G Q + ++Y +V ++ + A+ GR+ EA
Sbjct: 419 FACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNN-----ALITMYAKCGRILEA-GL 472
Query: 455 VKRMPIEADAVIWANLLG 472
V AD + W +L+G
Sbjct: 473 VFNGICHADVISWNSLIG 490
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 187/395 (47%), Gaps = 50/395 (12%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
N ++I +Y+ I AA +F +M RN+V W +M++GY+ G A LF + P
Sbjct: 5 NTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMP 64
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMP---KKDVISWNTMLSGYANNGDVEECKRL 250
RD+ W +++ Y + +AR+LFD +P +K V WN M+SGY G V E KRL
Sbjct: 65 RRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRL 124
Query: 251 FEEMPERNVFSWNGLIGGYANN-----GL-FFEVLDAFK----RMLTEG----------- 289
F+EMP +N+ SWN ++ GY N GL FF +D ++ +G
Sbjct: 125 FDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAW 184
Query: 290 RVF-----PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
+ F PN + VT+LS AR G + S+ ++ + N+ NA+I Y +
Sbjct: 185 KFFQETQKPNVVSWVTMLSGFARNGNILESR--RLFDQMPSR--NIVSWNAMISAYVQRC 240
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAGEMPDGITFIGI 402
I+ A +F M +D ++W T+I+G G+ A L +EM +N G +
Sbjct: 241 EIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQT------AM 294
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ V+E +F + + +V + M+ A GR+ EA+ KRM +
Sbjct: 295 ISGYIQCNKVDEARRFFDEIGT-WDVVC----WNAMIAGYAHHGRINEALCLSKRM-VNK 348
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
D V W N + SC Y V + A++ E+ ++
Sbjct: 349 DMVTW-NTMISC--YAQVGQMDRAVKIFEEMGERD 380
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
Query: 34 DYITPRIITAC-AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMK 92
D +T + +C AQ+ QM A K+F+++ ++++VSWN++ G+ N + + F M
Sbjct: 349 DMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMG 408
Query: 93 KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
P+ +F L SC I AL+ G +LH +V+K G+ + V ALI +Y+ I
Sbjct: 409 HEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRIL 468
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
A VF + +V+ W S+I GY G A LFE
Sbjct: 469 EAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFE 506
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ LHQ+ VV G + +IT A+ ++ A +F+ I +V+SWN++
Sbjct: 432 LQVGNQLHQV---VVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSL 488
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNG 130
GYA N + + + LF +M P+ TF +L +C + G +L C+
Sbjct: 489 IGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCM----- 543
Query: 131 FRANIFVGTALIELYS--------TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
+ ++ L E Y+ G+ EA V G + VW +++ + G++
Sbjct: 544 --SKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNL 601
Query: 183 ----VSARCLFELAPER 195
++A L E P +
Sbjct: 602 ELGRLAAHKLSEFEPHK 618
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 302/534 (56%), Gaps = 35/534 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q T K L ++ + L + + + ITAC K++ A ++ + NV +N
Sbjct: 781 KQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYN 840
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+F G+ + L+ +M + P+ +T+ ++K+ A R GE L + K
Sbjct: 841 ALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQAHIWKF 898
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++ + T LI+ YS + G I AR +F
Sbjct: 899 GFGFHVKIQTTLIDFYS-------------------------------ATGRIREARKVF 927
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PERD I W T+VS Y V +M A L +QM +K+ + N +++GY G++E+ +
Sbjct: 928 DEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAES 987
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MP +++ SW +I GY+ N + E + F +M+ EG + P++ T+ TV+SACA LG
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG-IIPDEVTMSTVISACAHLG 1046
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ K VH+Y NG+ +V +G+AL+DMY+KCG +E A+ VF ++ K+L WN+II
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1106
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA HG AL +F +M+ P+ +TF+ + ACTH GLV+EG ++SM DYSIV
Sbjct: 1107 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 1166
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+EHYG MV L ++AG + EA++ + M E +AVIW LL CR++KN+ +AE+A +
Sbjct: 1167 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 1226
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL-PGCSSIEVNE 542
L LEP N + +L ++Y + RW+DVA I+ MR+ G +K+ PG SSI +++
Sbjct: 1227 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDK 1280
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 310/560 (55%), Gaps = 42/560 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVS 67
+ + + L QI +V +GL + + +I + + + YA K+FD+I +V
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N + G AQ+ V L+T+M+K P+ +TF VLK+C K+ G H V+
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVV 139
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
++GF N +V ALI ++ +CGD+ A
Sbjct: 140 RHGFVLNEYVKNALILFHA-------------------------------NCGDLGIASE 168
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ + + + W+++ SGY + EA +LFD+MP KD ++WN M++G +++
Sbjct: 169 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA 228
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ LF+ E++V +WN +I GY N G E L FK M G P+ TI+++LSACA
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE-HPDVVTILSLLSACAV 287
Query: 308 LGALDFSKWVHVYA-EYNGYQGNVCVG----NALIDMYAKCGIIENAVDVFNSMDTKDLI 362
LG L+ K +H+Y E ++ VG NALIDMYAKCG I+ A++VF + +DL
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TWNT+I GLA+H G++ +F EM+ P+ +TFIG++ AC+H G V+EG YF M
Sbjct: 348 TWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y+I P I+HYGCMVD+L RAG+L EA FV+ M IE +A++W LLG+C++Y NVEL
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+ A E+L + ++V+LSNIY G+W V +++ DT KK G S IE ++
Sbjct: 467 GKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Query: 543 --VVMLGCLSRELDRKSIVR 560
++M LS E + +S R
Sbjct: 527 DKLMMRYLLSSEPESRSRGR 546
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRI-----------------ITACAQLK 48
G SE + + H++ +TSG K I + IT C + K
Sbjct: 164 GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCK 223
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+M AR++FD+ T+++VV+WNAM +GY + + + +F +M+ P+ T +L
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 109 SCVKINALREGEELHCLVLKNG-FRANIFVGT----ALIELYSTGKAIEAAYKVFGEMDE 163
+C + L G+ LH +L+ ++I+VGT ALI++Y+ +I+ A +VF + +
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWNTIV-----------SGYIDVR 211
R++ W ++I G + A E+ E + + +W V SG +D
Sbjct: 344 RDLSTWNTLIVGLA----LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD-- 397
Query: 212 NMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
E RK F M + ++ + M+ G +EE E M E N W L
Sbjct: 398 ---EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 454
Query: 266 IGG 268
+G
Sbjct: 455 LGA 457
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 310/564 (54%), Gaps = 40/564 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV GL K ++ +I A ++ RK+FD++ ++NVVSW ++ NGY+
Sbjct: 143 QVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVN 202
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V LF +M ++ PN T + +C K+ L G+++ L+ + G ++N V
Sbjct: 203 MAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVN 262
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------------------- 180
AL+++Y + A ++F E ++N+V++ ++++ Y+ G
Sbjct: 263 ALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRP 322
Query: 181 DIVS-----ARC---------------LFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
D V+ A C +F ER + N I+ Y+ A K+F
Sbjct: 323 DKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVF 382
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D M K V++WN++++G +G++E R+F EMPE N+ SWN +IG +F E +D
Sbjct: 383 DSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAID 442
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
+ M +G + + T+V + SAC LGALD +KW++ Y E N ++ +G AL+DM+
Sbjct: 443 LLREMQNQG-IKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMF 501
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
++CG NA+ VF +M+ +D+ W I A+ G GA+ LF EM D F+
Sbjct: 502 SRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFV 561
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L A +H G V++G F +M + + PQI HYGCMVDLL RAG L EA D +K MPI
Sbjct: 562 ALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPI 621
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
+ + VIW + L +CR +KNVE A A E++T+L P+ V+LSNIY G+W DVAR+
Sbjct: 622 KPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARV 681
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVV 544
++ M++ GF+K+ G SSIEV+ ++
Sbjct: 682 RLQMKEKGFQKVAGSSSIEVHGLI 705
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 290/613 (47%), Gaps = 59/613 (9%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMF--D 58
T + L+T K L +++ Q+ + L+K + ++I AC Q+ + + YA F D
Sbjct: 21 TQKPKNSSLQTCKTLIELK-QLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKED 79
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALR 117
+ T ++ + N + GYA + + + ++ M + +P+ FTFP +L +C KI A
Sbjct: 80 EGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFS 139
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
EG ++H +V+K G ++FV +LI Y+ ++ KVF EM ERNVV WTS+INGY
Sbjct: 140 EGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYS 199
Query: 178 SCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVI 229
A CLF E+ E + + +S ++++ +K+ + M K + +
Sbjct: 200 VVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTL 259
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
N +L Y GD+ + +F+E ++N+ +N ++ Y +GL EVL ML +G
Sbjct: 260 VVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKG 319
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ P+ T+++ ++ACA+LG L K H Y NG + + NA+IDMY KCG E A
Sbjct: 320 QR-PDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAA 378
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGR-----------------------GA-------- 378
VF+SM K ++TWN++I+GL G GA
Sbjct: 379 CKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFE 438
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
A+ L EM+N G D +T +GI AC ++G ++ + + I ++ +
Sbjct: 439 EAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA-KWIYTYIEKNDIHIDMQLGTAL 497
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA-ELALERLTELEPKN 497
VD+ +R G A+ + M + D W + V N + A EL E L + +
Sbjct: 498 VDMFSRCGDPLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKAD 556
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKS 557
FV L + G ++ AM +K+ G S ++V GC+ L R
Sbjct: 557 DFVFVALLTAFSHGGYVDQGRQLFWAM-----EKIHGVSP----QIVHYGCMVDLLGRAG 607
Query: 558 IVRAEANMIKLLP 570
++ +++K +P
Sbjct: 608 LLEEAFDLMKSMP 620
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 176/409 (43%), Gaps = 45/409 (11%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + LE K + + T++ G++ + + ++ + M R++FD+ +D+N+V
Sbjct: 234 AKLKDLELGKKVCNLMTEL---GVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLV 290
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+N + + Y Q+ V+V+ +M + P+ T + +C ++ L G+ H V
Sbjct: 291 MYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYV 350
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+NG + A+I++Y EAA KVF M + VV W S+I G + G++ A
Sbjct: 351 FRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELAL 410
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-------------------- 226
+F PE +++ WNT++ + EA L +M +
Sbjct: 411 RIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLG 470
Query: 227 --DVISW-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
D+ W ++ ++ GD R+FE M +R+V +W I
Sbjct: 471 ALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIR 530
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE-YNGY 326
A G ++ F ML + V +D V +L+A + G +D + + E +G
Sbjct: 531 VKAVEGNAKGAIELFDEMLKQD-VKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGV 589
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ ++D+ + G++E A D+ SM K + + W + ++ H
Sbjct: 590 SPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKH 638
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 264/422 (62%), Gaps = 31/422 (7%)
Query: 119 GEELHCLVLKNGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
G LH L++GF A ++FV TAL+E+Y+ A
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAA--------------------------- 98
Query: 178 SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
G+I AR F+ AP RDV L N +++ Y+ + EARK+FD M +D++SWNTM+ G
Sbjct: 99 --GEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHG 156
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA GDV + +F+ +R+ FSW+ +I YA E L+ ++ M G V P+ +
Sbjct: 157 YAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAG-VAPDCIS 215
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+V+VLSAC+ +GAL VH + E N + ++ +G AL+DMYAKCG IEN++ VF++M
Sbjct: 216 MVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMP 275
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
KD++TW+++I GLA HG G ALSLF EM + G P+ ITFIG+L ACTH+GLV +G
Sbjct: 276 VKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKK 335
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
YF SM+ + +VP++EHYGCMVDLL RAG + EA++ ++ M + D +IW LLG+CR++
Sbjct: 336 YFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIH 395
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
KNVE+AE A+ +L L+P ++V+LSNIY W+ VA ++ +R +++PG SS
Sbjct: 396 KNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSS 455
Query: 538 IE 539
IE
Sbjct: 456 IE 457
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 18/230 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD D++ SW++M + YA+ + + L+ +M+ P+C + VL +C
Sbjct: 166 AREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSA 225
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ AL G E+H V N ++ +GTAL+++Y+ IE + KVF M ++V+ W+SM
Sbjct: 226 MGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSM 285
Query: 173 INGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM--- 223
I G + G A LF L P + I ++ + N + +K F M
Sbjct: 286 IIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVN--DGKKYFSSMSDV 343
Query: 224 ----PKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
P+ + + M+ G VEE L M + + W L+G
Sbjct: 344 HGVVPRME--HYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGA 391
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 308/542 (56%), Gaps = 13/542 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNV-- 65
+ +T + L QI ++ SGL +++ ++ K + + FD + TD +V
Sbjct: 13 HRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFG--KHIGFVDYAFDFLNQTDLHVGT 70
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+ +N + YA + + +++ ++ +P+ +TFP+VLK+C K ++EGE++H +
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGV 130
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K GF +++V +L+ YS A +VF EM R+VV WT +I+GY+ G A
Sbjct: 131 AVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEA 190
Query: 186 RCLF---ELAPERDVILWNTIVSGYIDVRNMIEARK--LFDQMPKKDVISWNTMLSGYAN 240
LF ++ P + + G + +M + ++ + ++ N ++ Y
Sbjct: 191 INLFLKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVK 250
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
+ E ++LF+E+P+R++ SW +I G + L+ F M G V P+ + +
Sbjct: 251 CECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISG-VEPDRIILTS 309
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
VLSACA LGALD+ +WV Y E G + ++ +G AL+DMYAKCG IE A+ +FN + ++
Sbjct: 310 VLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRN 369
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF- 419
+ TWN ++ GLAMHG G AL F M AG P+ +TF+ IL AC H GLV EG SYF
Sbjct: 370 IFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFY 429
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
Q ++ ++ P++EHYGCM+DLL RAG L EA F++ MP+ D +IW LL +C+ N
Sbjct: 430 QMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGN 489
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
VEL++ L L EL+ ++ +V+LSNIY RW DV R++ M+D G +K PG S IE
Sbjct: 490 VELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIE 549
Query: 540 VN 541
V+
Sbjct: 550 VD 551
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 300/534 (56%), Gaps = 10/534 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + GLE ++ ++ A+ + A+++F ++ ++VV+WNAM G +
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V L QM++ PN T VL + + AL G+ LH ++ F + VGT
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
L+++Y+ + + A K+F M RN V W++MI GY+ + A LF+ +D
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309
Query: 198 ---ILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRL 250
+ +++ + ++ RKL + K D++ NT+LS YA G +++ R
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ M ++ S++ ++ G NG L F+ M G + P+ T++ VL AC+ L A
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSG-IDPDLTTMLGVLPACSHLAA 428
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L H Y G+ + + NALIDMY+KCG I A +VFN MD D+++WN +I G
Sbjct: 429 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIG 488
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+HG G AL LFH++ G PD ITFI +L +C+H GLV EG +F +M+ D+SIVP
Sbjct: 489 YGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVP 548
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EH CMVD+L RAG + EA F++ MP E D IW+ LL +CR++KN+EL E +++
Sbjct: 549 RMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI 608
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L P++ NFV+LSNIY GRW D A I++ +D G KK+PGCS IE+N +V
Sbjct: 609 QSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 662
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 237/479 (49%), Gaps = 35/479 (7%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
S+ L K +HQ + ++ + R+ +C Q+ AR++FD+I + +V+
Sbjct: 20 QSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC---NQVVLARRLFDEIPNPSVIL 76
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN + YA N + L+ M L PN +T+P VLK+C + A+ +G E+H
Sbjct: 77 WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING---YISCGDIVS 184
G +++FV TAL++ Y+ + A ++F M R+VV W +MI G Y C D V
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAV- 195
Query: 185 ARCLFELAPERDVILWNTIVS-----------GYIDVRNMIEARKLFDQMPKKDVISWNT 233
+ + ++ E +TIV G+ + R+ FD V+
Sbjct: 196 -QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN----GVVVGTG 250
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+L YA + +++F+ M RN SW+ +IGGY + E L+ F +M+ + + P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDP 310
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
T+ +VL ACA+L L + +H Y G ++ +GN L+ MYAKCG+I++A+ F
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFF 370
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM---- 409
+ M+ KD ++++ I+SG +G A ALS+F M+ +G PD T +G+L AC+H+
Sbjct: 371 DXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQ 430
Query: 410 -GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
G G + A D I ++D+ ++ G+++ A + RM D V W
Sbjct: 431 HGFCSHGYLIVRGFATDTLIC------NALIDMYSKCGKISFAREVFNRMD-RHDIVSW 482
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 19/411 (4%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L++C++ +L E +++H LKN A+ V L LY + + A ++F E+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 166 VVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIV---SGYIDVRNMIEAR- 217
V++W +I Y G A + L + + ++ SG + + + +E
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 218 --KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
K+F + DV ++ YA G + E +RLF M R+V +WN +I G + GL
Sbjct: 134 HAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+ + +M EG + PN +TIV VL AL K +H Y + V VG
Sbjct: 192 DDAVQLIMQMQEEG-ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAGEM 393
L+DMYAKC + A +F+ M ++ ++W+ +I G AL LF +M K+A +
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD- 309
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
P +T +L AC + + G + V I ++ + A+ G + +A+
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRG-RKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIR 368
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
F M D+V ++ ++ C N +A L++ R+ +L +P ML
Sbjct: 369 FFDXMN-PKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQLSGIDPDLTTML 417
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 204/554 (36%), Positives = 308/554 (55%), Gaps = 42/554 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ L QI +V +GL + + +I + + + YA K+F++I +V N +
Sbjct: 26 RTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVSICNHVLR 85
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G AQ+ V L+T+M+K P+ +TF VLK+C K+ G +H V+++GF
Sbjct: 86 GSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFLL 145
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
N +V ALI ++ +CGD+ A LF+ +
Sbjct: 146 NEYVKNALILFHA-------------------------------NCGDLGIASELFDDSA 174
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+ + W+++ SGY + EA +LFD+MP KD ++WN M++G +++ + LF+
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDR 234
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
E++V +WN +I GY N G E L FK M G P+ TI+++LSACA LG L+
Sbjct: 235 FTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGE-HPDVVTILSLLSACAVLGDLET 293
Query: 314 SKWVHVYA-EYNGYQGNVCVG----NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
K +H+Y E ++ VG NALIDMYAKCG I+ A++VF M +DL TWNT+I
Sbjct: 294 GKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLI 353
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
GLA+H G++ +F EM+ P+ +TFIG++ AC+H G V+EG YF M Y+I
Sbjct: 354 VGLALH-HAEGSVEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI 412
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P I+HYGCMVD+L RAG L EA FV+ M IE +A++W LLG+C++Y NVEL + A E
Sbjct: 413 EPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE 472
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE--VVML 546
+L + ++V+LSNIY G+W V +++ DT KK G S IE ++ ++M
Sbjct: 473 KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLIEEDDDKLMMR 532
Query: 547 GCLSRELDRKSIVR 560
LS E + KS R
Sbjct: 533 YLLSSEAESKSRKR 546
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 168/382 (43%), Gaps = 60/382 (15%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+LE + I +VV G ++Y+ +I A + A ++FD + V+W++
Sbjct: 124 KLEWRSNGFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSS 183
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M +GYA+ + LF +M D + + +++ C+K
Sbjct: 184 MTSGYAKRGKIDEAMRLFDEMPDKDQV----AWNVMITGCLKC----------------- 222
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
+ +++A ++F E++VV W +MI+GY++CG A +F
Sbjct: 223 ------------------REMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFK 264
Query: 190 ---ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS---------WNTMLSG 237
+ DV+ +++S + ++ ++L + + +S WN ++
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL--FFEVLDAFKRMLTEGRVFPND 295
YA G ++ +F M +R++ +WN LI G A + E+ + +R+ +V+PN+
Sbjct: 325 YAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALHHAEGSVEMFEEMQRL----KVWPNE 380
Query: 296 ATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T + V+ AC+ G +D K+ + + + N+ ++DM + G++E A
Sbjct: 381 VTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVE 440
Query: 355 SMDTK-DLITWNTIISGLAMHG 375
SM + + I W T++ ++G
Sbjct: 441 SMKIEPNAIVWRTLLGACKIYG 462
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 293/515 (56%), Gaps = 21/515 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ + +M A ++FD + ++NVVSWNAM G+ QN + F +M + D+
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSA-- 225
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL--YSTGKAIEAAYKV 157
+ ++ ++ L E + + + V I L Y ++ A ++
Sbjct: 226 --SLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQL 283
Query: 158 F--------GEMD----ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
F G+ D ERNVV W SMI Y+ DI SAR LF+ ERD I WNT++S
Sbjct: 284 FDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMIS 343
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
GY+ + +M EA LF +MP D ++WN+M+SG+A G++E + LF +P++N+ SWN +
Sbjct: 344 GYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSM 403
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GY NNG + + +++ML +G P+ T+ +VLS C+ AL +H
Sbjct: 404 IAGYENNGDYKGATELYRQMLLQGEK-PDRHTLSSVLSVCSGFAALHLGMQIHQQITKTV 462
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLF 384
++ + N+LI MY++CG I A +F+ + K++I+WN +I G A HG A AL LF
Sbjct: 463 IP-DIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELF 521
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
MK P ITFI +L AC H G V+EG +F+SMA ++ I P+IEH+ +VD++ R
Sbjct: 522 ELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGR 581
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
G+L EA+D + MP E D +W LLG+CRV+ NVELA +A E L +LEP++ A +V+L
Sbjct: 582 HGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLL 641
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
N+Y D+G+W + +++ M +K PG S ++
Sbjct: 642 HNMYADVGQWDNATEMRMMMERNNIRKQPGYSWVD 676
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 201/443 (45%), Gaps = 74/443 (16%)
Query: 121 ELHCLV-----LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
LHC V KN +++ I I A +F M +RN+V W SMI G
Sbjct: 48 HLHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITG 107
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDV--RNMIEARKLFDQMPKKDVISWNT 233
Y+ ++ AR LF+ P+RDV+ WN ++SGY+ R + E R LFD+MP++D +SWNT
Sbjct: 108 YVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNT 167
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
M+SGY +G ++E +LF+ M ERNV SWN ++ G+ NG ++ F RM
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPER----- 222
Query: 294 NDATIVTVLSACARLGALDFSK---------------WVHVY------------------ 320
+ A++ +++ + G LD +K VH Y
Sbjct: 223 DSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQ 282
Query: 321 -----AEYNG-------YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
Y+G ++ NV N++I Y K I +A +F+ M +D I+WNT+I
Sbjct: 283 LFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMI 342
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SG A LF EM N PD +T+ ++ G +E + F +
Sbjct: 343 SGYVRMSDMEEAWMLFQEMPN----PDTLTWNSMISGFAQKGNLELARALF-------AT 391
Query: 429 VPQ--IEHYGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVELA 483
+PQ + + M+ G A + ++M ++ D +++L C + + L
Sbjct: 392 IPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLG 451
Query: 484 ELALERLTE-LEPKNPANFVMLS 505
+++T+ + P P N +++
Sbjct: 452 MQIHQQITKTVIPDIPINNSLIT 474
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 301/534 (56%), Gaps = 35/534 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q T K L ++ + L + + + ITAC K + A ++ + NV +N
Sbjct: 36 KQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYN 95
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+F G+ + L+ +M + P+ +T+ ++K+ A R GE L + K
Sbjct: 96 ALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKF 153
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++ + T LI+ YS + G I AR +F
Sbjct: 154 GFGFHVKIQTTLIDFYS-------------------------------ATGGIREARKVF 182
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PERD I W T+VS Y V +M A L +QM +K+ + N +++GY G++E+ +
Sbjct: 183 DEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAES 242
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MP +++ SW +I GY+ N + E + F +M+ EG + P++ T+ TV+SACA LG
Sbjct: 243 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG-IIPDEVTMSTVISACAHLG 301
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ K VH+Y NG+ +V +G+AL+DMY+KCG +E A+ VF ++ K+L WN+II
Sbjct: 302 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 361
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA HG AL +F +M+ P+ +TF+ + ACTH GLV+EG ++SM DYSIV
Sbjct: 362 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 421
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+EHYG MV L ++AG + EA++ + M E +AVIW LL CR++KN+ +AE+A +
Sbjct: 422 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 481
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL-PGCSSIEVNE 542
L LEP N + +L ++Y + RW+DVA I+ MR+ G +K+ PG SSI +++
Sbjct: 482 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDK 535
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/491 (39%), Positives = 278/491 (56%), Gaps = 44/491 (8%)
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST---GKAIEA 153
M + F P +L ++ E + H +LK+G + F + LI ST +AI
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPY 60
Query: 154 AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPER------------ 195
A+ +F + N +W ++I Y + +A +F + P++
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 196 ---------------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
D+ + NT++ Y + +AR L D+M ++DV+SWN +
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 235 LSGYANNGDVE-ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
LS YA G +E +R+F E P +NV SWN +I GY++ G F EVL F+ M G V P
Sbjct: 181 LSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAG-VKP 239
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
++ T+V+VLSACA +GAL +WVH Y + NG + V AL+DMY+KCG IE A++VF
Sbjct: 240 DNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVF 299
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
NS KD+ TWN+IISGL+ HG G AL +F EM G P+ +TF+ +L AC+ GL++
Sbjct: 300 NSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLD 359
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EG F M + I P IEHYGCMVDLL R G L EA + V++MP + +V+W +LLG+
Sbjct: 360 EGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGA 419
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
CR + NVELAE ++L EL P+ ++FV LSN+Y +GRWKDV ++ MR G +K P
Sbjct: 420 CRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDP 479
Query: 534 GCSSIEVNEVV 544
GCS IEV+ V
Sbjct: 480 GCSMIEVDGTV 490
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 190/416 (45%), Gaps = 54/416 (12%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNV 65
+E + LHQ ++ SGL S + R+I + + + + YA +F +I + N
Sbjct: 14 AEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNS 73
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN + YA + + +F QM +P+ +TF LKSC + + EG ++H
Sbjct: 74 YMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGH 133
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI-VS 184
VLK G ++F+ LI LY++ IE A + M ER+VV W ++++ Y G + ++
Sbjct: 134 VLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELA 193
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSG--- 237
+R +F P ++V+ WN +++GY E LF+ M K D + ++LS
Sbjct: 194 SRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAH 253
Query: 238 --------------------------------YANNGDVEECKRLFEEMPERNVFSWNGL 265
Y+ G +E+ +F +++ +WN +
Sbjct: 254 VGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSI 313
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVY 320
I G + +G L F ML EG PN+ T V VLSAC+R G LD F+ VHV+
Sbjct: 314 ISGLSTHGSGQHALQIFSEMLVEG-FKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVH 372
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL-ITWNTIISGLAMHG 375
G Q + ++D+ + G++E A ++ M K+ + W +++ HG
Sbjct: 373 ----GIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHG 424
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
I A +F+ + + WNTII A AL++FH+M +A +PD TF L +
Sbjct: 58 IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKS 117
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C VEEG + + + ++ L A G + +A + RM +E D V
Sbjct: 118 CGSFSGVEEG-RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVV 175
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEP-KNPANFVMLSNIYGDLGRWKDVARIKVAM 524
W LL + Y L ELA R+ P KN ++ + Y GR+ +V + M
Sbjct: 176 SWNALLSA---YAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDM 232
Query: 525 RDTGFKKLPGCSSIEV-NEVVMLGCLSR 551
+ G K C+ + V + +G LS+
Sbjct: 233 QHAGVKP-DNCTLVSVLSACAHVGALSQ 259
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + +G+ ++ ++ ++ + A ++F+ +++ +WN++ +G + +
Sbjct: 263 VHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGS 322
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVGT 139
+ + +F++M PN TF VL +C + L EG E+ L++ +G + I
Sbjct: 323 GQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYG 382
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNV-VVWTSMINGYISCGDI----VSARCLFELAPE 194
+++L +E A ++ +M ++ VVW S++ + G++ A+ L EL+P+
Sbjct: 383 CMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQ 442
Query: 195 RDVILWNTIVSGYIDVRNM 213
S ++ + NM
Sbjct: 443 ES--------SSFVQLSNM 453
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 289/505 (57%), Gaps = 37/505 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL-REGEELHCLVL 127
N + A + R F+ + + P+ FTFP +LKS ++ + R G ++H +
Sbjct: 47 NLLIRASATSPSPRLAFAAFSSILRSGDTPDRFTFPSLLKSASRLASFPRTGAQVHAQAV 106
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGE-MDERNVVVWTSMINGYISCGDIVSAR 186
+ G ++FV L+ +Y+ + + +VF ++V W +M+ GY+ CG+I AR
Sbjct: 107 RRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKCGEIGEAR 166
Query: 187 CLFELAPERDVILWNTIVSGY-----IDV------------RNMIE-------------- 215
+FE P+R+ + W+ +V Y +DV RN++
Sbjct: 167 RVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDEMPAIGRNVVSWNSMITGFARHGLL 226
Query: 216 --ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
ARK+FD+MP ++++SWNTM+ GYA NG++ + + LF+ MPE++V SW +I GYA
Sbjct: 227 PLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQAR 286
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG--YQGNVC 331
+ E L+ F+ M +E V PN+ T+V+VLSACA L AL+ +W H + + +
Sbjct: 287 CYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFN 346
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+G ALIDMY+KCG + AV +F+S+D K++ WN +I+GLA++G ++ +F +M+ +G
Sbjct: 347 LGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWNALITGLAVNGDVRSSIDVFEQMRRSG 406
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
E P+GITF+G+L AC H GLV+EG FQSMA + P+ +HYGCMVD+L RAG L EA
Sbjct: 407 EKPNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKHYGCMVDMLGRAGLLEEA 466
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+ ++ MP+ D +I LLG+CR++K V++A + L + V++S+IY
Sbjct: 467 EELIRSMPMVPDVMILGALLGACRMHKRVDVAARVQNEILGLSTQQSGCHVLISDIYAAA 526
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCS 536
G+W D + ++ G KL G S
Sbjct: 527 GKWADALYARGVLQKFGISKLRGSS 551
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 52/402 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQN 78
Q+ Q V GL ++ ++ A + R++FD ++V+WN M GY +
Sbjct: 100 QVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKC 159
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+F QM + N ++ ++ + L E+ + G N+
Sbjct: 160 GEIGEARRVFEQMPQR----NGVSWSAMVGAYAGAGELDVAREMFDEMPAIG--RNVVSW 213
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
++I ++ + A K+F EM RN+V W +M+ GY G++ AR LF+ PE+DV+
Sbjct: 214 NSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVV 273
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN--TMLS-------------------- 236
W ++SGY R E +LF M + + N TM+S
Sbjct: 274 SWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAF 333
Query: 237 --------------------GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
Y+ G + ++F + ++NV +WN LI G A NG
Sbjct: 334 IDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWNALITGLAVNGDVR 393
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNA 335
+D F++M G PN T V VL+ACA G +D + A G Q
Sbjct: 394 SSIDVFEQMRRSGEK-PNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKHYGC 452
Query: 336 LIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGR 376
++DM + G++E A ++ SM D++ ++ MH R
Sbjct: 453 MVDMLGRAGLLEEAEELIRSMPMVPDVMILGALLGACRMHKR 494
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 122/302 (40%), Gaps = 22/302 (7%)
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F P F N LI A + AF +L G P+ T ++L + +RL +
Sbjct: 35 FPLFPSSCTFLHNLLIRASATSPSPRLAFAAFSSILRSGDT-PDRFTFPSLLKSASRLAS 93
Query: 311 LDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS-MDTKDLITWNTII 368
+ VH A G +V V N L+ MYA + +VF+S DL+TWNT++
Sbjct: 94 FPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTML 153
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G G A +F +M +G+++ ++ A G ++ F M +I
Sbjct: 154 GGYVKCGEIGEARRVFEQMPQR----NGVSWSAMVGAYAGAGELDVAREMFDEMP---AI 206
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
+ + M+ AR G L A MP+ + V W ++ V + A +
Sbjct: 207 GRNVVSWNSMITGFARHGLLPLARKMFDEMPVR-NLVSWNTMVRGYAVNGEMNDARELFD 265
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGC 548
R+ E K+ ++ + + Y + + + F+ + S++ NEV M+
Sbjct: 266 RMPE---KDVVSWTCMISGYAQARCYTETLEL--------FRAMQSESNVLPNEVTMVSV 314
Query: 549 LS 550
LS
Sbjct: 315 LS 316
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 302/538 (56%), Gaps = 21/538 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I ++ SG++ + ++ ++ + + A+ +F+ ++V+SWN+M G+AQ+
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ T LF +M+ + P+ TF VL C AL G+++H + ++G + ++ +G A
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNA 572
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVIL 199
LI +Y +++ A VF + R+V+ WT+MI G G+ + A LF ++ E
Sbjct: 573 LINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEG---- 628
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISW-------------NTMLSGYANNGDVEE 246
+ + S + + + + D+ K VI++ N ++S Y+ +G + +
Sbjct: 629 FRPVKSTFSSILKVCTSSACLDE--GKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ +F++MP R++ SWN +I GYA NGL ++ F + E V PN + V++L+AC+
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVE-FAYQMQEQDVVPNKFSFVSLLNACS 745
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
AL+ K VH QG+V VG ALI MYAKCG A +VF+++ K+++TWN
Sbjct: 746 SFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNA 805
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+ A HG + AL F+ M+ G PDG TF IL AC H GLV EG F SM +Y
Sbjct: 806 MINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEY 865
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
++P IEHYGC+V LL RA R EA + +MP DA +W LLG+CR++ N+ LAE A
Sbjct: 866 GVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHA 925
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L +NPA +++LSN+Y GRW DVA+I+ M G +K PG S IEV+ ++
Sbjct: 926 ANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNII 983
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 233/475 (49%), Gaps = 20/475 (4%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+LE K +H +Q++ +G ++ + +++ + + AR++F I+ ++VVS+N
Sbjct: 143 ELENGKKIH---SQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M YAQ + + + LF QM P+ T+ +L + + L EG+ +H L ++ G
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++I VGTAL+ + +++A + F +R+VVV+ ++I G V A +
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYY 319
Query: 191 LAPERDVILWNTIVSGYIDVRNM------IEARKLF-----DQMPKKDVISWNTMLSGYA 239
V L T Y+ + N +EA KL + DV N ++S YA
Sbjct: 320 RMRSDGVALNRTT---YLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
GD+ + + LF MP+R++ SWN +I GYA E + +K+M +EG V P T +
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG-VKPGRVTFL 435
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+LSACA A K +H +G + N + NAL++MY +CG + A +VF +
Sbjct: 436 HLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+I+WN++I+G A HG A LF EM+N PD ITF +L C + +E G
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG-KQI 554
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ + + ++++ R G L +A + + D + W ++G C
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGC 608
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 243/488 (49%), Gaps = 13/488 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q+V + + +++ +I + + + A ++F ++ ++V+SWN++ + YAQ
Sbjct: 48 RIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQG 107
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + LF +M+ +PN T+ +L +C L G+++H ++K G++ + V
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE---R 195
+L+ +Y + A +VF + R+VV + +M+ Y + LF +++ E
Sbjct: 168 SLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227
Query: 196 DVILWNTIVSGYIDVRNMIEARKLF----DQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
D + + ++ + + E +++ ++ D+ +++ GDV+ K+ F
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ +R+V +N LI A +G E + + RM ++G V N T +++L+AC+ AL
Sbjct: 288 KGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG-VALNRTTYLSILNACSTSKAL 346
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H + +G+ +V +GNALI MYA+CG + A ++F +M +DLI+WN II+G
Sbjct: 347 EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGY 406
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A A+ L+ +M++ G P +TF+ +L AC + +G + + + I
Sbjct: 407 ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-LRSGIKSN 465
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++++ R G L EA + + D + W +++ + + E A + +
Sbjct: 466 GHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQ 524
Query: 492 --ELEPKN 497
ELEP N
Sbjct: 525 NEELEPDN 532
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 199/414 (48%), Gaps = 27/414 (6%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ +L++C + L E + +H +++ +IF+ LI +Y +++ A++VF EM
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIE 215
R+V+ W S+I+ Y G A LFE P + I + +I++ +
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNK--ITYISILTACYSPAELEN 146
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+K+ Q+ K +D N++LS Y GD+ +++F + R+V S+N ++G YA
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
E L F +M +EG + P+ T + +L A LD K +H G ++
Sbjct: 207 KAYVKECLGLFGQMSSEG-ISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG AL+ M +CG +++A F +D++ +N +I+ LA HG A ++ M++ G
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD-YSIVPQIEHYGCMVDLLARAGRLAE 450
+ T++ IL AC+ +E G ++ D +S QI + ++ + AR G L +
Sbjct: 326 VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN--ALISMYARCGDLPK 383
Query: 451 AVDFVKRMPIEADAVIWANLLG----------SCRVYKNVELAELALERLTELE 494
A + MP + D + W ++ + R+YK ++ + R+T L
Sbjct: 384 ARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
AT V +L C R L +K +H ++ + N LI+MY KC + +A VF
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
M +D+I+WN++IS A G A LF EM+NAG +P+ IT+I IL AC +E G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 416 LS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD-FVKRMPIEADAVIWANLLG 472
+ Q + Y P++++ ++ + + G L A F P D V + +LG
Sbjct: 148 KKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISP--RDVVSYNTMLG 202
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/452 (40%), Positives = 274/452 (60%), Gaps = 41/452 (9%)
Query: 97 MPNCFTFPIVLKSCVKINA----LRE----GEELHCLVLKNGFRA-NIFVGTALIELYST 147
+ N F+ + +++ ++A +R+ LH LK+GF A ++FV TAL+E Y+
Sbjct: 28 LDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALVEAYAK 87
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY 207
G AR F+ AP RDV L N +++ Y
Sbjct: 88 A-------------------------------GRADLARAAFDEAPRRDVFLCNVMLAAY 116
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + EAR++FD M ++D++SWNTM+ GYA NG+V+ + +F M +R+ FSW+ ++
Sbjct: 117 VTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMS 176
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
Y + L+ ++ M V P+ T+V+VLSAC+ +GAL VH + E NG +
Sbjct: 177 AYTKGRRSKDALELWREMRAAC-VNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVE 235
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+V +G ALIDMYAKCG IEN+V VF+SM KD++TW+++I GLA HG G ALSLF M
Sbjct: 236 LDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRM 295
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ G P+ +TFIG+L +CTH+GLV +G YF SM++ + + P+++HYGCMVDLL R+G
Sbjct: 296 LSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGH 355
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ EA ++ MP E DAVIW LLG+CR+YKNVE+AE A+ +L L+P ++V+LSNI
Sbjct: 356 IEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNI 415
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
Y W+ VA ++ +R +++PG SSIE
Sbjct: 416 YAQANSWEGVAEMRRTLRRERIQRIPGRSSIE 447
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 17/261 (6%)
Query: 22 QTQVVTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + V G+ + D ++ +I A ++ AR++F+ + D++ SW++M + Y +
Sbjct: 124 EARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRR 183
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + L+ +M+ P+C T VL +C + AL G E+H V NG ++ +GTA
Sbjct: 184 SKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTA 243
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---DIVS--ARCLFELAPER 195
LI++Y+ IE + +VF M ++V+ W+SMI G + G D +S +R L E
Sbjct: 244 LIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPN 303
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECK 248
+V ++S + + + +K F M PK V + M+ +G +EE K
Sbjct: 304 EVTFIGVLIS-CTHLGLVSDGKKYFSSMSVVHGVTPK--VQHYGCMVDLLGRSGHIEEAK 360
Query: 249 RLFEEMP-ERNVFSWNGLIGG 268
+L +MP E + W L+G
Sbjct: 361 QLIRDMPFEPDAVIWRALLGA 381
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 116/256 (45%), Gaps = 19/256 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V ++G+E + +I A+ + + ++F + ++V++W++M G A +
Sbjct: 224 EVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHG 283
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
F + LF++M PN TF VL SC + + +G++ + + +G +
Sbjct: 284 FGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHY 343
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI-------NGYISCGDIVSARCLFE 190
+++L IE A ++ +M E + V+W +++ N ++ + R L
Sbjct: 344 GCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDP 403
Query: 191 LAPERDVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISW-NTM---LSGYANN 241
A V+L N G ++R + R+ ++P + I W NT+ +SG ++
Sbjct: 404 HADGHYVLLSNIYAQANSWEGVAEMRRTLR-RERIQRIPGRSSIEWQNTIHEFISGDRSH 462
Query: 242 GDVEECKRLFEEMPER 257
+E ++ EM +R
Sbjct: 463 PRSKEIYKMLGEMMDR 478
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 279/526 (53%), Gaps = 65/526 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVSWNAMFNGY 75
L QI Q++ +GL + +++ CA + YAR +FD+I N WN M GY
Sbjct: 34 LRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGY 93
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ ++ ++L+ M N +TFP +LK+C ++AL E +++H ++K GF +
Sbjct: 94 SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGS-- 151
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
E+Y+T S++N Y GDI SAR L
Sbjct: 152 -------EIYTT----------------------NSLLNVYSKSGDIKSARLL------- 175
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
FDQ+ ++D +SWN+M+ GY G++E +F MP
Sbjct: 176 ------------------------FDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMP 211
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERN+ SW +I G G E L+ F RM T G N A +V+ L ACA LG LD K
Sbjct: 212 ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVA-LVSTLQACADLGVLDQGK 270
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
W+H Y + + + + +G LIDMYAKCG +E A++VF M+ K + W +ISG A+HG
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
RG AL F +M+ AG P+ +TF GIL AC+H GLV E F+SM + P IEHY
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY 390
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GCMVDLL RAG L EA + ++ MP++ +A IW LL +C ++ N+EL + + L +++P
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDP 450
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ ++ L++I+ G W AR++ M++ G KLPGCS I VN
Sbjct: 451 GHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVN 496
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 293/507 (57%), Gaps = 20/507 (3%)
Query: 47 LKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIV 106
++++ ARK+FD++ D++V+SWN+M +GY N + LF QM L + T V
Sbjct: 198 IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
+ C L G LH +K F + + L+++YS + +A +VF M ER+V
Sbjct: 258 VAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 317
Query: 167 VVWTSMINGYISCG-DIVSARCLFELAPE---RDVILWNTIV-----SGYI----DVRNM 213
V WTSMI GY G +S R E+ E D+ TI+ +G + DV N
Sbjct: 318 VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY 377
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
I+ K+ + D+ N ++ YA G + + +F EM +++ SWN +IGGY+ N
Sbjct: 378 IKENKM-----QSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNS 432
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L E L+ F M + PN T+ +L ACA L AL+ + +H + NG+ + V
Sbjct: 433 LPNEALNLFVEMQYNSK--PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
NAL+DMY KCG + A +F+ + KDL++W +I+G MHG G+ A++ F+EM+N+G
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ++FI IL AC+H GL++EG +F M + I P+ EHY C+VDLLARAG L++A
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
F+K MPIE DA IW LL CR+Y +V+LAE E + ELEP+N +V+L+NIY + +
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEV 540
W++V +++ + G +K PGCS IE+
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCSWIEI 697
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 226/495 (45%), Gaps = 71/495 (14%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFD-KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
K+ ++ + +CA + + D KITD N+ + + R + L Q
Sbjct: 39 KTPLVSSNLYHSCATIGTSVLPSETIDCKITDYNI-----EICRFCELGNLRRAMELINQ 93
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
K D T+ VL+ C + ++++G +H ++ N + +G+ L+ +Y T
Sbjct: 94 SPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGD 151
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGD------------------IVSARCLFELA 192
+ ++F ++ V +W ++NGY G+ + SAR LF+
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDEL 211
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMP---------------------------- 224
+RDVI WN+++SGY+ + LF+QM
Sbjct: 212 GDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGR 271
Query: 225 -----------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
K++ N +L Y+ +G++ ++FE M ER+V SW +I GYA G
Sbjct: 272 ALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREG 331
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L + F M EG + P+ TI T+L ACA G L+ K VH Y + N Q ++ V
Sbjct: 332 LSDMSVRLFHEMEKEG-ISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVS 390
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
NAL+DMYAKCG + +A VF+ M KD+++WNT+I G + + AL+LF EM+ +
Sbjct: 391 NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK- 449
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMD-YSIVPQIEHYGCMVDLLARAGRLAEAV 452
P+ IT IL AC + +E G + + +S+ + + +VD+ + G L A
Sbjct: 450 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLAR 507
Query: 453 DFVKRMPIEADAVIW 467
+P E D V W
Sbjct: 508 LLFDMIP-EKDLVSW 521
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 12 LETTKHLHQ-IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
LE K +H I+ + S L +++ ++ A+ M A +F ++ +++VSWN
Sbjct: 368 LENGKDVHNYIKENKMQSDL----FVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNT 423
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M GY++N + LF +M + ++ PN T +L +C + AL G+E+H +L+NG
Sbjct: 424 MIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNG 482
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
F + V AL+++Y A+ A +F + E+++V WT MI GY
Sbjct: 483 FSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY 528
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+I ++ +G ++ ++ + + AR +FD I ++++VSW M GY +
Sbjct: 472 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 531
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + F +M+ P+ +F +L +C L EG N R N +
Sbjct: 532 GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-----NMMRNNCCIE 586
Query: 139 ------TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARC 187
+++L + + AYK M E + +W +++ G D+ A
Sbjct: 587 PKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEH 646
Query: 188 LFELAPERD---VILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
+FEL PE V+L N Y + E +KL +++ ++
Sbjct: 647 VFELEPENTGYYVLLANI----YAEAEKWEEVKKLRERIGRR 684
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 303/535 (56%), Gaps = 9/535 (1%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL QI ++ L ++ ++ +Q Y+ +F N+ +N++ N
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G+ N + LF ++K + FTFP+VLK+C + ++ + G +LH LV+K GF
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---- 189
++ T+L+ +YS + A+K+F E+ +R+VV WT++ +GY + G A LF
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEAR---KLFDQMP-KKDVISWNTMLSGYANNGDVE 245
E+ + D ++S + V ++ K ++M +K+ T+++ YA G +E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ + +F+ M E+++ +W+ +I GYA+N E ++ F +ML E + P+ +IV LS+C
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIVGFLSSC 323
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LGALD +W + + + N+ + NALIDMYAKCG + +VF M KD++ N
Sbjct: 324 ASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
ISGLA +G + ++F + + G PDG TF+G+LC C H GL+++GL +F +++
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y++ +EHYGCMVDL RAG L +A + MP+ +A++W LL CR+ K+ +LAE
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L+ L LEP N N+V LSNIY GRW + A ++ M G KK+PG S IE+
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIEL 558
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 297/537 (55%), Gaps = 36/537 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S+ L K +HQ + ++ + R+ +C Q+ AR++FD+I + +V+ W
Sbjct: 21 SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC---NQVVLARRLFDEIPNPSVILW 77
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + YA N + L+ M L PN +T+P VLK+C + A+ +G E+H
Sbjct: 78 NQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH----- 132
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ K+FG E +V V T++++ Y CG +V A+ L
Sbjct: 133 ------------------------SHAKMFGL--ESDVFVCTALVDFYAKCGILVEAQRL 166
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD-VEEC 247
F RDV+ WN +++G +A +L QM ++ + ++ + G +
Sbjct: 167 FSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYA 226
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+++F+ M RN SW+ +IGGY + E LD F+ M G + P+ T++ VL AC+
Sbjct: 227 RKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSG-IDPDLTTMLGVLPACSH 285
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L AL H Y G+ + + NALIDMY+KCG I A +VFN MD D+++WN +
Sbjct: 286 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 345
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I G +HG G AL LFH++ G PD ITFI +L +C+H GLV EG +F +M+ D+S
Sbjct: 346 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 405
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
IVP++EH CMVD+L RAG + EA F++ MP E D IW+ LL +CR++KN+EL E
Sbjct: 406 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVS 465
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++ L P++ NFV+LSNIY GRW D A I++ +D G KK+PGCS IE+N +V
Sbjct: 466 KKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIV 522
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 288/486 (59%), Gaps = 17/486 (3%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL-DAMP--NCFTFPIVLKSCVKINALREG 119
++ VSWN++ GY +N F + K+L MP N ++ ++ C++ + E
Sbjct: 4 RDTVSWNSIITGYWKN-------GCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEA 56
Query: 120 -EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
+ + +N N + + L+ +E A ++F EM RNV+ +T+M++GY
Sbjct: 57 WQYFQAMPQRNTASWNAMI-SGLVRY----DRVEEASRLFEEMPRRNVISYTAMVDGYAK 111
Query: 179 CGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
G+I AR LF P+++V+ W ++SGY++ EA LF+QMP K++++ M++GY
Sbjct: 112 IGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGY 171
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
G ++ K LF+++P R++ SWN +I GYA NG E L +ML G + P+ +T+
Sbjct: 172 CKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMG-MQPDHSTL 230
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
++VL+AC+ L +L + HV +GY+ + + NALI MY KCG I ++ F +D
Sbjct: 231 ISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDH 290
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D+++WN +I+ A HG AL+ F EM++ PDGITF+ +L AC H G V E L++
Sbjct: 291 PDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNW 350
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F SM Y IVP+ EH+ C+VD+L+R G++ +A ++ MP EAD IW LL +C V+
Sbjct: 351 FNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHL 410
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
NV+L ELA +++ ELEP+N +V+LSNIY G W +V R++ MR+ G KK P S +
Sbjct: 411 NVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWM 470
Query: 539 EVNEVV 544
E++ V
Sbjct: 471 EIDNKV 476
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 9/255 (3%)
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M R+ V W S+I GY G ++ LF L P ++V+ WN++++G I+ + EA + F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
MP+++ SWN M+SG VEE RLFEEMP RNV S+ ++ GYA G +
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F M + N + ++S G D ++ +++ + N+ A+I Y
Sbjct: 121 LFNCMPQK-----NVVSWTVMISGYVENGKFDEAE--NLFEQMPD--KNIVAMTAMITGY 171
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
K G + A +F+ + +DL +WN +I+G A +G G AL L +M G PD T I
Sbjct: 172 CKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLI 231
Query: 401 GILCACTHMGLVEEG 415
+L AC+ + ++EG
Sbjct: 232 SVLTACSSLASLQEG 246
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT + + A+ +FD+I +++ SWNAM GYAQN + L +QM K+ P+
Sbjct: 167 MITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 226
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C + +L+EG + H LVLK+G+ + I + ALI +Y +I + F
Sbjct: 227 HSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFR 286
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPER---DVILWNTIVSGYIDVRNMIE 215
++D +VV W +MI + G A F E+ R D I + +++S + E
Sbjct: 287 QIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHE 346
Query: 216 ARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
+ F+ M P+ + + ++ + G VE+ ++ +EMP E + W L+
Sbjct: 347 SLNWFNSMIESYKIVPRPEHFA--CLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLA 404
Query: 268 G 268
Sbjct: 405 A 405
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 142/351 (40%), Gaps = 62/351 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A++ ++ AR +F+ + +NVVSW M +GY +N LF Q MP+
Sbjct: 105 MVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQ------MPD 158
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
NI TA+I Y + A +F
Sbjct: 159 ---------------------------------KNIVAMTAMITGYCKEGKTDKAKILFD 185
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNM 213
++ R++ W +MI GY G A L + P+ ++ ++++ + ++
Sbjct: 186 QIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLI--SVLTACSSLASL 243
Query: 214 IEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
E RK + K S N +++ Y G + + + F ++ +V SWN +I +
Sbjct: 244 QEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAF 303
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYN 324
A +G + L +F M + RV P+ T +++LSAC G + F+ + Y
Sbjct: 304 ARHGFYDRALASFGEMRS-NRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVP 362
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
+ C L+D+ ++ G +E A + M D W +++ +H
Sbjct: 363 RPEHFAC----LVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVH 409
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
V+ SG E I +IT + + + F +I +VVSWNAM +A++ F+
Sbjct: 253 VLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRA 312
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF---RANIFVGTAL 141
+ F +M+ P+ TF +L +C + E ++++ R F L
Sbjct: 313 LASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFA--CL 370
Query: 142 IELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGDIVSARCLFELAPE 194
+++ S G +E AYK+ EM E + +W +++ + G++ +A+ + EL P+
Sbjct: 371 VDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGEL-AAKKIVELEPQ 428
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 288/505 (57%), Gaps = 21/505 (4%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
M A ++FD + ++NVVSWNAM G+ QN + F +M + D+ + ++
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSA----SLSALVAG 56
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIEL--YSTGKAIEAAYKVF--------G 159
++ L E + + + V I L Y ++ A ++F G
Sbjct: 57 LIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGG 116
Query: 160 EMD----ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
+ D ERNVV W SMI Y+ DI SAR LF+ ERD I WNT++SGY+ + +M E
Sbjct: 117 QKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEE 176
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
A LF +MP D ++WN+M+SG+A G++E + LF +P++N+ SWN +I GY NNG +
Sbjct: 177 AWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDY 236
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+ +++ML +G P+ T+ +VLS C+ AL +H ++ + N+
Sbjct: 237 KGATELYRQMLLQGEK-PDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP-DIPINNS 294
Query: 336 LIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
LI MY++CG I A +F+ + K++I+WN +I G A HG A AL LF MK P
Sbjct: 295 LITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRP 354
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
ITFI +L AC H G V+EG +F+SMA ++ I P+IEH+ +VD++ R G+L EA+D
Sbjct: 355 TYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDL 414
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
+ MP E D +W LLG+CRV+ NVELA +A E L +LEP++ A +V+L N+Y D+G+W
Sbjct: 415 INSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQW 474
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIE 539
+ +++ M +K PG S ++
Sbjct: 475 DNATEMRMMMERNNIRKQPGYSWVD 499
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 315/567 (55%), Gaps = 44/567 (7%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
L QIQ ++ L +TP I + YAR++FD+I + + Y+
Sbjct: 17 QLKQIQALIIIKYLS----LTPLFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYS 72
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + + F M + + CFT P + KSC + A+ G+++H LV++ GF +++F
Sbjct: 73 RLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVF 132
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
ALI Y+ + +A +F + ++ + + +I+ Y G++++AR LF+ +R
Sbjct: 133 CQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRS 192
Query: 197 VILWNTIVSGYID----VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL-- 250
++ WN ++S Y + I +++ D+M + + I+ T+LS A GD+E R+
Sbjct: 193 IVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKK 252
Query: 251 ---------------------------------FEEMPERNVFSWNGLIGGYANNGLFFE 277
F+ M R+V +W+ +I GYA NG E
Sbjct: 253 LNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNE 312
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
L+ F+ M ++ PND T+V+VLSACA+LG+++ + + Y E G NV V +AL+
Sbjct: 313 ALELFENM-KSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALL 371
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
MY+KCG I A +F+ + +D +TWN++I GLA++G A++L++ MK P+ I
Sbjct: 372 GMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNI 431
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
TF+G++ ACTH G VE GL +F+SM D++I P IEH+ C+VDL R+GRL +A +F+ R
Sbjct: 432 TFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICR 491
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
M +E + VIW LL + R++ NVELAELA ++L ELEP N N+V+LSNIY GRW++
Sbjct: 492 MEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEA 551
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++ M+D +K S +EV + V
Sbjct: 552 LKVRKLMKDKRVQKAAAYSWVEVEDRV 578
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 18/235 (7%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + +I + V + GL + Y+ ++ ++ + AR++FDK+ ++ V+WN+
Sbjct: 341 QLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNS 400
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKN 129
M G A N F + L+ +MK+++ PN TF ++ +C + G E + +
Sbjct: 401 MIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDH 460
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VS 184
NI +++L+ + AY+ M+ E NVV+W ++++ ++ ++
Sbjct: 461 NISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELA 520
Query: 185 ARCLFELAPERD---VILWNTIVSG-----YIDVRNMIEARKLFDQMPKKDVISW 231
+ L EL P+ VIL N S + VR +++ +++ K SW
Sbjct: 521 GKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRV----QKAAAYSW 571
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 194/553 (35%), Positives = 304/553 (54%), Gaps = 58/553 (10%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
+ ITA + ++ A ++F ++ ++ ++NAM GYA N + F + + P
Sbjct: 40 KAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPR----P 95
Query: 99 NCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
+ F++ +L + ++L + L + +K+ N+ + + ++ + A
Sbjct: 96 DSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSYNVMISS-----HANHGLVSLARHY 150
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F E++ V W M+ YI G I AR LF+ E D I WN +++GY+ + EA+
Sbjct: 151 FDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQ 210
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
K+F++MP++DV+SWNTM+SG+A GD+ E +RLF+ P R+VF+W ++ GYA NG+ E
Sbjct: 211 KMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEE 270
Query: 278 ---VLDAF-----------------KRMLTEGR----VFP--NDATIVTVLSACARLGAL 311
V DA +RM+ E + P N A+ T+L+ A+ G L
Sbjct: 271 AKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGML 330
Query: 312 DFSK-------------WVHVYAEYNGYQGNVCVGNALI-------DMYAKCGIIENAVD 351
D ++ W + A Y+ QG + MY KCG +E A
Sbjct: 331 DEARAIFDMMPQKDAVSWAAMLAAYS--QGGFSEETLQLFKEMGRCAMYFKCGNMEEAHS 388
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
F M+ +D+++WNT+I+G A HG G AL +F M+ PD IT +G+L AC+H GL
Sbjct: 389 AFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGL 448
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
VE+G+SYF SM D+ + + EHY CM+DLL RAGRL EAV+ +K MP E D+ +W LL
Sbjct: 449 VEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 508
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
G+ R+++N EL A E++ ELEP+N +V+LSNIY G+W+DV ++++ M + G KK
Sbjct: 509 GASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKK 568
Query: 532 LPGCSSIEVNEVV 544
+PG S IEV V
Sbjct: 569 VPGFSWIEVQNKV 581
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 179/433 (41%), Gaps = 74/433 (17%)
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
V+ I ++ G + A LF R +N ++ GY + A F +P+
Sbjct: 35 VIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPR 94
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
D S+NT+L + + + + LF+EMP ++ S+N +I +AN+GL F
Sbjct: 95 PDSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA 154
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
+ V N +L+A R G + ++ ++ + + NAL+ Y +C
Sbjct: 155 PEKDAVSWN-----GMLAAYIRNGRIQEAR--DLFDSRTEW--DAISWNALMAGYVQCSQ 205
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
IE A +FN M +D+++WNT++SG A G A A LF + + D T+ ++
Sbjct: 206 IEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLF----DVAPIRDVFTWTAVVSG 261
Query: 406 CTHMGLVEEGLSYFQSM---------AMDYSIVPQ-----------------IEHYGCMV 439
G++EE F +M AM + V + + + M+
Sbjct: 262 YAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTML 321
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLL-------------------GSCRVY--- 477
A+AG L EA MP + DAV WA +L G C +Y
Sbjct: 322 TGYAQAGMLDEARAIFDMMP-QKDAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYFKC 380
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
N+E A A E E+E ++ ++ + Y G K+ + MR T S
Sbjct: 381 GNMEEAHSAFE---EMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKT---------S 428
Query: 538 IEVNEVVMLGCLS 550
+ +++ ++G L+
Sbjct: 429 TKPDDITLVGVLA 441
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 303/539 (56%), Gaps = 25/539 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQN 78
+Q ++ + K+ + T TA A +T +F+K D+ +V SWN++ A+
Sbjct: 8 SLQLLTISFKIHKNHFST----TAAATNTNLT---TLFNKYFDRTDVYSWNSLIAELARG 60
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ F+ M+KLD PN TFP +KSC + L G++ H L GF +++FV
Sbjct: 61 GDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVS 120
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF--------- 189
+ALI++YS + A +F E+ RN+V WTS+I GY+ D A +F
Sbjct: 121 SALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSE 180
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANN 241
E+ D + +++S V N + + K K + NT+L YA
Sbjct: 181 GNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKC 240
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G+V +++F++M E++V SWN +I YA NGL + + F ML G N+ T+ T+
Sbjct: 241 GEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTL 300
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACA GAL +H GY NV + ++IDMY KCG E A + F+ M K++
Sbjct: 301 LLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNV 360
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+W +I+G MHG AL +F++M AG P+ ITFI +L AC+H G +EEG +F +
Sbjct: 361 RSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNA 420
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M+ +Y++ P +EHYGCMVDLL RAG + EA + +K M + D V+W +LL +CR++K+VE
Sbjct: 421 MSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVE 480
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
LAE++ L +L+P N +V+L+NIY D GRWKDV R+++ ++D G K PG S +E+
Sbjct: 481 LAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVEL 539
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 183/384 (47%), Gaps = 26/384 (6%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + K HQ Q + G E +++ +I ++ +++ AR +FD+I +N+V+W ++
Sbjct: 98 LNSGKQAHQ---QALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSL 154
Query: 72 FNGYAQNEFHRTVVVLFTQM---------KKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
GY QN+ +++F + +++ + VL +C +++ E +
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV 214
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H + +K G + V L++ Y+ + + KVF +M E++VV W SMI Y G
Sbjct: 215 HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLS 274
Query: 183 VSARCLFE-----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNT 233
A +F + + + +T++ + L DQ+ K +VI +
Sbjct: 275 TDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS 334
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++ Y G E + F+ M E+NV SW +I GY +G E LD F +M+ G V P
Sbjct: 335 IIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAG-VKP 393
Query: 294 NDATIVTVLSACARLGALDFS-KWVHVYA-EYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N T ++VL+AC+ G L+ +W + + EYN G G ++D+ + G I+ A +
Sbjct: 394 NYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG-CMVDLLGRAGYIKEAYN 452
Query: 352 VFNSMDT-KDLITWNTIISGLAMH 374
+ SM +D + W ++++ +H
Sbjct: 453 LIKSMKVRRDFVLWGSLLAACRIH 476
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 283/521 (54%), Gaps = 46/521 (8%)
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + Y + R + ++ Q++K+D + F P VLK+C +++ + G+E+H V
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING------YISCG 180
LK G ++FVG AL+ +Y +E A VF +M ER+VV W++MI +
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE------------------------- 215
+++ ++ P ++ ++V+ + D NM
Sbjct: 211 ELIREMNFMQVRPSEVAMV--SMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL 268
Query: 216 ------------ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
AR+LF+ + +K V+SW M++G + +EE + LF+ R+V W
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
++ YA + + F +M T G V P TIV++LS CA GALD KWVH Y +
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSG-VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 387
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ + + AL+DMYAKCG I A +F ++D+ WN II+G AMHG G AL +
Sbjct: 388 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDI 447
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F EM+ G P+ ITFIG+L AC+H GLV EG F+ M + +VPQIEHYGCMVDLL
Sbjct: 448 FAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLG 507
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG L EA + +K MPI+ + ++W L+ +CR++KN +L ELA +L E+EP+N V+
Sbjct: 508 RAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVL 567
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+SNIY RW D A ++ M+ G KK PG S IEVN V
Sbjct: 568 MSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTV 608
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 52/411 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
Q+ T+ +I V+ GL++ ++ ++ + + YAR +FDK+ +++VVSW+
Sbjct: 136 QVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWST 195
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M ++N+ + L +M + P+ ++ +R G+ +H V++N
Sbjct: 196 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 255
Query: 131 FRANIFVG--TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
++ V TAL+++Y+ + A ++F + ++ VV WT+MI G I + AR L
Sbjct: 256 NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARAL 315
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------PKK---------------- 226
F+ RDV++W ++S Y + +A LFDQM P K
Sbjct: 316 FDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGAL 375
Query: 227 DVISW----------------NTMLSG-YANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
D+ W NT L YA GD+ RLF E R++ WN +I G+
Sbjct: 376 DLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 435
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYN 324
A +G E LD F M +G V PND T + +L AC+ G + F K VH +
Sbjct: 436 AMHGYGEEALDIFAEMERQG-VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVP 494
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ C ++D+ + G+++ A ++ SM K + I W +++ +H
Sbjct: 495 QIEHYGC----MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 298/533 (55%), Gaps = 10/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q++T+ + + ++ A+ +Q+ A KMFD++ ++++VSWN + G++QN
Sbjct: 168 EIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNG 227
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + + L +M+ P+ T VL + + L G+ +H ++ GF + + T
Sbjct: 228 FAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIST 287
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL ++YS ++E A +F MD++ VV W SM++GY+ G+ A +FE E +
Sbjct: 288 ALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDP 347
Query: 198 --ILWNTIVSGYIDVRNMIEAR---KLFDQMP-KKDVISWNTMLSGYANNGDVEECKRLF 251
+ + D+ ++ + K DQ+ D+ N+++S Y+ V+ +F
Sbjct: 348 TGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIF 407
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ R SWN +I GYA NG E L+ F M + G + P+ T+V+V+ A A L
Sbjct: 408 NNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVT 466
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+KW+H + N+ V AL+DMY+KCG I A +F+ + + +ITWN +I G
Sbjct: 467 RHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGY 526
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G AL LF +MK P+ IT++ ++ AC+H GLV+EGL +F+SM DY + P
Sbjct: 527 GTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPS 586
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HYG MVDLL RAGR+ EA DF++ MPI ++ +LG+C+++KN+E+ E A ++L
Sbjct: 587 MDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLF 646
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
EL P V+L+NIY +W VA ++ M G KK PGCS +E+ NEV
Sbjct: 647 ELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEV 699
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 215/414 (51%), Gaps = 9/414 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E + K LHQI V+ +GL ++++ ++ + A ++F+ I D+ ++
Sbjct: 57 ELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYH 116
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+N T + +M+ D P + F +LK C L+ G+E+H ++ N
Sbjct: 117 TMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN 176
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
F AN+F T ++ +Y+ + I+ AYK+F M ER++V W ++I G+ G A L
Sbjct: 177 SFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELV 236
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK---KDVISWNTMLSG-YANN 241
+ D I T++ DV ++ + + + +++ +T L+ Y+
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKC 296
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G VE + +F+ M ++ V SWN ++ GY NG + + F++ML EG + P TI+
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEG-IDPTGVTIMEA 355
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACA LG L+ K+VH + + ++ V N+LI MY+KC ++ A D+FN+++ +
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
++WN +I G A +GR + AL+ F EMK+ G PD T + ++ A + +
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 18/262 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L T+H I ++ S L+K+ ++T ++ ++ + ARK+FD I+D++V++WNA
Sbjct: 462 ELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNA 521
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKN 129
M +GY + R + LF +MKK PN T+ V+ +C + EG +
Sbjct: 522 MIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDY 581
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIV 183
G ++ A+++L I+ A+ M + V+ +M I+ I G+
Sbjct: 582 GLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGE-K 640
Query: 184 SARCLFELAPER---DVILWNTIV-----SGYIDVRNMIEARKLFDQMPKKDVISW-NTM 234
+A+ LFEL P+ V+L N S +VR +E +K + P V+ N +
Sbjct: 641 AAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTME-KKGLKKTPGCSVVELRNEV 699
Query: 235 LSGYANNGDVEECKRLFEEMPE 256
S Y+ + + KR++ + E
Sbjct: 700 HSFYSGSTTHPQSKRIYAFLEE 721
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 302/535 (56%), Gaps = 13/535 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + ++ +G+ I ++ + + A ++F NVV WN M Y Q
Sbjct: 265 QLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQIS 324
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF QM PN FT+P +L++C + GE++H L +K GF ++++V
Sbjct: 325 DLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSG 384
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSA---RCLFELAP 193
LI++YS ++ A ++ ++ ++VV WTSMI GY+ C + + LF + P
Sbjct: 385 VLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWP 444
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKR 249
D I + +S ++ M + +++ ++ DV WN +++ YA G +E
Sbjct: 445 --DNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFS 502
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LFE + ++ +WNG++ G+A +GL+ E L+ F +M G V N T V+ +SA A L
Sbjct: 503 LFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG-VKYNVFTFVSSISASANLA 561
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ K +H G V NALI +Y KCG IE+A F M ++ ++WNTII+
Sbjct: 562 DIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIIT 621
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ HG G AL LF +MK G P+ +TFIG+L AC+H+GLVEEGL YF+SM+ ++ I
Sbjct: 622 SCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIH 681
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+ +HY C+VD+L RAG+L A FV+ MP+ A+A++W LL +CRV+KN+E+ ELA +
Sbjct: 682 PRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKY 741
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ELEP + A++V+LSN Y G+W ++ M+D G +K PG S IEV VV
Sbjct: 742 LLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVV 796
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 222/483 (45%), Gaps = 28/483 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + +T GL + +I A+ + AR++F++++ ++ VSW AM +GYA+N
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V L+ QM +P + VL +C K +G +H V K G + VG A
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE 194
LI LY ++ A +VF EM + V + ++I+ + CG+ SA +FE P
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP- 242
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRL 250
D + ++++ + ++ + ++L + K D I ++L Y G + E +
Sbjct: 243 -DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ NV WN ++ Y + D F +M+ G V PN+ T +L C G
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAG-VRPNEFTYPCLLRTCTYAGE 360
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
++ + +H+ + G++ ++ V LIDMY+K G ++ A + ++ KD+++W ++I+G
Sbjct: 361 INLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAG 420
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAMD 425
H AL F +M+ G PD I + AC + + +G Y + D
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSAD 480
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
SI + +V+L AR GR EA + + D + W ++ + L E
Sbjct: 481 VSI------WNALVNLYARCGRSKEAFSLFEAIE-HKDKITWNGMVSG---FAQSGLYEE 530
Query: 486 ALE 488
ALE
Sbjct: 531 ALE 533
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L K QI V+ +G + +I+ + + A+ F +++++N VSW
Sbjct: 557 SANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSW 616
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVL 127
N + +Q+ + + LF QMK+ PN TF VL +C + + EG +
Sbjct: 617 NTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSS 676
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING-----YISCGD 181
++G ++++ ++ A K EM N +VW ++++ I G+
Sbjct: 677 EHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGE 736
Query: 182 IVSARCLFELAPE 194
+ +A+ L EL P
Sbjct: 737 L-AAKYLLELEPH 748
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 194/533 (36%), Positives = 299/533 (56%), Gaps = 42/533 (7%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
+ + A +F++I ++ WN M +G ++++ + + M + TF +
Sbjct: 20 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 79
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
KSC +++ +R+G+ + +K GF + FV ALI +Y + A KVF M ER+VV
Sbjct: 80 KSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 139
Query: 168 VWTSMINGY-------------------------ISCGDIVSARCLF------------- 189
W S+I GY ++ +SA C
Sbjct: 140 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 199
Query: 190 -ELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
E D+ L NT++ Y R MI+ A ++F QM +K+++SWN M+ GYA G++
Sbjct: 200 DEHGVVVDLYLGNTLIDMY-GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAA 258
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
K+LF EMP R+V SW +I GY+ E + F+ M+ V P++ T+ T LSACA
Sbjct: 259 KKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVS-MVKPDEITVATALSACAH 317
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LG+LD + VH Y + + +V VGN+LIDMY KCG++E A+ VFN M T+D ++W +I
Sbjct: 318 LGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSI 377
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISGLA++G AL++F +M G P TF+G+L AC H+GLV++G+ +F+SM Y
Sbjct: 378 ISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYR 437
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P+++HYGC+VDLL R+G L A +F+K+MPI D VIW LL +C+++ N+ LAE+
Sbjct: 438 LAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVS 497
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
++L L+P N N+V+ S+ Y RW DV +I+ M T +K SSIEV
Sbjct: 498 KKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 550
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 187/400 (46%), Gaps = 50/400 (12%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
++ + G E +++ +I ++ A+K+FD + +++VVSWN++ GY Q
Sbjct: 94 VRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNR 153
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ V+ LF +M+ ++ + T + + ++ G+ L + ++G ++++G
Sbjct: 154 FKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNT 213
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI++Y I+ A +VF +M E+N+V W +MI GY G++V+A+ LF P RDVI W
Sbjct: 214 LIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISW 273
Query: 201 NTIVSGYIDVRNMIEARKLFDQM------P------------------------------ 224
+++ GY + EA KLF +M P
Sbjct: 274 TSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK 333
Query: 225 ---KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
K DV N+++ Y G VE+ ++F +M R+ SW +I G A NG L+
Sbjct: 334 HDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNV 393
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNAL 336
F +ML EG + P T V VL ACA +G +D F + Y + CV
Sbjct: 394 FDQMLKEG-ICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCV---- 448
Query: 337 IDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
+D+ + G ++ A + M D++ W ++S +HG
Sbjct: 449 VDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHG 488
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 299/539 (55%), Gaps = 9/539 (1%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL Q+ ++ L ++ ++ +Q Y+ +F N+ +N + N
Sbjct: 25 TFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLIN 84
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G+ N + LF ++K + FTFP+VLK+C + + + G +LH LV+K GF
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNH 144
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---- 189
++ T+L+ +YS + A+KVF E+ ER+VV WT++ +GY + G A LF
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMV 204
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVE 245
E+ D ++S + V ++ + M +K+ T+++ YA G +E
Sbjct: 205 EMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ + +F+ M E+++ +W+ +I GYA+N E ++ F +ML E + P+ +IV LS+C
Sbjct: 265 KARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQEN-LKPDQFSIVGFLSSC 323
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LGALD +W + + + N+ + NALIDMYAKCG + +VF M KD++ N
Sbjct: 324 ASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
ISGLA +G + ++F + + G PDG TF+G+LC C H GL+++GL +F +++
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y++ +EHYGCMVDL RAG L +A + MP+ +A++W LL CR+ K+ +LAE
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ L LEP N N+V LSNIY GRW + A ++ M G KK+PG S IE+ V
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTV 562
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/530 (35%), Positives = 303/530 (57%), Gaps = 10/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ SG + + + ++ + ++ ARK+FD++T+++V+SWN++ NGY N
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVG 138
+ +F QM + T V C + G +HC +K F R + F
Sbjct: 276 LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN 335
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER--- 195
T L+++YS +++A VF EM R+VV +TSMI GY G A LFE E
Sbjct: 336 T-LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 196 -DVILWNTIVSGYIDVRNMIEARKLFDQMPKKD----VISWNTMLSGYANNGDVEECKRL 250
DV +++ R + E +++ + + + D + N ++ YA G + E + +
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F EM +++ SWN +IGGY+ N E L F +L E R P++ T+ VL ACA L A
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
D + +H Y NGY + V N+L+DMYAKCG + A +F+ + +KDL++W +I+G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAG 574
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
MHG G A++LF++M+ AG PD I+F+ +L AC+H GLV+EG +F M + I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+EHY C+VD+LAR G L++A F++ MPI DA IW LL CR++ +V+LAE E++
Sbjct: 635 TVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKV 694
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELEP+N +V+++NIY + +W++V R++ + G +K PGCS IE+
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEI 744
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 212/423 (50%), Gaps = 28/423 (6%)
Query: 42 TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCF 101
T C LK+ A ++FD++ + + WN + N A++ + LF +M + +
Sbjct: 140 TNCGDLKE---ASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
TF V KS + ++ GE+LH +LK+GF VG +L+ Y +++A KVF EM
Sbjct: 197 TFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEM 256
Query: 162 DERNVVVWTSMINGYISCGDI-----VSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
ER+V+ W S+INGY+S G V + LF E D+ ++ +G D R +
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLFS-GIEIDLATIVSVFAGCADSRLISLG 315
Query: 217 RKLF-----DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
R + ++D NT+L Y+ GD++ K +F EM R+V S+ +I GYA
Sbjct: 316 RAVHCFGVKACFSREDRFC-NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAR 374
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
GL E + F+ M EG + P+ T+ VL+ CAR LD K VH + + N ++
Sbjct: 375 EGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIF 433
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V NAL+DMYAKCG + A VF+ M KD+I+WNT+I G + + ALSLF+ +
Sbjct: 434 VSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEK 493
Query: 392 EM-PDGITFIGILCACTHMGLVEEGL---------SYFQSMAMDYSIVPQIEHYGCMVDL 441
PD T +L AC + ++G YF + S+V G + L
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL--L 551
Query: 442 LAR 444
LAR
Sbjct: 552 LAR 554
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 195/459 (42%), Gaps = 83/459 (18%)
Query: 58 DKIT--DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
D IT D++V N + ++ + V L K D P T VL+ C +
Sbjct: 52 DSITTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKS 109
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L++G+E+ + NGF + +G+ L +Y+ ++ A +VF ++ + W ++N
Sbjct: 110 LKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNE 169
Query: 176 YISCGDIVSARCLFE--------------------LAPERDV------------------ 197
GD + LF+ + R V
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGER 229
Query: 198 -ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ N++V+ Y+ + ARK+FD+M ++DVISWN++++GY +NG E+
Sbjct: 230 NSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG--------- 280
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
L F +ML G + + ATIV+V + CA + +
Sbjct: 281 ----------------------LSVFVQMLFSG-IEIDLATIVSVFAGCADSRLISLGRA 317
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH + + N L+DMY+KCG +++A VF M + ++++ ++I+G A G
Sbjct: 318 VHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGL 377
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIE 433
A+ LF EM+ G PD T +L C L++EG + + M + I
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVS-- 435
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
++D+ A+ G + EA M ++ D + W ++G
Sbjct: 436 --NALMDMYAKCGSMREAELVFSEMRVK-DIISWNTVIG 471
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 311/545 (57%), Gaps = 39/545 (7%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+K T H+ L KHLH +++ SGL S+ ++I+ + +Q++ RK+FD+I
Sbjct: 36 IKTYTRDHA--LNQGKHLH---ARLIVSGLASSNNFASKLISFYTETRQLSIVRKLFDRI 90
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
N + Y+++ F++ V+ +F++M+ PN F P VL++C + L+ G+
Sbjct: 91 PKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGK 150
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
LH ++L++ F +++ V TALI++YS + +E A KVF M E+++V +M+ GY G
Sbjct: 151 ILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNG 210
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
A E G++ ++E ++ D P ++++WNT++SG+A
Sbjct: 211 ----------FAKE-----------GFL----LVEQMQMLDIKP--NLVTWNTLISGFAQ 243
Query: 241 NGDVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
GD + LF M E +V SW +I + N AFK+ML G +PN A
Sbjct: 244 AGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHG-AYPNSA 302
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
TI ++L ACA L + + +H YA G + ++ V +A++DMY+KCG+I A +F+ M
Sbjct: 303 TISSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKM 362
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEG 415
+ +TWN++I G A HG A+ LF++M K + D ++F +L AC+H LVE G
Sbjct: 363 PERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELG 422
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
S F M Y IVP++EHY CM+DLL RAG+L+EA D +K MP+E D +W LLG+CR
Sbjct: 423 QSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLGACR 482
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
+ ++LAE+A L ELEP+N N ++LSN+Y D G W++VA++K+ R +K
Sbjct: 483 QHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKMGKRKR-LRKFSAY 541
Query: 536 SSIEV 540
S I++
Sbjct: 542 SWIQL 546
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/518 (37%), Positives = 293/518 (56%), Gaps = 40/518 (7%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+ YA K+FD+I +V N + G AQ+ V L+T+M+K P+ +TF VLK+
Sbjct: 28 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 87
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C K+ G H V+++GF N +V ALI ++
Sbjct: 88 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHA----------------------- 124
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
+CGD+ A LF+ + + + W+++ SGY + EA +LFD+MP KD +
Sbjct: 125 --------NCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 176
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
+WN M++G +++ + LF+ E++V +WN +I GY N G E L FK M G
Sbjct: 177 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 236
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYA-EYNGYQGNVCVG----NALIDMYAKCG 344
P+ TI+++LSACA LG L+ K +H+Y E ++ VG NALIDMYAKCG
Sbjct: 237 E-HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 295
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
I+ A++VF + +DL TWNT+I GLA+H G++ +F EM+ P+ +TFIG++
Sbjct: 296 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 354
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+H G V+EG YF M Y+I P I+HYGCMVD+L RAG+L EA FV+ M IE +A
Sbjct: 355 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNA 414
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
++W LLG+C++Y NVEL + A E+L + ++V+LSNIY G+W V +++
Sbjct: 415 IVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMF 474
Query: 525 RDTGFKKLPGCSSIEVNE--VVMLGCLSRELDRKSIVR 560
DT KK G S IE ++ ++M LS E + +S R
Sbjct: 475 DDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRSRGR 512
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRI-----------------ITACAQLK 48
G SE + + H++ +TSG K I + IT C + K
Sbjct: 130 GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCK 189
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+M AR++FD+ T+++VV+WNAM +GY + + + +F +M+ P+ T +L
Sbjct: 190 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 249
Query: 109 SCVKINALREGEELHCLVLKNG-FRANIFVGT----ALIELYSTGKAIEAAYKVFGEMDE 163
+C + L G+ LH +L+ ++I+VGT ALI++Y+ +I+ A +VF + +
Sbjct: 250 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 309
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWNTIV-----------SGYIDVR 211
R++ W ++I G + A E+ E + + +W V SG +D
Sbjct: 310 RDLSTWNTLIVGLA----LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD-- 363
Query: 212 NMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
E RK F M + ++ + M+ G +EE E M E N W L
Sbjct: 364 ---EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 420
Query: 266 IGG 268
+G
Sbjct: 421 LGA 423
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 166/382 (43%), Gaps = 60/382 (15%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+LE + +VV G ++Y+ +I A + A ++FD + V+W++
Sbjct: 90 KLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSS 149
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M +GYA+ + LF +M D + + +++ C+K
Sbjct: 150 MTSGYAKRGKIDEAMRLFDEMPYKDQV----AWNVMITGCLKC----------------- 188
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
K +++A ++F E++VV W +MI+GY++CG A +F
Sbjct: 189 ------------------KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 230
Query: 190 ---ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS---------WNTMLSG 237
+ DV+ +++S + ++ ++L + + +S WN ++
Sbjct: 231 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 290
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL--FFEVLDAFKRMLTEGRVFPND 295
YA G ++ +F + +R++ +WN LI G A + E+ + +R+ +V+PN+
Sbjct: 291 YAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQRL----KVWPNE 346
Query: 296 ATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T + V+ AC+ G +D K+ + + + N+ ++DM + G +E A
Sbjct: 347 VTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVE 406
Query: 355 SMDTK-DLITWNTIISGLAMHG 375
SM + + I W T++ ++G
Sbjct: 407 SMKIEPNAIVWRTLLGACKIYG 428
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 305/532 (57%), Gaps = 14/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + G+ + ++ I+ + + ARK+FD + +++ V WN M +G+++N +
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ +F M + + T VL + ++ R G + CL K G ++++V T
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTG 254
Query: 141 LIELYST-GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVI 198
LI LYS GK+ + +F ++D+ +++ + +MI+GY + SA LF EL +
Sbjct: 255 LISLYSKCGKSCKGRI-LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313
Query: 199 LWNTIVSGYIDVR---NMIEARKLFDQMPKKDVI----SWNTMLSG-YANNGDVEECKRL 250
+T+V G I V N ++ +L + K I S +T L+ Y +V+ ++L
Sbjct: 314 NSSTLV-GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+E PE+++ SWN +I GY NGL + F+ M+ + + PN T+ ++LSACA+LGA
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGA 430
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L KWVH + + NV V AL+DMYAKCG I A +F+ M K+++TWN +I+G
Sbjct: 431 LSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITG 490
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+HG G AL LF+EM +G P G+TF+ IL AC+H GLV EG F SMA +Y P
Sbjct: 491 YGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQP 550
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
EHY CMVD+L RAG+L A++F++RMP+E +W LLG+C ++KN E+A +A +RL
Sbjct: 551 MSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRL 610
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+L+P+N +V+LSNIY + A ++ ++ K PGC+ IE+++
Sbjct: 611 FQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDD 662
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 208/494 (42%), Gaps = 75/494 (15%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T L QIQ Q++ G+ ++ L + + R++F+K++ ++ +N +
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 74 GYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G++ N ++ + L+T + KK + P+ FT+ + + ++ R G LH + +G
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---------------- 176
+N+FVG+A+++LY E A KVF M ER+ V+W +MI+G+
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 177 ----ISCGDIVSARCLFELAP-------------------ERDVILWNTIVSGYIDVRNM 213
+S A L +A DV + ++S Y
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+ R LFDQ+ + D+IS+N M+SGY N + E LF E+
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL------------------- 306
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L + +R+ N +T+V ++ L S+ + + G V
Sbjct: 307 -----LASGQRV--------NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS 353
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
AL +Y + ++ A +F+ K L +WN +ISG +G A+SLF EM
Sbjct: 354 TALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS- 412
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
P+ +T IL AC +G + G + + + + +VD+ A+ G + EA
Sbjct: 413 PNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 454 FVKRMPIEADAVIW 467
M ++ + V W
Sbjct: 472 LFDLM-VDKNVVTW 484
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 305/532 (57%), Gaps = 14/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + G+ + ++ I+ + + ARK+FD + +++ V WN M +G+++N +
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ +F M + + T VL + ++ R G + CL K G ++++V T
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTG 254
Query: 141 LIELYST-GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVI 198
LI LYS GK+ + +F ++D+ +++ + +MI+GY + SA LF EL +
Sbjct: 255 LISLYSKCGKSCKGRI-LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313
Query: 199 LWNTIVSGYIDVR---NMIEARKLFDQMPKKDVI----SWNTMLSG-YANNGDVEECKRL 250
+T+V G I V N ++ +L + K I S +T L+ Y +V+ ++L
Sbjct: 314 NSSTLV-GLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+E PE+++ SWN +I GY NGL + F+ M+ + + PN T+ ++LSACA+LGA
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGA 430
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L KWVH + + NV V AL+DMYAKCG I A +F+ M K+++TWN +I+G
Sbjct: 431 LSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITG 490
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+HG G AL LF+EM +G P G+TF+ IL AC+H GLV EG F SMA +Y P
Sbjct: 491 YGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQP 550
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
EHY CMVD+L RAG+L A++F++RMP+E +W LLG+C ++KN E+A +A +RL
Sbjct: 551 MSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRL 610
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+L+P+N +V+LSNIY + A ++ ++ K PGC+ IE+++
Sbjct: 611 FQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDD 662
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/537 (23%), Positives = 224/537 (41%), Gaps = 78/537 (14%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T L QIQ Q++ G+ ++ L + + R++F+K++ ++ +N +
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G++ N ++ + L+T ++K + P+ FT+ + + ++ R G LH + +G
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---------------- 176
+N+FVG+A+++LY E A KVF M ER+ V+W +MI+G+
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 177 ----ISCGDIVSARCLFELAP-------------------ERDVILWNTIVSGYIDVRNM 213
+S A L +A DV + ++S Y
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+ R LFDQ+ + D+IS+N M+SGY N + E LF E+
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL------------------- 306
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L + +R+ N +T+V ++ L S+ + + G V
Sbjct: 307 -----LASGQRV--------NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS 353
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
AL +Y + ++ A +F+ K L +WN +ISG +G A+SLF EM
Sbjct: 354 TALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS- 412
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
P+ +T IL AC +G + G + + + + +VD+ A+ G + EA
Sbjct: 413 PNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKN-VELAELALERLTELEPKNPANFVMLSNIYG 509
M ++ + V W ++ ++ + E +L E L P P LS +Y
Sbjct: 472 LFDLM-VDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP--PTGVTFLSILYA 525
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 298/535 (55%), Gaps = 14/535 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+T+G + + + ++ A+ +Q+ A KMF+++ +++VSWN + GYAQN
Sbjct: 163 EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNG 222
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F R V + QM++ P+ T VL + + ALR G +H + GF + V T
Sbjct: 223 FARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVAT 282
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A+++ Y ++ +A VF M RNVV W +MI+GY G+ A F + V
Sbjct: 283 AMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEP 342
Query: 200 WNTIVSGYI-------DVRNMIEARKLFDQMPKK---DVISWNTMLSGYANNGDVEECKR 249
N + G + D+ +L D+ KK DV N+++S Y+ V+
Sbjct: 343 TNVSMMGALHACANLGDLERGRYVHRLLDE--KKIGFDVSVMNSLISMYSKCKRVDIAAS 400
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F + + V +WN +I GYA NG E L+ F M + + P+ T+V+V++A A L
Sbjct: 401 VFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHD-IKPDSFTLVSVITALADLS 459
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+KW+H A NV V ALID +AKCG I+ A +F+ M + +ITWN +I
Sbjct: 460 VTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMID 519
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +G G AL LF+EM+N P+ ITF+ ++ AC+H GLVEEG+ YF+SM +Y +
Sbjct: 520 GYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLE 579
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HYG MVDLL RAGRL +A F++ MP++ + +LG+CR++KNVEL E +
Sbjct: 580 PTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADE 639
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
L +L+P + V+L+N+Y W VAR++ AM G +K PGCS +E+ NEV
Sbjct: 640 LFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEV 694
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 229/466 (49%), Gaps = 11/466 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E + K LHQI ++ +G ++I+ + +T A ++F+ + + V ++
Sbjct: 52 ELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYH 111
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+N R V + +M+ + MP + F +L+ + LR G E+H +V+ N
Sbjct: 112 TMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITN 171
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF++N+F TA++ LY+ + IE AYK+F M +R++V W +++ GY G A +
Sbjct: 172 GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVV 231
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKL----FDQMPKKDVISWNTMLSGYANN 241
E + D I +++ D++ + R + F + V ML Y
Sbjct: 232 LQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKC 291
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G V + +F+ M RNV SWN +I GYA NG E F +ML EG V P + +++
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEG-VEPTNVSMMGA 350
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACA LG L+ ++VH + +V V N+LI MY+KC ++ A VF ++ K +
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV 410
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+TWN +I G A +G AL+LF EM++ PD T + ++ A + + + +
Sbjct: 411 VTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQA-KWIHG 469
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+A+ + + ++D A+ G + A M E + W
Sbjct: 470 LAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQ-ERHVITW 514
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 18/256 (7%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L T+ I + + ++K+ ++ +I A+ + ARK+FD + +++V++WNAM
Sbjct: 458 LSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAM 517
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-G 130
+GY N R + LF +M+ PN TF V+ +C + EG + +N G
Sbjct: 518 IDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYG 577
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGYISCGDIVS 184
+ A+++L ++ A+K +M + + V +M I+ + G+ +
Sbjct: 578 LEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGE-KT 636
Query: 185 ARCLFELAPER---DVILWNTIVSGYI-----DVRNMIEARKLFDQMPKKDVISW-NTML 235
A LF+L P+ V+L N S + VR +E +K + P ++ N +
Sbjct: 637 ADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAME-KKGIQKTPGCSLVELRNEVH 695
Query: 236 SGYANNGDVEECKRLF 251
+ Y+ + + + KR++
Sbjct: 696 TFYSGSTNHPQSKRIY 711
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 278/526 (52%), Gaps = 65/526 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVSWNAMFNGY 75
L QI Q++ +GL + +++ CA + YAR +FD+I N WN M GY
Sbjct: 34 LRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGY 93
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ ++ ++L+ M N +TFP +LK+C ++A E +++H ++K GF +
Sbjct: 94 SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGS-- 151
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
E+Y+T S++N Y GDI SAR L
Sbjct: 152 -------EIYTT----------------------NSLLNVYSKSGDIKSARLL------- 175
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
FDQ+ ++D +SWN+M+ GY G++E +F MP
Sbjct: 176 ------------------------FDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMP 211
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERN+ SW +I G G E L+ F RM T G N A +V+ L ACA LG LD K
Sbjct: 212 ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVA-LVSTLQACADLGVLDQGK 270
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
W+H Y + + + + +G LIDMYAKCG +E A++VF M+ K + W +ISG A+HG
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
RG AL F +M+ AG P+ +TF GIL AC+H GLV E F+SM + P IEHY
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY 390
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GCMVDLL RAG L EA + ++ MP++ +A IW LL +C ++ N+EL + + L +++P
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDP 450
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ ++ L++I+ G W AR++ M++ G KLPGCS I VN
Sbjct: 451 GHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVN 496
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 301/537 (56%), Gaps = 10/537 (1%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
HQ+ Q++ + L +S P I A QL + A K F+ IT +N+ SWN + +++N
Sbjct: 32 HQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKN 91
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ V+ LF +M K + + F +K+C ++ + + H L +K + +V
Sbjct: 92 KCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVA 151
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+ +Y+ ++E A+KVF E+ +N V+W MI G+++ + LF
Sbjct: 152 PALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFE 211
Query: 199 LWNTIVSGYI----DVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDVEECKR 249
L +V G I +V E + KK+ I N +++ Y G ++ +
Sbjct: 212 LDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALK 271
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LFEE+ R+V W+ +I G+A NG E + F++ML + V PN T +++ AC+ LG
Sbjct: 272 LFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADS-VTPNSVTFASIVLACSSLG 330
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+L + VH Y NG + +V + IDMYAKCG I A VF + K++ +W+T+I+
Sbjct: 331 SLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMIN 390
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G MHG A AL+LF+EM++ ++P+ +TF+ +L AC+H G +EEG S+F+SM+ DY I
Sbjct: 391 GFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGIT 450
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P EHY CMVDLL RAG++ EA+ F+ MP E A W LLG+CR+++ ELAE ++
Sbjct: 451 PVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKK 510
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
L LE +VMLSNIY D+G W+ V + ++ M + G K+ G +SIE+ E + L
Sbjct: 511 LLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYL 567
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 170/367 (46%), Gaps = 16/367 (4%)
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L +L+ +L N ++ G + Y ++ A K F + N+ W +++
Sbjct: 28 LASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILAS 87
Query: 176 YISCGDIVSARCLFE--LAPERDVILWNTI--VSGYIDVRNMIEARKLFDQMPKK----- 226
+ LF+ L + V +N + V + ++ + KLF + K
Sbjct: 88 HSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGL-SLFQGAKLFHSLAIKLRLEG 146
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D +++ Y G +EE ++FEE+P +N W +I G+ N F V + F RM
Sbjct: 147 DPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMR 206
Query: 287 TEGRVFPNDATIVT-VLSACARLGALDFSKWVH-VYAEYNGYQGNVCVGNALIDMYAKCG 344
G F D +V ++ AC + A K H + + N N + +L+DMY KCG
Sbjct: 207 RSG--FELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCG 264
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
++ A+ +F + +D++ W+ II+G A +GR ++S+F +M P+ +TF I+
Sbjct: 265 FLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVL 324
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+ +G +++G S M + + +++Y +D+ A+ G + A ++P E +
Sbjct: 325 ACSSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNV 382
Query: 465 VIWANLL 471
W+ ++
Sbjct: 383 FSWSTMI 389
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 305/533 (57%), Gaps = 9/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + V+ +G+ + ++ + A +MF +NVV WN M + + +
Sbjct: 335 QLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLD 394
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F QM+ +PN FT+P +L++C + AL GE++H V+K GF+ N++V +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
LI++Y+ ++ A+ + + E +VV WT++I+GY A F+ R
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQS 514
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLF 251
D I +++ +S ++ + + R++ Q +D+ N ++S YA G ++E F
Sbjct: 515 DNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEF 574
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E++ ++ SWNGLI G+A +G + L F +M ++ + T + +SA A + +
Sbjct: 575 EKIDAKDSISWNGLISGFAQSGYCEDALKVFAQM-NRAKLEASFFTFGSAVSAAANIANI 633
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H G+ ++ V NALI YAKCG IE+A F M K+ ++WN +I+G
Sbjct: 634 KQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGY 693
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ HG G A++LF +MK GEMP+ +TF+G+L AC+H+GLV +GL YF+SM+ ++ +VP+
Sbjct: 694 SQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPK 753
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
HY C+VDL++RAG L+ A F++ MPIE DA IW LL +C V+KNVE+ E A + L
Sbjct: 754 PAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLL 813
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP++ A +V+LSN+Y G+W + + MR+ G KK PG S IEV V
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSV 866
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 223/468 (47%), Gaps = 19/468 (4%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
++ QI +++ GL S I+ +I A+ + ARK+FD + ++ VSW AM +G+
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGF 188
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+QN + + LF +M P + F VL C KI GE+LH LV K G
Sbjct: 189 SQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLET 248
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----- 190
+V AL+ LYS +A KVF +M ++ V + S+I+G G A LF
Sbjct: 249 YVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRD 308
Query: 191 -LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVE 245
L P D + +++S + + +L + K D+I +L Y N D++
Sbjct: 309 YLKP--DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIK 366
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+F NV WN ++ + E F++M +G + PN T ++L C
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKG-LIPNQFTYPSILRTC 425
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
+GALD + +H G+Q NV V + LIDMYAK G ++ A + ++ D+++W
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAM 424
+ISG A H A AL F EM N G D I F + AC + + +G + QS
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA-DAVIWANLL 471
YS I + +V L AR GR+ EA +++ I+A D++ W L+
Sbjct: 546 GYSEDLSIGN--ALVSLYARCGRIKEA--YLEFEKIDAKDSISWNGLI 589
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 229/487 (47%), Gaps = 23/487 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +++ G + +++ L + K+F+ + +++V SW+ + +G+ + +
Sbjct: 31 KLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKK 90
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVG 138
V+ LF+ M + + P +F VL++C +R E++H ++ +G + +
Sbjct: 91 MSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIIS 150
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI LY+ I +A KVF + ++ V W +MI+G+ G A LF +
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210
Query: 199 ----LWNTIVSG-----YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
++++++SG DV + A +F + N +++ Y+ + ++
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHAL-VFKYGSSLETYVCNALVTLYSRMPNFVSAEK 269
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M ++ S+N LI G A G L+ F +M + + P+ T+ ++LSACA G
Sbjct: 270 VFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRD-YLKPDCVTVASLLSACASNG 328
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + +H Y G ++ V AL+D+Y C I+ A ++F + T++++ WN ++
Sbjct: 329 ALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLV 388
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSI 428
+ + +F +M+ G +P+ T+ IL CT +G ++ G + Q + +
Sbjct: 389 AFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF-- 446
Query: 429 VPQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
Q Y C ++D+ A+ G+L + + R E D V W L+ Y L A
Sbjct: 447 --QFNVYVCSVLIDMYAKHGKL-DTAHVILRTLTEDDVVSWTALISG---YAQHNLFAEA 500
Query: 487 LERLTEL 493
L+ E+
Sbjct: 501 LKHFKEM 507
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 28/415 (6%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
NC T+ +L C+ +L E ++LH +LK GF + L+++Y ++ KVF
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 159 GEMDERNVVVWTSMINGYISCG------DIVSARCLFELAPERDVILWNTIV---SGY-I 208
+M R+V W +I+G++ D+ S C+ E I + +++ SG+ I
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFS--CMIEENVSPTEISFASVLRACSGHRI 126
Query: 209 DVR--NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
+R I AR + + +IS N ++ YA NG + +++F+ + ++ SW +I
Sbjct: 127 GIRYAEQIHARIICHGLLCSPIIS-NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMI 185
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
G++ NG E + F M T G +FP +VLS C ++ D + +H G
Sbjct: 186 SGFSQNGYEEEAIHLFCEMHTAG-IFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGS 244
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
V NAL+ +Y++ +A VF+ M +KD +++N++ISGLA G GAL LF +
Sbjct: 245 SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTK 304
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
MK PD +T +L AC G + +G S + I + G ++DL
Sbjct: 305 MKRDYLKPDCVTVASLLSACASNGALCKG-EQLHSYVIKAGISSDMIVEGALLDLYVNCS 363
Query: 447 RLAEAVDFVKRMPIEADAVIW----------ANLLGSCRVYKNVELAELALERLT 491
+ A + E + V+W NL S R+++ +++ L + T
Sbjct: 364 DIKTAHEMFLTAQTE-NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFT 417
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 299/569 (52%), Gaps = 45/569 (7%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R + A +++ AR++FD+ D++VVSW A+ YA+ LF + DA
Sbjct: 40 RRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALF---DRPDARR 96
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY--- 155
N T+ +L + + E E L + N+ ++E Y++ + A+
Sbjct: 97 NVVTWTALLSGYARAGRVDEAEAL----FQRMPERNVVSWNTMLEAYTSAGRVRDAWTLF 152
Query: 156 ----------------------------KVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+F M ERNV+ WT+M+ G G + AR
Sbjct: 153 DGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARA 212
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ PER+V+ WN ++SGY + EA LF +MP +D+ SWN M++G+ + D+E
Sbjct: 213 LFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERA 272
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ LF++MP RNV +W ++ GY + L F ML EG + PN T + + AC+
Sbjct: 273 QDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEG-IRPNQVTFLGAVDACSN 331
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L L + VH +Q + + + L+++YAKCG I A VF+ KD+I+WN +
Sbjct: 332 LAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGM 391
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ A HG G A+ L+ +M+ G P+ +T++G+L AC+H GLV+EGL F+ M D S
Sbjct: 392 IAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I + EHY C++DL +RAGRL +A + + +E + +W LLG C + N + +LA
Sbjct: 452 IAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAA 511
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLG 547
L E EP N + +L NIY G+WK+ A+I+ M D G KK PGCS IEV V +
Sbjct: 512 RNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHV- 570
Query: 548 CLSRELDRKSIVRAEANMIKLLPQNNHPL 576
+SR+ KS +E+++I L Q+ H +
Sbjct: 571 FVSRD---KS--HSESDLINSLLQDIHDI 594
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 18/259 (6%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ A G V + +RLF+ P+R+V SW L+ YA G+ + F R + R
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR--PDAR- 95
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N T +LS AR G +D ++ + + NV N +++ Y G + +A
Sbjct: 96 -RNVVTWTALLSGYARAGRVDEAEALFQRMP----ERNVVSWNTMLEAYTSAGRVRDAWT 150
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M +D +WN +++ L G A LF M M + ++ G
Sbjct: 151 LFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVM----AWTTMVAGIARSGS 206
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V+E + F M + ++V + M+ AR R+ EA D +MP D W ++
Sbjct: 207 VDEARALFDGMP-ERNVVS----WNAMISGYARNHRIDEAHDLFMKMPTR-DIASWNIMI 260
Query: 472 GSCRVYKNVELAELALERL 490
+++E A+ +++
Sbjct: 261 TGFIQDRDLERAQDLFDKM 279
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + + + +I ++ A+ ++ ARK+FD +++V+SWN M YA +
Sbjct: 339 QQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHH 398
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN---GFRANI 135
+ L+ +M++ PN T+ +L +C + EG + ++K+ R
Sbjct: 399 GVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEH 458
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD----IVSARCLFE 190
+ T LI+L S + A ++ + E + VW +++ G S G+ ++AR L E
Sbjct: 459 Y--TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLE 516
Query: 191 LAP 193
P
Sbjct: 517 AEP 519
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
G+V N + A G + +A +F+ +D+++W +++ A G + H+
Sbjct: 33 GHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQG-------MLHDA 85
Query: 388 KNAGEMPDG----ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
+ + PD +T+ +L G V+E + FQ M + ++V + M++
Sbjct: 86 RALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMP-ERNVVS----WNTMLEAYT 140
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
AGR+ +A MP+ DA W LL + N++ A +R+ E
Sbjct: 141 SAGRVRDAWTLFDGMPVR-DAGSWNILLAALVRSGNMDKARKLFDRMPE 188
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 299/545 (54%), Gaps = 57/545 (10%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
++D A + + L ++ V L +S Y+ +I+ C ++ +A ++F ++
Sbjct: 12 VEDAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQV 71
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+ N+ NAM YAQN HR + + ++ L P FP + SC
Sbjct: 72 REPNLHLHNAMIKAYAQN--HRHLDAITVYIRMLRRRP----FPWI--SCT--------- 114
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
G R F L++ A++ +V G
Sbjct: 115 --------GGDR---FTYPFLLKACGGLMALDLGKQVHGH-------------------- 143
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
+V + C E + I+ N+++ Y +++ ARK+FD M ++DV+SWNT++S +A
Sbjct: 144 -VVRSGC------ESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHAR 196
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G + + + +F MP++ V SW L+ GY G F ++AF+ M EG P+D +IV
Sbjct: 197 LGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEG-FEPDDVSIVA 255
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
VL ACA+LGAL+ +W++ Y + V NAL++MYAKCG I+ A+ +FN M KD
Sbjct: 256 VLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKD 315
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYF 419
+I+W+T++ GLA HGR A+ LF EM+ G + P+GITF+G+L AC+H GL++EGL YF
Sbjct: 316 VISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYF 375
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y I P +EHYGC+VDLL R+G++ +D + MP+ ADA IW ++L +CR + +
Sbjct: 376 DRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGD 435
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
V+ A LA ERL LEP++ N VML+N+Y RW +VA + A+R +K PGCS IE
Sbjct: 436 VDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIE 495
Query: 540 VNEVV 544
V+ VV
Sbjct: 496 VDNVV 500
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 301/545 (55%), Gaps = 13/545 (2%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
T A +++L K LH + ++ +G ++T ++ ++ ++ +A K+FD + +N
Sbjct: 14 TYAKTKRLRRGKQLHAL---LICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+VSW AM +G +QN + F M+ +P F F +++C + ++ G+++HC
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
L LK G + +FVG+ L ++YS A+ A KVF EM ++ V WT+MI+GY G+
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEA----RKLFDQMPK----KDVISWNTMLS 236
A F+ + +V + ++ + ++A R + + K D+ N +
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 237 GYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
Y+ GD+E +F E RNV S+ LI GY + L F + +G + PN+
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG-IEPNE 309
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T +++ ACA AL+ +H + + V + L+DMY KCG++E A+ F+
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 369
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ I WN+++S HG G A+ +F M + G P+ ITFI +L C+H GLVEEG
Sbjct: 370 IGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
L YF SM Y +VP EHY C++DLL RAGRL EA +F+ RMP E +A W + LG+CR
Sbjct: 430 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++ + E+ +LA E+L +LEPKN V+LSNIY + +W+DV +++ MRD KKLPG
Sbjct: 490 IHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGY 549
Query: 536 SSIEV 540
S ++V
Sbjct: 550 SWVDV 554
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 175/388 (45%), Gaps = 75/388 (19%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
V+++ K LR G++LH L++ G+ F+ L+ +YS ++ A K+F M +RN
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 166 VVVWTSMINGYIS----------------CGDIVSA----------------------RC 187
+V WT+MI+G CG++ + C
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 188 L-FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
L + ++ + + + Y M +A K+F++MP KD +SW M+ GY+ G+ E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE- 189
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
E L AFK+M+ E V + + + L AC
Sbjct: 190 ------------------------------EALLAFKKMIDE-EVTIDQHVLCSTLGACG 218
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN-SMDTKDLITWN 365
L A F + VH G++ ++ VGNAL DMY+K G +E+A +VF + ++++++
Sbjct: 219 ALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYT 278
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAM 424
+I G + LS+F E++ G P+ TF ++ AC + +E+G + Q M +
Sbjct: 279 CLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKI 338
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAV 452
++ P + +VD+ + G L +A+
Sbjct: 339 NFDEDPFVSSI--LVDMYGKCGLLEQAI 364
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
+ V+ A+ L K +H GY + N L++MY+KCG +++A+ +F++M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
++L++W +ISGL+ + + + A+ F M+ GE+P F + AC +G +E G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG- 125
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+A+ + I ++ + D+ ++ G + +A + MP + D V W ++
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSK 184
Query: 477 YKNVELAELALERLTELE 494
E A LA +++ + E
Sbjct: 185 IGEFEEALLAFKKMIDEE 202
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 301/545 (55%), Gaps = 13/545 (2%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
T A +++L K LH + ++ +G ++T ++ ++ ++ +A K+FD + +N
Sbjct: 14 TYAKTKRLRRGKQLHAL---LICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+VSW AM +G +QN + F M+ +P F F +++C + ++ G+++HC
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
L LK G + +FVG+ L ++YS A+ A KVF EM ++ V WT+MI+GY G+
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEA----RKLFDQMPK----KDVISWNTMLS 236
A F+ + +V + ++ + ++A R + + K D+ N +
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 237 GYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
Y+ GD+E +F E RNV S+ LI GY + L F + +G + PN+
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG-IEPNE 309
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T +++ ACA AL+ +H + + V + L+DMY KCG++E+A+ F+
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDE 369
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ I WN+++S HG G A+ F M + G P+ ITFI +L C+H GLVEEG
Sbjct: 370 IGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
L YF SM Y +VP EHY C++DLL RAGRL EA +F+ RMP E +A W + LG+CR
Sbjct: 430 LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++ + E+ +LA E+L +LEPKN V+LSNIY + +W+DV +++ MRD KKLPG
Sbjct: 490 IHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGY 549
Query: 536 SSIEV 540
S ++V
Sbjct: 550 SWVDV 554
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 174/388 (44%), Gaps = 75/388 (19%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
V+++ K LR G++LH L++ G+ F+ L+ +YS ++ A K+F M +RN
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 166 VVVWTSMINGYIS----------------CGDIVSA----------------------RC 187
+V WT+MI+G CG++ + C
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 188 L-FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
L + ++ + + + Y M +A K+F++MP KD +SW M+ GY+ G+ E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE- 189
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
E L AFK+M+ E V + + + L AC
Sbjct: 190 ------------------------------EALLAFKKMIDE-EVTIDQHVLCSTLGACG 218
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN-SMDTKDLITWN 365
L A F + VH G++ ++ VGNAL DMY+K G +E+A +VF + ++++++
Sbjct: 219 ALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYT 278
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAM 424
+I G + LS+F E++ G P+ TF ++ AC + +E+G + Q M +
Sbjct: 279 CLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKI 338
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAV 452
++ P + +VD+ + G L A+
Sbjct: 339 NFDEDPFVS--SILVDMYGKCGLLEHAI 364
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 2/198 (1%)
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
+ V+ A+ L K +H GY + N L++MY+KCG +++A+ +F++M
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
++L++W +ISGL+ + + + A+ F M+ GE+P F + AC +G +E G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG- 125
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+A+ + I ++ + D+ ++ G + +A + MP + D V W ++
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSK 184
Query: 477 YKNVELAELALERLTELE 494
E A LA +++ + E
Sbjct: 185 IGEFEEALLAFKKMIDEE 202
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 297/535 (55%), Gaps = 38/535 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K L + +++++ L + + +++ A A LK + ARK+FD+I ++NV+ N M Y
Sbjct: 57 KTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSY 116
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N F+R + +F M P+ +TFP VLK+C + G+++H K G + +
Sbjct: 117 VNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTL 176
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG L+ +Y GK CG + AR + + R
Sbjct: 177 FVGNGLVSMY--GK-----------------------------CGFLSEARLVLDEMSRR 205
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG--DVEECKR 249
DV+ WN++V+GY + +A ++ +M D + ++L +N +V K
Sbjct: 206 DVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 265
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M ++++ SWN +IG Y N + E ++ + M +G P+ +I +VL AC
Sbjct: 266 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADG-FEPDAVSITSVLPACGDTS 324
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL K +H Y E N+ + NALIDMYAKCG ++ A DVF +M ++D+++W +IS
Sbjct: 325 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMIS 384
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GRG A++LF +M+++G +PD I F+ L AC+H GL+EEG S F+ M Y I
Sbjct: 385 AYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 444
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P++EH CMVDLL RAG++ EA F++ MP+E + +W LLG+CRV+ N ++ LA ++
Sbjct: 445 PRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADK 504
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +L P+ +V+LSNIY GRW++V I+ M+ G KK PG S++EVN ++
Sbjct: 505 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 559
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 299/523 (57%), Gaps = 9/523 (1%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
V+ G + +I +I A + ++ AR++FD+I+ +++VSW M YA+N+
Sbjct: 72 VLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEA 131
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+ F+QM+ PN FTF VLK+C+ + G+ +HC VLK + +++VG L+EL
Sbjct: 132 LEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLEL 191
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI----LW 200
Y+ + A++ FG+M + +V+ W+ MI+ + G A +F VI +
Sbjct: 192 YTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTF 251
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
++++ D+ ++ ++ + K DV N +++ YA G +E+ LFE + +
Sbjct: 252 SSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSD 311
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN SWN +I Y G L F ML +V + T ++L ACA L AL+
Sbjct: 312 RNDVSWNTIIVSYVQLGDGERALSLFSNMLRY-QVQATEVTYSSILRACATLAALELGLQ 370
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH Y +V VGNALIDMYAKCG I++A +F+ +D +D ++WN II G +MHG
Sbjct: 371 VHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGL 430
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
G A+ +F+ MK PD +TF+G+L AC++ G ++EG YF SM DY I P +EHY
Sbjct: 431 GVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT 490
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CMV L+ R+G L +AV F++ +P E +IW LLG+C ++ +VEL ++ +R+ ELEP+
Sbjct: 491 CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPR 550
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ A+ V+LSNIY RW +VA ++ M+ G KK PG S IE
Sbjct: 551 DEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIE 593
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 204/421 (48%), Gaps = 13/421 (3%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+FD++ ++N VS+ + +GYAQ+ LF ++ N F F VLK V +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
G +H VLK G+ +N F+GTALI+ YS + A +VF E+ +++V WT MI
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 176 YISCGDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KD 227
Y A F + + + ++ + ++N + + + K +D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+ +L Y GD ++ R F +MP+ +V W+ +I +A +G + L+ F +M
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM-R 240
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
V PN T +VL A A + +LD SK +H +A G +V V NAL+ YAKCG IE
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
++++F ++ ++ ++WNTII G G ALSLF M +T+ IL AC
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+ +E GL A +I Q G ++D+ A+ G + +A F+ M D V
Sbjct: 361 TLAALELGLQVHCLTAK--TIYGQDVAVGNALIDMYAKCGSIKDA-RFMFDMLDLRDKVS 417
Query: 467 W 467
W
Sbjct: 418 W 418
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V+ + E+ Y+ ++ + A + F + +V+ W+ M + +AQ+
Sbjct: 169 VHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ 228
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ +F QM++ +PN FTF VL++ I +L + +H LK G ++FV A
Sbjct: 229 SEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNA 288
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L+ Y+ IE + ++F + +RN V W ++I Y+ GD A LF V
Sbjct: 289 LMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQAT 348
Query: 201 NTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRLFE 252
S + + A +L Q+ +DV N ++ YA G +++ + +F+
Sbjct: 349 EVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFD 408
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ R+ SWN +I GY+ +GL E + F ++ E + P++ T V VLSAC+ G LD
Sbjct: 409 MLDLRDKVSWNAIICGYSMHGLGVEAIKMFN-LMKETKCKPDELTFVGVLSACSNTGRLD 467
Query: 313 FSK 315
K
Sbjct: 468 EGK 470
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 132/272 (48%), Gaps = 13/272 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A E L+ +K +H + +GL +++ ++ A+ + + ++F+ ++D+N V
Sbjct: 259 ADIESLDLSKTIH---GHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDV 315
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN + Y Q + LF+ M + T+ +L++C + AL G ++HCL
Sbjct: 316 SWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLT 375
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
K + ++ VG ALI++Y+ +I+ A +F +D R+ V W ++I GY G V A
Sbjct: 376 AKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAI 435
Query: 187 CLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSG 237
+F L E D + + ++S + + E ++ F M + I + M+
Sbjct: 436 KMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWL 495
Query: 238 YANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
+G++++ + E++P E +V W L+G
Sbjct: 496 MGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 314/574 (54%), Gaps = 53/574 (9%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q+V +G++ +++ R++ Q + AR+MFDK++++NV SW A+ Y
Sbjct: 31 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 90
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF M P+ F FP V K+C ++ R G++++ +L GF N V
Sbjct: 91 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 150
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
++++++ ++ A + F E++ ++V +W M++GY S G+ A +F + P
Sbjct: 151 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKP 210
Query: 194 ----------------------------------ERDVILWNTIVSGYIDVRNMIEARKL 219
+ D+++ N++V Y R++ AR+
Sbjct: 211 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 270
Query: 220 FDQMPKKDVISWNTML--SGYANNGD----VEECKRL------FEEMPERNVFSWNGLIG 267
F + + D++SWN ML +G+ GD +E +R+ F E+ R+V WN +I
Sbjct: 271 FGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIIS 330
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
A +G LD + M V N T+V+ L AC++L AL K +H + G
Sbjct: 331 ACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 389
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ N+LIDMY +CG I+ + +F+ M +DL++WN +IS MHG G A++LF +
Sbjct: 390 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 449
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ G P+ ITF +L AC+H GL+EEG YF+ M +Y++ P +E Y CMVDLL+RAG+
Sbjct: 450 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQ 509
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
E ++F+++MP E +A +W +LLG+CR++ N +LAE A L ELEP++ N+V+++NI
Sbjct: 510 FNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANI 569
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
Y GRW+D A+I+ M++ G K PGCS IEV
Sbjct: 570 YSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVK 603
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 208/455 (45%), Gaps = 39/455 (8%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
+ +L+ C K+ LR G ++H ++ NG F+G+ L+E+Y +E A ++F +M
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEARK 218
ERNV WT+++ Y GD LF L D ++ + +++N +
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 219 LFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
++D M + + ++L + G ++ +R FEE+ ++VF WN ++ GY + G
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA-EYNGYQGNVCVG 333
F + L+ F++M+ EG V PN TI + +SAC L L + +H Y + ++ VG
Sbjct: 193 FKKALNVFRKMVLEG-VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI--ISGLAMHGRGAGALSLFHEMKNAG 391
N+L+D YAKC +E A F + DL++WN + ++G +G G AL F M A
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIAC 311
Query: 392 EM------PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+ D + + I+ AC G L + M + V + MV L
Sbjct: 312 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT----MVSALPAC 367
Query: 446 GRLA------EAVDFVKRMPIEADAVIWANLL---GSCRVYKNVELAELALERLTELEP- 495
+LA E F+ R ++ I +L+ G C + R+ +L P
Sbjct: 368 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS-------RRIFDLMPQ 420
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
++ ++ ++ ++YG G D + R G K
Sbjct: 421 RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 455
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 303/512 (59%), Gaps = 17/512 (3%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL--DAMP 98
I+A A+ + AR++FD + ++VVSWNA+ + H ++L +AMP
Sbjct: 22 ISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHH-----LPAARRLFDEAMP 76
Query: 99 --NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE-LYSTGKAIEAAY 155
+ ++ ++ C+ L K N+ A++ L G+A + A
Sbjct: 77 SRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKR----NVATWNAMLAGLLRLGRA-DDAD 131
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
++FGEM +RNVV +T+M++G G++ AR +F+ P+R+++ W ++SGY++ +E
Sbjct: 132 RLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVE 191
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
A KLF+ MP+K+V++ M++ Y GDVE +RLF+ + ++V SWN +I GY +NG
Sbjct: 192 ATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHG 251
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E + M EG V P+ AT++ VL+AC+ L L K H A + + NA
Sbjct: 252 EEAMRLHAVMFREG-VKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNA 310
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+ MY+KCG + + VF ++ TKD+++WNTII+ A HG+ ++LFHEM+ G +PD
Sbjct: 311 LMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPD 370
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITF+ +L AC H+G V+ L F M+ Y+I P+ EHY C+VD+L+RAG+L +A ++
Sbjct: 371 DITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYI 430
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
K MP+EA+ +W +LLG+C+++ NV+L ELA + L + + ++ +V+LSNIY G W
Sbjct: 431 KDMPLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAAGMWG 490
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEV-NEVVML 546
V +++ M++ G KK PG S E+ NEV M
Sbjct: 491 QVNQVRGQMKERGVKKQPGYSWTEIANEVHMF 522
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 57/313 (18%)
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY--ANNGDVEECKRLFE 252
R ++ N +S ++ AR++FD MP +DV+SWN +L+ A + +RLF+
Sbjct: 13 RRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARRLFD 72
Query: 253 E-MPERNVFSWNGLIGGYANNGLFFEVLDAF----KR-----------MLTEGRVFPND- 295
E MP R+V SWN +I G +G F KR +L GR D
Sbjct: 73 EAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADDADR 132
Query: 296 ----------ATIVTVLSACARLGAL-------------DFSKWVHVYAEY--NGY---- 326
+ T++ AR G + + W + + Y NG
Sbjct: 133 LFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEA 192
Query: 327 --------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ NV A+I Y K G +E+A +F+ + KD+I+WNT+I+G +G G
Sbjct: 193 TKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGE 252
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
A+ L M G PD T I +L AC+ + L+ +G S ++A+ + I +
Sbjct: 253 EAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKST-HAIAIKAMLESGISFSNAL 311
Query: 439 VDLLARAGRLAEA 451
+ + ++ G + E+
Sbjct: 312 MTMYSKCGNVGES 324
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 60/351 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL-DAMP 98
++ A+ ++ AR++FD + D+N+VSW AM +GY +N +F + KL +AMP
Sbjct: 148 MVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENG-------MFVEATKLFEAMP 200
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N+ TA+I Y +E+A ++F
Sbjct: 201 E---------------------------------KNVVACTAMITSYCKQGDVESARRLF 227
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPER-DVILWNTIVSGYIDVR 211
+ ++V+ W +MI GY+ G A L + P+ +I T S +R
Sbjct: 228 DGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLR 287
Query: 212 NMIEARKLFDQMPKKDVISW-NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ + + IS+ N +++ Y+ G+V E + +F + +++ SWN +I YA
Sbjct: 288 QGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYA 347
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNG 325
+G + +V+ F M G + P+D T ++VLSAC +G +D F YA
Sbjct: 348 QHGKYQKVIALFHEMEMTG-LIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPR 406
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C+ +D+ ++ G +E A M + + W +++ MHG
Sbjct: 407 AEHYACI----VDILSRAGQLEKASSYIKDMPLEAEKNVWGSLLGACQMHG 453
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 23 TQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHR 82
T++ + EK+ +IT+ + + AR++FD I ++V+SWN M GY N
Sbjct: 193 TKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGE 252
Query: 83 TVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
+ L M + P+ T VL +C + LR+G+ H + +K + I AL+
Sbjct: 253 EAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALM 312
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERD 196
+YS + + VF + +++V W ++I Y G LF L P D
Sbjct: 313 TMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIP--D 370
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLF 251
I + +++S V + + KLFD M K IS + ++ + G +E+
Sbjct: 371 DITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYI 430
Query: 252 EEMP---ERNVFSWNGLIGGYANNG 273
++MP E+NV W L+G +G
Sbjct: 431 KDMPLEAEKNV--WGSLLGACQMHG 453
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 127/310 (40%), Gaps = 53/310 (17%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K H I + + LE + ++T ++ + + +F + +++VSWN +
Sbjct: 286 LRQGKSTHAIAIKAM---LESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTI 342
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-- 129
YAQ+ ++ V+ LF +M+ +P+ TF VL +C + + +L L+
Sbjct: 343 IAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYA 402
Query: 130 -GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD---ERNVVVWTSMINGYISCGDIVSA 185
RA + ++++ S +E A +M E+N VW S++ G++
Sbjct: 403 ISPRAEHY--ACIVDILSRAGQLEKASSYIKDMPLEAEKN--VWGSLLGACQMHGNVQ-- 456
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
L ELA + V + Y+ + N+ YA G
Sbjct: 457 --LGELAAKMLVQSDSESSGPYVILSNI------------------------YAAAGMWG 490
Query: 246 ECKRLFEEMPERNV-----FSWNGL-------IGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+ ++ +M ER V +SW + +GG A++ +++ +++ R+
Sbjct: 491 QVNQVRGQMKERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRKIISELRKISFHMRMVT 550
Query: 294 NDATIVTVLS 303
N+A I+ L+
Sbjct: 551 NEAHIMVELA 560
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 279/483 (57%), Gaps = 9/483 (1%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVS+ ++ GY ++ + LF QM + N T+ ++L + + E +L
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFHQMPER----NHVTYTVLLGGFLDAGRVNEARKL- 165
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
++ TA++ Y I A +F EM +RNVV WT+MI+GY G ++
Sbjct: 166 ---FDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVI 222
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
AR LFE+ P+R+ + W ++ GYI ++ +A LF+ MP V + N M+ G+ +G
Sbjct: 223 LARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGM 282
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+ K +FE M R+ +W+ +I Y N E L F+ ML G + PN + +++L+
Sbjct: 283 VDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRG-IRPNYTSFISILT 341
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
CA L D+ + +H + +V +ALI MY KCG ++ A VFN + KD++
Sbjct: 342 VCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVM 401
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+G A HG G AL +F +++ A PDGIT+IG+L AC++ G V+EG F SM
Sbjct: 402 WNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMG 461
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
M+ SI HY CMVDLL RAG + EA+D + MP+E DA+IW L+G+CR++KN E+A
Sbjct: 462 MNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIA 521
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E+A ++L ELEP + +V+LS+IY GRW+D + ++ + K PGCS IE N++
Sbjct: 522 EVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKM 581
Query: 544 VML 546
V L
Sbjct: 582 VHL 584
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 168/383 (43%), Gaps = 95/383 (24%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+++ Q ++T AR +FD++ +NVVSW AM +GYAQN V+L K + MP
Sbjct: 180 MLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN----GKVIL--ARKLFEVMPD 233
Query: 99 -NCFTFPIVLKSCVKINALREGEELH----------CLVLKNGFRANIFVG--------- 138
N ++ +L ++ + + E+L C + GF + V
Sbjct: 234 RNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERM 293
Query: 139 --------TALIELYSTGKAIEAAYKVFGEMDERNVVV-WTSMINGYISCGDIVSA---- 185
+A+I++Y + + A F EM R + +TS I+ C + +A
Sbjct: 294 CARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGR 353
Query: 186 -------RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
RC F+ DV + +++ YI N+ +A+++F+ KDV+ WN+M++GY
Sbjct: 354 ELHAAMLRCSFDT----DVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGY 409
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A +G EE +F++ L R+ P+ T
Sbjct: 410 AQHGLGEEALGIFDD--------------------------------LRLARMAPDGITY 437
Query: 299 VTVLSACARLGALDFSKWVHVYAEYN--GYQGNVCVGNA----LIDMYAKCGIIENAVDV 352
+ VL+AC+ G + + + +N G ++ +G A ++D+ + G+++ A+D+
Sbjct: 438 IGVLTACSYTGKVKEGREI-----FNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDL 492
Query: 353 FNSMDTK-DLITWNTIISGLAMH 374
N+M + D I W ++ MH
Sbjct: 493 INNMPVEPDAIIWGALMGACRMH 515
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 165/397 (41%), Gaps = 58/397 (14%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI----SCGDIVSARCLFELAPER 195
ALI Y +AA +F M R++ + ++I G + D +A L P
Sbjct: 53 ALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPS- 111
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V+ + +++ GY+ + +A +LF QMP+++ +++ +L G+ + G V E ++LF+EMP
Sbjct: 112 -VVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMP 170
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS- 314
+++V + ++ GY G E F M N + ++S A+ G + +
Sbjct: 171 DKDVVARTAMLSGYCQAGRITEARALFDEMPKR-----NVVSWTAMISGYAQNGKVILAR 225
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
K V + N A++ Y + G +E+A D+FN+M + N ++ G H
Sbjct: 226 KLFEVMPDRNEVS-----WTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQH 280
Query: 375 G--------------RGAG-----------------ALSLFHEMKNAGEMPDGITFIGIL 403
G R G ALS F EM G P+ +FI IL
Sbjct: 281 GMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISIL 340
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
C + + G +M + S + ++ + + G L +A V M D
Sbjct: 341 TVCAALATADYGRELHAAM-LRCSFDTDVFAVSALITMYIKCGNLDKA-KRVFNMFEPKD 398
Query: 464 AVIWANLLGSCRVYKNVELAELALE-----RLTELEP 495
V+W +++ Y L E AL RL + P
Sbjct: 399 VVMWNSMITG---YAQHGLGEEALGIFDDLRLARMAP 432
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 15/259 (5%)
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
VV + I + G+I AR F+ P R +N +++GY A LF +MP
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 226 KDVISWNTMLSGYA-NNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFK 283
+D+ S+N +++G + + + +P +V S+ L+ GY +GL + + F
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
+M N T +L G ++ ++ ++ E +V A++ Y +
Sbjct: 137 QMPER-----NHVTYTVLLGGFLDAGRVNEAR--KLFDEMP--DKDVVARTAMLSGYCQA 187
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G I A +F+ M +++++W +ISG A +G+ A LF M + E +++ +L
Sbjct: 188 GRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNE----VSWTAML 243
Query: 404 CACTHMGLVEEGLSYFQSM 422
G VE+ F +M
Sbjct: 244 VGYIQAGHVEDAEDLFNAM 262
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 28/253 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L T + ++ ++ + + +IT + + A+++F+ ++VV WN+M
Sbjct: 346 LATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSM 405
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GYAQ+ + +F ++ P+ T+ VL +C ++EG E+ + G
Sbjct: 406 ITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSM---GM 462
Query: 132 RANIFVGTA----LIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI-------NGYISC 179
++I +G A +++L ++ A + M E + ++W +++ N I+
Sbjct: 463 NSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIA- 521
Query: 180 GDIVSARCLFELAPERD---VILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISW 231
V+A+ L EL P V+L + S D+R I +R L ++ P I +
Sbjct: 522 --EVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNL-NKSPGCSWIEY 578
Query: 232 NTMLSGYANNGDV 244
N M+ + +GDV
Sbjct: 579 NKMVHLF-TSGDV 590
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 301/542 (55%), Gaps = 22/542 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE- 79
I + +GL+ +++ ++ + + A +F + +++V+WNAM GYA +
Sbjct: 32 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 91
Query: 80 FHRTVVVLFT-QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---- 134
+H V L + QM+ PN T +L + AL +G +H ++ N
Sbjct: 92 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151
Query: 135 ------IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ +GTAL+++Y+ ++ A +VF M RN V W+++I G++ C + A L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211
Query: 189 FE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + L T ++ + ++ ++ +Q+ D+ + N++LS YA
Sbjct: 212 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA 271
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G +++ LF+EM ++ S++ L+ GY NG E FK+M V P+ AT+V
Sbjct: 272 KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMV 330
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+++ AC+ L AL + H G + NALIDMYAKCG I+ + VFN M ++
Sbjct: 331 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 390
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+++WNT+I+G +HG G A +LF EM N G PDG+TFI +L AC+H GLV EG +F
Sbjct: 391 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 450
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y + P++EHY CMVDLL+R G L EA +F++ MP+ AD +W LLG+CRVYKN
Sbjct: 451 HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 510
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++L + + EL P+ NFV+LSNIY GR+ + A +++ + GFKK PGCS IE
Sbjct: 511 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIE 570
Query: 540 VN 541
+N
Sbjct: 571 IN 572
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 25/429 (5%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
PN +TFP LK+C + G +H + G +A++FV TAL+++Y + A +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 158 FGEMDERNVVVWTSMINGYISCG---------------------DIVSARCLFELAPERD 196
F M R++V W +M+ GY G + + L L ++
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ T V Y +R + + V+ +L YA G + +R+F+ MP
Sbjct: 128 ALAQGTSVHAYC-IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN +W+ LIGG+ + FK ML +G F + +I + L ACA L L +
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 246
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H +G ++ GN+L+ MYAK G+I+ A+ +F+ M KD ++++ ++SG +GR
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
A +F +M+ PD T + ++ AC+H+ ++ G S+ + + +
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICN 365
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK-NVELAELALERLTELEP 495
++D+ A+ GR+ + MP D V W ++ ++ E L LE P
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424
Query: 496 KNPANFVML 504
+ F+ L
Sbjct: 425 PDGVTFICL 433
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ +++ A+ + A +FD++ ++ VS++A+ +GY QN
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G H V+ G + +
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI++Y+ I+ + +VF M R++V W +MI GY G A LF L
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECK 248
D + + ++S +IE + F M P+ + + M+ + G ++E
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME--HYICMVDLLSRGGFLDEAY 483
Query: 249 RLFEEMPER-NVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEG 289
+ MP R +V W L+G Y N L +V + + EG
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
RV PN+ T L AC+ L + +H +A + G Q ++ V AL+DMY KC + +A
Sbjct: 5 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 64
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHG--RGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
+F +M +DL+ WN +++G A HG A A L +M+ P+ T + +L
Sbjct: 65 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYG----------CMVDLLARAGRLAEAVDFVKR 457
G + +G S + + + P ++D+ A+ G L A
Sbjct: 125 QQGALAQGTS-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183
Query: 458 MPIEADAVIWANLLG 472
MP + V W+ L+G
Sbjct: 184 MPAR-NEVTWSALIG 197
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 301/542 (55%), Gaps = 22/542 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE- 79
I + +GL+ +++ ++ + + A +F + +++V+WNAM GYA +
Sbjct: 147 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 206
Query: 80 FHRTVVVLFT-QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---- 134
+H V L + QM+ PN T +L + AL +G +H ++ N
Sbjct: 207 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 266
Query: 135 ------IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ +GTAL+++Y+ ++ A +VF M RN V W+++I G++ C + A L
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326
Query: 189 FE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + L T ++ + ++ ++ +Q+ D+ + N++LS YA
Sbjct: 327 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA 386
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G +++ LF+EM ++ S++ L+ GY NG E FK+M V P+ AT+V
Sbjct: 387 KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMV 445
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+++ AC+ L AL + H G + NALIDMYAKCG I+ + VFN M ++
Sbjct: 446 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 505
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+++WNT+I+G +HG G A +LF EM N G PDG+TFI +L AC+H GLV EG +F
Sbjct: 506 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 565
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y + P++EHY CMVDLL+R G L EA +F++ MP+ AD +W LLG+CRVYKN
Sbjct: 566 HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 625
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++L + + EL P+ NFV+LSNIY GR+ + A +++ + GFKK PGCS IE
Sbjct: 626 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIE 685
Query: 540 VN 541
+N
Sbjct: 686 IN 687
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 206/447 (46%), Gaps = 26/447 (5%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV--VVLFTQMKKLDAMPNCFTFPIV 106
++ A +FD+I +V ++N + Y+ + + L+ +M + PN +TFP
Sbjct: 72 HLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFA 131
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
LK+C + G +H + G +A++FV TAL+++Y + A +F M R++
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 167 VVWTSMINGYISCG---------------------DIVSARCLFELAPERDVILWNTIVS 205
V W +M+ GY G + + L L ++ + T V
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
Y +R + + V+ +L YA G + +R+F+ MP RN +W+ L
Sbjct: 252 AYC-IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
IGG+ + FK ML +G F + +I + L ACA L L + +H +G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
++ GN+L+ MYAK G+I+ A+ +F+ M KD ++++ ++SG +GR A +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+M+ PD T + ++ AC+H+ ++ G S+ + + + ++D+ A+
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKC 489
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLG 472
GR+ + MP D V W ++
Sbjct: 490 GRIDLSRQVFNMMP-SRDIVSWNTMIA 515
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 17/246 (6%)
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNG--LFFEVLDAFKRMLTEGRVFPNDATI 298
+G + LF+++P +V ++N LI Y+++ + L ++RML RV PN+ T
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRH-RVAPNNYTF 128
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
L AC+ L + +H +A + G Q ++ V AL+DMY KC + +A +F +M
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 359 KDLITWNTIISGLAMHG--RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+DL+ WN +++G A HG A A L +M+ P+ T + +L G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 417 SYFQSMAMDYSIVPQIEHYG----------CMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
S + + + P ++D+ A+ G L A MP + V
Sbjct: 249 S-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVT 306
Query: 467 WANLLG 472
W+ L+G
Sbjct: 307 WSALIG 312
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ +++ A+ + A +FD++ ++ VS++A+ +GY QN
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G H V+ G + +
Sbjct: 421 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 480
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI++Y+ I+ + +VF M R++V W +MI GY G A LF L
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 540
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECK 248
D + + ++S +IE + F M P+ + + M+ + G ++E
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME--HYICMVDLLSRGGFLDEAY 598
Query: 249 RLFEEMPER-NVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEG 289
+ MP R +V W L+G Y N L +V + + EG
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 291/507 (57%), Gaps = 41/507 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ +LK++ A ++F+ + +NVVSWN M +GY +N + +F +M +
Sbjct: 44 MLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHE------ 97
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ V NA+ + L G+ +E A + F
Sbjct: 98 --------RNMVSWNAV------------------------IAALVQCGR-VEEARRRFD 124
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
EM +R+V+ WT+M+ G G + AR +F+ PER+V+ WN +V+GY + EA L
Sbjct: 125 EMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDL 184
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F++MP++++ SWNTM++G+ NG++ +++F EMPE+NV SW +I GY G L
Sbjct: 185 FERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESAL 244
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F M+ +G PN+ T V VL AC+ + L + VH+ + YQ V +AL++M
Sbjct: 245 KVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNM 304
Query: 340 YAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
Y+KCG + A +F+ + +DL+ WN +I+ A HG G A+ LF +M+ G P+ +
Sbjct: 305 YSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDV 364
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
+++ +L AC+H GLV+EGL+YF + D SI + +H+ C+VDL RAGRL EA DF+K+
Sbjct: 365 SYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQ 424
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
+ +A + IW LL C + ++E+ +LA + L + +P+N +++LSNIY +W++
Sbjct: 425 LGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRKWREA 484
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+R+++ M++ G KK PGCS IEV V
Sbjct: 485 SRVRLKMKEKGLKKQPGCSWIEVGNRV 511
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 175/352 (49%), Gaps = 54/352 (15%)
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWNTIVSGYIDVRNMIEARKL 219
M ER+VV WT++I+GYI CG IV AR LF+ +DV+ W ++SGY+ ++ + EA +L
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 220 FDQMPKKDVISWNTMLSGYANN-------------------------------GDVEECK 248
F+ MP K+V+SWNTM+ GY N G VEE +
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
R F+EMP+R+V SW ++ G A +G E F RM V N +VT + RL
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWN--AMVTGYAKNMRL 178
Query: 309 G-ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
A D + + + N+ N +I + + G + A VFN M K++++W T+
Sbjct: 179 DEAFDLFERMP--------ERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTM 230
Query: 368 ISGLAMHGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEG----LSYFQSM 422
I+G G AL +F EM K+ G P+ TF+ +L AC+ M + EG L +S+
Sbjct: 231 ITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSV 290
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI-EADAVIWANLLGS 473
D + V ++++ ++ G L+ A + I + D V+W ++ +
Sbjct: 291 YQDRTFVAS-----ALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAA 337
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 158/362 (43%), Gaps = 58/362 (16%)
Query: 30 LEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+ K D I+ ++ A+ ++ ARK+FD++ ++NVVSWNAM GYA+N LF
Sbjct: 126 MPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLF 185
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+M + N+ +I +
Sbjct: 186 ERMPE---------------------------------------RNLSSWNTMITGFIQN 206
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-------ELAPERDVILWN 201
+ A KVF EM E+NVV WT+MI GY+ G+ SA +F P +
Sbjct: 207 GELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFV-- 264
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEE--MP 255
++ D+ + E +++ + K + +L+ Y+ G++ +++F++ +
Sbjct: 265 NVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVIS 324
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS- 314
+R++ WNG+I YA++G E ++ F+ M G PND + V +LSAC+ G +D
Sbjct: 325 QRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLG-FKPNDVSYVELLSACSHAGLVDEGL 383
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAM 373
+ N Q L+D+ + G ++ A D + TK + W +++G
Sbjct: 384 NYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNA 443
Query: 374 HG 375
HG
Sbjct: 444 HG 445
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYA 76
Q+ + S + ++ ++ ++ +++ ARK+FD I+ +++V WN M YA
Sbjct: 280 QQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYA 339
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRANI 135
+ + LF M+ L PN ++ +L +C + EG L N +
Sbjct: 340 HHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLRE 399
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDI----VSARCLFE 190
L++L ++ AY ++ + + +W ++ G + GD+ ++A+ L +
Sbjct: 400 DHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEK 459
Query: 191 LAPERD---VILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
PE ++L N SG R EA ++ +M +K
Sbjct: 460 EDPENAGTYLLLSNIYASG----RKWREASRVRLKMKEK 494
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 294/508 (57%), Gaps = 12/508 (2%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-- 98
ITA A+ + AR++FD + ++ VSWNA+ R L D MP
Sbjct: 23 ITALARAGDVAAARRVFDAMPRRDAVSWNALLTA-----LWRAGRDLPAARSLFDDMPSR 77
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N ++ ++ C+ L R N+ A++ ++E A +F
Sbjct: 78 NVISWNSIIAGCLAHGDLAAASA----YFARAPRRNVASWNAMLAGLVRLGSMEDARSLF 133
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
+M ERNVV +T+M++G CG++ SAR LF+ P R+++ W ++SGY+D + EARK
Sbjct: 134 DQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARK 193
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LF+ MP+K+V++ M++GY GD++ +RLF+ + ++V SWN +I GY +NGL E
Sbjct: 194 LFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEA 253
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+ ML EG + P+ AT++ +L+AC+ L L + H + ++ + NAL+
Sbjct: 254 TKLYIIMLREG-IKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMT 312
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY+KCG ++ + VF S+ ++D+++WNTII+ A HGR ++LFHEM+ G +P+ IT
Sbjct: 313 MYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDIT 372
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC H G V+E L F M Y+I P+ EHY C+VD+L+RAG+L +A ++K M
Sbjct: 373 FLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEM 432
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P EA+ +W LL + + + NV+L ELA + L + ++ +VMLSNIY G W +V
Sbjct: 433 PSEAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVN 492
Query: 519 RIKVAMRDTGFKKLPGCSSIEVNEVVML 546
R++ M++ G KK PG S E+ + V +
Sbjct: 493 RVRSQMKEKGVKKQPGHSWTEIADKVHM 520
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 160/381 (41%), Gaps = 89/381 (23%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ +L M AR +FD++ ++NVVS+ M +G A+ + LF DAMP
Sbjct: 116 MLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELF------DAMPT 169
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
N+ A+I Y +E A K+F
Sbjct: 170 ---------------------------------RNLVSWAAMISGYVDNNMLEEARKLFE 196
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M E+NVV T+MI GY GD+ +AR LF+ +DVI WN I+SGY+ EA KL
Sbjct: 197 AMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKL 256
Query: 220 F----------DQ-----------------------------MPKKDVISWNTMLSGYAN 240
+ DQ M + + N +++ Y+
Sbjct: 257 YIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSK 316
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G+V+E + +F + +++ SWN +I YA +G + +V+ F M G + PND T ++
Sbjct: 317 CGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCG-LIPNDITFLS 375
Query: 301 VLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
+LSAC G +D F YA + C+ +D+ ++ G +E A
Sbjct: 376 MLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACI----VDILSRAGQLEKACSYIKE 431
Query: 356 MDTK-DLITWNTIISGLAMHG 375
M ++ + W T++ HG
Sbjct: 432 MPSEAEKNVWGTLLCASQTHG 452
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 54/281 (19%)
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG-DVEECKR 249
LA R ++ N ++ ++ AR++FD MP++D +SWN +L+ G D+ +
Sbjct: 10 LASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARS 69
Query: 250 LFEEMPERNVFSWNGLIGGYANNG------------------LFFEVLDAFKRM--LTEG 289
LF++MP RNV SWN +I G +G + +L R+ + +
Sbjct: 70 LFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDA 129
Query: 290 RVF------PNDATIVTVLSACARLG----------ALDFSKWVHVYAEYNGY------- 326
R N + T++ AR G A+ V A +GY
Sbjct: 130 RSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLE 189
Query: 327 ----------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+ NV A+I Y K G ++NA +F+ + KD+I+WN IISG +G
Sbjct: 190 EARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGL 249
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
G A L+ M G PD T I +L AC+ + L+ +G S
Sbjct: 250 GEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRS 290
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ +IT + + AR++FD I ++V+SWNA+ +GY N L+
Sbjct: 200 EKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYII 259
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + P+ T +L +C + LR+G H +V+K ++I + AL+ +YS
Sbjct: 260 MLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGN 319
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIV 204
++ + VF + +++V W ++I Y G LF L P + I + +++
Sbjct: 320 VDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIP--NDITFLSML 377
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP---E 256
S + E+ KLFD M K IS + ++ + G +E+ +EMP E
Sbjct: 378 SACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAE 437
Query: 257 RNVFSWNGLIGGYANNG 273
+NV W L+ +G
Sbjct: 438 KNV--WGTLLCASQTHG 452
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
V+ + LE S I ++T ++ + + +F + Q++VSWN + YAQ+ ++ V
Sbjct: 295 VIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKV 354
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN---GFRANIFVGTAL 141
+ LF +M+ +PN TF +L +C + E +L L+ RA + +
Sbjct: 355 IALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHY--ACI 412
Query: 142 IELYSTGKAIEAAYKVFGEMD---ERNV---VVWTSMINGYISCGDIVS 184
+++ S +E A EM E+NV ++ S +G + G++ +
Sbjct: 413 VDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAA 461
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 289/564 (51%), Gaps = 79/564 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G + Y+ +I A M ARK+FD+ + VSWN++ GY +
Sbjct: 162 EIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKG 221
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F QM + NI
Sbjct: 222 DVEEAKLIFDQMPQ---------------------------------------RNIVASN 242
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---------- 189
++I L + A+K+F EMDE+++V W+++I+GY G A +F
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 302
Query: 190 -----------------------------ELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+ E V L N ++ Y +++A+KLF
Sbjct: 303 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF 362
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ D ISWN+M+SG G VE+ + LF+ MPE+++ SW+ +I GYA + F E L
Sbjct: 363 NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLA 422
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F M G++ P++ +V+V+SAC L ALD KWVH Y NG + NV +G L+DMY
Sbjct: 423 LFHEMQL-GQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMY 481
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
KCG +ENA++VFN M+ K + +WN +I GLA++G +L +F EMKN G +P+ ITF+
Sbjct: 482 MKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFM 541
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
G+L AC HMGLV+EG +F SM + I P ++HYGCMVDLL RAG L EA ++ MP+
Sbjct: 542 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 601
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
D W LLG+C+ + + E+ E +L EL+P + V+LSNI+ G W+DV +
Sbjct: 602 APDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV 661
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVV 544
+ M+ G K PGCS IE N VV
Sbjct: 662 RGMMKQQGVVKTPGCSLIEANGVV 685
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 214/441 (48%), Gaps = 65/441 (14%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNV 65
H K ++I +Q++ +G + R++ + + + Y+ ++FD+I + N
Sbjct: 47 HLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNG 106
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN M Y Q+ ++L+ M K + P+ +T+P+V+++C G+E+H
Sbjct: 107 FMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDH 166
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
VLK GF ++++V LI +Y+ + A K+F E + V W S++ GY+ GD+ A
Sbjct: 167 VLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEA 226
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+ +F+ P+R+++ N+++ + ++EA KLF++M +KD++SW+ ++SGY NG E
Sbjct: 227 KLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYE 286
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E +F EM NG+ + + +V+VLSAC
Sbjct: 287 EALVMFIEMNA---------------NGMRLD-----------------EVVVVSVLSAC 314
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA------------------------ 341
A L + K +H G + V + NALI MY+
Sbjct: 315 AHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWN 374
Query: 342 -------KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
KCG +E A +F+ M KD+++W+ +ISG A H + L+LFHEM+ P
Sbjct: 375 SMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRP 434
Query: 395 DGITFIGILCACTHMGLVEEG 415
D + ++ ACTH+ +++G
Sbjct: 435 DETILVSVISACTHLAALDQG 455
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 44/308 (14%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH ++T K +H + V+ G+E + +I + ++ A+K+F+ + + +
Sbjct: 315 AHLSIVKTGKMIHGL---VIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQI 371
Query: 67 SWNAM-------------------------------FNGYAQNEFHRTVVVLFTQMKKLD 95
SWN+M +GYAQ++ + LF +M+
Sbjct: 372 SWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ 431
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
P+ V+ +C + AL +G+ +H + KNG + N+ +GT L+++Y +E A
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENAL 491
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV-RNM- 213
+VF M+E+ V W ++I G G + + +F VI G + R+M
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 551
Query: 214 --IEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
E R F M +K +V + M+ G + E ++L E MP +V +W L
Sbjct: 552 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL 611
Query: 266 IGGYANNG 273
+G +G
Sbjct: 612 LGACKKHG 619
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 34/306 (11%)
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV----FSWNGLIGGYANNG 273
++FD++ + WNTM+ Y + E+ L++ M + NV +++ ++ A
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155
Query: 274 LFF---EVLDAFKRMLTEGRVFPNDATIVTVLSACARL----------GALDFSKWVHVY 320
L F E+ D ++ + V+ + T++ + + C + LD W +
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQN-TLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214
Query: 321 AEY--------------NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
A Y Q N+ N++I + K G + A +FN MD KD+++W+
Sbjct: 215 AGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSA 274
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISG +G AL +F EM G D + + +L AC H+ +V+ G + +
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG-KMIHGLVIRM 333
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I + ++ + + +G + +A D + W +++ C +VE A
Sbjct: 334 GIESYVNLQNALIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVEKARAL 392
Query: 487 LERLTE 492
+ + E
Sbjct: 393 FDVMPE 398
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/549 (35%), Positives = 311/549 (56%), Gaps = 13/549 (2%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H E LE K +H +V GL+ Y+ +++ + M A ++F+ + +NVVS
Sbjct: 318 HPEALEQGKRVHARMKEV---GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVS 374
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W AM G+AQ+ + F +M + PN TF +L +C + +AL++G ++H ++
Sbjct: 375 WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G+ + V TAL+ +Y+ ++ A VF + ++NVV W +MI Y+ +A
Sbjct: 435 KAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVA 494
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + ++ + ++V +A +L + + D+ N ++S +
Sbjct: 495 TFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFV 554
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
N GD+ LF +MPER++ SWN +I G+ +G D FK M+ E V P+ T
Sbjct: 555 NCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFK-MMQESGVKPDQITFT 613
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+L+ACA AL + +H +V VG LI MY KCG I++A VF+++ K
Sbjct: 614 GLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK 673
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
++ +W ++I+G A HGRG AL LF +M+ G PD ITF+G L AC H GL++EGL +F
Sbjct: 674 NVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHF 733
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+SM D++I P++EHYGCMVDL RAG L EAV+F+ +M ++ D+ +W LLG+C+V+ +
Sbjct: 734 ESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLD 792
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
VELAE ++ EL+P + +V+LSNIY G WK+V +++ M D G K PG S IE
Sbjct: 793 VELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIE 852
Query: 540 VNEVVMLGC 548
V+ V + C
Sbjct: 853 VDGRVHIFC 861
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 222/461 (48%), Gaps = 11/461 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + S ++ ++ +I+ A+ A+++FD++ D++V SWN + GY Q+
Sbjct: 125 RIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHR 184
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L QM + P+ +TF +L +C + +G EL L+L G+ ++FVGT
Sbjct: 185 RYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT 244
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
ALI ++ ++ A KVF + R+++ WTSMI G A LF++ E
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
D + + +++ + + +++ +M + ++ +LS Y G +E+ +F
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ RNV SW +I G+A +G E F +M+ G + PN T +++L AC+R AL
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG-IEPNRVTFMSILGACSRPSAL 423
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ +H GY + V AL+ MYAKCG + +A +VF + ++++ WN +I+
Sbjct: 424 KQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAY 483
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
H + A++ F + G PD TF IL C +E G + QS+ +
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESD 542
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ +V + G L A++ MP E D V W ++
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIA 582
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 215/430 (50%), Gaps = 23/430 (5%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ +L+ C+K L +GE +H + + + +IF+ LI +Y+ +A ++F EM
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIE 215
+++V W ++ GY+ A L E + P++ ++ +++ D +N+ +
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVY--MLNACADAKNVDK 223
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+LF + D+ +++ + G V++ ++F +P R++ +W +I G A
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ F + + F+ M EG V P+ V++L AC AL+ K VH + G +
Sbjct: 284 HRQFKQACNLFQVMEEEG-VQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIY 342
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG AL+ MY KCG +E+A++VFN + +++++W +I+G A HGR A F++M +G
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF+ IL AC+ +++G + + + ++ + A+ G L +A
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRI-IKAGYITDDRVRTALLSMYAKCGSLMDA 461
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSNIYG 509
+ +R+ + + V W ++ + ++ + A + L + ++P + + F + N+
Sbjct: 462 RNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCK 519
Query: 510 -----DLGRW 514
+LG+W
Sbjct: 520 SPDALELGKW 529
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 295/545 (54%), Gaps = 20/545 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSW 68
+Q +TK L QI TQ + K +++ + I+ LK TY+ +F IT N ++
Sbjct: 29 KQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSIS----LKDFTYSTLIFSHITPHPNDYAF 84
Query: 69 NAMFNGYAQNEFHRTVVV-LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N M + + L+ QMK L+ PN FTFP V +C + +R HC V
Sbjct: 85 NIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVF 144
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G + +++ +Y A KVF E+ E+++V W S+++GY G A
Sbjct: 145 KLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVE 204
Query: 188 LF-----ELAPERDVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
+F E E D + +++ G +++ +E + M I + ++S
Sbjct: 205 VFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG-SALISM 263
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G++ +R+F+ MP R+ +WN I YA NG+ E + F M G V PN T
Sbjct: 264 YSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG-VDPNKVT 322
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ VLSACA +GALD K + YA + G Q ++ V ALIDMYAKCG +E+A VFN M
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG--EMPDGITFIGILCACTHMGLVEEG 415
K+ +WN +IS LA HG+ ALSLF M + G P+ ITF+ +L AC H GLV+EG
Sbjct: 383 RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
F M+ + +VP+IEHY CMVDLL+RAG L EA D +++MP + D V L +C+
Sbjct: 443 YRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQ 502
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
KNV++ E ++ L EL+P N N+++ S IY +L W D AR++ MR+ G K PGC
Sbjct: 503 RKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGC 562
Query: 536 SSIEV 540
S IEV
Sbjct: 563 SWIEV 567
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 300/537 (55%), Gaps = 16/537 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQN 78
I T GL Y++ ++ A+ + A+ +F+ I+ D+++V+WNAM ++ +
Sbjct: 129 IHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFH 188
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
H + QM++ PN T +L + + NAL +G+ +H ++N F N+ +
Sbjct: 189 ALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQ 248
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR-------CLFEL 191
TAL+++Y+ + A K+F ++++N V W++MI GY+ I A C++ L
Sbjct: 249 TALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGL 308
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEEC 247
P + T++ + ++ +KL M K D N+++S YA G ++
Sbjct: 309 NPTPATL--ATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNA 366
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+EM ++ S++ +I G NG + L F++M + G + P T++ +L AC+
Sbjct: 367 VGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG-IAPYLETMIALLPACSH 425
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L AL H Y G+ + + NA+IDMY+KCG I + ++F+ M +D+I+WNT+
Sbjct: 426 LAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTM 485
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I G +HG ALSLF E++ G PD +T I +L AC+H GLV EG +F SM+ +++
Sbjct: 486 IIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFN 545
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P++ HY CMVDLLARAG L EA F++RMP + IW LL +CR +KN+E+ E
Sbjct: 546 IKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVS 605
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++ L P+ NFV++SNIY +GRW D A I+ R G+KK PGCS +E++ V+
Sbjct: 606 KKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVI 662
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 213/449 (47%), Gaps = 44/449 (9%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
++ AR +FD+I +VV WN M YA + + + L+ M +L P FTFP +LK
Sbjct: 56 EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM--DERNV 166
+C + AL+ G +H G +++V TAL+ +Y+ + A +F + +R++
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 167 VVWTSMINGYI----------------SCGDIVSARCLFELAP---ERDVILWNTIVSGY 207
V W +MI + G ++ L + P + + + + Y
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY 235
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+RN FD +V+ +L YA + +++F + ++N W+ +IG
Sbjct: 236 Y-IRNF-----FFD-----NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIG 284
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GY + + L + ML + P AT+ T+L ACA+L L K +H + +G
Sbjct: 285 GYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMD 344
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ VGN+LI MYAKCGI++NAV + M KD ++++ IISG +G AL +F +M
Sbjct: 345 LDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQM 404
Query: 388 KNAGEMPDGITFIGILCACTHMGLVE-----EGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
+++G P T I +L AC+H+ ++ G + + D SI I +D+
Sbjct: 405 QSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAI------IDMY 458
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++ G++ + + RM D + W ++
Sbjct: 459 SKCGKITISREIFDRMQ-NRDIISWNTMI 486
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 233 TMLSGYA-NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
T L+ Y + +++ + +F+++P+ +V WN +I YA +G F + + + ML G V
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG-V 103
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P + T +L AC+ L AL + +H +A G ++ V AL+ MYAKCG + A
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 352 VFNSM--DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+FNS+ +D++ WN +I+ + H A + +M+ AG P+ T + IL
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 410 GLVEEG 415
+ +G
Sbjct: 224 NALHQG 229
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 10/268 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL K ++ ++ SG++ + +I+ A+ M A D++ ++ VS++A
Sbjct: 324 QLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSA 383
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ +G QN + +++F QM+ P T +L +C + AL+ G H + G
Sbjct: 384 IISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRG 443
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F + + A+I++YS I + ++F M R+++ W +MI GY G V A LF+
Sbjct: 444 FTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQ 503
Query: 191 ----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGYANN 241
L + D + ++S + E + F M K + + M+ A
Sbjct: 504 ELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARA 563
Query: 242 GDVEECKRLFEEMP-ERNVFSWNGLIGG 268
G+++E + MP NV W L+
Sbjct: 564 GNLDEAYTFIQRMPFVPNVRIWGALLAA 591
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 295/545 (54%), Gaps = 20/545 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSW 68
+Q +TK L QI TQ + K +++ + I+ LK TY+ +F IT N ++
Sbjct: 29 KQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSIS----LKDFTYSTLIFSHITPHPNDYAF 84
Query: 69 NAMFNGYAQNEFHRTVVV-LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N M + + L+ QMK L+ PN FTFP V +C + +R HC V
Sbjct: 85 NIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVF 144
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G + +++ +Y A KVF E+ E+++V W S+++GY G A
Sbjct: 145 KLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVE 204
Query: 188 LF-----ELAPERDVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
+F E E D + +++ G +++ +E + M I + ++S
Sbjct: 205 VFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG-SALISM 263
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G++ +R+F+ MP R+ +WN I YA NG+ E + F M G V PN T
Sbjct: 264 YSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG-VDPNKVT 322
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ VLSACA +GALD K + YA + G Q ++ V ALIDMYAKCG +E+A VFN M
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG--EMPDGITFIGILCACTHMGLVEEG 415
K+ +WN +IS LA HG+ ALSLF M + G P+ ITF+ +L AC H GLV+EG
Sbjct: 383 RKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
F M+ + +VP+IEHY CMVDLL+RAG L EA D +++MP + D V L +C+
Sbjct: 443 YRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQ 502
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
KNV++ E ++ L EL+P N N+++ S IY +L W D AR++ MR+ G K PGC
Sbjct: 503 RKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGC 562
Query: 536 SSIEV 540
S IEV
Sbjct: 563 SWIEV 567
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 301/542 (55%), Gaps = 22/542 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE- 79
I + +GL+ +++ ++ + + A +F + +++V+WNAM GYA +
Sbjct: 32 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 91
Query: 80 FHRTVVVLFT-QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---- 134
+H V L + QM+ PN T +L + AL +G +H ++ N
Sbjct: 92 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151
Query: 135 ------IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ +GTAL+++Y+ ++ A +VF M RN V W+++I G++ C + A L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211
Query: 189 FE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + L T ++ + ++ ++ +Q+ D+ + N++LS YA
Sbjct: 212 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA 271
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G +++ LF+EM ++ S++ L+ GY NG E FK+M V P+ AT+V
Sbjct: 272 KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMV 330
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+++ AC+ L AL + H G + NALIDMYAKCG I+ + VFN M ++
Sbjct: 331 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 390
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+++WNT+I+G +HG G A +LF EM N G PDG+TFI +L AC+H GLV EG +F
Sbjct: 391 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 450
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y + P++EHY CMVDLL+R G L EA +F++ MP+ AD +W LLG+CRVYKN
Sbjct: 451 HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 510
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++L + + EL P+ NFV+LSNIY GR+ + A +++ + GFKK PGCS IE
Sbjct: 511 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIE 570
Query: 540 VN 541
+N
Sbjct: 571 IN 572
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 25/429 (5%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
PN +TFP LK+C + G +H + G +A++FV TAL+++Y + A +
Sbjct: 8 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67
Query: 158 FGEMDERNVVVWTSMINGYISCG---------------------DIVSARCLFELAPERD 196
F M R++V W +M+ GY G + + L L ++
Sbjct: 68 FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ T V Y +R + + V+ +L YA G + +R+F+ MP
Sbjct: 128 ALAQGTSVHAYC-IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN +W+ LIGG+ + FK ML +G F + +I + L ACA L L +
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 246
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H +G ++ GN+L+ MYAK G+I+ A+ +F+ M KD ++++ ++SG +GR
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
A +F +M+ PD T + ++ AC+H+ ++ G S+ + + +
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICN 365
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK-NVELAELALERLTELEP 495
++D+ A+ GR+ + MP D V W ++ ++ E L LE P
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424
Query: 496 KNPANFVML 504
+ F+ L
Sbjct: 425 PDGVTFICL 433
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ +++ A+ + A +FD++ ++ VS++A+ +GY QN
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G H V+ G + +
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI++Y+ I+ + +VF M R++V W +MI GY G A LF L
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECK 248
D + + ++S +IE + F M P+ + + M+ + G ++E
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME--HYICMVDLLSRGGFLDEAY 483
Query: 249 RLFEEMPER-NVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEG 289
+ MP R +V W L+G Y N L +V + + EG
Sbjct: 484 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 14/195 (7%)
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
RV PN+ T L AC+ L + +H +A + G Q ++ V AL+DMY KC + +A
Sbjct: 5 RVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDA 64
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHG--RGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
+F +M +DL+ WN +++G A HG A A L +M+ P+ T + +L
Sbjct: 65 AHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 124
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYG----------CMVDLLARAGRLAEAVDFVKR 457
G + +G S + + + P ++D+ A+ G L A
Sbjct: 125 QQGALAQGTS-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183
Query: 458 MPIEADAVIWANLLG 472
MP + V W+ L+G
Sbjct: 184 MPAR-NEVTWSALIG 197
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 295/527 (55%), Gaps = 61/527 (11%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
M+D H++ ++T QI+ + + L + +A + + + YARK+F +
Sbjct: 1 MQDLKQLHAQMIKTA----QIRDPLAAAELLR--------FSAVSDHRDLDYARKIFRSM 48
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREG 119
N S+N + +++ +++F +M + PNCFTFP V K+C + LREG
Sbjct: 49 HRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREG 108
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
++H L +K G ++ FV + ++ +Y +SC
Sbjct: 109 RQVHGLAVKFGLDSDEFVVSNVVRMY-------------------------------LSC 137
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G + A LF V G +R+ + R++ DV+ WN M+ GY
Sbjct: 138 GVMEDAHRLF---------YRRVFVDGCDGIRD--KKRRV-----DGDVVLWNVMIDGYV 181
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G++E + LF+EMP+R+V SWN +I GYA +G F E ++ F+ M V PN T+V
Sbjct: 182 RIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQM-AEVPPNYVTLV 240
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+VL A +RLGAL+ KWVH+YA N + +G+ALIDMYAKCG IE A+ VF + +
Sbjct: 241 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 300
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+++TW+TII+GLAMHGR L F +M+ AG MP +T+IG+L AC+H GLV EG +F
Sbjct: 301 NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 360
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M + P+IEHYGCMVDLL RAG L E+ + + MPI+ D VIW LLG+C+++ N
Sbjct: 361 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGN 420
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
VE+ + E L EL P + ++V LSNIY LG W+ VA++++ M++
Sbjct: 421 VEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKE 467
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 103/244 (42%), Gaps = 20/244 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V + + D + +I A+ + A ++F+ + +NVV+W+ + G A +
Sbjct: 258 VHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGR 317
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVGT 139
+ + F M++ MP+ T+ +L +C + EG +V +G I
Sbjct: 318 AKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYG 377
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI-----NGYISCGDIVSARCLFELAP 193
+++L +E + ++ M + + V+W +++ +G + G V A L ELAP
Sbjct: 378 CMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRV-AEHLMELAP 436
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-WNTMLSGYANNGDVEECKRLFE 252
D + + + Y + N K+ M + DV + W+ + C + E
Sbjct: 437 H-DSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVSARWHPE----------DACXDMLE 485
Query: 253 EMPE 256
E PE
Sbjct: 486 EAPE 489
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 302/542 (55%), Gaps = 22/542 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE- 79
I + +GL+ +++ ++ + + A +F + +++V+WNAM GYA +
Sbjct: 147 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 206
Query: 80 FHRTVVVLFT-QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---- 134
+H V L + QM+ PN T +L + AL +G +H ++ +N
Sbjct: 207 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSK 266
Query: 135 ------IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ +GTAL+++Y+ ++ A +VF M RN V W+++I G++ C + A L
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326
Query: 189 FE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYA 239
F+ + + L T ++ + ++ ++ +Q+ D+ + N++LS YA
Sbjct: 327 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA 386
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G +++ LF+EM ++ S++ L+ GY NG E FK+M V P+ AT+V
Sbjct: 387 KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM-QACNVEPDAATMV 445
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+++ AC+ L AL + H G + NALIDMYAKCG I+ + VFN M ++
Sbjct: 446 SLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR 505
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+++WNT+I+G +HG G A +LF EM N G PDG+TFI +L AC+H GLV EG +F
Sbjct: 506 DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 565
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y + P++EHY CMVDLL+R G L EA +F++ MP+ AD +W LLG+CRVYKN
Sbjct: 566 HVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 625
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++L + + EL P+ NFV+LSNIY GR+ + A +++ + GFKK PGCS IE
Sbjct: 626 IDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIE 685
Query: 540 VN 541
+N
Sbjct: 686 IN 687
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 207/447 (46%), Gaps = 26/447 (5%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV--VVLFTQMKKLDAMPNCFTFPIV 106
++ A +FD+I +V ++N + Y+ + + L+ +M + PN +TFP
Sbjct: 72 HLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFA 131
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
LK+C + G +H + G +A++FV TAL+++Y + A +F M R++
Sbjct: 132 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 191
Query: 167 VVWTSMINGYISCG---------------------DIVSARCLFELAPERDVILWNTIVS 205
V W +M+ GY G + + L L ++ + T V
Sbjct: 192 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 251
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
Y +R + + + V+ +L YA G + +R+F+ MP RN +W+ L
Sbjct: 252 AY-RIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
IGG+ + FK ML +G F + +I + L ACA L L + +H +G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
++ GN+L+ MYAK G+I+ A+ +F+ M KD ++++ ++SG +GR A +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+M+ PD T + ++ AC+H+ ++ G S+ + + + ++D+ A+
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKC 489
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLG 472
GR+ + MP D V W ++
Sbjct: 490 GRIDLSRQVFNMMP-SRDIVSWNTMIA 515
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNG--LFFEVLDAFKRMLTEGRVFPNDATI 298
+G + LF+++P +V ++N LI Y+++ + L ++RML RV PN+ T
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRH-RVAPNNYTF 128
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
L AC+ L + +H +A + G Q ++ V AL+DMY KC + +A +F +M
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 359 KDLITWNTIISGLAMHG--RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+DL+ WN +++G A HG A A L +M+ P+ T + +L G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 417 SY--FQSMAMDYS-------IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
S ++ A +S + + ++D+ A+ G L A MP + V W
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTW 307
Query: 468 ANLLG 472
+ L+G
Sbjct: 308 SALIG 312
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 17/285 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ +++ A+ + A +FD++ ++ VS++A+ +GY QN
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G H V+ G + +
Sbjct: 421 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 480
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI++Y+ I+ + +VF M R++V W +MI GY G A LF L
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 540
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECK 248
D + + ++S +IE + F M P+ + + M+ + G ++E
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRME--HYICMVDLLSRGGFLDEAY 598
Query: 249 RLFEEMPER-NVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEG 289
+ MP R +V W L+G Y N L +V + + EG
Sbjct: 599 EFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 643
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 191/533 (35%), Positives = 298/533 (55%), Gaps = 9/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + V+ G+ I ++ + + A + F +NVV WN M Y Q
Sbjct: 335 QLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLG 394
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F QM+ MPN +T+P +L++C + AL GE++H V+K+GF+ N++V +
Sbjct: 395 NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS 454
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
LI++Y+ ++ A + + E +VV WT+MI GY A LF+ +
Sbjct: 455 VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLF 251
D I +++ +S ++ + + +++ Q +D+ N ++S YA G ++ F
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAF 574
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E++ ++ SWN LI G+A +G E L F +M G V N T + +SA A +
Sbjct: 575 EKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAG-VEANLFTFGSAVSATANTANI 633
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H GY N LI +Y+KCG IE+A F M K++++WN +I+G
Sbjct: 634 KQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY 693
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ HG G+ A+SLF EMK G MP+ +TF+G+L AC+H+GLV EGLSYF+SM+ ++ +VP+
Sbjct: 694 SQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPK 753
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
EHY C+VDLL RA L A +F++ MPIE DA+IW LL +C V+KN+E+ E A L
Sbjct: 754 PEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLL 813
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP++ A +V+LSN+Y G+W R + M+D G KK PG S IEV +
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSI 866
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 222/467 (47%), Gaps = 25/467 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI +++ G S + +I ++ + A+ +F+++ ++ VSW AM +G +QN
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNG 192
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++LF QM K +P + F VL +C KI + GE+LH ++K G + FV
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
AL+ LYS + AA ++F +M R+ + + S+I+G G A LFE + P
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKP 312
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + +++S V + ++L + K D+I ++L Y D+E
Sbjct: 313 --DCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
F NV WN ++ Y G E F +M EG + PN T ++L C LG
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG-LMPNQYTYPSILRTCTSLG 429
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
ALD + +H +G+Q NV V + LIDMYAK G ++ A + + +D+++W +I+
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG-----LSYFQSMAM 424
G H A AL LF EM+N G D I F + AC + + +G SY +
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
D SI +V L AR GR +A +++ + D + W L+
Sbjct: 550 DLSIG------NALVSLYARCGRAQDAYLAFEKIDAK-DNISWNALI 589
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 235/467 (50%), Gaps = 15/467 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
++E K Q+ +V GL ++ ++T ++ + A ++F K+ ++ +S+N+
Sbjct: 225 KIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNS 284
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ +G AQ F + LF +M+ LD M P+C T +L +C + A +G++LH V+K
Sbjct: 285 LISGLAQRGFSDRALQLFEKMQ-LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKM 343
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G +++ + +L++LY IE A++ F + NVV+W M+ Y G++ + +F
Sbjct: 344 GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF 403
Query: 190 ------ELAPER---DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
L P + IL G +D+ I ++ + +V + ++ YA
Sbjct: 404 LQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT-QVIKSGFQFNVYVCSVLIDMYAK 462
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
+G+++ + + + + E +V SW +I GY + LF E L F+ M +G + ++ +
Sbjct: 463 HGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQG-IRSDNIGFSS 521
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+SACA + AL+ + +H + +GY ++ +GNAL+ +YA+CG ++A F +D KD
Sbjct: 522 AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
I+WN +ISG A G AL +F +M AG + TF + A + +++G
Sbjct: 582 NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQG-KQIH 640
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+M + + E ++ L ++ G + +A MP E + V W
Sbjct: 641 AMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSW 686
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 239/500 (47%), Gaps = 26/500 (5%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
+S L K LH ++ SG + D + R+I ++ A K+FD I NV
Sbjct: 22 NSGSLLDAKKLH---ARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF 78
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA-LREGEELHCLV 126
WN + +G + V+ LF+ M + P+ TF VL++C A + E++H +
Sbjct: 79 WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+ +GF ++ V LI+LYS ++ A VF + ++ V W +MI+G G A
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW---------NTMLSG 237
LF + VI + S + IE KL +Q+ ++ W N +++
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL-HGFIVKWGLSSETFVCNALVTL 257
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G++ +++F +M R+ S+N LI G A G L F++M + + P+ T
Sbjct: 258 YSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC-MKPDCVT 316
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ ++LSACA +GA K +H Y G ++ + +L+D+Y KC IE A + F + +
Sbjct: 317 VASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTE 376
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
T++++ WN ++ G + + +F +M+ G MP+ T+ IL CT +G ++ G
Sbjct: 377 TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQ 436
Query: 418 -YFQSMAMDYSIVPQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ Q + + Q Y C ++D+ A+ G L A ++R+ E D V W ++
Sbjct: 437 IHTQVIKSGF----QFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAG- 490
Query: 475 RVYKNVELAELALERLTELE 494
Y +L AL+ E+E
Sbjct: 491 --YTQHDLFAEALKLFQEME 508
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 20/394 (5%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M++ N T+ + + C +L + ++LH + K+GF +G+ LI++Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI-- 208
++ A K+F ++ NV W +I+G ++ LF L +V + + +
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 209 --------DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
V I A+ + ++ N ++ Y+ NG V+ K +FE + ++
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVC-NPLIDLYSKNGHVDLAKLVFERLFLKDSV 179
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SW +I G + NG E + F +M + V P +VLSAC ++ + +H +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQM-HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
G V NAL+ +Y++ G + A +F+ M +D I++N++ISGLA G A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGC 437
L LF +M+ PD +T +L AC +G +G SY M M ++ + G
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE----GS 354
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++DL + + A ++ E + V+W +L
Sbjct: 355 LLDLYVKCFDIETAHEYFLTTETE-NVVLWNVML 387
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 296/533 (55%), Gaps = 10/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q++T+ + + ++ A+ +Q+ A KMFD++ ++++VSWN + G++QN
Sbjct: 168 EIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNG 227
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + + L +M+ P+ T VL + + L G+ +H ++ GF + + T
Sbjct: 228 FAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIST 287
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL ++YS ++E A +F MD++ VV W SM++GY+ G+ A +FE E +
Sbjct: 288 ALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDP 347
Query: 198 --ILWNTIVSGYIDVRNMIEAR---KLFDQMP-KKDVISWNTMLSGYANNGDVEECKRLF 251
+ + D+ ++ + K DQ+ D+ N+++S Y+ V+ +F
Sbjct: 348 TGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIF 407
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ R SWN +I GYA NG E L+ F M + G + P+ T+V+V+ A A L
Sbjct: 408 NNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVT 466
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+KW+H + N+ V AL+DMY+KCG I A +F+ + + +ITWN +I G
Sbjct: 467 RHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGY 526
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G AL LF +MK P+ IT++ ++ AC+H GLV+EGL +F+SM DY + P
Sbjct: 527 GTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPS 586
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HYG MVDLL RAGR+ EA DF++ MPI ++ G+C+++KN+E+ E A ++L
Sbjct: 587 MDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLF 646
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
EL P V+L+NIY +W VA ++ M G KK PGCS +E+ NEV
Sbjct: 647 ELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEV 699
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 215/414 (51%), Gaps = 9/414 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E + K LHQI V+ +GL ++++ ++ + A ++F+ I D+ ++
Sbjct: 57 ELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYH 116
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+N T + +M+ D P + F +LK C L+ G+E+H ++ N
Sbjct: 117 TMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN 176
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
F AN+F T ++ +Y+ + I+ AYK+F M ER++V W ++I G+ G A L
Sbjct: 177 SFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELV 236
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK---KDVISWNTMLSG-YANN 241
+ D I T++ DV ++ + + + +++ +T L+ Y+
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKC 296
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G VE + +F+ M ++ V SWN ++ GY NG + + F++ML EG + P TI+
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEG-IDPTGVTIMEA 355
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACA LG L+ K+VH + + ++ V N+LI MY+KC ++ A D+FN+++ +
Sbjct: 356 LHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
++WN +I G A +GR + AL+ F EMK+ G PD T + ++ A + +
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L T+H I ++ S L+K+ ++T ++ ++ + ARK+FD I+D++V++WNA
Sbjct: 462 ELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNA 521
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKN 129
M +GY + R + LF +MKK PN T+ V+ +C + EG +
Sbjct: 522 MIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDY 581
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIV 183
G ++ A+++L I+ A+ M + V+ + I+ I G+
Sbjct: 582 GLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGE-K 640
Query: 184 SARCLFELAPER---DVILWNTIV-----SGYIDVRNMIEARKLFDQMPKKDVISW-NTM 234
+A+ LFEL P+ V+L N S +VR +E +K + P V+ N +
Sbjct: 641 AAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTME-KKGLKKTPGCSVVELRNEV 699
Query: 235 LSGYANNGDVEECKRLFEEMPE 256
S Y+ + + KR++ + E
Sbjct: 700 HSFYSGSTTHPQSKRIYAFLEE 721
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 290/531 (54%), Gaps = 40/531 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A ++F K+ +++ VSWN M + +Q+ F + F +M PN T+ VL +C
Sbjct: 199 ALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTS 258
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
I L G LH +++ +++ G LI++Y+ +E+A +VF + E N V WTS+
Sbjct: 259 IYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSL 318
Query: 173 INGYISCGDIVSARCLFELAPE-------------------------------------- 194
I G G A LF E
Sbjct: 319 IGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGL 378
Query: 195 -RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
V + N +V+ Y ++ +A F+ MP +D+ISW M++ ++ GDVE+ + F++
Sbjct: 379 DSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDK 438
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MPERNV SWN ++ Y G + E L + +ML EG V + T T +SACA L L
Sbjct: 439 MPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREG-VKTDWITFSTSISACADLAVLIL 497
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ AE G+ NV V N+++ MY++CG IE A +F+S+ K+L++WN +++G A
Sbjct: 498 GNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQ 557
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
+G+G + +F +M N G +PD I+++ +L C+H G V EG YF SM D+ I P E
Sbjct: 558 NGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSE 617
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H+ CMVDLL RAG+L +A + + +MP + +A IW LL +CR++ N +LAELA++ L EL
Sbjct: 618 HFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLEL 677
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ + P ++ +L+NIY + G+ + V ++ MRD G +K PGCS IEV+ V
Sbjct: 678 DAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRV 728
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 212/472 (44%), Gaps = 54/472 (11%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
+K C + ++ +LH ++ G +++IF+ L+ +YS I AY+VFG + NV
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY------------------- 207
W +MI+G+ G + A LFE PERD + WN+++SGY
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYL 130
Query: 208 -----------------------------IDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
I M A+K+F + P + WN+M+ GY
Sbjct: 131 KLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGY 190
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+ G V++ LF +MPER+ SWN +I + +G E L+ F M +G PN T
Sbjct: 191 SKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQG-FRPNSMTY 249
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+VLSAC + L++ +H +V G LIDMYAKCG +E+A VF+ +
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ ++W ++I G+A G AL LF++M+ D T +L C + G
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIG-EQ 368
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
+ + + + +V + A+ G + +A + MPI D + W ++ +
Sbjct: 369 LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAG 427
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+VE A +++ E +N ++ + Y G W++ ++ + M G K
Sbjct: 428 DVEKAREYFDKMPE---RNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 476
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 197/409 (48%), Gaps = 53/409 (12%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE HLH ++V Y +I A+ ++ AR++FD +T+ N VSW ++
Sbjct: 262 LEWGAHLH---ARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSL 318
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
G AQ F +VLF QM+++ + FT VL C+ + GE+LH + G
Sbjct: 319 IGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGL 378
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++ V AL+ +Y+ + A F M R+++ WT+MI + GD+ AR F+
Sbjct: 379 DSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDK 438
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLS----------- 236
PER+VI WN++++ Y+ E K++ QM K D I+++T +S
Sbjct: 439 MPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILG 498
Query: 237 ----------GYANN--------------GDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
G+++N G +EE +++F + +N+ SWN ++ GYA N
Sbjct: 499 NQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQN 558
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG-----YQ 327
G +V++ F++ML G V P+ + V+VLS C+ G + ++ + + +
Sbjct: 559 GQGRKVIEIFEKMLNIGNV-PDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSE 617
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
VC ++D+ + G +E A ++ N M K + W +++ +HG
Sbjct: 618 HFVC----MVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHG 662
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 194/452 (42%), Gaps = 55/452 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ Q++ GL+ S ++ ++ + ++ A ++F I NV SWN M +G+A +
Sbjct: 25 KLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSG 84
Query: 80 FHRTVVVLFTQMKKLDA------MPNCF---TFPIVLKSCVKINALREGEELHCLVLKNG 130
R LF +M + D+ M F +K+ + L+ +LH K
Sbjct: 85 QMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFD 144
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F + V T+++++Y A++ A KVF ++ W SMI GY G + A LF
Sbjct: 145 FGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFA 204
Query: 191 LAPERDVILWNTIVS-------------GYIDVRNM------------------------ 213
PERD + WNT++S ++++ N
Sbjct: 205 KMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEW 264
Query: 214 ---IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ AR + P DV + ++ YA G +E +++F+ + E N SW LIGG A
Sbjct: 265 GAHLHAR-IVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVA 323
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G E L F +M E V + T+ TVL C + + +H + G +V
Sbjct: 324 QAGFQEEALVLFNQM-REVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSV 382
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V NAL+ MYAKCG + A F M +D+I+W +I+ + G A F +M
Sbjct: 383 PVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPER 442
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+ I++ +L G EEGL + M
Sbjct: 443 ----NVISWNSMLATYMQRGYWEEGLKVYIQM 470
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 32/259 (12%)
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+ CA L ++ ++ +H + G + ++ + N L++MY+ CG+I +A VF + ++
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+WNT+ISG A G+ A LF +M D +++ ++ H G +E + S
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNGELEATIKASGS 126
Query: 422 MA--------------MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ D+ I +E ++D+ + G + A R P W
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVE--TSVLDMYIKCGAMDFAQKVFCRTP-NPSLFCW 183
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
+++ Y +V + ALE ++ ++ ++ + +I G + + M +
Sbjct: 184 NSMIYGYSKYGSV---KKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240
Query: 528 GFKK--------LPGCSSI 538
GF+ L C+SI
Sbjct: 241 GFRPNSMTYASVLSACTSI 259
>gi|115458312|ref|NP_001052756.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|32479728|emb|CAE01515.1| OJ991214_12.4 [Oryza sativa Japonica Group]
gi|113564327|dbj|BAF14670.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|125590342|gb|EAZ30692.1| hypothetical protein OsJ_14749 [Oryza sativa Japonica Group]
Length = 545
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 297/527 (56%), Gaps = 4/527 (0%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+ T + L Q+ ++V GL + R AC L + A + V NA
Sbjct: 18 RCRTARCLAQLHARIVRLGLHNHHALLARFAAACDALSCPSVAASLLSVAVP--VRLRNA 75
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ A++ R + F ++ + P+ F+FP +L +C + ++L G LH ++ G
Sbjct: 76 VLASLARHAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASSLPTGASLHAAAIRLG 135
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
A++FV TALI+ Y A AA +F + + V WT+++ Y++ GDI++AR LF+
Sbjct: 136 VDADLFVRTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTAYVNSGDILTARELFD 195
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R+V+ WN +V GY+ ++ ARKLFD+MP++ ++ +++ GY N G++ + L
Sbjct: 196 QIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLIGGYLNAGNMGAARTL 255
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+++ +R++F+W+ +I G A NG E L F + + P++ IV ++SAC++LG
Sbjct: 256 FDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQ-EICPDELVIVGLMSACSQLGN 314
Query: 311 LDFSKWVHVYAE-YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ ++W+ Y Y NV V LI+M AKCG +E A +F SM +D+ ++ +++
Sbjct: 315 ITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFESMSVRDVFSYCSMMQ 374
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +HG + A+ LF +M G PD F +L AC+H GLVEEG YF M +Y IV
Sbjct: 375 GHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEGKRYFDMMKNEYMIV 434
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +HY C+V LL R G L +A + +K MP E W LLG C+ + ++EL ++A ++
Sbjct: 435 PSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCDIELGKIAAKK 494
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
L E+EP+N N+V LSNIY ++ RW +V+ + M G K+ GC+
Sbjct: 495 LFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGCT 541
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 186/510 (36%), Positives = 297/510 (58%), Gaps = 15/510 (2%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-- 98
ITA A+ + AR++FD + ++VVSWNA+ R L + D MP
Sbjct: 14 ITALARAGDVAAARRVFDAMPRRDVVSWNALLTA-----LWRAGRDLPAARRLFDDMPSR 68
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE-LYSTGKAIEAAYKV 157
N ++ V+ C+ L + R N+ A++ L G+ ++ A+ +
Sbjct: 69 NVISWNSVVAGCLAHGDL----DAASAYFARAPRRNVASWNAMLAGLVRLGR-MDDAWAL 123
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
FGEM +RNVV +T+M++G G++ AR +F+ PER+++ W +++GY++ EAR
Sbjct: 124 FGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEAR 183
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
KLF+ MP K+V++ M++GY +GDVE +RLF+ +P ++V SWN +I GY +NG E
Sbjct: 184 KLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHGEE 243
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
+ M EG V P+ AT++ +L+AC+ L L + H A + + NAL+
Sbjct: 244 AMKLHIIMFREG-VKPDHATLIAILTACSALALLRQGRSTHAVATKTMLESSTSFCNALM 302
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
MY+KCG + + VF ++ +D+++WNTII+ A HG+ A++LFHEM+ G +P+ I
Sbjct: 303 TMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPNDI 362
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T + +L AC H+G V + L F M+ Y+I P EHY C+VD+L RAG+L +A ++K+
Sbjct: 363 TILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYACVVDILGRAGQLEKACSYIKK 422
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP EA+ +W LLG+ + + NV+L ELA + L + + + +VMLSNIY G W +V
Sbjct: 423 MPFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVSSGPYVMLSNIYAAAGMWGEV 482
Query: 518 ARIKVAMRDTGFKKLPGCSSIEV-NEVVML 546
R++ M++ G KK PG S E+ N+V M
Sbjct: 483 NRVRGQMKEKGVKKQPGYSWTEIANKVNMF 512
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 150/358 (41%), Gaps = 74/358 (20%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL-DAMP 98
++ A+ ++ AR++FD + ++N+VSW AM GY +N +F + +KL +AMP
Sbjct: 138 MVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVEN-------AMFDEARKLFEAMP 190
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ N+ TA+I Y +E+A ++F
Sbjct: 191 D---------------------------------KNVVACTAMITGYCKDGDVESARRLF 217
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV----SGYIDVRNMI 214
+ ++V+ W +MI GY+ G E A + +I++ V + I +
Sbjct: 218 DGIPVKDVISWNAMITGYVHNGH-------GEEAMKLHIIMFREGVKPDHATLIAILTAC 270
Query: 215 EARKLFDQMPKKDVISWNTMLSG-----------YANNGDVEECKRLFEEMPERNVFSWN 263
A L Q ++ TML Y+ G+V E + +F + +++ SWN
Sbjct: 271 SALALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWN 330
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVH 318
+I YA +G + + + F M T G + PND TI+++LSAC +G ++ F
Sbjct: 331 TIIAAYAQHGKYQKAIALFHEMETRG-LIPNDITILSMLSACGHVGRVNDSLELFDLMSS 389
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
YA + CV +D+ + G +E A M + W ++ HG
Sbjct: 390 KYAISPSAEHYACV----VDILGRAGQLEKACSYIKKMPFEAERNVWGALLGASKTHG 443
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ A GDV +R+F+ MP R+V SWN L+ G L A +R+ +
Sbjct: 11 NQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAG---RDLPAARRLFDD--- 64
Query: 292 FPNDATIV--TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
P+ I +V++ C G LD + A + NV NA++ + G +++A
Sbjct: 65 MPSRNVISWNSVVAGCLAHGDLDAASAYFARAP----RRNVASWNAMLAGLVRLGRMDDA 120
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+F M ++++++ T++ GLA G A A +F M + +++ ++
Sbjct: 121 WALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPER----NLVSWAAMITGYVEN 176
Query: 410 GLVEEGLSYFQSM 422
+ +E F++M
Sbjct: 177 AMFDEARKLFEAM 189
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 130/309 (42%), Gaps = 51/309 (16%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H + T+ + LE S ++T ++ + + +F + Q++VSWN +
Sbjct: 276 LRQGRSTHAVATKTM---LESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTI 332
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV-LKNG 130
YAQ+ ++ + LF +M+ +PN T +L +C + + + EL L+ K
Sbjct: 333 IAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYA 392
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD---ERNVVVWTSMINGYISCGDIVSARC 187
+ ++++ +E A +M ERN VW +++ + G++
Sbjct: 393 ISPSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERN--VWGALLGASKTHGNVQ---- 446
Query: 188 LFELAPERDVILWNTIVSG-YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
L ELA + ++ +++ SG Y+ + N+ YA G E
Sbjct: 447 LGELAAKM-LVQSDSVSSGPYVMLSNI------------------------YAAAGMWGE 481
Query: 247 CKRLFEEMPERNV-----FSW-------NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
R+ +M E+ V +SW N +GG A++ +++ +++ ++ +
Sbjct: 482 VNRVRGQMKEKGVKKQPGYSWTEIANKVNMFVGGDASHPEMNKIISELRKISFHMQMMTD 541
Query: 295 DATIVTVLS 303
+ +V L+
Sbjct: 542 ETHMVVELA 550
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 320/584 (54%), Gaps = 69/584 (11%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWNAMFNGYAQNEFH 81
+ +G E + ++ ++ ++ + A +FD+IT + +V+SWN++ + +
Sbjct: 175 ICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNP 234
Query: 82 RTVVVLFTQM------KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
RT + LF++M K + + + +L +C + AL + +E+H ++NG A+
Sbjct: 235 RTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADA 294
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV ALI+ Y+ ++ A KVF M+ ++VV W +M+ GY G+ +A LFE +
Sbjct: 295 FVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKE 354
Query: 196 ----DVILWNTIVSGYIDVRNMIEARKLFDQM------P--------------------- 224
DVI W+ +++GY EA F QM P
Sbjct: 355 NIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQG 414
Query: 225 --------KKDVIS----------------WNTMLSGYANNGDVEECKRLFEEMP--ERN 258
KK ++S +N ++ Y+ + + +F+ +P ERN
Sbjct: 415 MEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERN 474
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWV 317
V +W +IGGYA G + L F M+++ V PN TI +L ACA L AL K +
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQI 534
Query: 318 HVY-AEYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
H Y ++ Y+ +V V N LIDMY+KCG ++ A +VF+SM ++ ++W +++SG MHG
Sbjct: 535 HAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
RG AL +F +M+ AG +PD I+F+ +L AC+H G+V++GL+YF M DY +V EHY
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHY 654
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
C++DLLAR GRL +A ++ MP+E AVIW LL +CRV+ NVELAE AL +L ++
Sbjct: 655 ACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+N ++ ++SNIY + RWKDVARI+ M+ +G KK PGCS ++
Sbjct: 715 ENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQ 758
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 239/524 (45%), Gaps = 82/524 (15%)
Query: 25 VVTSGLEKSDYITPRII--------TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
V + L Y++P+ + AC K A + +++T V WN + +
Sbjct: 69 VPLAPLPSHSYVSPKSLGTGVVASYLACGATKD---ALSVLERVTPSPAVWWNLLVREHI 125
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + + +M + P+ FT P LK+C ++ + G LH L+ NGF +N+F
Sbjct: 126 KEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVF 185
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDER---NVVVWTSMINGY----------------- 176
V AL+ +YS ++E A VF E+ + +V+ W S++ +
Sbjct: 186 VCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS 245
Query: 177 --------------ISCGDIVSARCLFELAPE--------------RDVILWNTIVSGYI 208
IS +I+ A + P+ D + N ++ Y
Sbjct: 246 MIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYA 305
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN----VFSWNG 264
+M +A K+F+ M KDV+SWN M++GY +G+ LFE M + N V +W+
Sbjct: 306 KCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSA 365
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA--- 321
+I GYA G E LDAF++M+ +G PN TI+++LSACA LGAL +H Y+
Sbjct: 366 VIAGYAQRGCSQEALDAFQQMILDGSE-PNSVTIISLLSACASLGALSQGMEIHAYSLKK 424
Query: 322 ---------EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWNTIISG 370
+G ++ V NALIDMY+KC + A +F+S+ ++ ++TW +I G
Sbjct: 425 CLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGG 484
Query: 371 LAMHGRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
A +G AL +F EM K P+ T IL AC H+ + G + +
Sbjct: 485 YAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEY 544
Query: 429 VPQIEHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
P + C++D+ ++ G + A + MP + + V W +++
Sbjct: 545 EPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMM 587
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 173/462 (37%), Gaps = 134/462 (29%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L+ + +I + + +G ++ +I A+ M A K+F+ + ++VVSWNA
Sbjct: 271 SLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNA 330
Query: 71 MFNGYAQNEFHRTVVVLFTQMKK--------------------------LDAM------- 97
M GY Q+ LF M+K LDA
Sbjct: 331 MVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDG 390
Query: 98 --PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA------------NIFVGTALIE 143
PN T +L +C + AL +G E+H LK + ++ V ALI+
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALID 450
Query: 144 LYSTGKAIEAAYKVFGEMD--ERNVVVWTSMINGYISCGDIVSARCLFE--------LAP 193
+YS ++ +AA +F + ERNVV WT MI GY GD A +F +AP
Sbjct: 451 MYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAP 510
Query: 194 ERDVI-----------------------------------LWNTIVSGYIDVRNMIEARK 218
I + N ++ Y ++ AR
Sbjct: 511 NAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARN 570
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD MPK++ +SW +M+SGY +G + E
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGK-------------------------------EA 599
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVG 333
LD F +M G V P+D + + +L AC+ G +D F Y + CV
Sbjct: 600 LDIFDKMQKAGFV-PDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACV- 657
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
ID+ A+CG ++ A M + + W ++S +H
Sbjct: 658 ---IDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVH 696
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 295/542 (54%), Gaps = 45/542 (8%)
Query: 10 EQLETTKHLHQIQTQVVTS-GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
+Q K L+++ +++V + L + +++ A + + + AR +FD+ ++NVV +
Sbjct: 46 DQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFF 105
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N M Y N + + +F M P+ +TFP VLK+C ++ LR G ++H ++K
Sbjct: 106 NVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVK 165
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G N+F+G AL+ +Y + A KV +M R+VV W SM+ GY G A
Sbjct: 166 VGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA--- 222
Query: 189 FELAPERDVILWN---------TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
E+ E D + N + V Y + N+ +F++M KK++ISWN M++ Y
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYV 282
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
NN E LF +M E + P+ TI
Sbjct: 283 NNSMPNEAVSLFLQMEECG--------------------------------MKPDAVTIA 310
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++L AC L AL + +H Y E Q N+ + NAL+DMYAKCG +E A DVF+ M +
Sbjct: 311 SLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+++W +++S G+G A++LF +M ++G+ PD I F+ +L AC+H GL+++G YF
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYF 430
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ M Y IVP+IEH+ CMVDL RAG + EA F+K+MP+E + +W LL +CRV+
Sbjct: 431 RMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSK 490
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+++ +A + L +L PK +V+LSNIY G WKDV ++ AM+ G KK+PG S++E
Sbjct: 491 MDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVE 550
Query: 540 VN 541
+N
Sbjct: 551 LN 552
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 192/533 (36%), Positives = 297/533 (55%), Gaps = 9/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + ++ +G+ + ++ + + A ++FD NVV WN M Y Q +
Sbjct: 265 QLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQID 324
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F +M PN FT+P +L++C + GE++H L +KNGF+++++V
Sbjct: 325 DLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSG 384
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
LI++YS ++ A ++ ++E++VV WTSMI GY+ A F+ +
Sbjct: 385 VLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWP 444
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKK--------DVISWNTMLSGYANNGDVEECKRLF 251
N ++ I I+A Q+ + DV WN ++ YA G +E F
Sbjct: 445 DNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSF 504
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E + + +WNGLI G+A +GL+ E L F +M G + N T V+ +SA A L +
Sbjct: 505 EAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKY-NVFTFVSSISASANLADI 563
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H GY + NALI +Y KCG IE+A F M ++ ++WNTII+
Sbjct: 564 KQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCC 623
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ HGRG AL LF +MK G P +TF+G+L AC+H+GLVEEGL YF+SM+ ++ I P+
Sbjct: 624 SQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPR 683
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+HY C+VD+L RAG+L A FV+ MPI AD+++W LL +C+V+KN+E+ E A + L
Sbjct: 684 PDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLL 743
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP + A++V+LSN Y G+W +I+ M+D G +K PG S IEV VV
Sbjct: 744 ELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVV 796
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 242/529 (45%), Gaps = 32/529 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + + GL I +I A+ + AR++F++++ ++ VSW A+ +GYAQN
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V L+ +M + +P + +L +C K + G +H V K GF + FVG
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI LY ++ A +VF +M + V + ++I+G+ CG A +F+ L+P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKR 249
D + ++++ V ++ + ++L + K D I ++L Y +GD+EE +
Sbjct: 243 --DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ NV WN ++ Y + D F RML G V PN T +L C G
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAG-VRPNKFTYPCMLRTCTHTG 359
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ + +H NG+Q ++ V LIDMY+K G ++ A + + ++ KD+++W ++I+
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL F EM+ G PD I + AC + V +G Y +
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
D SI + +V L AR G EA + + + + W L+ + L E
Sbjct: 480 DVSI------WNGLVYLYARCGISKEAFSSFEAIE-HKEGITWNGLISG---FAQSGLYE 529
Query: 485 LALERLTELEPK----NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
AL+ +++ N FV + +L K +I + TG+
Sbjct: 530 EALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGY 578
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L K QI +V+ +G I+ +I+ + + A+ F ++T +N VSW
Sbjct: 557 SANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSW 616
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
N + +Q+ + LF QMK+ P+ TF VL +C + + EG
Sbjct: 617 NTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 299/531 (56%), Gaps = 11/531 (2%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + G + + +I+ +++ A+K+FD++TD++V+SWN+M +GY +N
Sbjct: 271 RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKN 330
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG-FRANIFV 137
+ +F +M + T V +C I L G+ LH +K +
Sbjct: 331 GLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRF 390
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
L+++YS + +A +VF MDE+ VV WTSMI GY+ G A LF+ R V
Sbjct: 391 NNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGV 450
Query: 198 ILWNTIVSGYID---VRNMIEARKLFDQMPKKDVISWNTMLSG-----YANNGDVEECKR 249
+ V+ ++ + +++ K+ +++ + N+ +S YA G +++
Sbjct: 451 VPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHD 510
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +++V SWN +IGGY N L E L F M E + P+ T+ +L ACA L
Sbjct: 511 VFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK--PDGTTVACILPACASLA 568
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
ALD + +H YA NGY + V NA++DMY KCG++ A +F+ + KDL++W +I+
Sbjct: 569 ALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIA 628
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G MHG G+ A++ F++M+ G PD ++FI IL AC+H GL++EG F M + I
Sbjct: 629 GYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIE 688
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +EHY CMVDLLAR G L +A F+K MPI+ DA IW LL CR++ +V+LAE ER
Sbjct: 689 PNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAER 748
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ ELEP+N +V+L+NIY + +W++V +++ + G KK PGCS IE+
Sbjct: 749 IFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEI 799
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 199/408 (48%), Gaps = 23/408 (5%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L+ C + ++R+G + ++ +G + +G L+ +Y ++ VF ++ E
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 166 VVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFD 221
+ +W MI+ Y G+ + LF EL + + +++I+ + V + E R++
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 222 QMPKKDVISWNT----MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+ K S+NT ++S Y V ++LF+E+ +R+V SWN +I GY NGL
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA-EYNGYQGNVCVGNAL 336
++ F +ML G V + AT+V V ACA +G L K +H Y+ + V N L
Sbjct: 336 GIEIFIKMLVFG-VDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMY+KCG + +A+ VF MD K +++W ++I+G G GA+ LF EMK+ G +PD
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLARAGRLAEAV 452
IL AC G ++ G + DY +E + D+ A+ G + +A
Sbjct: 455 YAVTSILNACAINGNLKSG-----KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAH 509
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
D M + D + W ++G Y L AL E++ ++ +
Sbjct: 510 DVFSHMK-KKDVISWNTMIGG---YTKNSLPNEALTLFAEMQRESKPD 553
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%)
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++L CA ++ + V E +G + +G L+ MY KCG ++ VF+ +
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ WN +IS + G +++LF +M G P+ TF IL + VEEG
Sbjct: 215 KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 195/509 (38%), Positives = 278/509 (54%), Gaps = 21/509 (4%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
YA K D SWNA A+ + + L+ QM PN FTFP KSC
Sbjct: 10 YANKWLD--LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCA 67
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE-MDERNVVV-W 169
++ G +LH V+K G FV T+LI +Y I +A KVF E RN+ V +
Sbjct: 68 SLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCY 127
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV------------RNMIEAR 217
++I GY A LF + V + + G I V + R
Sbjct: 128 NALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVR 187
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
D D+ N +L+ Y G V+ ++LF+ MPE+ + +WN +I GYA NGL
Sbjct: 188 FGLD----GDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGH 243
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
VLD +++M G + P+ T+V VLS+CA LGA + V E +G+ N + NALI
Sbjct: 244 VLDLYRKMEFTG-IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALI 302
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
+MYA+CG + A +F+ M K++I+W II+G MHG+G A+ LF EM ++ E+PDG
Sbjct: 303 NMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGA 362
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
F+ +L AC+H GL E+GL YF +M DY + P EHY C+VDLL RAGRL EA +
Sbjct: 363 AFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGS 422
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
M +E D +W LLG+C++++NVELAELA E++ E EP N +V+LSNI+ + G + +
Sbjct: 423 MSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGI 482
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
R++V MR+ KK PGCS +E + L
Sbjct: 483 LRVRVMMRERKLKKEPGCSYVEYQGRIHL 511
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 161/402 (40%), Gaps = 83/402 (20%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN--VVSWNAMFNGYAQ 77
Q+ V+ +G E ++ +I+ + + ARK+FD+ V +NA+ GY+
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N V+LF QM+K N T ++ C L G LH ++ G ++ V
Sbjct: 137 NSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSV 196
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS------------------- 178
G L+ +Y +++ A K+F M E+ ++ W +MI+GY
Sbjct: 197 GNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI 256
Query: 179 -------CGDIVSARCLFELAPERDV-------------ILWNTIVSGYIDVRNMIEARK 218
G + S L A R+V L N +++ Y N+++AR
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARA 316
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD M +K+VISW +++GY +G E +LF+EM +
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSD-------------------- 356
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVG 333
P+ A V+VLSAC+ G + F+ Y G + CV
Sbjct: 357 ------------ELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCV- 403
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+D+ + G +E A + SM + D W ++ +H
Sbjct: 404 ---VDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+++ ++ SG + ++ +I A+ + AR +FD +T++NV+SW A+ GY +
Sbjct: 281 EVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHG 340
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
V LF +M D +P+ F VL +C +G + ++ G +
Sbjct: 341 QGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHY 400
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLFELAPERD- 196
+ +++L +E A K+ G M E + VW +++ ++ A FE E +
Sbjct: 401 SCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEP 460
Query: 197 ------VILWNTI-----VSGYIDVRNMIEARKL 219
V+L N + G + VR M+ RKL
Sbjct: 461 TNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKL 494
>gi|296082839|emb|CBI22140.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/425 (41%), Positives = 260/425 (61%), Gaps = 5/425 (1%)
Query: 119 GEELHCLVLKNGFRAN---IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
G +H V K GF I+V TAL++ Y +E A K+F EM ERNVV W SM+ G
Sbjct: 3 GISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAG 62
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML 235
Y+ GD+ A LF+ PER+ WN ++SG+++ ++ AR FD MP+K+ +SW TM+
Sbjct: 63 YLKAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMI 122
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG-RVFPN 294
SGY+ GDV+ LF+++ +++ +N +I YA N E L+ F ML V P+
Sbjct: 123 SGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPD 182
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ T+ +V+SAC++LG L F W+ Y G + + + AL+D+YAKCG I+ A ++F+
Sbjct: 183 EMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFH 242
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ KDL+ + +I G ++G+ A+ LF EM +A P+ ITFIG+L A H GLVEE
Sbjct: 243 GLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEE 302
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G F SM Y++VP ++HYG MVDL RAGRL EA++ +K MP++ A +W LL +C
Sbjct: 303 GYRCFTSMK-KYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLAC 361
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++ NVE E+A + ELEP +LSNIY RW DV R++ ++ GF K+PG
Sbjct: 362 RLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPG 421
Query: 535 CSSIE 539
CS +E
Sbjct: 422 CSWME 426
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 152/382 (39%), Gaps = 82/382 (21%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y+ ++ +L M ARKMFD++ ++NVVSWN+M GY + LF QM +
Sbjct: 23 YVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPE- 81
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
N A+I + I++A
Sbjct: 82 --------------------------------------RNFASWNAMISGHVEFGDIDSA 103
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
F M ++N V W +MI+GY CGD+ SA LF+ +D++L+N +++ Y
Sbjct: 104 RSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPN 163
Query: 215 EARKLF------------DQMPKKDVIS------------W-----------------NT 233
EA LF D+M VIS W
Sbjct: 164 EALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATA 223
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+L YA G +++ LF + ++++ ++ +I G NG + + F M+ + ++FP
Sbjct: 224 LLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMV-DAQIFP 282
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
N T + +L+A G ++ + +V ++D++ + G ++ A+++
Sbjct: 283 NSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELI 342
Query: 354 NSMDTKDLI-TWNTIISGLAMH 374
SM + W ++ +H
Sbjct: 343 KSMPMQPHAGVWGALLLACRLH 364
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 45/286 (15%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM--KKLDAM 97
+I+ ++ + A ++FD++ ++++ +NAM YAQN + LF M ++
Sbjct: 121 MISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQ 180
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ T V+ +C ++ LR G + + + G + + TAL++LY+ +I+ AY++
Sbjct: 181 PDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYEL 240
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F + ++++V +T+MI G CG ++G I+A
Sbjct: 241 FHGLRKKDLVAYTAMILG---CG-----------------------ING-----KAIDAI 269
Query: 218 KLFDQMPKKDV----ISWNTMLSGYANNGDVEECKRLFEEMPERN----VFSWNGLIGGY 269
KLFD+M + I++ +L+ Y + G VEE R F M + N V + ++ +
Sbjct: 270 KLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMVDLF 329
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
G E L+ K M + P+ +L AC ++F +
Sbjct: 330 GRAGRLQEALELIKSMPMQ----PHAGVWGALLLACRLHNNVEFGE 371
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 97/227 (42%), Gaps = 14/227 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + I++ + G+E ++ ++ A+ + A ++F + +++V++ A
Sbjct: 195 QLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTA 254
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G N + LF +M PN TF +L + + EG + K
Sbjct: 255 MILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYN 314
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVS 184
++ +++L+ ++ A ++ M + + VW ++ ++ + G+I +
Sbjct: 315 LVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAA 374
Query: 185 ARCLFELAPERD---VILWNTIVSG--YIDVRNM--IEARKLFDQMP 224
C FEL P+ +L N SG + DV+ + + K F ++P
Sbjct: 375 QHC-FELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIP 420
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 319/618 (51%), Gaps = 88/618 (14%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI---TDQNVVSWNA 70
T + Q+ +Q+V + + ++ R+I A+ +++ARK+FD I + +++ WN+
Sbjct: 43 TLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNS 102
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ + +H+ + L+ +M+KL +P+ FT P+V+++C + + +HC L+ G
Sbjct: 103 IIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMG 162
Query: 131 FRANIFVGTALIELYS---------------------------TGKAIE----AAYKVFG 159
FR ++ V L+ +Y +G A+ A +VF
Sbjct: 163 FRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFK 222
Query: 160 EMD----ERNVVVWTSMINGYISCGDIVSARCLFELAPERDV------------------ 197
M+ + N V WTS+++ + CG LF++ R +
Sbjct: 223 RMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMA 282
Query: 198 -ILWNTIVSGYI--------------------DVRNMIEARKLFDQMPKKDVISWNTMLS 236
+ W + GY+ ++M +A K+F ++ K+++SWN ++S
Sbjct: 283 EVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALIS 342
Query: 237 GYANNGDVEECKRLFEEMPER----------NVFSWNGLIGGYANNGLFFEVLDAFKRML 286
YA +G +E F M + NV SW+ +I G+A G + L+ F++M
Sbjct: 343 SYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQ 402
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
+V N TI +VLS CA L AL+ + +H YA N N+ VGN LI+MY KCG
Sbjct: 403 L-AKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDF 461
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+ VF++++ +DLI+WN++I G MHG G AL F+EM A PD ITF+ IL AC
Sbjct: 462 KEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSAC 521
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+H GLV G + F M ++ I P +EHY CMVDLL RAG L EA D V+ MPIE + +
Sbjct: 522 SHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYV 581
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W LL SCR+YK++++ E ++ L+ K +F++LSNIY GRW D AR++V+ R
Sbjct: 582 WGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSARVRVSART 641
Query: 527 TGFKKLPGCSSIEVNEVV 544
G KK+PG S IEV + V
Sbjct: 642 KGLKKIPGQSWIEVRKKV 659
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 319/582 (54%), Gaps = 67/582 (11%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWNAMFNGYAQNEFH 81
+ +G E + +I ++ ++ + A +FD+IT + +V+SWN++ + + ++
Sbjct: 36 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 95
Query: 82 RTVVVLFTQM------KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
T + LF++M K + + + +L +C + A+ + +E+H ++NG ++
Sbjct: 96 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 155
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG ALI+ Y+ +E A KVF M+ ++VV W +M+ GY G+ +A LF+ +
Sbjct: 156 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 215
Query: 196 ----DVILWNTIVSGYIDVRNMIEARKLFDQM---------------------------- 223
D++ W +++GY EA +F QM
Sbjct: 216 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 275
Query: 224 ---------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP--ERNVF 260
+D++ +N ++ Y+ + + +F+++P ERNV
Sbjct: 276 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 335
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWVHV 319
+W +IGG+A G + L F M++E V PN TI +L ACA L A+ K +H
Sbjct: 336 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 395
Query: 320 YA-EYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
Y ++ Y + V N LI+MY+KCG ++ A VF+SM K I+W ++++G MHGRG
Sbjct: 396 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 455
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ AL +F +M+ AG +PD ITF+ +L AC+H G+V++GLSYF SM+ DY + P+ EHY
Sbjct: 456 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY 515
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+DLLAR GRL +A VK MP+E AV+W LL +CRV+ NVELAE AL +L E+ +N
Sbjct: 516 AIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 575
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++ ++SNIY GRWKDVARI+ M+ +G KK PGCS ++
Sbjct: 576 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 617
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 211/444 (47%), Gaps = 81/444 (18%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
FT P VLK+C ++ + R G H L+ NGF +N+F+ AL+ +YS ++E A +F E
Sbjct: 11 FTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDE 70
Query: 161 MDER---NVVVWTSMINGYISCGDIVSARCLF---------------------------- 189
+ +R +V+ W S+++ ++ + +A LF
Sbjct: 71 ITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 130
Query: 190 ---ELAPER--------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
+ P+ DV + N ++ Y M A K+F+ M KDV+SWN
Sbjct: 131 GSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 190
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNV----FSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
M++GY+ +G+ + LF+ M + N+ +W +I GY+ G E L+ F++M+
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYA----------EYNGYQGNVCVGNALID 338
G + PN TI++VLSACA LGA +H Y+ ++ G ++ V NALID
Sbjct: 251 GSL-PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 309
Query: 339 MYAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHEM--KNAGEMP 394
MY+KC + A +F+ ++ ++++TW +I G A +G AL LF EM + G P
Sbjct: 310 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 369
Query: 395 DGITFIGILCACTHMGLVEEG-------LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ T IL AC H+ + G L + Q + Y + C++++ ++ G
Sbjct: 370 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVA------NCLINMYSKCGD 423
Query: 448 LAEAVDFVKRMPIEADAVIWANLL 471
+ A M + A+ W +++
Sbjct: 424 VDTARHVFDSMS-QKSAISWTSMM 446
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 183/426 (42%), Gaps = 64/426 (15%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L+ ++ + +G ++ +I A A+ M A K+F+ + ++VVSWNA
Sbjct: 132 SLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 191
Query: 71 MFNGYAQNEFHRTVVVLFTQMKK----LD------------------------------- 95
M GY+Q+ + LF M+K LD
Sbjct: 192 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 251
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKN----------GFRANIFVGTALIELY 145
++PNC T VL +C + A +G E+H LKN G ++ V ALI++Y
Sbjct: 252 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 311
Query: 146 STGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSARCLF--------ELAPER 195
S ++ +AA +F + ++ERNVV WT MI G+ GD A LF +AP
Sbjct: 312 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 371
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKL-FDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
IL I + I A L Q N +++ Y+ GDV+ + +F
Sbjct: 372 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 431
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ M +++ SW ++ GY +G E LD F +M G V P+D T + VL AC+ G +
Sbjct: 432 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMV 490
Query: 312 D--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL-ITWNTII 368
D S + + A+Y G ID+ A+ G ++ A M + + W ++
Sbjct: 491 DQGLSYFDSMSADY-GLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALL 549
Query: 369 SGLAMH 374
S +H
Sbjct: 550 SACRVH 555
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 319/582 (54%), Gaps = 67/582 (11%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWNAMFNGYAQNEFH 81
+ +G E + +I ++ ++ + A +FD+IT + +V+SWN++ + + ++
Sbjct: 143 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 202
Query: 82 RTVVVLFTQM------KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
T + LF++M K + + + +L +C + A+ + +E+H ++NG ++
Sbjct: 203 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 262
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG ALI+ Y+ +E A KVF M+ ++VV W +M+ GY G+ +A LF+ +
Sbjct: 263 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 322
Query: 196 ----DVILWNTIVSGYIDVRNMIEARKLFDQM---------------------------- 223
D++ W +++GY EA +F QM
Sbjct: 323 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382
Query: 224 ---------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP--ERNVF 260
+D++ +N ++ Y+ + + +F+++P ERNV
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWVHV 319
+W +IGG+A G + L F M++E V PN TI +L ACA L A+ K +H
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502
Query: 320 YA-EYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
Y ++ Y + V N LI+MY+KCG ++ A VF+SM K I+W ++++G MHGRG
Sbjct: 503 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 562
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ AL +F +M+ AG +PD ITF+ +L AC+H G+V++GLSYF SM+ DY + P+ EHY
Sbjct: 563 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY 622
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+DLLAR GRL +A VK MP+E AV+W LL +CRV+ NVELAE AL +L E+ +N
Sbjct: 623 AIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 682
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++ ++SNIY GRWKDVARI+ M+ +G KK PGCS ++
Sbjct: 683 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 724
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 241/525 (45%), Gaps = 86/525 (16%)
Query: 25 VVTSGLEKSDYITPR-----IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
V L +I+PR ++ + YA + +++T V WN + + +
Sbjct: 37 VSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQG 96
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + + +M + + FT P VLK+C ++ + R G H L+ NGF +N+F+
Sbjct: 97 RLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICN 156
Query: 140 ALIELYSTGKAIEAAYKVFGEMDER---NVVVWTSMINGYISCGDIVSARCLF------- 189
AL+ +YS ++E A +F E+ +R +V+ W S+++ ++ + +A LF
Sbjct: 157 ALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIV 216
Query: 190 ------------------------ELAPER--------------DVILWNTIVSGYIDVR 211
+ P+ DV + N ++ Y
Sbjct: 217 HEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCG 276
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV----FSWNGLIG 267
M A K+F+ M KDV+SWN M++GY+ +G+ + LF+ M + N+ +W +I
Sbjct: 277 LMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIA 336
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA------ 321
GY+ G E L+ F++M+ G + PN TI++VLSACA LGA +H Y+
Sbjct: 337 GYSQRGCSHEALNVFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLL 395
Query: 322 ----EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHG 375
++ G ++ V NALIDMY+KC + A +F+ ++ ++++TW +I G A +G
Sbjct: 396 TLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYG 455
Query: 376 RGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEG-------LSYFQSMAMDY 426
AL LF EM + G P+ T IL AC H+ + G L + Q + Y
Sbjct: 456 DSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAY 515
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ C++++ ++ G + A M + A+ W +++
Sbjct: 516 FVA------NCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMM 553
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 183/426 (42%), Gaps = 64/426 (15%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L+ ++ + +G ++ +I A A+ M A K+F+ + ++VVSWNA
Sbjct: 239 SLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNA 298
Query: 71 MFNGYAQNEFHRTVVVLFTQMKK----LD------------------------------- 95
M GY+Q+ + LF M+K LD
Sbjct: 299 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 358
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKN----------GFRANIFVGTALIELY 145
++PNC T VL +C + A +G E+H LKN G ++ V ALI++Y
Sbjct: 359 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 418
Query: 146 STGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSARCLF--------ELAPER 195
S ++ +AA +F + ++ERNVV WT MI G+ GD A LF +AP
Sbjct: 419 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 478
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKL-FDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
IL I + I A L Q N +++ Y+ GDV+ + +F
Sbjct: 479 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 538
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ M +++ SW ++ GY +G E LD F +M G V P+D T + VL AC+ G +
Sbjct: 539 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMV 597
Query: 312 D--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL-ITWNTII 368
D S + + A+Y G ID+ A+ G ++ A M + + W ++
Sbjct: 598 DQGLSYFDSMSADY-GLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALL 656
Query: 369 SGLAMH 374
S +H
Sbjct: 657 SACRVH 662
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 303/545 (55%), Gaps = 47/545 (8%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S + K LH + +V +G +S +I+ R++ A L ++ +R FD+I ++V +W
Sbjct: 29 STKTPFAKCLHAL---LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAW 85
Query: 69 NAMFNGYAQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N+M + Y N FH + + + + P+ +TFP VLK+C L +G ++HC
Sbjct: 86 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAF 142
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF+ N+FV +LI +YS FG +T + AR
Sbjct: 143 KLGFQWNVFVAASLIHMYSR----------FG---------FTGI------------ARS 171
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV-ISWNTMLS-------GYA 239
LF+ P RD+ WN ++SG I N +A + D+M + + +++ T++S YA
Sbjct: 172 LFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYA 231
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G ++ ++FE +P ++V SWN LI GYA NGL E ++ +K M + PN T V
Sbjct: 232 KLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 291
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++L A A +GAL +H +V V LID+Y KCG + +A+ +F + +
Sbjct: 292 SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 351
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+TWN IIS +HG L LF EM + G PD +TF+ +L AC+H G VEEG F
Sbjct: 352 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 411
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ M +Y I P ++HYGCMVDLL RAG L A DF+K MP++ DA IW LLG+CR++ N
Sbjct: 412 RLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+EL + A +RL E++ KN +V+LSNIY ++G+W+ V +++ R+ G KK PG S+IE
Sbjct: 471 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 530
Query: 540 VNEVV 544
VN V
Sbjct: 531 VNRKV 535
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 317/585 (54%), Gaps = 49/585 (8%)
Query: 29 GLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVL 87
GLE++ P R+I A ++ ARK+FD +++VVSW A+ + YA+ R L
Sbjct: 36 GLERAQ--DPNRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSL 93
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS- 146
F + DA N T+ +L + + E E ++ + + N+ ++E Y+
Sbjct: 94 F---DRSDARRNVVTWTALLSGYARAGLVDEAE----VLFQRMPQRNVVSWNTMLEAYAV 146
Query: 147 TGKA------------------------------IEAAYKVFGEMDERNVVVWTSMINGY 176
G+A ++ A ++FG M ER+V+ WT+M++G
Sbjct: 147 AGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGV 206
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLS 236
G++ AR LF+ PER+V+ WN ++SGY + EA LF +MP +D+ S N M++
Sbjct: 207 ARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMIT 266
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
G+ N D++ ++LF+EMPERNV +W ++ GY L F+ ML G + PN
Sbjct: 267 GFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSG-IRPNQV 325
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T + L AC+ L L K VH +Q + VG+AL+++YAKCG + A +F+
Sbjct: 326 TFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLS 385
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
KDLI+WN II+ A HG G A+ L+ +M+ G P+ +T++ +L AC+H GLV+EGL
Sbjct: 386 REKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGL 445
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE-ADAVIWANLLGSCR 475
F+SM D SI + EHY C++DL +RAGRL +A + + I+ A +W+ LLG C
Sbjct: 446 KIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCN 505
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
+ N + LA L + EP N + +LSNIY G+WK+ A I+ M + G KK PGC
Sbjct: 506 AHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGC 565
Query: 536 SSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIV 580
S IEV V + ++R+ KS +E+++I L QN H + IV
Sbjct: 566 SWIEVANKVHV-FVARD---KS--HSESDLIYGLLQNIHYMMRIV 604
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 132/322 (40%), Gaps = 47/322 (14%)
Query: 175 GYISCGDI--VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
Y+S G SA E A + + ++ + +G + +ARKLFD P++DV+SW
Sbjct: 21 AYVSYGSAAATSAAVGLERAQDPNRLIVDLAAAGRV-----WDARKLFDGTPERDVVSWT 75
Query: 233 TMLSGYANNGDVEECKRLFEEM-PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
++S YA G + + + LF+ RNV +W L+ GYA GL E F+RM V
Sbjct: 76 ALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVV 135
Query: 292 FPND-----ATIVTVLSACA---RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
N A ACA R+ D W N L+ M +
Sbjct: 136 SWNTMLEAYAVAGRAGDACALFDRMPVRDAGSW-----------------NILLAMLVRS 178
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G ++ A ++F M +D++ W T++ G+A G A LF M + +++ ++
Sbjct: 179 GSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPE----RNVVSWNAMI 234
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIE 461
T ++E L F M P + C M+ + L A MP E
Sbjct: 235 SGYTRNHRLDEALDLFTKM-------PHRDIASCNIMITGFIQNKDLKRARKLFDEMP-E 286
Query: 462 ADAVIWANLLGSCRVYKNVELA 483
+ V W ++ K EL+
Sbjct: 287 RNVVTWTTMMNGYLKGKQSELS 308
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + + ++ ++ A+ ++ ARK+FD +++++SWN + YA +
Sbjct: 345 QVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHG 404
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVG 138
+ L+ +M+ PN T+ ++L +C + EG ++ +V
Sbjct: 405 VGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHY 464
Query: 139 TALIELYSTGKAIEAAYKV--FGEMDERNVVVWTSMINGYISCGDI----VSARCLFELA 192
T LI+L S ++ A ++ + ++ + VW++++ G + G+ ++AR L +
Sbjct: 465 TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAE 524
Query: 193 PE 194
P+
Sbjct: 525 PD 526
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 306/567 (53%), Gaps = 46/567 (8%)
Query: 8 HSEQLETTKHLHQIQTQVVTSG-LEKSDYITPRIITACAQLKQM-TYARKMFD------- 58
H+ ++L Q+ ++ SG L S ++ A A + YA +F
Sbjct: 22 HAPLRTDPRYLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPL 81
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALR 117
NV+ + G+ ++ H LF +M + ++ P+ T LKSC ++ L
Sbjct: 82 STPCYNVLMRALLHAGHPEDALH-----LFVEMLDVASVCPDQHTVACALKSCSRMCTLD 136
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
G + +K G A+ FV ++LI +Y++ + + AA +F ++E VV+W ++I Y+
Sbjct: 137 VGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYM 196
Query: 178 SCGDIVSA----RCLFELAPERDVILWNTIVSG---------------YIDVRNMIEARK 218
G+ + + + E+ D I ++V+ Y+D + ++ R
Sbjct: 197 KNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN 256
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
L ++ YA G++ + +RLF+ M R+V +W+ +I GY E
Sbjct: 257 LM-----------TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREA 305
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L F M V PND T+V+VLSACA LGAL+ KWVH Y + +G AL+D
Sbjct: 306 LALFSEMQL-AEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVD 364
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
YAKCG I++AV+ F SM K+ TW +I G+A +GRG AL LF M+ A P +T
Sbjct: 365 FYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVT 424
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
FIG+L AC+H LVEEG +F SM DY I P+ EHYGC+VDLL RAG + EA F++ M
Sbjct: 425 FIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTM 484
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
PIE +AVIW LL SC V+KNVE+ E AL+++ L P + ++++LSNIY +G+WK+ A
Sbjct: 485 PIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAA 544
Query: 519 RIKVAMRDTGFKKLPGCSSIEVNEVVM 545
I+ M+D G +K PGCS IE++ VV+
Sbjct: 545 MIRKEMKDRGIEKTPGCSLIELDGVVV 571
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 300/503 (59%), Gaps = 17/503 (3%)
Query: 56 MFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
+F++ D+ +V SWN++ A++ + F+ M+KL P +FP +K+C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ G++ H G++++IFV +ALI +YST +E A KVF E+ +RN+V WTSMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 175 GYISCGDIVSARCLFE--LAPERD----VILWNTIVSGYIDVRNMIEARKLFDQMPK--- 225
GY G+ + A LF+ L E D + L + + I + + A+ L + +
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210
Query: 226 -----KDVISWNTMLSGYANNGD--VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ V NT+L YA G+ V +++F+++ +++ S+N ++ YA +G+ E
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
D F+R++ E V N T+ TVL A + GAL K +H G + +V VG ++ID
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG +E A F+ M K++ +W +I+G MHG A AL LF M ++G P+ IT
Sbjct: 331 MYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC+H GL + G +F +M + + P +EHYGCMVDLL RAG L +A D +++M
Sbjct: 391 FVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKM 450
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
+E D++IW++LL +CR++KNVELAE+++ RL EL+P N +++LS+IY D GRWKDV
Sbjct: 451 KMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVE 510
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
R+++ M++ G K PG S +E+N
Sbjct: 511 RVRMTMKNRGLVKPPGFSLLELN 533
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 174/379 (45%), Gaps = 30/379 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q G + +++ +I + ++ ARK+FD+I +N+VSW +M GY N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 80 FHRTVVVLFTQM--KKLDAMPNCFTFPI----VLKSCVKINALREGEELHCLVLKNGFRA 133
V LF + ++ D F + V+ +C ++ A E +H V+K GF
Sbjct: 157 NALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDR 216
Query: 134 NIFVGTALIELYSTG--KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ VG L++ Y+ G + A K+F ++ +++ V + S+++ Y G A +F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRR 276
Query: 192 APERDVILWNTIV----------SGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSG 237
+ V+ +N I SG + + I DQ+ + DVI +++
Sbjct: 277 LIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIH-----DQVIRMGLEDDVIVGTSIIDM 331
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G VE + F+ M +NV SW +I GY +G + L+ F M+ G V PN T
Sbjct: 332 YCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYIT 390
Query: 298 IVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
V+VL+AC+ G D W + G + + ++D+ + G ++ A D+ M
Sbjct: 391 FVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKM 450
Query: 357 DTK-DLITWNTIISGLAMH 374
+ D I W+++++ +H
Sbjct: 451 KMEPDSIIWSSLLAACRIH 469
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
+HS L K +H QV+ GLE + II + ++ AR FD++ ++NV
Sbjct: 298 SHSGALRIGKCIHD---QVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVR 354
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW AM GY + + LF M PN TF VL +C G + +
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAM 414
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISC 179
+ G + +++L ++ AY + +M E + ++W+S+ I+ +
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVEL 474
Query: 180 GDIVSARCLFELAP 193
+I AR LFEL P
Sbjct: 475 AEISVAR-LFELDP 487
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 288/546 (52%), Gaps = 39/546 (7%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT---YARKMFDKITDQNVVSWNA 70
+ K Q+ ++ GL + I R I A T Y + + SW
Sbjct: 12 SVKQAKQVHALILIHGLSHLEPILARQILJSASNYSATVAQYVHSVLHHSKSPDSFSWAC 71
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
Q+ + L+ QM++ P F LK+C +I G +H V K G
Sbjct: 72 AIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFG 131
Query: 131 FRAN---IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
F I+V TAL++ Y +E A K+F EM ERNVV W SM+ GY+ GD+V A+
Sbjct: 132 FSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQR 191
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN--------------- 232
+F+ P++DVI WN+++SGY +M +A LF QMP+++ SWN
Sbjct: 192 VFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSA 251
Query: 233 ----------------TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
TM+SGY+ GDV+ LF+++ +++ +N +I YA N
Sbjct: 252 RSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPK 311
Query: 277 EVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E L F ML V P++ T+ +V+SAC++LG L F W+ Y G + + + A
Sbjct: 312 EALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATA 371
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+D+YAKCG I+ A ++F+ + KDL+ + +I G ++G+ A+ LF EM +A P+
Sbjct: 372 LLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPN 431
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITFIG+L A H GLVEEG F SM Y++VP ++HYG MVDLL RAGRL EA++ +
Sbjct: 432 LITFIGLLTAYNHAGLVEEGYRCFTSMK-KYNLVPSVDHYGIMVDLLGRAGRLQEALELI 490
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
K MP++ A +W LL +CR++ NVE E+A + ELEP +LSNIY RW
Sbjct: 491 KSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYXSLLSNIYASGERWD 550
Query: 516 DVARIK 521
DV R++
Sbjct: 551 DVKRLR 556
>gi|116309337|emb|CAH66421.1| H0622F05.4 [Oryza sativa Indica Group]
gi|116309402|emb|CAH66479.1| OSIGBa0137L20.8 [Oryza sativa Indica Group]
Length = 545
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 296/527 (56%), Gaps = 4/527 (0%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+ T + L Q+ ++V GL + R AC L + + V NA
Sbjct: 18 RCRTARCLAQLHARIVRLGLHNHHALLARFAAACDTLSCPSVVASLLSVAVP--VRLRNA 75
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ A++ R + F ++ + P+ F+FP +L +C + ++L G LH ++ G
Sbjct: 76 VLASLARHAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASSLPTGASLHAAAIRLG 135
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
A++FV TALI+ Y A AA +F + + V WT+++ Y++ GDI++AR LF+
Sbjct: 136 VDADLFVRTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTAYVNSGDILTARELFD 195
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R+V+ WN +V GY+ ++ ARKLFD+MP++ ++ +++ GY N G++ + L
Sbjct: 196 QIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLIGGYLNAGNMGAARTL 255
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+++ +R++F+W+ +I G A NG E L F + + P++ IV ++SAC++LG
Sbjct: 256 FDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQ-EICPDELVIVGLMSACSQLGN 314
Query: 311 LDFSKWVHVYAE-YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ ++W+ Y Y NV V LI+M AKCG +E A +F SM +D+ ++ +++
Sbjct: 315 ITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFESMSVRDVFSYCSMMQ 374
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +HG + A+ LF +M G PD F +L AC+H GLVEEG YF M +Y IV
Sbjct: 375 GHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEGKRYFDMMKNEYMIV 434
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +HY C+V LL R G L +A + +K MP E W LLG C+ + ++EL ++A ++
Sbjct: 435 PSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCDIELGKIAAKK 494
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
L E+EP+N N+V LSNIY ++ RW +V+ + M G K+ GC+
Sbjct: 495 LFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGCT 541
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 314/573 (54%), Gaps = 61/573 (10%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYA--------------RKMFDKITDQNVVSWN 69
+++ G +Y P +I AC LK + A R +FDK+ ++++V+W
Sbjct: 169 ELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWT 228
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+ +VLF +M++ +P+ V+ +C K+ A+ + + + +
Sbjct: 229 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 288
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY------------- 176
F+ ++ +GTA+I++Y+ +E+A ++F M+E+NV+ W++MI Y
Sbjct: 289 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 348
Query: 177 ----------------------ISCGDIVSARCLFELAPE----RDVILWNTIVSGYIDV 210
I+C ++ R + A +++I+ N +V Y
Sbjct: 349 RMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYY 408
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG--G 268
R + +A LFD M +D +SW+ M+ G+A GD C F E+ N + G
Sbjct: 409 RALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCG 468
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
AN L F +M EG V P+ +VTV+ ACA+LGA+ ++ + Y + +Q
Sbjct: 469 NANESLVL-----FDKMREEG-VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 522
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+V +G A+IDM+AKCG +E+A ++F+ M+ K++I+W+ +I+ HG+G AL LF M
Sbjct: 523 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 582
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+G +P+ IT + +L AC+H GLVEEGL +F M DYS+ ++HY C+VDLL RAGRL
Sbjct: 583 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRL 642
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA+ ++ M +E D +W LG+CR +K+V LAE A L EL+P+NP ++++LSNIY
Sbjct: 643 DEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIY 702
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ GRW+DVA+ + M KK+PG + IEV+
Sbjct: 703 ANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVD 735
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 228/508 (44%), Gaps = 44/508 (8%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+ Q+ Q G+ ++ + ++I + + + A +FD + ++ VSW+ M G+A
Sbjct: 96 QVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFA 155
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + F ++ + A P+ +T P V+++C + L+
Sbjct: 156 KVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ------------------- 196
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER- 195
AL+++Y + IE A +F +M ER++V WT MI GY CG + LFE E
Sbjct: 197 --MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECK 248
D + T+V + M +AR + D + +K DVI M+ YA G VE +
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 314
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ M E+NV SW+ +I Y +G + LD F+ ML+ G + P+ T+ ++L AC
Sbjct: 315 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSG-MLPDKITLASLLYACINC 373
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
L + VH A +G N+ V N L+ Y+ +++A +F+ M +D ++W+ ++
Sbjct: 374 RNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 433
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G A G F E+ G PD T G E L F M + +
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPDNYTL-------PFCGNANESLVLFDKMREE-GV 485
Query: 429 VPQIEHYGCMVDLLARAGRLAEAV---DFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
VP +V A+ G + +A D+++R + D ++ ++ ++ E
Sbjct: 486 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMID---MHAKCGCVES 542
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGR 513
A E +E KN ++ + YG G+
Sbjct: 543 AREIFDRMEEKNVISWSAMIAAYGYHGQ 570
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 22/304 (7%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
+ + V L + ++H +G NI V LI YS +A++ AY +F M R+
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 167 VVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
V W+ M+ G+ GD ++ R L D ++ D++N+ Q
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL--------Q 196
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
M D+ Y ++E+ + LF++M ER++ +W +IGGYA G E L F
Sbjct: 197 MALVDM---------YVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 247
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
++M EG V P+ +VTV+ ACA+LGA+ ++ + Y + +Q +V +G A+IDMYAK
Sbjct: 248 EKMREEG-VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 306
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG +E+A ++F+ M+ K++I+W+ +I+ HG+G AL LF M ++G +PD IT +
Sbjct: 307 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 366
Query: 403 LCAC 406
L AC
Sbjct: 367 LYAC 370
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 204 VSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+S ++ RN+ + R++ Q ++++ N ++ Y+ +++ LF+ M R+
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SW+ ++GG+A G + F+ ++ G P++ T+ V+ AC L L
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCG-ARPDNYTLPFVIRACRDLKNLQM------ 197
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
AL+DMY KC IE+A +F+ M +DL+TW +I G A G+
Sbjct: 198 ---------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANE 242
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYG 436
+L LF +M+ G +PD + + ++ AC +G + + Y Q ++
Sbjct: 243 SLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT---- 298
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
M+D+ A+ G + A + RM E + + W+ ++ +
Sbjct: 299 AMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAA 334
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 274/482 (56%), Gaps = 11/482 (2%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN A + L+ M + + P+ F+FP +LKSC ++ G++LHC V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN--VVVWTSMINGYISCGDIVSA 185
K G FV TALI +Y + A KVF E + + V + ++I+GY + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIE----ARKLFDQMPK----KDVISWNTMLSG 237
+F E V + + + G + + + E R L Q K +V N+ ++
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G VE +RLF+EMP + + +WN +I GY+ NGL ++VL+ +++M + G V P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCPDPFT 259
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+V+VLS+CA LGA V E NG+ NV V NA I MYA+CG + A VF+ M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K L++W +I MHG G L LF +M G PDG F+ +L AC+H GL ++GL
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
F++M +Y + P EHY C+VDLL RAGRL EA++F++ MP+E D +W LLG+C+++
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
KNV++AELA ++ E EP N +V++SNIY D + + RI+V MR+ F+K PG S
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 538 IE 539
+E
Sbjct: 500 VE 501
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 21/372 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYA 76
Q+ V G E ++ +I+ + + ARK+F++ + Q V +NA+ +GY
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N +F +MK+ + T ++ C L G LH +K G + +
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V + I +Y ++EA ++F EM + ++ W ++I+GY G L+E
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPK--------KDVISWNTMLSGYANNGDVEECK 248
V + + + A+K+ ++ K +V N +S YA G++ + +
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKAR 312
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ MP +++ SW +IG Y +G+ L F M+ G + P+ A V VLSAC+
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-IRPDGAVFVMVLSACSHS 371
Query: 309 GALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLI 362
G D F Y G + C L+D+ + G ++ A++ SM + D
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSC----LVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 363 TWNTIISGLAMH 374
W ++ +H
Sbjct: 428 VWGALLGACKIH 439
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 309/544 (56%), Gaps = 13/544 (2%)
Query: 9 SEQLETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
S+ + + +H Q+ ++ SG + + + ++ + +++ ARK+FD++T+++V
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+SWN++ NGY N + +F QM + T V C + G +H +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 126 VLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+K F R + F T L+++YS +++A VF EM +R+VV +TSMI GY G
Sbjct: 322 GVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 185 ARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKD----VISWNTMLS 236
A LFE E DV +++ R + E +++ + + + D + N ++
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA G ++E + +F EM +++ SWN +IGGY+ N E L F +L E R P++
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+ VL ACA L A D + +H Y NGY + V N+L+DMYAKCG + A +F+ +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+KDL++W +I+G MHG G A++LF++M+ AG D I+F+ +L AC+H GLV+EG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+F M + I P +EHY C+VD+LAR G L +A F++ MPI DA IW LL CR+
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ +V+LAE E++ ELEP+N +V+++NIY + +W+ V R++ + G +K PGCS
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 537 SIEV 540
IE+
Sbjct: 741 WIEI 744
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 210/417 (50%), Gaps = 16/417 (3%)
Query: 42 TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCF 101
T C LK+ A ++FD++ + + WN + N A++ + LF +M + +
Sbjct: 140 TNCGDLKE---ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
TF V KS + ++ GE+LH +LK+GF VG +L+ Y + +++A KVF EM
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEAR 217
ER+V+ W S+INGY+S G +F E D+ ++ +G D R +I
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR-LISLG 315
Query: 218 KLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ + K S NT+L Y+ GD++ K +F EM +R+V S+ +I GYA
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
GL E + F+ M EG + P+ T+ VL+ CAR LD K VH + + N ++ V
Sbjct: 376 GLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NAL+DMYAKCG ++ A VF+ M KD+I+WNTII G + + ALSLF+ +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 393 M-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
PD T +L AC + ++G M +VD+ A+ G L
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 202/479 (42%), Gaps = 87/479 (18%)
Query: 58 DKIT--DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
D IT D++V N + ++ V L K D P T VL+ C +
Sbjct: 52 DSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKS 109
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L++G+E+ + NGF + +G+ L +Y+ ++ A +VF E+ + W ++N
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 176 YISCGDIVSARCLFE--------------------LAPERDV------------------ 197
GD + LF+ + R V
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 198 -ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ N++V+ Y+ + + ARK+FD+M ++DVISWN++++GY +NG E+
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG--------- 280
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
L F +ML G + + ATIV+V + CA + +
Sbjct: 281 ----------------------LSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRA 317
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH + N L+DMY+KCG +++A VF M + ++++ ++I+G A G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIE 433
A+ LF EM+ G PD T +L C L++EG + + + + I
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS-- 435
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG----SCRVYKNVELAELALE 488
++D+ A+ G + EA M ++ D + W ++G +C + + L L LE
Sbjct: 436 --NALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLE 491
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 309/538 (57%), Gaps = 55/538 (10%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACA----QLKQMTYARKMFDKITDQNVVSWN 69
T + L QI + SG + I+ CA + + YA K+F+++ +N SWN
Sbjct: 28 TIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 87
Query: 70 AMFNGYAQNEFHRTVV--VLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
+ G+++++ + ++ LF +M + + PN FTFP VLK+C K +++G+++H L
Sbjct: 88 TIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLA 147
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LK GF + FV + L+ +Y + G M + V+ + ++I
Sbjct: 148 LKYGFGGDEFVMSNLVRMYV----------ICGLMKDACVLFYKNII------------- 184
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
ER++++ MI+ RK +V+ WN M+ GY GD +
Sbjct: 185 -------EREMVM-------------MIDRRKR-----DGEVVLWNVMIDGYMRLGDCKA 219
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LF++M +R+V SWN +I GY+ NG F + ++ F+ M + PN T+V+VL A +
Sbjct: 220 ARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVS 279
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
RLG+L+ +W+H+YAE +G + + +G+ALIDMY+KCGIIE A+ VF + +++ITW+
Sbjct: 280 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSA 339
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+G A+HG+ A+ F +M+ AG P + +I +L AC+H GLVEEG YF M
Sbjct: 340 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVD 399
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ P+IEHYGCMVDLL R G L EA +F+ MPI+ D VIW LLG+CR+++NVE+ +
Sbjct: 400 GLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRV 459
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++ P + +V LSN+Y G W +V+ +++ M++ +K PGCS I+++ V+
Sbjct: 460 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVL 517
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 314/552 (56%), Gaps = 25/552 (4%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ +T L ++ ++T+ + + R++ CA + YA+ +F++I ++
Sbjct: 13 EKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYI 72
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN+M GY+ +E + ++ +M++ P+ FTFP VLK+C +N G+ +H ++
Sbjct: 73 WNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIV 132
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF +++ TAL+++Y+ +EAA KVF ++ + NVV WTS+I G IS D S
Sbjct: 133 KTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCIS-NDCPSEAV 191
Query: 188 -------LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------PKKDVISWNTM 234
L+ +AP ++ + N +V+ R++ R + D+ P + ++N +
Sbjct: 192 RVYKDMELWSVAP-NEITMVNVLVAC-ARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVI 249
Query: 235 LSG-----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
L+ YA G ++ + LF +MP RN+ +WN +IG Y G E LD F M G
Sbjct: 250 LATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAG 309
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
P+ AT + V+ ACA LGAL + +H Y + +G AL+DMYAK G E A
Sbjct: 310 -FDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERA 368
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK-NAGEMPDGITFIGILCACTH 408
VF+ + KD+ W ++I GLAMHG G AL+ F +M+ + +PD IT+IG+L AC+H
Sbjct: 369 QQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSH 428
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
+G VE+G ++F SM + I P +HYGCMVDLL+RAGRL EA V++MP+E + IW+
Sbjct: 429 VGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWS 488
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LL C++Y+N+++A+ R+ ELE +V+LSNIY RW++V + M++
Sbjct: 489 ALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKERK 548
Query: 529 FKKLPGCSSIEV 540
+K G SS+E+
Sbjct: 549 IQKSLGHSSVEM 560
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/504 (38%), Positives = 282/504 (55%), Gaps = 47/504 (9%)
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKI----NALREGEELHCLVLKNGFRANIFVGTA 140
V + +M P+ +TFP +LK+ + + +H V++ G N V ++
Sbjct: 4 VAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASS 63
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY-------ISCGDIVS-ARCLFELA 192
L+ Y+ G AA + GE D V W ++I+G+ SCG V AR
Sbjct: 64 LVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPT 121
Query: 193 P-------------ERDVILW-------------------NTIVSGYIDVRNMIEARKLF 220
P RDV+L N +V Y + +M A K+F
Sbjct: 122 PVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVF 181
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D M + V+SW ++LSG A G V+E + LF+ MPER+ SW +I GY F E L+
Sbjct: 182 DGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALE 241
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F+ M V ++ T+V+V++ACA+LGAL+ +WV VY G + + VGNALIDMY
Sbjct: 242 MFREM-QYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 300
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KCG IE A+DVF M +D TW II GLA++G A+ +FH M E PD +TFI
Sbjct: 301 SKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFI 360
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
G+L ACTH GLV++G +F SM Y+I P + HYGC++DLL RAG++ EA+D + +MP+
Sbjct: 361 GVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPM 420
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
++ IW LL +CRV+ N E+ EL ERL EL+P+N +++LSNIY RW+DV R+
Sbjct: 421 TPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRL 480
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVV 544
+ A+ + G KK PGCS IE++ ++
Sbjct: 481 RHAIMEKGIKKEPGCSLIEMDGII 504
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 45/353 (12%)
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK-INALREGEELHC 124
V+WNA+ +G+ + F M + A P T+ VL +C K + G ++H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+ +G ++ V AL+++Y+ + +A+KVF M R+VV WTS+++G G +
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-------------------- 224
AR LF+ PERD + W ++ GY+ EA ++F +M
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 225 -------------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
K D N ++ Y+ G +E +F+ M R+ F+W +
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAI 327
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WVHVYAEY 323
I G A NG E ++ F RM+ P++ T + VL+AC G +D + ++ + Y
Sbjct: 328 ILGLAVNGYEEEAIEMFHRMIRVSET-PDEVTFIGVLTACTHAGLVDKGREFFLSMIEAY 386
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
N NV +ID+ + G I A+D + M T + W T+++ +HG
Sbjct: 387 N-IAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHG 438
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 55/323 (17%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ A+L Q+ AR +FD++ +++ VSW AM +GY R + +F +M+ + +
Sbjct: 195 LLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSAD 254
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
FT V+ +C ++ AL GE + + + G + + FVG ALI++YS +IE A VF
Sbjct: 255 EFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFK 314
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M R+ WT++I G V+GY + EA ++
Sbjct: 315 GMHHRDKFTWTAIILGL--------------------------AVNGYEE-----EAIEM 343
Query: 220 FDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPER-----NVFSWNGLIGGYA 270
F +M + D +++ +L+ + G V++ + F M E NV + +I
Sbjct: 344 FHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLG 403
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC-----ARLGALDFSKWVHVYAEYNG 325
G E LD +M + PN T+L+AC + +G L + + + E
Sbjct: 404 RAGKITEALDTIDQM----PMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPE--- 456
Query: 326 YQGNVCVGNALIDMYAKCGIIEN 348
N V L ++YAKC E+
Sbjct: 457 ---NSMVYILLSNIYAKCNRWED 476
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 286/502 (56%), Gaps = 13/502 (2%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
ARK+FD + ++N VSW M +GYA + + LF M++ + N F F VL +
Sbjct: 162 ARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTL 221
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ G+++HC+ +KNG + + VG AL+ +Y+ +++ A + F ++N + W++M
Sbjct: 222 PELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAM 281
Query: 173 INGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK- 225
I GY GD A LF + P + +++ D+ E +++ D + K
Sbjct: 282 ITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV--GVINACSDLGAAWEGKQVHDYLLKL 339
Query: 226 ---KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+ ++ YA + + ++ F+ + E ++ W +IGGY NG + L +
Sbjct: 340 GFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLY 399
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
RM EG + PN+ T+ +VL AC+ L AL+ K +H G+ V +G+AL MYAK
Sbjct: 400 GRMEMEG-ILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAK 458
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG +++ VF M +D+I+WN +ISGL+ +G G AL LF EM+ G PD +TF+ I
Sbjct: 459 CGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNI 518
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+HMGLVE G YF+ M ++ + P++EHY CMVD+L+RAG+L EA++F + I+
Sbjct: 519 LSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDH 578
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+W +LG+CR Y+N EL A E+L EL + + +V+LS+IY LGRW+DV R++
Sbjct: 579 GMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRR 638
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
M+ G K PGCS IE+ V
Sbjct: 639 MMKLRGVSKEPGCSWIELKSGV 660
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 231/470 (49%), Gaps = 17/470 (3%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H+ L+ K LH Q++ S YI ++ A+ +++ A+ +F++I +++VVS
Sbjct: 18 HNRSLQKGKALH---AQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVS 73
Query: 68 WNAMFNGYAQN--EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN + NGY+Q+ V+ LF +M+ + PN TF V + + G H +
Sbjct: 74 WNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAV 133
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K ++FVG++L+ +Y A KVF M ERN V W +MI+GY S A
Sbjct: 134 AIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEA 193
Query: 186 RCLFELAPERD----VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSG 237
LF L + ++ +++S + +++ K ++S N +++
Sbjct: 194 LGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTM 253
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA G +++ + FE ++N +W+ +I GYA +G + L F M G + P++ T
Sbjct: 254 YAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSG-IRPSEFT 312
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
V V++AC+ LGA K VH Y G++ + V AL+DMYAKC I +A F+ +
Sbjct: 313 FVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQ 372
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
D++ W ++I G +G ALSL+ M+ G +P+ +T +L AC+ + +E+G
Sbjct: 373 EPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQG-K 431
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ + Y ++ + + A+ G L + +RMP D + W
Sbjct: 432 QIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISW 480
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 15/361 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI V +GL + ++T A+ + A + F+ +D+N ++W+AM GYAQ+
Sbjct: 230 QIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSG 289
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF+ M P+ FTF V+ +C + A EG+++H +LK GF + I+V T
Sbjct: 290 DSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMT 349
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+++Y+ +I A K F + E ++V+WTSMI GY+ G+ A L+ ++
Sbjct: 350 ALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDV-------ISWNTMLSG-YANNGDVEECKRLF 251
++ + + + A + Q+ + V + + LS YA G +++ +F
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVF 469
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP R+V SWN +I G + NG E L+ F+ M EG P+ T V +LSAC+ +G +
Sbjct: 470 RRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEG-TKPDYVTFVNILSACSHMGLV 528
Query: 312 DFSKWVHVYAEYN--GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWNTI 367
+ W + ++ G V ++D+ ++ G ++ A++ F T D + W I
Sbjct: 529 E-RGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIE-FTESATIDHGMCLWRII 586
Query: 368 I 368
+
Sbjct: 587 L 587
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 11/313 (3%)
Query: 207 YIDVRNMIEARKLFDQMPKKD---VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
Y R++ + + L Q+ K V N++++ YA + E K +FE + ++V SWN
Sbjct: 16 YTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWN 75
Query: 264 GLIGGYANNGLF--FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
+I GY+ +G V++ F+RM E PN T V +A + L + H A
Sbjct: 76 CIINGYSQHGPSGSSHVMELFQRMRAENTA-PNAHTFAGVFTAASTLVDAAGGRLAHAVA 134
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
+V VG++L++MY K G+ A VF++M ++ ++W T+ISG A A AL
Sbjct: 135 IKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEAL 194
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M+ E + F +L A T LV G +A+ ++ + +V +
Sbjct: 195 GLFRLMRREEEGENEFVFTSVLSALTLPELVNNG-KQIHCIAVKNGLLSIVSVGNALVTM 253
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
A+ G L +A+ + + +++ W+ ++ + + A L L L P+ F
Sbjct: 254 YAKCGSLDDALQTFETSS-DKNSITWSAMITGYAQSGDSDKA-LKLFSSMHLSGIRPSEF 311
Query: 502 VMLS--NIYGDLG 512
+ N DLG
Sbjct: 312 TFVGVINACSDLG 324
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 217/641 (33%), Positives = 313/641 (48%), Gaps = 118/641 (18%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS------------- 67
+ ++ SG + YI R+I + + A +FD+I ++V+
Sbjct: 37 VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96
Query: 68 --------------------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
+NAM GY+ N + LF + + P+ FTF VL
Sbjct: 97 SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156
Query: 108 KSCVKI-NALREGEELHCLVLKNG---------FRANIFVGTALIELYSTGKAIEAAYKV 157
+ I ++ +++HC V+K+G ++FV A L S+ + AA K+
Sbjct: 157 GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKL 216
Query: 158 FGEMDERN-------------------------------VVVWTSMINGYISCGDIVSA- 185
F EM ER+ VV W +MI+GY+ G + A
Sbjct: 217 FDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEAL 276
Query: 186 ---RCLFELAPERDVILWNTIVSG---------------YI-------------DVRNMI 214
R ++ L + D + +++S YI V N +
Sbjct: 277 EMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNAL 336
Query: 215 -----------EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
EAR++F+QMP KD++SWN +LSGY N G ++E K FEEMPERN+ +W
Sbjct: 337 ATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWT 396
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G A NG E L F RM +EG P D + ACA L AL + +H
Sbjct: 397 VMISGLAQNGFGEESLKLFNRMKSEG-FEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR 455
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G+ ++ GNALI MYAKCG++E A +F +M D ++WN +I+ L HG GA AL L
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F M +PD ITF+ +L C+H GLVEEG YF+SM+ Y I P +HY M+DLL
Sbjct: 516 FELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLC 575
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+ +EA D ++ MP+E IW LL CR++ N++L A ERL EL P++ +V+
Sbjct: 576 RAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVL 635
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LSN+Y +GRW DVA+++ MRD G KK PGCS IEV V
Sbjct: 636 LSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKV 676
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 97/253 (38%), Gaps = 36/253 (14%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L H Q+ Q+V G + S +IT A+ + A +F + + VSWNAM
Sbjct: 440 LAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAM 499
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
Q+ + LF M K D +P+ TF VL +C + EG
Sbjct: 500 IAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYF-------- 551
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
K++ Y + D + MI+ G A+ + E
Sbjct: 552 -----------------KSMSGLYGICPGEDH-----YARMIDLLCRAGKFSEAKDMIET 589
Query: 192 AP-ERDVILWNTIVSGYIDVRNM----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
P E +W +++G NM A +LF+ MP+ D ++ + + YA G ++
Sbjct: 590 MPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDG-TYVLLSNMYATVGRWDD 648
Query: 247 CKRLFEEMPERNV 259
++ + M ++ V
Sbjct: 649 VAKVRKLMRDKGV 661
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 309/545 (56%), Gaps = 13/545 (2%)
Query: 9 SEQLETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
S+ + + +H Q+ ++ SG + + + ++ + +++ ARK+FD++T+++V
Sbjct: 51 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 110
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+SWN++ NGY N + +F QM + T V C + G +H +
Sbjct: 111 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 170
Query: 126 VLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+K F R + F T L+++YS +++A VF EM +R+VV +TSMI GY G
Sbjct: 171 GVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 229
Query: 185 ARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKD----VISWNTMLS 236
A LFE E DV +++ R + E +++ + + + D + N ++
Sbjct: 230 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 289
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA G ++E + +F EM +++ SWN +IGGY+ N E L F +L E R P++
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 349
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+ VL ACA L A D + +H Y NGY + V N+L+DMYAKCG + A +F+ +
Sbjct: 350 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 409
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+KDL++W +I+G MHG G A++LF++M+ AG D I+F+ +L AC+H GLV+EG
Sbjct: 410 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 469
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+F M + I P +EHY C+VD+LAR G L +A F++ MPI DA IW LL CR+
Sbjct: 470 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 529
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ +V+LAE E++ ELEP+N +V+++NIY + +W+ V R++ + G +K PGCS
Sbjct: 530 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 589
Query: 537 SIEVN 541
IE+
Sbjct: 590 WIEIK 594
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 202/402 (50%), Gaps = 13/402 (3%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
FD++ + + WN + N A++ + LF +M + +TF V KS + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
GE+LH +LK+GF VG +L+ Y + +++A KVF EM ER+V+ W S+INGY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 177 ISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-- 230
+S G +F E D+ ++ +G D R +I + + K S
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR-LISLGRAVHSIGVKACFSRE 179
Query: 231 ---WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
NT+L Y+ GD++ K +F EM +R+V S+ +I GYA GL E + F+ M
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG + P+ T+ VL+ CAR LD K VH + + N ++ V NAL+DMYAKCG ++
Sbjct: 240 EG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCAC 406
A VF+ M KD+I+WNTII G + + ALSLF+ + PD T +L AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+ ++G M +VD+ A+ G L
Sbjct: 359 ASLSAFDKGRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGAL 399
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 294/517 (56%), Gaps = 30/517 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ A+ M A ++F+++ ++NVVSWNAM +GY N + F M K D+
Sbjct: 158 MLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSA-- 215
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST--------GKAI 151
+ ++ ++ + L E E + +L+ G N+ G L++ Y+T G A
Sbjct: 216 --SLRALISGLIQNDKLVEAERI---LLQYG--GNVGKGD-LVDAYNTLIAGYGQKGMAY 267
Query: 152 EAAYKVFGEM--------DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
EA K+F + RNV+ W SMI Y+ GDIVSAR LF+ ERD WNT+
Sbjct: 268 EAR-KLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTM 326
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
+SGY+ + +M EA LF +MP+ D +SWN M+SG++ G ++ LF+ +PE+++ SWN
Sbjct: 327 ISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWN 386
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I GY N + ++ F +M EG+ P+ T+ ++LSACA L L +H
Sbjct: 387 SMISGYEKNEDYKGAMNIFLQMQLEGKK-PDRHTLSSILSACAGLVDLVLGTQIHQLVT- 444
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALS 382
+ ++ + N+L+ MY++CG I A VF+ M+ +D+I+WN +I G A HG AL
Sbjct: 445 KAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQ 504
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF MK P ITFI +L AC H GL+EEG F SM + I PQ+EHY +VD++
Sbjct: 505 LFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDII 564
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
R G+L EA+ + MP E D +W LLG+C+V+ NVE+A A E L +L+P++ A +V
Sbjct: 565 GRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESSAPYV 624
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+L N+Y D+GRW D A ++ M +K G S ++
Sbjct: 625 LLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 209/480 (43%), Gaps = 127/480 (26%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ--NEFHRTVVVLFTQMKKLDA 96
R+ITA + ++M AR++F+++ ++++VSWN M +GY +F +F QM + D
Sbjct: 93 RMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETD- 151
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
CV N + G Y+ ++ A +
Sbjct: 152 -------------CVSWNTMLSG-------------------------YAKSGMMDKAEE 173
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD-------------------- 196
+F EM ERNVV W +M++GY+ G + A F+L P+RD
Sbjct: 174 LFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEA 233
Query: 197 ----------------VILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWN 232
V +NT+++GY EARKLFD++P +++VISWN
Sbjct: 234 ERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWN 293
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+M+ Y GD+ + LF++M ER+ FSWN +I GY ++LD M +F
Sbjct: 294 SMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYV------QILD----MKEASNLF 343
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
+R+ D W N +I +++ G ++ A D+
Sbjct: 344 -------------SRMPEPDTLSW-----------------NMMISGFSEIGSLKLAHDL 373
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F + K L++WN++ISG + GA+++F +M+ G+ PD T IL AC GLV
Sbjct: 374 FKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACA--GLV 431
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ L + + + + +V + +R G + EA M ++ D + W ++G
Sbjct: 432 DLVLGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIG 491
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 37/345 (10%)
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
L TG+ I A ++F + N + W MI Y+ +++ AR LFE P RD++ WN +
Sbjct: 67 LIRTGR-INEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLM 125
Query: 204 VSGYIDV--RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+SGYI + + AR +FDQMP+ D +SWNTMLSGYA +G +++ + LF EMPERNV S
Sbjct: 126 LSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVS 185
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN ++ GY NG + ++ FK M + A++ ++S G + K V
Sbjct: 186 WNAMVSGYLMNGHVEKAIEFFKLMPKR-----DSASLRALIS-----GLIQNDKLVEAER 235
Query: 322 EYNGYQGNVCVG------NALIDMYAKCGIIENAVDVFNSM--------DTKDLITWNTI 367
Y GNV G N LI Y + G+ A +F+ + +++I+WN++
Sbjct: 236 ILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSM 295
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I G A LF +M D ++ ++ + ++E + F M
Sbjct: 296 IMCYVRAGDIVSARELFDKMVER----DTFSWNTMISGYVQILDMKEASNLFSRMP---- 347
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
P + M+ + G L A D KR+P E V W +++
Sbjct: 348 -EPDTLSWNMMISGFSEIGSLKLAHDLFKRIP-EKSLVSWNSMIS 390
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 155/351 (44%), Gaps = 29/351 (8%)
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N +S I + EAR+LFD + I+WN M++ Y ++ + ++LFEEMP R++
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120
Query: 261 SWNGLIGGYAN-NGLFFE-VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
SWN ++ GY + G F E + F +M V N T+LS A+ G +D K
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWN-----TMLSGYAKSGMMD--KAEE 173
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
++ E + NV NA++ Y G +E A++ F M +D + +ISGL + +
Sbjct: 174 LFNEMP--ERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLV 231
Query: 379 GALS-LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM----DYSIVPQIE 433
A L N G+ + ++ G+ E F + + YS I
Sbjct: 232 EAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVIS 291
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+ M+ RAG + A + +M +E D W ++ +++ A R+
Sbjct: 292 -WNSMIMCYVRAGDIVSARELFDKM-VERDTFSWNTMISGYVQILDMKEASNLFSRMP-- 347
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EP + +M+S + ++ +K+A FK++P S + N ++
Sbjct: 348 EPDTLSWNMMISG-------FSEIGSLKLA--HDLFKRIPEKSLVSWNSMI 389
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 296/542 (54%), Gaps = 45/542 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
+Q K L+++ +++V + + D + +++ A + + + AR +FD+ ++NVV +
Sbjct: 46 DQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFF 105
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N M Y N + + +F M P+ +TFP VLK+C ++ LR G ++H ++K
Sbjct: 106 NVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVK 165
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G N+F+G AL+ +Y + A KV +M R+VV W SM+ GY G A
Sbjct: 166 VGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA--- 222
Query: 189 FELAPERDVILWN---------TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
E+ E D + N + V Y + N+ +F++M KK++ISWN M++ Y
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYV 282
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
NN E LF +M E + P+ TI
Sbjct: 283 NNSMPNEAVSLFLQMEECG--------------------------------MKPDAVTIA 310
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++L AC L AL + +H Y E + N+ + NAL+DMYAKCG +E A DVF+ M +
Sbjct: 311 SLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+++W +++S G+G A++LF +M ++G+ PD I F+ +L AC+H GL+++G YF
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYF 430
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ M Y IVP+IEH+ CMVDL RAG + EA F+K+MP+E + +W LL +CRV+
Sbjct: 431 RMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSK 490
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+++ +A + L +L PK +V+LSNIY G WKDV ++ AM+ G KK+PG S++E
Sbjct: 491 MDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVE 550
Query: 540 VN 541
+N
Sbjct: 551 LN 552
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 294/550 (53%), Gaps = 17/550 (3%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
A + LE K +H Q ++ + ++ A+ + A+++F + +++
Sbjct: 339 AAETIDLEKGKEIHGCALQ---QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
V+W+A+ Q + + LF +M+ PN T +L +C ++ L+ G+ +HC
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCF 455
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K +++ GTAL+ +Y+ AA F M R++V W S+INGY GD +A
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515
Query: 186 RCLF------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTML 235
+F + P+ ++ +V + ++ + + + K D N ++
Sbjct: 516 IDMFYKLRLSAINPDAGTMV--GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573
Query: 236 SGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
YA G + + LF + ++ +WN +I Y NG E + +F +M E PN
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPN 632
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T V+VL A A L A H G+ N VGN+LIDMYAKCG ++ + +FN
Sbjct: 633 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFN 692
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
MD KD ++WN ++SG A+HG G A++LF M+ + D ++F+ +L AC H GLVEE
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEE 752
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G F SM+ Y I P +EHY CMVDLL RAG E + F+K MP+E DA +W LLGSC
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++ NV+L E+AL+ L +LEP+NPA+FV+LS+IY GRW D + + M D G KK PG
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872
Query: 535 CSSIEVNEVV 544
CS +E+ V
Sbjct: 873 CSWVELKNKV 882
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 229/469 (48%), Gaps = 13/469 (2%)
Query: 12 LETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
L + KHL+ QI Q++ SG + IT +I + + AR +FD + + + W
Sbjct: 39 LSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARSVFDSTPNPSRILW 97
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M Y +++ + + ++ M + P+ +TF VLK+C L+EG H + +
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDR 157
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA--- 185
G ++F+G L+++YS ++ A +VF +M +R+VV W +MI G D A
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 186 -RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW--NTMLSGYANNG 242
R + + E + + G + N+ R + + ++D S N ++ Y+ G
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCG 277
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
DV+ +R+F++M +++ SW ++ GYA+NG F EVL+ F +M G V N + V+
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM-KLGNVRINKVSAVSAF 336
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
A A L+ K +H A ++ V L+ MYAKCG E A +F + +DL+
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
W+ II+ L G ALSLF EM+N P+ +T + IL AC + L++ G S
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKS-IHCF 455
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + + +V + A+ G A+ RM D V W +L+
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLI 503
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 216/447 (48%), Gaps = 12/447 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
GLE+ +I ++ +++ + AR++FDK+ ++VV+WNAM G +Q+E V F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
M+ + P+ + + K++ + +H V + F + V LI+LYS
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKC 276
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-TIVSGY 207
++ A +VF +M +++ V W +M+ GY G V LF+ +V + + VS +
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 208 IDVRNMIEARK-------LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
+ I+ K Q D++ ++ YA G+ E+ K+LF + R++
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W+ +I G E L F+ M + ++ PN T++++L ACA L L K +H +
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQ-KMKPNRVTLMSILPACADLSLLKLGKSIHCF 455
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
++ G AL+ MYAKCG A+ FN M ++D++TWN++I+G A G A
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
+ +F++++ + PD T +G++ AC + +++G + + + ++D
Sbjct: 516 IDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALID 574
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIW 467
+ A+ G L A + D V W
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTW 601
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 280/521 (53%), Gaps = 66/521 (12%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFH-RTVVV 86
L+ + + R I AC+ L +YA +F IT ++ +N + + + H + +
Sbjct: 5 ALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIF 64
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
L+ ++ P+ ++FP LK+ + ++++ G +LH ++ G +++
Sbjct: 65 LYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLH---------- 114
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
V T+ + Y S G SG
Sbjct: 115 ---------------------VLTAFVQMYSSFG------------------------SG 129
Query: 207 YIDVRNMIEARKLFD--QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
I +ARK+FD M DV WN ML+GYA +GD+ + LFE MP+RNV SW
Sbjct: 130 CI-----CDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTA 184
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
LI GYA + + F+RM E V P++ ++ L+ACARLGAL+ +W+ Y +
Sbjct: 185 LITGYAQANRPHDAIALFRRMQLEN-VEPDEIAMLVALTACARLGALELGEWIRHYIDRL 243
Query: 325 GY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G N+ + NALIDMYAK G I++A+ VF +M+ K +ITW T+I+GLA+HG G AL +
Sbjct: 244 GLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEM 303
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F M+ A P+ ITFI IL AC+H+GLV+ G YF M Y I P+IEHYGCM+DLL
Sbjct: 304 FSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLG 363
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG L EA + +MP E +AVIW +LL +C + + EL ELAL+ L ELEP N N+ +
Sbjct: 364 RAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYAL 423
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LSNIY GRW + ++ M D G KK+PG S IEVN V
Sbjct: 424 LSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRV 464
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 288/520 (55%), Gaps = 33/520 (6%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
Y + + + SW ++Q + + L+ QM++ P+ F L++
Sbjct: 76 YVHSILYHLPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYA 135
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ G +H K GF ++V TAL++LYS + A KVF E+ E+NVV W S
Sbjct: 136 RTTYKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNS 195
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
+++G++ G+++ A+ +F+ ++DVI WN+++SGY + +M A LF QMP+K+ SW
Sbjct: 196 ILSGHLKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVLFQQMPEKNYSSW 255
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG-------LFFEV------ 278
N ++SGY N GD++ R F+ MPERN SW +I GY+ G LF ++
Sbjct: 256 NALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSASKLFDQIAKKDLL 315
Query: 279 ------------------LDAFKRMLTE-GRVFPNDATIVTVLSACARLGALDFSKWVHV 319
L F ML + P+ T+ +V+SAC++LG L F+ W+
Sbjct: 316 TFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQLGDLRFASWIES 375
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
Y G + + + AL+D+YAKCG ++ A ++F+ ++ KD++ ++ +ISG ++G+ A
Sbjct: 376 YVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSAMISGCGINGKVAD 435
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A+ LF M +A P+ TF G+L AC H GLV+EG +F SM D+ +VP +HY MV
Sbjct: 436 AIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMK-DHGLVPSTDHYAIMV 494
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAGRL +A + +K MP++ + +W LL +C V+ NVEL E+A + LE A
Sbjct: 495 DLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLETNATA 554
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ +L+NIY GRW DV R++ ++ KL GCS E
Sbjct: 555 YYSLLANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTE 594
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 78/185 (42%), Gaps = 6/185 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
QL + I++ V G E D + ++ A+ + A ++F + ++VV+++
Sbjct: 362 SQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYS 421
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM +G N + LF M PN TF +L +C ++EG + +
Sbjct: 422 AMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKDH 481
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIV 183
G + +++L ++ AY++ M + + VW ++ ++ + G+I
Sbjct: 482 GLVPSTDHYAIMVDLLGRAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIA 541
Query: 184 SARCL 188
+ C
Sbjct: 542 AQHCF 546
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 294/517 (56%), Gaps = 30/517 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ A+ M A ++F+++ ++NVVSWNAM +GY N + F M K D+
Sbjct: 158 MLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSA-- 215
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST--------GKAI 151
+ ++ ++ + L E E + +L+ G N+ G L++ Y+T G A
Sbjct: 216 --SLRALVSGLIQNDKLVEAERI---LLQYG--GNVGKGD-LVDAYNTLIAGYGQKGMAY 267
Query: 152 EAAYKVFGEM--------DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
EA K+F + RNV+ W SMI Y+ GDIVSAR LF+ ERD WNT+
Sbjct: 268 EAR-KLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTM 326
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
+SGY+ + +M EA LF +MP+ D +SWN M+SG++ G ++ LF+ +PE+++ SWN
Sbjct: 327 ISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWN 386
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I GY N + ++ F +M EG+ P+ T+ ++LSACA L L +H
Sbjct: 387 SMISGYEKNEDYKGAMNIFLQMQLEGKK-PDRHTLSSILSACAGLVDLVLGTQIHQLVT- 444
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALS 382
+ ++ + N+L+ MY++CG I A VF+ M+ +D+I+WN +I G A HG AL
Sbjct: 445 KAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQ 504
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF MK P ITFI +L AC H GL+EEG F SM + I PQ+EHY +VD++
Sbjct: 505 LFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDII 564
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
R G+L EA+ + MP E D +W LLG+C+V+ NVE+A A E L +L+P++ A +V
Sbjct: 565 GRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESSAPYV 624
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+L N+Y D+GRW D A ++ M +K G S ++
Sbjct: 625 LLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 209/480 (43%), Gaps = 127/480 (26%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ--NEFHRTVVVLFTQMKKLDA 96
R+ITA + ++M AR++F+++ ++++VSWN M +GY +F +F QM + D
Sbjct: 93 RMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETD- 151
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
CV N + G Y+ ++ A +
Sbjct: 152 -------------CVSWNTMLSG-------------------------YAKSGTMDKAEE 173
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD-------------------- 196
+F EM ERNVV W +M++GY+ G + A F+L P+RD
Sbjct: 174 LFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEA 233
Query: 197 ----------------VILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWN 232
V +NT+++GY EARKLFD++P +++VISWN
Sbjct: 234 ERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWN 293
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+M+ Y GD+ + LF++M ER+ FSWN +I GY ++LD M +F
Sbjct: 294 SMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYV------QILD----MKEASNLF 343
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
+R+ D W N +I +++ G ++ A D+
Sbjct: 344 -------------SRMPEPDTLSW-----------------NMMISGFSEIGSLKLAHDL 373
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F + K L++WN++ISG + GA+++F +M+ G+ PD T IL AC GLV
Sbjct: 374 FKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACA--GLV 431
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ L + + + + +V + +R G + EA M ++ D + W ++G
Sbjct: 432 DLVLGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIG 491
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 187/418 (44%), Gaps = 54/418 (12%)
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK----SCVKINALREGEELHCLVLKNG 130
++ FH + +F + P F K S K N+ + E + L K
Sbjct: 7 WSTKTFHAAALTVFNAQLQFHRRPVLFNIAFQFKQTCFSSSKANSF-QVPEFYSLNKKIS 65
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ L TG+ I A ++F + N + W MI Y+ +++ AR LFE
Sbjct: 66 Y------------LIRTGR-INEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFE 112
Query: 191 LAPERDVILWNTIVSGYIDV--RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
P RD++ WN ++SGYI + + AR +FDQMP+ D +SWNTMLSGYA +G +++ +
Sbjct: 113 EMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAE 172
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
LF EMPERNV SWN ++ GY NG + ++ FK M + A++ ++S
Sbjct: 173 ELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKR-----DSASLRALVS----- 222
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVG------NALIDMYAKCGIIENAVDVFNSM------ 356
G + K V Y GNV G N LI Y + G+ A +F+ +
Sbjct: 223 GLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDC 282
Query: 357 --DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+++I+WN++I G A LF +M D ++ ++ + ++E
Sbjct: 283 GYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVER----DTFSWNTMISGYVQILDMKE 338
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ F M P + M+ + G L A D KR+P E V W +++
Sbjct: 339 ASNLFSRMP-----EPDTLSWNMMISGFSEIGSLKLAHDLFKRIP-EKSLVSWNSMIS 390
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 155/351 (44%), Gaps = 29/351 (8%)
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N +S I + EAR+LFD + I+WN M++ Y ++ + ++LFEEMP R++
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120
Query: 261 SWNGLIGGYAN-NGLFFE-VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
SWN ++ GY + G F E + F +M V N T+LS A+ G +D K
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWN-----TMLSGYAKSGTMD--KAEE 173
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
++ E + NV NA++ Y G +E A++ F M +D + ++SGL + +
Sbjct: 174 LFNEMP--ERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLV 231
Query: 379 GALS-LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM----DYSIVPQIE 433
A L N G+ + ++ G+ E F + + YS I
Sbjct: 232 EAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVIS 291
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+ M+ RAG + A + +M +E D W ++ +++ A R+
Sbjct: 292 -WNSMIMCYVRAGDIVSARELFDKM-VERDTFSWNTMISGYVQILDMKEASNLFSRMP-- 347
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EP + +M+S + ++ +K+A FK++P S + N ++
Sbjct: 348 EPDTLSWNMMISG-------FSEIGSLKLA--HDLFKRIPEKSLVSWNSMI 389
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 283/506 (55%), Gaps = 39/506 (7%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R+IT + + A ++F+ +T + V+WN+M GY+ R + + Q+ P
Sbjct: 10 RVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSN---RRGKIKVARQLFDRIPEP 66
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ F++ I+L +C NA +E+A F
Sbjct: 67 DIFSYNIML-ACYLHNA----------------------------------DVESARLFF 91
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
+M ++ W +MI+G+ G + AR LF + P R+ + WN ++SGY++ ++ A++
Sbjct: 92 DQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQ 151
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LF+ P + V++W M++G+ G +E ++ FEEMP +N+ +WN +I GY N
Sbjct: 152 LFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENG 211
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L FKRM+ G PN +++ +VL C+ L AL K VH + N+ G +L+
Sbjct: 212 LKLFKRMVESG-FRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLS 270
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG +E+A +F M KD++TWN +ISG A HG G AL LF +M++ G PD IT
Sbjct: 271 MYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWIT 330
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC H G V+ G+ YF SM DY + + +HY C+VDLL R G+L EAVD +K+M
Sbjct: 331 FVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P + + I+ LLG+CR++KN+ELAE A + L L+P++ A +V L+N+Y + RW VA
Sbjct: 391 PFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVA 450
Query: 519 RIKVAMRDTGFKKLPGCSSIEVNEVV 544
++ +M+D K PG S IEV VV
Sbjct: 451 MVRRSMKDNKVIKTPGYSWIEVKSVV 476
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 152/336 (45%), Gaps = 43/336 (12%)
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC-GDIVSARCLFEL 191
+N+ +I + + +A +VF M + V W SM+ GY + G I AR LF+
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
PE D+ +N +++ Y+ ++ AR FDQMP KD SWNTM+SG++ NG +++ + LF
Sbjct: 63 IPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP RN SWN +I GY +G LD K++ + V S A
Sbjct: 123 LVMPVRNSVSWNAMISGYVESG----DLDLAKQLF----------EVAPVRSVVA----- 163
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
W A+I + K G IE A F M K+L+TWN +I+G
Sbjct: 164 ----WT-----------------AMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGY 202
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ + L LF M +G P+ + +L C+++ ++ G Q + +
Sbjct: 203 IENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQ-LICKSPVSWN 261
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
I ++ + + G L +A MP + D V W
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLFLVMP-QKDVVTW 296
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 155/375 (41%), Gaps = 89/375 (23%)
Query: 30 LEKSDYITPRIITAC-AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+ + D + I+ AC + AR FD++ ++ SWN M +G++QN LF
Sbjct: 63 IPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
MP +++ V NA+ G Y
Sbjct: 123 L------VMP--------VRNSVSWNAMISG-------------------------YVES 143
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI 208
++ A ++F R+VV WT+MI G++ G I A FE P ++++ WN +++GYI
Sbjct: 144 GDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYI 203
Query: 209 DVRNMIEARKLFDQMPK----------------------------------KDVISWN-- 232
+ KLF +M + K +SWN
Sbjct: 204 ENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNIT 263
Query: 233 ---TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
++LS Y GD+E+ +LF MP+++V +WN +I GYA +G + L F +M EG
Sbjct: 264 AGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEG 323
Query: 290 RVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
+ P+ T V VLSAC G +D F+ V Y CV +D+ + G
Sbjct: 324 -MKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCV----VDLLGRGG 378
Query: 345 IIENAVDVFNSMDTK 359
+ AVD+ M K
Sbjct: 379 KLVEAVDLIKKMPFK 393
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 291/514 (56%), Gaps = 18/514 (3%)
Query: 33 SDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMK 92
S YI R+I AR +F+ + ++NVVSW AM GY Q LF +M
Sbjct: 87 SGYIKNRMIVE---------ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 93 KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
+ N ++ ++ + + + +L+ ++ ++ T +I ++
Sbjct: 138 E----RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVD 189
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A +F EM ERNVV WT+MI GY + AR LFE+ PE+ + W +++ GY
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ +A + F+ MP K VI+ N M+ G+ G++ + +R+F+ M +R+ +W G+I Y
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERK 309
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G E LD F +M +G V P+ +++++LS CA L +L + + VH + + +V V
Sbjct: 310 GFELEALDLFAQMQKQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+ L+ MY KCG + A VF+ +KD+I WN+IISG A HG G AL +FHEM ++G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
MP+ +T I IL AC++ G +EEGL F+SM + + P +EHY C VD+L RAG++ +A+
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ ++ M I+ DA +W LLG+C+ + ++LAE+A ++L E EP N +V+LS+I
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRS 548
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+W DVA ++ MR K PGCS IEV + V +
Sbjct: 549 KWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHM 582
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 164/377 (43%), Gaps = 52/377 (13%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I+ +++ ++ ARK FD + + + SWN++ +GY N + LF +M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE------- 76
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
N+ L+ Y + I A VF
Sbjct: 77 --------------------------------RNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M ERNVV WT+M+ GY+ G + A LF PER+ + W + G ID + +ARKL+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D MP KDV++ M+ G G V+E + +F+EM ERNV +W +I GY N +D
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNR----VD 220
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALID 338
+++ V P T +S + L S + E+ V NA+I
Sbjct: 221 VARKLF---EVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
+ + G I A VF+ M+ +D TW +I G AL LF +M+ G P +
Sbjct: 274 GFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS 333
Query: 399 FIGILCACTHMGLVEEG 415
I IL C + ++ G
Sbjct: 334 LISILSVCATLASLQYG 350
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 45/281 (16%)
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
L GK I A K F + + + W S+++GY S G AR LF+ ER+V+ WN +
Sbjct: 27 LSRIGK-INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
VSGYI R ++EAR +F+ MP+++V+SW M+ GY G V E + LF MPERN SW
Sbjct: 86 VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWT 145
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+ GG ++G + + R + + V+++ +G L
Sbjct: 146 VMFGGLIDDG-----------RIDKARKLYDMMPVKDVVASTNMIGGL------------ 182
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ G ++ A +F+ M ++++TW T+I+G + R A L
Sbjct: 183 -----------------CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
F M E +++ +L T G +E+ +F+ M M
Sbjct: 226 FEVMPEKTE----VSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 94/258 (36%), Gaps = 50/258 (19%)
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+S + G + E ++ F+ + + + SWN ++ GY +NGL E F M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ NV N L+ Y K +I A +VF
Sbjct: 75 -------------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M +++++W ++ G G A SLF M E+ + F GL+++
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---------GGLIDD 154
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G D V + M+ L R GR+ EA M E + V W ++
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGY 213
Query: 475 RVYKNVELAELALERLTE 492
R V++A E + E
Sbjct: 214 RQNNRVDVARKLFEVMPE 231
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + ++ Q+ +V + Y+ ++T + ++ A+ +FD+ + ++++ WN++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GYA + + +F +M MPN T +L +C L EG E+ +
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM----- 458
Query: 132 RANIFVGTALIELYST-----GKA--IEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI- 182
+ F T +E YS G+A ++ A ++ M + + VW +++ + +
Sbjct: 459 -ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Query: 183 ---VSARCLFELAPE 194
V+A+ LFE P+
Sbjct: 518 LAEVAAKKLFENEPD 532
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 292/542 (53%), Gaps = 71/542 (13%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H L+T K H ++ +GL + + + I AC+ + YA +F N
Sbjct: 24 HGNNLKTLKQSH---CYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYL 80
Query: 68 WNAMFNGYA---QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
N M + + H + ++ ++ L A P+ FTFP VLK V+++ + G ++H
Sbjct: 81 HNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHG 140
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+ GF +++ V T LI++ Y SCG
Sbjct: 141 QVVVFGFDSSVHVVTGLIQM-------------------------------YFSCG---- 165
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+ +ARK+FD+M KDV WN +L+GY G++
Sbjct: 166 ---------------------------GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 245 EECKRLFEEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+E + L E MP RN SW +I GYA +G E ++ F+RML E V P++ T++ VL
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN-VEPDEVTLLAVL 257
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SACA LG+L+ + + Y ++ G V + NA+IDMYAK G I A+DVF ++ ++++
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TW TII+GLA HG GA AL++F+ M AG P+ +TFI IL AC+H+G V+ G F SM
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y I P IEHYGCM+DLL RAG+L EA + +K MP +A+A IW +LL + V+ ++EL
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E AL L +LEP N N+++L+N+Y +LGRW + ++ M+ G KK+ G SSIEV
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 543 VV 544
V
Sbjct: 498 RV 499
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 285/510 (55%), Gaps = 12/510 (2%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NA+ ++N + + + +M + P+ FT P+VLK+ I +REG+++H +K
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 129 NGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G N++V L+ LYS +I KVF E R++V WT++I + G A
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198
Query: 188 LF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGY 238
F +L D ++S ++ ++ +K+ + K DV N +L Y
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMY 258
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
D+ ++F+EMP +NV +WN +I G A G + E LD F RM+ + V P++ T+
Sbjct: 259 LKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTF-RMMQDKGVKPDEVTL 317
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V VL++CA LG L+ KWVH Y N + VGNAL+DMYAKCG I+ A VF SM
Sbjct: 318 VGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKR 377
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+D+ ++ +I GLA+HG A +F EM G P+ +TF+G+L AC+H GLV EG Y
Sbjct: 378 RDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKY 437
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F M+ Y + PQ EHYGCM+DLL RAG + EA + + +M I D LLG+CR++
Sbjct: 438 FFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHG 497
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
NV++ E +++LTEL+P +++++N+Y + RWKD +I+ M++ +K PGCS I
Sbjct: 498 NVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLI 557
Query: 539 EVNEVVM-LGCLSRELDRKSIVRAEANMIK 567
EV+ VV + R ++ A N+IK
Sbjct: 558 EVDGVVHEFRKGDKSHPRSKVIIANINLIK 587
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 174/371 (46%), Gaps = 18/371 (4%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H I+T +V + S+ + R+ + C + + +K+FD+ +++VSW + +
Sbjct: 133 HARSIKTGMVGFNVYVSNTLM-RLYSVCGSIHDV---QKVFDECPHRDLVSWTTLIQAFT 188
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANI 135
+ + V F +M L + T +VL +C + L G+++H + +A++
Sbjct: 189 KAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADV 248
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG AL+++Y + +AYKVF EM +NVV W +MI+G G A F + ++
Sbjct: 249 FVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDK 308
Query: 196 DV---------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
V +L + G +++ + A + + D N +L YA G ++E
Sbjct: 309 GVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHI-LADKFVGNALLDMYAKCGSIDE 367
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
R+FE M R+V+S+ +I G A +G F M G + PN+ T + +L AC+
Sbjct: 368 AFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVG-IEPNEVTFLGLLMACS 426
Query: 307 RLGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITW 364
G + + K+ ++ + +ID+ + G+++ A ++ + M+ + D+
Sbjct: 427 HGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFAC 486
Query: 365 NTIISGLAMHG 375
++ +HG
Sbjct: 487 GALLGACRIHG 497
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 318/572 (55%), Gaps = 12/572 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ T V+ SGL+ + ++ ++ ++ ++ A+ +FD + ++N VSWN+M G+ N
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNG 273
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF +M+ F V+K C I + ++LHC V+KNG ++ + T
Sbjct: 274 LDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT 333
Query: 140 ALIELYSTGKAIEAAYKVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
AL+ YS I+ A+K+F M +NVV WT++I+GY+ G A LF V
Sbjct: 334 ALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVR 393
Query: 198 ---ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLS-GYANNGDVEECKRLFEE 253
++TI++ V + + L + ++ S T LS Y+ GD E ++FE
Sbjct: 394 PNHFTYSTILTANAAV-SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFEL 452
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR-LGALD 312
+ E+++ +W+ ++ GYA G + F ++ EG V PN+ T +VL+ACA +++
Sbjct: 453 IDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEG-VEPNEFTFSSVLNACAAPTASVE 511
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K H + +G+ +CV +AL+ MYAK G IE+A +VF +DL++WN++ISG A
Sbjct: 512 QGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 571
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G +L +F EM++ DGITFIG++ ACTH GLV EG YF M DY IVP +
Sbjct: 572 QHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTM 631
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHY CMVDL +RAG L +A+D + +MP A A IW LL +CRV+ NV+L ELA E+L
Sbjct: 632 EHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLIS 691
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV---MLGCL 549
L+P++ A +V+LSNIY G W++ A+++ M KK G S IEV M G L
Sbjct: 692 LQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDL 751
Query: 550 SRELDRKSIVRAEANMIKLLPQNNHPLTFIVV 581
S + ++ E I+L +P T V+
Sbjct: 752 SHPQSDRIYLKLEELSIRLKDAGYYPDTKYVL 783
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 235/488 (48%), Gaps = 20/488 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q + G + + ++ + + + ++FD++ +NVVSW ++ GY QN
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF+QM+ PN FTF VL A+ +G ++H +V+K+G + IFVG
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+++ +YS + A VF M+ RN V W SMI G+++ G + A LF V L
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 200 WNTIVSGYI----DVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
TI + I +++ M A++L Q+ K D+ ++ Y+ ++++ +LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 252 EEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
M +NV SW +I GY NG ++ F +M EG V PN T T+L+A A +
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREG-VRPNHFTYSTILTANAAVSP 411
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+H Y+ + VG AL D Y+K G A +F +D KD++ W+ ++SG
Sbjct: 412 ----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSG 467
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH-MGLVEEGLSYFQSMAMDYSIV 429
A G GA+ +F ++ G P+ TF +L AC VE+G F S ++
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG-KQFHSCSIKSGFS 526
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+ +V + A+ G + A + KR ++ D V W +++ Y + +L+
Sbjct: 527 NALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISG---YAQHGCGKKSLKI 582
Query: 490 LTELEPKN 497
E+ KN
Sbjct: 583 FEEMRSKN 590
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 207/472 (43%), Gaps = 78/472 (16%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+++++FD+ Q + N + +++N+ ++ + LF +++ + + + VLK C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ G+++HC +K GF ++ VGT+L+++Y +++E +VF EM +NVV WTS
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 172 MINGYISCGDIVSARCLFE------LAP-------------------------------- 193
++ GY G A LF + P
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 194 -ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ + + N++V+ Y + +A+ +FD M ++ +SWN+M++G
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG--------------- 268
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ NGL E + F RM EG V TV+ CA + +
Sbjct: 269 ----------------FVTNGLDLEAFELFYRMRLEG-VKLTQTIFATVIKLCANIKEMS 311
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGL 371
F+K +H NG ++ + AL+ Y+KC I++A +F M +++++W IISG
Sbjct: 312 FAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGY 371
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+GR A++LF +M+ G P+ T+ IL A V + + +Y P
Sbjct: 372 VQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NAAVSPSQIHALVVKTNYENSPS 428
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ + D ++ G EA + + E D V W+ +L ++E A
Sbjct: 429 VG--TALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSGYAQMGDIEGA 477
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/641 (33%), Positives = 311/641 (48%), Gaps = 118/641 (18%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS------------- 67
+ V+ SG + +I R+I + YARK+FD+I +V++
Sbjct: 35 VHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGN 94
Query: 68 --------------------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
+NAM GY+ + + LF M+ + P+ FTF VL
Sbjct: 95 LKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVL 154
Query: 108 KSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELY---------STGKAIEAAYKV 157
+ I R+ ++H V+K G V AL+ +Y S+ + +A K+
Sbjct: 155 SASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKL 214
Query: 158 FGEMDERNVVVWTS-------------------------------MINGYISCGDIVSAR 186
F EM +RN +WT+ MI+GY+ G A
Sbjct: 215 FDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDAL 274
Query: 187 CLF-----------------------------------------ELAPERDVIL--WNTI 203
LF EL P+RD +L NT+
Sbjct: 275 TLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTL 334
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
++ Y + ARK+F +MP KD+I+WNT+LSGY N G +EE K F +MPE+N+ +W
Sbjct: 335 ITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWT 394
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G A NG + L F +M +G PND ++AC+ LGAL+ + +H +
Sbjct: 395 VMISGLAQNGFGEQALKLFNQMKLDGYE-PNDYAFAGAITACSVLGALENGRQLHAQIVH 453
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G+ + VGNA+I MYA+CGI+E A +F +M D ++WN++I+ L HG G A+ L
Sbjct: 454 LGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIEL 513
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
+ +M G +PD TF+ +L AC+H GLVEEG YF SM +Y I P +HY M+DL
Sbjct: 514 YEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFC 573
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+ ++A + + MP EA A IW LL CR + N++L A E+L +L P++ +V+
Sbjct: 574 RAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVL 633
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LSN+Y LGRW DVAR + MRD G KK P CS EV V
Sbjct: 634 LSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKV 674
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 10/222 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q+V G + + + +IT A+ + AR MF + + VSWN+M Q+
Sbjct: 446 QLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHG 505
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
+ L+ QM K +P+ TF VL +C + EG +L+N G
Sbjct: 506 HGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHY 565
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD----IVSARCLFELAP 193
+I+L+ A V M E +W +++ G + G+ I +A LF+L P
Sbjct: 566 ARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIP 625
Query: 194 ERD--VILWNTIVSGYIDVRNMIEARKLFDQ--MPKKDVISW 231
+ D +L + + + ++ RKL + K+ SW
Sbjct: 626 QHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSW 667
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 294/535 (54%), Gaps = 69/535 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
HL Q+Q+ ++ SGL S ++ +++ C +L ++YAR +FD+ + N + A+ Y
Sbjct: 39 HLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY 98
Query: 76 AQN-EFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+ + H + F ++ + PN F +P+VLKS +++ +H + K+GF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF- 157
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
LY VVV T++++ Y S
Sbjct: 158 ----------HLY--------------------VVVQTALLHSYAS-------------- 173
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
V ++ AR+LFD+M +++V+SW MLSGYA +GD+ LFE
Sbjct: 174 ----------------SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+MPER+V SWN ++ NGLF E + F+RM+ E + PN+ T+V VLSACA+ G L
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQ 277
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+K +H +A +V V N+L+D+Y KCG +E A VF K L WN++I+ A
Sbjct: 278 LAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 373 MHGRGAGALSLFHEMK--NAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+HGR A+++F EM N ++ PD ITFIG+L ACTH GLV +G YF M + I
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+IEHYGC++DLL RAGR EA++ + M ++AD IW +LL +C+++ +++LAE+A++
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
L L P N M++N+YG++G W++ R + ++ K PG S IE+ NEV
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEV 512
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 280/483 (57%), Gaps = 9/483 (1%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVS+ ++ GY ++ + LF QM + N ++ ++L + + E +L
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIQLFRQMPER----NHISYTVLLGGFLDAGRVDEARKL- 165
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
++ TA++ Y ++ A +F EM +RNVV WT+M++GY G +
Sbjct: 166 ---FDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVN 222
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
AR LFE+ PER+ + W ++ GYI + +A +LF+ MP + + N M+ G+ G
Sbjct: 223 LARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGM 282
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+ K +F+ M ER+ +W+ +I Y N E L F+ ML G + PN +++++L+
Sbjct: 283 VDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIG-IRPNYPSVISILT 341
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
CA L LD+ + VH + ++ +ALI MY KCG ++ A VF+ + KD++
Sbjct: 342 VCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVM 401
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+G A HG G AL +F +M+ AG +PDGIT+IG L AC++ G V+EG F SM
Sbjct: 402 WNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMR 461
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
I P +EHY CMVDLL RAG + EA+ +K MP+E DAVIW L+G+CR++KN E+A
Sbjct: 462 TKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIA 521
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E++ ++L ELEP N +V+LS+IY GRW+D + ++ + K GCS IE ++
Sbjct: 522 EISAKKLLELEPGNAGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKR 581
Query: 544 VML 546
V L
Sbjct: 582 VHL 584
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 157/382 (41%), Gaps = 93/382 (24%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ Q+ ++ AR +FD++ +NVVSW AM +GYAQN LF M + N
Sbjct: 180 MLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPER----N 235
Query: 100 CFTFPIVLKSCVKINALREGEEL------HCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
++ +L ++ + + EEL H L NG + VG + ++A
Sbjct: 236 EVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNG----MIVG------FGQQGMVDA 285
Query: 154 AYKVFGEMDERNVVVWTSMINGY----------------------------ISCGDIVSA 185
A VF M ER+ W+++I Y IS + +A
Sbjct: 286 AKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAA 345
Query: 186 RCLFELAPE-----------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
+ + E D+ + +++ YI N+ +A+++F KDV+ WN+M
Sbjct: 346 LAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSM 405
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++GYA +G EE +F++M G++ P+
Sbjct: 406 ITGYAQHGLGEEALHIFDDM------RLAGMV--------------------------PD 433
Query: 295 DATIVTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
T + L+AC+ G + + + + +G + + ++D+ + G+++ A+ +
Sbjct: 434 GITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLI 493
Query: 354 NSMDTK-DLITWNTIISGLAMH 374
+M + D + W ++ MH
Sbjct: 494 KTMPVEPDAVIWGALMGACRMH 515
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 37/337 (10%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE--ARKLFDQMPKKDVISWNTMLSG 237
G++ AR FE P R +N +++GY RN + A ++F +MP +D+ S+N ++SG
Sbjct: 31 GNMEGARATFEAMPLRTTASYNALLAGYF--RNHLPDAALRVFHRMPTRDLASYNALISG 88
Query: 238 YA-NNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ + + +P +V S+ L+ GY +GL + + F++M N
Sbjct: 89 LSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPER-----NH 143
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
+ +L G +D ++ ++ E +V A++ Y + G ++ A +F+
Sbjct: 144 ISYTVLLGGFLDAGRVDEAR--KLFDEMPA--KDVVAWTAMLSGYCQVGRVDEARTLFDE 199
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
M +++++W ++SG A +G+ A LF M E +++ +L G +E+
Sbjct: 200 MPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNE----VSWTAMLFGYIQAGRIEDA 255
Query: 416 LSYFQSMAMDYSIVPQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
F +M P C M+ + G + A RM E D W+ ++
Sbjct: 256 EELFNAM-------PDHPLAACNGMIVGFGQQGMVDAAKSVFDRM-CERDDGTWSAII-- 305
Query: 474 CRVYKNVELAELALERLTEL-----EPKNPANFVMLS 505
+ Y+ E AL E+ P P+ +L+
Sbjct: 306 -KAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILT 341
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 33/252 (13%)
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
V+ N ++ A G++E + FE MP R S+N L+ GY N L L F RM T
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 288 EGRVFPNDATIVTVLS--------ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
R + +++ LS A A L + Y +V +L+
Sbjct: 77 --RDLASYNALISGLSLRRHTLPDAAAALATIP-------------YPPSVVSFTSLLRG 121
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y + G++ +A+ +F M ++ I++ ++ G GR A LF EM D + +
Sbjct: 122 YVRHGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAK----DVVAW 177
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+L +G V+E + F M + + MV A+ G++ A + MP
Sbjct: 178 TAMLSGYCQVGRVDEARTLFDEMPKR-----NVVSWTAMVSGYAQNGQVNLARKLFEVMP 232
Query: 460 IEADAVIWANLL 471
E + V W +L
Sbjct: 233 -ERNEVSWTAML 243
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y +IT + + A+++F ++VV WN+M GYAQ+ + +F M+
Sbjct: 369 YAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLA 428
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
+P+ T+ L +C ++EG ++ + + K+G + + +++L ++
Sbjct: 429 GMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDE 488
Query: 154 AYKVFGEMD-ERNVVVWTSMI-------NGYISCGDIVSARCLFELAP 193
A + M E + V+W +++ N I+ +SA+ L EL P
Sbjct: 489 ALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAE---ISAKKLLELEP 533
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 305/535 (57%), Gaps = 9/535 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV+SGLE + ++ A+ + AR++FD + ++V+WN M +GY QN
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F LF +M P+ TF L + LR+G+E+HC +++NG ++F+ +
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-LAPER--- 195
ALI++Y + +E A K+F + ++VV T+MI+GY+ G +A +F L ER
Sbjct: 389 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
+ + +++ + + ++L + K + ++ YA G ++ + F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 508
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ +++ WN +I + NG E +D F++M G + + +I LSACA L AL
Sbjct: 509 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKY-DCVSISAALSACANLPAL 567
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H + ++ ++ +ALIDMY+KCG ++ A VF++M+ K+ ++WN+II+
Sbjct: 568 HYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAY 627
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HGR +L+LFH M G PD +TF+ I+ AC H G V+EG+ YF+ M + I+ +
Sbjct: 628 GNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMAR 687
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY CMVDL RAGRL EA + MP DA +W LLG+CR++ NVELAE+A L
Sbjct: 688 MEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF 747
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+L+P+N +V+LSN++ + G+W+ V +I+ M++ G +K+PGCS I+VN +
Sbjct: 748 DLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHM 802
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 239/518 (46%), Gaps = 45/518 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ ++ G E ++ +I ++ + AR +FD++ ++ V WN M NGY +N
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+F +M++ + PN TF VL C + G +LH LV+ +G + V
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPER---D 196
L+ +Y+ + A ++F M + ++V W MI+GY+ G + A CLF E+ R D
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFE 252
I +++ + + + + +++ + + DV + ++ Y DVE +++F+
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ ++ +I GY NG+ L+ F+ +L E R+ N T+ +VL ACA L AL
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE-RMRANSVTLASVLPACAGLAALT 467
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H + NG+ G+ VG+A++DMYAKCG ++ A F + KD + WN++I+ +
Sbjct: 468 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 527
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+G+ A+ LF +M AG D ++ L AC ++ P +
Sbjct: 528 QNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANL--------------------PAL 567
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
HYG E F+ R +D + L+ +Y +LA
Sbjct: 568 -HYG------------KEIHAFMMRGAFRSDLFAESALI---DMYSKCGNLDLACRVFDT 611
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+E KN ++ + YG+ GR KD + M G +
Sbjct: 612 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQ 649
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 210/502 (41%), Gaps = 89/502 (17%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q++ +G+ + + +++ A+ +F ++ WN M G+
Sbjct: 67 QAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMG 126
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ + +M +P+ +TFP V+K+C +N++ G +H + GF ++FVG+
Sbjct: 127 QFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGS 186
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
+LI+ YS I A +F M ++ V+W M+NGY+ GD +A +F E P
Sbjct: 187 SLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNP 246
Query: 194 ---------------------------------ERDVILWNTIVSGYIDVRNMIEARKLF 220
E D + NT+++ Y ++ +AR+LF
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLF 306
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D MPK D+++WN M+SGY NG ++E LF EM
Sbjct: 307 DMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM-------------------------- 340
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
R+ P+ T + L + L K +H Y NG +V + +ALID+Y
Sbjct: 341 ------ISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIY 394
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
KC +E A +F+ D++ +ISG ++G AL +F + + +T
Sbjct: 395 FKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 454
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV-----DLLARAGRLAEAVDFV 455
+L AC + + G + I+ C V D+ A+ GRL D
Sbjct: 455 SVLPACAGLAALTLG------KELHGHILKNGHGGSCYVGSAIMDMYAKCGRL----DLA 504
Query: 456 KRMPI---EADAVIWANLLGSC 474
+ I + DAV W +++ SC
Sbjct: 505 HQTFIGISDKDAVCWNSMITSC 526
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 182/374 (48%), Gaps = 15/374 (4%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T + +I ++ +G+ ++ +I + + + ARK+FD+ T ++V AM +
Sbjct: 364 TLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMIS 423
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GY N + + +F + + N T VL +C + AL G+ELH +LKNG
Sbjct: 424 GYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGG 483
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--- 190
+ +VG+A++++Y+ ++ A++ F + +++ V W SMI G A LF
Sbjct: 484 SCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMG 543
Query: 191 -LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVE 245
+ D + + +S ++ + +++ M + D+ + + ++ Y+ G+++
Sbjct: 544 MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLD 603
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
R+F+ M E+N SWN +I Y N+G + L+ F ML +G + P+ T + ++SAC
Sbjct: 604 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISAC 662
Query: 306 ARLGALDFSKWVHVY---AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDL 361
G +D + +H + E G + ++D++ + G + A + NSM + D
Sbjct: 663 GHAGQVD--EGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA 720
Query: 362 ITWNTIISGLAMHG 375
W T++ +HG
Sbjct: 721 GVWGTLLGACRLHG 734
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 143/338 (42%), Gaps = 73/338 (21%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L++C + L +G + H +L NG N +GT L+ +Y A A +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 166 VVVWTSMINGY----------------------------------------ISCGDIVSA 185
W MI G+ ++ G +V
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+ F + E DV + ++++ Y + + +AR LFD+MP KD + WN ML+GY NGD +
Sbjct: 172 KIQF-MGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+F EM +R T PN T VLS C
Sbjct: 231 NATGVFMEM----------------------------RRTETN----PNSVTFACVLSVC 258
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A ++F +H +G + + V N L+ MYAKCG + +A +F+ M DL+TWN
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWN 318
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
+ISG +G A LFHEM +A PD ITF L
Sbjct: 319 GMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFL 356
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+V++L C L + H NG N +G L+ MY CG +A ++F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL- 416
WN +I G M G+ AL + +M G +PD TF ++ AC + V G
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 417 --SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
Q M + + ++ + G + +A RMP D V+W +L
Sbjct: 169 VHDKIQFMGFELDVFVG----SSLIKFYSENGCIHDARYLFDRMP-SKDGVLWNVML 220
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 293/550 (53%), Gaps = 17/550 (3%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
A + LE K +H Q ++ + ++ A+ + A+++F + +++
Sbjct: 339 AAETIDLEKGKEIHGCALQ---QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDL 395
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
V+W+A+ Q + + LF +M+ PN T +L +C ++ L+ G+ +HC
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCF 455
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K +++ GTAL+ +Y+ AA F M R++V W S+INGY GD +A
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515
Query: 186 RCLF------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTML 235
+F + P+ ++ +V + ++ + + + K D N ++
Sbjct: 516 IDMFYKLRLSAINPDAGTMV--GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALI 573
Query: 236 SGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
YA G + + LF + ++ +WN +I Y NG E + +F +M E PN
Sbjct: 574 DMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN-FHPN 632
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T V+VL A A L A H G+ N VGN+LIDMYAKCG + + +FN
Sbjct: 633 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFN 692
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
MD KD ++WN ++SG A+HG G A++LF M+ + D ++F+ +L AC H GLVEE
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEE 752
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G F SM+ Y I P +EHY CMVDLL RAG E + F+K MP+E DA +W LLGSC
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++ NV+L E+AL+ L +LEP+NPA+FV+LS+IY GRW D + + M D G KK PG
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872
Query: 535 CSSIEVNEVV 544
CS +E+ V
Sbjct: 873 CSWVELKNKV 882
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 229/469 (48%), Gaps = 13/469 (2%)
Query: 12 LETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
L + KHL+ QI Q++ SG + IT +I + + AR +FD + + + W
Sbjct: 39 LSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARSVFDSTPNPSRILW 97
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M Y +++ + + ++ M + P+ +TF VLK+C L+EG H + +
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDR 157
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA--- 185
G ++F+G L+++YS ++ A +VF +M +R+VV W +MI G D A
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 186 -RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW--NTMLSGYANNG 242
R + + E + + G + N+ R + + ++D S N ++ Y+ G
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCG 277
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
DV+ +R+F++M +++ SW ++ GYA+NG F EVL+ F +M G V N + V+
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM-KLGNVRINKVSAVSAF 336
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
A A L+ K +H A ++ V L+ MYAKCG E A +F + +DL+
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
W+ II+ L G ALSLF EM+N P+ +T + IL AC + L++ G S
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKS-IHCF 455
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + + +V + A+ G A+ RM D V W +L+
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLI 503
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 216/447 (48%), Gaps = 12/447 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
GLE+ +I ++ +++ + AR++FDK+ ++VV+WNAM G +Q+E V F
Sbjct: 159 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFF 218
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
M+ + P+ + + K++ + +H V + F + V LI+LYS
Sbjct: 219 RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKC 276
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-TIVSGY 207
++ A +VF +M +++ V W +M+ GY G V LF+ +V + + VS +
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 208 IDVRNMIEARK-------LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
+ I+ K Q D++ ++ YA G+ E+ K+LF + R++
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W+ +I G E L F+ M + ++ PN T++++L ACA L L K +H +
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQ-KMKPNRVTLMSILPACADLSLLKLGKSIHCF 455
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
++ G AL+ MYAKCG A+ FN M ++D++TWN++I+G A G A
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
+ +F++++ + PD T +G++ AC + +++G + + + ++D
Sbjct: 516 IDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIVKLGFESDCHVKNALID 574
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIW 467
+ A+ G L A + D V W
Sbjct: 575 MYAKCGSLPSAEFLFNKTDFTKDEVTW 601
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 303/512 (59%), Gaps = 17/512 (3%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL--DAMP 98
I+A A+ + AR++FD +T ++VVSWNA+ + H ++L +AMP
Sbjct: 22 ISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHH-----LPAARRLFDEAMP 76
Query: 99 --NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE-LYSTGKAIEAAY 155
+ ++ ++ C+ L N+ A++ L G+ ++A
Sbjct: 77 SRDVVSWNSIIAGCLAHGDLDAASAY----FAGAPERNVATWNAMLAGLVRLGRVVDA-Q 131
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
++F EM ERNVV +T+M++ G++ AR +F+ P+R+++ W ++SG ++ +E
Sbjct: 132 RLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVE 191
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR+LF+ MP+K+V++ M++G+ GDV+ +RLF+ + ++V SWN +I GY +NG
Sbjct: 192 ARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHG 251
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E + M EG V P+ AT++ VL+AC+ L L K H A + + NA
Sbjct: 252 EEAMRLHALMFREG-VKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNA 310
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+ MY+KCG + + VF ++ TKD+++WNTII+ A HG+ ++LFHEM+ G +PD
Sbjct: 311 LMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIPD 370
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITF+ +L AC H+G+V+ L F M+ Y+I P+ EHY C+VD+L+RAG+L +A ++
Sbjct: 371 DITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYI 430
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
K MP++A+ +W +LLG+C+++ NV+L ELA + L + + ++ +V+LSNIY G W
Sbjct: 431 KHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAAGMWG 490
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEV-NEVVML 546
V +I+ M++ G KK PG S E+ NEV M
Sbjct: 491 QVNQIRGQMKERGVKKQPGYSWTEIGNEVHMF 522
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 163/384 (42%), Gaps = 95/384 (24%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN-EFHRTVVVLFTQMKKLDAMP 98
++ +L ++ A+++FD++ ++NVVS+ M + A+ E R V D+MP
Sbjct: 117 MLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREV-------FDSMP 169
Query: 99 --NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
N ++ ++ CV+ E EL
Sbjct: 170 DRNLVSWAAMISGCVENGMFVEAREL---------------------------------- 195
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
F M E+NVV T+MI G+ GD+ SAR LF+ +DVI WN +++GY+ + EA
Sbjct: 196 -FEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEA 254
Query: 217 RKLFDQMPKKDV--------------------------------------ISW-NTMLSG 237
+L M ++ V IS+ N +++
Sbjct: 255 MRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTM 314
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G+V E + +F + +++ SWN +I YA +G + +V+ F M G + P+D T
Sbjct: 315 YSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTG-LIPDDIT 373
Query: 298 IVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
++VLSAC +G +D F YA + C+ +D+ ++ G +E A
Sbjct: 374 FLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACI----VDILSRAGQLEKASSY 429
Query: 353 FNSMDTK-DLITWNTIISGLAMHG 375
M K + W +++ +HG
Sbjct: 430 IKHMPLKAEKNVWGSLLGACQIHG 453
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 20/258 (7%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ +IT + + AR++FD I ++V+SWNAM GY N + L
Sbjct: 201 EKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHAL 260
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + P+ T VL +C + LR+G+ H + +K + I AL+ +YS
Sbjct: 261 MFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGN 320
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIV 204
+ + VF + +++V W ++I Y G LF L P+ L
Sbjct: 321 VGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSA 380
Query: 205 SGYIDVRNMIEAR-KLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP--- 255
G++ M++A KLFD M K IS + ++ + G +E+ + MP
Sbjct: 381 CGHV---GMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKHMPLKA 437
Query: 256 ERNVFSWNGLIGGYANNG 273
E+NV W L+G +G
Sbjct: 438 EKNV--WGSLLGACQIHG 453
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY--ANNGDVEECKRLFE 252
R ++ N +S ++ AR++FD M +DV+SWN +L+ A + +RLF+
Sbjct: 13 RRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFD 72
Query: 253 E-MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG-A 310
E MP R+V SWN +I G +G LDA G N AT +L+ RLG
Sbjct: 73 EAMPSRDVVSWNSIIAGCLAHG----DLDAASAYFA-GAPERNVATWNAMLAGLVRLGRV 127
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+D + E NV ++D A+ G +E A +VF+SM ++L++W +ISG
Sbjct: 128 VDAQRLFDEMPER-----NVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISG 182
Query: 371 LAMHGRGAGALSLFHEM 387
+G A LF M
Sbjct: 183 CVENGMFVEARELFEAM 199
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +S A GDV +R+F+ M R+V SWN L+ G L A +R+ E
Sbjct: 19 NQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHH--LPAARRLFDEAMP 76
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAV 350
+ + ++++ C G LD + A + G + NV NA++ + G + +A
Sbjct: 77 SRDVVSWNSIIAGCLAHGDLDAAS-----AYFAGAPERNVATWNAMLAGLVRLGRVVDAQ 131
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG--ITFIGILCACTH 408
+F+ M ++++++ T++ LA G A +F MPD +++ ++ C
Sbjct: 132 RLFDEMPERNVVSYTTMVDWLARRGEVERAREVF------DSMPDRNLVSWAAMISGCVE 185
Query: 409 MGLVEEGLSYFQSM 422
G+ E F++M
Sbjct: 186 NGMFVEARELFEAM 199
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 126/310 (40%), Gaps = 53/310 (17%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K H I + + LE + ++T ++ + + +F + +++VSWN +
Sbjct: 286 LRQGKSTHAIAIKAM---LESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTI 342
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-- 129
YAQ+ ++ V+ LF +M+ +P+ TF VL +C + + +L L+
Sbjct: 343 IAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYA 402
Query: 130 -GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD---ERNVVVWTSMINGYISCGDIVSA 185
RA + ++++ S +E A M E+N VW S++ G++
Sbjct: 403 ISPRAEHY--ACIVDILSRAGQLEKASSYIKHMPLKAEKN--VWGSLLGACQIHGNVQ-- 456
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
L ELA + V + Y+ + N+ YA G
Sbjct: 457 --LGELAAKMLVQSDSQSSGPYVILSNI------------------------YAAAGMWG 490
Query: 246 ECKRLFEEMPERNV-----FSWNGL-------IGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+ ++ +M ER V +SW + +GG A++ +++ +++ R+
Sbjct: 491 QVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVGGDASHPEMRKIISELRKISFHMRMVT 550
Query: 294 NDATIVTVLS 303
N+A I+ L+
Sbjct: 551 NEAHIMVELA 560
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 189/487 (38%), Positives = 269/487 (55%), Gaps = 19/487 (3%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN A+ + L+ QM + PN FTFP LKSC ++ G + H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSA 185
K G FV T LI +Y G ++ A KVF E + V + ++++GY+S A
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 186 RCLFELAPERDVILWNTIVSGYI---------DVRNMIEARKL---FDQMPKKDVISWNT 233
LF E V + + + G I ++ + + L FD DV N
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDS----DVSVVNC 192
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++ Y G V ++LF+EMP + + SWN ++ GYA NGL VL+ ++ M G V P
Sbjct: 193 FITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNG-VHP 251
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ T+V VLS+CA LGA V + +G+ N + NALI+MYA+CG + A VF
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
+ M + L++W II G MHG G A+ LF EM +G PDG F+ +L AC+H GL +
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+GL YF+ M +Y + P EHY CMVDLL RAGRL EA ++ MPI+ D +W LLG+
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
C+++KNVELAELA ER+ ELEP+N +V+LSNIY + K V RI++ M++ KK P
Sbjct: 432 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491
Query: 534 GCSSIEV 540
GCS +E+
Sbjct: 492 GCSYVEL 498
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 166/373 (44%), Gaps = 25/373 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYAQ 77
Q Q+ G ++ +I+ + + ARK+F++ + + V +NA+ +GY
Sbjct: 70 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N V+LF QM + N T ++ +CV L G LHC LK GF +++ V
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------L 191
I +Y ++ A K+F EM + ++ W +M++GY G + L+ +
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249
Query: 192 APERDVILWNTIVS----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
P+ V L + S G V + +E + ++ N +++ YA G++ +
Sbjct: 250 HPD-PVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLN-NALINMYARCGNLTKA 307
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F+ MPER + SW +IGGY +G + FK M+ G + P+ V VLSAC+
Sbjct: 308 QAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG-IEPDGTAFVCVLSACSH 366
Query: 308 LGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DL 361
G D F Y G + C ++D+ + G ++ A + SM K D
Sbjct: 367 AGLTDQGLEYFKMMKRNYQLEPGPEHYSC----MVDLLGRAGRLKEAQTLIESMPIKPDG 422
Query: 362 ITWNTIISGLAMH 374
W ++ +H
Sbjct: 423 AVWGALLGACKIH 435
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
H+++ ++ SG + ++ +I A+ +T A+ +FD + ++ +VSW A+ GY +
Sbjct: 273 HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 332
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
V LF +M + P+ F VL +C +G E ++ +N
Sbjct: 333 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN 383
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 278/524 (53%), Gaps = 82/524 (15%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC----FTFPIVLKSCVKINALREG 119
NV+ + G+ ++ H LF +M L A C T LKSC ++ AL G
Sbjct: 87 NVLMRAFLHAGHPEDALH-----LFIEM--LHAASACPADQHTAACALKSCSRMCALDVG 139
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+ +K G A+ FV ++LI +Y+ SC
Sbjct: 140 RGVQAYAVKRGLVADRFVLSSLIHMYA-------------------------------SC 168
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYID----------VRNMIEARKLFDQMPKKDVI 229
GD+ +AR +F+ A E V++WN IV+ Y+ + M+E FD++ V+
Sbjct: 169 GDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVV 228
Query: 230 S------------W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVF 260
+ W ++ YA G++ + +RLF+ M R+V
Sbjct: 229 TACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVV 288
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W+ +I GY E L F M RV PND T+V+VLSACA LGAL+ KWVH Y
Sbjct: 289 AWSAMISGYTQADQCREALGLFSEMQL-ARVEPNDVTMVSVLSACAVLGALETGKWVHSY 347
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+G AL+D YAKCG I++AV+ F SM K+ TW +I G+A +GRG A
Sbjct: 348 VRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREA 407
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L LF M+ AG P +TFIG+L AC+H LVEEG +F SMA DY I P++EHYGCMVD
Sbjct: 408 LELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVD 467
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG + EA F++ MPIE +AVIW LL SC V++NV + E AL+++ L P + +
Sbjct: 468 LLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGD 527
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+LSNIY G+WKD A ++ M+D G +K PGCS IE++ VV
Sbjct: 528 YVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVV 571
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 23/370 (6%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+Q V GL ++ +I A + AR +FD + VV WNA+ Y +N
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
VV +F M ++ + T V+ +C +I + G+ + V + G N + TA
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPER---- 195
L+++Y+ I A ++F M R+VV W++MI+GY A LF E+ R
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPN 321
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG-----YANNGDVEECKRL 250
DV + + + + V +E K ++ +S T+L YA G +++
Sbjct: 322 DVTMVSVLSA--CAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL-- 308
FE MP +N ++W LI G A NG E L+ F M G + P D T + VL AC+
Sbjct: 380 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAG-IEPTDVTFIGVLMACSHSCL 438
Query: 309 ---GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITW 364
G F Y G + V ++D+ + G+++ A +M + + + W
Sbjct: 439 VEEGRRHFDSMARDY----GIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIW 494
Query: 365 NTIISGLAMH 374
++S A+H
Sbjct: 495 RALLSSCAVH 504
>gi|147846621|emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
Length = 496
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/395 (44%), Positives = 258/395 (65%), Gaps = 2/395 (0%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
T+P V+K+C + + G +H V K+GF + ++ ++LI LY+ GK + AA ++F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHV-KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNL 59
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+R++V W +MI+GY+ G++ AR +F+ RDVI WNT+++GY V + EA++LF
Sbjct: 60 CSDRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLF 119
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D+MP+++++S N+ML G+ G+VE+ LF EMP R+V SWN ++ YA G E L
Sbjct: 120 DEMPERNLVSXNSMLXGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 179
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F +M G V P++AT+V++LSACA LGALD +H Y N + N VG AL+DMY
Sbjct: 180 LFDQMXAVG-VKPSEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 238
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
AKCG I A VFN+M++KD++ WNTII+G+A+ G A LF EMK AG P+ ITF+
Sbjct: 239 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFV 298
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC+H G+V+EG M+ Y I P++EHYGC++DLLARAG L EA++ + MP+
Sbjct: 299 AMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPM 358
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
E + LLG CR++ N EL E+ +RL L+P
Sbjct: 359 EPNPCALGALLGGCRIHGNFELGEMVGKRLINLQP 393
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 163/391 (41%), Gaps = 81/391 (20%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
V SG E YI +I A K + A+++F+ +D+++VSWNAM +GY +
Sbjct: 26 VKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSDRDLVSWNAMIDGYVKRGEMGHAR 85
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
++F +M V + + N + G Y
Sbjct: 86 MVFDRM--------------VCRDVISWNTMING-------------------------Y 106
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ I+ A ++F EM ERN+V SM+ G++ CG++ A LF P RDV+ WN++++
Sbjct: 107 AIVGKIDEAKRLFDEMPERNLVSXNSMLXGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLA 166
Query: 206 GYIDVRNMIEARKLFDQMPKKDV------------------------------------- 228
Y EA LFDQM V
Sbjct: 167 CYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLSACAHLGALDKGLHLHTYINDNRIEV 226
Query: 229 --ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
I ++ YA G + ++F M ++V +WN +I G A G E FK M
Sbjct: 227 NSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEM- 285
Query: 287 TEGRVFPNDATIVTVLSACARLGALD-FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
E V PND T V +LSAC+ G +D K + + G + V +ID+ A+ G+
Sbjct: 286 KEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGL 345
Query: 346 IENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+E A+++ +M + + ++ G +HG
Sbjct: 346 LEEAMELIGTMPMEPNPCALGALLGGCRIHG 376
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+F ++ ++VVSWN+M YAQ + LF QM + P+ T +L +C + A
Sbjct: 149 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLSACAHLGA 208
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L +G LH + N N VGTAL+++Y+ I A +VF M+ ++V+ W ++I G
Sbjct: 209 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 268
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KK 226
G + A+ LF E E + I + ++S + E +KL D M +
Sbjct: 269 MAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEP 328
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLF 275
V + ++ A G +EE L MP E N + L+GG +G F
Sbjct: 329 KVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNF 378
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH L+ HLH T + + +E + + ++ A+ +++ A ++F+ + ++V+
Sbjct: 204 AHLGALDKGLHLH---TYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 260
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCL 125
+WN + G A + LF +MK+ PN TF +L +C + EG++ L C+
Sbjct: 261 AWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 320
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISC 179
G + +I+L + +E A ++ G M E N ++ I+G
Sbjct: 321 SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFEL 380
Query: 180 GDIVSARCLFELAP 193
G++V R L L P
Sbjct: 381 GEMVGKR-LINLQP 393
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/487 (38%), Positives = 269/487 (55%), Gaps = 19/487 (3%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN A+ + L+ QM + PN FTFP LKSC ++ G + H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSA 185
K G FV T LI +Y G ++ A KVF E + V + ++++GY+S A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 186 RCLFELAPERDVILWNTIVSGYI---------DVRNMIEARKL---FDQMPKKDVISWNT 233
LF E V + + + G I ++ + + L FD DV N
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDS----DVSVVNC 183
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++ Y G V ++LF+EMP + + SWN ++ GYA NGL VL+ ++ M G V P
Sbjct: 184 FITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNG-VHP 242
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ T+V VLS+CA LGA V + +G+ N + NALI+MYA+CG + A VF
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
+ M + L++W II G MHG G A+ LF EM +G PDG F+ +L AC+H GL +
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+GL YF+ M +Y + P EHY CMVDLL RAGRL EA ++ MPI+ D +W LLG+
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
C+++KNVELAELA ER+ ELEP+N +V+LSNIY + K V RI++ M++ KK P
Sbjct: 423 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482
Query: 534 GCSSIEV 540
GCS +E+
Sbjct: 483 GCSYVEL 489
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 166/373 (44%), Gaps = 25/373 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYAQ 77
Q Q+ G ++ +I+ + + ARK+F++ + + V +NA+ +GY
Sbjct: 61 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 120
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N V+LF QM + N T ++ +CV L G LHC LK GF +++ V
Sbjct: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------L 191
I +Y ++ A K+F EM + ++ W +M++GY G + L+ +
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240
Query: 192 APERDVILWNTIVS----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
P+ V L + S G V + +E + ++ N +++ YA G++ +
Sbjct: 241 HPD-PVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLN-NALINMYARCGNLTKA 298
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F+ MPER + SW +IGGY +G + FK M+ G + P+ V VLSAC+
Sbjct: 299 QAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSG-IEPDGTAFVCVLSACSH 357
Query: 308 LGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DL 361
G D F Y G + C ++D+ + G ++ A + SM K D
Sbjct: 358 AGLTDQGLEYFKMMKRNYQLEPGPEHYSC----MVDLLGRAGRLKEAQTLIESMPIKPDG 413
Query: 362 ITWNTIISGLAMH 374
W ++ +H
Sbjct: 414 AVWGALLGACKIH 426
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
H+++ ++ SG + ++ +I A+ +T A+ +FD + ++ +VSW A+ GY +
Sbjct: 264 HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMH 323
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
V LF +M + P+ F VL +C +G E ++ +N
Sbjct: 324 GHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN 374
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/511 (36%), Positives = 295/511 (57%), Gaps = 35/511 (6%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
N WNA+ ++ E R V V+F M + + F+F +VLK+C ++ ++EG ++H
Sbjct: 80 NSFIWNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSLVLKACSRLGLIKEGMQIH 139
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
L+ K +++F+ L+ LY + ++F M +++ V + SMI+GY+ G +
Sbjct: 140 GLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDSVSFNSMIDGYVKHGMVK 199
Query: 184 SARCLFELAP--ERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSG--- 237
SA LF++ P ++ +I WN+++S Y ++ A +LF++MPKKD+ISWN+M++G
Sbjct: 200 SAWELFDVMPMEQKILISWNSMISEYARSEERLKVAWELFEEMPKKDLISWNSMINGCVK 259
Query: 238 ----------------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+A G+++ + LF EMPE +V S N ++ Y
Sbjct: 260 CGKMENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARY 319
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
NG E L F ML++ +F ++AT++ LSA A+LG D +H Y E NG+ +
Sbjct: 320 VQNGYLMESLKNFHDMLSK-ELFLDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLS 378
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+G ALID YAKCG I+NA+ VF +D K + WN I+SGLA+HG G A LF EM+
Sbjct: 379 EKLGVALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFMEMEK 438
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
P+ ITFIG+L AC H GLV+EGL F+ M + P+++HY CMVD+L +AG +
Sbjct: 439 LFVKPNDITFIGVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAGHVE 498
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
E FV++M IE + V+W LL +CR ++N + E + L ++ N +++V+LSNIY
Sbjct: 499 ETKKFVEKMSIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNLSSYVLLSNIYA 558
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
G W DV RI++ M+ KK+PGCS IE+
Sbjct: 559 GFGIWNDVHRIRMMMKQRDLKKIPGCSQIEL 589
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A+L ++ AR +F ++ + +V+S NAM Y QN + + F M + +
Sbjct: 284 MVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARYVQNGYLMESLKNFHDMLSKELFLD 343
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T I L + ++ EG LHC + NGF + +G ALI+ Y+ +I+ A VF
Sbjct: 344 NATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDTYAKCGSIDNALSVFE 403
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN------- 212
++D +++ W ++++G G FEL E + + +I V N
Sbjct: 404 DIDNKSIDHWNAILSGLAIHG---LGEVAFELFMEMEKLFVKPNDITFIGVLNACNHAGL 460
Query: 213 MIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLI 266
+ E F+ M + D + + M+ G VEE K+ E+M E N W L+
Sbjct: 461 VKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAGHVEETKKFVEKMSIEPNDVVWRTLL 520
Query: 267 GGYANNGLF 275
N+ F
Sbjct: 521 SACRNHENF 529
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + +G S+ + +I A+ + A +F+ I ++++ WNA+ +G A +
Sbjct: 366 LHCYIEDNGFSLSEKLGVALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGL 425
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK---NGFRANIFV 137
LF +M+KL PN TF VL +C ++EG L C L + +
Sbjct: 426 GEVAFELFMEMEKLFVKPNDITFIGVLNACNHAGLVKEG--LMCFELMKRVDKVEPKLQH 483
Query: 138 GTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
++++ +E K +M E N VVW ++++
Sbjct: 484 YVCMVDILGQAGHVEETKKFVEKMSIEPNDVVWRTLLSA 522
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 207/585 (35%), Positives = 318/585 (54%), Gaps = 58/585 (9%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYAR---KMFDKITDQNVVSWN 69
+T + HQI ++ +G + +++ + T A +F +IT+ ++ WN
Sbjct: 25 KTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDIFLWN 84
Query: 70 AMFNGYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC--VKINALREGEELHCLV 126
A+ Y+Q + + LF M +P+ FTFP +LK+C V I+A + G ++HC V
Sbjct: 85 AIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHV 144
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
L+NGF +++FV AL+ Y + AYKVF E R+ V + +MING+ GD+
Sbjct: 145 LRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCF 204
Query: 187 CLFE------LAPER-----------------------------------DVILWNTIVS 205
+F + P+ +V+L N +V
Sbjct: 205 RVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVD 264
Query: 206 GYIDVRNMIEARKLFDQM-PKKDVIS-WNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
Y ++ A + + P K V++ W +++S YA G+V+ +RLF++M ER+V SW
Sbjct: 265 MYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWT 324
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I GY++ G F E L+ F ++ G + P++ +V LSACARLGAL+ + +H +Y
Sbjct: 325 AMISGYSHAGCFQEALELFVKLEGLG-MKPDEVAVVAALSACARLGALELGRRIH--RQY 381
Query: 324 NGYQGNVCVG----NALIDMYAKCGIIENAVDVF--NSMDTKDLITWNTIISGLAMHGRG 377
G + +A++DMYAKCG I+ A+DVF S D K +N+IISGLA HGRG
Sbjct: 382 AGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRG 441
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A +LF EM G PD ITF+ +L AC H GLV+ G F+SM Y + P++EHYGC
Sbjct: 442 EYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGC 501
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
MVDLL RAG L EA + +MP +A+AVIW LL +C+V+ +V LA +A L EL+ +
Sbjct: 502 MVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQHDH 561
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
A +VMLSN+ D + + A ++ A+ + G +K PG S +E+N
Sbjct: 562 GAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNR 606
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 294/530 (55%), Gaps = 40/530 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
++T A+ ++ AR++FD++ D++VVSWNAM +GY N LF D MP
Sbjct: 61 LLTGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLF------DVMPA 114
Query: 99 -NCFTFPIVLKSCVKINALREGEELH----------CLVLKNGFRANIFVG--------- 138
N ++ +++ +K +RE E+ C L +G+ + ++
Sbjct: 115 RNDVSWLMMISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRM 174
Query: 139 --------TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
A+I Y+ ++ A ++F EM E++ V WT+++ GY+ GD+ +A +F+
Sbjct: 175 QTPDLVSWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQ 234
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P+RDV+ WNT++SG++ + +A +LF MP +D++SWNT+L GY GD++
Sbjct: 235 DMPDRDVLAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAW 294
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F +MPE++ SWN LI GY + G L+ M T+G P+ AT +S C+ L A
Sbjct: 295 FRKMPEKDEASWNTLISGYKDEG----ALNLLSEM-TQGGYRPDQATWSVAISICSSLAA 349
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L + VHV G++ + V ++LI MY+KCG+I A VF+ + +D +TWN +I+
Sbjct: 350 LGCGRMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIAT 409
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HG A AL+LF M G PD TF+ +L AC H G + EG +F+SM D++++P
Sbjct: 410 YAYHGLAAEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIP 469
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ +HY CMVDLL R+G + +A +F +R+P + W L SC + +++L EL + +
Sbjct: 470 RSDHYSCMVDLLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNV 529
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ P + + +LSNIY G W A ++ M++ G KK GCS IE+
Sbjct: 530 LQSRPSDGGMYTLLSNIYAAKGMWSSAASVRGLMKEQGLKKETGCSWIEL 579
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 53/362 (14%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ AA +VF EM ERNV W MI+G + G + AR +F+ P R+ + W +++GY
Sbjct: 9 VGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYARC 68
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ EAR+LFD+MP + V+SWN M+SGY NG V+ + LF+ MP RN SW +I GY
Sbjct: 69 GRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYM 128
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
E + F R P+ T +V
Sbjct: 129 KRKRVREAREIFDRA-------PSPTT-------------------------------SV 150
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
C NAL+ YA+ G +++A D+F M T DL++WN +I+G G A LF EM
Sbjct: 151 C--NALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMITGYTRAGMMQVAQRLFDEMPE- 207
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
D +++ I+ G V+ FQ M D ++ + M+ + RL +
Sbjct: 208 ---KDTVSWTAIVRGYLQNGDVDAAWKVFQDMP-DRDVLA----WNTMMSGFVVSERLDD 259
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A+ MP + D V W +L +++ A ++ E K+ A++ L + Y D
Sbjct: 260 ALRLFADMP-DRDLVSWNTILQGYVQQGDMDGATAWFRKMPE---KDEASWNTLISGYKD 315
Query: 511 LG 512
G
Sbjct: 316 EG 317
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 13/289 (4%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
N+F +I + A VF M RN V W +++ GY CG + AR LF+ P
Sbjct: 23 NVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYARCGRVAEARELFDRMP 82
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+R V+ WN ++SGY+ + AR LFD MP ++ +SW M+SGY V E + +F+
Sbjct: 83 DRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYMKRKRVREAREIFDR 142
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
P N L+ GYA +G + D F RM T P+ + +++ R G +
Sbjct: 143 APSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQT-----PDLVSWNAMITGYTRAGMMQV 197
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
++ ++ E + + A++ Y + G ++ A VF M +D++ WNT++SG +
Sbjct: 198 AQ--RLFDEMP--EKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVLAWNTMMSGFVV 253
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
R AL LF +M + D +++ IL G ++ ++F+ M
Sbjct: 254 SERLDDALRLFADMPDR----DLVSWNTILQGYVQQGDMDGATAWFRKM 298
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+ +G E+ + +I+ ++ +T A ++FD I ++ V+WNAM YA +
Sbjct: 360 TIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEA 419
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ LF +M K P+ TF VL +C L EG
Sbjct: 420 LTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEG 454
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 293/514 (57%), Gaps = 18/514 (3%)
Query: 33 SDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMK 92
S YI R+I AR +F+ + ++NVVSW AM GY Q +LF +M
Sbjct: 87 SGYIKNRMIEE---------ARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP 137
Query: 93 KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
+ N ++ ++ + + + +L+ ++ ++ T +I ++
Sbjct: 138 ER----NEVSWTVMFGGLIDGGRIDDARKLYDMMPGK----DVVASTNMIGGLCREGRVD 189
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A ++F EM ERNV+ WT+MI GY + AR LFE+ PE+ + W +++ GY
Sbjct: 190 EAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ +A + F+ MP K VI+ N M+ G++ + +R+F++M +R+ +W G+I Y
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERK 309
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G E L+ F +M +G V P+ +++++LS CA L +L + + VH + + G+V V
Sbjct: 310 GFELEALELFAQMQRQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYV 368
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+ L+ MY KCG + A VF+ +KD+I WN+IISG A HG G AL +FHEM +G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGT 428
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
MP+ +T I IL AC++ G +EEGL F+SM + + P +EHY C VD+L RAG++ +A+
Sbjct: 429 MPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ + M I+ DA +W LLG+C+ + ++LAE+A ++L E+EP+N +++LS+I
Sbjct: 489 ELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRS 548
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+W DVA ++ MR K PGCS IEV + V +
Sbjct: 549 KWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHM 582
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 195/455 (42%), Gaps = 57/455 (12%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I+ +++ Q+ ARK FD + + + SWN++ +GY N R +F D MP
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMF------DEMPE- 76
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
NI L+ Y + IE A VF
Sbjct: 77 --------------------------------RNIVSWNGLVSGYIKNRMIEEARNVFEI 104
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M ERNVV WT+M+ GY+ G +V A LF PER+ + W + G ID + +ARKL+
Sbjct: 105 MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLY 164
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D MP KDV++ M+ G G V+E + +F+EM ERNV +W +I GY N + +D
Sbjct: 165 DMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQN----KRVD 220
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALID 338
+++ V P T +S + L S + E+ V NA+I
Sbjct: 221 VARKLF---EVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
+ G I A VF+ M+ +D TW +I G AL LF +M+ G P +
Sbjct: 274 ALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPS 333
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
I IL C + ++ G + + + ++ + + G L +A R
Sbjct: 334 LISILSVCATLASLQYGRQVHAHL-VRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
P D ++W +++ Y + L E AL+ E+
Sbjct: 393 P-SKDIIMWNSIISG---YASHGLGEEALKVFHEM 423
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 155/332 (46%), Gaps = 29/332 (8%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G I AR F+ + + WN+IVSGY EAR++FD+MP+++++SWN ++SGY
Sbjct: 31 GQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYI 90
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
N +EE + +FE MPERNV SW ++ GY G+ E F RM N+ +
Sbjct: 91 KNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER-----NEVSWT 145
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQG-NVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+ G +D ++ + Y+ G +V +I + G ++ A ++F+ M
Sbjct: 146 VMFGGLIDGGRIDDARKL-----YDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRE 200
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+++ITW T+I+G + R A LF M E +++ +L T G +E+ +
Sbjct: 201 RNVITWTTMITGYGQNKRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSGRIEDAEEF 256
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+ M M I M+ L G + +A +M + D W ++ + Y+
Sbjct: 257 FEVMPMKPVIA-----CNAMIVALGEVGEIVKARRVFDQME-DRDNATWRGMI---KAYE 307
Query: 479 NVELAELALERLTELE-----PKNPANFVMLS 505
ALE +++ P P+ +LS
Sbjct: 308 RKGFELEALELFAQMQRQGVRPSFPSLISILS 339
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 91/197 (46%), Gaps = 22/197 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + ++ Q+ +V + Y+ ++T + ++ A+ +FD+ ++++ WN++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSI 403
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GYA + + +F +M MPN T +L +C L EG E+ F
Sbjct: 404 ISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEI--------F 455
Query: 132 RA--NIFVGTALIELYST-----GKA--IEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
+ + F T +E YS G+A ++ A ++ M + + VW +++ +
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSR 515
Query: 182 I----VSARCLFELAPE 194
+ V+A+ LFE+ PE
Sbjct: 516 LDLAEVAAKKLFEIEPE 532
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 261/477 (54%), Gaps = 64/477 (13%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L C +N +++ +H VLK FVG LI +S + + A VF ++ + +V
Sbjct: 24 LHRCSSLNQVKQ---IHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 167 VVWTSMINGYIS-------------------CGDIVSARCLFELAPER------------ 195
+++ ++I ++ C D + L + +
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 196 --------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
D+ + N+++ Y + + EAR+LFD+MP++D +SWNT+L GY G++
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAA 200
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LFE+MP RNV SW+ + GL F+ D T++++LSACA
Sbjct: 201 FELFEKMPARNVVSWSTM-----EAGLKFD-----------------DGTVISILSACAV 238
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
G L K VH E ++ + V NALIDMYAKCG +ENA+ +F+ M KD+++WN I
Sbjct: 239 SGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAI 298
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I GLAMHG G AL LF MK G +PD +TF+G+LCACTH G V+EGL YF +M DY
Sbjct: 299 IQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYG 358
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P++EHYGCMVDLL R GRL EA V MP+E +A+IW LLG+CR++ LAE
Sbjct: 359 VPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVF 418
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+RL + E + N MLSNIY G W + A I++ M+ T +K G SSIEV++ V
Sbjct: 419 DRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEV 475
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 186/389 (47%), Gaps = 23/389 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI QV+ + L + ++ ++I A + +QMT A +F++I D +V+ +N + + +N
Sbjct: 35 QIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNS 94
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F +M+ + FT+P +LK+C +R E +H V K GF +IFV
Sbjct: 95 EPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPN 154
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI+ Y + A ++F EM ER+ V W ++++GY+ G++ +A LFE P R+V+
Sbjct: 155 SLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVS 214
Query: 200 WNTI-------------------VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
W+T+ VSG + + + A + +S N ++ YA
Sbjct: 215 WSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVS-NALIDMYAK 273
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G +E +F M ++V SWN +I G A +G + L F RM EG V P+ T V
Sbjct: 274 CGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFV-PDKVTFVG 332
Query: 301 VLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
VL AC G +D + H G V ++D+ + G ++ A + +SM +
Sbjct: 333 VLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLE 392
Query: 360 -DLITWNTIISGLAMHGRGAGALSLFHEM 387
+ I W T++ MH A +F +
Sbjct: 393 PNAIIWGTLLGACRMHSATGLAEEVFDRL 421
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 20/179 (11%)
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+S R +L+ K +H VG LI ++ C + AV+VFN + D+
Sbjct: 21 ISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ +NT+I + A S+F EM+++G D T+ +L AC+ G + +
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACS-------GKVWVRV 133
Query: 422 MAMDYSIVPQIEHYGCMVDLLA---------RAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ M I Q+E G +D+ + G L EA MP E D V W +L
Sbjct: 134 VEM---IHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMP-ERDTVSWNTIL 188
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 303/533 (56%), Gaps = 11/533 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + V SG + ++ ++ +M AR++FD + ++ +VSWN M NGY +N
Sbjct: 145 IHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ +++F M P+C T VL C + L G +H LV +I V +
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERD 196
L+++Y+ ++ A +F EMD+R+VV WT+M+NGYI GD SA L ++ + + +
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324
Query: 197 VILWNTIVSGYIDVRNMIEARKL----FDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ +++S + ++ R L Q + +VI ++ YA +V R+F
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFS 384
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ ++ WN +I G +NGL + ++ FK+ML E V PNDAT+ ++L A A L L
Sbjct: 385 KTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEA-VDPNDATLNSLLPAYAFLTDLQ 443
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWNTIISG 370
++ +H Y +G+ + V LID+Y+KCG +E+A ++FN + KD +ITW+ II+G
Sbjct: 444 QARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAG 503
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
MHG G A+SLF +M +G P+ ITF IL AC+H GLV+EGL F+ M D +
Sbjct: 504 YGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSL 563
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ +HY C++DLL RAGRL EA + ++ M + +W LLGSC +++NVEL E+A + L
Sbjct: 564 RTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWL 623
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
ELEP N N+V+L+NIY +GRW+D +++ M + G +K P S IEV +
Sbjct: 624 FELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 229/482 (47%), Gaps = 25/482 (5%)
Query: 20 QIQTQVVTSGLEKSDY---ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
QI +T GL S Y + + A A +ARK+FD++ + ++ SWNAM Y
Sbjct: 39 QIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYT 98
Query: 77 QNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + LF QM P+ +T+P V+K+C G +H + +GF ++
Sbjct: 99 NSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDA 158
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----- 190
FV +L+ +Y +E A +VF M ER +V W +MINGY G + A +F+
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218
Query: 191 -LAPERDVILWNTIVSGYID-------VRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+ P+ ++ V Y+ V ++E + L +D+ WN++L YA G
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNL-----GEDISVWNSLLDMYAKCG 273
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+++E + +F EM +R+V SW ++ GY NG L + M E V PN T+ +VL
Sbjct: 274 NMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES-VKPNFVTLASVL 332
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SACA L +L + +H +A + V V ALIDMYAKC + + VF+ +
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTA 392
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
WN IISG +G A+ LF +M P+ T +L A + +++ +
Sbjct: 393 PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARN-MHGY 451
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP-IEADAVIWANLLGSCRVYKNVE 481
+ + +IE ++D+ ++ G L A + +P + D + W+ ++ ++ + E
Sbjct: 452 LIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGE 511
Query: 482 LA 483
A
Sbjct: 512 TA 513
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 142/281 (50%), Gaps = 14/281 (4%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
+++ + YA G ++LF+E+ ++FSWN +I Y N+GL ++ L F +ML GR
Sbjct: 60 SSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
+P++ T V+ AC + +H +G+ + V N+L+ MY CG +E A
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ M + L++WNT+I+G +G AL +F M G PD T + +L C+++
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 412 VEEG-----LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+E G L +++ D S+ + ++D+ A+ G + EA M + D V
Sbjct: 240 LEVGRRVHALVEVKNLGEDISV------WNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVS 292
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
W ++ + + A L L ++ + E P NFV L+++
Sbjct: 293 WTTMMNGYILNGDARSA-LLLCQMMQFESVKP-NFVTLASV 331
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L + KH + + LE + +I A+ + + ++F K + Q WNA
Sbjct: 337 SLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNA 396
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ +G N R + LF QM PN T +L + + L++ +H ++++G
Sbjct: 397 IISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSG 456
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEM--DERNVVVWTSMINGYISCGDIVSARCL 188
F + I V T LI++YS ++E+A+ +F + +++++ W+++I GY G +A L
Sbjct: 457 FLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISL 516
Query: 189 FELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT-----MLSGYA 239
F+ + V I + +I+ + E LF M + + +S T ++
Sbjct: 517 FDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLG 576
Query: 240 NNGDVEECKRLFEEMPER-NVFSWNGLIG 267
G +EE L M R N W L+G
Sbjct: 577 RAGRLEEAYELIRTMAFRPNHAVWGALLG 605
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 303/533 (56%), Gaps = 11/533 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + V SG + ++ ++ +M AR++FD + ++ +VSWN M NGY +N
Sbjct: 145 IHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ +++F M P+C T VL C + L G +H LV +I V +
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERD 196
L+++Y+ ++ A +F EMD+R+VV WT+M+NGYI GD SA L ++ + + +
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324
Query: 197 VILWNTIVSGYIDVRNMIEARKL----FDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ +++S + ++ R L Q + +VI ++ YA +V R+F
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFS 384
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ ++ WN +I G +NGL + ++ FK+ML E V PNDAT+ ++L A A L L
Sbjct: 385 KXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEA-VDPNDATLNSLLPAYAFLTDLQ 443
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWNTIISG 370
++ +H Y +G+ + V LID+Y+KCG +E+A ++FN + KD +ITW+ II+G
Sbjct: 444 QARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAG 503
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
MHG G A+SLF +M +G P+ ITF IL AC+H GLV+EGL F+ M D +
Sbjct: 504 YGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSL 563
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ +HY C++DLL RAGRL EA + ++ M + +W LLGSC +++NVEL E+A + L
Sbjct: 564 RTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWL 623
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
ELEP N N+V+L+NIY +GRW+D +++ M + G +K P S IEV +
Sbjct: 624 FELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRNI 676
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 229/482 (47%), Gaps = 25/482 (5%)
Query: 20 QIQTQVVTSGLEKSDY---ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
QI +T GL S Y + + A A +ARK+FD++ + ++ SWNAM Y
Sbjct: 39 QIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYT 98
Query: 77 QNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + LF QM P+ +T+P V+K+C G +H + +GF ++
Sbjct: 99 NSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDA 158
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----- 190
FV +L+ +Y +E A +VF M ER +V W +MINGY G + A +F+
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218
Query: 191 -LAPERDVILWNTIVSGYID-------VRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+ P+ ++ V Y+ V ++E + L +D+ WN++L YA G
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNL-----GEDISVWNSLLDMYAKCG 273
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+++E + +F EM +R+V SW ++ GY NG L + M E V PN T+ +VL
Sbjct: 274 NMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES-VKPNFVTLASVL 332
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SACA L +L + +H +A + V V ALIDMYAKC + + VF+ +
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTA 392
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
WN IISG +G A+ LF +M P+ T +L A + +++ +
Sbjct: 393 PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARN-MHGY 451
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP-IEADAVIWANLLGSCRVYKNVE 481
+ + +IE ++D+ ++ G L A + +P + D + W+ ++ ++ + E
Sbjct: 452 LIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGE 511
Query: 482 LA 483
A
Sbjct: 512 TA 513
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 142/281 (50%), Gaps = 14/281 (4%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
+++ + YA G ++LF+E+ ++FSWN +I Y N+GL ++ L F +ML GR
Sbjct: 60 SSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
+P++ T V+ AC + +H +G+ + V N+L+ MY CG +E A
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ M + L++WNT+I+G +G AL +F M G PD T + +L C+++
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 412 VEEG-----LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+E G L +++ D S+ + ++D+ A+ G + EA M + D V
Sbjct: 240 LEVGRRVHALVEVKNLGEDISV------WNSLLDMYAKCGNMDEAQMIFYEMD-KRDVVS 292
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
W ++ + + A L L ++ + E P NFV L+++
Sbjct: 293 WTTMMNGYILNGDARSA-LLLCQMMQFESVKP-NFVTLASV 331
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L + KH + + LE + +I A+ + + ++F K + Q WNA
Sbjct: 337 SLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNA 396
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ +G N R + LF QM PN T +L + + L++ +H ++++G
Sbjct: 397 IISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSG 456
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEM--DERNVVVWTSMINGYISCGDIVSARCL 188
F + I V T LI++YS ++E+A+ +F + +++++ W+++I GY G +A L
Sbjct: 457 FLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISL 516
Query: 189 FELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT-----MLSGYA 239
F+ + V I + +I+ + E LF M + + +S T ++
Sbjct: 517 FDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLG 576
Query: 240 NNGDVEECKRLFEEMPER-NVFSWNGLIG 267
G +EE L M R N W L+G
Sbjct: 577 RAGRLEEAYELIRTMAFRPNHAVWGALLG 605
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 289/539 (53%), Gaps = 68/539 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
++L +I Q+V SG + +YI +++ + A+K+F+ IT + WN + G+
Sbjct: 41 RNLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGH 100
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+++ + + LF +M N FT+ +L +CV+ REGE++H VL NG+ +N+
Sbjct: 101 TRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNL 160
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+V T LI L Y + GD
Sbjct: 161 YVRTNLINL-------------------------------YANGGD-------------- 175
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
G D++ AR LFD+MP +V+ WN++L+GY GD + +++F+EMP
Sbjct: 176 ---------GGDFDLK---RARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMP 223
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERNV +W ++ G+A NG L F +M G V + +V LSACA LG L K
Sbjct: 224 ERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAG-VELDQVALVAALSACAELGDLTLGK 282
Query: 316 WVHVYAEYNGYQGN----VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
W+H Y E + V + NALI MYA CG+++ A VF + ++ ++W++II+G
Sbjct: 283 WIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGF 342
Query: 372 AMHGRGAGALSLFHEMKNAGE---MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
A G G A+ +F M +G+ PD ITFIG L AC+H GL+ +G+ FQSM + +
Sbjct: 343 AKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGV 402
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
+PQIEHYGCMVDLL+RAG L EA+ ++ MP++ + +W LL CR++KN E+ +
Sbjct: 403 IPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAK 462
Query: 489 RLT-ELEPKNPAN--FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ E+ P N A F++L+N+Y GRW+D A ++ M D G KK G S IE+N V+
Sbjct: 463 HLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVL 521
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 172/416 (41%), Gaps = 61/416 (14%)
Query: 202 TIVSGYIDVRNM--IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+++ + RN+ I A+ + +K+ I N +LS Y + G + +++FE++ +
Sbjct: 32 SVLKSCVSFRNLAKIHAQIVVSGFSQKNYI-LNHLLSLYISFGSLGSAQKVFEDITAPST 90
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
WN +I G+ + + ++ FKRM G V N T +LSAC R + +H
Sbjct: 91 TVWNQIIKGHTRSKTSKKSIELFKRMTLAG-VEANGFTYSFLLSACVRSRLFREGEQIHG 149
Query: 320 YAEYNGYQGNVCVGNALIDMYA------------------------------------KC 343
NGY N+ V LI++YA +
Sbjct: 150 RVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRR 209
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G + A VF+ M +++ TW +++G A +G+ ALSLF +M+ AG D + + L
Sbjct: 210 GDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAAL 269
Query: 404 CACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
AC +G + G Y + + + ++ + A G + A + +P
Sbjct: 270 SACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIP- 328
Query: 461 EADAVIWANLLG-----SCRVYKNVELAELAL-ERLTELEPKNPANFVMLSNIYGDLGRW 514
+ + V W++++ C V + + + +L L E+ P + F+ G
Sbjct: 329 QRNTVSWSSIITGFAKQGCGV-EAIRIFQLMLCSGQNEVRP-DEITFIGALTACSHAGLI 386
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLP 570
D R+ +M T F +P ++ GC+ L R ++ ++I+ +P
Sbjct: 387 SDGIRLFQSMHKT-FGVIP--------QIEHYGCMVDLLSRAGLLTEALSLIESMP 433
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
I +VL +C L +H +G+ + N L+ +Y G + +A VF +
Sbjct: 30 IFSVLKSCVSFRNL---AKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDIT 86
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
WN II G ++ LF M AG +G T+ +L AC L EG
Sbjct: 87 APSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG 144
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 299/503 (59%), Gaps = 17/503 (3%)
Query: 56 MFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
+F++ D+ +V SWN++ A++ ++ F+ M+KL P +FP +K+C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ G++ H G++++IFV +ALI +YST +E A KVF E+ +RN+V WTSMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 175 GYISCGDIVSARCLFE--LAPERD----VILWNTIVSGYIDVRNMIEARKLFDQMPK--- 225
GY G+ + A LF+ L E D + L + + I + + A+ L + +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 226 -----KDVISWNTMLSGYANNGD--VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ V NT+L YA G+ V +++F+++ +++ S+N ++ YA +G+ E
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+ F+R++ V N T+ TVL A + GAL K +H G + +V VG ++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG +E A F+ M K++ +W +I+G MHG A AL LF M ++G P+ IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC+H GL EG +F +M + + P +EHYGCMVDLL RAG L +A D ++RM
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
++ D++IW++LL +CR++KNVELAE+++ RL EL+ N +++LS+IY D GRWKDV
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
R+++ M++ G K PG S +E+N
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELN 533
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 176/379 (46%), Gaps = 30/379 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q G + +++ +I + ++ ARK+FD+I +N+VSW +M GY N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 80 FHRTVVVLFTQM-----KKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
V LF + DAM + V+ +C ++ A E +H V+K GF
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 134 NIFVGTALIELYSTG--KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ VG L++ Y+ G + A K+F ++ +++ V + S+++ Y G A +F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 192 APERDVILWNTIV----------SGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSG 237
+ V+ +N I SG + + I DQ+ + DVI +++
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH-----DQVIRMGLEDDVIVGTSIIDM 331
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G VE ++ F+ M +NV SW +I GY +G + L+ F M+ G V PN T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYIT 390
Query: 298 IVTVLSACARLG-ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
V+VL+AC+ G ++ +W + G + + ++D+ + G ++ A D+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 357 DTK-DLITWNTIISGLAMH 374
K D I W+++++ +H
Sbjct: 451 KMKPDSIIWSSLLAACRIH 469
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
+HS L K +H QV+ GLE + II + ++ ARK FD++ ++NV
Sbjct: 298 SHSGALRIGKCIHD---QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW AM GY + + LF M PN TF VL +C EG + +
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM 414
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGYISC 179
+ G + +++L ++ AY + M + + ++W+S+ I+ +
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVEL 474
Query: 180 GDIVSARCLFEL 191
+I AR LFEL
Sbjct: 475 AEISVAR-LFEL 485
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 188/514 (36%), Positives = 280/514 (54%), Gaps = 46/514 (8%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQ--MKKLDAMPNCFTFPIVLKSCVKINALREG--EELH 123
W + YA R +++ + ++ P PI+LK+ + G + LH
Sbjct: 23 WAHLVREYASQSLLREAALVYARNVPRRTHHQP---LLPILLKAAATASPAEPGLGKSLH 79
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV----------------- 166
LK+ F ++ VGT ++ +Y A+ A + F EM +RNV
Sbjct: 80 AEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAAAGDMD 139
Query: 167 --------------VVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDV 210
V W ++I G+ GD+ AR FE P R V+ W +V GY+
Sbjct: 140 GALALFGGMRSWTYVTWATLIRGFAKKGDMAEARRWFETTPPGMRTVVTWTVLVHGYVSA 199
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M AR++FD+MP ++ W++M++GY G+ EE + +F +P RN+ +WN LI GYA
Sbjct: 200 GDMEAAREVFDRMPARNAFVWSSMVTGYFKAGNAEEAQAVFHRIPTRNLVNWNALIAGYA 259
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G + L+AF ML E RV P++ T+ ++LSACA+LG+L+ K VH + + N
Sbjct: 260 QIGCSEKALEAFDSMLQE-RVKPDEFTMASLLSACAQLGSLEQGKKVHDFINREHIRKNH 318
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N LIDMYAKCG + A +F+ M K+ WNT+IS LA HGR AL LF +M+++
Sbjct: 319 FVLNGLIDMYAKCGDLVYARYIFDGMRWKNTECWNTMISALASHGRSDEALHLFFQMEHS 378
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G+ P+ IT + +L ACTH G V+EGL F + Y + +EHYGC+VDLL RAG+L E
Sbjct: 379 GQTPNTITVLAVLGACTHGGFVDEGLRIFNKLDA-YGVEAGVEHYGCLVDLLGRAGKLKE 437
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE----PKNPANFVMLSN 506
A + VK MP E + VIW +LLG+CRV+ + E++ L + + L N A ++MLSN
Sbjct: 438 AYEIVKNMPEEPNEVIWGSLLGACRVHGDAEMSRLVTDEIHRLHSVHASSNDAEYIMLSN 497
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
I RW+ +I+ M G +K P CSS+E+
Sbjct: 498 IMAASKRWEQAEQIRRKMARHGVEKTPACSSLEL 531
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 170/395 (43%), Gaps = 47/395 (11%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + + S + + I++ + + AR+ FD++ D+NV+S+NA+ GYA
Sbjct: 78 LHAEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAAAGD 137
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF M+ T+ +++ K + E G R + T
Sbjct: 138 MDGALALFGGMRSW----TYVTWATLIRGFAKKGDMAEARRWF-ETTPPGMR-TVVTWTV 191
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L+ Y + +EAA +VF M RN VW+SM+ GY G+ A+ +F P R+++ W
Sbjct: 192 LVHGYVSAGDMEAAREVFDRMPARNAFVWSSMVTGYFKAGNAEEAQAVFHRIPTRNLVNW 251
Query: 201 NTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDVEECKR------- 249
N +++GY + +A + FD M K D + ++LS A G +E+ K+
Sbjct: 252 NALIAGYAQIGCSEKALEAFDSMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINR 311
Query: 250 ----------------------------LFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+F+ M +N WN +I A++G E L
Sbjct: 312 EHIRKNHFVLNGLIDMYAKCGDLVYARYIFDGMRWKNTECWNTMISALASHGRSDEALHL 371
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F +M G+ PN T++ VL AC G +D + + G + V L+D+
Sbjct: 372 FFQMEHSGQT-PNTITVLAVLGACTHGGFVDEGLRIFNKLDAYGVEAGVEHYGCLVDLLG 430
Query: 342 KCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHG 375
+ G ++ A ++ +M + + + W +++ +HG
Sbjct: 431 RAGKLKEAYEIVKNMPEEPNEVIWGSLLGACRVHG 465
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 4/212 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K +H + + K+ ++ +I A+ + YAR +FD + +N WN M
Sbjct: 299 LEQGKKVHDF---INREHIRKNHFVLNGLIDMYAKCGDLVYARYIFDGMRWKNTECWNTM 355
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ A + + LF QM+ PN T VL +C + EG + + G
Sbjct: 356 ISALASHGRSDEALHLFFQMEHSGQTPNTITVLAVLGACTHGGFVDEGLRIFNKLDAYGV 415
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLFE 190
A + L++L ++ AY++ M +E N V+W S++ GD +R + +
Sbjct: 416 EAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPEEPNEVIWGSLLGACRVHGDAEMSRLVTD 475
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+ ++ + YI + N++ A K ++Q
Sbjct: 476 EIHRLHSVHASSNDAEYIMLSNIMAASKRWEQ 507
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/534 (36%), Positives = 302/534 (56%), Gaps = 13/534 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFD--KITDQNVVSWNAMFNGYAQN 78
I VV +G E + ++ ++ A+ K ++ A +F + +N V W AM GYAQN
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
V F M N +TFP +L +C + A GE++H ++K+GF +N++V
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ 303
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+AL+++Y+ ++ A + M++ +VV W S++ G++ G A LF+ R++
Sbjct: 304 SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMK 363
Query: 199 L--------WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ N V G I+ ++ + + ++S N ++ YA GD++ +
Sbjct: 364 IDDYTFPSVLNCCVVGSINPKS-VHGLIIKTGFENYKLVS-NALVDMYAKTGDMDCAYTV 421
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FE+M E++V SW L+ GYA N E L F M G V P+ + ++LSACA L
Sbjct: 422 FEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG-VNPDQFIVASILSACAELTL 480
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+F K VH+ +G + + V N+L+ MYAKCG +++A +F SM KD+ITW II G
Sbjct: 481 LEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVG 540
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A +G+G +L + M ++G PD ITFIG+L AC+H GLV+EG YFQ M Y I P
Sbjct: 541 YAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKP 600
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
EHY CM+DL R+G+L EA + +M ++ DA +W +LL +CRV++N+ELAE A L
Sbjct: 601 GPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNL 660
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP N +VMLSN+Y +W DVA+I+ M+ G K PGCS +E+N V
Sbjct: 661 FELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRV 714
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 224/501 (44%), Gaps = 70/501 (13%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN---------- 73
T+ +S Y T +++ ++ Q+ ARK+FDK+ ++ SWN M +
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 74 ---------------------GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
GY + LF M+ + FT VL+ C
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWT 170
+ ++ GE +H V+KNGF N+FV T L+++Y+ K + A +F E D +N V+WT
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP------ 224
+M+ GY GD A F + V + + + AR +Q+
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 225 --KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+V + ++ YA GD++ K + E M + +V SWN L+ G+ +GL E L F
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354
Query: 283 KRMLTEGRVFP-NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
K M GR +D T +VL+ C +G+++ K VH G++ V NAL+DMYA
Sbjct: 355 KNM--HGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
K G ++ A VF M KD+I+W ++++G A + +L +F +M+ G PD
Sbjct: 411 KTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVAS 470
Query: 402 ILCACT-----------HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
IL AC H+ ++ GL + QS+ Y +V + A+ G L +
Sbjct: 471 ILSACAELTLLEFGKQVHLDFIKSGLRWSQSV------------YNSLVAMYAKCGCLDD 518
Query: 451 AVDFVKRMPIEADAVIWANLL 471
A M ++ D + W ++
Sbjct: 519 ADAIFVSMQVK-DVITWTAII 538
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 181/374 (48%), Gaps = 31/374 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +V SG + Y+ ++ A+ + A+ M + + D +VVSWN++ G+ ++
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV--KINALREGEELHCLVLKNGFRANIFV 137
+ LF M + + +TFP VL CV IN + +H L++K GF V
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP----KSVHGLIIKTGFENYKLV 401
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------EL 191
AL+++Y+ ++ AY VF +M E++V+ WTS++ GY + +F +
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGV 461
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW-----NTMLSGYANNGDVEE 246
P++ ++ +I+S ++ ++E K K + W N++++ YA G +++
Sbjct: 462 NPDQFIVA--SILSACAEL-TLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD 518
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+F M ++V +W +I GYA NG L + M++ G P+ T + +L AC+
Sbjct: 519 ADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSG-TRPDFITFIGLLFACS 577
Query: 307 RLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-D 360
G +D F + VY G + C +ID++ + G ++ A + + MD K D
Sbjct: 578 HAGLVDEGRKYFQQMNKVYGIKPGPEHYAC----MIDLFGRSGKLDEAKQLLDQMDVKPD 633
Query: 361 LITWNTIISGLAMH 374
W +++S +H
Sbjct: 634 ATVWKSLLSACRVH 647
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 304/556 (54%), Gaps = 48/556 (8%)
Query: 38 PRIITACAQLKQMTYAR------KMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM 91
P + T A L + +AR +F +T +++VS+NA+ G++ H V ++ +
Sbjct: 70 PNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLAL 129
Query: 92 KKLDA--MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+ D+ P+ T ++ + + G++ HC +L+ GF AN FVG+ L+++Y+
Sbjct: 130 LQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMS 189
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A + F E+D +NVV++ +MI G + C + AR LFE+ +RD I W T+V+G+
Sbjct: 190 LVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQ 249
Query: 210 VRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRL--------------- 250
EA ++F +M + D ++ ++L+ +E+ K++
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309
Query: 251 --------------------FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
F M +N+ SW LI GY NG E + F M +G
Sbjct: 310 GSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG- 368
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ P+D T+ +V+S+CA L +L+ H A +G + V NAL+ +Y KCG IE+A
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
+F+ M D ++W ++SG A GR + LF +M G PDG+TFIG+L AC+ G
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
VE+G SYF SM D+ IVP +HY CM+DL +R+G+L EA +F+K+MP+ DA+ W L
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTL 548
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
L +CR+ ++E+ + A E L E++P+NPA++V+L +++ G+W +VA+++ MRD K
Sbjct: 549 LSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVK 608
Query: 531 KLPGCSSIEVNEVVML 546
K PGCS I+ V +
Sbjct: 609 KEPGCSWIKYKNKVHI 624
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 191/399 (47%), Gaps = 46/399 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF------- 72
Q Q++ G + ++ ++ A++ + A++ FD++ +NVV +N M
Sbjct: 161 QFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCK 220
Query: 73 ------------------------NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
G+ QN + +F +M+ + +TF +L
Sbjct: 221 MVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILT 280
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+C ++AL +G+++H +++ + N+FVG+AL+++YS ++I+ A VF M +N++
Sbjct: 281 ACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS 340
Query: 169 WTSMINGYISCGDIVSA-RCLFELAPERDVI-----LWNTIVSGYIDVRNMIEARKLFDQ 222
WT++I GY G A R E+ +RD I +++S ++ ++ E +
Sbjct: 341 WTALIVGYGQNGCSEEAVRVFSEM--QRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398
Query: 223 MPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
++ + N +++ Y G +E+ RLF+EM + SW L+ GYA G E
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKET 458
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGYQGNVCVGNALI 337
+D F++ML +G V P+ T + VLSAC+R G ++ + + H + +G +I
Sbjct: 459 IDLFEKMLAKG-VKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMI 517
Query: 338 DMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
D+Y++ G ++ A + M D I W T++S + G
Sbjct: 518 DLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 139/302 (46%), Gaps = 36/302 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI ++ + + + ++ ++ ++ + + A +F ++T +N++SW A+ GY QN
Sbjct: 293 QIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNG 352
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V +F++M++ P+ +T V+ SC + +L EG + HCL L +G I V
Sbjct: 353 CSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSN 412
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+ LY +IE A+++F EM + V WT++++GY G LFE
Sbjct: 413 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFE--------- 463
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
K+ + K D +++ +LS + G VE+ + F M + +
Sbjct: 464 ------------------KMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHG 505
Query: 260 F-----SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+ +I Y+ +G E + K+M + P+ T+LSAC G ++
Sbjct: 506 IVPIDDHYTCMIDLYSRSGKLKEAEEFIKQM----PMHPDAIGWGTLLSACRLRGDMEIG 561
Query: 315 KW 316
KW
Sbjct: 562 KW 563
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 158/334 (47%), Gaps = 12/334 (3%)
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
L N +++ Y AR++FD MP ++ ++N +LS A+ + + + LF M +R+
Sbjct: 43 LLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRD 102
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+ S+N +I G++ G + + + +L + V P+ T+ T++ A + LG K
Sbjct: 103 IVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQF 162
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H G+ N VG+ L+DMYAK ++ +A F+ +D+K+++ +NT+I+GL
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A LF M + D IT+ ++ T GL E L F+ M + Q +G
Sbjct: 223 EEARRLFEVMTDR----DSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYT-FGS 277
Query: 438 MVDLLARAGRLAEAVD---FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
++ L + ++ R + + + + L+ ++++LAE R+T
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT--- 334
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
KN ++ L YG G ++ R+ M+ G
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 297/538 (55%), Gaps = 41/538 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T K LH ++ L + + +++ A A + Y R +FD+ITD+NVV +N M
Sbjct: 52 KTLKKLHS--KILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMI 109
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y N ++ +++F M P+ +T+P VLK+C L G ++H V+K G
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLD 169
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N+++G L+ +Y K ++AA +V EM
Sbjct: 170 MNLYIGNGLVSMYGKCKWLDAARRVLDEM------------------------------- 198
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNG--DVEE 246
P RD++ WN++V+GY +A KL +M K D + ++L N +V
Sbjct: 199 PGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLY 258
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
K +F ++ E+++ SWN +I Y NN + E +D + +M G V P+ +I +VL AC
Sbjct: 259 VKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHG-VEPDAVSISSVLPACG 317
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L A + +H Y E + N+ + NALIDMYAKCG ++ A VF+ M +D+++W +
Sbjct: 318 DLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTS 377
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+IS M G+G A++LF +M+++G PD I F+ +L AC+H GLV+EG F MA +Y
Sbjct: 378 MISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EY 436
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P IEHY CMVDLL RAG++ EA ++MP+E + +W +LL +CRVY ++ +A LA
Sbjct: 437 GITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLA 496
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L +L P+ +V+LSNIY GRW+DV ++ M G KK+PG S++E+N+ V
Sbjct: 497 ADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHV 554
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/569 (34%), Positives = 301/569 (52%), Gaps = 45/569 (7%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R + A +++ AR++FD+ D++VVSW A+ YA LF + DA
Sbjct: 40 RRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALF---DRPDARR 96
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-STGKA------- 150
N T+ +L + + E E L + + N+ ++E Y S+G+
Sbjct: 97 NVVTWTALLSGYARAGRVDEAEALFGRMPER----NVVSWNTMLEAYTSSGRVGDACTLF 152
Query: 151 -----------------------IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
I+ A K+F M ERNV+ WT+M+ G G + AR
Sbjct: 153 NGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARA 212
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ PER+V+ WN ++SGY + EA LF +MP +D+ SWN M++G+ N ++E
Sbjct: 213 LFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERA 272
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ LF++MP RNV +W ++ GY + L F ML +G + PN T + + AC+
Sbjct: 273 QELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDG-IRPNQVTFLGAVDACSN 331
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L L + VH +Q + + + L+++YAKCG I A VFN KD+I+WN +
Sbjct: 332 LAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGM 391
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ A HG G A+ L+ +M+ G P+ +T++G+L AC+H GLV+EGL F+ M D S
Sbjct: 392 IAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I + EHY C++DL +RAGRL +A + + +E + +W LLG C + N + +LA
Sbjct: 452 IAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAA 511
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLG 547
L E EP N + +L NIY G+WK+ A+I+ M D G KK PGCS IEV V +
Sbjct: 512 RNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHV- 570
Query: 548 CLSRELDRKSIVRAEANMIKLLPQNNHPL 576
+SR+ KS +E+++I L Q+ H +
Sbjct: 571 FVSRD---KS--HSESDLINSLLQDIHDI 594
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 118/277 (42%), Gaps = 21/277 (7%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ A G V + +RLF+ P+R+V SW L+ YA G+ + F R + R
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDR--PDAR- 95
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N T +LS AR G +D ++ + + NV N +++ Y G + +A
Sbjct: 96 -RNVVTWTALLSGYARAGRVDEAEALFGRMP----ERNVVSWNTMLEAYTSSGRVGDACT 150
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+FN M +D +WN +++ L G A LF M M + ++ G
Sbjct: 151 LFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVM----AWTTMVAGIARSGS 206
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V E + F M + ++V + M+ AR + EA D +MP D W ++
Sbjct: 207 VNEARALFDGMP-ERNVVS----WNAMISGYARNHMIDEAHDLFMKMPTR-DIASWNIMI 260
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
KN+E A+ E ++ +N + + N Y
Sbjct: 261 TGFIQNKNLERAQ---ELFDKMPRRNVVTWTTMMNGY 294
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + + + +I ++ A+ ++ ARK+F+ +++V+SWN M YA +
Sbjct: 339 QQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHH 398
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN---GFRANI 135
+ L+ +M++ PN T+ +L +C + EG + ++K+ R
Sbjct: 399 GVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEH 458
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD----IVSARCLFE 190
+ T LI+L S + A ++ + E + VW +++ G S G+ ++AR L E
Sbjct: 459 Y--TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLE 516
Query: 191 LAP 193
P
Sbjct: 517 AEP 519
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 303/548 (55%), Gaps = 17/548 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E + L QI + + S L + +I +II + + YA ++F++ + + +N
Sbjct: 14 ETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYN 73
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
AM Y+ ++ + ++ +M+ + + + +T+P V K+C A+ +G+E+H ++++
Sbjct: 74 AMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVR 133
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G+ + F+ ++L+ Y I A +VF E D ++VV W ++I GY G ++ + +
Sbjct: 134 IGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGV 193
Query: 189 F-------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG---- 237
F E+ P ++ ++ I+ +N+ R + M K V+ L
Sbjct: 194 FKEMVEVKEVRPNEGTMM--GLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALIN 251
Query: 238 -YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y G ++ ++LF+E+PE+N WN LI GY G EV++ + M + P+
Sbjct: 252 LYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLS-NLKPDRF 310
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+ VLSACA++GA + WVH +AE G +V +G ALIDMYAKCG I A VF+ M
Sbjct: 311 TVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-DVFIGTALIDMYAKCGFIGAARKVFDQM 369
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+ +++ TWN I+SG A HG+ A+ LF EM+ +G PD ITF+ +L AC H GLVE G
Sbjct: 370 NERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGK 429
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
YF M Y I P++EHYGCMVDLL RAG L EA + +K M +E + V+W LL +C +
Sbjct: 430 QYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSI 489
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ N+E+ E A + +L + ++V+L+N+Y R+ V ++ M + G K GCS
Sbjct: 490 HGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCS 549
Query: 537 SIEVNEVV 544
IE+ +VV
Sbjct: 550 MIEIGDVV 557
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 296/537 (55%), Gaps = 68/537 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
HL Q+Q+ ++ SGL S ++ +++ C +L ++YAR +FD+ + N + A+ GY
Sbjct: 39 HLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTGY 98
Query: 76 AQN-EFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+ + H + F ++ + PN F +P+VLKS +++ +H + K+GF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF- 157
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
LY VVV T++++ Y S
Sbjct: 158 ----------HLY--------------------VVVQTALLHSYAS-------------- 173
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
V ++ AR+LFD+M +++V+SW MLSGYA +GD+ LFE
Sbjct: 174 ----------------SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFE 217
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMPER+V SWN ++ NGLF E + F+RM+ + + PN+ T+V VLSACA+ G L
Sbjct: 218 EMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQ 277
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+K +H +A +V V N+L+D+Y KCG +E A VF K L WN++I+ A
Sbjct: 278 LAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSMINCFA 337
Query: 373 MHGRGAGALSLFHEMK--NAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+HGR A+++F +M N+ ++ PD ITFIG+L ACTH GLV +G YF M + I
Sbjct: 338 LHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGIE 397
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+IEHYGC++DLL RAG+ EA++ + M +EAD IW +LL +C+ Y +++LAE+A++
Sbjct: 398 PRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAEVAVKN 457
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
L L P N M++N+YG++G W++ R + ++ K PG S IE++ ++L
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSQIEIDNKLLL 514
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 72/348 (20%)
Query: 12 LETTKHLHQ-IQTQVVTSGLEKSDY------ITPRIITACAQLKQMTYARKMFDKITDQN 64
L++T +L T +V + L KS + T + + + + +T AR++FD+++++N
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA---------------------------- 96
VVSW AM +GYA++ V LF +M + D
Sbjct: 193 VVSWTAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMIN 252
Query: 97 ----MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
PN T VL +C + L+ + +H + +++FV +L++LY +E
Sbjct: 253 DPCIRPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLE 312
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A VF ++++ W SMIN + G A +FE
Sbjct: 313 EASSVFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFE---------------------- 350
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER-----NVFSWNGLIG 267
+ KL K D I++ +L+ + G V + + F+ M +R + + LI
Sbjct: 351 --DMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGIEPRIEHYGCLID 408
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
G F E L+ M E ++A ++L+AC + G LD ++
Sbjct: 409 LLGRAGQFDEALETMSTMKMEA----DEAIWGSLLNACKKYGHLDLAE 452
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 308/545 (56%), Gaps = 16/545 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + +H + V+ G + ++ ++ ++ + AR++FD++ ++VVSWNAM
Sbjct: 59 LPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAM 118
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR---EGEELHCLVLK 128
+ Y++ + L +M L P TF +L +++ G+ +HC ++K
Sbjct: 119 VSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIK 178
Query: 129 NGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G + + +L+ +Y ++ A KVF MDE++++ WT+MI GY+ G V A
Sbjct: 179 LGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYG 238
Query: 188 LFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGY 238
LF + D +++ ++SG I VR+++ A + + K KD + N +++ Y
Sbjct: 239 LFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVE-NLLITMY 297
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G++ +R+F+ + E+++ SW +I GY + G E LD F+RM+ + PN AT+
Sbjct: 298 AKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMI-RTDIRPNGATL 356
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
TV+SACA LG+L + + Y NG + + V +LI MY+KCG I A +VF +
Sbjct: 357 ATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTD 416
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNA-GEMPDGITFIGILCACTHMGLVEEGLS 417
KDL W ++I+ A+HG G A+SLFH+M A G MPD I + + AC+H GLVEEGL
Sbjct: 417 KDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLK 476
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
YF+SM D+ I P +EH C++DLL R G+L A++ ++ MP + A +W LL +CR++
Sbjct: 477 YFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIH 536
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
NVEL ELA RL + P + ++V+++N+Y LG+WK+ ++ +M G K G S
Sbjct: 537 GNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQ 596
Query: 538 IEVNE 542
+EV +
Sbjct: 597 VEVTD 601
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 209/491 (42%), Gaps = 87/491 (17%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+++ +WN M N F + +++ M N T+P++LK+C + +++ G L
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H VLK GF+A+ FV TAL+++YS + +A +VF EM +R+VV W +M++ Y +
Sbjct: 69 HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128
Query: 183 VSARCLFE----LAPERDVILWNTIVSGYIDVRN-------------------------- 212
A L + L E + +I+SGY ++ +
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSL 188
Query: 213 -------------MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
M EARK+FD M +K +ISW TM+ GY G E LF +M ++V
Sbjct: 189 ANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSV 248
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
G+ F V + ++S C ++ L + VH
Sbjct: 249 -------------GIDFVVF-------------------LNLISGCIQVRDLLLASSVHS 276
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
G V N LI MYAKCG + +A +F+ + K +++W ++I+G G
Sbjct: 277 LVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGE 336
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAMDYSIVPQIEH 434
AL LF M P+G T ++ AC +G + G + + D + + H
Sbjct: 337 ALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIH 396
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
+ ++ G + +A + +R+ + D +W +++ S ++ A ++T E
Sbjct: 397 ------MYSKCGSIVKAREVFERVT-DKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAE 449
Query: 495 PKNPANFVMLS 505
P V S
Sbjct: 450 GIMPDAIVYTS 460
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 297/537 (55%), Gaps = 30/537 (5%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q K L ++ T + ++ + +++ + A + RK+FD+++D+NVV +N
Sbjct: 29 DQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYN 88
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M Y N + +++F +M P+ +T+P VLK+C LR G +H VLK
Sbjct: 89 VMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKV 148
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G N+FVG LI +Y + A +VF EM ++VV W SM+ GY + F
Sbjct: 149 GLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGY-------AHNMRF 201
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG--DVEEC 247
+ A E R++ D K D + +++ AN +V
Sbjct: 202 DDALEI--------------------CREMEDYGQKPDGCTMASLMPAVANTSSENVLYV 241
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+++F + +N+ SWN +I Y N L + +D + +M + RV P+ T +VL AC
Sbjct: 242 EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQM-EKCRVEPDAITFASVLPACGD 300
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L AL + +H Y E N+ + N+LIDMYA+CG +++A VF+ M +D+ +W ++
Sbjct: 301 LSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSL 360
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
IS M G+G A++LF EM N+G+ PD I F+ IL AC+H GL++EG YF+ M DY
Sbjct: 361 ISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYR 420
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P+IEHY C+VDLL RAGR+ EA + +K+MPIE + +WA LL SCRV+ N+++ LA
Sbjct: 421 ITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAA 480
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L +L P+ +V+LSNIY GRWK+V I+ M+ +K PG S++E+N V
Sbjct: 481 DNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQV 537
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A+++FD++ ++V SW ++ + Y V LFT+M P+ F +L +C
Sbjct: 342 AKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSH 401
Query: 113 INALREGEELHCLVLKNGFR--ANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVW 169
L EG ++ + + +R I L++L ++ AY + +M E N VW
Sbjct: 402 SGLLDEG-RIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVW 460
Query: 170 TSMINGYISCG-------DIVSARCLFELAPERD---VILWNTIVSG-----YIDVRNMI 214
++++ SC I++A L +LAPE+ V+L N ++R+++
Sbjct: 461 ATLLS---SCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVM 517
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+ +K+ +V N + + A + + K ++EE+
Sbjct: 518 KRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEEL 557
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/534 (36%), Positives = 301/534 (56%), Gaps = 11/534 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + +G+ + ++ ++ + A K F +N+V WN M Y Q +
Sbjct: 383 QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLD 442
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F QM+ +PN FT+P +L++C + AL GE++H V+K GF+ N++V +
Sbjct: 443 NLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
LI++Y+ + A ++ + E +VV WT+MI GY+ A LFE R
Sbjct: 503 VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
D I + + +S +R + + +++ Q D+ N ++S YA G ++E F
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGA 310
E++ ++N SWN L+ G A +G F E L F RML TE V N T + +SA A L
Sbjct: 623 EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV--NMFTYGSAISAAASLAN 680
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+ + +H GY V N+LI +YAK G I +A FN M +++I+WN +I+G
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITG 740
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ HG G AL LF EMK G MP+ +TF+G+L AC+H+GLV+EGL YF+SM + +VP
Sbjct: 741 YSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVP 800
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ EHY C+VDLL RAG+L A++++K MPI ADA+IW LL +C ++KN+E+ E A L
Sbjct: 801 KSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHL 860
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP++ A +V++SNIY +W + M+D G KK PG S IEV V
Sbjct: 861 LELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAV 914
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 215/446 (48%), Gaps = 16/446 (3%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
++ Q+ ++ G + S + +I ++ + A+K+F+ I +++V+W AM +G +
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN ++LF M + P + VL + KI GE+LHCLV+K GF + +
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------ 190
V L+ LYS + + +A ++F M+ R+ V + S+I+G + G A LF
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEE 246
L P D I +++S V + + +L K D+I ++L Y+ DVE
Sbjct: 358 LKP--DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ F N+ WN ++ Y + + F++M EG + PN T ++L C
Sbjct: 416 AHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCT 474
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LGAL + +H + G+Q NV V + LIDMYAK G + A+ + + D+++W
Sbjct: 475 SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMD 425
+I+G H + AL LF EM+ G D I F + AC + + +G + QS A
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEA 451
+ I + ++ L AR GR+ EA
Sbjct: 595 FGADLSINN--ALISLYARCGRIQEA 618
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 236/491 (48%), Gaps = 25/491 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ ++ SG + + ++ + A K+FD+ ++++V SWN M + + +
Sbjct: 79 RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVG 138
+ V LF +M PN +TF VLK+CV + A +++H GF ++ V
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA 198
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI+LYS IE+A KVF + +++V W +MI+G G A LF ++
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW---------NTMLSGYANNGDVEECKR 249
++S + I+ +L +Q+ VI W N +++ Y+ + + +R
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCL-VIKWGFHSETYVCNGLVALYSRSRKLISAER 317
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M R+ S+N LI G G L+ F +M + + P+ T+ ++LSACA +G
Sbjct: 318 IFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSACASVG 376
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL +H +A G ++ + +L+D+Y+KC +E A F +T++++ WN ++
Sbjct: 377 ALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLV 436
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ + +F +M+ G +P+ T+ IL CT +G + Y + I
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL-----YLGEQIHTHVIK 491
Query: 430 P--QIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Q+ Y C ++D+ A+ G+LA A+ ++R+P E D V W ++ Y ++
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG---YVQHDMFSE 547
Query: 486 ALERLTELEPK 496
AL+ E+E +
Sbjct: 548 ALQLFEEMEYR 558
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 14/397 (3%)
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+ L M++ N + +L+ C+ +L E LHC + K+GF + +L++
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI------ 198
Y A KVF E R+V W MI+ +++ CLF +
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 199 --LWNTIVSGYI--DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+ V G I + + +R + +++ N ++ Y+ NG +E K++F +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKKVFNCI 221
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+++ +W +I G + NGL E + F M +FP + +VLSA ++ +
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ +H G+ V N L+ +Y++ + +A +F++M+++D +++N++ISGL
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G AL LF +M+ PD IT +L AC +G + +G+ S A+ + I
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIIL 399
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G ++DL ++ + A F E + V+W +L
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVML 435
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K QI + V+ +G + ++ +I+ A+ ++ A + F+ ++++NV+SWNAM GY
Sbjct: 682 KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGY 741
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-------LHCLVLK 128
+Q+ + LF +MK MPN TF VL +C I ++EG + +H LV K
Sbjct: 742 SQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK 801
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----V 183
+ +++L ++ A + EM + ++W ++++ + +I
Sbjct: 802 SEHY------VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855
Query: 184 SARCLFELAPE 194
+A L EL PE
Sbjct: 856 AAHHLLELEPE 866
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 291/529 (55%), Gaps = 43/529 (8%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL--DAMPNCFTFPIVLKSC 110
AR +FD + + + ++ H+ ++ F+ + + D P C P+V+KSC
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCV--PLVVKSC 95
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ A R+G+++HC + G +IFV TAL++ Y+ ++ A KVF EM ++ +
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKK 226
+I GY GD+V AR LF+ R WN++++ Y EA +LF +M +
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 227 DVISWNTMLSGYANNGDVE----------------------------------ECKRLFE 252
+ I+ TM S A GD+E E +R F+
Sbjct: 216 NAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFD 275
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M +R+V +W+ +I GYA NG E L+ F+RM PN+ T+V VLSACA+LG+ +
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATS-CKPNEVTLVGVLSACAQLGSDE 334
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ + E +G+ALIDMY KCG + A VFN M+ K +ITWN+++ GLA
Sbjct: 335 LGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLA 394
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
++G A++L+ EM P+ ITF+ +L ACTH GLV++G+S+F+ M + + PQ+
Sbjct: 395 LNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQV 454
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH C+VDLL ++GRL EA F+ M +E +AVIW+ LL +CR + +VELA+LA +L
Sbjct: 455 EHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLV 514
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LEP N + +V+LSNIY D G W DV I+ MR +KL S IE++
Sbjct: 515 LEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELD 563
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 22/351 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ + AR++FD + + SWN+M YA ++ + LF +M A PN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T + C K L G+ L+ + + N+ V TAL+E+Y +AI+ A + F
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAIDEARREFD 275
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M +R+VV W++MI GY G + LFE + G + + + +L
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDEL 335
Query: 220 FDQMPKKDVISWNTMLSGYANN---------GDVEECKRLFEEMPERNVFSWNGLIGGYA 270
Q+ V S N L+ Y + G V + +F M + V +WN ++ G A
Sbjct: 336 GGQI-GSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLA 394
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNG 325
NG + + +K M TE V PN+ T V +L+AC G +D F + ++
Sbjct: 395 LNGFAQDAITLYKEM-TEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQ 453
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C+ +D+ K G + A M+ + + + W+T++S H
Sbjct: 454 VEHCACI----VDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHA 500
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + V + L + Y+ +I + + AR +F+++ + V++WN+M G A N
Sbjct: 338 QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNG 397
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EELHCLVLKNGFRANI 135
F + + L+ +M + D PN TF +L +C + +G +E+ + + +
Sbjct: 398 FAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTI---HHVSPQV 454
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLFE 190
+++L + AYK +M+ E N V+W+++++ + D+ ++A L
Sbjct: 455 EHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLV 514
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
L P+ I + + + Y D + R++ D M K+V
Sbjct: 515 LEPDNSSI-YVLLSNIYADAGLWGDVREIRDLMRSKNV 551
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 268/459 (58%), Gaps = 36/459 (7%)
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI--- 177
++H +L+ G N + L Y+ ++ + VF DE NV ++++I+ ++
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124
Query: 178 -------------SCG---------------DIVSARCL----FELAPERDVILWNTIVS 205
SCG + S + L +L D+ + +V
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVD 184
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
Y +++ AR+LFD+MP++ ++S TML+ Y+ G++++ + LFE M ER+V WN +
Sbjct: 185 VYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVM 244
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
IGGYA +G+ E L F+RML + PN+ T++ VLSAC +LGAL+ +W+H Y E G
Sbjct: 245 IGGYAQSGVPNESLKLFRRMLV-AKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKG 303
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
Q NV VG ALIDMY+KCG +E+A VF+ + KD++ WN++I G AMHG AL LF
Sbjct: 304 IQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFE 363
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM G P ITFIGIL AC H GLVEEG S+F+ M Y I P+IEHYGCMV+LL RA
Sbjct: 364 EMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRA 423
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G L EA VK M I AD V+W LLG CR++ N++L E + L + + N +V+LS
Sbjct: 424 GHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLS 483
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N+Y G W+ VA+++ M++ G +K GCSSIEV+ V
Sbjct: 484 NMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKV 522
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 190/406 (46%), Gaps = 46/406 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
++ ++ HL QI ++ GL + + ++ + A L ++ + +F+ + NV S++
Sbjct: 55 DKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFS 114
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+ + + Q+ ++QM PN FTF VLKSC +L G+ LHC +K
Sbjct: 115 AIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKL 170
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++++V T L+++Y+ G + A ++F +M ER++V T+M+ Y G++ AR LF
Sbjct: 171 GLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLF 230
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS------------------- 230
E ERDV+ WN ++ GY E+ KLF +M I
Sbjct: 231 EGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALE 290
Query: 231 ---W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
W ++ Y+ G +E+ + +F+ + +++V +WN +I GYA
Sbjct: 291 SGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYA 350
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGYQGN 329
+G L F+ M G P D T + +LSAC G ++ + + + + G +
Sbjct: 351 MHGFSQHALQLFEEMTETGHK-PTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPK 409
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
+ ++++ + G +E A + +M D + W T++ +H
Sbjct: 410 IEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH 455
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/369 (46%), Positives = 233/369 (63%), Gaps = 1/369 (0%)
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML 235
Y S G + + LF V W I+ G+ +++ A++LFD MP+K ++S ML
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAML 131
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ YA +G+++ + LF+ M ER+ WN +I GY NG+ E L F+RML + + PN+
Sbjct: 132 TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML-KAKAKPNE 190
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T+++VLSAC +LGAL+ +WVH Y E NG Q NV VG AL+DMY+KCG +E+A VF+
Sbjct: 191 VTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDK 250
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+D KD++ WN++I G AMHG AL LF M G P ITFIGIL AC H G V EG
Sbjct: 251 IDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG 310
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
F M +Y I P+IEHYGCMV+LL RAG + +A + VK M IE D V+W LLG+CR
Sbjct: 311 WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACR 370
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++ + L E +E L + N +++LSNIY +G W VAR++ M+D+G KK PGC
Sbjct: 371 LHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGC 430
Query: 536 SSIEVNEVV 544
SSIEVN V
Sbjct: 431 SSIEVNNKV 439
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 17 HLHQIQTQVVTSGL------EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
H H ++ VV++ EKS ++T A+ ++ AR +FD + +++ V WN
Sbjct: 101 HGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 160
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M +GY QN +VLF +M K A PN T VL +C ++ AL G +H + NG
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 220
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIVS 184
+ N+ VGTAL+++YS ++E A VF ++D+++VV W SMI GY G +
Sbjct: 221 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 280
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGYA 239
+ C L P I + I+S + E +F++M + + + M++
Sbjct: 281 SMCRMGLHPTN--ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLG 338
Query: 240 NNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
G VE+ L + M E + W L+G
Sbjct: 339 RAGHVEQAYELVKNMNIEPDPVLWGTLLG 367
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 138/288 (47%), Gaps = 50/288 (17%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
++F TA+I ++ + +A ++F M E+++V T+M+ Y G++ +AR LF+
Sbjct: 92 SVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME 151
Query: 194 ERDVILWNTIVSGYID----------VRNMIEARKLFDQMPKKDVIS------------W 231
ERD + WN ++ GY R M++A+ +++ V+S W
Sbjct: 152 ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 211
Query: 232 -----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
++ Y+ G +E+ + +F+++ +++V +WN +I GYA +G
Sbjct: 212 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 271
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGN 329
E L FK M G + P + T + +LSAC G + F+K + EY G +
Sbjct: 272 SQEALQLFKSMCRMG-LHPTNITFIGILSACGHSGWVTEGWDIFNK---MKDEY-GIEPK 326
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGR 376
+ ++++ + G +E A ++ +M+ + D + W T++ +HG+
Sbjct: 327 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 374
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 301/530 (56%), Gaps = 13/530 (2%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
+ SG S Y II+ A+ ++ A KMF + + ++ VSWN M G+ T +
Sbjct: 26 IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
MK+ + ++F +LK + + G+++H +++K G+ N+F G+AL+++Y
Sbjct: 86 EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ + +E A++VF ++ RN V W ++I+GY GD +A L + V + + +
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205
Query: 206 GYIDVRNMIEARKLFDQMPKK--------DVISWNTMLSGYANNGDVEECKRLFE---EM 254
+ + + + KL Q+ K D N +++ Y+ G +E+ +R+F+ E
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+ + SWN ++ G++ +GL + L F+ M ++ V + A VL +C+ L L
Sbjct: 266 RDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYA-FSAVLRSCSDLATLQLG 324
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ VHV +G++ N V ++LI MY+KCG+IE+A F++ I WN++I G A H
Sbjct: 325 QQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQH 384
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
GRG AL LF MK+ D ITF+ +L AC+H+GLVEEG S+ +SM DY I P++EH
Sbjct: 385 GRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEH 444
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
Y CM+DLL RAGRL EA ++ MP E DA++W LLG+CR ++ELA L ELE
Sbjct: 445 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELE 504
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
P+ +V+LS+++G L RW + A IK M++ G KK+PG S IEV NEV
Sbjct: 505 PEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEV 554
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 18/326 (5%)
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
P+ S AL HCL +K+G A+I+ +I Y+ I A K+FGE +
Sbjct: 3 PLHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQ 62
Query: 164 RNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
R+ V W +MI G+++ G+ +A + + D + +I+ G V + +++
Sbjct: 63 RDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQV 122
Query: 220 FDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA---NN 272
M K +V + + +L YA VE+ +F+ + RN +WN LI GYA +
Sbjct: 123 HSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDR 182
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G F +LD M EG V +D T +L+ + VH +G + V
Sbjct: 183 GTAFWLLDC---MELEG-VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTV 238
Query: 333 GNALIDMYAKCGIIENAVDVFN-SMDTKDL--ITWNTIISGLAMHGRGAGALSLFHEMKN 389
NA+I Y++CG IE+A VF+ +++T+DL ++WN+I++G + G AL F M++
Sbjct: 239 CNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRS 298
Query: 390 AGEMPDGITFIGILCACTHMGLVEEG 415
+ D F +L +C+ + ++ G
Sbjct: 299 QYVVIDHYAFSAVLRSCSDLATLQLG 324
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 174/370 (47%), Gaps = 28/370 (7%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + +V G E + + ++ A+ +++ A ++F I +N V+WNA+ +GYAQ
Sbjct: 120 QQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQV 179
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
T L M+ + TF +L + + ++H ++K+G ++ V
Sbjct: 180 GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC 239
Query: 139 TALIELYSTGKAIEAAYKVF-GEMDERNV--VVWTSMINGYISCGDIVSARCLFELAPER 195
A+I YS +IE A +VF G ++ R++ V W S++ G+ G A FE +
Sbjct: 240 NAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQ 299
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM----------PKKDVISWNTMLSGYANNGDVE 245
V++ + S + + + +L Q+ P V S +++ Y+ G +E
Sbjct: 300 YVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVAS--SLIFMYSKCGVIE 357
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ ++ F+ P+ + +WN LI GYA +G LD F ++ + RV + T V VL+AC
Sbjct: 358 DARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLF-FLMKDRRVKLDHITFVAVLTAC 416
Query: 306 ARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+ +G ++ W + + + Y + C +ID+ + G ++ A + +M +
Sbjct: 417 SHIGLVE-EGWSFLKSMESDYGIPPRMEHYAC----MIDLLGRAGRLDEAKALIEAMPFE 471
Query: 360 -DLITWNTII 368
D + W T++
Sbjct: 472 PDAMVWKTLL 481
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H A +G ++ N +I YAKCG I A +F +D ++WNT+I+G G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL MK G DG +F IL +G VE G SM + +
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG-QQVHSMMVKMGYEGNVFAGSA 140
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++D+ A+ R+ +A + K + I ++V W L+
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIR-NSVTWNALI 173
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 6/189 (3%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L T + Q+ V+ SG E + ++ +I ++ + ARK FD + ++WN++
Sbjct: 318 LATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL 377
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNG 130
GYAQ+ + + LF MK + TF VL +C I + EG L + G
Sbjct: 378 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYG 437
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSA 185
+ +I+L ++ A + M E + +VW +++ +CGDI A
Sbjct: 438 IPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVA 497
Query: 186 RCLFELAPE 194
L EL PE
Sbjct: 498 SHLLELEPE 506
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/538 (35%), Positives = 302/538 (56%), Gaps = 21/538 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q+ GL + A+ ++ AR++FD++ ++ V+WNA+ GYA+N
Sbjct: 247 VHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGL 306
Query: 81 HRTVVVLFTQMKKLDA-MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V + +M++ D P+ T VL +C AL E+H ++ GF + V T
Sbjct: 307 AEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVST 366
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--LAPERDV 197
A++++Y A+++A KVF M +RN V W +MI GY GD A LF+ + DV
Sbjct: 367 AILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDV 426
Query: 198 ILWNTIVS-------GYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEE 246
+ + + G++D E R++ + + + +V N +++ Y +
Sbjct: 427 TDVSVLAALHACGELGFLD-----EGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDL 481
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
++F+E+ + SWN +I G NG + + F RM E V P+ T+V+++ A A
Sbjct: 482 AAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLEN-VKPDSFTLVSIIPALA 540
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ ++W+H Y+ +V V ALIDMYAKCG + A +FNS + +ITWN
Sbjct: 541 DISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNA 600
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I G HG G A+ LF EMK++G++P+ TF+ +L AC+H GLV+EG YF SM DY
Sbjct: 601 MIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDY 660
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ P +EHYG MVDLL RAG+L EA F+++MP+E ++ +LG+C+++KNVELAE +
Sbjct: 661 GLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEES 720
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
+R+ ELEP+ V+L+NIY + WKDVAR++ AM G +K PG S +++ NE+
Sbjct: 721 AQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEI 778
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 152/351 (43%), Gaps = 19/351 (5%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVL 127
+A A R + F M P TF +LK C L G +H +
Sbjct: 193 HARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLA 252
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-- 185
G TAL +Y+ + A +VF M R+ V W +++ GY G +A
Sbjct: 253 ARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVG 312
Query: 186 ---RCLFELAPERDVILWNTIVSGYIDVRNMIEARKL--------FDQMPKKDVISWNTM 234
R E D + +++ D + + R++ FD+ V +
Sbjct: 313 MVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDE----QVNVSTAI 368
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
L Y G V+ +++F+ M +RN SWN +I GYA NG E L FKRM+ EG V
Sbjct: 369 LDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG-VDVT 427
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
D +++ L AC LG LD + VH G + NV V NALI MY KC + A VF+
Sbjct: 428 DVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFD 487
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ K ++WN +I G +G A+ LF M+ PD T + I+ A
Sbjct: 488 ELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPA 538
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 180/395 (45%), Gaps = 22/395 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A ++ L + +H V G ++ ++ I+ + + ARK+FD + D+N V
Sbjct: 338 ADAQALGACREVHAF---AVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSV 394
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWNAM GYA+N + LF +M + L +C ++ L EG +H L+
Sbjct: 395 SWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELL 454
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
++ G +N+ V ALI +Y K + A +VF E+ + V W +MI G G A
Sbjct: 455 VRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAV 514
Query: 187 CLFELAP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGY 238
LF + D +I+ D+ + ++AR + + +DV ++ Y
Sbjct: 515 RLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMY 574
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G V + LF +R+V +WN +I GY ++G ++ F+ M + G+V PN+ T
Sbjct: 575 AKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV-PNETTF 633
Query: 299 VTVLSACARLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
++VLSAC+ G +D + + E G + + ++D+ + G + A M
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+ G++++G GA L ++ A E
Sbjct: 694 ME---------PGISVYGAMLGACKLHKNVELAEE 719
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L AF M P T ++L CA L + VH G AL +
Sbjct: 209 LAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALAN 268
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA-GEMPDGI 397
MYAKC +A VF+ M +D + WN +++G A +G A+ + M+ GE PD +
Sbjct: 269 MYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAV 328
Query: 398 TFIGILCACT 407
T + +L AC
Sbjct: 329 TLVSVLPACA 338
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/534 (36%), Positives = 301/534 (56%), Gaps = 11/534 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + +G+ + ++ ++ + A K F +N+V WN M Y Q +
Sbjct: 383 QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLD 442
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F QM+ +PN FT+P +L++C + AL GE++H V+K GF+ N++V +
Sbjct: 443 NLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
LI++Y+ + A ++ + E +VV WT+MI GY+ A LFE R
Sbjct: 503 VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
D I + + +S +R + + +++ Q D+ N ++S YA G ++E F
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGA 310
E++ ++N SWN L+ G A +G F E L F RML TE V N T + +SA A L
Sbjct: 623 EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV--NMFTYGSAISAAASLAN 680
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+ + +H GY V N+LI +YAK G I +A FN M +++I+WN +I+G
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITG 740
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ HG G AL LF EMK G MP+ +TF+G+L AC+H+GLV+EGL YF+SM + +VP
Sbjct: 741 YSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVP 800
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ EHY C+VDLL RAG+L A++++K MPI ADA+IW LL +C ++KN+E+ E A L
Sbjct: 801 KSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHL 860
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP++ A +V++SNIY +W + M+D G KK PG S IEV V
Sbjct: 861 LELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAV 914
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 215/446 (48%), Gaps = 16/446 (3%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
++ Q+ ++ G + S + +I ++ + A+K+F+ I +++V+W AM +G +
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN ++LF M + P + VL + KI GE+LHCLV+K GF + +
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------ 190
V L+ LYS + + +A ++F M+ R+ V + S+I+G + G A LF
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEE 246
L P D I +++S V + + +L K D+I ++L Y+ DVE
Sbjct: 358 LKP--DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ F N+ WN ++ Y + + F++M EG + PN T ++L C
Sbjct: 416 AHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCT 474
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LGAL + +H + G+Q NV V + LIDMYAK G + A+ + + D+++W
Sbjct: 475 SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTA 534
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMD 425
+I+G H + AL LF EM+ G D I F + AC + + +G + QS A
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEA 451
+ I + ++ L AR GR+ EA
Sbjct: 595 FGADLSINN--ALISLYARCGRIQEA 618
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 237/491 (48%), Gaps = 25/491 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ ++ SG + + ++ + A K+FD+ ++++V SWN M + + +
Sbjct: 79 RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVG 138
+ V LF +M PN +TF VLK+CV + A +++H GF ++ V
Sbjct: 139 SNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA 198
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI+LYS IE+A KVF + +++V W +MI+G G A LF ++
Sbjct: 199 NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIF 258
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW---------NTMLSGYANNGDVEECKR 249
++S + I+ +L +Q+ VI W N +++ Y+ + + +R
Sbjct: 259 PTPYVLSSVLSASTKIQLFELGEQLHCL-VIKWGFHSETYVCNGLVALYSRSRKLISAER 317
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M R+ S+N LI G G L+ F +M + + P+ T+ ++LSACA +G
Sbjct: 318 IFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC-LKPDCITVASLLSACASVG 376
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL +H +A G ++ + +L+D+Y+KC +E A F + +T++++ WN ++
Sbjct: 377 ALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLV 436
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ + +F +M+ G +P+ T+ IL CT +G + Y + I
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL-----YLGEQIHTHVIK 491
Query: 430 P--QIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Q+ Y C ++D+ A+ G+LA A+ ++R+P E D V W ++ Y ++
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG---YVQHDMFSE 547
Query: 486 ALERLTELEPK 496
AL+ E+E +
Sbjct: 548 ALQLFEEMEYR 558
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 14/397 (3%)
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+ L M++ N + +L+ C+ +L E LHC + K+GF + +L++
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI------ 198
Y A KVF E R+V W MI+ +++ CLF +
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 199 --LWNTIVSGYI--DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+ V G I + + +R + +++ N ++ Y+ NG +E K++F +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKKVFNCI 221
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+++ +W +I G + NGL E + F M +FP + +VLSA ++ +
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ +H G+ V N L+ +Y++ + +A +F++M+++D +++N++ISGL
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G AL LF +M+ PD IT +L AC +G + +G+ S A+ + I
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIIL 399
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G ++DL ++ + A F E + V+W +L
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVML 435
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K QI + V+ +G + ++ +I+ A+ ++ A + F+ ++++NV+SWNAM GY
Sbjct: 682 KQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGY 741
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-------LHCLVLK 128
+Q+ + LF +MK MPN TF VL +C I ++EG + +H LV K
Sbjct: 742 SQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPK 801
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----V 183
+ +++L ++ A + EM + ++W ++++ + +I
Sbjct: 802 SEHY------VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIE---ARKLF-DQMPKKD 227
+A L EL PE D + I + Y R I +RKL D+ KK+
Sbjct: 856 AAHHLLELEPE-DSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKE 902
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 291/529 (55%), Gaps = 43/529 (8%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL--DAMPNCFTFPIVLKSC 110
AR +FD + + + ++ H+ ++ F+ + + D P C P+V+KSC
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCV--PLVVKSC 95
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ A R+G+++HC + G +IFV TAL++ Y+ ++ A KVF EM ++ +
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKK 226
+I GY GD+V AR LF+ R WN++++ Y EA +LF +M +
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 227 DVISWNTMLSGYANNGDVE----------------------------------ECKRLFE 252
+ I+ TM S A GD+E E +R F+
Sbjct: 216 NAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFD 275
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M +R+V +W+ +I GYA NG E L+ F+RM PN+ T+V VLSACA+LG+ +
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATS-CKPNEVTLVGVLSACAQLGSDE 334
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ + E +G+ALIDMY KCG + A VFN M+ K +ITWN+++ GLA
Sbjct: 335 LGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLA 394
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
++G A++L+ EM P+ ITF+ +L ACTH GLV++G+S+F+ M + + PQ+
Sbjct: 395 LNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQV 454
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH C+VDLL ++GRL EA F+ M +E +AVIW+ LL +CR + +VELA+LA +L
Sbjct: 455 EHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLV 514
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LEP N + +V+LSNIY D G W DV I+ MR +KL S IE++
Sbjct: 515 LEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELD 563
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 22/351 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ + AR++FD + + SWN+M YA ++ + LF +M A PN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T + C K L G+ L+ + + N+ V TAL+E+Y +AI+ A + F
Sbjct: 217 AITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAIDEARREFD 275
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M +R+VV W++MI GY G + LFE + G + + + +L
Sbjct: 276 RMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDEL 335
Query: 220 FDQMPKKDVISWNTMLSGYANN---------GDVEECKRLFEEMPERNVFSWNGLIGGYA 270
Q+ V S N L+ Y + G V + +F M + V +WN ++ G A
Sbjct: 336 GGQI-GSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLA 394
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNG 325
NG + + +K M TE V PN+ T V +L+AC G +D F + ++
Sbjct: 395 LNGFAQDAITLYKEM-TEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQ 453
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C+ +D+ K G + A M+ + + + W+T++S H
Sbjct: 454 VEHCACI----VDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHA 500
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + V + L + Y+ +I + + AR +F+++ + V++WN+M G A N
Sbjct: 338 QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNG 397
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EELHCLVLKNGFRANI 135
F + + L+ +M + D PN TF +L +C + +G +E+ + + +
Sbjct: 398 FAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTI---HHVSPQV 454
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLFE 190
+++L + AYK +M+ E N V+W+++++ + D+ ++A L
Sbjct: 455 EHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLV 514
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
L P+ I + + + Y D + R++ D M K+V
Sbjct: 515 LEPDNSSI-YVLLSNIYADAGLWGDVREIRDLMRSKNV 551
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/583 (34%), Positives = 305/583 (52%), Gaps = 54/583 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNVV 66
E + + L Q+ + +GL + R++ CA + A + N
Sbjct: 43 ESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILARASPGPNAY 102
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREG------ 119
M G+ + + LF ++ + D +P + TF +K+ G
Sbjct: 103 MLGTMMRGFLRARLPARALGLFRRVVR-DRLPADARTFVFAVKAAAAAAESEHGGTPSGG 161
Query: 120 EELHCLVLKNGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
E +HC LK GF ++ VG AL+ Y+ K+++ A KVF EM ER+VV WT++++GY
Sbjct: 162 EAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYAR 221
Query: 179 CGDIVSARCLF----------------------------------------ELAPERDVI 198
G A LF E R V
Sbjct: 222 AGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVN 281
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
L N +V + + AR++FD M KDV SW +M++ YA GD+E ++LF++MP RN
Sbjct: 282 LDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRN 341
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
V SW+ +I Y+ E + F+ M+ G V P DAT+V+VLSACA+LG LD +W++
Sbjct: 342 VVSWSCMIAAYSQLNQPEEAVWLFREMIAAG-VDPIDATLVSVLSACAQLGCLDLGRWIY 400
Query: 319 V-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
Y N V +GNALIDM+AKCG + A +F+ M +++++WNT+I A+HG+
Sbjct: 401 ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQS 460
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A+ LF ++K +PD ITF+G+L +C+H GLV EG YF+ M M Y I P++EHY C
Sbjct: 461 EEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYAC 520
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
M+DLL + G L EA + + MP+EAD W LL +CR++ NVE+ ++L EL+P +
Sbjct: 521 MIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSD 580
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+V++S IY +W V +++ MRD G KK PGCSSIEV
Sbjct: 581 SGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEV 623
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 288/535 (53%), Gaps = 66/535 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK---QMTYARKMFDKITDQNVV 66
++ T + QIQT + SG K Y +II+ CA +++A ++F + ++
Sbjct: 18 DKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTF 77
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + +A+ R ++LF M + +PN +T+ + K+C +N L G HC
Sbjct: 78 IWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLACHCQS 137
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K G+ FV L+ +++ +FG MD SAR
Sbjct: 138 IKLGWEFYDFVQNGLVHMFA----------IFGCMD---------------------SAR 166
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
LF+L+ RDVI W +++GY+ ++ R+LFD+MP+++ +SW+ M++GY G EE
Sbjct: 167 KLFDLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEE 226
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LF M LI G+ +PN A IV ++ACA
Sbjct: 227 ALELFNAM----------LISGF----------------------WPNHAGIVCAINACA 254
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LGALD +W+H Y + N + +G ALIDMYAKCG IE A +F + +D+ +
Sbjct: 255 SLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTC 314
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISGLA HG+ A A+ LF M + G +P+ +TF+ +L AC+ MGLV++GL F++M+ Y
Sbjct: 315 LISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIY 374
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
PQ++HYGC+VDLL RAG+L EA VK MP++ D+ + LL + RVY +VEL E
Sbjct: 375 GDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEET 434
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+E L +L + V+LSN+Y +W +VAR++ M D +K+PGCS I+V+
Sbjct: 435 VESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLIKVD 489
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/529 (34%), Positives = 302/529 (57%), Gaps = 11/529 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ G E + +IT + + AR +FD++ ++ +SWNAM +GY +N+
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M++ P+ T V+ +C + R G E+H V+K GF A + V
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI+++S+ + A VF +M+ +++V WT+MI+GY G A + + V+
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVP 395
Query: 200 WNTIVSGYIDV---RNMIEARKLFDQMPKKD-----VISWNTMLSGYANNGDVEECKRLF 251
++ + +++ + + + VI N+++ Y+ +++ +F
Sbjct: 396 DEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVF 455
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+P +NV SW +I G N FE L F++M+ + PN T+V+VLSACAR+GAL
Sbjct: 456 HRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK--PNSVTLVSVLSACARIGAL 513
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H +A G + + NAL+DMY +CG +E A + FNS + KD+ +WN +++G
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGY 572
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A G+G A+ LFH+M + PD ITF +LCAC+ G+V +GL YF+SM + I P
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPN 632
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HY +VDLL RAGRL +A +F+K+MPI+ D IW LL +CR+Y+NVEL ELA + +
Sbjct: 633 LKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIF 692
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
E++ K+ +++L N+Y D G+W +VAR++ MR+ PGCS +EV
Sbjct: 693 EMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEV 741
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 229/440 (52%), Gaps = 13/440 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ + + A +F K+ ++++ SWN + GYA+ + + L+ +M + P+
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+TFP VL++C + L G E+H V++ GF +++ V ALI +Y I +A VF
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIE 215
M R+ + W +MI+GY + LF E + D++ +++S + +
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 216 ARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
R++ + K ++ N+++ +++ G +E + +F +M +++ SW +I GY
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NGL + ++ + M EG V P++ TI +VLSACA LG LD +H +A+ G V
Sbjct: 375 NGLPEKAVETYTIMEHEG-VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V N+LIDMY+KC I+ A++VF+ + K++I+W +II GL ++ R AL F +M +
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL 493
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+ P+ +T + +L AC +G + G + A+ + ++D+ R GR+ A
Sbjct: 494 K-PNSVTLVSVLSACARIGALSCG-KEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 452 VDFVKRMPIEADAVIWANLL 471
+ + E D W LL
Sbjct: 552 WN--QFNSCEKDVASWNILL 569
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 205/461 (44%), Gaps = 74/461 (16%)
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
++ M++L T+ +L+ C A EG +H V K R + +G AL+ +
Sbjct: 79 LIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSM 138
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG-------------------DIVSA 185
+ + A+ VFG+M ER++ W ++ GY G D+ +
Sbjct: 139 FVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTF 198
Query: 186 RCLF-------ELAP-------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
C+ +LA E DV + N +++ Y+ ++ AR +FD+MP+
Sbjct: 199 PCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPR 258
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+D ISWN M+SGY N E RLF M E FF
Sbjct: 259 RDRISWNAMISGYFENDVCLEGLRLFFMMRE------------------FF--------- 291
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
V P+ T+ +V+SAC LG + VH Y G+ V V N+LI M++ G
Sbjct: 292 -----VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ A VF+ M+ KDL++W +ISG +G A+ + M++ G +PD IT +L A
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA 406
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C +GL+++G+ A + + ++D+ ++ + +A++ R+P + +
Sbjct: 407 CAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVI 464
Query: 466 IWANLLGSCRV-YKNVELAELALERLTELEPKNPANFVMLS 505
W +++ R+ Y++ E + + L+P + +LS
Sbjct: 465 SWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 295/540 (54%), Gaps = 42/540 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSG-LEKSDYITPRIITACAQLKQMT-YARKMFDKITDQNVVS 67
+ + + + Q+ +V G L + I + ++ T +AR +FD+I +
Sbjct: 16 RRCRSLRQIKQVHALMVLRGFLSDPSALRELIFASSVGVRGGTAHARLVFDRIPHPDRFM 75
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDA------MPNCFTFPIVLKSCVKINALREGEE 121
+N + G A + R V ++ +M + A P+ TFP VL++C + A G +
Sbjct: 76 YNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQ 135
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H V+K G ++ FV ALI +++T CGD
Sbjct: 136 VHAHVVKAGCESDAFVRNALIGMHAT-------------------------------CGD 164
Query: 182 IVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+ +A LF+ D + W+ ++SG+ ++ AR+LFD+ P KD++SWN M++ YA
Sbjct: 165 LGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKL 224
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
GD+ + LF+ P+R+V SWN +I GY G + ++ F++M G P+ T++++
Sbjct: 225 GDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEK-PDTVTMLSL 283
Query: 302 LSACARLGALDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
LSACA G +D + +H + ++ + +GNALIDMYAKCG + +A++VF M K
Sbjct: 284 LSACADSGDMDAGRRLHRFLSGRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDK 343
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
++ TWN+II GLA+HG A+ +F +M PD ITF+ +L AC+H G+V++G YF
Sbjct: 344 NVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYF 403
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y I P ++HYGCMVD+L+RAG L EA +F+ M IE + VIW LLG+CR++
Sbjct: 404 NLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGE 463
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ELAE A + L + +FV+LSNIY +G W ++ M D+G K GC+ ++
Sbjct: 464 LELAEHANQELLKARSDASGDFVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVVD 523
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 301/514 (58%), Gaps = 33/514 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A K+FDK+ ++N+V+W M +AQ R + LF M+ +P+ FT+ VL +C +
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA---IEAAYKVFGEMDERNVVVW 169
+ L G++LH V++ G ++ VG +L+++Y+ A ++ + KVF +M E NV+ W
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI-----DVRNMIEA-RKLFDQM 223
T++I Y+ G+ + + L+ ++SG+I ++++A L D
Sbjct: 304 TAIITAYVQSGE----------CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 353
Query: 224 PKKDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V S+ N+++S YA +G +E+ ++ F+ + E+N+ S+N ++ GYA
Sbjct: 354 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 413
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
N E F + G + + T ++LS A +GA+ + +H GY+ N
Sbjct: 414 KNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 472
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
C+ NALI MY++CG IE A VFN M+ +++I+W ++I+G A HG AL +FH+M
Sbjct: 473 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 532
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ IT++ +L AC+H+G++ EG +F SM ++ IVP++EHY CMVDLL R+G L E
Sbjct: 533 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 592
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A++F+ MP+ ADA++W LLG+CRV+ N EL A E + E EP +PA +++LSN++
Sbjct: 593 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 652
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+WKDV +I+ +M++ K GCS IEV V
Sbjct: 653 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 686
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 217/412 (52%), Gaps = 20/412 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNE 79
+ +++ SGLE + +I+ ++ AR +F+ + ++ ++VSW+AM + +A N
Sbjct: 48 VHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS 107
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVG 138
+ F M +L PN + F V+++C N GE ++ V+K G+ A++ VG
Sbjct: 108 MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVG 167
Query: 139 TALIELYSTGKA-IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---ELA-- 192
LI+++ G + +AYKVF +M ERN+V WT MI + G A LF EL+
Sbjct: 168 CELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGY 227
Query: 193 -PERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYAN---NGDV 244
P+R +++++S ++ + ++L ++ + DV +++ YA +G V
Sbjct: 228 VPDR--FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 285
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNG-LFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
++ +++FE+MPE NV SW +I Y +G E ++ F +M++ G + PN + +VL
Sbjct: 286 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLK 344
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
AC L + V+ YA G CVGN+LI MYA+ G +E+A F+ + K+L++
Sbjct: 345 ACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVS 404
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+N I+ G A + + A LF+E+ + G TF +L +G + +G
Sbjct: 405 YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 456
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 182/380 (47%), Gaps = 25/380 (6%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + +A P+ T+ I+LKSC++ + G+ +H ++++G + V LI LYS
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 151 IEAAYKVFGEM-DERNVVVWTSMI----NGYISCGDIVSARCLFELAPERDVILWNTIV- 204
E A +F M ++R++V W++M+ N + I + + EL + + ++
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136
Query: 205 ----SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN-NGDVEECKRLFEEMPERNV 259
+ Y V +I + + DV ++ + +GD+ ++F++MPERN+
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 196
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+W +I +A G + +D F M G V P+ T +VLSAC LG L K +H
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLHS 255
Query: 320 YAEYNGYQGNVCVGNALIDMYAKC---GIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
G +VCVG +L+DMYAKC G ++++ VF M ++++W II+ G
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 315
Query: 377 -GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A+ LF +M + P+ +F +L AC ++ Y Y++ I
Sbjct: 316 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL-----SDPYTGEQVYSYAVKLGIASV 370
Query: 436 GC----MVDLLARAGRLAEA 451
C ++ + AR+GR+ +A
Sbjct: 371 NCVGNSLISMYARSGRMEDA 390
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + V G+ + + +I+ A+ +M ARK FD + ++N+VS+NA+ +GYA+N
Sbjct: 357 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 416
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+LF ++ + FTF +L I A+ +GE++H +LK G+++N +
Sbjct: 417 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 476
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI +YS IEAA++VF EM++RNV+ WTSMI G+ G A +F E +
Sbjct: 477 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 536
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRL 250
+ I + ++S V + E +K F+ M K+ I + M+ +G + E
Sbjct: 537 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 596
Query: 251 FEEMP-ERNVFSWNGLIGG 268
MP + W L+G
Sbjct: 597 INSMPLMADALVWRTLLGA 615
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 31/235 (13%)
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
F LD ++T+ P+ T +L +C R K VH +G + + V N
Sbjct: 11 FSTLD----LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 66
Query: 336 LIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
LI +Y+KCG E A +F M K DL++W+ ++S A + A+ F +M G P
Sbjct: 67 LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 126
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY------GC-MVDLLAR-AG 446
+ F ++ AC++ G + Y V + + GC ++D+ + +G
Sbjct: 127 NEYCFAAVIRACSNANYAWVG-------EIIYGFVVKTGYLEADVCVGCELIDMFVKGSG 179
Query: 447 RLAEAVDFVKRMPIEADAVIWANL------LGSCR----VYKNVELAELALERLT 491
L A +MP E + V W + LG R ++ ++EL+ +R T
Sbjct: 180 DLGSAYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFT 233
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/536 (35%), Positives = 305/536 (56%), Gaps = 25/536 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ G E + +IT + + AR +FD++ ++ +SWNAM +GY +N+
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M++ P+ T V+ +C + R G E+H V+K GF A + V
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN 335
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI+++S+ + A VF +M+ +++V WT+MI+GY G L E A E I+
Sbjct: 336 SLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG-------LPEKAVETYTIM 388
Query: 200 WNT-IVSGYIDVRNMIEARKLFDQMPK--------------KDVISWNTMLSGYANNGDV 244
+ +V I + +++ A + K VI N+++ Y+ +
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
++ +F +P +NV SW +I G N FE L F++M+ + PN T+V+VLSA
Sbjct: 449 DKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK--PNSVTLVSVLSA 506
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CAR+GAL K +H +A G + + NAL+DMY +CG +E A + FNS + KD+ +W
Sbjct: 507 CARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASW 565
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +++G A G+G A+ LFH+M + PD ITF +LCAC+ G+V +GL YF+SM
Sbjct: 566 NILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEH 625
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ I P ++HY +VDLL RAGRL +A +F+K+MPI+ D IW LL +CR+Y+NVEL E
Sbjct: 626 KFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGE 685
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
LA + + E++ K+ +++L N+Y D G+W +VAR++ MR+ PGCS +EV
Sbjct: 686 LAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEV 741
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 229/440 (52%), Gaps = 13/440 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ + + A +F K+ ++++ SWN + GYA+ + + L+ +M + P+
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+TFP VL++C + L G E+H V++ GF +++ V ALI +Y I +A VF
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIE 215
M R+ + W +MI+GY + LF E + D++ +++S + +
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 216 ARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
R++ + K ++ N+++ +++ G +E + +F +M +++ SW +I GY
Sbjct: 315 GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NGL + ++ + M EG V P++ TI +VLSACA LG LD +H +A+ G V
Sbjct: 375 NGLPEKAVETYTIMEHEG-VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V N+LIDMY+KC I+ A++VF+ + K++I+W +II GL ++ R AL F +M +
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSL 493
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+ P+ +T + +L AC +G + G + A+ + ++D+ R GR+ A
Sbjct: 494 K-PNSVTLVSVLSACARIGALSCG-KEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 452 VDFVKRMPIEADAVIWANLL 471
+ + E D W LL
Sbjct: 552 WN--QFNSCEKDVASWNILL 569
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 202/453 (44%), Gaps = 74/453 (16%)
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
++ M++L T+ +L+ C A EG +H V K R + +G AL+ +
Sbjct: 79 LIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSM 138
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG-------------------DIVSA 185
+ + A+ VFG+M ER++ W ++ GY G D+ +
Sbjct: 139 FVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTF 198
Query: 186 RCLF-------ELAP-------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
C+ +LA E DV + N +++ Y+ ++ AR +FD+MP+
Sbjct: 199 PCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPR 258
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+D ISWN M+SGY N E RLF M E FF
Sbjct: 259 RDRISWNAMISGYFENDVCLEGLRLFFMMRE------------------FF--------- 291
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
V P+ T+ +V+SAC LG + VH Y G+ V V N+LI M++ G
Sbjct: 292 -----VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGC 346
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ A VF+ M+ KDL++W +ISG +G A+ + M++ G +PD IT +L A
Sbjct: 347 WDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSA 406
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C +GL+++G+ A + + ++D+ ++ + +A++ R+P + +
Sbjct: 407 CAGLGLLDKGI-MLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVI 464
Query: 466 IWANLLGSCRV-YKNVELAELALERLTELEPKN 497
W +++ R+ Y++ E + + L+P +
Sbjct: 465 SWTSIILGLRLNYRSFEALFFFQQMILSLKPNS 497
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 311/579 (53%), Gaps = 52/579 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITD-QNVV 66
E+ + QI ++ + L + R++ +A + + + A +F+ T N+
Sbjct: 39 EKCNSRTQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLY 98
Query: 67 SWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+N M G+ NE ++ M + P+ TF +L++ + E +++HC
Sbjct: 99 IFNTMILGFPFSNE---KAFTIYRSMLQNGTYPDRQTFLYLLQT---TKFVAEVKQIHCH 152
Query: 126 VLKNGFRANI-FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
L G + ++ +LI+ Y E A ++F EM +RNVV + +MI G+ G+I+
Sbjct: 153 ALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILG 212
Query: 185 ARCLFE------LAPE---------------------------------RDVILWNTIVS 205
LF L P+ ++IL+N ++
Sbjct: 213 ILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLD 272
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
Y+ + ARK+FD +KD +SWNT+++GYA G++E LF ++P R++ SWN L
Sbjct: 273 MYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSL 332
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GYA NG + V F RM E V P+ TIV ++SA A +GALD +W+H A
Sbjct: 333 ISGYAQNGDYVTVKCLFTRMFAEN-VKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKML 391
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ G+ALIDMY KCG IE A +FN + KD+ TW T+I+G A HG G AL LF
Sbjct: 392 TKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFS 451
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M+ A P+ +TF+ +L AC+H GLV+EGL F SM YSI P +EHYGC+VDLL R+
Sbjct: 452 VMQ-AETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRS 510
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
GRL +A+ +++MP+E IW +L +CR+++N+ELAE AL L +LEP+ +++LS
Sbjct: 511 GRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLS 570
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N+Y GRW I+ M G KK+ GCSS+ V+ +V
Sbjct: 571 NVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMV 609
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 294/535 (54%), Gaps = 41/535 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
++T A+ ++ AR++FD++ D+NVVSWNAM +GY +N LF D MP
Sbjct: 111 LLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELF------DMMPS 164
Query: 99 -NCFTFPIVLKSCVKINALREGEELH----------CLVLKNGF---------------- 131
N ++ ++ +K LRE EL C L +G+
Sbjct: 165 RNDVSWLTMISGYIKKRRLREARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELFGRM 224
Query: 132 -RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
R + +I Y+ ++ A +F EM +++ + WT+++ GY+ GD+ ++ +F+
Sbjct: 225 QRRDPVSWNVMITGYARAGRMQVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQ 284
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P+RDV+ WNT++ G++ + +A +LF +MP++D++SWNT+L G+ GD+
Sbjct: 285 DIPDRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQGHVQQGDMATANTW 344
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F MPE++ SWN LI G+ + G A + G + P++AT+ V+S CA L A
Sbjct: 345 FRGMPEKDETSWNTLISGHKDEGAL-----ALLSEMIRGGLRPDEATLSVVISICASLVA 399
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L + K VH+YA G++ + V ++LI MY+KCG+I A VF + +D +TWN +I+
Sbjct: 400 LGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIAT 459
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HG + AL LF++M G PD TF+ +L AC H G + EG YF+SM D+++ P
Sbjct: 460 YAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTP 519
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ +HY CMVDLL R G + +A DF +++P + W L +C + +V+L E+ + +
Sbjct: 520 RSDHYSCMVDLLGRLGFIYQAYDFTRKIPSDLQINAWETLFSACNAHGDVQLGEVIAKDV 579
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN-EVV 544
+ P + + +L+NIY W A ++ M++ G KK GCS +E+ EVV
Sbjct: 580 LQARPSDGGMYTLLANIYASKEMWSSAASVRGVMKEQGLKKETGCSWVELKGEVV 634
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 158/338 (46%), Gaps = 50/338 (14%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+IF A+I + + AA +VF EM ERNV W MI+G + + AR +F+ P
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
R+ + W +++GY + EAR+LFD+MP ++V+SWN M+SGY NG VE + LF+
Sbjct: 102 VRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDM 161
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP RN SW +I GY KR L E R D
Sbjct: 162 MPSRNDVSWLTMISGYIK-----------KRRLREAREL------------------FDL 192
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
S + +VC NAL+ Y +++A ++F M +D ++WN +I+G A
Sbjct: 193 SP---------SHPTSVC--NALLSGYVALSCLKDAEELFGRMQRRDPVSWNVMITGYAR 241
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
GR A SLF EM D I++ ++ G V+ FQ + D +V
Sbjct: 242 AGRMQVAQSLFDEMPQK----DTISWTAVMRGYLQNGDVDASWKVFQDIP-DRDVVA--- 293
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ M+ ++ RL +A+ MP E D V W +L
Sbjct: 294 -WNTMMGGFVQSERLDDALRLFAEMP-ERDLVSWNTIL 329
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL+ ++T G E + +I+ ++ + A ++F + ++ V+WNAM YA
Sbjct: 407 HLYAVKT-----GFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYA 461
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + LF +M K P+ TF VL +C L EG
Sbjct: 462 YHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEG 504
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 294/560 (52%), Gaps = 71/560 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +V+ +GL + + +I+ A+ + AR++FD + ++ VSW + YA++
Sbjct: 166 EVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 225
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + + + M + P+ T+ VL +C + AL +G+++H ++++ +++ V T
Sbjct: 226 YAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST 285
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL ++Y I CG + AR +FE P RDVI
Sbjct: 286 ALTKMY-------------------------------IKCGAVKDAREVFECLPNRDVIA 314
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKK--------------------------------- 226
WNT++ G +D + EA +F +M K+
Sbjct: 315 WNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAV 374
Query: 227 ------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
DV N +++ Y+ G +++ +++F+ MP+R+V SW L+GGYA+ G E
Sbjct: 375 KDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFS 434
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
FK+ML +G V N T + VL AC+ AL + K +H G ++ V NAL+ MY
Sbjct: 435 TFKKMLQQG-VEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMY 493
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
KCG +E+A+ V M T+D++TWNT+I GLA +GRG AL F MK+ P+ TF+
Sbjct: 494 FKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFV 553
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
++ AC LVEEG F SM DY IVP +HY CMVD+LARAG L EA D + MP
Sbjct: 554 NVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPF 613
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
+ A +W LL +CR + NVE+ E A E+ +LEP+N +V LS IY G W+DVA++
Sbjct: 614 KPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKL 673
Query: 521 KVAMRDTGFKKLPGCSSIEV 540
+ M++ G KK PG S IEV
Sbjct: 674 RKLMKERGVKKEPGRSWIEV 693
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 192/382 (50%), Gaps = 11/382 (2%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ + + +L+SCVK L G+++H +L+ G + N+++ L++LY ++ A ++F
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTIVSGYIDVRNMI 214
+ ++VV W MI+GY G A LF L E D + +I+S +
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALN 162
Query: 215 EAR----KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
R ++ + + N ++S YA G V + +R+F+ M R+ SW L G YA
Sbjct: 163 WGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 222
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G E L + ML EG V P+ T + VLSAC L AL+ K +H + + +V
Sbjct: 223 ESGYAQESLKTYHAMLQEG-VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V AL MY KCG +++A +VF + +D+I WNT+I GL G+ A +FH M
Sbjct: 282 RVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKE 341
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD +T++ IL AC G + G + A+ +V + ++++ ++AG + +
Sbjct: 342 CVAPDRVTYLAILSACARPGGLACG-KEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400
Query: 451 AVDFVKRMPIEADAVIWANLLG 472
A RMP + D V W L+G
Sbjct: 401 ARQVFDRMP-KRDVVSWTALVG 421
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V +L +C + L K VH + G + NV + N L+ +Y CG + A +F+
Sbjct: 48 VKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSN 107
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K +++WN +ISG A G G A +LF M+ G PD TF+ IL AC+ + G
Sbjct: 108 KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGRE- 166
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
M+ + ++ + A+ G + +A M D V W L G+
Sbjct: 167 VHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTGA 220
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/503 (36%), Positives = 299/503 (59%), Gaps = 17/503 (3%)
Query: 56 MFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
+F++ D+ +V SWN++ A++ ++ F+ M+KL P +FP +K+C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ G++ H G++++IFV +ALI +YST +E A KVF E+ +R++V WTSMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150
Query: 175 GYISCGDIVSARCLFE--LAPERD----VILWNTIVSGYIDVRNMIEARKLFDQMPK--- 225
GY G+ + A LF+ L E D + L + + I + + A+ L + +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 226 -----KDVISWNTMLSGYANNGD--VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ V NT+L YA G+ V +++F+++ +++ S+N ++ YA +G+ E
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+ F+R++ V N T+ TVL A + GAL K +H G + +V VG ++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG +E A F+ M K++ +W +I+G MHG A AL LF M ++G P+ IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC+H GL EG +F +M + + P +EHYGCMVDLL RAG L +A D ++RM
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
++ D++IW++LL +CR++KNVELAE+++ RL EL+ N +++LS+IY D GRWKDV
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
R+++ M++ G K PG S +E+N
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELN 533
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 176/379 (46%), Gaps = 30/379 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q G + +++ +I + ++ ARK+FD+I +++VSW +M GY N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNG 156
Query: 80 FHRTVVVLFTQM-----KKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
V LF + DAM + V+ +C ++ A E +H V+K GF
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 134 NIFVGTALIELYSTG--KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ VG L++ Y+ G + A K+F ++ +++ V + S+++ Y G A +F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 192 APERDVILWNTIV----------SGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSG 237
+ V+ +N I SG + + I DQ+ + DVI +++
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH-----DQVIRMGLEDDVIVGTSIIDM 331
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G VE ++ F+ M +NV SW +I GY +G + L+ F M+ G V PN T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYIT 390
Query: 298 IVTVLSACARLG-ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
V+VL+AC+ G ++ +W + G + + ++D+ + G ++ A D+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 357 DTK-DLITWNTIISGLAMH 374
K D I W+++++ +H
Sbjct: 451 KMKPDSIIWSSLLAACRIH 469
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
+HS L K +H QV+ GLE + II + ++ ARK FD++ ++NV
Sbjct: 298 SHSGALRIGKCIHD---QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW AM GY + + LF M PN TF VL +C EG + +
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM 414
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGYISC 179
+ G + +++L ++ AY + M + + ++W+S+ I+ +
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVEL 474
Query: 180 GDIVSARCLFEL 191
+I AR LFEL
Sbjct: 475 AEISVAR-LFEL 485
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 301/514 (58%), Gaps = 33/514 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A K+FDK+ ++N+V+W M +AQ R + LF M+ +P+ FT+ VL +C +
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA---IEAAYKVFGEMDERNVVVW 169
+ L G++LH V++ G ++ VG +L+++Y+ A ++ + KVF +M E NV+ W
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI-----DVRNMIEA-RKLFDQM 223
T++I Y+ G+ + + L+ ++SG+I ++++A L D
Sbjct: 322 TAIITAYVQSGE----------CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 371
Query: 224 PKKDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V S+ N+++S YA +G +E+ ++ F+ + E+N+ S+N ++ GYA
Sbjct: 372 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 431
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
N E F + G + + T ++LS A +GA+ + +H GY+ N
Sbjct: 432 KNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 490
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
C+ NALI MY++CG IE A VFN M+ +++I+W ++I+G A HG AL +FH+M
Sbjct: 491 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 550
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ IT++ +L AC+H+G++ EG +F SM ++ IVP++EHY CMVDLL R+G L E
Sbjct: 551 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 610
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A++F+ MP+ ADA++W LLG+CRV+ N EL A E + E EP +PA +++LSN++
Sbjct: 611 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 670
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+WKDV +I+ +M++ K GCS IEV V
Sbjct: 671 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 704
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 217/412 (52%), Gaps = 20/412 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNE 79
+ +++ SGLE + +I+ ++ AR +F+ + ++ ++VSW+AM + +A N
Sbjct: 66 VHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNS 125
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVG 138
+ F M +L PN + F V+++C N GE ++ V+K G+ A++ VG
Sbjct: 126 MEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVG 185
Query: 139 TALIELYSTGKA-IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---ELA-- 192
LI+++ G + +AYKVF +M ERN+V WT MI + G A LF EL+
Sbjct: 186 CELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGY 245
Query: 193 -PERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYAN---NGDV 244
P+R +++++S ++ + ++L ++ + DV +++ YA +G V
Sbjct: 246 VPDR--FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSV 303
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNG-LFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
++ +++FE+MPE NV SW +I Y +G E ++ F +M++ G + PN + +VL
Sbjct: 304 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLK 362
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
AC L + V+ YA G CVGN+LI MYA+ G +E+A F+ + K+L++
Sbjct: 363 ACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVS 422
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+N I+ G A + + A LF+E+ + G TF +L +G + +G
Sbjct: 423 YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 474
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 182/380 (47%), Gaps = 25/380 (6%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + +A P+ T+ I+LKSC++ + G+ +H ++++G + V LI LYS
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 151 IEAAYKVFGEM-DERNVVVWTSMI----NGYISCGDIVSARCLFELAPERDVILWNTIV- 204
E A +F M ++R++V W++M+ N + I + + EL + + ++
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154
Query: 205 ----SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN-NGDVEECKRLFEEMPERNV 259
+ Y V +I + + DV ++ + +GD+ ++F++MPERN+
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNL 214
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+W +I +A G + +D F M G V P+ T +VLSAC LG L K +H
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLHS 273
Query: 320 YAEYNGYQGNVCVGNALIDMYAKC---GIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
G +VCVG +L+DMYAKC G ++++ VF M ++++W II+ G
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 333
Query: 377 -GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A+ LF +M + P+ +F +L AC ++ Y Y++ I
Sbjct: 334 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL-----SDPYTGEQVYSYAVKLGIASV 388
Query: 436 GC----MVDLLARAGRLAEA 451
C ++ + AR+GR+ +A
Sbjct: 389 NCVGNSLISMYARSGRMEDA 408
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 10/259 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + V G+ + + +I+ A+ +M ARK FD + ++N+VS+NA+ +GYA+N
Sbjct: 375 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 434
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+LF ++ + FTF +L I A+ +GE++H +LK G+++N +
Sbjct: 435 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 494
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI +YS IEAA++VF EM++RNV+ WTSMI G+ G A +F E +
Sbjct: 495 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 554
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRL 250
+ I + ++S V + E +K F+ M K+ I + M+ +G + E
Sbjct: 555 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 614
Query: 251 FEEMP-ERNVFSWNGLIGG 268
MP + W L+G
Sbjct: 615 INSMPLMADALVWRTLLGA 633
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 31/235 (13%)
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
F LD ++T+ P+ T +L +C R K VH +G + + V N
Sbjct: 29 FSTLD----LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 84
Query: 336 LIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
LI +Y+KCG E A +F M K DL++W+ ++S A + A+ F +M G P
Sbjct: 85 LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 144
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY------GC-MVDLLAR-AG 446
+ F ++ AC++ G + Y V + + GC ++D+ + +G
Sbjct: 145 NEYCFAAVIRACSNANYAWVG-------EIIYGFVVKTGYLEADVCVGCELIDMFVKGSG 197
Query: 447 RLAEAVDFVKRMPIEADAVIWANL------LGSCR----VYKNVELAELALERLT 491
L A +MP E + V W + LG R ++ ++EL+ +R T
Sbjct: 198 DLGSAYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFT 251
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 286/532 (53%), Gaps = 62/532 (11%)
Query: 15 TKHLHQIQTQVVTSGLEK--SDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
TK L QIQ Q++T+ + I ++I ACA + +A+ +F ++ + NV SWNA+
Sbjct: 24 TKQLLQIQAQLITNPPLSLHPNLIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAII 83
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+ + F + L + PN
Sbjct: 84 KAHINCGAWEHALNCFNRQLSLPSAPN--------------------------------- 110
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
N ++ T+LI+ + +AI KV VV+ + + N
Sbjct: 111 PNEYIYTSLIKACAGLEAIADGLKVHA------VVIKSGLDN------------------ 146
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
++ L ++V Y R A ++FD+MP +DV+SWNTM+SGY GD+E +R+F+
Sbjct: 147 ---NIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFD 203
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+M ER+V SWN +IGGY NG + + ++ F M G V P+D T+V+VLSACA +GALD
Sbjct: 204 QMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALD 263
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
F +W+ + + G N+ +GNALIDMYAKCG +E A +F+ M +D+I+W+T+I G
Sbjct: 264 FGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSG 323
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG A + +M G P+ +TF+G+L AC+H GLV++G+ F M +Y IVP++
Sbjct: 324 THGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKV 383
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
HYGC++DLL+RAGRL EA D + MPIE + ++W LLG CR++K+ E + L E
Sbjct: 384 GHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLE 443
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ + ++V ++ +GR D A + M+ G K PGCS IEV+ V
Sbjct: 444 LDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKIEVHNTV 495
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/533 (36%), Positives = 284/533 (53%), Gaps = 70/533 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
HL Q+Q + T G + + ++I C L +TYAR +FD I N + AM Y
Sbjct: 21 HLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDHIPSLNTHLFTAMITAY 80
Query: 76 AQNE-FHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
A + H + + LF M + PN F FP LK+C + A E LH ++K+GF
Sbjct: 81 AAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPESCA---AESLHAQIVKSGFH- 136
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
VV T++++ Y
Sbjct: 137 ------------------------------EYPVVQTALVDSY----------------- 149
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+ VSG + A+K+FD+M + V+S+ M+SG+A GDVE R+F E
Sbjct: 150 --------SKVSG-----GLGNAKKVFDEMSDRSVVSFTAMVSGFARVGDVESAVRVFGE 196
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
M +R+V SWN LI G NG F + ++ F+RM+ E PN T+V LSAC +G L
Sbjct: 197 MLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNR-PNGVTVVCALSACGHMGMLQL 255
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+W+H Y NG + V NAL+DMY KCG + A VF K L +WN++I+ A+
Sbjct: 256 GRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSWNSMINCFAL 315
Query: 374 HGRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG+ A+++F +M G PD +TF+G+L ACTH GLVE+G YF+ M +Y I PQ
Sbjct: 316 HGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQ 375
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGC++DLL RAGR EA+D VK M +E D V+W +LL C+V+ +LAE A ++L
Sbjct: 376 IEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLI 435
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E++P N +ML+N+YG+LG+W +V + ++ K+PGCS IEV++ V
Sbjct: 436 EIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVDDQV 488
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 297/529 (56%), Gaps = 10/529 (1%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I V G E I+ +T + + + + F + +N+ S N + +G+ E
Sbjct: 112 IHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTET 171
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ Q+ PN +TF +LK+C L EG+ +H V+K+G + + +
Sbjct: 172 CDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS 231
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L+ +Y+ + A KVFGE+ ER+VV WT++I G+++ G R ++ E
Sbjct: 232 LVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNM 291
Query: 201 NTIVS--------GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
T +S +D+ + A+ + + + D + ++ YA N +E+ + +F
Sbjct: 292 YTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKNRFLEDAETIFN 350
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ +R++F+W ++ GYA +G + + F +M EG V PN+ T+ + LS C+R+ LD
Sbjct: 351 RLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG-VKPNEFTLASSLSGCSRIATLD 409
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ +H A G G++ V +AL+DMYAKCG +E+A VF+ + ++D ++WNTII G +
Sbjct: 410 SGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYS 469
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG+G AL F M + G +PD +TFIG+L AC+HMGL+EEG +F S++ Y I P I
Sbjct: 470 QHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTI 529
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHY CMVD+L RAG+ E F++ M + ++ +IW +LG+C+++ N+E E A +L E
Sbjct: 530 EHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE 589
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LEP+ +N+++LSN++ G W DV ++ M G KK PGCS +EVN
Sbjct: 590 LEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVN 638
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 219/464 (47%), Gaps = 16/464 (3%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +I +V+ +G+ ++ ++ + + + AR++ +++ Q+V WN +
Sbjct: 8 LKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANS 67
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ V LF M+ N F F ++ + + GE +H V K GF ++I +
Sbjct: 68 PYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---SCGDIVSARCLFEL--- 191
A + +Y +++E ++ F M N+ ++++G+ +C R L +L
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQ--GPRILIQLLVE 185
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEEC 247
E ++ + +I+ ++ E + + Q+ K D WN++++ YA G
Sbjct: 186 GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYA 245
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++F E+PER+V SW LI G+ G + L F +ML EG PN T +++L +C+
Sbjct: 246 CKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEG-FNPNMYTFISILRSCSS 303
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L +D K VH N GN VG AL+DMYAK +E+A +FN + +DL W I
Sbjct: 304 LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVI 363
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
++G A G+G A+ F +M+ G P+ T L C+ + ++ G SMA+
Sbjct: 364 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAG 422
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ +VD+ A+ G + +A + V + D V W ++
Sbjct: 423 QSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTII 465
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q+V + L+ +D++ ++ A+ + + A +F+++ +++ +W + GYAQ+
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V F QM++ PN FT L C +I L G +LH + +K G ++FV +
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVAS 431
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
AL+++Y+ +E A VF + R+ V W ++I GY G A FE +
Sbjct: 432 ALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVP 491
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRL 250
D + + ++S + + E +K F+ + K + + M+ G E +
Sbjct: 492 DEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESF 551
Query: 251 FEEMP-ERNVFSWNGLIGGYANNG 273
EEM NV W ++G +G
Sbjct: 552 IEEMKLTSNVLIWETVLGACKMHG 575
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 320/592 (54%), Gaps = 22/592 (3%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQN 64
AH+ L K LH T ++ + S +I ++ + ++ ++F+ T ++N
Sbjct: 40 AHNANLSKGKELH---THLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNKN 96
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V ++NA+ G+ N + + L+ QM+ L P+ FTFP V+++C + ++H
Sbjct: 97 VFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHG 156
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
L+ K G ++FVG+AL+ Y + + AY+VF E+ R+VV+W +M+NG+ G
Sbjct: 157 LMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEE 216
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMI----EARKLFDQMPK----KDVISWNTMLS 236
A +F V+ V+G + + +++ R + + K V+ N ++
Sbjct: 217 ALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALID 276
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y V + +FE M E ++FSWN ++ + G + L F RM+ RV P+
Sbjct: 277 MYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLV 336
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQ--------GNVCVGNALIDMYAKCGIIEN 348
T+ TVL AC L AL + +H Y NG +V + NAL+DMYAKCG + +
Sbjct: 337 TVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRD 396
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A VF +M KD+ +WN +I+G MHG G AL +F M A +P+ I+F+G+L AC+H
Sbjct: 397 ARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSH 456
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G+V+EGL + M Y + P IEHY C++D+L RAG+L EA D V MP +AD V W
Sbjct: 457 AGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWR 516
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
+LL +CR++ + +LAE+A ++ ELEP + N+V++SN+YG +GR+++V + M+
Sbjct: 517 SLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQN 576
Query: 529 FKKLPGCSSIE-VNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFI 579
KK PGCS IE VN V + R + + A N + + Q + + FI
Sbjct: 577 VKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLTAVLQEHGYVPFI 628
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 176/394 (44%), Gaps = 81/394 (20%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDER 164
L+SC L +G+ELH +LKN F + T+LI +YS I+ + +VF +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 165 NVVVWTSMINGYI--------------------------------SCGD-----IVSA-- 185
NV + ++I G++ +CGD +V+
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIH 155
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+F++ E DV + + +V+ Y+ R + EA ++F+++P +DV+ WN M++G+A G E
Sbjct: 156 GLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFE 215
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E L F+RM G V P T+ VLS
Sbjct: 216 -------------------------------EALGVFRRMGGNG-VVPCRYTVTGVLSIF 243
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
+ +G D + VH + GY+ V V NALIDMY KC + +A+ VF MD D+ +WN
Sbjct: 244 SVMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWN 303
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+I+S G G L LF M + + PD +T +L ACTH+ + G M +
Sbjct: 304 SIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVV 363
Query: 425 D-------YSIVPQIEHYGCMVDLLARAGRLAEA 451
+ + + + ++D+ A+ G + +A
Sbjct: 364 NGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDA 397
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 90/176 (51%), Gaps = 8/176 (4%)
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN- 354
T + L +CA L K +H + N + G+ +LI+MY+KC +I++++ VFN
Sbjct: 30 GTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNF 89
Query: 355 -SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
+ K++ +N +I+G + AL+L+++M++ G PD TF ++ AC G +
Sbjct: 90 PTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC---GDDD 146
Query: 414 EGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+G + + + + +++ + +V+ + + EA + +P+ D V+W
Sbjct: 147 DGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR-DVVLW 201
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 283/505 (56%), Gaps = 25/505 (4%)
Query: 57 FDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
F K D+ NV SWN++ A+ + F+ ++KL +P +FP +KSC +
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L G H GF ++FV +ALI++YS ++ A +F E+ RNVV WTSMI G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090
Query: 176 YISCGDIVSARCLFE--LAPERDVILWNTIVSGYIDVRNMIEA----------------- 216
Y+ +A LF+ L E +V N + + + +++ A
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150
Query: 217 -RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
+K FD + NT++ YA G K++F+ M E++ SWN +I YA +GL
Sbjct: 2151 VKKGFDG----SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS 2206
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E L+ F M+ V N T+ VL ACA GAL K +H + NVCVG +
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
+IDMY KCG +E A F+ M K++ +W +++G MHGR AL +F++M AG P+
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 2326
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITF+ +L AC+H GLVEEG +F +M Y I P IEHYGCMVDL RAG L EA + +
Sbjct: 2327 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 2386
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
KRM ++ D V+W +LLG+CR++KNV+L E+A ++L EL+P N +V+LSN+Y D GRW
Sbjct: 2387 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWA 2446
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEV 540
DV R+++ M++ K PG S +E+
Sbjct: 2447 DVERMRMLMKNRQLVKPPGFSLVEL 2471
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 214/417 (51%), Gaps = 56/417 (13%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER- 164
+L++C LR+ +H ++++G + + LI LYST I A +F ++
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 165 ----NVVVWTSMINGY-----------------------------------ISCGDIVSA 185
N+++ + ING I G +V
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
L + DV + N ++ Y + A K+F++M ++V+SW T++SG + GD++
Sbjct: 150 -SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E +R+F+E+P +NV SW +I GY N E L+ FKRM E +FPN+ T+V+++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKAC 267
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
+G L + +H YA N + V +G ALIDMY+KCG I++A++VF +M K L TWN
Sbjct: 268 TEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWN 327
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++I+ L +HG G AL+LF EM+ PD ITFIG+LCAC H+ V+EG +YF M
Sbjct: 328 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM-----------PIEADAVIWANLL 471
Y I P EHY CM +L AR+ L EA K + A V W LL
Sbjct: 388 YGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVAWTQLL 444
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
KHL QI +++ SGL +T ++I + ++ YA +F +I + +WN +
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N ++L+ M + FTFP V+K+C ++ G+ +H ++K GF ++
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDV 160
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV LI+ Y A KVF +M RNVV WT++I+G ISCGD+ AR +F+ P +
Sbjct: 161 FVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK 220
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS------------------------- 230
+V+ W +++GYI + EA +LF +M +++
Sbjct: 221 NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH 280
Query: 231 --------------WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
++ Y+ G +++ +FE MP +++ +WN +I +GL
Sbjct: 281 DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQ 340
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
E L+ F M V P+ T + VL AC +
Sbjct: 341 EALNLFSEM-ERVNVKPDAITFIGVLCACVHI 371
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 176/376 (46%), Gaps = 28/376 (7%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFH 81
Q G E +++ +I ++ Q+ AR +FD+I +NVVSW +M GY QNE
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 82 RTVVVLF-------TQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
++LF T+++ + +P + VL +C +++ E +H V+K GF
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 2157
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+I VG L++ Y+ + KVF M+E++ + W SMI Y G A +F
Sbjct: 2158 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217
Query: 194 ERDVILWNTIVSGYI-----DVRNMIEARKLFDQMPKKD----VISWNTMLSGYANNGDV 244
+ +N + + + + + DQ+ K D V +++ Y G V
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E K+ F+ M E+NV SW ++ GY +G E LD F +M+ G V PN T V+VL+A
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-VKPNYITFVSVLAA 2336
Query: 305 CARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
C+ G ++ F+ H Y G + C ++D++ + G + A ++ M K
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC----MVDLFGRAGCLNEAYNLIKRMKMK 2392
Query: 360 -DLITWNTIISGLAMH 374
D + W +++ +H
Sbjct: 2393 PDFVVWGSLLGACRIH 2408
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ +G + LF ++ F+WN +I NGL + L +K M+ +G + + T
Sbjct: 69 YSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG-IAADKFT 127
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
V+ AC ++D K VH G+ G+V V N LID Y KCG A+ VF M
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR 187
Query: 358 TKDLITWNTIISGLAMHG-------------------------------RGAGALSLFHE 386
+++++W T+ISGL G + AL LF
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKR 247
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE---HYG-CMVDLL 442
M+ P+ T + ++ ACT MG++ G DY+I IE + G ++D+
Sbjct: 248 MQAENIFPNEYTMVSLIKACTEMGILTLGRGIH-----DYAIKNCIEIGVYLGTALIDMY 302
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++ G + +A++ + MP ++ W +++ S V+ L + AL +E+E N
Sbjct: 303 SKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVHG---LGQEALNLFSEMERVN 353
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 112/215 (52%), Gaps = 12/215 (5%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
+ +C L++ AR++FD+I +NVVSW AM NGY +N+ + LF +M+ + PN
Sbjct: 201 LISCGDLQE---ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNE 257
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
+T ++K+C ++ L G +H +KN +++GTALI++YS +I+ A +VF
Sbjct: 258 YTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFET 317
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEA 216
M +++ W SMI G A LF + + D I + ++ + ++N+ E
Sbjct: 318 MPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Query: 217 RKLFDQMPKKDVIS-----WNTMLSGYANNGDVEE 246
F +M + I+ + M YA + +++E
Sbjct: 378 CAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDE 412
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH+ L K +H QV+ LE + + II + ++ A+K FD++ ++NV
Sbjct: 2237 AHAGALRAGKCIHD---QVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW AM GY + + + +F +M + PN TF VL +C + EG + +
Sbjct: 2294 SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAM 2353
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGYISC 179
K I +++L+ + AY + M + + VVW S+ I+ +
Sbjct: 2354 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 2413
Query: 180 GDIVSARCLFELAPE 194
G+I +A+ LFEL P+
Sbjct: 2414 GEI-AAQKLFELDPD 2427
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 86/225 (38%), Gaps = 36/225 (16%)
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ +H +G + + LI +Y+ G I A+ +F + TWN II ++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACT-----------HMGLVEEGLS------ 417
G AL L+ M G D TF ++ ACT H L++ G S
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 418 ------YFQSMAMDYSI-------VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
YF+ +++ V + + ++ L G L EA +P +
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP-SKNV 222
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKN--PANFVMLSNI 507
V W ++ Y + E ALE ++ +N P + M+S I
Sbjct: 223 VSWTAMING---YIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 52/99 (52%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + + +E Y+ +I ++ + A ++F+ + +++ +WN+M +
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + LF++M++++ P+ TF VL +CV I ++EG
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 299/534 (55%), Gaps = 20/534 (3%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMF-DKITDQNVVSWNAMFNGYAQNEFHRT 83
+VTSG +I ++ QM A +F D ++NV ++NA+ G+ N
Sbjct: 1 MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAAD 60
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
+ +M+ + MP+ FTFP V+++C + +R+ +H + K G N+FVG+AL+
Sbjct: 61 GFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEVRK---IHGCLFKMGLELNVFVGSALVN 117
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-- 201
Y E A KVF E+ ER+VV+W +MINGY G + A +F+ E + L
Sbjct: 118 TYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFT 177
Query: 202 -----TIVSGYIDVRNMIEARKLFDQMPKKDVIS-WNTMLSGYANNGDVEECKRLFEEMP 255
+I++ D+ N + +M ++ N ++ Y E+ +FE +
Sbjct: 178 TTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMIN 237
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
E+++FSWN +I + L F +ML RV P+ TI VL AC+ L AL +
Sbjct: 238 EKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGS-RVLPDVITITAVLPACSHLAALMHGR 296
Query: 316 WVHVYAEYNGYQGN-----VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+H Y NG N V + NA++DMYAKCG ++NA +F+ M KD+ +WN +I G
Sbjct: 297 EIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMG 356
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
AMHG G AL +FH M A PD +TF+G+L AC+H G V +G S+ M +++ ++P
Sbjct: 357 YAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIP 416
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
IEHY C++D+L RAG L EA D +R+P+E + ++W LLG+CR++ N EL + E++
Sbjct: 417 TIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKI 476
Query: 491 TELEPKN--PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
T+LEPK+ +++++S++YG +GR+++ ++ M++ KK PGCS IE+ +
Sbjct: 477 TQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKD 530
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 310/584 (53%), Gaps = 47/584 (8%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
GLE+S + R+I A ++ ARK+FD D +VVSW A+ + YA+ R LF
Sbjct: 38 GLEQS-HDPNRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELF 96
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+ DA N T+ +L + + E E L + + N+ ++E Y+
Sbjct: 97 ---DRPDARRNVVTWTALLSGYARARLVDEAEAL----FQRMPQRNVVSWNTMLEAYAAA 149
Query: 149 K-------------------------------AIEAAYKVFGEMDERNVVVWTSMINGYI 177
+++ A ++FG M ER+V+ WT+M++G
Sbjct: 150 GRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVA 209
Query: 178 SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
G + AR LF+ PER+V+ WN ++SGY + EA LF +MP++D+ S N M++G
Sbjct: 210 RSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTG 269
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
+ N D++ + LF+EMPERNV +W ++ GY L F ML G PN T
Sbjct: 270 FIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAG-TRPNQVT 328
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ L AC+ L AL K VH +Q + V +AL+++YAKCG I A +F+
Sbjct: 329 FLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSR 388
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
KDLI+WN II+ A HG G A+ L+ +M+ G P+ +T++ +L AC+H GLV+EGL
Sbjct: 389 EKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLK 448
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE-ADAVIWANLLGSCRV 476
F+SM D SI + EHY C++DL +RAGRL +A + + I+ A +W+ LLG C
Sbjct: 449 IFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNA 508
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ N + LA L + EP N + +LSNIY G+WK+ A I+ M + G KK PGCS
Sbjct: 509 HGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCS 568
Query: 537 SIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIV 580
IEV V + ++R+ KS +E+++I L QN H + IV
Sbjct: 569 WIEVANKVHV-FVARD---KS--HSESDLIYGLLQNIHHMMRIV 606
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 132/321 (41%), Gaps = 45/321 (14%)
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
Y+S G + +A L D N +++ + +ARKLFD P DV+SW +
Sbjct: 23 AYVSYGSMGAASAAVGLEQSHDP---NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTAL 79
Query: 235 LSGYANNGDVEECKRLFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+S YA G + + + LF+ P+ RNV +W L+ GYA L E F+RM V
Sbjct: 80 VSAYARRGMLRDARELFDR-PDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNVVS 138
Query: 293 PND-----ATIVTVLSACA---RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
N A V ACA R+ D W N L+ + G
Sbjct: 139 WNTMLEAYAAAGRVGDACALFDRMPVRDAGSW-----------------NILLATLVRSG 181
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
++ A ++F M +D++ W T++ G+A G+ A LF M + +++ ++
Sbjct: 182 SVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPE----RNVVSWNAMIS 237
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEA 462
T ++E L F M P+ + C MV + L A + MP E
Sbjct: 238 GYTRNHRIDEALDLFMKM-------PERDIASCNIMVTGFIQNKDLKRARELFDEMP-ER 289
Query: 463 DAVIWANLLGSCRVYKNVELA 483
+ V W ++ K ELA
Sbjct: 290 NVVTWTTMMNGYLKGKQSELA 310
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + + ++ ++ A+ ++ ARK+FD +++++SWN + YA +
Sbjct: 347 QVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHG 406
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVG 138
++L+ +M++ PN T+ ++L +C + EG ++ +V
Sbjct: 407 VGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHY 466
Query: 139 TALIELYSTGKAIEAAYKV--FGEMDERNVVVWTSMINGYISCGDI----VSARCLFELA 192
T LI+L S ++ A ++ + ++ + VW++++ G + G+ ++AR L +
Sbjct: 467 TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAE 526
Query: 193 PE 194
P+
Sbjct: 527 PD 528
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/510 (38%), Positives = 284/510 (55%), Gaps = 27/510 (5%)
Query: 51 TYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
T+ K DK NV SWN++ A+ + F+ ++KL +P +FP +KSC
Sbjct: 1096 TWFYKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ L G H GF ++FV +ALI++YS ++ A +F E+ RNVV WT
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212
Query: 171 SMINGYISCGDIVSARCLFE--LAPERDVILWNTIVSGYIDVRNMIEA------------ 216
SMI GY+ +A LF+ L E +V N + + + +++ A
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272
Query: 217 ------RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+K FD + NT++ YA G K++F+ M E++ SWN +I YA
Sbjct: 1273 VHGFVVKKGFD----GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYA 1328
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+GL E L+ F M+ V N T+ VL ACA GAL K +H + NV
Sbjct: 1329 QSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNV 1388
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
CVG ++IDMY KCG +E A F+ M K++ +W +++G MHGR AL +F++M A
Sbjct: 1389 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ ITF+ +L AC+H GLVEEG +F +M Y I P IEHYGCMVDL RAG L E
Sbjct: 1449 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 1508
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A + +KRM ++ D V+W +LLG+CR++KNV+L E+A ++L EL+P N +V+LSN+Y D
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 1568
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
GRW DV R+++ M++ K PG S +E+
Sbjct: 1569 AGRWADVERMRMLMKNRQLVKPPGFSLVEL 1598
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 210/392 (53%), Gaps = 43/392 (10%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER- 164
+L++C LR+ +H ++++G + + LI LYST I A +F ++
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 165 ----NVVVWTSMINGY----------ISCGDIVSARCLFELAPER--------------- 195
N+++ + ING + C I + + F +
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 196 ---------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
DV + N ++ Y + A K+F++M ++V+SW T++SG + GD++E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+R+F+E+P +NV SW +I GY N E L+ FKRM E +FPN+ T+V+++ AC
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKACT 268
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+G L + +H YA N + V +G ALIDMY+KCG I++A++VF +M K L TWN+
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+ L +HG G AL+LF EM+ PD ITFIG+LCAC H+ V+EG +YF M Y
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
I P EHY CM +L AR+ L EA K +
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
KHL QI +++ SGL +T ++I + ++ YA +F +I + +WN +
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRAN 100
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N ++L+ M + FTFP V+K+C ++ G+ +H ++K GF ++
Sbjct: 101 TINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDV 160
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV LI+ Y A KVF +M RNVV WT++I+G ISCGD+ AR +F+ P +
Sbjct: 161 FVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK 220
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS------------------------- 230
+V+ W +++GYI + EA +LF +M +++
Sbjct: 221 NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH 280
Query: 231 --------------WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
++ Y+ G +++ +FE MP +++ +WN +I +GL
Sbjct: 281 DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQ 340
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
E L+ F M V P+ T + VL AC +
Sbjct: 341 EALNLFSEM-ERVNVKPDAITFIGVLCACVHI 371
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 176/376 (46%), Gaps = 28/376 (7%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFH 81
Q G E +++ +I ++ Q+ AR +FD+I +NVVSW +M GY QNE
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 82 RTVVVLF-------TQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
++LF T+++ + +P + VL +C +++ E +H V+K GF
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 1284
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+I VG L++ Y+ + KVF M+E++ + W SMI Y G A +F
Sbjct: 1285 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 194 ERDVILWNTIVSGYI-----DVRNMIEARKLFDQMPKKD----VISWNTMLSGYANNGDV 244
+ +N + + + + + DQ+ K D V +++ Y G V
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E K+ F+ M E+NV SW ++ GY +G E LD F +M+ G V PN T V+VL+A
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-VKPNYITFVSVLAA 1463
Query: 305 CARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
C+ G ++ F+ H Y G + C ++D++ + G + A ++ M K
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC----MVDLFGRAGCLNEAYNLIKRMKMK 1519
Query: 360 -DLITWNTIISGLAMH 374
D + W +++ +H
Sbjct: 1520 PDFVVWGSLLGACRIH 1535
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 12/223 (5%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
+ +C L++ AR++FD+I +NVVSW AM NGY +N+ + LF +M+ + PN
Sbjct: 201 LISCGDLQE---ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNE 257
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
+T ++K+C ++ L G +H +KN +++GTALI++YS +I+ A +VF
Sbjct: 258 YTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFET 317
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEA 216
M +++ W SMI G A LF + + D I + ++ + ++N+ E
Sbjct: 318 MPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Query: 217 RKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEM 254
F +M + I+ + M YA + +++E + +E+
Sbjct: 378 CAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ +G + LF ++ F+WN +I NGL + L +K M+ +G + + T
Sbjct: 69 YSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG-IAADKFT 127
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
V+ AC ++D K VH G+ G+V V N LID Y KCG A+ VF M
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR 187
Query: 358 TKDLITWNTIISGLAMHG-------------------------------RGAGALSLFHE 386
+++++W T+ISGL G + AL LF
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKR 247
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE---HYG-CMVDLL 442
M+ P+ T + ++ ACT MG++ G DY+I IE + G ++D+
Sbjct: 248 MQAENIFPNEYTMVSLIKACTEMGILTLGRGIH-----DYAIKNCIEIGVYLGTALIDMY 302
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++ G + +A++ + MP ++ W +++ S V+ L + AL +E+E N
Sbjct: 303 SKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVHG---LGQEALNLFSEMERVN 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AH+ L K +H QV+ LE + + II + ++ A+K FD++ ++NV
Sbjct: 1364 AHAGALRAGKCIHD---QVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 1420
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW AM GY + + + +F +M + PN TF VL +C + EG + +
Sbjct: 1421 SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAM 1480
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGYISC 179
K I +++L+ + AY + M + + VVW S+ I+ +
Sbjct: 1481 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 1540
Query: 180 GDIVSARCLFELAPE 194
G+I +A+ LFEL P+
Sbjct: 1541 GEI-AAQKLFELDPD 1554
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 86/225 (38%), Gaps = 36/225 (16%)
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ +H +G + + LI +Y+ G I A+ +F + TWN II ++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACT-----------HMGLVEEGLS------ 417
G AL L+ M G D TF ++ ACT H L++ G S
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 418 ------YFQSMAMDYSI-------VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
YF+ +++ V + + ++ L G L EA +P +
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP-SKNV 222
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKN--PANFVMLSNI 507
V W ++ Y + E ALE ++ +N P + M+S I
Sbjct: 223 VSWTAMING---YIRNQQPEEALELFKRMQAENIFPNEYTMVSLI 264
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 52/99 (52%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + + +E Y+ +I ++ + A ++F+ + +++ +WN+M +
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + LF++M++++ P+ TF VL +CV I ++EG
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 311/555 (56%), Gaps = 24/555 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMF-DKITDQNV 65
A + L K LH + ++T G S +I ++ QM A +F D ++NV
Sbjct: 22 ADHQNLNKGKQLHSL---MITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNV 78
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
++NA+ +G+ N + +M+ MP+ +TFP V+++C ++ E +++H
Sbjct: 79 FAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEV---MEVKKIHGC 135
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+LK G ++FVG+AL+ Y ++E A KVFGE+ R+VV+W +MINGY G + A
Sbjct: 136 LLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEA 195
Query: 186 RCLFE------LAPERDVILWN-TIVSGYIDVRNMIEARKLFDQMPKKDVIS-WNTMLSG 237
+F +AP R I ++ + D+ N + +M +S N ++
Sbjct: 196 LEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDM 255
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y + + +FE + E+++FSWN +I + G L F +ML G + P+ T
Sbjct: 256 YGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSG-ILPDLVT 314
Query: 298 IVTVLSACARLGALDFSKWVHVYA--------EYNGYQGNVCVGNALIDMYAKCGIIENA 349
I TVL AC+ L AL + +H Y + NG N+ V NA++DMYAKCG + NA
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+ +F+SM KD+ +WN +I G MHG AL +F +M A P+ +T +G+L AC H
Sbjct: 375 LKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHA 434
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G V G + M + ++P IEHY C++D+L RAG L +A + V++MPI+A+ V+W
Sbjct: 435 GFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LLG+CR++ N ELAE+A ++ +LEP++ ++V++SN+YG +GR+++V ++ M++
Sbjct: 495 LLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNV 554
Query: 530 KKLPGCSSIEVNEVV 544
KK PGCS IE+ + V
Sbjct: 555 KKTPGCSWIELKDGV 569
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 72/366 (19%)
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
+ + ++ L+ + C F L+SC L +G++LH L++ GF + T+LI +YS
Sbjct: 1 MLSAIQMLNNVTKCVAF---LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYS 57
Query: 147 T-GKAIEAAYKVFGEMDERNVVVWTSMINGYIS--------------------------- 178
G+ EA + ERNV + ++I+G++S
Sbjct: 58 KCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFP 117
Query: 179 -----CGDIVSAR----CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
C +++ + CL ++ E DV + + +V+ Y+ +M +A+K+F ++ +DV+
Sbjct: 118 CVVRTCCEVMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVV 177
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
WN M++GYA G ++E L+ F+RM +G
Sbjct: 178 LWNAMINGYAKIGCLDE-------------------------------ALEVFRRMHVKG 206
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
V P+ TI +LS A G LD K VH GY V V NALIDMY KC I +A
Sbjct: 207 -VAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDA 265
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+ +F ++ KD+ +WN+IIS G G L LF +M +G +PD +T +L AC+H+
Sbjct: 266 LIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHL 325
Query: 410 GLVEEG 415
+ G
Sbjct: 326 AALMHG 331
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 17/253 (6%)
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
ML+ ++ N V L +CA L+ K +H G+ + +LI+MY+KCG
Sbjct: 1 MLSAIQMLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCG 60
Query: 345 IIENAVDVF-NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
+ A+ VF + +++ +N IISG +G + + +M+ G MPD TF ++
Sbjct: 61 QMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVV 120
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
C + V++ M ++ + +V+ + G + +A + I D
Sbjct: 121 RTCCEVMEVKKIHGCLLKMGLELDVFVG----SALVNTYLKNGSMEDAQKVFGELSIR-D 175
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKN--PANFVMLSNIY-----GDLGRWKD 516
V+W ++ Y + + ALE + K P+ F + + GDL K
Sbjct: 176 VVLWNAMING---YAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKT 232
Query: 517 VARIKVAM-RDTG 528
V I + M D+G
Sbjct: 233 VHGIVMKMGYDSG 245
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 302/540 (55%), Gaps = 13/540 (2%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL Q + ++TSGL + I+ + K + Y +FD++ + WN +
Sbjct: 20 TFDHLKQTTSILITSGLAHHTFFLSDILRSAT--KDLGYTLLLFDRLATPYIFLWNTIIR 77
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G++ + + V+V +++++ +P+ TFP++LK+ K+ + + ++K G
Sbjct: 78 GFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAHIVKFGLDF 136
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-RCLFELA 192
+ FV +L+ ++ ++ + ++F E +++VV WT++ING + G V A C E+
Sbjct: 137 DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR 196
Query: 193 P---ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDV 244
E D + +++ +R++ R + + + W+ ++ Y+ G
Sbjct: 197 SSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYC 256
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
++ ++F EMP RN+ SW LI GY + E L F+ M+ EG + PN +T+ + L+A
Sbjct: 257 DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEG-IEPNQSTVTSALTA 315
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA+LG+LD +W+H Y + + N +G AL+DMY+KCG ++ A+ VF + KD+ W
Sbjct: 316 CAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPW 375
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+I+GLAM G +L+LF +M + P+G+TF+G+L AC H GLV+EGL F+ M
Sbjct: 376 TAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMIC 435
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
DY + P ++HYGCMVDLL RAGRL EA+ F++ MP+E +W L C ++K EL E
Sbjct: 436 DYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGE 495
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +L+P + +++L+N+Y +W+ A ++ M+ G K PGCS IEVN V+
Sbjct: 496 HIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVI 555
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 302/542 (55%), Gaps = 13/542 (2%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S ++ K +H V+ G + + +I A + ++ AR +FD+++D++VV
Sbjct: 169 AASAKVRECKRVH---GYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVV 225
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWN+M +G N F R + F QM L + T VL +C + L G LH
Sbjct: 226 SWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYG 285
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K GF + L+++YS + A +VF +M E +V WTS+I ++ G A
Sbjct: 286 VKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAI 345
Query: 187 CLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGY 238
LF+ + D+ ++V ++ + R++ + + K ++ S N +++ Y
Sbjct: 346 GLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMY 405
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G +EE +F ++P +N+ SWN +IGGY+ N L E L F M + ++ P+D T+
Sbjct: 406 AKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM--QKQLKPDDVTM 463
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
VL ACA L AL+ + +H + GY ++ V AL+DMY KCG++ A +F+ +
Sbjct: 464 ACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPK 523
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
KD+I W +I+G MHG G A+S F +M+ AG P+ +F IL ACTH GL++EG
Sbjct: 524 KDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKL 583
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F SM + +I P++EHY CMVDLL R+G L+ A F++ MPI+ DA IW LL CR++
Sbjct: 584 FDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHH 643
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+VELAE E + ELEP+N +V+L+N+Y + +W++V +I+ + G K GCS I
Sbjct: 644 DVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWI 703
Query: 539 EV 540
EV
Sbjct: 704 EV 705
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 228/479 (47%), Gaps = 35/479 (7%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + LE K +H I + ++G+ + + +++ + R++FD I + +
Sbjct: 68 AELKSLEDGKRVHSI---ISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIF 124
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + + YA+ +R V LF +M++L + +TF VLK +RE + +H V
Sbjct: 125 LWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYV 184
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LK GF + V +LI Y +E+A +F E+ +R+VV W SMI+G G +
Sbjct: 185 LKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGL 244
Query: 187 CLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGY 238
F L + D ++ +V N+ R L K V+ NT+L Y
Sbjct: 245 EFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMY 304
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+ G++ +F +M E + SW +I + GL +E + F M ++G + P+ +
Sbjct: 305 SKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG-LRPDIYAV 363
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+V+ ACA +LD + VH + + N N+ V NAL++MYAKCG +E A +F+ +
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL-- 416
K++++WNT+I G + + AL LF +M+ + PD +T +L AC + +E+G
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLK-PDDVTMACVLPACAGLAALEKGREI 482
Query: 417 -------SYFQSMAMDYSIVPQIEHYGC-MVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
YF + H C +VD+ + G L A +P + D ++W
Sbjct: 483 HGHILRKGYFSDL-----------HVACALVDMYVKCGLLVLAQQLFDMIP-KKDMILW 529
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 217/457 (47%), Gaps = 18/457 (3%)
Query: 57 FDKITDQNV-VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+ T NV V NA + + R + L ++ ++ + N T+ VL+ C ++ +
Sbjct: 15 LSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKS 72
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L +G+ +H ++ NG + +G L+ +Y + ++F + + +W +++
Sbjct: 73 LEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSE 132
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
Y G+ + LF EL D + ++ G+ + E +++ + K S+
Sbjct: 133 YAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSY 192
Query: 232 ----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
N++++ Y G+VE + LF+E+ +R+V SWN +I G NG L+ F +ML
Sbjct: 193 NAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLN 252
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
G V + AT+V VL ACA +G L + +H Y G+ G V N L+DMY+KCG +
Sbjct: 253 LG-VDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLN 311
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A +VF M +++W +II+ G A+ LF EM++ G PD ++ AC
Sbjct: 312 GANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA 371
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+++G + + ++ + ++++ A+ G + EA ++P++ + V W
Sbjct: 372 CSNSLDKGREVHNHIKKN-NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK-NIVSW 429
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPK-NPANFVM 503
++G Y L AL+ +++ + P + M
Sbjct: 430 NTMIGG---YSQNSLPNEALQLFLDMQKQLKPDDVTM 463
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 283/527 (53%), Gaps = 49/527 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIIT--ACAQLKQMTYARKMFDKITDQNVVS 67
+QL + K + Q Q + SGL ++ +II+ + + L + YA+ +F+ T N
Sbjct: 14 QQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTTMDNPFV 73
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE------- 120
N M YA++ F + L+ M + D + F +P LK+C ++ EG+
Sbjct: 74 CNTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFMYPFGLKACARVLWCNEGDIKCTQLD 133
Query: 121 ------ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
E+HC + + G + F+ +L+ LYS
Sbjct: 134 IACKGAEIHCRLFRLGLDQDCFIQNSLVYLYS---------------------------- 165
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
CG + AR +F+ E+ + WN ++S Y + + A L MP K+V+SWN +
Sbjct: 166 ---QCGFLDLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNML 222
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++ Y G +E+ K +F+EMPER+ SWN +I GY + L F+ M V
Sbjct: 223 IARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEI-ANVEAT 281
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
D T+++VL ACA GAL+ + +H+ + Y+ + NAL+DMYAKCG + A +VF+
Sbjct: 282 DITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFS 341
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFH--EMKNAGEMPDGITFIGILCACTHMGLV 412
+ K + WN +I LA+HG AL LF EM G P+ +TFIG+L AC+H GLV
Sbjct: 342 ELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLV 401
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EG +F M +Y I+P I+HYGCMVDLL+R G L EA +K MP EA++V+W LLG
Sbjct: 402 DEGRKFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLG 461
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+CRV+ +V+LAE + ++L ++EP ++V+LSNIY + RW DV R
Sbjct: 462 ACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVER 508
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 300/514 (58%), Gaps = 33/514 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A K+FDK+ ++N+V+W M +AQ R + LF M+ +P+ FT+ VL +C +
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA---IEAAYKVFGEMDERNVVVW 169
+ L G++LH V++ G ++ VG +L+++Y+ A ++ + KVF +M E NV+ W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI-----DVRNMIEA-RKLFDQM 223
T++I Y G+ + + L+ ++SG+I ++++A L D
Sbjct: 124 TAIITAYAQSGE----------CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 173
Query: 224 PKKDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V S+ N+++S YA +G +E+ ++ F+ + E+N+ S+N ++ GYA
Sbjct: 174 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 233
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
N E F + G + + T ++LS A +GA+ + +H GY+ N
Sbjct: 234 KNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
C+ NALI MY++CG IE A VFN M+ +++I+W ++I+G A HG AL +FH+M
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 352
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ IT++ +L AC+H+G++ EG +F SM ++ IVP++EHY CMVDLL R+G L E
Sbjct: 353 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 412
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A++F+ MP+ ADA++W LLG+CRV+ N EL A E + E EP +PA +++LSN++
Sbjct: 413 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 472
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+WKDV +I+ +M++ K GCS IEV V
Sbjct: 473 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 506
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 187/370 (50%), Gaps = 15/370 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
Q+ ++V+ GL + ++ CA + +RK+F+++ + NV+SW A+ YA
Sbjct: 72 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYA 131
Query: 77 QN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
Q+ E + + LF +M PN F+F VLK+C ++ GE+++ +K G +
Sbjct: 132 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 191
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
VG +LI +Y+ +E A K F + E+N+V + ++++GY A LF +
Sbjct: 192 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 251
Query: 196 DV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEEC 247
+ + +++SG + M + ++ ++ K S N ++S Y+ G++E
Sbjct: 252 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 311
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++F EM +RNV SW +I G+A +G L+ F +ML G PN+ T V VLSAC+
Sbjct: 312 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAVLSACSH 370
Query: 308 LGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWN 365
+G + + K + + +G + ++D+ + G++ A++ NSM D + W
Sbjct: 371 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 430
Query: 366 TIISGLAMHG 375
T++ +HG
Sbjct: 431 TLLGACRVHG 440
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/460 (40%), Positives = 261/460 (56%), Gaps = 44/460 (9%)
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS- 178
+++ L+NG + +L+++ S I A+K+F + + V ++ +I Y S
Sbjct: 5 KQIQAYTLRNGIEHTKQLIVSLLQIPS----IPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60
Query: 179 -----CGDIVSARCLFELAPER---------------------------------DVILW 200
C + + CL +P DV
Sbjct: 61 GPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFAL 120
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
+V Y + + ARK FD+M +DV +WN+M++GYA GD+E LF MP RNV
Sbjct: 121 TALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVT 180
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SW +I GYA NG + + L F M E + PN+ T+ +VL ACA LGAL+ + + VY
Sbjct: 181 SWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVY 240
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAG 379
A NGY N+ V NAL++MYA+CG I+ A VF +D ++L +WN++I GLA+HGR
Sbjct: 241 ARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDE 300
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A+ LF++M G PD +TF+G+L ACTH G+V EG +F+SM D+SI P++EHYGCMV
Sbjct: 301 AIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMV 360
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAG L EA D + RMP+E D+V+W LLG+C + +VELAE A L ELEP NP
Sbjct: 361 DLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPG 420
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
N+V+LSNIY GRW VAR++ M+ K G S IE
Sbjct: 421 NYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIE 460
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 189/424 (44%), Gaps = 76/424 (17%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L QIQ + +G+E T ++I + Q+ + YA K+FD I V +N + Y+
Sbjct: 4 LKQIQAYTLRNGIEH----TKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSS 59
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ H L+TQM PN +F + +C +++ ++G LH +K+GF ++F
Sbjct: 60 HGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFA 119
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
TAL+++Y+ + A K F EM R+V W SMI GY CGD+ A LF L P R+V
Sbjct: 120 LTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNV 179
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPK-------------------------------- 225
W ++SGY +A +F M +
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 226 --------KDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFF 276
K++ N +L YA G +++ +FEE+ RN+ SWN +I G A +G
Sbjct: 240 YARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCD 299
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL------------DFSKWVHVYAEYN 324
E ++ F +ML EG P+D T V VL AC G + DFS + E+
Sbjct: 300 EAIELFYKMLREGAA-PDDVTFVGVLLACTHGGMVVEGQHFFESMERDFS--IAPKLEHY 356
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG------RG 377
G ++D+ + G + A D+ M + D + W T++ + HG +
Sbjct: 357 G---------CMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKA 407
Query: 378 AGAL 381
AGAL
Sbjct: 408 AGAL 411
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 278/487 (57%), Gaps = 63/487 (12%)
Query: 56 MFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
+F+K D+ NV SWN++ A++ + F+ M+KL PN TFP +KSC
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC---- 86
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+AL++L+S +A + A +FG E ++ V +++++
Sbjct: 87 ------------------------SALLDLHSGRQAHQQAL-IFGF--EPDLFVSSALVD 119
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
Y CG++ RD AR LFD++ ++++SW +M
Sbjct: 120 MYSKCGEL------------RD-------------------ARTLFDEISHRNIVSWTSM 148
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++GY N D R+F+ M ER+V SWN +I YA NG+ E ++ F RM+ +G + N
Sbjct: 149 ITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYN 208
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T+ VL ACA G+ K +H G + NV VG ++IDMY KCG +E A F+
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M K++ +W+ +++G MHG AL +F+EM AG P+ ITF+ +L AC+H GL+EE
Sbjct: 269 RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 328
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G +F++M+ ++ + P +EHYGCMVDLL RAG L EA D +K M + D V+W LLG+C
Sbjct: 329 GWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 388
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++KNV+L E++ +L EL+PKN +V+LSNIY D GRW+DV R+++ M+++G K PG
Sbjct: 389 RMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPG 448
Query: 535 CSSIEVN 541
S +++
Sbjct: 449 FSLVDIK 455
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 32/189 (16%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q + G E +++ ++ ++ ++ AR +FD+I+ +N+VSW +M GY QN+
Sbjct: 97 QAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQND 156
Query: 80 FHRTVVVLFTQMKKLDAMP--------------------------------NCFTFPIVL 107
+ +F M + D + N T VL
Sbjct: 157 DAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 216
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+C + R G+ +H V+K G +N+FVGT++I++Y +E A K F M E+NV
Sbjct: 217 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 276
Query: 168 VWTSMINGY 176
W++M+ GY
Sbjct: 277 SWSAMVAGY 285
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AHS K +H QV+ GLE + ++ II + ++ ARK FD++ ++NV
Sbjct: 220 AHSGSQRLGKCIHD---QVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 276
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW+AM GY + + + +F +M PN TF VL +C L EG +
Sbjct: 277 SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 336
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMING-----YISC 179
+ + +++L ++ A+ + M R + VVW +++ +
Sbjct: 337 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 396
Query: 180 GDIVSARCLFELAPE 194
G+I SAR LFEL P+
Sbjct: 397 GEI-SARKLFELDPK 410
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 300/514 (58%), Gaps = 33/514 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A K+FDK+ ++N+V+W M +AQ R + LF M+ +P+ FT+ VL +C +
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA---IEAAYKVFGEMDERNVVVW 169
+ L G++LH V++ G ++ VG +L+++Y+ A ++ + KVF +M E NV+ W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI-----DVRNMIEA-RKLFDQM 223
T++I Y G+ + + L+ ++SG+I ++++A L D
Sbjct: 129 TAIITAYAQSGE----------CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 178
Query: 224 PKKDVISW-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ V S+ N+++S YA +G +E+ ++ F+ + E+N+ S+N ++ GYA
Sbjct: 179 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 238
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
N E F + G + + T ++LS A +GA+ + +H GY+ N
Sbjct: 239 KNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
C+ NALI MY++CG IE A VFN M+ +++I+W ++I+G A HG AL +FH+M
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 357
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ IT++ +L AC+H+G++ EG +F SM ++ IVP++EHY CMVDLL R+G L E
Sbjct: 358 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 417
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A++F+ MP+ ADA++W LLG+CRV+ N EL A E + E EP +PA +++LSN++
Sbjct: 418 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 477
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G+WKDV +I+ +M++ K GCS IEV V
Sbjct: 478 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 511
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 187/370 (50%), Gaps = 15/370 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
Q+ ++V+ GL + ++ CA + +RK+F+++ + NV+SW A+ YA
Sbjct: 77 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYA 136
Query: 77 QN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
Q+ E + + LF +M PN F+F VLK+C ++ GE+++ +K G +
Sbjct: 137 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 196
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
VG +LI +Y+ +E A K F + E+N+V + ++++GY A LF +
Sbjct: 197 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 256
Query: 196 DV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEEC 247
+ + +++SG + M + ++ ++ K S N ++S Y+ G++E
Sbjct: 257 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 316
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++F EM +RNV SW +I G+A +G L+ F +ML G PN+ T V VLSAC+
Sbjct: 317 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAVLSACSH 375
Query: 308 LGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWN 365
+G + + K + + +G + ++D+ + G++ A++ NSM D + W
Sbjct: 376 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 435
Query: 366 TIISGLAMHG 375
T++ +HG
Sbjct: 436 TLLGACRVHG 445
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 296/539 (54%), Gaps = 9/539 (1%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L + + ++ ++ SG++ + Y+ +++ A+ +T AR++FD I D+N+VSW A
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTA 167
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M + + + MK P+ TF +L + L+ G+++H + K G
Sbjct: 168 MIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG 227
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
VGT+L+ +Y+ I A +F ++ E+NVV WT +I GY G + A L E
Sbjct: 228 LELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLE 287
Query: 191 LAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG 242
+ +V I + +I+ G + +K+ + + +++ N +++ Y G
Sbjct: 288 KMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCG 347
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
++E ++LF ++P R+V +W ++ GYA G E +D F+RM +G + P+ T + L
Sbjct: 348 GLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG-IKPDKMTFTSAL 406
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
++C+ L K +H + GY +V + +AL+ MYAKCG +++A VFN M ++++
Sbjct: 407 TSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVV 466
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
W +I+G A HGR AL F +MK G PD +TF +L ACTH+GLVEEG +F+SM
Sbjct: 467 AWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSM 526
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+DY I P +EHY C VDLL RAG L EA + + MP + +W LL +CR++ +VE
Sbjct: 527 YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVER 586
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
E A E + +L+P + +V LSNIY GR++D +++ M K PG S IEV+
Sbjct: 587 GERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 645
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 197/381 (51%), Gaps = 13/381 (3%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +L+ C ++ +L +G E+H +LK+G + N ++ L+ +Y+ ++ A +VF +
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTIVSGYIDVRNMIEARK 218
+RN+V WT+MI +++ + A +E + D + + ++++ + + + +K
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 219 LFDQMPKKDV---ISWNTMLSG-YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+ ++ K + T L G YA GD+ + + +F+++PE+NV +W LI GYA G
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
L+ ++M + V PN T ++L C AL+ K VH Y +GY + V N
Sbjct: 279 VDVALELLEKM-QQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVN 337
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALI MY KCG ++ A +F + +D++TW +++G A G A+ LF M+ G P
Sbjct: 338 ALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKP 397
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMA-MDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
D +TF L +C+ ++EG S Q + YS+ ++ +V + A+ G + +A
Sbjct: 398 DKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARL 455
Query: 454 FVKRMPIEADAVIWANLLGSC 474
+M E + V W ++ C
Sbjct: 456 VFNQMS-ERNVVAWTAMITGC 475
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 7/226 (3%)
Query: 271 NNGLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
G E L M+ +G RV+ + +L CARL +L+ + VH +G Q N
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSD--VFRGLLQECARLRSLEQGREVHAAILKSGIQPN 130
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ N L+ MYAKCG + +A VF+ + +++++W +I + A + MK
Sbjct: 131 RYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA-MDYSIVPQIEHYGCMVDLLARAGRL 448
AG PD +TF+ +L A T+ L++ G +A + P++ +V + A+ G +
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDI 248
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
++A ++P E + V W L+ V++A LE++ + E
Sbjct: 249 SKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 285/527 (54%), Gaps = 39/527 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +FD + A +G ++ H+ + + + + + P+VLKSC +
Sbjct: 127 ARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQ 186
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
A +G + HC L G ++FV TAL++ Y+ +++A F EM ++ + +
Sbjct: 187 SAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCL 246
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DV 228
I GY GD+ AR LF+ P R WN++++ Y EA LFDQM ++ +
Sbjct: 247 ITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNA 306
Query: 229 ISWNTMLSGYANNGD----------------------------------VEECKRLFEEM 254
I+ T+ S A GD ++E + F+ M
Sbjct: 307 ITITTVFSICAKTGDLDTGRRARAWIREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRM 366
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P R+V +W+ +I GY+ NG E L+ F+RM PN+ T+V VLSACA+LG+ +
Sbjct: 367 PRRDVVAWSTMIAGYSQNGRPHESLELFERMKATN-CKPNEVTLVGVLSACAQLGSDELG 425
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ + Y E +G+ALIDMY KCG + A VFN M+ K ++TWN++I GLA++
Sbjct: 426 EQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALN 485
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G A++L+ +M G P+ +TF+ +L ACTH GLV++G+++F+ M + PQ+EH
Sbjct: 486 GFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEH 545
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
C+VDLL ++GRL EA F+ M +E +AVIW+ LL +CR + +VELA+LA +L LE
Sbjct: 546 CACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALE 605
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
P N + +V+LSNIY D G W DV I+ MR +KL S IE++
Sbjct: 606 PNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 652
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 157/349 (44%), Gaps = 18/349 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ + AR++FD + + SWN+M YA R + LF QM + A PN
Sbjct: 246 LITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPN 305
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V C K L G + + + N+ V TAL+E+Y +AI+ A F
Sbjct: 306 AITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARHEFD 364
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M R+VV W++MI GY G + LFE + + G + + + +L
Sbjct: 365 RMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDEL 424
Query: 220 FDQ---------MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+Q +P + + ++ Y G V + +F M ++ V +WN +I G A
Sbjct: 425 GEQIGNYIESQTLPLTSYLG-SALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLA 483
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ--- 327
NG + + +++M+ +G + PN+ T V +L+AC G +D K + + E Q
Sbjct: 484 LNGFAEDAIALYRKMVGDG-IQPNEVTFVALLTACTHAGLVD--KGIAFFEEMKKKQHVS 540
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
V ++D+ K G + A M+ + + + W+T++S H
Sbjct: 541 PQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHA 589
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + QI + + L + Y+ +I + + AR +F+++ + VV+WN+
Sbjct: 418 QLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNS 477
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EELHCLV 126
M G A N F + L+ +M PN TF +L +C + +G EE+
Sbjct: 478 MIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMK--- 534
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI--- 182
K + +++L + AYK +M+ E N V+W+++++ + D+
Sbjct: 535 KKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELA 594
Query: 183 -VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
++A L L P I + + + Y D + R++ D M K++
Sbjct: 595 KLAAGKLVALEPNNSSI-YVLLSNIYADAGLWGDVREIRDLMRSKNL 640
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 282/514 (54%), Gaps = 46/514 (8%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQ--MKKLDAMPNCFTFPIVLKSCVKINA--LREGEELH 123
W + YA R +++ + ++ P P++LK+ + L G+ LH
Sbjct: 23 WAHLVKEYASQSLLREAALVYARNLPRRTHHQP---LLPVLLKAAAASSPTELGLGKSLH 79
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV----------------- 166
LK+ F ++ VGT ++ +Y A+ A + F EM +RNV
Sbjct: 80 AEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAVAGDMD 139
Query: 167 --------------VVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDV 210
V W ++I G+ GD+ AR FE P R V+ W +V GY+
Sbjct: 140 GALALFGGMRSWTHVTWATLIRGFAEKGDMAEARRWFEATPPGMRTVVTWTVLVQGYVCA 199
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M AR++FD+MP ++ W++M++GY GD EE + +F+ +P RN+ +WN LI GYA
Sbjct: 200 GDMETAREVFDRMPARNAFVWSSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYA 259
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G + L+AF ML E RV P++ T+ ++LSACA+LG+L+ K VH + + N
Sbjct: 260 QIGCSEQALEAFHLMLQE-RVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQEHIRKNH 318
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N LIDMYAKCG + +A +F+SM K+ WNT+IS LA HG+ AL LF +M+ +
Sbjct: 319 FVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTMISALASHGQSDEALHLFFQMERS 378
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ IT + +L ACTH G V+EGL F + Y + +EHYGC+VDLL RAG+L E
Sbjct: 379 GRKPNTITVLAVLGACTHGGFVDEGLQIFNKLDA-YGVGAGVEHYGCLVDLLGRAGKLKE 437
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE----PKNPANFVMLSN 506
A + V M E + VIW +LLG+CRV+++ E++ L E + L N A ++ML+N
Sbjct: 438 AYEIVNNMSEEPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLAN 497
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
I RW+ +++ M G +K PGCSS+E+
Sbjct: 498 IMAASERWEQAEQMRRKMARRGVEKTPGCSSLEL 531
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 50/414 (12%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+K + +L K LH + + S + + I++ + + AR+ FD++
Sbjct: 61 LKAAAASSPTELGLGKSLH---AEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEM 117
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
D+NV+S+NA+ GYA + LF M+ + T+ +++ + + E
Sbjct: 118 PDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHV----TWATLIRGFAEKGDMAEAR 173
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
G R + T L++ Y +E A +VF M RN VW+SM+ GY G
Sbjct: 174 RWF-EATPPGMR-TVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAG 231
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLS 236
D AR +F+ P R+++ WN +++GY + +A + F M K D + ++LS
Sbjct: 232 DAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMASLLS 291
Query: 237 G-----------------------------------YANNGDVEECKRLFEEMPERNVFS 261
YA GD+ + +F+ M +N
Sbjct: 292 ACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNEC 351
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +I A++G E L F +M GR PN T++ VL AC G +D +
Sbjct: 352 WNTMISALASHGQSDEALHLFFQMERSGRK-PNTITVLAVLGACTHGGFVDEGLQIFNKL 410
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMH 374
+ G V L+D+ + G ++ A ++ N+M + + + W +++ +H
Sbjct: 411 DAYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVH 464
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 4/212 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K +H Q + K+ ++ +I A+ + +AR +FD + +N WN M
Sbjct: 299 LEQGKKVHDFINQ---EHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTM 355
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ A + + LF QM++ PN T VL +C + EG ++ + G
Sbjct: 356 ISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIFNKLDAYGV 415
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLFE 190
A + L++L ++ AY++ M +E N V+W S++ D +R + E
Sbjct: 416 GAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVHRDAEMSRLVTE 475
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
++ + YI + N++ A + ++Q
Sbjct: 476 EILRLHSFHASSNDAEYIMLANIMAASERWEQ 507
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 282/514 (54%), Gaps = 46/514 (8%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQ--MKKLDAMPNCFTFPIVLKSCVKINA--LREGEELH 123
W + YA R +++ + ++ P P++LK+ + L G+ LH
Sbjct: 23 WAHLVKEYASQSLVREAALVYARNLPRRTHHQP---LLPVLLKAAAASSPAELGLGKSLH 79
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV----------------- 166
LK+ F ++ VGT ++ +Y A+ A + F EM +RNV
Sbjct: 80 AEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEMPDRNVISYNALLAGYAVAGDMD 139
Query: 167 --------------VVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDV 210
V W ++I G+ GD+ AR FE P R V+ W +V GY+
Sbjct: 140 GALALFGGMRSWTHVTWATLIRGFAEKGDMAEARRWFEATPPGMRTVVTWTVLVQGYVCA 199
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M AR++FD+MP ++ W++M++GY GD EE + +F+ +P RN+ +WN LI GYA
Sbjct: 200 GDMETAREVFDRMPARNAFVWSSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYA 259
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G + L+AF ML E RV P++ T+ ++LSACA+LG+L+ K VH + + N
Sbjct: 260 QIGCSEQALEAFHLMLQE-RVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQEHIRKNH 318
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N LIDMYAKCG + +A +F+SM K+ WNT+IS LA HG+ AL LF +M+ +
Sbjct: 319 FVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTMISALASHGQSDEALHLFFQMERS 378
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ IT + +L ACTH G V+EGL F + Y + +EHYGC+VDLL RAG+L E
Sbjct: 379 GRKPNTITVLAVLGACTHGGFVDEGLQIFNKLDA-YGVEAGVEHYGCLVDLLGRAGKLKE 437
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE----PKNPANFVMLSN 506
A + V M E + VIW +LLG+CRV+++ E++ L E + L N A ++ML+N
Sbjct: 438 AYEIVNNMSEEPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLAN 497
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
I RW+ +++ M G +K PGCSS+E+
Sbjct: 498 IMAASERWEQAEQMRRKMARRGVEKTPGCSSLEL 531
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 50/414 (12%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+K + +L K LH + + S + + I++ + + AR+ FD++
Sbjct: 61 LKAAAASSPAELGLGKSLH---AEALKSAFARDLLVGTTIVSMYCKCGALADARRAFDEM 117
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
D+NV+S+NA+ GYA + LF M+ + T+ +++ + + E
Sbjct: 118 PDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHV----TWATLIRGFAEKGDMAEAR 173
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
G R + T L++ Y +E A +VF M RN VW+SM+ GY G
Sbjct: 174 RWF-EATPPGMR-TVVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKAG 231
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLS 236
D AR +F+ P R+++ WN +++GY + +A + F M K D + ++LS
Sbjct: 232 DAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQERVKPDEFTMASLLS 291
Query: 237 G-----------------------------------YANNGDVEECKRLFEEMPERNVFS 261
YA GD+ + +F+ M +N
Sbjct: 292 ACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNEC 351
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +I A++G E L F +M GR PN T++ VL AC G +D +
Sbjct: 352 WNTMISALASHGQSDEALHLFFQMERSGRK-PNTITVLAVLGACTHGGFVDEGLQIFNKL 410
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMH 374
+ G + V L+D+ + G ++ A ++ N+M + + + W +++ +H
Sbjct: 411 DAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVH 464
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 4/212 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K +H Q + K+ ++ +I A+ + +AR +FD + +N WN M
Sbjct: 299 LEQGKKVHDFINQ---EHIRKNHFVMNGLIDMYAKCGDLAHARYIFDSMRWKNNECWNTM 355
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ A + + LF QM++ PN T VL +C + EG ++ + G
Sbjct: 356 ISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQIFNKLDAYGV 415
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLFE 190
A + L++L ++ AY++ M +E N V+W S++ D +R + E
Sbjct: 416 EAGVEHYGCLVDLLGRAGKLKEAYEIVNNMSEEPNEVIWGSLLGACRVHRDAEMSRLVTE 475
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
++ + YI + N++ A + ++Q
Sbjct: 476 EILRLHSFHASSNDAEYIMLANIMAASERWEQ 507
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 301/552 (54%), Gaps = 14/552 (2%)
Query: 6 GAHSEQLETTKHLHQIQT----QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT 61
GA + TK Q Q + S LE + Y+ ++ A M+ A +FD I
Sbjct: 63 GALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIV 122
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
+N WN M GYA N +VL+ +M + FT+P VLK+C + + G
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRR 182
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H V+ G ++I+VG +L+ +Y+ + A VF M ER++ W +MI+GY D
Sbjct: 183 VHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNAD 242
Query: 182 IVSARCLFELAPERDVILWNTIVSGYI----DVRNMIEARKLFDQMPKKDVISWN----- 232
+A +F+L + + T + G + D++ + E + + + + ++N
Sbjct: 243 SGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTN 302
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+++ Y N + + +RLFE + ++ SWN +I GYA NG FE L F+RM +G
Sbjct: 303 SLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSG- 361
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P+ T + VL AC ++ AL + +H Y G+ N VG AL+DMY+KCG + + V
Sbjct: 362 PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRV 421
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M K L++W+ +++G +HGRG A+S+ MK +PD F IL AC+H GLV
Sbjct: 422 FDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLV 481
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
EG F M +Y++ P + HY CMVDLL RAG L EA ++ M I+ + IWA LL
Sbjct: 482 VEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLT 541
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+ R++KN++LAE++ +++ ++ PK ++++ LSNIY RW DV R++ +R G KK
Sbjct: 542 ASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKS 601
Query: 533 PGCSSIEVNEVV 544
PGCS IE++ +V
Sbjct: 602 PGCSFIELDNMV 613
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 300/531 (56%), Gaps = 13/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I +V+ +GL + +I+ A+ + AR++FD + ++ VSW + YA++
Sbjct: 150 EIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 209
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + + M + P+ T+ VL +C + AL +G+++H ++++ + +++ V T
Sbjct: 210 YGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST 269
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
AL ++Y A + A +VF + R+V+ W +MI G++ G + A F +AP
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKR 249
+R + T++S + +++ + K ++S N +++ Y+ G +++ ++
Sbjct: 330 DRAT--YTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQ 387
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ MP+R+V SW L+G YA+ E FK+ML +G V N T + VL AC+
Sbjct: 388 VFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQG-VKANKITYMCVLKACSNPV 446
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + K +H G ++ V NAL+ MY KCG +E+A+ VF M +D++TWNT+I
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GL +GRG AL + MK+ G P+ TF+ +L AC LVEEG F M+ DY IV
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIV 566
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +HY CMVD+LARAG L EA D + +P++ A +W LL +CR++ NVE+ E A E
Sbjct: 567 PTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEH 626
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+LEP+N +V LS IY G W+DVA+++ M++ G KK PG S IE+
Sbjct: 627 CLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEI 677
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 242/535 (45%), Gaps = 106/535 (19%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ G++ + YIT ++ A + AR++FDK ++++VVSWN M +GYA
Sbjct: 49 QVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRG 108
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LFT M++ P+ FTF +L +C L G E+H V++ G + VG
Sbjct: 109 LAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN 168
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------------------- 180
ALI +Y+ ++ A +VF M R+ V WT++ Y G
Sbjct: 169 ALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRP 228
Query: 181 ------DIVSARC---------------LFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+++SA C + E DV + + Y+ +AR++
Sbjct: 229 SRITYMNVLSA-CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+ + +DVI+WNTM+ G+ ++G +EE
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAH------------------------------- 316
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F RML EG V P+ AT TVLSACAR G L K +H A +G +V GNALI+M
Sbjct: 317 GTFHRMLEEG-VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINM 375
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y+K G +++A VF+ M +D+++W T++ A + + + F +M G + IT+
Sbjct: 376 YSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITY 435
Query: 400 IGILCACT-----------HMGLVEEGL------------SYFQSMAMDYSI-------V 429
+ +L AC+ H +V+ GL YF+ +++ +I +
Sbjct: 436 MCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSM 495
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVE 481
+ + ++ L + GR EA+ + M E +A + N+L +CRV VE
Sbjct: 496 RDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVE 550
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 191/382 (50%), Gaps = 11/382 (2%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ + + +L+SCVK L G+++H +L+ G + N+++ L++LY+ ++ A ++F
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLF 86
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTIVSGYIDVRNMI 214
+ ++VV W MI+GY G A LF L E D + +I+S +
Sbjct: 87 DKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146
Query: 215 EARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
R++ ++ + D N ++S YA G V + +R+F+ M R+ SW L G YA
Sbjct: 147 WGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 206
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G E L + ML E RV P+ T + VLSAC L AL+ K +H + + Y +V
Sbjct: 207 ESGYGEESLKTYHAMLQE-RVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV 265
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V AL MY KCG ++A +VF + +D+I WNT+I G G+ A FH M
Sbjct: 266 RVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEE 325
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD T+ +L AC G + G A D +V + ++++ ++AG + +
Sbjct: 326 GVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKD 384
Query: 451 AVDFVKRMPIEADAVIWANLLG 472
A RMP + D V W LLG
Sbjct: 385 ARQVFDRMP-KRDVVSWTTLLG 405
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V +L +C + L K VH + G + NV + N L+ +YA CG + A +F+
Sbjct: 32 VKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSN 91
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K +++WN +ISG A G A +LF M+ PD TF+ IL AC+ ++ G
Sbjct: 92 KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGRE- 150
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
M+ + ++ + A+ G + +A M D V W L G+
Sbjct: 151 IHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTGA 204
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 294/535 (54%), Gaps = 38/535 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ L + ++++ L + + +++ A A LK + ARK+FD+I ++NV+ N M Y
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N F+ V +F M + P+ +TFP VLK+C + G ++H K G + +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG L+ +Y GK CG + AR + + R
Sbjct: 176 FVGNGLVSMY--GK-----------------------------CGFLSEARLVLDEMSRR 204
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG--DVEECKR 249
DV+ WN++V GY + +A ++ +M D + ++L +N +V K
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M ++++ SWN +IG Y N + E ++ + RM +G P+ +I +VL AC
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGDTS 323
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL K +H Y E N+ + NALIDMYAKCG +E A DVF +M ++D+++W +IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GRG A++LF +++++G +PD I F+ L AC+H GL+EEG S F+ M Y I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P++EH CMVDLL RAG++ EA F++ M +E + +W LLG+CRV+ + ++ LA ++
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +L P+ +V+LSNIY GRW++V I+ M+ G KK PG S++EVN ++
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 286/539 (53%), Gaps = 68/539 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
++L + Q+V SG + +YI +++ + A+K+F+ IT + WN + G+
Sbjct: 41 RNLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGH 100
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+++ + + LF +M N FT+ +L +CV+ REGE++H VL NG+ +N+
Sbjct: 101 TRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNL 160
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+V T LI LY+ G GD R L+
Sbjct: 161 YVRTNLINLYANGG----------------------------DGGDFDLKRALY------ 186
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
LFD+MP +V+ WN++L+GY GD + +++F+EMP
Sbjct: 187 -----------------------LFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMP 223
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERNV +W ++ G+A NG L F +M G V + +V LSACA LG L K
Sbjct: 224 ERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAG-VELDQVALVAALSACAELGDLTLGK 282
Query: 316 WVHVYAEYNGYQGN----VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
W+H Y E + V + NALI MYA CG ++ A +F + ++ ++W++II+G
Sbjct: 283 WIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGF 342
Query: 372 AMHGRGAGALSLFHEMKNAGE---MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
A G G A+ +F M +G+ PD ITFIG L AC+H GL+ +G+ FQSM + +
Sbjct: 343 AKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGV 402
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
+PQIEHYGCMVDLL+RAG L EA+ ++ MP++ + +W LL CR++KN E+ +
Sbjct: 403 IPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAK 462
Query: 489 RLT-ELEPKNPAN--FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ E++P N A F++L+N+Y GRW+D A ++ M D G KK G S IE+N V+
Sbjct: 463 HLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVL 521
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
I +VL +C L + H +G+ + N L+ +Y G + +A VF +
Sbjct: 30 IFSVLKSCVSFRNLAKT---HAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDIT 86
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
WN II G ++ LF M AG +G T+ +L AC L EG
Sbjct: 87 APSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG 144
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 279/481 (58%), Gaps = 9/481 (1%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+NA+ +GYA + +T +++ ++ K +P+ FTFP VLKSC K + EG ++H +++
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K GF NI+V +L+ YS K A +VF EM R+VV WT +I+GY+ G A
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 188 LF-ELAPERDVILWNTIV-----SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
LF + E + + +++ GY+ V I +S N ++ Y
Sbjct: 122 LFLRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVS-NALMDMYVKC 180
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G + K++F+E+ E+++ SW +I G E L+ F+ M + G + P+ + +V
Sbjct: 181 GCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSG-IEPDGIILTSV 239
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LSACARLGALD+ +WVH + + + ++ +G A++DMYAKCG IE ++ +FN M K++
Sbjct: 240 LSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNV 299
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+TWN +++GLAMHG L LF EM G P+ +TF+ IL AC H GLV EG YF
Sbjct: 300 LTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNW 359
Query: 422 M-AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M Y++ P++EHYGCMVDLL RA L EA++ K MP+ D I LL +C+ N
Sbjct: 360 MKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNT 419
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
EL + L+R EL+ + +V+LSNI+ RW DV RI+ M++ G KK PG + IE+
Sbjct: 420 ELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIEL 479
Query: 541 N 541
+
Sbjct: 480 D 480
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 175/350 (50%), Gaps = 20/350 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ G + Y+ ++ + K+ A ++FD++ ++VVSW + +GY +
Sbjct: 55 QVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAG 114
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V LF +M D PN TF VL +C + L G+ +H L K+ F + V
Sbjct: 115 LFDEAVGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSN 171
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPER 195
AL+++Y + A +VF E+ E+++V WTS+I+G + C A LF+ E
Sbjct: 172 ALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEP 231
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDVEECKRL 250
D I+ +++S + + R + + + +K I W+ M+ YA G +E ++
Sbjct: 232 DGIILTSVLSACARLGALDYGRWVHEHIDRK-AIKWDIQIGTAMVDMYAKCGCIEMSMQI 290
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F MP +NV +WN L+ G A +G ++VL+ F+ M+ G + PN+ T + +L+AC G
Sbjct: 291 FNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVG-MRPNEVTFLAILTACCHCGL 349
Query: 311 LDFSKWVHVYAEYNGYQGNVCVG----NALIDMYAKCGIIENAVDVFNSM 356
++ + + G Q N+ ++D+ + +++ A+++ +M
Sbjct: 350 VNEGR--QYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAM 397
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/509 (36%), Positives = 288/509 (56%), Gaps = 4/509 (0%)
Query: 34 DYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFH-RTVVVLFTQM 91
D + R++ A+ + YA K+FD + + N W ++ + + H R + F M
Sbjct: 47 DRLLFRVLHFSAEKSNLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIM 106
Query: 92 KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
+ +P+ FTF VL +C ++ A+ EG+++H ++++GF N V TAL+++Y+ +
Sbjct: 107 HQKGILPSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYV 166
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
A VF M +R+VV WT+MI GY G +V AR LF+ ER+ W T+V+GY +
Sbjct: 167 CDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYG 226
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYA 270
+M A +L+D M K+ ++W M++GY G+V E +R+F+E+P N + L+ YA
Sbjct: 227 DMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYA 286
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
NG E ++ +++M ++ D +V +SACA+L + S + E +
Sbjct: 287 QNGHAREAIEMYEKM-RRAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTH 345
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V NALI M +KCG I+ A FN M +DL T++ +I+ A HG+ A+ LF +M+
Sbjct: 346 IVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQE 405
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G P+ +TF+G+L AC+ GL+EEG +FQ M Y I P EHY CMVDLL RAG+L +
Sbjct: 406 GLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEK 465
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A +K ADA W +LL +CRVY NVEL E+A L E++P + N+V+L+N Y
Sbjct: 466 AYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYAS 525
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+W+ +K M G KK G S I+
Sbjct: 526 NDKWERAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 161/402 (40%), Gaps = 90/402 (22%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++V SG + + ++ A+ + AR +FD + D++VV+W AM GYA+
Sbjct: 136 QVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAG 195
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+LF M GE N F T
Sbjct: 196 RMVDARLLFDNM---------------------------GER------------NSFTWT 216
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP-ERDVI 198
++ Y+ ++AA +++ M+ + V W +MI GY G++ AR +F+ P +
Sbjct: 217 TMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPS 276
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDV------------------------------ 228
+++ Y + EA +++++M + +
Sbjct: 277 TCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDI 336
Query: 229 ---------ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
I N ++ + G+++ R F M R++++++ +I +A +G + +
Sbjct: 337 EEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAI 396
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGN 334
D F +M EG + PN T V VL+AC+ G ++ F VY + C
Sbjct: 397 DLFLKMQQEG-LTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTC--- 452
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
++D+ + G +E A + T D TW ++++ ++G
Sbjct: 453 -MVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYG 493
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 282/511 (55%), Gaps = 40/511 (7%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
++++ + + FD++ D+++VSWN M GY + F+++ PN ++ ++
Sbjct: 181 EEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPS----PNVISWVNLV 236
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+ + E EL + + N+ L+ Y +EAAY +F EM E+N +
Sbjct: 237 NGYCQAGRMGEARELFDRMPER----NVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSI 292
Query: 168 VWTSMINGYISCG------DIVS-------------------------ARCLFELAPERD 196
WT+M++G++ G D++S AR LF+ RD
Sbjct: 293 SWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRD 352
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ WNT++SGY+ + EA LF QMP KD+ISWNTM++G A G + + +F +M
Sbjct: 353 AVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKR 412
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN SWN +I G+ NGLF E L F M + + + T LSA A L L +
Sbjct: 413 RNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKS-ADWCTYACCLSASANLATLQIGRQ 471
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
H G+ + GNALI YAKCG + A VF+ M +D+++WN +I G A +G
Sbjct: 472 FHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGN 531
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
G+ +++F EM+ PD IT + +L AC+H GL++EGL +F SM YS+ P EHY
Sbjct: 532 GSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYT 591
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CMVDLL RAGRL EA + V+ M I+ +A +W LLG+CRV+KN E+A LA E+L ELEP
Sbjct: 592 CMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPC 651
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
+N+V+LSNI + G+W D +++V M+++
Sbjct: 652 KASNYVLLSNICVEAGKWDDADKVRVLMKES 682
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 53/418 (12%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+++A A ++ AR++FD++ +N VSWN M +Q+ LF DAMP
Sbjct: 48 MVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLF------DAMPA 101
Query: 99 -NCFTFPIVLKSCVKINALREGEEL-------HCLVLKN----GFRANIFVGTALIELYS 146
N +++ I++ V+ L EL C N G+ N A+ L
Sbjct: 102 RNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Query: 147 -----------------TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
+ I + + F EM ++++V W M+ GY+ GD+ A F
Sbjct: 162 MPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFF 221
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
P +VI W +V+GY M EAR+LFD+MP+++V++WN +LSGY VE
Sbjct: 222 SRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYN 281
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF EMPE+N SW ++ G+ +G E D +M ++ N ++ +
Sbjct: 282 LFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSD-----NVGAKTALMHGYLKSN 336
Query: 310 ALDFSKWVHVYAEYNG--YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+D ++ + ++G + VC N +I Y +CG+++ A+ +F M KD+I+WNT+
Sbjct: 337 LIDDARQL-----FDGIVVRDAVC-WNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTM 390
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
I+G A G+ A S+F +MK + +++ I+ GL E L +F M D
Sbjct: 391 IAGCAQGGQIRKAASIFRKMKRR----NTVSWNSIISGFVQNGLFVEALQHFMLMRRD 444
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 207/441 (46%), Gaps = 20/441 (4%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS-WNAMFNGYAQNEFHRTVVVLFTQ 90
+++Y +++ + ++T AR++ D++ + + +N M +GYA+N + L +
Sbjct: 102 RNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M P+ ++ VL ++ + + ++ ++E Y
Sbjct: 162 MPA----PDIVSWNSVLGGLIRNEEISRSVQF----FDEMPDKDLVSWNLMLEGYVRAGD 213
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ A F + NV+ W +++NGY G + AR LF+ PER+V+ WN ++SGY+
Sbjct: 214 LDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQF 273
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ A LF +MP+K+ ISW TM+SG+ +G ++E K + +MP NV + L+ GY
Sbjct: 274 SQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYL 333
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+ L + R L +G V + T++S + G LD + + ++ + ++
Sbjct: 334 KSNLIDDA-----RQLFDGIVVRDAVCWNTMISGYVQCGMLDEA--MVLFQQMP--NKDM 384
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N +I A+ G I A +F M ++ ++WN+IISG +G AL F M+
Sbjct: 385 ISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRD 444
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
+ D T+ L A ++ ++ G F S+ + + ++ A+ GR+ E
Sbjct: 445 AKSADWCTYACCLSASANLATLQIG-RQFHSLLVRTGFISDSSPGNALISAYAKCGRMLE 503
Query: 451 AVDFVKRMPIEADAVIWANLL 471
A M ++ D V W L+
Sbjct: 504 ARQVFDEMVVQ-DIVSWNALI 523
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 24/330 (7%)
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
FR+N L L +G+ + AA ++F EM RNVV + +M++ G + AR LF+
Sbjct: 12 FRSN----QELTSLARSGQ-LAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFD 66
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R+ + WNT++ + +AR LFD MP ++ SW M+S Y G++ + L
Sbjct: 67 EMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLAREL 126
Query: 251 FEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+ MP E+ +N +I GYA NG F + + + M P+ + +VL R
Sbjct: 127 LDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPA-----PDIVSWNSVLGGLIR-- 179
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ S+ V + E ++ N +++ Y + G ++ A F+ + + ++I+W +++
Sbjct: 180 NEEISRSVQFFDEMP--DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVN 237
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G GR A LF M + + + +L VE + F M SI
Sbjct: 238 GYCQAGRMGEARELFDRMPER----NVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSI- 292
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ MV R+G+L EA D + +MP
Sbjct: 293 ----SWTTMVSGFVRSGKLQEAKDVLSKMP 318
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I CAQ Q+ A +F K+ +N VSWN++ +G+ QN + F M++ +
Sbjct: 390 MIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSAD 449
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L + + L+ G + H L+++ GF ++ G ALI Y+ + A +VF
Sbjct: 450 WCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFD 509
Query: 160 EMDERNVVVWTSMINGYISCGD 181
EM +++V W ++I+GY S G+
Sbjct: 510 EMVVQDIVSWNALIDGYASNGN 531
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 154/389 (39%), Gaps = 89/389 (22%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ +++ + ++ A+ + K+ NV + A+ +GY ++ LF
Sbjct: 288 EKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDG 347
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+ DA+ C+ ++ V+ L E ++ + ++ +I + G
Sbjct: 348 IVVRDAV--CWN--TMISGYVQCGMLDEA----MVLFQQMPNKDMISWNTMIAGCAQGGQ 399
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILW------ 200
I A +F +M RN V W S+I+G++ G V A F L A D +
Sbjct: 400 IRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSA 459
Query: 201 -----------------------------NTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
N ++S Y M+EAR++FD+M +D++SW
Sbjct: 460 SANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSW 519
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ GYA+NG+ E +F EM AN+ V
Sbjct: 520 NALIDGYASNGNGSEVIAVFREME--------------ANS------------------V 547
Query: 292 FPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
P++ T+V VLSAC+ G +D F+ + +Y+ + C ++D+ + G +
Sbjct: 548 RPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTC----MVDLLGRAGRL 603
Query: 347 ENAVDVFNSMDTK-DLITWNTIISGLAMH 374
A ++ M + + W ++ +H
Sbjct: 604 REAFELVQGMQIQPNAGVWGALLGACRVH 632
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L T + Q + +V +G +I+A A+ +M AR++FD++ Q++VSW
Sbjct: 460 SANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSW 519
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NA+ +GYA N V+ +F +M+ P+ T +VL +C + EG ++K
Sbjct: 520 NALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIK 579
Query: 129 -NGFRANIFVGTALIELYS-TGKAIEAAYKVFGEMDERNVVVWTSMI-------NGYISC 179
+ T +++L G+ EA V G + N VW +++ N I+
Sbjct: 580 LYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIA- 638
Query: 180 GDIVSARCLFELAP 193
++A LFEL P
Sbjct: 639 --WLAAEKLFELEP 650
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 299/531 (56%), Gaps = 12/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ Q+V G S ++ ++ A+ ++ +R +FD+ D+NV SW++M GY QN
Sbjct: 124 KVHCQIVKFGNPDS-FVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNN 182
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +VLF +M++ N T I++ +C K+ AL +G+ LH ++K G ++ T
Sbjct: 183 LAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVT 242
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL++LY+ + A VF E+ ++V WT+MI GY G A LF L E+ +L
Sbjct: 243 ALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLF-LQKEQVAVL 301
Query: 200 WN--TIVSGYIDVRNMI------EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
N TI S + ++ L ++ +D I N+++ YA + + +F
Sbjct: 302 PNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVF 361
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E + +R+V +WN +I ++ NG +E L+ F +M G V P+ T+V+VLSACA L AL
Sbjct: 362 ETISDRDVVAWNSIISAFSQNGSAYEALELFHQM-RMGSVLPDAVTLVSVLSACASLNAL 420
Query: 312 DFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
H YA G NV VG AL+ YAKCG E+A +F+ MD K +TW+ +ISG
Sbjct: 421 QVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISG 480
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ G G G+LS+F +M A P+ F IL AC+H G++ EG F + DY++VP
Sbjct: 481 YGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVP 540
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+HY CMVDLLARAGRL EA+DF+++MP++ D ++ L C ++ +L ELA++R+
Sbjct: 541 STKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRM 600
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL P + +V++ N+Y RW V +++ M+ G K PGCS +E++
Sbjct: 601 LELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 233/487 (47%), Gaps = 24/487 (4%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L ++ +V GL + + ++++ ++ AR +FD I + +SW + Y
Sbjct: 21 LMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFL 80
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N R +V + +M+ + F VLK+C + EG ++HC ++K G + FV
Sbjct: 81 NSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFV 139
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAP 193
T L+++Y+ IE + VF E +RNV W+SMI GY+ LF E
Sbjct: 140 FTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELI 199
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKR 249
E + I +V + + + + L + K + +L YA G V + +
Sbjct: 200 EANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARS 259
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+E+ ++ SW +I GY NG E L F + + V PND TI +V S+C++L
Sbjct: 260 VFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQK-EQVAVLPNDVTIASVFSSCSQLL 318
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ + +H + G + + V N+L+D YAKC + +A VF ++ +D++ WN+IIS
Sbjct: 319 NLNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIIS 377
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ +G AL LFH+M+ +PD +T + +L AC + ++ G S F + A+ ++
Sbjct: 378 AFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVG-SSFHAYAVKRGLL 436
Query: 430 PQIEHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL----------GSCRVYK 478
+ G ++ A+ G AE+ + + V W+ ++ GS ++
Sbjct: 437 SSNVYVGTALLTFYAKCGD-AESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFG 495
Query: 479 NVELAEL 485
++ AEL
Sbjct: 496 DMLKAEL 502
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 294/535 (54%), Gaps = 38/535 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ L + ++++ L + + +++ A A LK + ARK+FD+I ++NV+ N M Y
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N F+ V +F M + P+ +TFP VLK+C + G ++H K G + +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG L+ +Y GK CG + AR + + R
Sbjct: 176 FVGNGLVSMY--GK-----------------------------CGFLSEARLVLDEMSRR 204
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG--DVEECKR 249
DV+ WN++V GY + +A ++ +M D + ++L +N +V K
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M ++++ SWN +IG Y N + E ++ + RM +G P+ +I +VL AC
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGDTS 323
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL K +H Y E N+ + NALIDMYAKCG +E A DVF +M ++D+++W +IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GRG A++LF +++++G +PD I F+ L AC+H GL+EEG S F+ M Y I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P++EH CMVDLL RAG++ EA F++ M +E + +W LLG+CRV+ + ++ LA ++
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +L P+ +V+LSNIY GRW++V I+ M+ G KK PG S++EVN ++
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 298/542 (54%), Gaps = 11/542 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + +I ++ G + + ++ A++ + A +FD+I ++VSWNA+
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE-GEELHCLVLKNG 130
G +E+H + L +M K PN FT LK+C + ALRE G +LH ++K
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGM-ALRELGRQLHSSLIKMD 242
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++ F+G LI++YS +++ A VF M ER+++ W ++I+G+ + A LF
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW--------NTMLSGYANNG 242
L + T +S + ++A + Q+ + S N+++ Y G
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
VE+ R+FEE P ++ + L+ YA +G E L + M G + P+ ++L
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG-IKPDSFVCSSLL 421
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
+ACA L A + K VHV+ G+ ++ GN+L++MYAKCG IE+A F+ + + ++
Sbjct: 422 NACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+W+ +I GLA HG G AL LF +M G P+ IT + +LCAC H GLV E YF SM
Sbjct: 482 SWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSM 541
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ + I P EHY CM+DLL RAG+L A++ V +MP +A+A++W LLG+ R++KN++L
Sbjct: 542 KILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDL 601
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E A E L LEP+ V+L+NIY +G W VAR++ M+D KK PG S +EV +
Sbjct: 602 GEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKD 661
Query: 543 VV 544
V
Sbjct: 662 KV 663
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 220/492 (44%), Gaps = 73/492 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV +G + +++ ++ A+ AR +FD I D++VVSWNA+F+ Y ++
Sbjct: 31 QVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSD 90
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
H V LF M PN F+ ++ C + +G ++H ++K G+ ++ F
Sbjct: 91 MHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSAN 150
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---------------------- 177
AL+++Y+ +E A VF E+ + ++V W ++I G +
Sbjct: 151 ALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCP 210
Query: 178 ------SCGDIVSARCLFELAPE-----------RDVILWNTIVSGYIDVRNMIEARKLF 220
S + L EL + D L ++ Y +M +AR +F
Sbjct: 211 NMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVF 270
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
MP++D+I+WN ++SG++ N + EE L
Sbjct: 271 KLMPERDMIAWNAVISGHSQNEEDEEAASL------------------------------ 300
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F M TEG F N T+ TVL + A L A + +H + +G++ + V N+LID Y
Sbjct: 301 -FPLMHTEGIGF-NQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY 358
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
KCG +E+A VF DL+ + ++++ A G+G AL L+ EM++ G PD
Sbjct: 359 GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCS 418
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC + E+G + + + I +V++ A+ G + +A R+P+
Sbjct: 419 SLLNACASLSAYEQG-KQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Query: 461 EADAVIWANLLG 472
V W+ ++G
Sbjct: 478 RG-IVSWSAMIG 488
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 202/453 (44%), Gaps = 38/453 (8%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N F FP VLK+C L G+++H +V+ GF ++ FV +L+ LY+ A +F
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL---------WNTIVSGYID 209
+ +R+VV W ++ + Y+ A LF D++L +++++
Sbjct: 69 DAIPDRSVVSWNALFSCYVHSDMHGEAVSLF-----HDMVLSGIRPNEFSLSSMINVCTG 123
Query: 210 VRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
+ + ++ RK+ + K D S N ++ YA G +E+ +F+E+ + ++ SWN +
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I G + L+ + M G + PN T+ + L ACA + + + +H
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSG-MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ +G LIDMY+KC +++A VF M +D+I WN +ISG + + A SLF
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 386 EMKNAGEMPDGITFIGILCA-----CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
M G + T +L + +M LS D +V ++D
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVV------NSLID 356
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK--NP 498
+ G + +A + PI D V++ +L+ + Y E AL E++ + P
Sbjct: 357 TYGKCGHVEDATRVFEESPI-VDLVLFTSLVTA---YAQDGQGEEALRLYLEMQDRGIKP 412
Query: 499 ANFVMLS--NIYGDLGRWKDVARIKVAMRDTGF 529
+FV S N L ++ ++ V + GF
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILKFGF 445
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 308/607 (50%), Gaps = 82/607 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ-N 78
Q ++ +GL ++ ++++ A A + D + + NV S++ + +++ +
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+FH + F+QM MP+ P +K+C ++AL+ ++H + +GF ++ FV
Sbjct: 94 QFHHALST-FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152
Query: 139 TALIELYSTGKAIEAAYKVFGEMDER---------------------------------- 164
++L+ +Y I A++VF M E
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212
Query: 165 -NVVVWTSMINGYISCGDIVSARCLF------ELAPERDVI-------------LWNTIV 204
N++ W MI G+ G A +F P+ I + ++
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 205 SGYIDVRNMI--------------------EARKLFDQMPKKDVISWNTMLSGYANNGDV 244
GY+ + ++ E ++FDQM DV S N + G + NG V
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 245 EECKRLFEEMPER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
E RLF ++ ++ NV SW +I + NG E L+ F+ M G V PN TI
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAG-VKPNSVTIPC 391
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+L AC + AL K H ++ G +V VG+ALIDMYAKCG I+ + F+ + TK+
Sbjct: 392 LLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN 451
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
L+ WN +I+G AMHG+ A+ +F M+ +G+ PD I+F +L AC+ GL EEG YF
Sbjct: 452 LVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFN 511
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
SM+ Y I ++EHY CMV LL+RAG+L +A ++RMP+ DA +W LL SCRV+ NV
Sbjct: 512 SMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNV 571
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L E+A E+L ELEP NP N+++LSNIY G W +V R++ M++ G +K PGCS IEV
Sbjct: 572 SLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEV 631
Query: 541 -NEVVML 546
N+V ML
Sbjct: 632 KNKVHML 638
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 291/534 (54%), Gaps = 19/534 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+ G + Y+ +I + MT A ++F++ + + VSWN++ GY +
Sbjct: 234 QVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG 293
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ QM + I S + + +R C + ++ +
Sbjct: 294 NVEEAKHIYHQMPERSI--------IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 345
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNV----VVWTSMING-----YISCGDIVSARCLFE 190
ALI + + E A + F M + V VV S ++ ++ G ++ + L +
Sbjct: 346 ALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL-K 404
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ E + L N ++ Y +++ ARKLFD+ D+ISWN+M+SGY V+ K +
Sbjct: 405 IGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAI 464
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ MPE++V SW+ +I GYA N LF E L F+ M G P++ T+V+V+SACARL A
Sbjct: 465 FDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG-FKPDETTLVSVISACARLAA 523
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ KWVH Y + NG NV +G LIDMY KCG +E A++VF M K + TWN +I G
Sbjct: 524 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 583
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LAM+G +L +F MK P+ ITF+G+L AC HMGLV+EG +F SM D+ I P
Sbjct: 584 LAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP 643
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++HYGCMVDLL RAG+L EA + + RMP+ D W LLG+C+ + + E+ +L
Sbjct: 644 NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL 703
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P + V+LSNIY G+W DV I+ M K+PGCS IE N V+
Sbjct: 704 IELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVI 757
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%), Gaps = 63/346 (18%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
+T+P+++++C + E +++H VLK GF ++++V LI +S + A +VF E
Sbjct: 214 YTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNE 273
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+ V W S++ GYI G++ A+ ++ PER +I N+++ + ++EA KLF
Sbjct: 274 SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLF 333
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D+M +KD+++W+ +++ + N EE R F M + IG
Sbjct: 334 DEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK---------IG------------- 371
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
V ++ V+ LSACA L ++ K +H + G + + + NALI MY
Sbjct: 372 ----------VMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMY 421
Query: 341 AKCG-------------------------------IIENAVDVFNSMDTKDLITWNTIIS 369
+KCG +++NA +F+SM KD+++W+++IS
Sbjct: 422 SKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMIS 481
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
G A + L+LF EM+ +G PD T + ++ AC + +E+G
Sbjct: 482 GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG 527
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
+K ML+ + ++ T ++ AC+ + +K VH + G+ +V V N LI+ ++
Sbjct: 201 YKSMLS-NYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 259
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
C + +A VFN D ++WN+I++G G A ++H+M
Sbjct: 260 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 294/578 (50%), Gaps = 82/578 (14%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITP--RIITACAQLKQMTYARKMFDKITDQ-NV 65
++Q +TK L Q+ TQ+V + S TP +++ LK Y+ +F I N
Sbjct: 31 AKQCSSTKTLQQVHTQMVVN----SSIHTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPND 86
Query: 66 VSWNAMFNGYAQNEFHRTVVV-LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
++N M + + + LF +M L P+ FTFP SC + +L H
Sbjct: 87 YAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHS 146
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
L+ K + L+S S+I Y CG + S
Sbjct: 147 LLFK-------------LALHSDPHTAH------------------SLITAYARCGLVAS 175
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD--------VIS------ 230
AR +F+ P RD + WN++++GY EA ++F +M ++D ++S
Sbjct: 176 ARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACG 235
Query: 231 ---------W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
W + ++S YA G++E +R+F+ M R+V +WN
Sbjct: 236 ELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNA 295
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GYA NG+ E + F M E V N T+ VLSACA +GALD K + YA
Sbjct: 296 VISGYAQNGMADEAILLFHGM-KEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQR 354
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G+Q ++ V ALIDMYAK G ++NA VF M K+ +WN +IS LA HG+ ALSLF
Sbjct: 355 GFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLF 414
Query: 385 HEMKN--AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
M + G P+ ITF+G+L AC H GLV+EG F M+ + +VP+IEHY CMVDLL
Sbjct: 415 QHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLL 474
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
ARAG L EA D +++MP + D V LLG+CR KNV++ E + + E++P N N++
Sbjct: 475 ARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYI 534
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ S IY +L W+D AR+++ MR G K PGCS IEV
Sbjct: 535 ISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEV 572
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/535 (35%), Positives = 292/535 (54%), Gaps = 11/535 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
KHL + + G + ++ ++ + ++ YARK+FD + +++ V WN M NG
Sbjct: 125 KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGL 184
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+N + LF +M + T VL + ++ L+ G + CL LK GF
Sbjct: 185 VKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCD 244
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE 194
+V T LI LYS + A +F ++ +++ + +MI+G+ + G + LF EL
Sbjct: 245 YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFS 304
Query: 195 RDVILWNTIVSGYIDVRNMIEARKL---FDQMPKKDVISWNTMLSG-----YANNGDVEE 246
+ + +TIV G I + + L K I N +S Y +++
Sbjct: 305 GERVSSSTIV-GLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDL 363
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LF+E PE+ V +WN +I GY NG + FK M+ + PN TI T+LSACA
Sbjct: 364 ARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMM-KTEFTPNAVTITTILSACA 422
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+LG+L F KWVH + + N+ V AL+DMYAKCG I A +F+SM K+ +TWNT
Sbjct: 423 QLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNT 482
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I G +HG G AL L++EM + G P +TF+ +L AC+H GLV EG F +M Y
Sbjct: 483 MIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKY 542
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P IEHY CMVD+L R+G+L +A++F+K+MP+E +W LLG+C ++K+ ++A LA
Sbjct: 543 RIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLA 602
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ERL EL+P + +V+LSNIY + A I+ ++ K PGC+ IEVN
Sbjct: 603 SERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVN 657
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 212/471 (45%), Gaps = 17/471 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+ T HL Q Q + +G ++ +AR +F + ++ +N
Sbjct: 21 KASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNV 80
Query: 71 MFNGYAQNEFHRTVVVLFTQMKK-LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ G++ N+ + + L+T +++ + P+ FT+ + +C L LH + +
Sbjct: 81 LVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LLHAHSIID 137
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G+ +N+FVG+AL++LY + A KVF M ER+ V+W +MING + + LF
Sbjct: 138 GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLF 197
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKL---FDQMPKKDVISW-----NTMLSGYANN 241
V + ++ V+ + ++ K+ + K + ++S Y+
Sbjct: 198 REMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKC 257
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG-RVFPNDATIVT 300
GDV + LF + ++ ++N +I G+ NG + F+ +L G RV + +TIV
Sbjct: 258 GDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV--SSSTIVG 315
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
++ + G L + +H + +G N V A +Y K I+ A +F+ K
Sbjct: 316 LIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKT 375
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
++ WN +ISG +G A+SLF EM P+ +T IL AC +G + G +
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFG-KWVH 434
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ ++ P I +VD+ A+ G ++EA M E + V W ++
Sbjct: 435 HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMI 484
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 292/538 (54%), Gaps = 43/538 (7%)
Query: 13 ETTKHLHQIQTQVVTSG-LEKSDYITPRIITACAQLKQMT-YARKMFDKITDQNVVSWNA 70
+ + + Q+ +V G L S + I + ++ T +AR +FD+I + +N
Sbjct: 19 RSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNT 78
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDA-------MPNCFTFPIVLKSCVKINALREGEELH 123
+ G A ++ R V ++ +M + A P+ TFP VL++C + A G ++H
Sbjct: 79 LIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVH 138
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K G ++ FV ALI +++T GD+
Sbjct: 139 AHVVKAGCESDAFVRNALIGMHAT-------------------------------LGDLG 167
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
+A LF+ D + W+ ++SG+ ++ AR+LFD+ P KD++SWN M++ YA GD
Sbjct: 168 AAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGD 227
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ + LF+ P+R+V SWN +I GY G + ++ F++M G P+ T++++LS
Sbjct: 228 MAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEK-PDTVTMLSLLS 286
Query: 304 ACARLGALDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
ACA G LD + +H + ++ +GNALIDMYAKCG + +A++VF M K++
Sbjct: 287 ACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNV 346
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
TWN+II GLA+HG ++++F +M PD ITF+ +L AC+H G+V++G YF
Sbjct: 347 STWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSL 406
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M Y I P I+HYGCMVD+L+R G L EA +F+ M IE + VIW LLG+CR++ +E
Sbjct: 407 MQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIE 466
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
LAE A L + +FV+LSNIY +G W ++ M D+G K G + I+
Sbjct: 467 LAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVID 524
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 298/545 (54%), Gaps = 50/545 (9%)
Query: 42 TACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPN 99
+A + + + A +F+ T N+ +N M G+ NE ++ M + P+
Sbjct: 8 SAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSNE---KAFTIYRSMLQNGTYPD 64
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI-FVGTALIELYSTGKAIEAAYKVF 158
TF +L++ + E +++HC L G + ++ +LI+ Y E A ++F
Sbjct: 65 RQTFLYLLQT---TKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLF 121
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE------------------ 194
EM +RNVV + +MI G+ G+I+ LF L P+
Sbjct: 122 DEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETK 181
Query: 195 ---------------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
++IL+N ++ Y+ + ARK+FD +KD +SWNT+++GYA
Sbjct: 182 LGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYA 241
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G++E LF ++P R++ SWN LI GYA NG + V F RM E V P+ TIV
Sbjct: 242 KVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAEN-VKPDKVTIV 300
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++SA A +GALD +W+H A + G+ALIDMY KCG IE A +FN + K
Sbjct: 301 NLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEK 360
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ TW T+I+G A HG G AL LF M+ A P+ +TF+ +L AC+H GLV+EGL F
Sbjct: 361 DVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKPNDVTFVSVLAACSHSGLVDEGLKIF 419
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM YSI P +EHYGC+VDLL R+GRL +A+ +++MP+E IW +L +CR+++N
Sbjct: 420 SSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRN 479
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ELAE AL L +LEP+ +++LSN+Y GRW I+ M G KK+ GCSS+
Sbjct: 480 MELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVA 539
Query: 540 VNEVV 544
V+ +V
Sbjct: 540 VDGMV 544
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 55/412 (13%)
Query: 12 LETTK---HLHQIQTQVVTSGL-EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
L+TTK + QI + GL K +Y+ +I AR++FD+++D+NVVS
Sbjct: 72 LQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVS 131
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N M G+A+ ++ LF M+ P+ FT +L C ++ + G+ +H +
Sbjct: 132 YNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIE 191
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+ +N+ + AL+++Y ++ A KVF E++ V W ++I GY G++ A
Sbjct: 192 KSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACD 251
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------PKK--------------- 226
LF P RD++ WN+++SGY + + + LF +M P K
Sbjct: 252 LFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGA 311
Query: 227 ------------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ S + ++ Y G +E +F ++PE++V +W +I G
Sbjct: 312 LDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITG 371
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEY 323
+A +G + L+ F M E + PND T V+VL+AC+ G +D FS Y+
Sbjct: 372 FAFHGFGNKALELFSVMQAETK--PNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIE 429
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAMH 374
G + C L+D+ + G + +A+ V M + + W ++S MH
Sbjct: 430 PGVEHYGC----LVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMH 477
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 292/534 (54%), Gaps = 19/534 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+ G + Y+ +I + MT A ++F++ + + VSWN++ GY +
Sbjct: 99 QVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG 158
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ QM + + + S + + +R C + ++ +
Sbjct: 159 NVEEAKHIYHQMPERSIIAS--------NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 210
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNV----VVWTSMING-----YISCGDIVSARCLFE 190
ALI + + E A + F M + V VV S ++ ++ G ++ + L +
Sbjct: 211 ALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL-K 269
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ E + L N ++ Y +++ ARKLFD+ D+ISWN+M+SGY V+ K +
Sbjct: 270 IGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAI 329
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ MPE++V SW+ +I GYA N LF E L F+ M G P++ T+V+V+SACARL A
Sbjct: 330 FDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG-FKPDETTLVSVISACARLAA 388
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ KWVH Y + NG NV +G LIDMY KCG +E A++VF M K + TWN +I G
Sbjct: 389 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 448
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LAM+G +L +F MK P+ ITF+G+L AC HMGLV+EG +F SM D+ I P
Sbjct: 449 LAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP 508
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++HYGCMVDLL RAG+L EA + + RMP+ D W LLG+C+ + + E+ +L
Sbjct: 509 NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL 568
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P + V+LSNIY G+W DV I+ M K+PGCS IE N V+
Sbjct: 569 IELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVI 622
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 198/424 (46%), Gaps = 65/424 (15%)
Query: 25 VVTSGLEKSDYITPRIITACAQLK--QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHR 82
++ +G + Y R+I + Y R++F+ I + N WN M Y Q
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 83 TVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
L+ M + +T+P+++++C + E +++H VLK GF ++++V LI
Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLI 120
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
+S + A +VF E + V W S++ GYI G++ A+ ++ PER +I N+
Sbjct: 121 NCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNS 180
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
++ + ++EA KLFD+M +KD+++W+ +++ + N EE R F M +
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK------ 234
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
IG V ++ V+ LSACA L ++ K +H +
Sbjct: 235 ---IG-----------------------VMVDEVVAVSALSACANLLVVNMGKLIHSLSL 268
Query: 323 YNGYQGNVCVGNALIDMYAKCG-------------------------------IIENAVD 351
G + + + NALI MY+KCG +++NA
Sbjct: 269 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 328
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+SM KD+++W+++ISG A + L+LF EM+ +G PD T + ++ AC +
Sbjct: 329 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 388
Query: 412 VEEG 415
+E+G
Sbjct: 389 LEQG 392
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 293/541 (54%), Gaps = 43/541 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSG-LEKSDYITPRIITACAQLKQMT-YARKMFDKITDQNVVS 67
+ + + + Q+ +V G L S + I + ++ T +AR +FD+I +
Sbjct: 16 RRCRSLRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFM 75
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDA-------MPNCFTFPIVLKSCVKINALREGE 120
+N + G A ++ R V ++ +M + A P+ TFP VL++C + A G
Sbjct: 76 YNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGA 135
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
++H V+K G ++ FV ALI +++T G
Sbjct: 136 QVHAHVVKAGCESDAFVRNALIGMHAT-------------------------------LG 164
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
D+ +A LF+ D + W+ ++SG+ ++ AR+LFD+ P KD++SWN M++ YA
Sbjct: 165 DLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAK 224
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
GD+ + LF+ P+R+V SWN +I GY G + ++ F++M G P+ T+++
Sbjct: 225 LGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEK-PDTVTMLS 283
Query: 301 VLSACARLGALDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+LSACA G LD + +H + ++ +GNALIDMYAKCG + +A++VF M
Sbjct: 284 LLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQD 343
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K++ TWN+II GLA+HG ++++F +M PD ITF+ +L AC+H G+V++G Y
Sbjct: 344 KNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEY 403
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F M Y I P I+HYGCMVD+L+R G L EA +F+ M IE + VIW LLG+CR++
Sbjct: 404 FSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHG 463
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+ELAE A L + +FV+LSNIY +G W ++ M D+G K G + I
Sbjct: 464 EIELAEHANRELLKARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVI 523
Query: 539 E 539
+
Sbjct: 524 D 524
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 291/560 (51%), Gaps = 86/560 (15%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD--QNVVSWNAMFNGYAQNE 79
V+ G ++ +I A+L + +ARK+FD+I D + V WNAM +GY + E
Sbjct: 118 HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWE 177
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF D MP N+ T
Sbjct: 178 SEGQAQWLF------DVMPE---------------------------------RNVITWT 198
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPER 195
A++ Y+ K +EAA + F M ER+VV W +M++GY G LF+ E
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEP 258
Query: 196 DVILWNTIVSG-----------------------------------YIDVRNMIEARKLF 220
D W T++S Y ++ AR++F
Sbjct: 259 DETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIF 318
Query: 221 DQM-PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
D++ ++ ++WN M+S Y G+++ + LF MP RNV +WN +I GYA NG +
Sbjct: 319 DELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 378
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ FK M+T ++ P++ T+V+V+SAC LGAL+ WV + N + ++ NA+I M
Sbjct: 379 ELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFM 438
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y++CG +E+A VF M T+D++++NT+ISG A HG G A++L MK G PD +TF
Sbjct: 439 YSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTF 498
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
IG+L AC+H GL+EEG F+S+ P I+HY CMVDLL R G L +A ++RMP
Sbjct: 499 IGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMP 553
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+E A ++ +LL + R++K VEL ELA +L ELEP N NF++LSNIY GRWKDV R
Sbjct: 554 MEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVER 613
Query: 520 IKVAMRDTGFKKLPGCSSIE 539
I+ AM+ G KK G S +E
Sbjct: 614 IREAMKKGGVKKTTGWSWVE 633
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 278/557 (49%), Gaps = 57/557 (10%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT-YARKMFDKITDQN 64
G+ + ++ HL Q+ Q++ + L +Y +I C +L+ Y +F+ + N
Sbjct: 5 GSIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPN 64
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V + +M Y+ + H VV++F M+ P+ F +PI++KS A G H
Sbjct: 65 VFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKS-----AGNGGIGFHA 119
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD--ERNVVVWTSMINGYISCGDI 182
VLK G ++ FV A+I++Y+ I A KVF E+ ER V W +M++GY
Sbjct: 120 HVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESE 179
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
A+ LF++ PER+VI W +V+GY V+++ AR+ FD MP++ V+SWN MLSGYA NG
Sbjct: 180 GQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNG 239
Query: 243 DVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
EE RLF+EM E + +W +I ++ G + + R L + ++ N
Sbjct: 240 LAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPC-LAASLVRTLHQKQIQLNCFVR 298
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+L A+ G++ ++ ++ E Y+ +V NA+I Y + G +++A ++FN+M
Sbjct: 299 TALLDMYAKCGSIGAAR--RIFDELGAYRNSV-TWNAMISAYTRVGNLDSARELFNTMPG 355
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEG-- 415
++++TWN++I+G A +G+ A A+ LF EM A ++ PD +T + ++ AC H+G +E G
Sbjct: 356 RNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNW 415
Query: 416 -------------LSYFQSMAMDYSIVPQIE---------------HYGCMVDLLARAGR 447
+S +M YS +E Y ++ A G
Sbjct: 416 VVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGH 475
Query: 448 LAEAVDFVKRMP---IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA--NFV 502
EA++ + M IE D V + +L +C +E E + K+PA ++
Sbjct: 476 GVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI-----KDPAIDHYA 530
Query: 503 MLSNIYGDLGRWKDVAR 519
+ ++ G +G +D R
Sbjct: 531 CMVDLLGRVGELEDAKR 547
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 308/607 (50%), Gaps = 82/607 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ-N 78
Q ++ +GL ++ ++++ A A + D + + NV S++ + +++ +
Sbjct: 34 QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+FH + F+QM MP+ P +K+C ++AL+ ++H + +GF ++ FV
Sbjct: 94 QFHHALST-FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQ 152
Query: 139 TALIELYSTGKAIEAAYKVFGEMDER---------------------------------- 164
++L+ +Y I A++VF M E
Sbjct: 153 SSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212
Query: 165 -NVVVWTSMINGYISCGDIVSARCLF------ELAPERDVI-------------LWNTIV 204
N++ W MI G+ G A +F P+ I + ++
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272
Query: 205 SGYIDVRNMI--------------------EARKLFDQMPKKDVISWNTMLSGYANNGDV 244
GY+ + ++ E ++FDQM DV S N + G + NG V
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332
Query: 245 EECKRLFEEMPER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
E RLF ++ ++ NV SW +I + NG E L+ F+ M G V PN TI
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAG-VKPNSVTIPC 391
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+L AC + AL K H ++ G +V VG+ALIDMYAKCG I+ + F+ + TK+
Sbjct: 392 LLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN 451
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
L+ WN +I+G AMHG+ A+ +F M+ +G+ PD I+F +L AC+ GL EEG YF
Sbjct: 452 LVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFN 511
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
SM+ Y I ++EHY CMV LL+RAG+L +A ++RMP+ DA +W LL SCRV+ NV
Sbjct: 512 SMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNV 571
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L E+A E+L ELEP NP N+++LSNIY G W +V R++ M++ G +K PGCS IEV
Sbjct: 572 SLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEV 631
Query: 541 -NEVVML 546
N+V ML
Sbjct: 632 KNKVHML 638
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 298/516 (57%), Gaps = 13/516 (2%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
++ ARK+FD + ++NVVSW A+ GY N LF +M + N ++ ++L
Sbjct: 94 EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLI 149
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
++ + + +L+ ++ + NI + + L G+ ++ A ++F EM ER+V+
Sbjct: 150 GFLQDGRIDDACKLYEMIPD---KDNIARTSMIHGLCKEGR-VDEAREIFDEMSERSVIT 205
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
WT+M+ GY + AR +F++ PE+ + W +++ GY+ + +A +LF+ MP K V
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
I+ N M+SG G++ + +R+F+ M ERN SW +I + NG E LD F M +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G V P T++++LS CA L +L K VH + +V V + L+ MY KCG +
Sbjct: 326 G-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACT 407
+ +F+ +KD+I WN+IISG A HG G AL +F EM +G P+ +TF+ L AC+
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ G+VEEGL ++SM + + P HY CMVD+L RAGR EA++ + M +E DA +W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
+LLG+CR + +++AE ++L E+EP+N +++LSN+Y GRW DVA ++ M+
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 528 GFKKLPGCSSIEVNEVV---MLGCLSRELDRKSIVR 560
+K PGCS EV V G ++ +++SI++
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILK 600
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 37/367 (10%)
Query: 154 AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
A K+F EM +RN++ W +++GY+ G+I AR +F+L PER+V+ W +V GY+ +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
A LF +MP+K+ +SW ML G+ +G +++ +L+E +P+++ + +I G G
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN--------- 324
E + F M R T+VT R+ D K V E
Sbjct: 187 RVDEAREIFDEM--SERSVITWTTMVTGYGQNNRVD--DARKIFDVMPEKTEVSWTSMLM 242
Query: 325 GYQGN-----------------VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
GY N V NA+I + G I A VF+SM ++ +W T+
Sbjct: 243 GYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDY 426
I +G AL LF M+ G P T I IL C + + G + Q + +
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ + ++ + + G L ++ R P D ++W +++ Y + L E A
Sbjct: 363 DV--DVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISG---YASHGLGEEA 416
Query: 487 LERLTEL 493
L+ E+
Sbjct: 417 LKVFCEM 423
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 18/285 (6%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G I AR LF+ + + WN++V+GY +ARKLFD+MP +++ISWN ++SGY
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
NG+++E +++F+ MPERNV SW L+ GY +NG F +M + +V +
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV-----SWT 145
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+L + G +D + ++ E + N+ ++I K G ++ A ++F+ M +
Sbjct: 146 VMLIGFLQDGRIDDACKLY---EMIPDKDNI-ARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+ITW T+++G + R A +F M E +++ +L G +E+ F
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNGRIEDAEELF 257
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
+ M + I M+ L + G +A+A M DA
Sbjct: 258 EVMPVKPVIA-----CNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 49/289 (16%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ Q ++ AR++FD + ++N SW + + +N F + LF M+K P
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T +L C + +L G+++H +++ F +++V + L+ +Y + + +F
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+++++W S+I+GY S G L E EA K+
Sbjct: 391 RFPSKDIIMWNSIISGYASHG-------LGE------------------------EALKV 419
Query: 220 FDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA---- 270
F +MP K + +++ LS + G VEE +++E M +VF + YA
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM--ESVFGVKPITAHYACMVD 477
Query: 271 ---NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
G F E ++ M E P+ A ++L AC LD +++
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVE----PDAAVWGSLLGACRTHSQLDVAEF 522
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 31/293 (10%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ + G + E ++LF+ +++ SWN ++ GY N + + F M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 292 FPNDATIVT---VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
D I++ ++S + G +D ++ V + NV AL+ Y G ++
Sbjct: 75 --PDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDV 128
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A +F M K+ ++W ++ G GR A L+ + + D I ++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCK 184
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G V+E F M+ + S++ + MV + R+ +A MP E V W
Sbjct: 185 EGRVDEAREIFDEMS-ERSVIT----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWT 238
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
++L +E A E L E+ P P + + + LG+ ++A+ +
Sbjct: 239 SMLMGYVQNGRIEDA----EELFEVMPVKPV--IACNAMISGLGQKGEIAKAR 285
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ Q+V + Y+ ++T + ++ ++ +FD+ ++++ WN++
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 72 FNGYAQNEFHRTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+GYA + + +F +M PN TF L +C + EG +++
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 292/530 (55%), Gaps = 10/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V G + + +I + ++ A K+FD++ D++VVSWN+M +G N
Sbjct: 574 RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + + F QM L + T + +C + +L G LH +K F +
Sbjct: 634 FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-RCLFELAPE---R 195
L+++YS + A + F +M ++ VV WTS+I Y+ G A R +E+ +
Sbjct: 694 TLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSP 753
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSGYANNGDVEECKRLF 251
DV +++ ++ + R + + + K ++ N ++ YA G +EE +F
Sbjct: 754 DVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVF 813
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
++P +++ SWN +IGGY+ N L E L F M E R P+ T+ +L AC L AL
Sbjct: 814 SQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR--PDGITMACLLPACGSLAAL 871
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ + +H NGY + V NALIDMY KCG + +A +F+ + KDLITW +ISG
Sbjct: 872 EIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGC 931
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
MHG G A++ F +M+ AG PD ITF IL AC+H GL+ EG +F SM + ++ P+
Sbjct: 932 GMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPK 991
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY CMVDLLAR G L++A + ++ MPI+ DA IW LL CR++ +VELAE E +
Sbjct: 992 LEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF 1051
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ELEP N +V+L+NIY + +W++V +++ + G KK PGCS IEV
Sbjct: 1052 ELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQ 1101
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 249/503 (49%), Gaps = 24/503 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKI-TD 62
A + L+ K +H + + ++G+ + +++ +C L++ R++FD I +D
Sbjct: 462 AEHKCLQEGKMVHSV---ISSNGIPIEGVLGAKLVFMYVSCGALRE---GRRIFDHILSD 515
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
V WN M + YA+ +R + LF +M+KL N +TF +LK + + E + +
Sbjct: 516 NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H V K GF + V +LI Y +++A+K+F E+ +R+VV W SMI+G + G
Sbjct: 576 HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFS 635
Query: 183 VSARCLFE----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTM 234
SA F L D+ V+ +V ++ R L Q K ++V+ NT+
Sbjct: 636 HSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTL 695
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
L Y+ G++ + + FE+M ++ V SW LI Y GL+ + + F M ++G V P+
Sbjct: 696 LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKG-VSPD 754
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
++ +VL ACA +LD + VH Y N + V NAL+DMYAKCG +E A VF+
Sbjct: 755 VYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFS 814
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ KD+++WNT+I G + + AL LF EM+ PDGIT +L AC + +E
Sbjct: 815 QIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR-PDGITMACLLPACGSLAALEI 873
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G + ++ ++D+ + G L A +P E D + W ++ C
Sbjct: 874 GRG-IHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGC 931
Query: 475 RVY--KNVELAELALERLTELEP 495
++ N +A R+ ++P
Sbjct: 932 GMHGLGNEAIATFQKMRIAGIKP 954
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 212/433 (48%), Gaps = 17/433 (3%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
R V L +K + N ++ +L+ C + L+EG+ +H ++ NG +G L
Sbjct: 435 RNAVELLRMSQKSELDLNAYSS--ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKL 492
Query: 142 IELYSTGKAIEAAYKVFGE-MDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERD 196
+ +Y + A+ ++F + + V +W M++ Y GD + LF +L +
Sbjct: 493 VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT----MLSGYANNGDVEECKRLFE 252
++ I+ + + + E +++ + K S+NT +++ Y +G+V+ +LF+
Sbjct: 553 SYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFD 612
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
E+ +R+V SWN +I G NG L+ F +ML RV + AT+V ++ACA +G+L
Sbjct: 613 ELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLIL-RVGVDLATLVNSVAACANVGSLS 671
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ +H + V N L+DMY+KCG + +A+ F M K +++W ++I+
Sbjct: 672 LGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYV 731
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
G A+ LF+EM++ G PD + +L AC +++G + + ++ +
Sbjct: 732 REGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKN-NMALCL 790
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
++D+ A+ G + EA ++P++ D V W ++G Y L AL+ E
Sbjct: 791 PVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGG---YSKNSLPNEALKLFAE 846
Query: 493 LEPKNPANFVMLS 505
++ ++ + + ++
Sbjct: 847 MQKESRPDGITMA 859
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 290/542 (53%), Gaps = 71/542 (13%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H L+T K H ++ +GL + + + I AC+ + YA +F N
Sbjct: 24 HGTNLKTLKQSHCF---MIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYL 80
Query: 68 WNAMFNGYA---QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
N M + + H + ++ + A P+ FTFP VLK V+++ + G ++H
Sbjct: 81 HNTMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHG 140
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+ GF +++ V T LI++ Y SCG
Sbjct: 141 QAVVFGFDSSVHVVTGLIQM-------------------------------YSSCG---- 165
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+ +ARK+FD+M +DV WN +L+GY G++
Sbjct: 166 ---------------------------GLGDARKVFDEMRVRDVNVWNALLAGYGKVGEM 198
Query: 245 EECKRLFEEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+E + L E MP RN SW +I GYA +G E ++ F+RML E V P++ T++ VL
Sbjct: 199 DEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMEN-VDPDEVTLLAVL 257
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SACA LG+L+ + + Y ++ G V + NA+IDMYAK G I A++VF S++ ++++
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVV 317
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TW TII+GLA HG GA AL +F M AG P+ +TFI IL AC+H+G V+ G +F SM
Sbjct: 318 TWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSM 377
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y I P IEHYGCM+DLL RAG+L EA + +K MP E++A IW +LL + V+ ++++
Sbjct: 378 RSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDV 437
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E AL +L +LEP N N+++L+N+Y +LGRW + ++ M+ G KKL G SSIEV
Sbjct: 438 GERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVEN 497
Query: 543 VV 544
V
Sbjct: 498 RV 499
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 291/535 (54%), Gaps = 10/535 (1%)
Query: 20 QIQTQVVTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + GL + D + + ++ A + ++ A + FD++ ++V +WNAM +G +N
Sbjct: 89 QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
V LF +M + T VL CV + +H +K+G +FV
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPE 194
A+I++Y +E KVF M R++V W S+I+G+ G + SA +F +
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKR 249
DV+ ++ S ++ R + M ++ D+I+ N ++ YA +E +R
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ MP R+ SWN LI GY NGL E + + M + P T V+VL A + LG
Sbjct: 329 MFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLG 388
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL +H + G +V VG +ID+YAKCG ++ A+ +F + WN +IS
Sbjct: 389 ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVIS 448
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G+ +HG GA ALSLF +M+ G PD +TF+ +L AC+H GLV++G ++F M Y I
Sbjct: 449 GVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIK 508
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P +HY CMVD+ RAG+L +A DF++ MPI+ D+ IW LLG+CR++ NVE+ ++A +
Sbjct: 509 PIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQN 568
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L EL+PKN +V++SN+Y +G+W V ++ +R +K PG SSIEV V
Sbjct: 569 LFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSV 623
>gi|255548718|ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545359|gb|EEF46864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 271/483 (56%), Gaps = 2/483 (0%)
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ V WN + ++ + ++++L + +TFPI+LK+ +I A + G
Sbjct: 10 LPSSEVKKWNEIIRKQMHMGNGAQAILTYLKVQELGFHADNYTFPILLKAAGRICASKIG 69
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
LH +K GF A+ FV TAL+ +Y I A+KVF M ++++ W SM++ Y S
Sbjct: 70 FALHGQTIKTGFCAHAFVQTALVNMYGNLHCIGDAFKVFEIMPVKDLIAWNSMLDAYASN 129
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
+ A LF P +D+ +N ++SGY + AR +FD M +D +SWN+M+S Y
Sbjct: 130 AQMDYASNLFNSMPLKDISSFNIMISGYSTRGEAMLARSIFDSMEVRDFVSWNSMISAYI 189
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
GD+E+ LF EMP +N +WN +I G + F VLD F+ M T + P+ T+
Sbjct: 190 RAGDMEKGLALFREMPVKNTVTWNTMITGCLQSEHFGMVLDLFEEMKTANYI-PDYLTVT 248
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+VLS C LG+L +H+YA NG + V ALIDMY+KCG IE + VF K
Sbjct: 249 SVLSTCGHLGSLGTGIKIHIYAIDNGLVSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVK 308
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ WN +IS LA+HG G AL +F +M+ PD ITFIGI+ AC+H GLV+EG F
Sbjct: 309 DIYCWNALISALALHGHGYAALKVFGKMRKNHIQPDDITFIGIINACSHSGLVQEGCQLF 368
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM D+ I P++EHYGCMV+LL R+G LA A+ ++ MP E I LL +C +Y++
Sbjct: 369 VSMQEDFGISPKLEHYGCMVNLLGRSGHLALALQVIETMPFEPGESILGALLSACIIYQD 428
Query: 480 VELAELALERL-TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+E E +E + ++ + +M SN+Y G W++ R + M TG K G S I
Sbjct: 429 LETGERVIELVCSKAHYLSDGELMMFSNLYASCGNWEEANRWREMMNSTGIVKTAGYSVI 488
Query: 539 EVN 541
EV+
Sbjct: 489 EVS 491
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 79/328 (24%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q + +G ++ ++ L + A K+F+ + +++++WN+M + YA N
Sbjct: 72 LHGQTIKTGFCAHAFVQTALVNMYGNLHCIGDAFKVFEIMPVKDLIAWNSMLDAYASN-- 129
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++D N F + LK N + G
Sbjct: 130 -----------AQMDYASNLFN-SMPLKDISSFNIMISG--------------------- 156
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
YST A +F M+ R+ V W SMI+ YI GD+ LF P ++ + W
Sbjct: 157 ----YSTRGEAMLARSIFDSMEVRDFVSWNSMISAYIRAGDMEKGLALFREMPVKNTVTW 212
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSG------------------- 237
NT+++G + + LF++M D ++ ++LS
Sbjct: 213 NTMITGCLQSEHFGMVLDLFEEMKTANYIPDYLTVTSVLSTCGHLGSLGTGIKIHIYAID 272
Query: 238 ----------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
Y+ G +E+ +F + ++++ WN LI A +G + L
Sbjct: 273 NGLVSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVKDIYCWNALISALALHGHGYAALKV 332
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLG 309
F +M + + P+D T + +++AC+ G
Sbjct: 333 FGKM-RKNHIQPDDITFIGIINACSHSG 359
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 45/286 (15%)
Query: 30 LEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+E D+++ +I+A + M +F ++ +N V+WN M G Q+E V+ LF
Sbjct: 173 MEVRDFVSWNSMISAYIRAGDMEKGLALFREMPVKNTVTWNTMITGCLQSEHFGMVLDLF 232
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+MK + +P+ T VL +C + +L G ++H + NG ++ V TALI++YS
Sbjct: 233 EEMKTANYIPDYLTVTSVLSTCGHLGSLGTGIKIHIYAIDNGLVSSPHVTTALIDMYSKC 292
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI 208
+IE VF C V +D+ WN ++S
Sbjct: 293 GSIEQGLHVF--------------------CKSQV-----------KDIYCWNALISALA 321
Query: 209 DVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS--- 261
+ A K+F +M K D I++ +++ +++G V+E +LF M E S
Sbjct: 322 LHGHGYAALKVFGKMRKNHIQPDDITFIGIINACSHSGLVQEGCQLFVSMQEDFGISPKL 381
Query: 262 --WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ ++ +G L + M E P ++ + +LSAC
Sbjct: 382 EHYGCMVNLLGRSGHLALALQVIETMPFE----PGESILGALLSAC 423
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 12 LETTKHLHQIQTQV------VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
L T HL + T + + +GL S ++T +I ++ + +F K +++
Sbjct: 251 LSTCGHLGSLGTGIKIHIYAIDNGLVSSPHVTTALIDMYSKCGSIEQGLHVFCKSQVKDI 310
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
WNA+ + A + + +F +M+K P+ TF ++ +C ++EG +L
Sbjct: 311 YCWNALISALALHGHGYAALKVFGKMRKNHIQPDDITFIGIINACSHSGLVQEGCQL 367
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 236/349 (67%), Gaps = 1/349 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
++ L N I++ Y M +A LF++MP++D ++WN +++ A GD++ F MP
Sbjct: 44 NLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMP 103
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+NV SW +I G+ G E +D F ++ E V PN+ T+V+VL+ACA LG LD +
Sbjct: 104 NKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEA-VRPNEVTVVSVLAACADLGDLDLGR 162
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
VH Y+ +G++ NV V N LIDMY KCG +ENA VF M+ + +++W+ +I+GLAMHG
Sbjct: 163 IVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHG 222
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
+ AL LF EM G P+G+TFIG+L AC+HMGL++EG +F SM DY ++PQIEHY
Sbjct: 223 QAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHY 282
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GC+VDL +RAG L EA +F+ MPI+ + V+W LLG C+V+KN++LAE A++ L+EL+P
Sbjct: 283 GCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDP 342
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N +V++SNIY + RW+D AR++ M+D G KK G SSI VN VV
Sbjct: 343 LNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVV 391
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 153/326 (46%), Gaps = 44/326 (13%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M+ D +P+ FT VLK+C+K++ + G+ +H L K GF +N+F+ ++ LY
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ A +F +M +R+ V W +I GDI A F P ++V W +++SG++
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 211 RNMIEARKLFDQMP---------------------------------------KKDVISW 231
EA LF ++ K++V
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
NT++ Y G +E +R+F EM ER V SW+ +I G A +G E L F M+ G V
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG-V 239
Query: 292 FPNDATIVTVLSACARLGALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
PN T + +L AC+ +G +D + + + A+Y G + ++D++++ G++E A
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADY-GVIPQIEHYGCVVDLFSRAGLLEEA 298
Query: 350 VDVFNSMDTK-DLITWNTIISGLAMH 374
+ SM K + + W ++ G +H
Sbjct: 299 HEFILSMPIKPNGVVWGALLGGCKVH 324
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 30 LEKSDYITPRIITA-CAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+ + D +T I+ A A+ + A F ++ ++NV SW +M +G+ Q + LF
Sbjct: 71 MPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLF 130
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+++ PN T VL +C + L G +H K+GF+ N+ V LI++Y
Sbjct: 131 MKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKC 190
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIV 204
+E A +VF EM+ER VV W++MI G G A CLF +L + + + + ++
Sbjct: 191 GCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLL 250
Query: 205 SGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRLFEEMP-ERN 258
+ + E R+ F M + + ++ ++ G +EE MP + N
Sbjct: 251 HACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPN 310
Query: 259 VFSWNGLIGG 268
W L+GG
Sbjct: 311 GVVWGALLGG 320
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 34/254 (13%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
V P+ T VL AC +L + K +H + G+ N+ + N ++++Y CG + +A+
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAG------------------------------- 379
+F M +D +TWN +I+ LA G G
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A+ LF ++++ P+ +T + +L AC +G ++ G + + ++
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHVCNTLI 184
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK-NP 498
D+ + G L A M E V W+ ++ ++ E A + +L K N
Sbjct: 185 DMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 499 ANFVMLSNIYGDLG 512
F+ L + +G
Sbjct: 244 VTFIGLLHACSHMG 257
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ + +H+ T+ SG +++ ++ +I + + AR++F ++ ++ VVSW+AM
Sbjct: 158 LDLGRIVHEYSTK---SGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAM 214
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNG 130
G A + + LF++M KL PN TF +L +C + + EG + G
Sbjct: 215 IAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYG 274
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
I +++L+S +E A++ M + N VVW +++ G
Sbjct: 275 VIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/430 (39%), Positives = 244/430 (56%), Gaps = 27/430 (6%)
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
+I Y + A +F +M ER++ W M+ GY+ D+ +AR LFE PERD++ W
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE------- 253
N ++SGY + EAR++F +MP K+ ISWN +L+ Y NG +E+ KRLFE
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 254 -------------------MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
MP+R+ SW+ +I GY+ NG E L F M + N
Sbjct: 121 SWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERL-N 179
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
++ LS C+ + AL+ + +H GYQ VGNAL+ MY KCG I+ A D F
Sbjct: 180 RSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQ 239
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ KD+++WNT+I G A HG G AL++F MK G PD T + +L AC+H GLV++
Sbjct: 240 EILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQ 299
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G YF SM DY I ++ HY CMVDLL RAG+L EA + +K MP E DA W LLG+
Sbjct: 300 GSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGAS 359
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++ N EL E A + + E+EP N +++LS +Y GRW D ++++ MR+ G KK+PG
Sbjct: 360 RIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPG 419
Query: 535 CSSIEVNEVV 544
S +EV +
Sbjct: 420 YSWLEVQNKI 429
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 172/399 (43%), Gaps = 93/399 (23%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T + + + AR +F+++ ++++VSWNAM +GYAQN F +F +M
Sbjct: 32 MLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP------- 84
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
LKNG N L+ Y IE A ++F
Sbjct: 85 ---------------------------LKNGISWN-----GLLAAYVQNGRIEDAKRLFE 112
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+ +V W ++ G++ R LF+ P+RD I W+ +++GY EA
Sbjct: 113 SKMDWTLVSWNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHF 167
Query: 220 FDQMPKKDV-------------------------------------ISW---NTMLSGYA 239
F +M ++D W N +L+ Y
Sbjct: 168 FVEM-QRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYC 226
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G ++E + F+E+ E++V SWN +I GYA +G E L F+ M T G + P+DAT+V
Sbjct: 227 KCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTG-IRPDDATMV 285
Query: 300 TVLSACARLGALD-FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+VL+AC+ G +D S++ + G + ++D+ + G +E A ++ +M
Sbjct: 286 SVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPF 345
Query: 359 K-DLITWNTIISGLAMHGR---GAGALSLFHEMK--NAG 391
+ D TW ++ +HG G A + EM+ N+G
Sbjct: 346 EPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSG 384
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++V +G + Y+ ++ + + AR F +I +++VVSWN M +GYA++
Sbjct: 201 QLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHG 260
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
F + +F MK P+ T VL +C + +G E + + G A +
Sbjct: 261 FGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHY 320
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVW-----TSMINGYISCGDIVSARCLFELA 192
T +++L +E A + M E + W S I+G G+ +A+ +FE+
Sbjct: 321 TCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE-KAAQIIFEME 379
Query: 193 PE 194
P
Sbjct: 380 PH 381
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 198/561 (35%), Positives = 293/561 (52%), Gaps = 75/561 (13%)
Query: 24 QVVTSGLEKSDYITP-----RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+VV E++ +I+ +I A+ + AR +FD + D++V+SWNAM G AQN
Sbjct: 443 KVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQN 502
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+F QM++ +P+ T+ +L + +AL E+H ++ G ++ VG
Sbjct: 503 GCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVG 562
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+A I +Y I CG I AR LF+ R V
Sbjct: 563 SAFIHMY-------------------------------IRCGSIDDARLLFDKLSVRHVT 591
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK-------------------DVISW-------- 231
WN ++ G R EA LF QM ++ + + W
Sbjct: 592 TWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHA 651
Query: 232 -----------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
N ++ Y+ G+V+ K++F++M ERNV +W +IGG A +G +
Sbjct: 652 TDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFS 711
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F +ML EG + P+ T V++LSACA GAL++ K VH +A G ++ VGNAL+ MY
Sbjct: 712 HFLQMLREG-IVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMY 770
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
AKCG I++A VF+ M +D+ +W +I GLA HGRG AL F +MK+ G P+G +++
Sbjct: 771 AKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYV 830
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC+H GLV+EG F SM DY I P +EHY CMVDLL RAG L EA F+ MPI
Sbjct: 831 AVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPI 890
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
E D W LLG+C Y N+E+AE A + +L+PK+ + +V+LSNIY G+W+ +
Sbjct: 891 EPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLV 950
Query: 521 KVAMRDTGFKKLPGCSSIEVN 541
+ M+ G +K PG S IEV+
Sbjct: 951 RSMMQRKGIRKEPGRSWIEVD 971
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 223/397 (56%), Gaps = 17/397 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ SG+E++ Y+ +++ + ++ AR++FDK+ +N+ W M GYA+
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ ++ +M++ PN T+ +LK+C L+ G+++H ++++GF++++ V T
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVET 258
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+ +Y +IE A +F +M ERNV+ WT MI G G A LF L +R+ +
Sbjct: 259 ALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLF-LQMQREGFI 317
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKK-----------DVISWNTMLSGYANNGDVEECK 248
N+ Y+ + N + + + + D+ N ++ YA +G +++ +
Sbjct: 318 PNSYT--YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL--SACA 306
+F+ M ER++FSW +IGG A +G E F +M G PN T +++L SA A
Sbjct: 376 VVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNG-CLPNLTTYLSILNASAIA 434
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
AL++ K VH +AE G+ ++ +GNALI MYAKCG I++A VF+ M +D+I+WN
Sbjct: 435 STSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNA 494
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
++ GLA +G G A ++F +M+ G +PD T++ +L
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 207/406 (50%), Gaps = 26/406 (6%)
Query: 25 VVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITD-----------QNVVSWNAM 71
V++S ++ RI+ L +QM ++R F I+ +V NA
Sbjct: 26 VISSSFRMNEAQVQRILVGSTLLSGRQMRHSRLYFLSISGCFKSEKHKYLPSVLVCANAS 85
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMP----NCFTFPIVLKSCVKINALREGEELHCLVL 127
+G A+ + M K+ + F++ +L+ C+K + +++H ++
Sbjct: 86 VDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCII 145
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+G N++V L+ +Y ++ A +VF ++ ++N+ +WT+MI GY G A
Sbjct: 146 KSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMR 205
Query: 188 LFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYA 239
+++ + + I + +I+ N+ +K+ + + DV +++ Y
Sbjct: 206 VYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYV 265
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G +E+ + +F++M ERNV SW +IGG A+ G E F +M EG + PN T V
Sbjct: 266 KCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI-PNSYTYV 324
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++L+A A GAL++ K VH +A G ++ VGNAL+ MYAK G I++A VF+ M +
Sbjct: 325 SILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER 384
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
D+ +W +I GLA HGRG A SLF +M+ G +P+ T++ IL A
Sbjct: 385 DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNA 430
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 277/543 (51%), Gaps = 60/543 (11%)
Query: 2 KDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT 61
KD + ++T HL QI ++ GL + ++ + A L + ++ +F +
Sbjct: 23 KDNLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTP 82
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
+ NV W + N +A + + ++QM PN FT +LK+C L
Sbjct: 83 NPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARA 138
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H +K G ++++V T L++ Y+ G GD
Sbjct: 139 VHSHAIKFGLSSHLYVSTGLVDAYARG-------------------------------GD 167
Query: 182 IVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+ SA+ LF+ PER ++ + +++ Y + EAR LF+ M KDV+ WN M+ GYA +
Sbjct: 168 VASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQH 227
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G E +FF + G+V PN+ T+V V
Sbjct: 228 GCPNEAL-------------------------VFFRKMMMMMGGNGNGKVRPNEITVVAV 262
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LS+C ++GAL+ KWVH Y E NG + NV VG AL+DMY KCG +E+A VF+ M+ KD+
Sbjct: 263 LSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDV 322
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ WN++I G +HG AL LFHEM G P ITF+ +L AC H GLV +G F S
Sbjct: 323 VAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDS 382
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M Y + P++EHYGCMV+LL RAGR+ EA D V+ M +E D V+W LL +CR++ NV
Sbjct: 383 MKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVS 442
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L E E L + +V+LSN+Y W VA+++ M+ +G +K PGCSSIEV
Sbjct: 443 LGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVK 502
Query: 542 EVV 544
V
Sbjct: 503 NRV 505
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 308/602 (51%), Gaps = 75/602 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K LH + ++ S ++ +I A ++L +TYAR +FDK+ N SWN M + Y
Sbjct: 25 KKLHCL---IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAY 81
Query: 76 AQNEFHRTVVVLFTQMKKLDAMP--------------------------------NCFTF 103
+++ T+ +F+ M D + N TF
Sbjct: 82 SKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITF 141
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
+L + G ++H ++K GF A +FVG++L+++Y+ + A +VF E+ E
Sbjct: 142 STMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQE 201
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
RNVV++ +MI G + G + ++ LF ERD I W T+++G I EA LF M
Sbjct: 202 RNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDM 261
Query: 224 PKK----DVISWNTML---------------------SGYANN--------------GDV 244
++ D ++ ++L SGY +N V
Sbjct: 262 RQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSV 321
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ +F+ M +NV SW ++ GY NG E + F M G + P+D T+ +V+S+
Sbjct: 322 RYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG-IEPDDFTLGSVISS 380
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA L +L+ H A +G + V NALI +Y KCG IE++ +F+ M +D ++W
Sbjct: 381 CANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
++SG A G+ + LF M G PD +TFI +L AC+ GLVE G YF+SM
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK 500
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
D+ I+P +HY CM+DL RAGRL EA +F+ +MP D++ WA LL SCR+Y N E+ +
Sbjct: 501 DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGK 560
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A E L EL+P+NPA +++LS+IY G+W +VA+++ MR+ G +K PG S I+ V
Sbjct: 561 WAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKV 620
Query: 545 ML 546
+
Sbjct: 621 YI 622
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 191/435 (43%), Gaps = 74/435 (17%)
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
K C + + ++LHCL++K+ F+ LI YS I A VF +M + N
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
W +M++ Y GD+ + + +F + P RD + WN+++SGY+ +++EA K ++ M K
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 228 V-----ISWNTML-----------------------------------SGYANNGDVEEC 247
V I+++TML YA G V
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 248 KRLFEEMPERNV-------------------------------FSWNGLIGGYANNGLFF 276
++F+E+ ERNV SW +I G NGL
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E +D F+ M EG + T +VL+AC L AL K +H +GY NV VG+AL
Sbjct: 253 EAMDLFRDMRQEGMAM-DQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMY KC + A VF M K++++W ++ G +G A+ +F +M+ G PD
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
T ++ +C ++ +EEG + F A+ ++ I ++ L + G + ++
Sbjct: 372 FTLGSVISSCANLASLEEG-AQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430
Query: 457 RMPIEADAVIWANLL 471
M D V W L+
Sbjct: 431 EMSFR-DEVSWTALV 444
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 13/255 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K +I T ++ SG + ++ ++ + + + YA +F ++ ++NVVSW AM
Sbjct: 283 LRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GY QN F V +F M++ P+ FT V+ SC + +L EG + HC L +G
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE- 190
+ I V ALI LY +IE + ++F EM R+ V WT++++GY G LFE
Sbjct: 403 ISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFER 462
Query: 191 -----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYAN 240
L P D + + ++S + ++ F+ M K I + M+ +
Sbjct: 463 MLVQGLKP--DAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGR 520
Query: 241 NGDVEECKRLFEEMP 255
G +EE K +MP
Sbjct: 521 AGRLEEAKNFINKMP 535
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 315/584 (53%), Gaps = 69/584 (11%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWNAMFNGYAQNEFH 81
+ +G E + ++ ++ ++ + A +FD+IT + +V+SWN++ + +
Sbjct: 175 ICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNP 234
Query: 82 RTVVVLFTQM------KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
RT + LF++M K + + + +L +C + AL + +E+H ++NG A+
Sbjct: 235 RTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADA 294
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FV ALI+ Y+ +++ A VF M+ ++VV W +M+ GY G +A LF+ +
Sbjct: 295 FVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKE 354
Query: 196 ----DVILWNTIVSGYIDVRNMIEARKLFDQM------P--------------------- 224
DVI W+ +++GY EA F QM P
Sbjct: 355 NIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQG 414
Query: 225 --------KKDVISW----------------NTMLSGYANNGDVEECKRLFEEMP--ERN 258
KK ++S N ++ Y+ + + +F +P ERN
Sbjct: 415 METHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERN 474
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWV 317
V +W +IGGYA G + L F M+++ V PN TI +L ACA L +L K +
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQI 534
Query: 318 HVY-AEYNGYQGNVC-VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
H Y ++ Y+ +V V N LIDMY+KCG ++ A +VF+SM ++ ++W +++SG MHG
Sbjct: 535 HAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
RG AL +F +M+ AG +PD I+F+ +L AC+H G+V++GL YF M DY ++ +HY
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHY 654
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
C++DLLAR+GRL +A ++ MP+E A IW LL +CRV+ NVELAE AL +L ++
Sbjct: 655 ACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKA 714
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+N ++ ++SNIY RWKDVARI+ M+ +G KK PGCS ++
Sbjct: 715 ENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQ 758
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 230/516 (44%), Gaps = 76/516 (14%)
Query: 30 LEKSDYITPR-----IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
L Y++P+ ++ + + A + +++ V WN + + +
Sbjct: 74 LPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRA 133
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+ + +M + P+ FT P LK+C ++ + R G H L+ NGF +N+FV AL+ +
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAM 193
Query: 145 YSTGKAIEAAYKVFGEMDER---NVVVWTSMINGY------------------------- 176
YS ++E A VF E+ + +V+ W S++ +
Sbjct: 194 YSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKAT 253
Query: 177 ------ISCGDIVSARCLFELAPER--------------DVILWNTIVSGYIDVRNMIEA 216
IS +I+ A + P+ D + N ++ Y +M +A
Sbjct: 254 NERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDA 313
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN----VFSWNGLIGGYANN 272
+F+ M KDV+SWN M++GY +G LF+ M + N V +W+ +I GYA
Sbjct: 314 VNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQR 373
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA----------- 321
G E LD F++M+ G PN TI+++LSACA LGAL H Y+
Sbjct: 374 GYGQEALDTFQQMILYGSE-PNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDND 432
Query: 322 -EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD--LITWNTIISGLAMHGRGA 378
+G ++ V NALIDMY+KC + A +FNS+ ++ ++TW +I G A +G
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 379 GALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
AL LF EM K P+ T IL AC H+ + G + + +
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA 552
Query: 437 -CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
C++D+ ++ G + A + MP + + V W +++
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMM 587
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 157/398 (39%), Gaps = 96/398 (24%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L+ +I + + +G ++ +I A+ M A +F+ + ++VVSWNA
Sbjct: 271 SLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNA 330
Query: 71 MFNGYAQNEFHRTVVVLFTQMKK----LDAM----------------------------- 97
M GY Q+ LF M+K LD +
Sbjct: 331 MVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG 390
Query: 98 --PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA------------NIFVGTALIE 143
PN T +L +C + AL +G E H LK + ++ V ALI+
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALID 450
Query: 144 LYSTGKAIEAAYKVFGEMD--ERNVVVWTSMINGYISCGDIVSARCLFE--------LAP 193
+YS ++ +AA +F + ERNVV WT MI GY GD A LF +AP
Sbjct: 451 MYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAP 510
Query: 194 ERDVI-----------------------------------LWNTIVSGYIDVRNMIEARK 218
I + N ++ Y ++ AR
Sbjct: 511 NAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARN 570
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV----FSWNGLIGGYANNGL 274
+FD MPK++ +SW +M+SGY +G +E +F++M + S+ L+ +++G+
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ LD F M ++ V + V+ AR G LD
Sbjct: 631 VDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLD 668
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 298/530 (56%), Gaps = 9/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+ SG E + IIT ++ + ARK+FD + + V+WN + GY QN
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F V LF M + TF L S +K +L+ +E+H ++++G ++++ +
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
AL+++Y G +E A K F + +V V T+MI+GY+ G V A LF +
Sbjct: 419 ALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVP 478
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLF 251
+ + +++ + ++ ++L + KK + + +++ YA +G ++ + F
Sbjct: 479 NCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFF 538
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP ++ WN +I ++ NG +D F++M T G F + ++ LSACA AL
Sbjct: 539 RRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKF-DSVSLSATLSACANYPAL 597
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H + N + + V + LIDMY+KCG + A VF+ MD K+ ++WN+II+
Sbjct: 598 YYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAY 657
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HGR L LFHEM AG PD +TF+ I+ AC H GLV+EG+ YF+ M +Y I +
Sbjct: 658 GNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICAR 717
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EH+ CMVDL RAGRL EA D +K MP DA W +LLG+CR++ NVELA+LA + L
Sbjct: 718 MEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLV 777
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+P N +V+LSN++ G W+ V +++ M++ G +K+PG S I+VN
Sbjct: 778 ELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVN 827
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 225/512 (43%), Gaps = 83/512 (16%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ + QI +V+ G+ S + R++ + +F ++ + WN + G+
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ ++ F +M + P+ +TFP V+K+C +N + + +H L GF ++
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI------------- 182
F+G++LI+LY+ I A +F E+ R+ ++W M+NGY+ GD
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272
Query: 183 ------VSARCLFELAPERDVI--------------------LWNTIVSGYIDVRNMIEA 216
VS CL + R ++ + NTI++ Y N+ +A
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
RK+FD MP+ D ++WN +++GY NG +E L
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVAL-------------------------- 366
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
FK M+T G V + T + L + + G+L + K VH Y +G +V + +AL
Sbjct: 367 -----FKAMVTSG-VKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSAL 420
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+D+Y K G +E A F D+ +ISG ++G AL+LF + G +P+
Sbjct: 421 VDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNC 480
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD-----LLARAGRLAEA 451
+T +L AC + ++ G + I+ + C V + A++GRL A
Sbjct: 481 LTMASVLPACAALASLKLG------KELHCDILKKGLENVCQVGSSITYMYAKSGRLDLA 534
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
F +RMP++ D+V W ++ S ELA
Sbjct: 535 YQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 197/408 (48%), Gaps = 12/408 (2%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A+ +FD++ ++ + WN M NGY +N + + F +M+ PN +F +L C
Sbjct: 231 AKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCAT 290
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+R G +LH LV+++GF ++ V +I +YS + A K+F M + + V W +
Sbjct: 291 RGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGL 350
Query: 173 INGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-- 226
I GY+ G A LF+ + D I + + + + ++ +++ + +
Sbjct: 351 IAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGV 410
Query: 227 --DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKR 284
DV + ++ Y GDVE + F++ +V +I GY NGL E L+ F+
Sbjct: 411 PFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRW 470
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC-VGNALIDMYAKC 343
++ EG V PN T+ +VL ACA L +L K +H G + NVC VG+++ MYAK
Sbjct: 471 LIQEGMV-PNCLTMASVLPACAALASLKLGKELHCDILKKGLE-NVCQVGSSITYMYAKS 528
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G ++ A F M KD + WN +I + +G+ A+ LF +M +G D ++ L
Sbjct: 529 GRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATL 588
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
AC + + G + S + ++D+ ++ G+LA A
Sbjct: 589 SACANYPALYYG-KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALA 635
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 283/526 (53%), Gaps = 65/526 (12%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
HQ+ ++ GL+ + + +++ A + + +F+ I + + + +N+M YA+
Sbjct: 90 HQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARY 149
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
F V + M + FTFP VLKS V++ ++ G+ +H L+L+ G + +++V
Sbjct: 150 GFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVA 209
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T+LI L Y CG+I
Sbjct: 210 TSLIIL-------------------------------YGKCGEIN--------------- 223
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
+A K+FD M +DV SWN +L+GY +G ++ +FE MP RN
Sbjct: 224 ----------------DAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 267
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWV 317
+ SW +I GY+ +GL + L F M+ E V PN TI++VL ACA+L L+ + +
Sbjct: 268 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 327
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD--TKDLITWNTIISGLAMHG 375
H A G N V AL MYAKCG + +A + F+ ++ K+LI WNT+I+ A +G
Sbjct: 328 HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 387
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G A+S F EM AG PD ITF G+L C+H GLV+ GL YF M+ YSI P++EHY
Sbjct: 388 HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHY 447
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
C+ DLL RAGRLAEA V MP+ A IW +LL +CR ++N+E+AE A +L LEP
Sbjct: 448 ACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP 507
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+N N+V+LSN+Y + GRW++V +++ ++ G KK PGCS IE+N
Sbjct: 508 ENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEIN 553
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 34/216 (15%)
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L L VH + G Q VG+ ++ YA G I+++V VFN + + +N++
Sbjct: 83 LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSM 142
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA-----------CTHMGLVEEGL 416
I A +G ++ + M + G D TF +L + C H ++ GL
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGL 202
Query: 417 SY----FQSMAMDYSIVPQIEHYGCMVD------------LLA---RAGRLAEAVDFVKR 457
+ S+ + Y +I G + D LLA ++G + A+ +R
Sbjct: 203 QFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFER 262
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
MP + V W ++ Y LA+ AL E+
Sbjct: 263 MPWR-NIVSWTTMISG---YSQSGLAQQALSLFDEM 294
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 293/534 (54%), Gaps = 14/534 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE- 79
I GL +++ +I + + A +F K+ ++VV+WNAM GYA +
Sbjct: 121 IHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGM 180
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---IF 136
+H + L + PN T +L + AL +G +H L+ N +
Sbjct: 181 YHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVL 240
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPER 195
+GTAL+++Y+ K + A +VF M RN V W+++I G++ C + A LF ++ E
Sbjct: 241 IGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEG 300
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEEC 247
L T V+ + V + ++ Q+ D+ + N++LS YA G + E
Sbjct: 301 MCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEA 360
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF+E+ ++ S+ L+ GY NG E FK+M V P+ AT+V+++ AC+
Sbjct: 361 TMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM-QACNVQPDIATMVSLIPACSH 419
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L AL + H G + N+LIDMYAKCG I+ + VF+ M +D+++WNT+
Sbjct: 420 LAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTM 479
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G +HG G A +LF MKN G PD +TFI ++ AC+H GLV EG +F +M Y
Sbjct: 480 IAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYG 539
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I+P++EHY CMVDLLAR G L EA F++ MP++AD +W LLG+CR++KN++L +
Sbjct: 540 ILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVS 599
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ +L P+ NFV+LSNI+ GR+ + A +++ + GFKK PGCS IE+N
Sbjct: 600 RMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEIN 653
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 206/450 (45%), Gaps = 42/450 (9%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
Q+ AR++FD+I + ++NA+ Y+ + FH + L+ M PN +TFP VL
Sbjct: 48 QLALARQVFDRIPAPDARAYNALIRAYSWRGPFH-AAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
K+C + L G +H G ++FV TALI+LY A VF +M R+VV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 168 VWTSMINGYISCG----------DI-------VSARCLFELAP---ERDVILWNTIVSGY 207
W +M+ GY + G D+ +A L L P + + T V Y
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
R DQ ++ V+ +L YA + R+F M RN +W+ LIG
Sbjct: 227 C-------LRAYLDQ-NEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ E + FK ML EG F + ++ + L CA L L +H +G
Sbjct: 279 GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIH 338
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
++ GN+L+ MYAK G+I A +F+ + KD I++ ++SG +G+ A +F +M
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS-----MAMDYSIVPQIEHYGCMVDLL 442
+ PD T + ++ AC+H+ ++ G S +A++ SI ++D+
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSIC------NSLIDMY 452
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
A+ GR+ + +MP D V W ++
Sbjct: 453 AKCGRIDLSRQVFDKMPAR-DIVSWNTMIA 481
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 18/321 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ +++ A+ + A +FD+I ++ +S+ A+ +GY QN
Sbjct: 327 QLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNG 386
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G H V+ G +
Sbjct: 387 KAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICN 446
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
+LI++Y+ I+ + +VF +M R++V W +MI GY G A LF E
Sbjct: 447 SLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEP 506
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRL 250
D + + +++ + E + FD M K I + M+ A G ++E +
Sbjct: 507 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQF 566
Query: 251 FEEMP-ERNVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ MP + +V W L+G + N L +V +++ EG N + + SA
Sbjct: 567 IQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGT--GNFVLLSNIFSAAG 624
Query: 307 RLGALDFSKWVHVYAEYNGYQ 327
R D + V + + G++
Sbjct: 625 R---FDEAAEVRIIQKVKGFK 642
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 284/525 (54%), Gaps = 40/525 (7%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
+ Q QM A + FD++ ++++VSWN M G+ + F +++ PN
Sbjct: 181 LAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIES----PNV 236
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
++ +L + + + +L + + N+ +++ Y +E A K+F E
Sbjct: 237 VSWVTLLNGYCRAGRISDARDLFDRMPER----NVVACNVMLDGYVRLSRLEEACKLFDE 292
Query: 161 MDERNVVVWTSMINGYISCGDIV-------------------------------SARCLF 189
M +N + WT++I+G G + AR +F
Sbjct: 293 MPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIF 352
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ D + WNT++SGY+ + EA LF +MP KD +SWNTM++GYA G + +
Sbjct: 353 DGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIG 412
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +N SWN +I G+ NGLF + F ++ G + +T + L ACA L
Sbjct: 413 IFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFM-LMRRGTNRADWSTYASCLRACANLA 471
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + +H +G+ ++ NALI YAKCG + A +F+ M KD+++WN ++
Sbjct: 472 ALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVD 531
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A +G+G A+S+F EM+ G PD +TF+GIL AC+ GL++EGL +F SM +YS+
Sbjct: 532 GYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLK 591
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P EHY CM DLL RAG+L EA + V+ M I+ +A +W LLG+C++YKN ELA LA E+
Sbjct: 592 PVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEK 651
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
L+ELEP +N+V+LSNI + G+W + + + ++++ G K PG
Sbjct: 652 LSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 203/473 (42%), Gaps = 84/473 (17%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFDKIT-DQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
+ D+ +++ A+ ++ AR + D++ D+ +NAM +GYA+N V L +
Sbjct: 109 RDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLRE 168
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINAL-REGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
M P+ F++ L + + R + +V K+ N+ ++E +
Sbjct: 169 MPA----PDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNL-----MLEGFVRAG 219
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID 209
++AA FG ++ NVV W +++NGY G I AR LF+ PER+V+ N ++ GY+
Sbjct: 220 DLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVR 279
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-------------- 255
+ + EA KLFD+MP K+ ISW T++SG A G ++E K L ++M
Sbjct: 280 LSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGY 339
Query: 256 --------ERNVFS---------WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
R +F WN +I GY G+ E + F+RM PN T+
Sbjct: 340 LQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRM-------PNKDTV 392
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
W N +I YA+ G + A+ +F M
Sbjct: 393 ----------------SW-----------------NTMIAGYAQGGQMRKAIGIFRRMSR 419
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K+ ++WN++ISG +G A F M+ D T+ L AC ++ + G
Sbjct: 420 KNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVG-RQ 478
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
S+ + + + ++ A+ GR+ EA M + D V W L+
Sbjct: 479 LHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEM-VGKDIVSWNALV 530
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 175/425 (41%), Gaps = 98/425 (23%)
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
FR+N L L +G+ + AA ++F M RN V + SM++ G I AR LF+
Sbjct: 19 FRSN----QELTRLARSGQ-LAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFD 73
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW------------------- 231
P R+ + WN +++ D + +AR LFD+MP +D SW
Sbjct: 74 GMPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDV 133
Query: 232 -------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
N M+SGYA NG ++ +L EMP ++FSWN + G +G
Sbjct: 134 LDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRA 193
Query: 279 LDAFKRMLTEGRV--------FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY---- 326
+ F M+ + V F + S R+ + + WV + NGY
Sbjct: 194 VQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTL---LNGYCRAG 250
Query: 327 -------------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ NV N ++D Y + +E A +F+ M K+ I+W TIISGLA
Sbjct: 251 RISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLAR 310
Query: 374 HGRGAGALSLFHEMK---------------------NAGEMPDGITFIGILCACT----- 407
G+ A L +M +A ++ DG+ +C T
Sbjct: 311 AGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGY 370
Query: 408 -HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
G++EE + FQ M ++ + M+ A+ G++ +A+ +RM + V
Sbjct: 371 VQRGMLEEAMLLFQRMPNKDTV-----SWNTMIAGYAQGGQMRKAIGIFRRMS-RKNTVS 424
Query: 467 WANLL 471
W +++
Sbjct: 425 WNSVI 429
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I AQ QM A +F +++ +N VSWN++ +G+ QN F M++ +
Sbjct: 397 MIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRAD 456
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L++C + AL G +LH L++++G ++F ALI Y+ + A ++F
Sbjct: 457 WSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFD 516
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE 190
EM +++V W ++++GY S G A +F
Sbjct: 517 EMVGKDIVSWNALVDGYASNGQGTEAISVFR 547
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + +V SG + +I+ A+ +M A+++FD++ +++VSWNA+ +GYA N
Sbjct: 477 RQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASN 536
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ +F +M+ P+ TF +L +C + + EG
Sbjct: 537 GQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEG 577
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 324/647 (50%), Gaps = 117/647 (18%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ G+HS K HQ+ QVV Y+ ++ A ++ A + + ++
Sbjct: 162 SGGSHS------KFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPER 215
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ VSWNA+ NGYA++ +R V+++ ++ + +T P VLK C+++ + G+ +H
Sbjct: 216 SDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVH 275
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI---------- 173
V+K G + + + L+E+YS + E AY+VF +DE +VV ++MI
Sbjct: 276 ASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAW 335
Query: 174 ----------------NGYI---------SCGDIVSARCLFELAPERDVILW----NTIV 204
N YI GD R + + + + I+
Sbjct: 336 EALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAIL 395
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+ Y+ V + +A FD + + D SWNT+LS + + + E+ R+F++M FS N
Sbjct: 396 NMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEG-FSANK 454
Query: 265 ----------------------------------------LIGGYANNGLF------FEV 278
L+ YA +G F FE
Sbjct: 455 YTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQ 514
Query: 279 L---DAFK---------------------RMLTEGRVFPNDATIVTVLSACARLGALDFS 314
L DAF R + + P+DAT+ LS C+ + +L
Sbjct: 515 LKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSG 574
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+H +A +G+ +V V AL+DMY KCG I +A +F+ +T+D + WNTII G + H
Sbjct: 575 LQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQH 633
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G G AL F +M + G+ PDGITF+G+L AC+H GL+ EG YF+S++ Y I P +EH
Sbjct: 634 GHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEH 693
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
Y CMVD+L++AGRL EA + +MP+ D+ IW +LG+CR+++N+E+AE A ERL ELE
Sbjct: 694 YACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELE 753
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
P + ++ ++LSNIY DLGRW DV R++ + D G KK PGCS IE+N
Sbjct: 754 PHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEIN 800
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 229/515 (44%), Gaps = 29/515 (5%)
Query: 5 TGAHSEQLE-------------TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT 51
T AH+E+L T + ++ +++ S L ++ ++ + ++
Sbjct: 43 TVAHAEELRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLV 102
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
AR++FD + +++V+W AM + + + +F +M + PN FT VLK+C
Sbjct: 103 DARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACS 162
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ + ++H V+K + +VG++L+E Y++ ++AA V + ER+ V W +
Sbjct: 163 GGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNA 222
Query: 172 MINGYISCGDIVSARCLFE-LAPERDVILWNTIVS--------GYIDVRNMIEARKLFDQ 222
++NGY GD + E L D I T+ + G + A +
Sbjct: 223 LLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRG 282
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+ +V++ + ++ Y+ EE +F + E +V + +I + + + +E LD F
Sbjct: 283 LETDNVLN-SCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLF 341
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+M G V PN V + +R G + + VH Y +G+ VG+A+++MY K
Sbjct: 342 VKMSGMG-VKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVK 400
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G +++A F+ + D +WNTI+S L +F +M G + T++ +
Sbjct: 401 VGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSV 460
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L CT + + G + + + + + +VD+ A++G A +++ E
Sbjct: 461 LRCCTSLMNLRFG-TQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ER 518
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
DA W ++ Y E AE +E + +N
Sbjct: 519 DAFSWTVIMSG---YAKTEEAEKVVEYFRSMLREN 550
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 298/532 (56%), Gaps = 12/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q+V G +++ ++ A+L+++ + K+F+ +T+ NVVSWNAM G+ N+
Sbjct: 193 VHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDL 252
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF +M P+ TF V K+ + + + +E+ L+ G +N VGTA
Sbjct: 253 YLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTA 312
Query: 141 LIELYSTGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI++ S +++ A +F + R W +MI+GY+ G A LF + D+
Sbjct: 313 LIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372
Query: 199 L--------WNTIVS-GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
L +N I + + + + AR + + V N + + YA G +E+ ++
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +R++ SW L+ Y+ + + ++ F M EG + PN T +VL +CA L
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEG-IAPNQFTFSSVLVSCANLC 491
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L++ + VH G + C+ +AL+DMYAKCG + +A VFN + D ++W II+
Sbjct: 492 LLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A HG AL LF M G P+ +TF+ +L AC+H GLVEEGL YF+ M Y +V
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV 611
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P++EHY C+VDLL+R G L +A++F+ RMP+E + ++W LLG+CRV+ NVEL ELA ++
Sbjct: 612 PEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQK 671
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ + +N A +V+LSN Y + G +KD ++ M++ G KK PGCS I VN
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVN 723
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 31/484 (6%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
+ A ++ + A ++FD+++ +N SW + G A+N F +M+ P
Sbjct: 110 HVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFP 169
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ F + +L+ C+ ++++ G +H ++ GF ++ FV TAL+ +Y+ + IE +YKVF
Sbjct: 170 DQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVF 229
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRN 212
M E NVV W +MI G+ S + A LF + P+ + G + R+
Sbjct: 230 NTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGML--RD 287
Query: 213 MIEARKL----FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE--MPERNVFSWNGLI 266
+ +A+++ + + + ++ + G ++E + +F + R WN +I
Sbjct: 288 VNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMI 347
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY +G + L+ F +M + ++ + T +V +A A L L K VH A +G
Sbjct: 348 SGYLRSGFNEKALELFAKM-CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL 406
Query: 327 QGN-VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ N V + NA+ + YAKCG +E+ VFN M+ +DLI+W ++++ + A+ +F
Sbjct: 407 EVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFS 466
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ-----SMAMDYSIVPQIEHYGCMVD 440
M+ G P+ TF +L +C ++ L+E G + MD I +VD
Sbjct: 467 NMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCI------ESALVD 520
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EPKNP 498
+ A+ G L +A R+ AD V W ++ + V+ A R+ +L EP N
Sbjct: 521 MYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEP-NA 578
Query: 499 ANFV 502
F+
Sbjct: 579 VTFL 582
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 208 IDVRNMIEARKLFDQMPKK------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+D R + +A+ + + K ++ N + Y+ D++ RLF++M +RN FS
Sbjct: 79 VDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFS 138
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
W LI G A NGLF + + F M ++G +FP+ +L C L +++ VH
Sbjct: 139 WTVLIAGLAENGLFLDGFEFFCEMQSQG-IFPDQFAYSGILQICIGLDSIELGNMVHAQI 197
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G+ + V AL++MYAK IE++ VFN+M ++++WN +I+G + A
Sbjct: 198 VIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAF 257
Query: 382 SLFHEMKNAGEMPDGITFIGI 402
LF M G PD TFIG+
Sbjct: 258 DLFLRMMGEGVTPDAQTFIGV 278
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 298 IVTVLSACARLGALDFSKWVHVY---AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+V +L C L +K VH + ++++ + V + N + Y+KC I+ A +F+
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLL-NHVAHAYSKCSDIDAACRLFD 129
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M ++ +W +I+GLA +G F EM++ G PD + GIL C + +E
Sbjct: 130 QMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIEL 189
Query: 415 G 415
G
Sbjct: 190 G 190
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 303/535 (56%), Gaps = 17/535 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA-QNE 79
+ +GL +++ ++ A+ +A +F ++ ++VV+WNAM GYA +
Sbjct: 151 VHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGK 210
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK----NGFRANI 135
+ T+ L + + D PN T +L + AL +G +H ++ + + +
Sbjct: 211 YSDTIACLL--LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGV 268
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE 194
VGTAL+++Y+ + A +VF M RN V W++++ G++ CG ++ A LF ++ +
Sbjct: 269 LVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQ 328
Query: 195 RDVILWNTIVSGYI----DVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEE 246
L T V+ + ++ ++ ++L + K D+ + N++LS YA G +++
Sbjct: 329 GLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQ 388
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LF++M ++ S++ L+ GY NG E F++M V P+ AT+V+++ AC+
Sbjct: 389 ATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM-QACNVQPDVATMVSLIPACS 447
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L AL K H G + NALIDMYAKCG I+ + +F+ M +D+++WNT
Sbjct: 448 HLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNT 507
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+G +HG G A +LF +MK+ PD +TFI ++ AC+H GLV EG +F MA Y
Sbjct: 508 MIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKY 567
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P++EHY MVDLLAR G L EA F++ MP++AD +W LLG+CRV+KN++L +
Sbjct: 568 GITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQV 627
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ +L P+ NFV+LSNI+ GR+ + A +++ ++ GFKK PGCS IE+N
Sbjct: 628 SSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEIN 682
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 207/436 (47%), Gaps = 17/436 (3%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++ AR +FD+I + +NA+ Y+ + + + ++ PN +TFP VLK+
Sbjct: 79 LSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKA 138
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C + LR +HC + G A++FV TAL+++Y+ + A VF M R+VV W
Sbjct: 139 CSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAW 198
Query: 170 TSMINGYISCG---DIVSARCLFE--LAPERDVIL--------WNTIVSGYIDVRNMIEA 216
+M+ GY G D ++ L + AP ++ + G + A
Sbjct: 199 NAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRA 258
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
L D K V+ +L YA G + R+FE M RN +W+ L+GG+ G
Sbjct: 259 CSLHDH--KDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML 316
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E FK ML +G F + ++ + L ACA L L K +H +G ++ GN+L
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSL 376
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+ MYAK G+I+ A +F+ M KD ++++ ++SG +G+ A +F +M+ PD
Sbjct: 377 LSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDV 436
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
T + ++ AC+H+ ++ G S+ + I + ++D+ A+ GR+ +
Sbjct: 437 ATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCGRIDLSRQIFD 495
Query: 457 RMPIEADAVIWANLLG 472
MP D V W ++
Sbjct: 496 VMPAR-DIVSWNTMIA 510
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
GD+ + LF+++P + +N LI Y+ G + PN+ T V
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQ-PNNYTFPFV 135
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L AC+ L L ++ VH +A G ++ V AL+D+YAKC +A VF M +D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ WN +++G A+HG+ + ++ M++ P+ T + +L G + +G +
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 422 MAMDYSIVPQIEHY---GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
S+ + ++D+ A+ G L A + M + + V W+ L+G
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVG 307
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 13/283 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SGL +++ A+ + A +FD++ ++ VS++A+ +GY QN
Sbjct: 356 QLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNG 415
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+F +M+ + P+ T ++ +C + AL+ G+ H V+ G + +
Sbjct: 416 KADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICN 475
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI++Y+ I+ + ++F M R++V W +MI GY G A LF A E
Sbjct: 476 ALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEP 535
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRL 250
D + + ++S + E ++ F M K I+ + M+ A G ++E +
Sbjct: 536 DDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQF 595
Query: 251 FEEMP-ERNVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEG 289
+ MP + +V W L+G + N L +V +++ EG
Sbjct: 596 IQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEG 638
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 286/518 (55%), Gaps = 29/518 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ +M A K+F+ + ++N VS NA+ G+ N + V F MP
Sbjct: 141 VISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFR------TMPE 194
Query: 100 CFTFPIVLKSCVKINALREGE-ELHCLVL---KNGFRANIFVGTALIELYSTGKAIEAAY 155
++ + S + +R GE ++ +L NG + LI Y +E A
Sbjct: 195 HYSTSL---SALISGLVRNGELDMAAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEAR 251
Query: 156 KVF-------GEMDE------RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
++F G+ DE RNVV W SM+ Y+ GDIVSAR LF+ E+D WNT
Sbjct: 252 RLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNT 311
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
++SGY+ + NM EA KLF +MP DV+SWN ++SG+A GD+ K FE MP +N+ SW
Sbjct: 312 MISGYVQISNMEEASKLFREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLKNLISW 371
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N +I GY N + + F RM EG P+ T+ +V+S C L L K +H
Sbjct: 372 NSIIAGYEKNEDYKGAIQLFSRMQFEGER-PDRHTLSSVMSVCTGLVNLYLGKQIHQLVT 430
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGAGAL 381
+ + N+LI MY++CG I +A VFN + KD+ITWN +I G A HG A AL
Sbjct: 431 -KIVIPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEAL 489
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF MK P ITFI ++ AC H GLVEEG F+SM DY I ++EH+ +VD+
Sbjct: 490 ELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDI 549
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
L R G+L EA+D + MP + D +W LL +CRV+ NVELA +A + L LEP++ A +
Sbjct: 550 LGRQGQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALVAADALIRLEPESSAPY 609
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
V+L NIY +LG+W D ++V M + KK G S ++
Sbjct: 610 VLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYSWVD 647
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 33/345 (9%)
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
L +G+ EA +F M R+ V W SMI GY+ +I AR LF+ P RDV+ WN I
Sbjct: 49 LIRSGRLSEAR-ALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVVSWNLI 107
Query: 204 VSGYIDVRN---MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
VSGY R + E R+LF+ MP++D +SWNT++SGYA NG +++ +LF MPERN
Sbjct: 108 VSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAV 167
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
S N LI G+ NG +D F+ M ++ ++S R G LD + +
Sbjct: 168 SSNALITGFLLNGDVDSAVDFFRTMPEH-----YSTSLSALISGLVRNGELDMAAGILCE 222
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-------------TKDLITWNTI 367
NG V N LI Y + G +E A +F+ + +++++WN++
Sbjct: 223 CG-NGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSM 281
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+ G A LF M D ++ ++ + +EE F+ M
Sbjct: 282 MMCYVKAGDIVSARELFDRMVEQ----DTCSWNTMISGYVQISNMEEASKLFREMP---- 333
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+P + + +V A+ G L A DF +RMP++ + + W +++
Sbjct: 334 -IPDVLSWNLIVSGFAQKGDLNLAKDFFERMPLK-NLISWNSIIA 376
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 149/305 (48%), Gaps = 32/305 (10%)
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD---IVSARCLFELAPER 195
++I Y + I A ++F EM R+VV W +++GY SC + R LFEL P+R
Sbjct: 74 NSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVSGYFSCRGSRFVEEGRRLFELMPQR 133
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D + WNT++SGY M +A KLF+ MP+++ +S N +++G+ NGDV+ F MP
Sbjct: 134 DCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALITGFLLNGDVDSAVDFFRTMP 193
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV--TVLSACARLGALDF 313
E S + LI G NG LD +L E +D T+++ + G ++
Sbjct: 194 EHYSTSLSALISGLVRNG----ELDMAAGILCECGNGDDDLVHAYNTLIAGYGQRGHVEE 249
Query: 314 SKWVHVYAEYNG--------------YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++ + ++G ++ NV N+++ Y K G I +A ++F+ M +
Sbjct: 250 ARRL-----FDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARELFDRMVEQ 304
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D +WNT+ISG A LF EM +PD +++ I+ G + +F
Sbjct: 305 DTCSWNTMISGYVQISNMEEASKLFREMP----IPDVLSWNLIVSGFAQKGDLNLAKDFF 360
Query: 420 QSMAM 424
+ M +
Sbjct: 361 ERMPL 365
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 30/298 (10%)
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N +S I + EAR LFD M +D ++WN+M++GY + ++ ++LF+EMP R+V
Sbjct: 43 NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVV 102
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGR----VFPNDATIV--TVLSACARLGALDFS 314
SWN ++ GY F + R + EGR + P + TV+S A+ G +D +
Sbjct: 103 SWNLIVSGY------FSCRGS--RFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQA 154
Query: 315 -KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K + E N NALI + G +++AVD F +M + + +ISGL
Sbjct: 155 LKLFNAMPERNAVS-----SNALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVR 209
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS------ 427
+G A + E N G+ + ++ G VEE F + D
Sbjct: 210 NGELDMAAGILCECGN-GDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQ 268
Query: 428 --IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ + M+ +AG + A + RM +E D W ++ N+E A
Sbjct: 269 RRFRRNVVSWNSMMMCYVKAGDIVSARELFDRM-VEQDTCSWNTMISGYVQISNMEEA 325
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 292/546 (53%), Gaps = 50/546 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ ++ L QI + + GL R+I C + M YA ++FD I ++
Sbjct: 15 EKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFI 74
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN M GY++ V ++ M + P+ FTFP LK + AL+ G+EL +
Sbjct: 75 WNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAV 134
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF +N+FV A I ++S ++ A+KV
Sbjct: 135 KHGFDSNLFVQKAFIHMFSLCGIVDLAHKV------------------------------ 164
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLF--DQMPKKDVISWNTMLSGYANNGDVE 245
F++ +V+ WN ++SGY V+ ++ L K + W + Y N G VE
Sbjct: 165 -FDMGDACEVVTWNIMLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVE 223
Query: 246 ----------ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
E + +F+ M R+V SW +I GY F L F+ M V P++
Sbjct: 224 HMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREM-QMSNVKPDE 282
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T+V++L ACA LGAL+ +WV + N + + VGNAL+DMY KCG + A VF
Sbjct: 283 FTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKE 342
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
M KD TW T+I GLA++G G AL++F M A PD IT+IG+LCAC +V++G
Sbjct: 343 MYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKG 398
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
S+F +M M + I P + HYGCMVDLL G L EA++ + MP++ ++++W + LG+CR
Sbjct: 399 KSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACR 458
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
V+KNV+LA++A +++ ELEP+N A +V+L NIY +W+++ +++ M + G KK PGC
Sbjct: 459 VHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGC 518
Query: 536 SSIEVN 541
S +E+N
Sbjct: 519 SLMELN 524
>gi|357163369|ref|XP_003579710.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 548
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 289/527 (54%), Gaps = 5/527 (0%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV--VSW 68
+ T + L Q+ ++V GL + R AC L + A + V
Sbjct: 18 RCRTARCLAQLHARIVRLGLHNHHSLLARFAAACDALASPSVADSFLSALPSHAVPLSIR 77
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + +++ R + F +++ A P+ F+FP +L++C + G LH ++
Sbjct: 78 NTVLASLSRHSSLRAALAQFNMIRR-TAGPDAFSFPPLLRACAHVPCTSTGTALHAAAIR 136
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G A++FV TALI+ Y +A AA +F M + V WT++I Y++ G+IV+AR L
Sbjct: 137 LGLDADLFVRTALIQFYGRCRAAGAARALFDSMTIPSDVSWTAIIIVYVNSGEIVAAREL 196
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
F+ P R+++ WN +V GY+ ++ A +LF++MP+K + +++ GYA G++E K
Sbjct: 197 FDRIPHRNLVHWNAMVDGYVKCGDLESAGRLFEEMPRKTAAAHTSLIGGYAKAGNMEGAK 256
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
LF+++ +R+VF+W+ +I GYA NG E F + + P++ IV +++AC++L
Sbjct: 257 LLFDKLQDRDVFAWSAMISGYAQNGYPGEAFRIFNEFHKQD-ICPDEPVIVALMAACSQL 315
Query: 309 GALDFSKWVHVY-AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
G + ++W+ Y Y+ N V LI+M AKCG +E A +F SM +D+ ++ ++
Sbjct: 316 GNIMLARWIEGYIGSYSIDINNAHVLAGLINMNAKCGNMERATVLFESMPVRDVFSYCSM 375
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+ G +HG A+ LF M G PD F +L AC H GLVEE YF M YS
Sbjct: 376 MQGHCLHGSANKAVELFSRMLLEGLSPDNAVFTVVLTACNHAGLVEEAKKYFGMMKNVYS 435
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
IVP +HY C+V LL R G L +A + +K MP E A W LLG C + + EL ++A
Sbjct: 436 IVPSGDHYACLVSLLGRFGILRDAYEIIKSMPGEPHAGSWGALLGGCILQCDTELGKIAA 495
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
++L E+EP N N+V LSNIY ++ RW DV++I+ M G K+ G
Sbjct: 496 KKLFEIEPDNAGNYVTLSNIYANIDRWTDVSKIRAEMSRKGLTKIAG 542
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 290/520 (55%), Gaps = 16/520 (3%)
Query: 33 SDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM 91
SD I AC + ++ ARK+FD + +++ V WN M +G +N +++F M
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM 198
Query: 92 KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
K + T VL ++ L G + CL +K GF ++ +V T L LYS I
Sbjct: 199 VKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEI 258
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVILWNTIVS----- 205
E A +FG++ + ++V + +MI+GY + S+ LF EL + + ++IV
Sbjct: 259 ETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF 318
Query: 206 ---GYIDVRNMIEA--RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
G++ + I K + T+ Y+ ++E + LF+E E+++
Sbjct: 319 FPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTV---YSRLNEIESARLLFDESSEKSLA 375
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN +I GYA NGL + + F+ M + V PN T+ ++LSACA+LGAL KWVH
Sbjct: 376 SWNAMISGYAQNGLTEKAISLFQEM-QKCEVRPNPVTVTSILSACAQLGALSLGKWVHDL 434
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
++ N+ V ALIDMYAKCG I A +F+ M K+ +TWN +ISG +HG G A
Sbjct: 435 INRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEA 494
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L+LF+EM ++ P G+TF+ +L AC+H GLV EG F+SM D+ P EHY CMVD
Sbjct: 495 LNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVD 554
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG L +A+DF+++MP+E +W LLG+C ++K+ LA LA ++L EL+P+N
Sbjct: 555 LLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGY 614
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+V+LSNIY + + A ++ ++ K PGC+ IEV
Sbjct: 615 YVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEV 654
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 250/564 (44%), Gaps = 35/564 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
++ T L+Q Q++ +GL ++ + LK + A +F I + ++ +N
Sbjct: 19 RVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNV 78
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ ++ N + V L+T ++K + P+ FT+ V+ + +
Sbjct: 79 LIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA--- 135
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI--SC-------- 179
GF +++FVG+A++ Y + AA KVF M ER+ V+W +M++G + SC
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG-- 237
GD+V F D ++ G +++++ + K S +++G
Sbjct: 196 GDMVKGGIGF------DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249
Query: 238 --YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
Y+ G++E + LF ++ + ++ S+N +I GY N + FK +L G N
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKV-NS 308
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
++IV ++ G L ++ +H + +G N V AL +Y++ IE+A +F+
Sbjct: 309 SSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDE 368
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
K L +WN +ISG A +G A+SLF EM+ P+ +T IL AC +G + G
Sbjct: 369 SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG 428
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
+ + S I ++D+ A+ G + EA MP E +AV W ++
Sbjct: 429 -KWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISG-- 484
Query: 476 VYKNVELAELALERLTEL--EPKNPANFVMLSNIYG--DLGRWKDVARIKVAM-RDTGFK 530
Y AL E+ +P LS +Y G ++ I +M D GF+
Sbjct: 485 -YGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFE 543
Query: 531 KLPGCSSIEVNEVVMLGCLSRELD 554
LP + V+ + G L + LD
Sbjct: 544 PLPEHYACMVDLLGRAGNLDKALD 567
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 299/546 (54%), Gaps = 53/546 (9%)
Query: 47 LKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIV 106
++ ++ AR + D I + + ++ +G+ E V + +M A P+ +TFP +
Sbjct: 2 VRALSRARSLLDGIPHRRGRAASSSVSGHGAEE----AVAGYVRMLAGGARPDAYTFPSL 57
Query: 107 LKSCVKINALREGEE-----LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
LK+ +H V+K G +N ++LI +Y+ AA V
Sbjct: 58 LKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAA 117
Query: 162 ----DERNVVVWTSMINGY-------ISCG---DIVSARC----------LFELAPERDV 197
V+W ++I+G+ +SC D+V A L +D+
Sbjct: 118 CLATGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDL 177
Query: 198 ILW-------------------NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
+L N +V Y + +M A LF+ M + + SW +++SG
Sbjct: 178 LLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGL 237
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+G V+ + LF+ MPER+ +W +I GY G F + L+ F+ M +V ++ T+
Sbjct: 238 VRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQI-CKVRADEFTM 296
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V+V++ACA+LGAL+ +W +Y G + +V VGNALIDMY+KCG IE A+DVF M
Sbjct: 297 VSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHN 356
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+D TW II GLA++GRG A+ +F+ M A + PD +TF+G+L ACTH GLV++G +
Sbjct: 357 RDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREF 416
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F SM Y+I P + HYGC++D+L RAG+L EA+D + +MP++ ++ IW LL SCRVY
Sbjct: 417 FLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYG 476
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
N E+ ELA ERL EL+P N +++LSN+Y RWKDV RI+ + + G KK PGCS I
Sbjct: 477 NSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMI 536
Query: 539 EVNEVV 544
E+N ++
Sbjct: 537 EMNGII 542
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ + Q+ AR +FD + +++ ++W AM +GY Q R + F M+ +
Sbjct: 233 VISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRAD 292
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
FT V+ +C ++ AL GE + + G + ++FVG ALI++YS +IE A VF
Sbjct: 293 EFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFK 352
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M R+ WT++I G G A +F ++
Sbjct: 353 DMHNRDKFTWTAIILGLAVNGRGEEAIDMFY---------------------------RM 385
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER-----NVFSWNGLIGGYANNGL 274
+ D +++ +L+ + G V++ + F M E V + LI G
Sbjct: 386 LRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGK 445
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
E LD +M + PN T+L++C G
Sbjct: 446 LKEALDTIDKMPMK----PNSTIWGTLLASCRVYG 476
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 298/532 (56%), Gaps = 12/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q+V G +++ ++ A+L+++ + K+F+ +T+ NVVSWNAM G+ N+
Sbjct: 193 VHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDL 252
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF +M P+ TF V K+ + + + +E+ L+ G +N VGTA
Sbjct: 253 YLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTA 312
Query: 141 LIELYSTGKAIEAAYKVFGE--MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI++ S +++ A +F + R W +MI+GY+ G A LF + D+
Sbjct: 313 LIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372
Query: 199 L--------WNTIVS-GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
L +N I + + + + AR + + V N + + YA G +E+ ++
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +R++ SW L+ Y+ + + ++ F M EG + PN T +VL +CA L
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEG-IAPNQFTFSSVLVSCANLC 491
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L++ + VH G + C+ +AL+DMYAKCG + +A VFN + D ++W II+
Sbjct: 492 LLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A HG AL LF M G P+ +TF+ +L AC+H GLVEEGL YF+ M Y +V
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV 611
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P++EHY C+VDLL+R G L +A++F+ RMP+E + ++W LLG+CRV+ NVEL ELA ++
Sbjct: 612 PEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQK 671
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ + +N A +V+LSN Y + G +KD ++ M++ G KK PGCS I VN
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVN 723
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 31/484 (6%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
+ A ++ + A ++FD+++ +N SW + G A+N F +M+ P
Sbjct: 110 HVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFP 169
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ F + +L+ C+ ++++ G +H ++ GF ++ FV TAL+ +Y+ + IE +YKVF
Sbjct: 170 DQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVF 229
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRN 212
M E NVV W +MI G+ S + A LF + P+ + G + R+
Sbjct: 230 NTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGML--RD 287
Query: 213 MIEARKL----FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE--MPERNVFSWNGLI 266
+ +A+++ + + + ++ + G ++E + +F + R WN +I
Sbjct: 288 VNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMI 347
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY +G + L+ F +M + ++ + T +V +A A L L K VH A +G
Sbjct: 348 SGYLRSGFNEKALELFAKM-CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL 406
Query: 327 QGN-VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ N V + NA+ + YAKCG +E+ VFN M+ +DLI+W ++++ + A+ +F
Sbjct: 407 EVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFS 466
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ-----SMAMDYSIVPQIEHYGCMVD 440
M+ G P+ TF +L +C ++ L+E G + MD I +VD
Sbjct: 467 NMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCI------ESALVD 520
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL--EPKNP 498
+ A+ G L +A R+ AD V W ++ + V+ A R+ +L EP N
Sbjct: 521 MYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEP-NA 578
Query: 499 ANFV 502
F+
Sbjct: 579 VTFL 582
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 7/201 (3%)
Query: 208 IDVRNMIEARKLFDQMPKK------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+D R + +A+ + + K ++ N + Y+ D++ RLF++M +RN FS
Sbjct: 79 VDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFS 138
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
W LI G A NGLF + + F M ++G +FP+ +L C L +++ VH
Sbjct: 139 WTVLIAGLAENGLFLDGFEFFCEMQSQG-IFPDQFAYSGILQICIGLDSIELGNMVHAQI 197
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G+ + V AL++MYAK IE++ VFN+M ++++WN +I+G + A
Sbjct: 198 VIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAF 257
Query: 382 SLFHEMKNAGEMPDGITFIGI 402
LF M G PD TFIG+
Sbjct: 258 DLFLRMMGEGVTPDAQTFIGV 278
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 298 IVTVLSACARLGALDFSKWVHVY---AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+V +L C L +K VH + ++++ + V + N + Y+KC I+ A +F+
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLL-NHVAHAYSKCSDIDAACRLFD 129
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M ++ +W +I+GLA +G F EM++ G PD + GIL C + +E
Sbjct: 130 QMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIEL 189
Query: 415 G 415
G
Sbjct: 190 G 190
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 271/490 (55%), Gaps = 42/490 (8%)
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
A P+ TFP +LK+C ++ G + V K GF A++FV A + +S ++ A
Sbjct: 117 ARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLAR 176
Query: 156 KVFGEMDERNVVVWTSMINGYISCG----------------------------------- 180
++F E R+VV W ++I GY+ G
Sbjct: 177 RLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQ 236
Query: 181 --DIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
D+ + L E + V L N ++ Y+ ++ A+ +F+++ K V+SW TM
Sbjct: 237 MGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTM 296
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ G+A G +E+ + LF+EMPER+VF WN L+ GY N E + F M E +V PN
Sbjct: 297 IVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEM-QESKVDPN 355
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ T+V +LSAC++LGAL+ WVH Y + + +V +G +L+DMYAKCG I+ A+ +F
Sbjct: 356 EITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFK 415
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ K+ +TW +I GLA HG A+ F M + G PD ITFIG+L AC H GLV+E
Sbjct: 416 EIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKE 475
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G +F M Y + +++HY CM+DLL RAG L EA V MP++ DAV+W L +C
Sbjct: 476 GRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFAC 535
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R++ N+ L E A +L EL+P + +V+L+N+Y + K +++V MR G +K+PG
Sbjct: 536 RMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPG 595
Query: 535 CSSIEVNEVV 544
CS IE+N VV
Sbjct: 596 CSCIELNGVV 605
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 44/370 (11%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK--LDAMPNCFTFPIV 106
M AR++FD+ ++VVSWN + GY ++ R + LF ++ + P+ T
Sbjct: 171 SMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGA 230
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
+ C ++ L G+ LH V G R + + A++++Y ++E A VF +D + V
Sbjct: 231 VSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTV 290
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
V WT+MI G+ G + AR LF+ PERDV WN +++GY+ + EA LF +M +
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQES 350
Query: 227 DV----ISWNTMLSG-----------------------------------YANNGDVEEC 247
V I+ +LS YA G++++
Sbjct: 351 KVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKA 410
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+F+E+P++N +W +I G AN+G E ++ F+RM+ G + P++ T + VLSAC
Sbjct: 411 ICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLG-LQPDEITFIGVLSACCH 469
Query: 308 LGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWN 365
G + + ++ + E + + + +ID+ + G ++ A + N+M D + W
Sbjct: 470 AGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWG 529
Query: 366 TIISGLAMHG 375
+ MHG
Sbjct: 530 ALFFACRMHG 539
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 120/236 (50%), Gaps = 10/236 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A+L M AR +FD++ +++V WNA+ GY QN+ + + LF +M++ PN
Sbjct: 296 MIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPN 355
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T +L +C ++ AL G +H + ++ ++ +GT+L+++Y+ I+ A +F
Sbjct: 356 EITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFK 415
Query: 160 EMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRNMIE 215
E+ ++N + WT+MI G + G A + + +L + D I + ++S + E
Sbjct: 416 EIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKE 475
Query: 216 ARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
R+ F M +K + ++ M+ G ++E ++L MP + + W L
Sbjct: 476 GRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGAL 531
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L ++ +L P+ T +L ACARL + V + + G+ +V V NA +
Sbjct: 105 LPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVH 164
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM--PDG 396
++ G + A +F+ +D+++WNT+I G G AL LF + G+ PD
Sbjct: 165 FWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDE 224
Query: 397 ITFIGILCACTHMGLVEEG 415
+T IG + C MG +E G
Sbjct: 225 VTMIGAVSGCAQMGDLELG 243
>gi|15220741|ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product [Arabidopsis thaliana]
gi|332195821|gb|AEE33942.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 193/518 (37%), Positives = 287/518 (55%), Gaps = 24/518 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ +++ A +F+K+ ++N VSW+AM G+ QN + VVLF +M D+ P
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL 201
Query: 100 CFTFPIVLKSCVKINALREGEEL--HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
C ++ +K L E + L +G ++ LI Y +EAA +
Sbjct: 202 C----ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL 257
Query: 158 F------------GEMDER---NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
F GE ER NVV W SMI Y+ GD+VSAR LF+ +RD I WNT
Sbjct: 258 FDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNT 317
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
++ GY+ V M +A LF +MP +D SWN M+SGYA+ G+VE + FE+ PE++ SW
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSW 377
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N +I Y N + E +D F RM EG P+ T+ ++LSA L L +H
Sbjct: 378 NSIIAAYEKNKDYKEAVDLFIRMNIEGEK-PDPHTLTSLLSASTGLVNLRLGMQMHQIV- 435
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGAL 381
+V V NALI MY++CG I + +F+ M K ++ITWN +I G A HG + AL
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
+LF MK+ G P ITF+ +L AC H GLV+E + F SM Y I PQ+EHY +V++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
+ G+ EA+ + MP E D +W LL +CR+Y NV LA +A E ++ LEP++ +
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
V+L N+Y D+G W + +++++ M KK G S ++
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 188/404 (46%), Gaps = 81/404 (20%)
Query: 122 LHCLVLKN----------GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
L CL+ N GFRA L ++ +G EA +F +++ RN V W +
Sbjct: 21 LKCLLCANSFSTSVSSSLGFRA---TNKELNQMIRSGYIAEAR-DIFEKLEARNTVTWNT 76
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID---VRNMIEARKLFDQMPKKDV 228
MI+GY+ ++ AR LF++ P+RDV+ WNT++SGY+ +R + EARKLFD+MP +D
Sbjct: 77 MISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDS 136
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
SWNTM+SGYA N + E LFE+MPERN SW+ +I G+ NG + F++M +
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK 196
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWV-------------HVYAEYN------GYQG- 328
+ + + +++ + L + WV VYA YN G +G
Sbjct: 197 -----DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA-YNTLIVGYGQRGQ 250
Query: 329 -----------------------------NVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
NV N++I Y K G + +A +F+ M +
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D I+WNT+I G R A +LF EM N D ++ ++ +G VE YF
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYF 366
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
+ +++ + ++ + EAVD RM IE +
Sbjct: 367 EKTPEKHTV-----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGE 405
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 295/564 (52%), Gaps = 43/564 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I +V SGL+ + ++T A+ + A++MF + ++ SWNA+ ++Q+
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F +MK D PN T+ V+ L EG ++H ++ NGF ++ V T
Sbjct: 188 DWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT 246
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--------- 190
ALI +Y + A +VF +M +R++V W MI Y+ GD A L++
Sbjct: 247 ALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKR 306
Query: 191 -----------------LAPER-------------DVILWNTIVSGYIDVRNMIEARKLF 220
LA R +V + +V+ Y ++ EARK+F
Sbjct: 307 TKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVF 366
Query: 221 DQMPKKDVISWNTMLSGYANNG---DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+ M +D ++W+T++ YA+NG D + +++F+ + R+ SWN +I Y NG
Sbjct: 367 NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVA 426
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
+ F+ M + P+ T + VL ACA LG L K +H + + NV V N LI
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
+MYA+CG +E A +F + K +++W +++ + +GR A AL LF EM G PD +
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T+ IL CTH G +E+G YF MA +++ P +H+ MVDLL R+GRL +A + ++
Sbjct: 547 TYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLES 606
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP E D V W L +CR++ +EL E A ER+ EL+P + A ++ +SNIY G W+ V
Sbjct: 607 MPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKV 666
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVN 541
A ++ M + G KKLPG S IEV+
Sbjct: 667 ASVRKKMEERGLKKLPGLSFIEVD 690
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 146/585 (24%), Positives = 256/585 (43%), Gaps = 87/585 (14%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQN 78
+ ++ S E+ + +I+ + + AR +F+ + +NVVSWNAM YAQN
Sbjct: 29 LHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQN 88
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+VL+ +M + TF VL +C ++L +G E+H V +G + +
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLA 145
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-----ELAP 193
AL+ +Y+ ++ A ++F + R+ W ++I + GD A +F ++ P
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKP 205
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKR 249
+ ++SG+ + E RK+ ++ D++ +++ Y G E +
Sbjct: 206 NSTTYI--NVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEARE 263
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F++M +R++ SWN +IG Y NG F E L+ ++++ EG AT V++L AC+ +
Sbjct: 264 VFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEG-FKRTKATFVSILGACSSVK 322
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + VH + G V V AL++MYAKCG +E A VFN+M +D + W+T+I
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 370 GLAMHGRG----------------------------------AGALSLFHEMKN-AGEMP 394
A +G G A+ +F EM AG P
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKP 442
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMD---------------YSIVPQIEH----- 434
D +TFI +L AC +G + E + ++ Y+ +E
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF 502
Query: 435 ----------YGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVE 481
+ MV ++ GR AEA+D + M +E D V + ++L C ++E
Sbjct: 503 AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLE 562
Query: 482 LAELALERLTELEPKNPA--NFVMLSNIYGDLGRWKDVARIKVAM 524
+ EL P +F + ++ G GR D + +M
Sbjct: 563 QGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESM 607
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 188/387 (48%), Gaps = 11/387 (2%)
Query: 94 LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
+D P+ TF VL SC + EG LH + + F + VG ALI +Y ++
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 154 AYKVFGEMD--ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN-TIVSGYIDV 210
A VF MD +RNVV W +MI Y G A L+ + + + T VS
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 211 RNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
++ + R++ +++ + S+ N +++ YA G V + KR+F+ + R+ SWN +I
Sbjct: 121 SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
++ +G + L FK M + V PN T + V+S + L + +H NG+
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCD--VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
++ V ALI+MY KCG A +VF+ M +D+++WN +I ++G AL L+ +
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
+ G TF+ IL AC+ + + +G S ++ + ++ +V++ A+ G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGS 473
L EA M DAV W+ L+G+
Sbjct: 358 SLEEARKVFNAMK-NRDAVAWSTLIGA 383
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/537 (35%), Positives = 298/537 (55%), Gaps = 10/537 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K ++ V+ G + + +I A + + A +FD++++ +VVSWN+M
Sbjct: 208 LGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSM 267
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NG N F + +F QM L + T VL +C I L G LH +K F
Sbjct: 268 INGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACF 327
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ L+++YS + A +VF +M + +V WTS+I Y+ G A LF+
Sbjct: 328 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDE 387
Query: 192 APER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGD 243
+ D+ +IV ++ + R + + K + S N +++ YA G
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 447
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
VEE + +F ++P +++ SWN +IGGY+ N L E L+ F M + + P+D T+ VL
Sbjct: 448 VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFK--PDDITMACVLP 505
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA L ALD + +H + GY ++ V AL+DMYAKCG++ A +F+ + KDLI+
Sbjct: 506 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS 565
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W +I+G MHG G A+S F+EM+ AG PD +F IL AC+H GL+ EG +F SM
Sbjct: 566 WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMR 625
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ + P++EHY C+VDLLAR G L++A F++ MPI+ D IW LL CR++ +V+LA
Sbjct: 626 NECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLA 685
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
E E + ELEP N +V+L+N+Y + +W++V +++ M+ GFK+ PGCS IEV
Sbjct: 686 EKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEV 742
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 252/509 (49%), Gaps = 37/509 (7%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + LE K +H + ++++G+ + + +++ + RK+FDKI + V
Sbjct: 105 AEKKSLEDGKRVHSV---IISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVF 161
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + + YA+ R V LF +M+KL + NC+TF VLK + ++E + +H V
Sbjct: 162 LWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYV 221
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LK GF +N V +LI Y +E+A+ +F E+ E +VV W SMING + G +
Sbjct: 222 LKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGL 281
Query: 187 CLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGY 238
+F L E D+ +++ ++ N+ R L K ++V+ NT+L Y
Sbjct: 282 EIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMY 341
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+ G++ +F +M + + SW +I Y GL+ + + F M ++G V P+ T+
Sbjct: 342 SKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG-VRPDIYTV 400
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+++ ACA +LD + VH Y NG N+ V NALI+MYAKCG +E A VF+ +
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG--- 415
KD+++WNT+I G + + AL LF +M+ + PD IT +L AC + +++G
Sbjct: 461 KDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREI 519
Query: 416 ------LSYFQSMAMDYSIVPQIEHYGC-MVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
YF + H C +VD+ A+ G L A +P + D + W
Sbjct: 520 HGHILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWT 567
Query: 469 NLLGSCRV--YKNVELAELALERLTELEP 495
++ + + N ++ R+ +EP
Sbjct: 568 VMIAGYGMHGFGNEAISTFNEMRIAGIEP 596
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 211/487 (43%), Gaps = 79/487 (16%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
F T + NA N + + R + L T+ K + N ++ VL+ C + +L
Sbjct: 53 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 110
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
+G+ +H +++ NG + +G L+ + Y
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFM-------------------------------Y 139
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWN 232
++CGD+V R +F+ V LWN ++S Y + N E+ LF +M K V+ ++
Sbjct: 140 VNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 199
Query: 233 TMLSGYANNGDVEECKR-----------------------------------LFEEMPER 257
+L +A G V+ECKR LF+E+ E
Sbjct: 200 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 259
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+V SWN +I G NG L+ F +ML G V + T+V+VL ACA +G L + +
Sbjct: 260 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILG-VEVDLTTLVSVLVACANIGNLSLGRAL 318
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H + + V N L+DMY+KCG + A +VF M +++W +II+ G
Sbjct: 319 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLY 378
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ A+ LF EM++ G PD T I+ AC +++G S + + +
Sbjct: 379 SDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD-VHSYVIKNGMGSNLPVTNA 437
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK- 496
++++ A+ G + EA ++P++ D V W ++G Y L ALE +++ +
Sbjct: 438 LINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG---YSQNLLPNEALELFLDMQKQF 493
Query: 497 NPANFVM 503
P + M
Sbjct: 494 KPDDITM 500
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/507 (37%), Positives = 272/507 (53%), Gaps = 71/507 (14%)
Query: 46 QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT-----VVVLFTQMKKLDAMPNC 100
+L T+ F T ++ + WN + + Q T + +F +M+ P+
Sbjct: 6 RLISSTHPTLHFSHPTLESFL-WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDF 64
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
TFP +L+S + L G +H +L+ G + FV T
Sbjct: 65 HTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQT--------------------- 103
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
S+I+ Y SCG++ G+ AR++F
Sbjct: 104 ----------SLISMYSSCGNL-----------------------GF--------ARQVF 122
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D++P+ D+ SWN++++ G V+ + LF MPERNV SW+ +I GY G + E L
Sbjct: 123 DEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALA 182
Query: 281 AFK--RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
F+ +ML V PN+ T+ VL+AC RLGAL+ KW H Y + G +V +G ALID
Sbjct: 183 LFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALID 242
Query: 339 MYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
MYAKCG +E A VF+++ KD++ W+ +ISGLAMHG + LF +M N G P+ +
Sbjct: 243 MYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAV 302
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
TF+ + CAC H GLV EG Y + M DYSI+P I+HYGCMVDL RAGR+ EA + VK
Sbjct: 303 TFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKS 362
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP+E D ++W LL R++ ++E ELAL++L ELEP N +V+LSN+Y GRW+DV
Sbjct: 363 MPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDV 422
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++ M G KK+PGCS IEV V+
Sbjct: 423 RHVRDLMETMGIKKVPGCSLIEVGGVL 449
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL---DA 96
II A Q + AR +F + ++NV+SW+ M NGY + ++ + LF +M+ L D
Sbjct: 136 IINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDV 195
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
PN FT VL +C ++ AL G+ H + K G ++ +GTALI++Y+ ++E A
Sbjct: 196 RPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATW 255
Query: 157 VFGEM-DERNVVVWTSMING--------------------------------YISC--GD 181
VF + ++V+ W++MI+G + +C G
Sbjct: 256 VFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGG 315
Query: 182 IVS--ARCLFELAPERDVIL----WNTIVSGYIDVRNMIEARKLFDQMP-KKDVISWNTM 234
+VS L + + +I + +V Y + EA + MP + DV+ W +
Sbjct: 316 LVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGAL 375
Query: 235 LSGYANNGDVEEC----KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
LSG +GD+E C K+L E P N ++ L YA G + +V M T G
Sbjct: 376 LSGSRMHGDIETCELALKKLIELEPT-NSGAYVLLSNVYAKRGRWEDVRHVRDLMETMG 433
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 286/507 (56%), Gaps = 30/507 (5%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
K+ A ++FDK+ D++V+SWN+M +GY N + ++ QM L + T VL
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
C K L G+ +H L +K+ F I L+++YS ++ A +VF +M ERNVV
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 168 VWTSMINGYI----SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
WTSMI GY S G I+ + + + + DV+ +I+ ++ + + D +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 224 PKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
++ S N ++ YA G +E +F M +++ SWN ++
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------------- 287
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
G + P+ T+ +L ACA L AL+ K +H Y NGY + V NAL+D+
Sbjct: 288 ---------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 338
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG++ A +F+ + +KDL++W +I+G MHG G A++ F+EM++AG PD ++F
Sbjct: 339 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 398
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
I IL AC+H GL+E+G +F M D++I P++EHY CMVDLL+R G L++A F++ +P
Sbjct: 399 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLP 458
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
I DA IW LL CR+Y ++ELAE ER+ ELEP+N +V+L+NIY + +W++V R
Sbjct: 459 IAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKR 518
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVVML 546
++ + G +K PGCS IE+ V L
Sbjct: 519 MREKIGKKGLRKNPGCSWIEIKGRVNL 545
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 180/377 (47%), Gaps = 38/377 (10%)
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F+ +I + ++E GK E+A ++F ++ +R+V+ W SMI+GY+S G +++
Sbjct: 43 FKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYK 102
Query: 191 ----LAPERDV-----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
L + D+ +L SG + + + + + ++ S NT+L Y+
Sbjct: 103 QMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFS-NTLLDMYSKC 161
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
GD++ R+FE+M ERNV SW +I GY +G + ++M EG V + I ++
Sbjct: 162 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEG-VKLDVVAITSI 220
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACAR G+LD K VH Y + N N+ V NAL+DMYAKCG +E A VF++M KD+
Sbjct: 221 LHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI 280
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
I+WNT++ L PD T IL AC + +E G
Sbjct: 281 ISWNTMVGELK---------------------PDSRTMACILPACASLSALERGKEIHGY 319
Query: 422 MAMD-YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV--YK 478
+ + YS + + +VDL + G L A +P D V W ++ + Y
Sbjct: 320 ILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYG 376
Query: 479 NVELAELALERLTELEP 495
N +A R +EP
Sbjct: 377 NEAIATFNEMRDAGIEP 393
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 148/293 (50%), Gaps = 23/293 (7%)
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE---------------- 246
+VS Y ++ E R++FD M KK+V WN M+S YA GD +E
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 247 ----CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
LF+++ +R+V SWN +I GY +NGL L +K+M+ G + + ATI++VL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVL 120
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
CA+ G L K VH A + ++ + N L+DMY+KCG ++ A+ VF M ++++
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+W ++I+G G GA+ L +M+ G D + IL AC G ++ G +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
+ ++ + ++D+ A+ G + A M ++ D + W ++G +
Sbjct: 241 KAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELK 291
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 170/392 (43%), Gaps = 63/392 (16%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S L K +H + + S E+ + ++ ++ + A ++F+K+ ++NVV
Sbjct: 124 AKSGTLSLGKAVHSL---AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW +M GY ++ + ++L QM+K + +L +C + +L G+++H +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI------NGYISCG 180
N +N+FV AL+++Y+ ++E A VF M ++++ W +M+ + ++C
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC- 299
Query: 181 DIVSARCLFELAPER---------------DVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ C A ER D + N +V Y+ + AR LFD +P
Sbjct: 300 --ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 357
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
KD++SW M++GY + GY N E + F M
Sbjct: 358 KDLVSWTVMIAGYG--------------------------MHGYGN-----EAIATFNEM 386
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKC 343
G + P++ + +++L AC+ G L+ W Y N + + + ++D+ ++
Sbjct: 387 RDAG-IEPDEVSFISILYACSHSGLLE-QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 444
Query: 344 GIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
G + A ++ D W ++ G ++
Sbjct: 445 GNLSKAYKFIETLPIAPDATIWGALLCGCRIY 476
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 256/409 (62%), Gaps = 4/409 (0%)
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML 235
Y G + AR F+ AP RDV L N +++ Y+ + EARK+FD MP +D++SWNTM+
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
GYA G+V + +F+ +R+ FSW+ +I YA + E L+ ++ M + P+
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHA-ASIIPDC 120
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T+V+V+SAC+ LGAL VH + E N + ++ +G ALIDMYAKCG IE+A VF+
Sbjct: 121 ITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDR 180
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
M KD+ TW+++I GLA HG G +LSLF +M + G P+G+TF+G+L ACTH+GLV EG
Sbjct: 181 MPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEG 240
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
YF+SM + I P +EHYGCMVDLL R+G + EA ++ M E D +IW LLG+CR
Sbjct: 241 KKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACR 300
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++KNVE+AE A+ +L L+P ++V+LSNIY W+ VA ++ +R +++PG
Sbjct: 301 IHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGR 360
Query: 536 SSIEVNEVVMLGCLSRELDRKS--IVRAEANMIKLLPQNNH-PLTFIVV 581
SSIE +E + L +S I R M+ L Q + P+T +V+
Sbjct: 361 SSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVL 409
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 42/282 (14%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
++F+ ++ Y + + A KVF M R++V W +MI+GY G++ AR +F+
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----------------------- 230
+RD W++++S Y R EA +L+ +M +I
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 231 ----------------WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
++ YA GD+E +R+F+ MPE++V +W+ +I G AN+GL
Sbjct: 142 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGL 201
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVHVYAEYNGYQGNVCVG 333
E L F +M++EG + PN T V VL AC +G + + K+ E +G + V
Sbjct: 202 GHESLSLFSKMISEG-MKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 260
Query: 334 NALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
++D+ + G +E A + SM D I W ++ +H
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIH 302
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 22 QTQVVTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + V G+ D ++ +I A ++ AR++FD D++ SW++M + YA++
Sbjct: 41 EARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRR 100
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + L+ +M +P+C T V+ +C + AL G E+H V N ++ +GTA
Sbjct: 101 SKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTA 160
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE 194
LI++Y+ IE+A +VF M E++V W+SMI G + G + LF + P
Sbjct: 161 LIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPN 220
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKR 249
+ I ++ + + E +K F M + V + M+ +G VEE ++
Sbjct: 221 GVTFVGVLIACTHVGL--VSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQ 278
Query: 250 LFEEMP-ERNVFSWNGLIGG 268
L M E + W L+G
Sbjct: 279 LIRSMTFEPDTIIWRALLGA 298
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 283/512 (55%), Gaps = 40/512 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + A+ H V+ ++ +++ + + FT+P VL++ + EG + H LK
Sbjct: 15 NLLIRTLARRSSHADVMAVYYDLRERGLVADSFTYPFVLRAIGALQISVEGRKAHAATLK 74
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GFR + + ++L+++Y+ +EAA KVF EM +R VVVW M+ Y+ CG A L
Sbjct: 75 TGFRWDAYTASSLMDMYTMLGRLEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAVAL 134
Query: 189 FE------LAPERDVILW--------------------------------NTIVSGYIDV 210
E L P+R +L N ++ Y+
Sbjct: 135 AEEMERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTGFSLPVANALLDMYVKN 194
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ EA LF++MP ++V+SW T++SGYA G V++ + LF + E+++ W +I Y
Sbjct: 195 GCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYV 254
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G F E L F+ M ++ P+ T+VT+L+ CA LGALD + +H +AE + +
Sbjct: 255 QHGCFIEALSLFRDMQMH-QIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDA 313
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+G ALIDMYAKCG +E +V+VF M+ +D W II GLA +G+ AL LF +M+ +
Sbjct: 314 VLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQAGRALELFEDMERS 373
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD +TFIG+L AC H GLV+EG F++M Y I P++EHY C+V+LL RAG+L E
Sbjct: 374 EAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDE 433
Query: 451 AVDFVKRMPIEADAV-IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
A +K +PI DA+ ++ L+ +C+ NV+++E +R+ + + P +++SN+Y
Sbjct: 434 AEKLIKSIPINKDAMPLFGALITACKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNVYA 493
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW+DV R++ M KK GCS IEV
Sbjct: 494 TASRWEDVVRVRSKMAHPSVKKNAGCSLIEVK 525
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 162/386 (41%), Gaps = 44/386 (11%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ + + + +G Y ++ L ++ ARK+FD++ + VV WN M
Sbjct: 59 LQISVEGRKAHAATLKTGFRWDAYTASSLMDMYTMLGRLEAARKVFDEMPQRAVVVWNMM 118
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NG 130
Y + + V L +M++ P+ T L +C + L G ++H + G
Sbjct: 119 LRCYVRCGRNTEAVALAEEMERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTG 178
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F ++ V AL+++Y +E A +F +M RNVV WT++++GY G + AR LF
Sbjct: 179 F--SLPVANALLDMYVKNGCLEEAVNLFEKMPSRNVVSWTTLVSGYAFAGQVDKARLLFH 236
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-------------------------- 224
E+D+I+W +++ Y+ IEA LF M
Sbjct: 237 QCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQ 296
Query: 225 -------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
K D + ++ YA G VE+ +FE M R+ +W +I G A
Sbjct: 297 GQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLAT 356
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNV 330
NG L+ F+ M P+ T + VLSAC G +D K E + V
Sbjct: 357 NGQAGRALELFEDM-ERSEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRV 415
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSM 356
+ L+++ + G ++ A + S+
Sbjct: 416 EHYSCLVNLLGRAGQLDEAEKLIKSI 441
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ A Q+ AR +F + T+++++ W AM N Y Q+ + LF M+ P+
Sbjct: 218 LVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPD 277
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
FT +L C + AL +G+ +H + + +GTALI++Y+ +E + +VF
Sbjct: 278 RFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFE 337
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNMIE 215
M+ R+ WT++I G + G A LFE + D + + ++S + E
Sbjct: 338 RMEGRDTKAWTAIICGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLSACCHGGLVDE 397
Query: 216 ARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
RK F M + V ++ +++ G ++E ++L + +P
Sbjct: 398 GRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDEAEKLIKSIP 442
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/517 (37%), Positives = 280/517 (54%), Gaps = 24/517 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ +M A K+F+ + + N VS+NA+ G+ N + V F M + D+
Sbjct: 140 VISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSL 199
Query: 100 CFTFPIVLKSC---VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
C ++++ + LRE C +G + LI Y +E A +
Sbjct: 200 CALISGLVRNGELDLAAGILRE-----CGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARR 254
Query: 157 VFGEMD-------------ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
+F + RNVV W SM+ Y+ GDIV AR LF+ ERD WNT+
Sbjct: 255 LFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMVERDNCSWNTL 314
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
+S Y+ + NM EA KLF +MP DV+SWN+++SG A GD+ K FE MP +N+ SWN
Sbjct: 315 ISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWN 374
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I GY N + + F M EG P+ T+ +V+S L L K +H
Sbjct: 375 TIIAGYEKNEDYKGAIKLFSEMQLEGER-PDKHTLSSVISVSTGLVDLYLGKQLHQLVT- 432
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGAGALS 382
+ + N+LI MY++CG I +A VFN + KD+ITWN +I G A HG A AL
Sbjct: 433 KTVLPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGSAAEALE 492
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF MK P ITFI +L AC H GLVEEG F+SM DY I P++EH+ +VD+L
Sbjct: 493 LFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQFKSMINDYGIEPRVEHFASLVDIL 552
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
R G+L EA+D + MP + D +W LLG+CRV+ NVELA +A + L LEP++ A +V
Sbjct: 553 GRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHNNVELALVAADALIRLEPESSAPYV 612
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+L N+Y +LG+W D ++V M + KK G S ++
Sbjct: 613 LLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSWVD 649
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 174/420 (41%), Gaps = 85/420 (20%)
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD---IVSARCL 188
R + ++I Y + I A ++F EM R+VV W +++GY SC + R L
Sbjct: 66 RRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYFSCCGSRFVEEGRRL 125
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
FEL P+RD + WNT++SGY M +A KLF+ MP+ + +S+N +++G+ NGDVE
Sbjct: 126 FELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAV 185
Query: 249 RLFEEMPERN-------------------------------------VFSWNGLIGGYAN 271
F MPE + V ++N LI GY
Sbjct: 186 GFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQ 245
Query: 272 NG------LFFEVLDAFKRMLTEG-RVFPNDATIVTVLSAC-ARLGALDFSKWVHVYAEY 323
G F+V+ EG R F + + C + G + F++ +
Sbjct: 246 RGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRM-- 303
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG-------- 375
+ + C N LI Y + +E A +F M + D+++WN+IISGLA G
Sbjct: 304 --VERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDF 361
Query: 376 -----------------------RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
GA+ LF EM+ GE PD T ++ T GLV
Sbjct: 362 FERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVST--GLV 419
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ L + +++P ++ + +R G + +A + + D + W ++G
Sbjct: 420 DLYLGKQLHQLVTKTVLPDSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIG 479
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 173/382 (45%), Gaps = 61/382 (15%)
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
++ I G I AR LF+ RD + WN+++SGY+ R + AR+LFD+MP++DV+SWN
Sbjct: 45 LSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWN 104
Query: 233 TMLSGY---ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM---- 285
++SGY + VEE +RLFE MP+R+ SWN +I GYA NG + L F M
Sbjct: 105 LIVSGYFSCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHN 164
Query: 286 -----------LTEG---------RVFP--NDATIVTVLSACARLGALDFSKWVHVYAEY 323
L G R P + ++ ++S R G LD + + +
Sbjct: 165 AVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGI-LRECG 223
Query: 324 NGYQGN---VCVGNALIDMYAKCGIIENAVDVFNSMDT-------------KDLITWNTI 367
NG G V N LI Y + G +E A +F+ + +++++WN++
Sbjct: 224 NGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSM 283
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+ G A LF M D ++ ++ + +EE F+ M
Sbjct: 284 MMCYVKAGDIVFARELFDRMVER----DNCSWNTLISCYVQISNMEEASKLFREMP---- 335
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
P + + ++ LA+ G L A DF +RMP + + W ++ Y+ E + A+
Sbjct: 336 -SPDVLSWNSIISGLAQKGDLNLAKDFFERMP-HKNLISWNTIIAG---YEKNEDYKGAI 390
Query: 488 ERLTE--LEPKNPANFVMLSNI 507
+ +E LE + P + S I
Sbjct: 391 KLFSEMQLEGERPDKHTLSSVI 412
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 228/349 (65%), Gaps = 1/349 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D + ++V Y R++ +AR +F +M +DV++WN M++GY GD+ + LF+ MP
Sbjct: 113 DTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMP 172
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERNV SW +IGGYA E ++ F+RM EG + P+ +++VLSAC LGA+D +
Sbjct: 173 ERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEG-IEPDGVALLSVLSACGDLGAVDLGE 231
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
WVH + G + + + N++IDMY KCG IE AV+VF M+ K ++TW T+I+G A+HG
Sbjct: 232 WVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG 291
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G A+ +F M+ P+ +TF+ IL AC+H+GL + G YF M Y I PQ+EHY
Sbjct: 292 LGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHY 351
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GCMVDLL RAG L EA D VK MP++A+A IW LL + R + + +L E AL L ELEP
Sbjct: 352 GCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLIELEP 411
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N N+++LSNI+ + RW DV++++ AM++ G + +PG SSIEV+ +V
Sbjct: 412 SNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSIEVDGMV 460
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 43/299 (14%)
Query: 119 GEELHCLVLKNGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
G +LH L+L+ G A + V +L++LY T + + A VF EM R+VV W MI GY+
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYV 156
Query: 178 SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP------------- 224
GD+ AR LF+ PER+V+ W T++ GY +R EA ++F +M
Sbjct: 157 KAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLS 216
Query: 225 --------------------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
++++ N+++ Y G +E+ +FE M E++
Sbjct: 217 VLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 276
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW-V 317
V +W LI G+A +GL + ++ F+RM E + PND T + +LSAC+ +G D +W
Sbjct: 277 VVTWTTLIAGFALHGLGLQAVEMFRRMEREN-MAPNDVTFLAILSACSHVGLTDLGRWYF 335
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
++ + V ++D+ + G ++ A D+ M K + W +++ HG
Sbjct: 336 NIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHG 394
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I + + +AR++FD + ++NVVSW + GYAQ V +F +M+ P+
Sbjct: 151 MIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPD 210
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
VL +C + A+ GE +H V++ G R I + ++I++Y IE A +VF
Sbjct: 211 GVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFE 270
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNM 213
M+E++VV WT++I G+ G + A +F +AP L ++ + ++
Sbjct: 271 GMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDL 330
Query: 214 IEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
R F+ M K V + M+ G ++E + L ++MP + N W L+
Sbjct: 331 --GRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLA 388
Query: 268 GYANNG 273
+G
Sbjct: 389 ASRTHG 394
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
VV GL + + II + + A ++F+ + +++VV+W + G+A +
Sbjct: 237 VVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQA 296
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE-ELHCLVLKNGFRANIFVGTALIE 143
V +F +M++ + PN TF +L +C + G + +V + + + +++
Sbjct: 297 VEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVD 356
Query: 144 LYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
L ++ A + +M + N +W +++ + GD
Sbjct: 357 LLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGD 395
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 312/637 (48%), Gaps = 110/637 (17%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H I Q++ SGL+ ++ +I C++ ++ AR +FDK+ +N+++W++M + Y+
Sbjct: 67 HYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYS 126
Query: 77 QNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
Q + +++F + +K PN F V+++C ++ + +G +LH V+++GF ++
Sbjct: 127 QQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 186
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG--------------- 180
+VGT+LI+ YS IE A VF ++ E+ V WT++I GY CG
Sbjct: 187 YVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRET 246
Query: 181 ----------DIVSARCLFEL--------------APERDVILWNTIVSGYIDVRNMIEA 216
++SA + E E DV + N ++ Y +
Sbjct: 247 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 306
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP--------------------- 255
RKLFDQM K++ISW TM+SGY N E +LF EM
Sbjct: 307 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 366
Query: 256 ------------------ERNVFSWNGLIGGYANNGLFFEVLDAFKRM----------LT 287
E + F NGLI YA + L + F M +
Sbjct: 367 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 426
Query: 288 EG-----------------RVF---PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
EG RV PN+ T +++A + L +L + H G
Sbjct: 427 EGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 486
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
V NAL+DMYAKCG IE A +FNS +D++ WN++IS A HG AL +F EM
Sbjct: 487 FCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREM 546
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
G P+ +TF+ +L AC+H G VE+GL++F SM + I P EHY C+V LL R+G+
Sbjct: 547 MKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGK 605
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L EA +F+++MPIE A++W +LL +CR+ NVEL + A E +PK+ ++++LSNI
Sbjct: 606 LFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNI 665
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ G W DV +++ M + K PG S IEVN V
Sbjct: 666 FASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKV 702
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 211/482 (43%), Gaps = 29/482 (6%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P F +L+ + N + + +H ++ +G +++ F+ LI + S ++ A V
Sbjct: 47 PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER------DVILWNTIVS----GY 207
F +M +N++ W+SM++ Y G A +F + + +L + I + G
Sbjct: 107 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 166
Query: 208 IDVRNMIEA---RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
++ + R FDQ DV +++ Y+ NG++EE + +F+++ E+ +W
Sbjct: 167 VEKGAQLHGFVVRSGFDQ----DVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTT 222
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GY G L+ F +M E V P+ + +VLSAC+ L L+ K +H Y
Sbjct: 223 IIAGYTKCGRSAVSLELFAQM-RETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 281
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G + +V V N LID Y KC ++ +F+ M K++I+W T+ISG + A+ LF
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH----YGCMVD 440
EM G PDG +L +C +E+G Y+I +E ++D
Sbjct: 342 GEMNRLGWKPDGFACTSVLTSCGSREALEQG-----RQVHAYTIKANLESDEFVKNGLID 396
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
+ A++ L +A M + A + G K E EL E L+ N
Sbjct: 397 MYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFT 456
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCL--SRELDRKSI 558
F L +L + + + G P ++ V+ G + +R++ SI
Sbjct: 457 FAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSI 516
Query: 559 VR 560
R
Sbjct: 517 WR 518
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
+ L + +H Q Q+V GL+ ++T ++ A+ + ARKMF+ ++VV W
Sbjct: 464 ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCW 523
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M + +AQ+ + +F +M K PN TF VL +C + +G +
Sbjct: 524 NSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG 583
Query: 129 NGFRANIFVGTALIELYS-TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G + ++ L +GK EA + E +VW S+++ G++ +
Sbjct: 584 FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKY 643
Query: 188 LFELAPERD-------VILWNTIVSG--YIDVRNMIEARKLFDQMPKKDVI 229
E+A D ++L N S + DV +K+ D+M +V+
Sbjct: 644 AAEMAISTDPKDSGSYILLSNIFASKGMWADV------KKVRDRMDSSEVV 688
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 302/591 (51%), Gaps = 87/591 (14%)
Query: 40 IITACAQLKQMTYARKMFD--KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM 97
+ITA L + R++F+ + ++ V +NAM GYA N + + LF M++ D
Sbjct: 85 LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144
Query: 98 PNCFTFPIVLKSCVK-INALREGEELHCLVLKNGFRA-NIFVGTALIELYSTG------- 148
P+ FTF VL + V + ++ ++HC V+K G + V AL+ +Y
Sbjct: 145 PDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIP 204
Query: 149 -KAIEAAYKVFGEMDERNVVVWTSMI-------------------------------NGY 176
A+ +A K+F EM +R+ + WT+MI +GY
Sbjct: 205 CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGY 264
Query: 177 ISCGDIVSA----RCLFELAPERDVILWNTIVSG-------------------------- 206
+ CG A R + L + D I + TI+S
Sbjct: 265 VHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNH 324
Query: 207 -------------YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
Y + EARK+F MP +++I+WN +LSGY N G +EE K FEE
Sbjct: 325 SFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEE 384
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP +N+ + +I G A NG E L FK+M +G P D L+AC+ LGAL+
Sbjct: 385 MPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDG-FEPCDFAFAGALTACSVLGALEN 443
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ +H + GY+ ++ VGNA+I MYAKCG++E A VF +M + DL++WN++I+ L
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G A+ LF +M G PD ITF+ +L AC+H GLVE+G YF SM Y I P +
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCED 563
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY MVDL RAG + A + MP + A +W LL CR++ N++L A E+L +L
Sbjct: 564 HYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKL 623
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
P+N +V+LSNIY D+GRW DVA+++ MRD +K P CS IEV V
Sbjct: 624 MPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKV 674
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + LH Q+V G E S + +I+ A+ + A +F + ++VSWN+M
Sbjct: 441 LENGRQLH---AQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSM 497
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-G 130
Q+ + LF QM K P+ TF VL +C + +G +L++ G
Sbjct: 498 IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGD----IVSA 185
+++L+ A V M + VW +++ G G+ I +A
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617
Query: 186 RCLFELAPERD---VILWNTIVSGYIDV---RNMIEARKLF-DQMPKKD-VISW 231
LF+L P+ D V+L N Y DV ++ + RKL DQ +K+ SW
Sbjct: 618 EQLFKLMPQNDGTYVLLSNI----YADVGRWNDVAKVRKLMRDQAVRKEPACSW 667
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 287/515 (55%), Gaps = 15/515 (2%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ A+ + ARK+FD+I D+NVVSW +M +G QN + +VLF +M++
Sbjct: 163 FVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQE 222
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+P+ +T VL +C + +L +G +H V+K+G +N F+ A++++Y E A
Sbjct: 223 SILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDA 282
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYI 208
+VF E+ ++V+WT+MI GY G + A LF + P I T++S
Sbjct: 283 RQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTI--ATVLSASA 340
Query: 209 DVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
+RN+ R + K DV+ N ++ YA + + K +F + ++V +WN
Sbjct: 341 QLRNLSLGRSIHGISVKLGAVENDVV-MNALVDMYAKCKALSDAKGIFGRVLNKDVVTWN 399
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
LI GYA N + + L F M +G + P+ ++V LSAC LG L K H YA
Sbjct: 400 SLIAGYAENDMGSDALMLFSHMRVQGSL-PDAISVVNALSACVCLGDLLIGKCFHTYAVK 458
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ + N+ V AL+++Y KC + +A VF+ M+ ++ +TW +I G M G AG++ L
Sbjct: 459 HAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDL 518
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F+EM P+ F IL C+H G+V G F+SMA ++I P ++HY CMVD+LA
Sbjct: 519 FNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLA 578
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG L EA++F+++MP++AD IW L C+++ +E AE A+ R+ L P P VM
Sbjct: 579 RAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVM 638
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+SN+Y GRW I+ M++ G KLPGCSS+
Sbjct: 639 MSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSV 673
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 24/377 (6%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ I V+ GL + +IT ++ + + AR++FD+++ ++V W M G
Sbjct: 244 LHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVG 303
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y QN ++LF K + +PN T VL + ++ L G +H + +K G N
Sbjct: 304 YTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEN 363
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---- 190
V AL+++Y+ KA+ A +FG + ++VV W S+I GY A LF
Sbjct: 364 DVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRV 423
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDVE 245
D I +S + + +++ K F K N +L+ Y D+
Sbjct: 424 QGSLPDAISVVNALSACVCLGDLLIG-KCFHTYAVKHAFMSNIYVNTALLNLYNKCADLP 482
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+R+F EM +RN +W +IGGY G +D F ML + + PN+A ++LS C
Sbjct: 483 SAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDN-IQPNEAVFTSILSTC 541
Query: 306 ARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
+ G + F H + + C ++D+ A+ G +E A++ M +
Sbjct: 542 SHTGMVTVGKKCFESMAHYFNITPSMKHYAC----MVDVLARAGNLEEALEFIQKMPMQA 597
Query: 360 DLITWNTIISGLAMHGR 376
D W + G +H R
Sbjct: 598 DTSIWQAFLHGCKLHSR 614
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 174/379 (45%), Gaps = 21/379 (5%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L +C + +LR LH +L +G + T L+ Y+ + +A +V E +
Sbjct: 34 LLPACTTLPSLRA---LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPD 90
Query: 166 VVVWTSMINGYISCGDIVSA---------RCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
+ + + + G A RC E + DV++ + + + +
Sbjct: 91 AYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAE---QEDVVVLSLALKAAVRSADFGYG 147
Query: 217 RKLFDQMPKK---DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
R+L + K D+ N ++ YA GD++ +++F+ +P+RNV SW ++ G NG
Sbjct: 148 RRLHCDVVKAGGGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNG 207
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L E L F M E + P++ T+ +VL AC LG+L + +H +G N +
Sbjct: 208 LAKEGLVLFNEMRQES-ILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFIT 266
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
A++DMY KCG E+A VF+ + DL+ W T+I G +G AL LF + K +
Sbjct: 267 AAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIV 326
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
P+ +T +L A + + G S +++ V +VD+ A+ L++A
Sbjct: 327 PNSVTIATVLSASAQLRNLSLGRS-IHGISVKLGAVENDVVMNALVDMYAKCKALSDAKG 385
Query: 454 FVKRMPIEADAVIWANLLG 472
R+ + D V W +L+
Sbjct: 386 IFGRV-LNKDVVTWNSLIA 403
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 137/277 (49%), Gaps = 17/277 (6%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ A L + +H I ++ G ++D + ++ A+ K ++ A+ +F ++ ++
Sbjct: 337 SASAQLRNLSLGRSIHGISVKL---GAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNK 393
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VV+WN++ GYA+N+ ++LF+ M+ ++P+ + L +CV + L G+ H
Sbjct: 394 DVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFH 453
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K+ F +NI+V TAL+ LY+ + +A +VF EM++RN V W +MI GY GD
Sbjct: 454 TYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSA 513
Query: 184 SARCLF------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWN 232
+ LF + P V + +I+S + +K F+ M + +
Sbjct: 514 GSIDLFNEMLKDNIQPNEAV--FTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYA 571
Query: 233 TMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
M+ A G++EE ++MP + + W + G
Sbjct: 572 CMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHG 608
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 311/587 (52%), Gaps = 47/587 (8%)
Query: 17 HLHQIQTQVVTSGL--EKSDYITPRI----ITACAQLKQMTYARKMFDKITDQNVVSWNA 70
HL QI Q++ S E ++ + ++ T + + YA +F +I + + N
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQ 90
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ +++ F + L+ ++ ++A + F+FP +LK+ K++A G E+H L K
Sbjct: 91 LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF + F+ T LI +Y++ + I A +F +M + V W +I+GY G A LF
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 190 E------LAPER---------------------------------DVILWNTIVSGYIDV 210
E + P+ D L +++ Y +
Sbjct: 211 EDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANC 270
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
M ARK++D + K +I MLSGYA G V++ + +F++M ER++ W+ +I GYA
Sbjct: 271 GAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYA 330
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+ E L F ML + R P+ T+++V+SAC+ +GAL + W+H Y + +G+ +
Sbjct: 331 ESDQPQEALKLFDEML-QKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRAL 389
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V NALIDMYAKCG + A +VF +M K++I+W+++I+ AMHG A+ LF MK
Sbjct: 390 SVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEV 449
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
P+G+TFIG+L AC H GLVEEG F SM ++ I P EHYGCMVDL RA L +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRK 509
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A++ ++ MP + +IW +L+ +C+V+ EL E A +RL ELEP + V+LSNIY
Sbjct: 510 AIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAK 569
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKS 557
RW DV I+ +M G K S IE+N V + ++ ++S
Sbjct: 570 EKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQS 616
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARK----------- 55
H+ L + +H+ V +G ++ +I A M ARK
Sbjct: 233 GHAGNLSYGRTIHEF---VKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLI 289
Query: 56 --------------------MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
+FD++ ++++V W+AM +GYA+++ + + LF +M +
Sbjct: 290 VSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKR 349
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
++P+ T V+ +C + AL + +H V ++GF + V ALI++Y+ + A
Sbjct: 350 SVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAR 409
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSG 206
+VF M +NV+ W+SMIN + G+ SA LF E ++ +L+ +G
Sbjct: 410 EVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAG 469
Query: 207 YIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVF 260
++ E KLF M + IS + M+ Y + + L E MP NV
Sbjct: 470 LVE-----EGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVI 524
Query: 261 SWNGL-----IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
W L + G A G F A KR+L + P+ + VLS
Sbjct: 525 IWGSLMSACQVHGEAELGEF-----AAKRLL---ELEPDHDGALVVLS 564
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/547 (36%), Positives = 295/547 (53%), Gaps = 81/547 (14%)
Query: 13 ETTKHLHQIQTQVVTSG-----LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
+TT+HL QI + +G L ++ + + +T Q +++ YARK F +I N S
Sbjct: 26 KTTRHLKQIHAHFIKTGQIHHPLAAAELL--KFLTLSTQ-REIKYARKFFSQIHHPNCFS 82
Query: 68 WNAMFNGYAQNE----FHRT---VVVLFTQMKKLDAM--PNCFTFPIVLKSCVKINALRE 118
WN + A ++ FH ++ F+ M D + PN FTFP VLK+C K+ + E
Sbjct: 83 WNTIIRALADSDDDDLFHVNSLEALLYFSHMLT-DGLVEPNKFTFPCVLKACAKLARIEE 141
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
G++LH V+K G ++ FV + L+ +Y +
Sbjct: 142 GKQLHGFVVKLGLVSDEFVRSNLVRVY-------------------------------VM 170
Query: 179 CGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
CG + A LF + T + G +V+ WN M+ GY
Sbjct: 171 CGAMKDAHVLF----------YQTRLEG--------------------NVVLWNVMIDGY 200
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
GD+ + LF+ MP ++V SWN +I G A NG F E ++ F M G V PN T+
Sbjct: 201 VRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQL-GDVPPNYVTL 259
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-D 357
V+VL A +RLGA++ KWVH++AE N + + +G+ALIDMY+KCG I+ AV VF + +
Sbjct: 260 VSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRN 319
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K+ ITW+ II GLAMHGR AL F M+ AG P + +IG+L AC+H GLVEEG S
Sbjct: 320 KKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRS 379
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+ M ++P+IEHYGCMVDLL RAG L EA + MP++ D VI LLG+C+++
Sbjct: 380 IYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMH 439
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
N+E+ E + L P + ++V LSN++ G W+ V ++++ M++ +K PGCS
Sbjct: 440 GNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSW 499
Query: 538 IEVNEVV 544
IE++ V+
Sbjct: 500 IELDGVI 506
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 301/540 (55%), Gaps = 13/540 (2%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL+Q + ++TSGL + ++ + K + Y +FD++ + WN +
Sbjct: 20 TFDHLNQTTSILITSGLAHHTFFLSDLLRSAT--KDLGYTLLLFDRLATPYIFLWNTIVR 77
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
++ + + V+V +++++ +P+ TFP++LK+ K+ + + ++K G
Sbjct: 78 SFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAHIVKFGLDF 136
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-RCLFELA 192
+ FV +L+ ++ ++ + ++F E +++VV WT++ING + G V A C E+
Sbjct: 137 DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMR 196
Query: 193 P---ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TMLSGYANNGDV 244
E D + +++ +R++ R + + + W+ ++ Y+ G
Sbjct: 197 SSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYC 256
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
++ ++F EMP RN+ SW LI GY + E L F+ M+ EG + PN +T+ + L+A
Sbjct: 257 DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEG-IEPNQSTVTSALTA 315
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
CA+LG+LD +W+H Y + + N +G AL+DMY+KCG ++ A+ VF + KD+ W
Sbjct: 316 CAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPW 375
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+I+GLAM G +L+LF +M + P+G+TF+G+L AC H GLV+EGL F+ M
Sbjct: 376 TAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMIC 435
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
DY + P ++HYGCMVDLL RAGRL EA+ F++ MP+E +W L C ++K EL E
Sbjct: 436 DYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGE 495
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +L+P + +++L+N+Y +W+ A ++ M+ G K P CS IEVN V+
Sbjct: 496 HIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVI 555
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/585 (33%), Positives = 299/585 (51%), Gaps = 50/585 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++V S + +++ ++I+ ++ + A +F KI +N+ SWNA+F Y +
Sbjct: 24 QLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHN 83
Query: 80 FHRTVVVLFTQM---KKLDAMPNCFTFPIVLKSCVKINALRE-GEELHCLVLKNGFRANI 135
H ++ LF+ + D P+ FT LK+ + + +E+H +L+ G +I
Sbjct: 84 MHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDI 143
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ 189
FV ALI YS + A +F M ER+ V W +M+ GY G + LF
Sbjct: 144 FVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSS 203
Query: 190 -ELAP---------------------------------ERDVILWNTIVSGYIDVRNMIE 215
E+ P + DV LWN ++ Y +
Sbjct: 204 VEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDY 263
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR+LF++MP+KD I++ +M+SGY +G V + LF E + +WN +I G N
Sbjct: 264 ARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQ 323
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+D F+ M + G PN T+ ++L + L K +H YA N Y N+ V A
Sbjct: 324 EGAVDIFRAMQSHG-CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATA 382
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
+ID YAKCG + A VF+ + + LI W +IIS A+HG ALSLF+EM G PD
Sbjct: 383 IIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPD 442
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
+TF +L AC H G ++E F + +Y I P +EHY CMV +L+RAG+L++AV+F+
Sbjct: 443 QVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFI 502
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+MP+E A +W LL V +VEL + +RL E+EP+N N+V+++N+Y GRWK
Sbjct: 503 SKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWK 562
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVR 560
D I+ M++ KK+PG S IE + G + R R S VR
Sbjct: 563 DADTIRDLMKEVRLKKIPGNSWIETS-----GGMQRFCXRHSSVR 602
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 105/384 (27%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+++ C R G++LH ++ + + F+G+ LI YS +I AY VFG++ +N
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 166 VVVWTSMINGYISCGDIVSARCLF---------ELAPER--------------------- 195
+ W ++ Y LF ++ P+R
Sbjct: 69 IFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAK 128
Query: 196 -------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
D+ + N +++ Y ++ AR +FD+MP++D +SWN ML+GY+ G
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGG 188
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
EECK L F+ ML+ V PN T V+VL
Sbjct: 189 SYEECKEL-------------------------------FRVMLSSVEVKPNALTAVSVL 217
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD-- 360
ACA+ L F VH + + + +V + NA+I +YAKCGI++ A ++F M KD
Sbjct: 218 QACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGI 277
Query: 361 -----------------------------LITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
L TWN +ISGL + R GA+ +F M++ G
Sbjct: 278 TYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHG 337
Query: 392 EMPDGITFIGILCACTHMGLVEEG 415
P+ +T IL +H ++ G
Sbjct: 338 CRPNTVTLASILPVFSHFSTLKGG 361
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
T K +I + + +++ Y+ II + A+ + A+ +FD+I +++++W +
Sbjct: 354 HFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTS 413
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKN 129
+ + YA + + LF +M P+ TF VL +C L E ++ + L+ +
Sbjct: 414 IISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEY 473
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARC- 187
G + + ++ + S + A + +M E VW +++NG GD+ +
Sbjct: 474 GIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYV 533
Query: 188 ---LFELAPE 194
LFE+ PE
Sbjct: 534 FDRLFEIEPE 543
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 313/641 (48%), Gaps = 118/641 (18%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS------------- 67
+ ++ SG + + R++ + + YAR++F++I + + ++
Sbjct: 35 VHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGN 94
Query: 68 --------------------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
+NAM GYA N + + LF M++ D P+ FTF VL
Sbjct: 95 LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154
Query: 108 KSCVK-INALREGEELHCLVLKNGFRA-NIFVGTALIELYS--------TGKAIEAAYKV 157
+ V + ++ ++HC V+K G + V AL+ +Y + A+ +A K+
Sbjct: 155 SALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKL 214
Query: 158 FGEMDERNVVVWTSMI-------------------------------NGYISCGDIVSA- 185
F EM +R+ + WT+MI +GY+ CG A
Sbjct: 215 FDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEAL 274
Query: 186 ---RCLFELAPERDVILWNTIVSG------------------------------------ 206
R + L + D I + TI+S
Sbjct: 275 TLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNAL 334
Query: 207 ---YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
Y + EARK+F MP +++I+WN +LSGY N G +EE K FEEMP +N+ +
Sbjct: 335 ITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLT 394
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G A NG E L FK+M +G P D L+AC+ LGAL+ + +H +
Sbjct: 395 VMISGLAQNGFGDEGLKLFKQMRLDG-FEPCDFAFAGALTACSVLGALENGRQLHAQLVH 453
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
GY+ ++ VGNA+I MYAKCG++E A VF +M + DL++WN++I+ L HG G A+ L
Sbjct: 454 LGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIEL 513
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F +M G PD ITF+ +L AC+H GLVE+G YF SM Y I P +HY MVDL
Sbjct: 514 FDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFC 573
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG + A + MP + A +W LL CR++ N++L A E+L +L P+N +V+
Sbjct: 574 RAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVL 633
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LSNIY D+GRW +VA+++ MRD +K P CS IEV V
Sbjct: 634 LSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKV 674
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + LH Q+V G E S + +I+ A+ + A +F + ++VSWN+M
Sbjct: 441 LENGRQLH---AQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSM 497
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-G 130
Q+ + LF QM K P+ TF VL +C + +G +L++ G
Sbjct: 498 IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGD----IVSA 185
+++L+ A V M + VW +++ G G+ I +A
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617
Query: 186 RCLFELAPERD---VILWNTIVSGYIDV---RNMIEARKLF-DQMPKKD-VISW 231
LF+L P+ D V+L N Y DV + + RKL DQ +K+ SW
Sbjct: 618 EQLFKLMPQNDGTYVLLSNI----YADVGRWNEVAKVRKLMRDQAVRKEPACSW 667
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/538 (34%), Positives = 306/538 (56%), Gaps = 10/538 (1%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L T ++ Q+V G S ++ ++ A+ +++ +R++FD+I D+NVV W +
Sbjct: 150 ELRETDEGRKLHCQIVKVGSPDS-FVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTS 208
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M GY QN+ + +VLF +M++ N +T ++ +C K+ AL +G+ +H V+K+G
Sbjct: 209 MIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSG 268
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F N F+ T L++LY I A+ VF E+ ++V WT+MI GY G A LF
Sbjct: 269 FDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFT 328
Query: 191 LAPERDV----ILWNTIVSGYIDVRNMIEARK---LFDQMPKKDVISWNTMLSGYANNGD 243
+D+ + ++++S ++ R L ++ +D N ++ YA
Sbjct: 329 DERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENALVDMYAKCHM 388
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ + + +FE + +++V +WN +I GY NG +E L+ F +M ++ V+P+ T+V+VLS
Sbjct: 389 IGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS-VYPDAITLVSVLS 447
Query: 304 ACARLGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA +GA +H YA G G+V VG AL++ YAKCG E+A +F+ M K+ I
Sbjct: 448 ACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTI 507
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TW+ +I G + G + +L LF +M P+ + F IL AC+H G++ EG YF +M
Sbjct: 508 TWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTM 567
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y+ VP ++HY CMVDLLARAGRL EA+DF++++PI+ D + L CR++ +L
Sbjct: 568 CQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDL 627
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
E+A+ R+ EL P +V++SN+Y GRW ++ M+ G KLPG S +++
Sbjct: 628 GEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDI 685
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 238/473 (50%), Gaps = 21/473 (4%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T L +I +V GL + ++++ + AR MFD+I + ++ SW M
Sbjct: 50 KTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMI 109
Query: 73 NGYAQNEFHRTVVVLF-TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
Y N+ + +V + T+++K + F IVLK+C ++ EG +LHC ++K G
Sbjct: 110 RWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG- 168
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-- 189
+ FV T L+++Y+ + +E + +VF E+ +RNVV WTSMI GY+ + LF
Sbjct: 169 SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNR 228
Query: 190 --ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK--DVISW--NTMLSGYANNGD 243
E E + ++V+ + + + + + + K D+ S+ +L Y GD
Sbjct: 229 MREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGD 288
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR---VFPNDATIVT 300
+ + +F+E+ ++ SW +I GYA G E L ++ T+ R + PN T +
Sbjct: 289 IRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREAL----KLFTDERWKDLLPNTVTTSS 344
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
VLSACA+ G+L+ + VH G + + NAL+DMYAKC +I +A VF ++ KD
Sbjct: 345 VLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFETVFDKD 403
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+I WN+IISG +G AL LF +M++ PD IT + +L AC +G G S
Sbjct: 404 VIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVG-SSLH 462
Query: 421 SMAMDYSIVPQIEHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
A+ ++ + G +++ A+ G A M E + + W+ ++G
Sbjct: 463 GYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMG-EKNTITWSAMIG 514
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 293/541 (54%), Gaps = 38/541 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q K L + ++V ++ + +++ A A + AR +FD I ++NV+ +N
Sbjct: 43 DQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYN 102
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M Y N + +++F M P+ +T+P VLK+C + LR G +LH V K
Sbjct: 103 VMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKV 162
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G N+FVG LI LY GK CG + ARC+
Sbjct: 163 GLDLNLFVGNGLIALY--GK-----------------------------CGCLPEARCVL 191
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNG--D 243
+ +DV+ WN++V+GY +A + +M K D + ++L N +
Sbjct: 192 DEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSEN 251
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V + +F + ++++ SWN +I Y N + + +D + +M + V P+ T +VL
Sbjct: 252 VLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQM-GKCEVEPDAITCASVLR 310
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
AC L AL + +H Y E N+ + N+LIDMYA+CG +E+A VF+ M +D+ +
Sbjct: 311 ACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVAS 370
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W ++IS M G+G A++LF EM+N+G+ PD I F+ IL AC+H GL+ EG YF+ M
Sbjct: 371 WTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMT 430
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
DY I P IEH+ C+VDLL R+GR+ EA + +K+MP++ + +W LL SCRVY N+++
Sbjct: 431 DDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIG 490
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
LA ++L +L P+ +V+LSNIY GRW +V I+ M+ +K+PG S++E+N
Sbjct: 491 ILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQ 550
Query: 544 V 544
V
Sbjct: 551 V 551
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 307/590 (52%), Gaps = 63/590 (10%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + +G +++ +++ + + A +F K+ +N+ SW A+ + + +
Sbjct: 80 QVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHG 139
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN----GFRANI 135
+ + LF +++ D F FP+VLK C + L G +LH +V+K G I
Sbjct: 140 YFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKI 199
Query: 136 FVG---------TALIELYSTGKAIEAAYKVFGEMD--ERNVVVWTSMINGYI------- 177
F G +I Y +E A ++F +M+ ++ + W SMI+GY
Sbjct: 200 FSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDE 259
Query: 178 --------------------------SCGDIVSARCLFELAPERDV--ILWNTIVSG--- 206
+C D+ S R E+ + V + WNT V G
Sbjct: 260 ALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALV 319
Query: 207 --YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP----ERNVF 260
Y ++ A+ FD + ++D +WN ++SGYA +E + L ++M E NV+
Sbjct: 320 EMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVY 379
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+WNG+I G+ NG L F M T + P+ T+ +L ACARL + K VH +
Sbjct: 380 TWNGIISGHVENGHNELALRLFTEMQTSS-LRPDIYTVGIILPACARLATIARGKQVHAH 438
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+ GY+ +V +G AL+DMYAKCG I++A+ V+N + +L++ N +++ AMHG G
Sbjct: 439 SIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEG 498
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
++LF M G PD +TF+ +L +C H G VE G +F M Y++ P ++HY C+VD
Sbjct: 499 IALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTCIVD 557
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL+RAGRL EA + VK++P + D+V+W LLG C ++ NVEL E+A E L ELEP N N
Sbjct: 558 LLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGN 617
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE--VVMLGC 548
+V+L+N+Y GRW D+ R + ++D G K PGCS IE E V L C
Sbjct: 618 YVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSC 667
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L T Q+ + G E +I ++ A+ + +A +++++I++ N+VS NA
Sbjct: 425 RLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNA 484
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M YA + + LF M P+ TF VL SCV A+ G E L+
Sbjct: 485 MLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYN 544
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDI----VSA 185
++ T +++L S ++ AY++ ++ + + V+W +++ G + G++ ++A
Sbjct: 545 VTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAA 604
Query: 186 RCLFELAP 193
L EL P
Sbjct: 605 ESLIELEP 612
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 295/530 (55%), Gaps = 16/530 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ VV +G ++ ++ A+ + ARK+FD++ ++NVVSW +M +G QN
Sbjct: 144 RLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNG 202
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+VLF +M++ + P+ +T VL +C + L +G +H V+K G N F+
Sbjct: 203 IAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISA 262
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
+L+++Y+ + +E A +VF E++ ++V+WT+MI GY + A LF + P
Sbjct: 263 SLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVP 322
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECK 248
I T++S +R++ R + K DV+ N ++ YA + E
Sbjct: 323 NSVTIA--TVISASAQLRHLPLGRSVHAIGVKLGTMESDVVR-NALVDMYAKCQALPEAN 379
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F + ++V +WN ++ GY+ NG+ E L F RM +G + P+ ++V LSAC L
Sbjct: 380 SIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQG-ISPDAISVVNALSACVCL 438
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
L K H YA + N+ V AL+++Y+KC + +A VFN M ++ +TW+ +I
Sbjct: 439 ADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMI 498
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G M G AG++ LF+EM P+ + F IL AC+H G+V G YF SMA ++I
Sbjct: 499 GGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNI 558
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P ++HY CMVD++ARAG L EA++F++ MPI+A +W + L C+++ +E E A++
Sbjct: 559 TPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIK 618
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
++ L P+ P +V++SN+Y GRW I+ M++ G KLPGCSS+
Sbjct: 619 KMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSV 668
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 209/447 (46%), Gaps = 20/447 (4%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL--DA 96
++++ A L + AR + D + ++ M H V L M++ A
Sbjct: 60 KLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAA 119
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
+ LK+CV+ R G LHC V+K G A+ FV +L+++Y+ +E A K
Sbjct: 120 AQADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARK 178
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGY 207
VF + ERNVV WTSM++G I G LF + +V +L + G
Sbjct: 179 VFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGG 238
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ I + + IS ++L YA VE+ +R+F+E+ ++ W +I
Sbjct: 239 LHQGRWIHGSVIKYGLSTNSFIS-ASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIV 297
Query: 268 GYANNGLFFEVLDAF--KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
GY N + L F K+ ++ + PN TI TV+SA A+L L + VH G
Sbjct: 298 GYTQNKRPLDALQLFLHKKFVS---IVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLG 354
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ V NAL+DMYAKC + A +F + KD++ WN++++G + +G +L LF+
Sbjct: 355 TMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFN 414
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M+ G PD I+ + L AC + + G F + A+ Y+ + I +++L ++
Sbjct: 415 RMRMQGISPDAISVVNALSACVCLADLHIGKG-FHTYAIKYAFMSNIYVNTALLNLYSKC 473
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLG 472
L A M + ++V W+ ++G
Sbjct: 474 ADLPSAQRVFNDM-TDRNSVTWSAMIG 499
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 18/374 (4%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ I V+ GL + +I+ ++ A+ +++ AR++FD++ ++V W AM G
Sbjct: 239 LHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVG 298
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y QN+ + LF K + +PN T V+ + ++ L G +H + +K G +
Sbjct: 299 YTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMES 358
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---- 190
V AL+++Y+ +A+ A +FG + ++VV W SM+ GY G + LF
Sbjct: 359 DVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRM 418
Query: 191 --LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS---WNT-MLSGYANNGDV 244
++P D I +S + + ++ + K +S NT +L+ Y+ D+
Sbjct: 419 QGISP--DAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADL 476
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+R+F +M +RN +W+ +IGGY G +D F ML E + PN+ ++LSA
Sbjct: 477 PSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKEN-IHPNEVVFTSILSA 535
Query: 305 CARLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
C+ G + K + A + ++ ++D+ A+ G +E A++ +M K I+
Sbjct: 536 CSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGIS 595
Query: 364 -WNTIISGLAMHGR 376
W + + G +H R
Sbjct: 596 VWGSFLHGCKLHSR 609
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ A L + +H I ++ G +SD + ++ A+ + + A +F +I +
Sbjct: 332 SASAQLRHLPLGRSVHAIGVKL---GTMESDVVRNALVDMYAKCQALPEANSIFGRILIK 388
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VV+WN+M GY++N +VLF +M+ P+ + L +CV + L G+ H
Sbjct: 389 DVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFH 448
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K F +NI+V TAL+ LYS + +A +VF +M +RN V W++MI GY GD
Sbjct: 449 TYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSA 508
Query: 184 SARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTM 234
+ LF + ++ +++ +I+S + ++ FD M + I+ + M
Sbjct: 509 GSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACM 568
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFS-WNGLIGG 268
+ A G++EE + MP + S W + G
Sbjct: 569 VDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHG 603
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 293/525 (55%), Gaps = 11/525 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ G E Y+ +I ++ + A K+F + ++V SWNAM +G+ QN
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + +MK + + T +L C + N + G +H V+K+G +++FV
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI +YS ++ A +VF M+ R++V W S+I Y D V+A F+ + P
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFD---QMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ ++ + G + R + A F + + D++ N +++ YA G ++ + +
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLG 309
FE++P R+V SWN LI GYA NGL E +DA+ M+ EGR + PN T V++L A + +G
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYN-MMEEGRTIVPNQGTWVSILPAYSHVG 466
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL +H N +V V LIDMY KCG +E+A+ +F + + + WN IIS
Sbjct: 467 ALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIIS 526
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
L +HG G AL LF +M+ G D ITF+ +L AC+H GLV+E F +M +Y I
Sbjct: 527 SLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIK 586
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HYGCMVDL RAG L +A + V MPI+ADA IW LL +CR++ N EL A +R
Sbjct: 587 PNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDR 646
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
L E++ +N +V+LSNIY ++G+W+ +++ RD G +K PG
Sbjct: 647 LLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG 691
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 250/475 (52%), Gaps = 17/475 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ G + + +++T A L ++ + F I +N+ SWN+M + Y +
Sbjct: 69 QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRG 128
Query: 80 FHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+R + T++ L + P+ +TFP VLK+C+ +L +GE++HC VLK GF +++V
Sbjct: 129 RYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHCWVLKMGFEHDVYVA 185
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+LI LYS A+E A+KVF +M R+V W +MI+G+ G++ A + + +V
Sbjct: 186 ASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVK 245
Query: 199 LWNTIVSGYID--------VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ VS + V ++ + + DV N +++ Y+ G +++ +R+
Sbjct: 246 MDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRV 305
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ M R++ SWN +I Y N L FK ML G + P+ T+V++ S +L
Sbjct: 306 FDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG-MRPDLLTVVSLASIFGQLSD 364
Query: 311 LDFSKWVHVY-AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ VH + + ++ +GNAL++MYAK G I+ A VF + ++D+I+WNT+I+
Sbjct: 365 RRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLIT 424
Query: 370 GLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
G A +G + A+ ++ M+ + P+ T++ IL A +H+G +++G+ + +
Sbjct: 425 GYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK-IHGRLIKNCL 483
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ C++D+ + GRL +A+ +P E +V W ++ S ++ + E A
Sbjct: 484 FLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET-SVPWNAIISSLGIHGHGEKA 537
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 302/581 (51%), Gaps = 57/581 (9%)
Query: 20 QIQTQVVTSGLEKSDYITP---RIITACAQ-----LKQMTYARKMFDKITD--QNVVSWN 69
++ + SGL S +P R++ A A + + +A + + + +N
Sbjct: 26 KLHAHHLVSGLLSSHSTSPFIDRLVAAFAHSDPASPRPLLHALAILASLPSPPDSAFPYN 85
Query: 70 AMFNGYA----QNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
A F + Q+ R + L+ + A P+ TFP ++K+C ++ G +
Sbjct: 86 AAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLG 145
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---- 180
V K GF A++FV A + +S + A ++F E R+VV W ++I GY+ G
Sbjct: 146 HVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPRE 205
Query: 181 ---------------------------------DIVSARCLFELAPER----DVILWNTI 203
D+ + L E + V L N +
Sbjct: 206 ALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAV 265
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
+ Y+ ++ A +F+++ + +SW TM+ G+A G +E+ + LF+EMPER+VF WN
Sbjct: 266 MDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWN 325
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
L+ GY N E + F M + +V PN+ T+V +LSAC++LGAL+ WVH Y +
Sbjct: 326 ALMAGYVQNKQGKEAIALFHEM-QKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR 384
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ +V +G +L+DMYAKCG I+ A+ VFN + ++ +TW ++I GLA HG A+
Sbjct: 385 HKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEY 444
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F M + G PD ITFIG+L AC H GLVE G +F M Y + +++HY CM+DLL
Sbjct: 445 FQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLG 504
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG L EA V MP++ DAV+W L +CR++ N+ L E A +L EL+P + +V+
Sbjct: 505 RAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVL 564
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+N+Y + K +++V MR G +K+PGCS IE+N VV
Sbjct: 565 LANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVV 605
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/562 (35%), Positives = 307/562 (54%), Gaps = 23/562 (4%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQL-KQMTYARKMFDKITDQNVVSWNAMFNGY 75
H QI V+ SGLE ++ ++T +L RK+FD + ++V+SW +M +GY
Sbjct: 77 HGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGY 136
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + LF +M PN FT V+K+C ++ L+ G H +VL GF +N
Sbjct: 137 VRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY 196
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+ +ALI+++ A++ A ++F E+ E + + WTS+I+ ++ D F + +R
Sbjct: 197 VIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISA-LTRNDFFDEALRFFYSMQR 255
Query: 196 D------VILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVE 245
D + T+++ ++ + + +++ ++ +V+ ++++ Y G V
Sbjct: 256 DHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVG 315
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E +R+F+ MP +N SW+ L+GGY NG F V+ F++M + T+L C
Sbjct: 316 ESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK-----VDLYCFGTILRTC 370
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A L A+ K VH G +V V +AL+D+YAKCG IE A +F+ M ++LITWN
Sbjct: 371 AGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWN 430
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++I G A +GRG AL +F++M G PD I+FIGIL AC+H GLV+EG YF SM D
Sbjct: 431 SMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKD 490
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I IEHY CMVDLL RAG L EA ++ D+ +WA LLG+C N E+AE
Sbjct: 491 YGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAER 550
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM 545
+R+ ELEP ++V+L+N+Y +GRW D RI+ M+D G K+PG S IE
Sbjct: 551 IAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNN-- 608
Query: 546 LGCLSRELD-RKSIVRAEANMI 566
L D S+V E+N +
Sbjct: 609 ---LGSSFDFENSLVPGESNFL 627
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 181/387 (46%), Gaps = 31/387 (8%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-STGKAIEAAYKVFGEM 161
+ +L++C K+ A G ++H V+K+G + FVG +L+ LY G KVF +
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEAR 217
++V+ WTSMI+GY+ G +++ LF E + + ++ ++ ++ R
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181
Query: 218 --------KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ FD + + + ++ + N +++ ++LF+E+ E + W +I
Sbjct: 182 IFHGVVLGRGFDS----NYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISAL 237
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
N F E L F M + + P+ T TVL+AC LG L K VH G+ GN
Sbjct: 238 TRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGN 297
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V ++L+DMY KCG + + +F+ M K+ ++W+ ++ G +G + +F +M
Sbjct: 298 VVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM-- 355
Query: 390 AGEMPDGITFIGILCACTHMGLVEEG----LSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
E D F IL C + V +G Y + IV +VDL A+
Sbjct: 356 --EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVES-----ALVDLYAKC 408
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLG 472
G + A +MP+ + + W +++G
Sbjct: 409 GCIEYAQTIFDQMPVR-NLITWNSMIG 434
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
+ + G + ++L C ++ A + +H + +G + + VGN+L+ +Y K
Sbjct: 48 KSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKL 107
Query: 344 GI-IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G VF+ + KD+I+W ++ISG G+ +L LF +M G P+ T +
Sbjct: 108 GTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAV 167
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ AC+ +G ++ G F + + ++D+ R L +A + +E
Sbjct: 168 IKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-LEP 225
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKN---PANFVMLSNIY--GDLGRWKDV 517
DA+ W +++ + + +N + + AL ++ + P F + + G+LGR K
Sbjct: 226 DAICWTSIISA--LTRN-DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQG 282
Query: 518 ARIKVAMRDTGF 529
+ + TGF
Sbjct: 283 KEVHAKVITTGF 294
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 299/536 (55%), Gaps = 9/536 (1%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+Q+ V++ G + ++ ++ Q++ A K+F+ + D NVV+WN M G+ QN
Sbjct: 93 NQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQN 152
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
F +LF++M P+ TF L S + +L++G+E+H +L++G ++F+
Sbjct: 153 GFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLK 212
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPE 194
+ALI++Y + + A K+F + ++VV T++I+GY+ G A R L E
Sbjct: 213 SALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMS 272
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRL 250
+ + +++ + + ++L + K + + ++ YA G ++ ++
Sbjct: 273 PNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQI 332
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F MPE++ WN +I + NG E +D F++M EG + + +I LSACA L A
Sbjct: 333 FRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSY-DCVSISAALSACANLPA 391
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L K +H + + V +ALIDMY KCG + A VF+ M K+ ++WN+II+
Sbjct: 392 LHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAA 451
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
HG +L+LFH+M G PD +TF+ IL AC H G V++G+ YF+ M +Y I
Sbjct: 452 YGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPA 511
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHY C+VDL RAGRL EA + +K MP D +W LLG+CRV+ NVELAE+A L
Sbjct: 512 RMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCL 571
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+L+P+N +V+LSN++ D G+W V +I+ M+ G +K+PG S IEVN+ +
Sbjct: 572 LDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHM 627
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 238/490 (48%), Gaps = 19/490 (3%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G +++ +I A+ + AR++FDK+ +++ V WN M NG+ + + V +F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALRE-GEELHCLVLKNGFRANIFVGTALIELYST 147
M+ PN TF VL C AL E G +LH LV+ GF + V AL+ +YS
Sbjct: 62 EDMRNCQTKPNSITFASVLSICAS-EALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWN 201
+ A K+F M + NVV W MI G++ G + A LF ++P D I +
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSP--DSITFA 178
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ + + ++ + +++ + + DV + ++ Y DV ++F++
Sbjct: 179 SFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNV 238
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
++ +I GY NGL + L+ F+ +L E ++ PN T+ +VL ACA L L+ K +
Sbjct: 239 DIVVCTAIISGYVLNGLNNDALEIFRWLLEE-KMSPNAVTLASVLPACAGLATLNLGKEL 297
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H +G VG+A++DMYAKCG ++ A +F M KD + WN II+ + +G+
Sbjct: 298 HANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKP 357
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A+ LF +M G D ++ L AC ++ + G + S + + ++
Sbjct: 358 QEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKA-IHSFMIKGAFDSEVFAESA 416
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEP 495
++D+ + G L+ A V M E + V W +++ + + ++E++ ++ E ++P
Sbjct: 417 LIDMYGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQP 475
Query: 496 KNPANFVMLS 505
+ +LS
Sbjct: 476 DHVTFLTILS 485
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 13/226 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L H I + ++ + + +I + ++ AR +FD + ++N VSWN++
Sbjct: 389 LPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSI 448
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNG 130
Y + + LF +M + P+ TF +L +C + +G + C+ + G
Sbjct: 449 IAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYG 508
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSA 185
A + +++L+ + A++ M + VW +++ G++ V++
Sbjct: 509 IPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVAS 568
Query: 186 RCLFELAPERD---VILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
RCL +L PE V+L N + D RK+ M K+ V
Sbjct: 569 RCLLDLDPENSGCYVLLSNV----HADAGQWGSVRKIRSLMKKRGV 610
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 296/533 (55%), Gaps = 9/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q + + +G+ + ++ + + A + F +NVV WN M Y +
Sbjct: 393 QFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLD 452
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+FTQM+ PN FT+P +L++C + A+ GE++H VLK GF+ N++V +
Sbjct: 453 NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
LI++Y+ ++ A K+F + E++VV WT+MI GY A LF+ ++
Sbjct: 513 VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDVEECKRLF 251
D I + + +S ++ + + +++ Q D+ N ++S YA G V + F
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAF 632
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+++ ++ SWN LI G+A +G E L F +M G+ N T +SA A + +
Sbjct: 633 DKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEI-NSFTFGPAVSAAANVANV 691
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H G+ V N LI +YAKCG I++A F M K+ I+WN +++G
Sbjct: 692 KLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGY 751
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ HG G ALSLF +MK G +P+ +TF+G+L AC+H+GLV+EG+ YFQSM + +VP+
Sbjct: 752 SQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPK 811
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
EHY C+VDLL R+G L+ A FV+ MPI+ DA++ LL +C V+KN+++ E A L
Sbjct: 812 PEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLL 871
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEPK+ A +V+LSN+Y G+W R + M+D G KK PG S IEVN V
Sbjct: 872 ELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSV 924
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/465 (29%), Positives = 222/465 (47%), Gaps = 17/465 (3%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
+ +I + +T G E S ++ +I + + A+K+FD + ++ VSW AM +G +Q
Sbjct: 189 VEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQ 248
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ V+LF QM P + F VL +C K+ + GE+LH LVLK GF +V
Sbjct: 249 SGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV 308
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIVSARCLFEL 191
AL+ LYS A +VF M +R+ V + S+I+G G ++ CL L
Sbjct: 309 CNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEEC 247
P D + +++S V ++ ++ K D+I +L Y D++
Sbjct: 369 KP--DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTA 426
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
F NV WN ++ Y E F +M EG + PN T ++L C+
Sbjct: 427 HEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEG-IEPNQFTYPSILRTCSS 485
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L A+D + +H G+Q NV V + LIDMYAK G +++A+ +F + KD+++W +
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAM 545
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDY 426
I+G A H + A AL+LF EM++ G D I F + AC + + +G + Q+ Y
Sbjct: 546 IAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGY 605
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
S + +V L AR G++ +A F D + W +L+
Sbjct: 606 S--DDLSVGNALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLI 647
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 237/470 (50%), Gaps = 13/470 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
++E K Q+ V+ G Y+ ++T ++L A ++F+ + ++ VS+N+
Sbjct: 283 KVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNS 342
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ +G +Q + + LF +M LD + P+C T +L +C + AL G++ H +K
Sbjct: 343 LISGLSQQGYSDKALELFKKMC-LDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKA 401
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G ++I + AL++LY I+ A++ F + NVV+W M+ Y ++ + +F
Sbjct: 402 GMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIF 461
Query: 190 ELAP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANN 241
E + + +I+ +R + ++ Q+ K +V + ++ YA
Sbjct: 462 TQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKL 521
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G ++ ++F + E++V SW +I GYA + F E L+ FK M +G + ++ +
Sbjct: 522 GKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQG-IHSDNIGFASA 580
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+SACA + AL+ + +H A +GY ++ VGNAL+ +YA+CG + +A F+ + +KD
Sbjct: 581 ISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN 640
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
I+WN++ISG A G ALSLF +M AG+ + TF + A ++ V+ G +
Sbjct: 641 ISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLG-KQIHA 699
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
M + + E ++ L A+ G + +A MP E + + W +L
Sbjct: 700 MIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWNAML 748
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 213/456 (46%), Gaps = 21/456 (4%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC-- 110
A +FD++ + + WN + + + + V+ LF +M + P+ T+ VL+ C
Sbjct: 122 AVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG 181
Query: 111 --VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
V + + E++H + +G+ ++FV LI+LY + +A KVF + +R+ V
Sbjct: 182 GDVPFHCV---EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS 238
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP---- 224
W +M++G G A LF V I S + +E K+ +Q+
Sbjct: 239 WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVL 298
Query: 225 ----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ N +++ Y+ G+ +++F M +R+ S+N LI G + G + L+
Sbjct: 299 KQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALE 358
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
FK+M + + P+ T+ ++LSAC+ +GAL K H YA G ++ + AL+D+Y
Sbjct: 359 LFKKMCLDC-LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLY 417
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
KC I+ A + F S +T++++ WN ++ + + +F +M+ G P+ T+
Sbjct: 418 VKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYP 477
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
IL C+ + V+ G + + + ++D+ A+ G+L A+ +R+
Sbjct: 478 SILRTCSSLRAVDLG-EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK- 535
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
E D V W ++ Y E AL E++ +
Sbjct: 536 EKDVVSWTAMIAG---YAQHEKFAEALNLFKEMQDQ 568
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 239/552 (43%), Gaps = 40/552 (7%)
Query: 35 YITPR-----IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
YIT + I+ Q + + F K + N A+ Y+ +E +
Sbjct: 2 YITIKTYFKSIVNKIKQFRPVVSIFFFFQKFLEHNT----ALSYAYSNDEGEANGINFLH 57
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
M++ N T+ +L C+ +G +LH +LK GF A + + L++LY
Sbjct: 58 LMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFG 117
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSA-RCLFELAPERDVILWNTIVS 205
++ A VF EM R + W +++ +++ G ++ R + + + D + ++
Sbjct: 118 DLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLR 177
Query: 206 GY------IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
G I AR + + + N ++ Y NG + K++F+ + +R+
Sbjct: 178 GCGGGDVPFHCVEKIHARTI-THGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SW ++ G + +G E + F +M T G V+P +VLSAC ++ + +H
Sbjct: 237 VSWVAMLSGLSQSGCEEEAVLLFCQMHTSG-VYPTPYIFSSVLSACTKVEFYKVGEQLHG 295
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
G+ V NAL+ +Y++ G A VFN+M +D +++N++ISGL+ G
Sbjct: 296 LVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDK 355
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL LF +M PD +T +L AC+ +G + G F S A+ + I G ++
Sbjct: 356 ALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG-KQFHSYAIKAGMSSDIILEGALL 414
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE-----LAELALERLTELE 494
DL + + A +F E + V+W +L + + N+ ++ +E + +
Sbjct: 415 DLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQ 473
Query: 495 PKNPANFVMLSNIYG-DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLS--- 550
P+ S++ DLG +I + TGF+ SS+ ++ LG L
Sbjct: 474 FTYPSILRTCSSLRAVDLGE-----QIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHAL 528
Query: 551 ---RELDRKSIV 559
R L K +V
Sbjct: 529 KIFRRLKEKDVV 540
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 290/544 (53%), Gaps = 46/544 (8%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A L K LH +VT+G + + + +++ Q+++ARK+FDKI NV
Sbjct: 38 ARDRALHAGKKLH---AHLVTNGFARFNVVASNLVSFYTCCGQLSHARKLFDKIPTTNVR 94
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PN-CFTFPIVLKSCVKINALREGEELHC 124
W A+ A+ F+ + +F++M+ + + PN F P VLK+C + GE++H
Sbjct: 95 RWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIHG 154
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+LK F + FV ++LI +YS C +
Sbjct: 155 FILKCSFELDSFVSSSLIVMYS-------------------------------KCAKVED 183
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYAN 240
AR +F+ +D + N +V+GY+ EA L + M K +V++WN+++SG++
Sbjct: 184 ARKVFDGMTVKDTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQ 243
Query: 241 NGDVEECKRLFEEM----PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
GD +F M E +V SW +I G+ N E D FK+ML+ G P A
Sbjct: 244 KGDQGRVSEIFRLMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHG-FHPTSA 302
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
TI +L ACA + + +H YA G +G++ V +AL+DMYAKCG I A ++F+ M
Sbjct: 303 TISALLPACATAARVSVGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRM 362
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP-DGITFIGILCACTHMGLVEEG 415
K+ +TWN+II G A HG A+ LF++M+ G D +TF L AC+H+G E G
Sbjct: 363 PEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELG 422
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
F+ M YSI P++EHY CMVDLL RAG+L EA +K MPIE D +W LL +CR
Sbjct: 423 QRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVWGALLAACR 482
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
+++VELAE+A L ELEP++ AN ++LS++Y D G+W R+K ++ +KL G
Sbjct: 483 NHRHVELAEVAAMHLMELEPESAANPLLLSSVYADAGKWGKFERVKKRIKKGKLRKLQGL 542
Query: 536 SSIE 539
S IE
Sbjct: 543 SWIE 546
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 298/536 (55%), Gaps = 17/536 (3%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQL-KQMTYARKMFDKITDQNVVSWNAMFNGY 75
H QI V+ SGLE ++ ++T +L RK+FD + ++V+SW +M +GY
Sbjct: 136 HGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGY 195
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + LF +M PN FT V+K+C ++ L+ G H +VL GF +N
Sbjct: 196 VRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY 255
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+ +ALI+++ A++ A ++F E+ E + + WTS+I+ ++ D F + +R
Sbjct: 256 VIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISA-LTRNDFFDEALRFFYSMQR 314
Query: 196 DV------ILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVE 245
D + T+++ ++ + + +++ ++ +V+ ++++ Y G V
Sbjct: 315 DHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVG 374
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E +R+F+ MP +N SW+ L+GGY NG F V+ F++M + T+L C
Sbjct: 375 ESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK-----VDLYCFGTILRTC 429
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A L A+ K VH G +V V +AL+D+YAKCG IE A +F+ M ++LITWN
Sbjct: 430 AGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWN 489
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++I G A +GRG AL +F++M G PD I+FIGIL AC+H GLV+EG YF SM D
Sbjct: 490 SMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKD 549
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I IEHY CMVDLL RAG L EA ++ D+ +WA LLG+C N E+AE
Sbjct: 550 YGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAER 609
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+R+ ELEP ++V+L+N+Y +GRW D RI+ M+D G K+PG S IE
Sbjct: 610 IAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETK 665
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 181/387 (46%), Gaps = 31/387 (8%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-STGKAIEAAYKVFGEM 161
+ +L++C K+ A G ++H V+K+G + FVG +L+ LY G KVF +
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEAR 217
++V+ WTSMI+GY+ G +++ LF E + + ++ ++ ++ R
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 218 --------KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ FD + + + ++ + N +++ ++LF+E+ E + W +I
Sbjct: 241 IFHGVVLGRGFDS----NYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISAL 296
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
N F E L F M + + P+ T TVL+AC LG L K VH G+ GN
Sbjct: 297 TRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGN 356
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V ++L+DMY KCG + + +F+ M K+ ++W+ ++ G +G + +F +M
Sbjct: 357 VVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM-- 414
Query: 390 AGEMPDGITFIGILCACTHMGLVEEG----LSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
E D F IL C + V +G Y + IV +VDL A+
Sbjct: 415 --EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVES-----ALVDLYAKC 467
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLG 472
G + A +MP+ + + W +++G
Sbjct: 468 GCIEYAQTIFDQMPVR-NLITWNSMIG 493
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
+ + G + ++L C ++ A + +H + +G + + VGN+L+ +Y K
Sbjct: 107 KSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKL 166
Query: 344 GI-IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G VF+ + KD+I+W ++ISG G+ +L LF +M G P+ T +
Sbjct: 167 GTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAV 226
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ AC+ +G ++ G F + + ++D+ R L +A + +E
Sbjct: 227 IKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-LEP 284
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKN---PANFVMLSNIY--GDLGRWKDV 517
DA+ W +++ + + +N + + AL ++ + P F + + G+LGR K
Sbjct: 285 DAICWTSIISA--LTRN-DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQG 341
Query: 518 ARIKVAMRDTGF 529
+ + TGF
Sbjct: 342 KEVHAKVITTGF 353
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 275/537 (51%), Gaps = 82/537 (15%)
Query: 54 RKMFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
R MF K D+ +V SWN++ +A++ + F+ M+KL PN TFP +KSC
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ L G+++H G+ ++IFV +ALI++YS
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYS-------------------------- 132
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW- 231
CG + AR LF+ PER+V+ W +++SGY+ EA LF + D +
Sbjct: 133 -----KCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYD 187
Query: 232 -------------------------------------------------NTMLSGYANNG 242
NT++ YA G
Sbjct: 188 EIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCG 247
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
++ +++F+ M E +V SWN LI YA NGL E F M+ G V N T+ VL
Sbjct: 248 EISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVL 307
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA GAL K +H + N+ VG +++DMY KCG +E A F+ + K++
Sbjct: 308 LACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVK 367
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+W +++G MHG G A+ +F+EM G P+ ITF+ +L AC+H GL++EG +F M
Sbjct: 368 SWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKM 427
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
++ + P IEHY CMVDLL RAG L EA ++ M ++ D ++W +LLG+CR++KNVEL
Sbjct: 428 KCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVEL 487
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
E++ +L +L+P N +V+LSNIY D GRW DV R+++ M++ G K PG S +E
Sbjct: 488 GEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVE 544
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 172/386 (44%), Gaps = 41/386 (10%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI Q G ++ +I ++ + ARK+FD+I ++NVVSW +M +GY QNE
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 80 FHRTVVVLFTQMKKLD-----------AMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
R V LF + +D + V+ +C ++ E +H L +K
Sbjct: 167 RAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK 226
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GF + VG L++ Y+ I + KVF M+E +V W S+I Y G V A L
Sbjct: 227 KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286
Query: 189 FELAPERDVILWNTIV----------SGYIDVRNMIEARKLFDQMPK----KDVISWNTM 234
F +R + +N + SG + + I DQ+ K +++ ++
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH-----DQVVKMELEDNLVVGTSI 341
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ Y G VE ++ F+ + +NV SW ++ GY +G E + F M+ G + PN
Sbjct: 342 VDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG-IKPN 400
Query: 295 DATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
T V+VL+AC+ G L F+K + G + C ++D+ + G ++ A
Sbjct: 401 YITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSC----MVDLLGRAGYLKEA 456
Query: 350 VDVFNSMDTK-DLITWNTIISGLAMH 374
+ M K D I W +++ +H
Sbjct: 457 YGLIQEMKVKPDFIVWGSLLGACRIH 482
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AHS L+ K +H QVV LE + + I+ + ++ ARK FD++ +NV
Sbjct: 311 AHSGALQIGKCIHD---QVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVK 367
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EEL 122
SW M GY + + + +F +M + PN TF VL +C L+EG ++
Sbjct: 368 SWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKM 427
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGY 176
C + I + +++L ++ AY + EM + + +VW S+ I+
Sbjct: 428 KC---EFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKN 484
Query: 177 ISCGDIVSARCLFELAP 193
+ G+I SAR LF+L P
Sbjct: 485 VELGEI-SARKLFKLDP 500
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 299/546 (54%), Gaps = 42/546 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
I++A ++L +++ +FD + ++ VSWN++ +GYA V + M K D N
Sbjct: 81 ILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140
Query: 100 C--FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
TF +L K ++ G ++H V+K GF + +FVG+ L+++YS I A KV
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY---------I 208
F E+ E+NVV++ ++I G + CG + ++ LF ERD I W ++++G+ I
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAI 260
Query: 209 DV-RNMIEARKLFDQMP-----------------------------KKDVISWNTMLSGY 238
D+ R M DQ K ++ + ++ Y
Sbjct: 261 DIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMY 320
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+++ + +F++M +NV SW ++ GY NG E + F M G + P+D T+
Sbjct: 321 CKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG-IEPDDFTL 379
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+V+S+CA L +L+ H A +G + V NAL+ +Y KCG IE++ +FN +
Sbjct: 380 GSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF 439
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
KD +TW ++SG A G+ + LF M G PD +TFIG+L AC+ GLVE+G
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQI 499
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+SM ++ IVP +HY CM+DL +RAGR+ EA +F+ +MP DA+ WA LL SCR Y
Sbjct: 500 FESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYG 559
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
N+++ + A E L EL+P N A++V+LS++Y G+W++VAR++ MRD G +K PGCS I
Sbjct: 560 NMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWI 619
Query: 539 EVNEVV 544
+ V
Sbjct: 620 KYKNQV 625
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 196/399 (49%), Gaps = 46/399 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV------------- 66
QI VV G ++ ++ +++ ++ ARK+FD++ ++NVV
Sbjct: 164 QIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCG 223
Query: 67 ------------------SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
SW +M G+ QN R + +F +MK + + +TF VL
Sbjct: 224 RVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLT 283
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+C + AL+EG+++H +++ ++ NIFV +AL+++Y K I++A VF +M +NVV
Sbjct: 284 ACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVS 343
Query: 169 WTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
WT+M+ GY G A F + E D +++S ++ ++ E + +
Sbjct: 344 WTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARAL 403
Query: 225 KKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+IS+ N +++ Y G +E+ RLF E+ ++ +W L+ GYA G E +
Sbjct: 404 TSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIG 463
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN---ALI 337
F+ ML G + P+ T + VLSAC+R G ++ K ++ G V + + +I
Sbjct: 464 LFESMLAHG-LKPDKVTFIGVLSACSRAGLVE--KGNQIFESMINEHGIVPIQDHYTCMI 520
Query: 338 DMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
D++++ G IE A + N M + D I+W T++S +G
Sbjct: 521 DLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYG 559
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 190/438 (43%), Gaps = 75/438 (17%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+LK C + + + + LH ++K F+ LI Y+ +I A KVF +M N
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ W ++++ Y G + LF+ P RD + WN+++SGY + ++ K ++ M K
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 226 KD------VISWNTML-----------------------------------SGYANNGDV 244
D I+++T+L Y+ G +
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 245 EECKRLFEEMPERNV-------------------------------FSWNGLIGGYANNG 273
+++F+E+PE+NV SW +I G+ NG
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L + +D F+ M E + T +VL+AC + AL K VH Y Y+ N+ V
Sbjct: 255 LDRDAIDIFREMKLENLQM-DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+AL+DMY KC I++A VF M K++++W ++ G +G A+ F +M+ G
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD T ++ +C ++ +EEG + F + A+ ++ I +V L + G + ++
Sbjct: 374 PDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 454 FVKRMPIEADAVIWANLL 471
+ + D V W L+
Sbjct: 433 LFNEISFK-DEVTWTALV 449
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 16/344 (4%)
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P + L N ++S Y + ++ A K+FDQMP ++ SWNT+LS Y+ G V E + LF+
Sbjct: 40 PYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFD 99
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGAL 311
MP R+ SWN LI GYA GL ++ + A+ ML +G N T T+L ++ G +
Sbjct: 100 AMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCV 159
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ +H + G+ V VG+ L+DMY+K G+I A VF+ + K+++ +NT+I GL
Sbjct: 160 KLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGL 219
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
GR + LF EM+ D I++ ++ T GL + + F+ M ++ Q
Sbjct: 220 MRCGRVEDSKRLFFEMRER----DSISWTSMITGFTQNGLDRDAIDIFREMKLEN---LQ 272
Query: 432 IEHYGCMVDLLARAGRLA-----EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
++ Y L A G +A + ++ R + + + + L+ KN++ AE
Sbjct: 273 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAV 332
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+++T KN ++ + YG G ++ + M+ G +
Sbjct: 333 FKKMT---CKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 297/540 (55%), Gaps = 10/540 (1%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L + + ++ ++ SG++ + Y+ +++ A+ +T AR++FD I D+N+VSW A
Sbjct: 59 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTA 118
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M + + + MK P+ TF +L + L+ G+++H +++ G
Sbjct: 119 MIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAG 178
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
VGT+L+ +Y+ I A +F + E+NVV WT +I GY G + A L E
Sbjct: 179 LELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLE 238
Query: 191 LAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG 242
+ +V I + +I+ G + +K+ + + +++ N++++ Y G
Sbjct: 239 TMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCG 298
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+EE ++LF ++P R+V +W ++ GYA G E ++ F+RM +G + P+ T +VL
Sbjct: 299 GLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG-IKPDKMTFTSVL 357
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
++C+ L K +H + GY +V + +AL+ MYAKCG +++A VFN M ++++
Sbjct: 358 TSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVV 417
Query: 363 TWNTIISGL-AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
W II+G A HGR AL F +MK G PD +TF +L ACTH+GLVEEG +F+S
Sbjct: 418 AWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRS 477
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M +DY I P +EHY C VDLL RAG L EA + + MP +W LL +CRV+ +VE
Sbjct: 478 MYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVE 537
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
E A E + +L+P + +V LS+IY GR++D +++ M K PG S IEV+
Sbjct: 538 RGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 597
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 197/381 (51%), Gaps = 13/381 (3%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +L+ C ++ +L +G E+H +LK+G + N ++ L+ +Y+ ++ A +VF +
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTIVSGYIDVRNMIEARK 218
+RN+V WT+MI +++ + A +E + D + + ++++ + + + +K
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 219 LFDQMPKKDV---ISWNTMLSG-YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+ ++ + + T L G YA GD+ + + +F+ +PE+NV +W LI GYA G
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
L+ + M + V PN T ++L C AL+ K VH Y +GY + V N
Sbjct: 230 VDVALELLETM-QQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVN 288
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
+LI MY KCG +E A +F+ + +D++TW +++G A G A++LF M+ G P
Sbjct: 289 SLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKP 348
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMA-MDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
D +TF +L +C+ ++EG Q + Y++ ++ +V + A+ G + +A
Sbjct: 349 DKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDASL 406
Query: 454 FVKRMPIEADAVIWANLLGSC 474
+M E + V W ++ C
Sbjct: 407 VFNQMS-ERNVVAWTAIITGC 426
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 271 NNGLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
G E L M+ +G RV+ + +L CARL +L+ + VH +G Q N
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSD--VFRGLLQECARLRSLEQGREVHAAILKSGIQPN 81
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ N L+ MYAKCG + +A VF+S+ +++++W +I + A + MK
Sbjct: 82 RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
AG PD +TF+ +L A T+ L++ G + + + + P++ +V + A+ G +
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDI 199
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
++A R+P E + V W L+ V++A LE + + E
Sbjct: 200 SKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 291/497 (58%), Gaps = 8/497 (1%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNE--FHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
M A +F K+ ++VV+W + +G+++N + + + M+ + PN FTF V+
Sbjct: 180 MDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVV 239
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
++C ++ L G +H L++K G + +G AL+E Y +AI+ A +V + +
Sbjct: 240 RACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLN 299
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
S+I G IS G I A +F E + + +N ++ GY M ++++LF++MP +
Sbjct: 300 ALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRT 359
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
+ S NTM+S Y+ NG++++ LFEE E++ +WN +I GY ++G + +A K +
Sbjct: 360 IFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSG---QPEEALKLYI 416
Query: 287 TEGR--VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
T R + +T + AC+ LG+L + +H + ++ NV VG +LIDMY+KCG
Sbjct: 417 TMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCG 476
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
I A F S+ + ++ W +I+G A HG G+ A+SLF M G P+G TF+G+L
Sbjct: 477 SIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLS 536
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+ GLV EG+ F SM YS+ P +EHY C+VDLL R+G + EA +F+K+MP+EAD
Sbjct: 537 ACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADG 596
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
V+W LL +C + ++E+ E E++ +PK +++V+LSNIY LGRW++ ++ +
Sbjct: 597 VVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKIL 656
Query: 525 RDTGFKKLPGCSSIEVN 541
R KK PGCS IE+N
Sbjct: 657 RGFKVKKDPGCSWIELN 673
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 192/440 (43%), Gaps = 71/440 (16%)
Query: 33 SDYITPRI-ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM 91
S+ I+ I I+ A+ ++ AR++FD++ + VVSWN M + Y+++ + L M
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89
Query: 92 KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
+ + TF VL C ++ LR+G+ +HCLVLK+G + VG+AL+ Y++ I
Sbjct: 90 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 149
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
A +VF + RN V+W+ M+ GY++C + A +F P RDV+ W T++
Sbjct: 150 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLI------- 202
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
SG++ NGD C + E
Sbjct: 203 ------------------------SGFSKNGD--GCGKALE------------------- 217
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F+ M+ G PN+ T V+ AC RLG L + VH G + +
Sbjct: 218 ---------IFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPS 268
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+G AL++ Y +C I++A+ V + L N++I GL GR A +F+ M
Sbjct: 269 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMN 328
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+ + G G +++ F+ M I M+ + +R G + +A
Sbjct: 329 PVSYNLMIKGYAVG----GQMDDSKRLFEKMP-----CRTIFSSNTMISVYSRNGEIDKA 379
Query: 452 VDFVKRMPIEADAVIWANLL 471
++ + E D V W +++
Sbjct: 380 LELFEETKNEKDPVTWNSMI 399
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 13/227 (5%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ + ++ + E + Y+ +I ++ + A+ F I NV +W A+ NG
Sbjct: 443 LHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALING 502
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRA 133
+A + + LF +M + PN TF VL +C + + EG ++ H +
Sbjct: 503 HAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTP 562
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGY-----ISCGDIVSARC 187
+ +++L I A + +M E + VVW ++++ + G+ V+ +
Sbjct: 563 TLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKM 622
Query: 188 L-FELAPERDVILWNTIVSGYIDVRNMIEARKLFD--QMPKKDVISW 231
F+ P ++ + I +G R + RK+ ++ K SW
Sbjct: 623 FSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSW 669
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 323 YNGYQGN---VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
Y +Q N + N I YAK ++ A +F+ M + +++WNT+IS + HGR +
Sbjct: 22 YTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSE 81
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
AL L + M + TF +L C + + +G
Sbjct: 82 ALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDG 117
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 188/517 (36%), Positives = 289/517 (55%), Gaps = 52/517 (10%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R+ AC + AR +FD+ITD+NVV +N M Y N ++ ++++ M +P
Sbjct: 62 RVYAACGE---PGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVP 118
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ +T+P VLK+ + ++L G ++H VLK G N++VG LI +Y K+++ A +V
Sbjct: 119 DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVL 178
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI-----------LWNTIVSGY 207
E+ R+VV W SM++ Y G A EL E + + L + +
Sbjct: 179 DEIPCRDVVSWNSMVSVYAQNGRFNDA---LELCREMEALNLKPNDCTMASLLPAVTNTT 235
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
D N++ +++F ++ KK VISWN M++ Y NN +E L+ +M NG
Sbjct: 236 SD--NVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEA------NG--- 284
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
V P+ +IV+VL A L AL + VH +AE
Sbjct: 285 -----------------------VEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLL 321
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N+ + NALIDMYAKCG + +A VFN M +D+++W +IIS G+G A+++F EM
Sbjct: 322 PNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEM 381
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+N+G PD I F+ +L AC+H GL+++G YF MA + I P++EH+ C+VDLL RAG+
Sbjct: 382 RNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGK 440
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ EA F+++MP+E D +W LL +CRVY N+ + LA ++L L P++ +V+LSNI
Sbjct: 441 IDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNI 500
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y GRW DVA I+ M G KKLPG S++E+N+ V
Sbjct: 501 YAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGV 537
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 153/363 (42%), Gaps = 49/363 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI V+ GL+ + Y+ +I + K + A+++ D+I ++VVSWN+M + YAQN
Sbjct: 141 QIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNG 200
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKI---NALREGEELHCLVLKNGFRANIF 136
+ L +M+ L+ PN T +L + N L E L K+ N+
Sbjct: 201 RFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNV- 259
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMD----ERNVVVWTSMINGYISCGDIVSARCLFELA 192
+I +Y + A ++ +M+ E +VV S++ Y + R + + A
Sbjct: 260 ----MIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFA 315
Query: 193 PER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
+ +++L N ++ Y + +AR +F+QM +DV+SW +++S Y G +
Sbjct: 316 ERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAV 375
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F EM N+GL P+ V+VL+AC+
Sbjct: 376 AVFAEM---------------RNSGL-----------------NPDSIAFVSVLAACSHA 403
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTI 367
G LD ++ G + ++D+ + G I+ A M + D W +
Sbjct: 404 GLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPL 463
Query: 368 ISG 370
+S
Sbjct: 464 LSA 466
>gi|449459744|ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
Length = 580
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 299/565 (52%), Gaps = 40/565 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIIT----ACAQLKQMTYARKMFDKITDQNVVSWNAM 71
K QI Q++ +GL + R IT CA++ Y +++ + + +W
Sbjct: 17 KQATQIHAQILVNGLPNLESCLVRQITRSQFTCARIVS-RYLQRILHHSRNPDAFTWACA 75
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
++QN + + QM++L P+ F L++C +I G +H V K GF
Sbjct: 76 VRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIHAQVYKLGF 135
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++V TAL++ YS + A KVF EM E+NVV W S+++GY+ G++V A+ LF+
Sbjct: 136 CRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGYVKIGNLVDAQKLFDE 195
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
P +D I WN++++G+ + NM A LF QM +K SWN M+ GY N GD++ + LF
Sbjct: 196 MPVKDAISWNSMLTGFSNSGNMDRACCLFQQMGEKSSASWNAMIGGYVNCGDMKAARNLF 255
Query: 252 EEMPERN---------------------------------VFSWNGLIGGYANNGLFFEV 278
+ MP RN + S+N +I Y+ N + +
Sbjct: 256 DVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSFNAMIACYSQNSMPNKA 315
Query: 279 LDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
L+ F ML + P++ T +V+SAC +LG L + W+ Y E G + + + AL+
Sbjct: 316 LELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYMEKLGIELDDHLATALV 375
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
D+YAK G I A ++FN + +DL+ ++ +I G ++ + A+ LF EM P+ +
Sbjct: 376 DLYAKSGNINRAFELFNGLKKRDLVAYSAMIFGCGINSKAHEAIRLFKEMLRVNICPNLV 435
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T+ G+L A H GLV+EG F SM D+ + P +HYG MVDLL RAGRL EA + +
Sbjct: 436 TYAGLLTAYNHAGLVDEGYLCFSSMK-DHGLAPLADHYGIMVDLLGRAGRLEEAYELIHS 494
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP++ +A +W LL +C+++ NVEL E+A ++L +L+NIY + RW D
Sbjct: 495 MPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYRSLLANIYSSMERWDDA 554
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNE 542
R++ AM + F K+ GCS +E +E
Sbjct: 555 KRMRKAMGNKIFAKISGCSWMEQSE 579
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 273/493 (55%), Gaps = 47/493 (9%)
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
++P+ TF +LK K +L + +++H V+ +G N + LI Y + + A
Sbjct: 51 SLPSHSTFVQLLK---KRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFAR 107
Query: 156 KVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLFE--LAP------------------- 193
VF + ++W MI Y + LF LA
Sbjct: 108 IVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACS 167
Query: 194 ---------------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
E D+ + N++V+ Y M++A+++FD+MP++DVI+W
Sbjct: 168 RHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWT 227
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+++ GYA G++ + LF+ MP RN SW ++ GY + + E L F ML V
Sbjct: 228 SVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVK 287
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
PN+A +V++LSACA LGALD KW+HVY + N + + ALIDMYAKCG I+ A V
Sbjct: 288 PNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRV 347
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ + +DL+TW ++ISGL+MHG GA L F EM G PD IT +G+L C+H GLV
Sbjct: 348 FDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLV 407
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
EEGLS F M + IVP++EHYGC++DLL RAGRL A + +K MP+E D V W LL
Sbjct: 408 EEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLS 467
Query: 473 SCRVYKNVELAELALERLTELEP-KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
+CR++ +V+L E + + EL P + +V+LSN+Y +G+W+ V +++ AM G +
Sbjct: 468 ACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEG 527
Query: 532 LPGCSSIEVNEVV 544
PGCS IE++ VV
Sbjct: 528 CPGCSWIEIDGVV 540
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 198/409 (48%), Gaps = 55/409 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGY 75
+ QI QVVT GL ++ + +I + + +++AR +FD+ + WN M Y
Sbjct: 70 QIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAY 129
Query: 76 AQNEFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALR-EGEELHCLVLKNGFR 132
++ + + LF QM + +TF V +C + LR GE +H +V+K+G+
Sbjct: 130 SKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYE 189
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
++IFVG +L+ +YS + A +VF EM +R+V+ WTS++ GY G++V AR LF++
Sbjct: 190 SDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMM 249
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-------------------- 232
P R+ + W +V+GY+ R EA + F+ M D + N
Sbjct: 250 PGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQG 309
Query: 233 --------------------TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
++ YA G ++ +R+F+ + +R++ +W +I G + +
Sbjct: 310 KWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMH 369
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQ 327
GL E L F ML EG P+D T++ VL+ C+ G ++ F + ++ +
Sbjct: 370 GLGAECLWTFSEMLAEG-FKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLE 428
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
C LID+ + G +E+A + SM + D++ W ++S +HG
Sbjct: 429 HYGC----LIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHG 473
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 319/619 (51%), Gaps = 87/619 (14%)
Query: 14 TTKHL-HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWN 69
+ HL QI +Q++ +G +S ++ R+++ A ++ A+++F+ + N++ WN
Sbjct: 883 SKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWN 942
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
++ + + + ++ +M+KL + FTFP+V+++C + + + +H V++
Sbjct: 943 SILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEM 1002
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD--------------------------- 162
GF+ N+ VG L+ +Y ++ A KVF M
Sbjct: 1003 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMF 1062
Query: 163 --------ERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----------------- 197
E N+V WTS+++ + CG V LF R +
Sbjct: 1063 RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDL 1122
Query: 198 -------ILWNTIVSG----YIDVRNMI-----------EARKLFDQMPKKDVISWNTML 235
++ +V G Y+ V+N + AR LF ++ K+++SWN ++
Sbjct: 1123 AAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALI 1182
Query: 236 SGYANNGDVEECKRLF------EEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
S YA+ G +E +F +E P NV SW+ +IGG+A+ G E L+ F+RM
Sbjct: 1183 SSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQL 1242
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
+V N TI +VLS CA L AL + +H + + GN+ VGN LI+MY K G +
Sbjct: 1243 -AKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFK 1301
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
VF ++ KDLI+WNT+++G +HG G A+ F +M G PDG+TF+ +L AC+
Sbjct: 1302 EGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACS 1361
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H GLV EG F M ++ + PQ+EHY CMVDLL RAG L EA VK MP+E +A +W
Sbjct: 1362 HAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVW 1421
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
LL SCR++KN E+AE ++ L + ++++LSNIY GRW+D A+++++ +
Sbjct: 1422 GALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTK 1481
Query: 528 GFKKLPGCSSIEVNEVVML 546
G KK PG S I+V + V +
Sbjct: 1482 GLKKTPGQSWIQVKKKVYM 1500
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 184/437 (42%), Gaps = 92/437 (21%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +L+ C K + +++H ++ G + F+ ++ +Y+ + A +VF E+
Sbjct: 875 FNDLLQQCSKSHL---SQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVS 930
Query: 163 E----RNVVVWTSMINGYIS---CGDIVSARC---------------------------- 187
N+++W S++ ++ C + + C
Sbjct: 931 PIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRK 990
Query: 188 --------LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
+ E+ + ++ + N ++ Y + M +ARK+F++M + +SWNTM+SGYA
Sbjct: 991 LCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYA 1050
Query: 240 NNGDVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
N D +F M E N+ +W L+ +A G E ++ F RM G +
Sbjct: 1051 LNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRG-IGATA 1109
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
+ VLS L A D K +H Y G++ + V N+LI +Y K G + A +F
Sbjct: 1110 EALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLE 1169
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ TK++++WN +IS A G A ++F +++ E P
Sbjct: 1170 IKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYP--------------------- 1208
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM---PIEADAVIWANLLG 472
+ P + + ++ A G+ EA++ +RM ++A++V A++L
Sbjct: 1209 -----------MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLS 1257
Query: 473 SCRVYKNVELAELALER 489
C ELA L L R
Sbjct: 1258 VC-----AELAALHLGR 1269
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 295/544 (54%), Gaps = 32/544 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ T V+ SG + + A+ A K+FD++ +++V SWN + + Y Q+
Sbjct: 320 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 379
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF +MK P+ T V+ SC ++ L G+E+H ++++GF + FV +A
Sbjct: 380 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 439
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---------- 190
L+++Y +E A +VF ++ +NVV W SMI GY GD S LF
Sbjct: 440 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 499
Query: 191 --------LAPERDVIL-WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+A R V L + GYI +RN +EA D+ ++++ Y
Sbjct: 500 LTTLSSILMACSRSVNLQLGKFIHGYI-IRNRVEA----------DIFVNSSLIDLYFKC 548
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G++ + +F+ MP+ NV SWN +I GY G + E L F M G V P+ T +V
Sbjct: 549 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG-VKPDAITFTSV 607
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L AC++L L+ K +H + + + N V AL+DMYAKCG ++ A+ +FN + +D
Sbjct: 608 LPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDF 667
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
++W ++I+ HG+ AL LF +M+ + PD +TF+ IL AC+H GLV+EG YF
Sbjct: 668 VSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQ 727
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP-IEADAVIWANLLGSCRVYKNV 480
M +Y P +EHY C++DLL R GRL EA + ++R P I D + + L +C ++K +
Sbjct: 728 MIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKL 787
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+L E L E +P +P+ +++LSN+Y + +W +V ++++ +++ G KK PGCS IEV
Sbjct: 788 DLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 847
Query: 541 NEVV 544
+ +
Sbjct: 848 GKRI 851
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 249/487 (51%), Gaps = 31/487 (6%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
T G+ E+L K +HQ ++V+ GL+ + + +I A+ +F I +
Sbjct: 204 TAGSALEEL-LGKLIHQ---KIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 259
Query: 64 -NVVSWNAMFNGYAQN--------EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
++ WN + +N FHR ++ F +K P+ FT+P VLK+C +
Sbjct: 260 LDITLWNGLMAACTKNFIFIEGLEVFHR--LLHFPYLK-----PDAFTYPSVLKACSGLG 312
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ G+ +H V+K+GF ++ V ++ + +Y+ E A K+F EM ER+V W ++I+
Sbjct: 313 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 372
Query: 175 GYISCGDIVSARCLFELAP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK---- 226
Y G A LFE + D + T++S + ++ +++ ++ +
Sbjct: 373 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 432
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D + ++ Y G +E K +FE++ +NV SWN +I GY+ G ++ F+RM
Sbjct: 433 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD 492
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
EG + P T+ ++L AC+R L K++H Y N + ++ V ++LID+Y KCG I
Sbjct: 493 EEG-IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 551
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+A +VF +M ++++WN +ISG G AL +F +M+ AG PD ITF +L AC
Sbjct: 552 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 611
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+ + ++E+G + ++ + G ++D+ A+ G + EA+ ++P E D V
Sbjct: 612 SQLAVLEKG-KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVS 669
Query: 467 WANLLGS 473
W +++ +
Sbjct: 670 WTSMIAA 676
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 190/377 (50%), Gaps = 17/377 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K +H ++V SG +++ ++ + + A+++F++I +NVVSWN+M
Sbjct: 415 LERGKEIHM---ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 471
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GY+ ++ + LF +M + P T +L +C + L+ G+ +H +++N
Sbjct: 472 IAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV 531
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-- 189
A+IFV ++LI+LY I +A VF M + NVV W MI+GY+ G + A +F
Sbjct: 532 EADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD 591
Query: 190 --ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGD 243
+ + D I + +++ + + + +++ + + + + + +L YA G
Sbjct: 592 MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 651
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+E +F ++PER+ SW +I Y ++G FE L F++M + P+ T + +LS
Sbjct: 652 VDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM-QQSDAKPDKVTFLAILS 710
Query: 304 ACARLGALDFSKWV--HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT--K 359
AC+ G +D + + AEY G++ V + LID+ + G + A ++ +
Sbjct: 711 ACSHAGLVDEGCYYFNQMIAEY-GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRE 769
Query: 360 DLITWNTIISGLAMHGR 376
D+ +T+ S +H +
Sbjct: 770 DVGLLSTLFSACHLHKK 786
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 319/619 (51%), Gaps = 87/619 (14%)
Query: 14 TTKHL-HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWN 69
+ HL QI +Q++ +G +S ++ R+++ A ++ A+++F+ + N++ WN
Sbjct: 45 SKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWN 104
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
++ + + + ++ +M+KL + FTFP+V+++C + + + +H V++
Sbjct: 105 SILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEM 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER------------------------- 164
GF+ N+ VG L+ +Y ++ A KVF M R
Sbjct: 165 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMF 224
Query: 165 ----------NVVVWTSMINGYISCGDIVSARCLFELAPERDV----------------- 197
N+V WTS+++ + CG V LF R +
Sbjct: 225 RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDL 284
Query: 198 -------ILWNTIVSG----YIDVRNMI-----------EARKLFDQMPKKDVISWNTML 235
++ +V G Y+ V+N + AR LF ++ K+++SWN ++
Sbjct: 285 AAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALI 344
Query: 236 SGYANNGDVEECKRLF------EEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
S YA+ G +E +F +E P NV SW+ +IGG+A+ G E L+ F+RM
Sbjct: 345 SSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQL 404
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
+V N TI +VLS CA L AL + +H + + GN+ VGN LI+MY K G +
Sbjct: 405 -AKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFK 463
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
VF ++ KDLI+WNT+++G +HG G A+ F +M G PDG+TF+ +L AC+
Sbjct: 464 EGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACS 523
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H GLV EG F M ++ + PQ+EHY CMVDLL RAG L EA VK MP+E +A +W
Sbjct: 524 HAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVW 583
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
LL SCR++KN E+AE ++ L + ++++LSNIY GRW+D A+++++ +
Sbjct: 584 GALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTK 643
Query: 528 GFKKLPGCSSIEVNEVVML 546
G KK PG S I+V + V +
Sbjct: 644 GLKKTPGQSWIQVKKKVYM 662
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 184/437 (42%), Gaps = 92/437 (21%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +L+ C K + +++H ++ G + F+ ++ +Y+ + A +VF E+
Sbjct: 37 FNDLLQQCSKSHL---SQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVS 92
Query: 163 E----RNVVVWTSMINGYIS---CGDIVSARC---------------------------- 187
N+++W S++ ++ C + + C
Sbjct: 93 PIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRK 152
Query: 188 --------LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
+ E+ + ++ + N ++ Y + M +ARK+F++M + +SWNTM+SGYA
Sbjct: 153 LCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYA 212
Query: 240 NNGDVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
N D +F M E N+ +W L+ +A G E ++ F RM G +
Sbjct: 213 LNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRG-IGATA 271
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
+ VLS L A D K +H Y G++ + V N+LI +Y K G + A +F
Sbjct: 272 EALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLE 331
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ TK++++WN +IS A G A ++F +++ E P
Sbjct: 332 IKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYP--------------------- 370
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM---PIEADAVIWANLLG 472
+ P + + ++ A G+ EA++ +RM ++A++V A++L
Sbjct: 371 -----------MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLS 419
Query: 473 SCRVYKNVELAELALER 489
C ELA L L R
Sbjct: 420 VC-----AELAALHLGR 431
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 301/560 (53%), Gaps = 50/560 (8%)
Query: 28 SGLEKSDYITPRIITACA--QLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFHRTV 84
SGL + R++ CA ++ +A + + + N M G+ +
Sbjct: 57 SGLAAHRFPASRLLAFCALSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHA 116
Query: 85 VVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA-NIFVGTALI 142
+ LF ++ + D +P + T +K+ ++ E +HC+ K GF ++ VG AL+
Sbjct: 117 LALFRRVLR-DRLPADARTIVFAVKAATTSSS--PAEAIHCVAFKRGFIGQSVLVGNALV 173
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---------------------- 180
+Y++ ++ A K+F EM +R+VV WT++++GY G
Sbjct: 174 HMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNE 233
Query: 181 -DIVSA-----------------RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+V+A +C+ E V L N +V + + A+++FD
Sbjct: 234 VTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDG 293
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP KDV SW +M+S YA GD+E +LF+E+P RN SW+ ++ Y+ L E + F
Sbjct: 294 MPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIF 353
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH-VYAEYNGYQGNVCVGNALIDMYA 341
M+ G V P DAT+V+VLSACA+LG LD + ++ Y + + V + NA IDM+A
Sbjct: 354 NDMIAAG-VEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFA 412
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
KCG + A +F +M+ K++++WNT+I A+HG+ AL LF + K G PD IT+IG
Sbjct: 413 KCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIG 472
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
+L AC+H GLV EG +F+ M + Y I P+ EHY CM+DLL + G L EA + + MP+
Sbjct: 473 VLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVG 532
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
AD W LL +CR++ NVE+ + A ++L L+P + +V++S IY +W V I+
Sbjct: 533 ADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIR 592
Query: 522 VAMRDTGFKKLPGCSSIEVN 541
MRD G KK PGCSSIEV+
Sbjct: 593 TVMRDRGVKKNPGCSSIEVD 612
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 125/332 (37%), Gaps = 68/332 (20%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA---- 76
+ VV SG+ S + ++ + + A+++FD + ++V SW +M + YA
Sbjct: 255 VHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGD 314
Query: 77 ---------------------------QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
Q + +F M P T VL +
Sbjct: 315 LENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSA 374
Query: 110 CVKINALREGEELH-CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
C ++ L G L+ ++ + + + A I++++ + AA ++F M+++NVV
Sbjct: 375 CAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVS 434
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
W +MI + G A LF+ +A +F D
Sbjct: 435 WNTMIVAHALHGQSEEALHLFQ----------------------KFKAIGIF-----PDE 467
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYANNGLFFEVLDAFK 283
I++ +LS +++G V E + F+EM E + +I GL E + +
Sbjct: 468 ITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVAR 527
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
M V ++A +L+AC G ++ K
Sbjct: 528 SM----PVGADEAGWGALLNACRMHGNVEIGK 555
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+V+ +E + ++ I A+ + A ++F + D+NVVSWN M +A +
Sbjct: 392 IVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEA 451
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE-ELHCLVLKNGFRANIFVGTALIE 143
+ LF + K + P+ T+ VL +C + EG + + G +I+
Sbjct: 452 LHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMID 511
Query: 144 LYSTGKAIEAAYKVFGEM----DERNVVVWTSMINGYISCGDIVSARC 187
L +E A++V M DE W +++N G++ +C
Sbjct: 512 LLGKVGLLEEAFEVARSMPVGADEAG---WGALLNACRMHGNVEIGKC 556
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 292/540 (54%), Gaps = 17/540 (3%)
Query: 11 QLETTK---HLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQN 64
QLE + L+Q+ ++ S + ++ R+I T C + ++YAR +F+ I +
Sbjct: 11 QLENCRSMVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPS 70
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V WN+M GY+ + ++ + +M + P+ FTFP VLK+C + ++ G +H
Sbjct: 71 VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHG 130
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K GF N++V T L+ +Y + +VF ++ + NVV W S+I+G+++
Sbjct: 131 FVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSLISGFVNNNRFSD 190
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYAN 240
A F V TI+ V ++ + FD + +VI +++ YA
Sbjct: 191 AIEAFREMQSIGVKPNETIM-----VDLLVACGRCFDPYCQSKFEFNVILATSLIDMYAK 245
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
GD+ + LF+ MPERN+ SWN +I GY+ NG E + F ML G + P+ T +
Sbjct: 246 CGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLG-IAPDKVTFFS 304
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
V+ A G + +H Y G+ + + AL++MYAK G E+A +F ++ KD
Sbjct: 305 VIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKKMFEDLEKKD 364
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACTHMGLVEEGLSYF 419
I W +I GLA HG G ALS+F M+ G PDGIT++G+L AC+H+GLVEEG YF
Sbjct: 365 TIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIGLVEEGQRYF 424
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y + P +EHYGCMVD+L+RAGR EA VK MP++ A IW LL C +++N
Sbjct: 425 AEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTANIWGALLNGCEIHEN 484
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++LA+ ++E E +V+LSNIY GRW DV I+ +M+ KL SS+E
Sbjct: 485 LDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKLLAHSSVE 544
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 305/607 (50%), Gaps = 83/607 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV SG E ++ ++ A+ + ++++FD+I ++NVVSWNA+F+ Y Q +
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXD 237
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F V LF +M PN F+ ++ +C + G+ +H ++K G+ + F
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING------------------------ 175
AL+++Y+ + A VF ++ + ++V W ++I G
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSS 357
Query: 176 -------------------YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
Y C + AR F L PE+D+I WN I+SGY +EA
Sbjct: 358 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 417
Query: 217 RKLFDQMPKK---------------------------------------DVISWNTMLSG 237
LF +M K+ D+ N+++
Sbjct: 418 LSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 477
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y VE+ +R+FEE ++ S+ +I YA G E L F M + + P+
Sbjct: 478 YGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM-QDMELKPDRFV 536
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
++L+ACA L A + K +HV+ G+ ++ GN+L++MYAKCG I++A F+ +
Sbjct: 537 CSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT 596
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
+ +++W+ +I GLA HG G AL LF++M G P+ IT + +L AC H GLV E
Sbjct: 597 ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKL 656
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
YF+SM + P EHY CM+DLL RAG++ EAV+ V +MP EA+A +W LLG+ R++
Sbjct: 657 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIH 716
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
K+VEL A E L LEP+ V+L+NIY G+W++VA ++ MRD+ KK PG S
Sbjct: 717 KDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSW 776
Query: 538 IEVNEVV 544
IEV + V
Sbjct: 777 IEVKDKV 783
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/547 (26%), Positives = 249/547 (45%), Gaps = 88/547 (16%)
Query: 11 QLETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
Q TTK L QI + SGL I +I ++ + YARK+ D+ ++ ++VS
Sbjct: 65 QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVS 124
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W+A+ +GYAQN ++ F +M L N FTF VLK+C + LR G+++H +V+
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV 184
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIV- 183
+GF ++FV L+ +Y+ + ++F E+ ERNVV W ++ + Y+ CG+ V
Sbjct: 185 VSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVG 244
Query: 184 -----------------------------SAR------CLFELAPERDVILWNTIVSGYI 208
S+R L +L + D N +V Y
Sbjct: 245 LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSG------------------------------- 237
V ++ +A +F+++ + D++SWN +++G
Sbjct: 305 KVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDME 364
Query: 238 ------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
Y+ +E+ + F +PE+++ +WN +I GY+ E L F M
Sbjct: 365 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 424
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
EG F N T+ T+L + A L + + VH + +G+ ++ V N+LID Y KC
Sbjct: 425 HKEGIGF-NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH 483
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+E+A +F DL+++ ++I+ A +G+G AL LF EM++ PD +L A
Sbjct: 484 VEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNA 543
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C ++ E+G + Y V I +V++ A+ G + +A + E V
Sbjct: 544 CANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIV 601
Query: 466 IWANLLG 472
W+ ++G
Sbjct: 602 SWSAMIG 608
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 199/402 (49%), Gaps = 21/402 (5%)
Query: 8 HSEQLETTKHL-HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
H + LE + Q+ + ++ +E +++ ++ ++ + AR F+ + +++++
Sbjct: 340 HEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+WNA+ +GY+Q + LF +M K N T +LKS + + ++H L
Sbjct: 400 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLS 459
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K+GF ++I+V +LI+ Y +E A ++F E ++V +TSMI Y G A
Sbjct: 460 VKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEAL 519
Query: 187 CLF------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLS 236
LF EL P+R V +++++ ++ + ++L + K D+ + N++++
Sbjct: 520 KLFLEMQDMELKPDRFVC--SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVN 577
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA G +++ R F E+ ER + SW+ +IGG A +G + L F +ML EG V PN
Sbjct: 578 MYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEG-VSPNHI 636
Query: 297 TIVTVLSACARLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T+V+VL AC G + +K + E G++ +ID+ + G I AV++ N
Sbjct: 637 TLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNK 696
Query: 356 MDTK-DLITWNTIISGLAMH-----GRGAGALSLFHEMKNAG 391
M + + W ++ +H GR A + E + +G
Sbjct: 697 MPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSG 738
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 152/299 (50%), Gaps = 9/299 (3%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P ++ +L C +LR G ++H + K+G + + LI LYS + A K+
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 158 FGEMDERNVVVWTSMINGY----ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
E E ++V W+++I+GY + G +++ + L + + +++++ V+++
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 214 IEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+++ + + DV NT++ YA + + KRLF+E+PERNV SWN L Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
E + F M+ G + PN+ ++ ++++AC L K +H Y GY +
Sbjct: 234 VQXDFCGEAVGLFYEMVLSG-IKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
NAL+DMYAK G + +A+ VF + D+++WN +I+G +H AL L +MK
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +++ Y+ ++L +E E ++ SW+ LI GYA NGL L AF M G V
Sbjct: 95 NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG-V 153
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N+ T +VL AC+ + L K VH +G++G+V V N L+ MYAKC ++
Sbjct: 154 KCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKR 213
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ + +++++WN + S A+ LF+EM +G P+ + ++ ACT +
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273
Query: 412 VEEG---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G Y + D+ +VD+ A+ G LA+A+ +++ + D V W
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSA----NALVDMYAKVGDLADAISVFEKIK-QPDIVSWN 328
Query: 469 NLLGSCRVYKNVELAELALERLTELE 494
++ C ++ E E ALE L +++
Sbjct: 329 AVIAGCVLH---EHHEQALELLGQMK 351
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 19/280 (6%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+K T G L+ Q+ V SG Y+ +I + + + A ++F++
Sbjct: 440 LKSTAG-----LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 494
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
T ++VS+ +M YAQ + LF +M+ ++ P+ F +L +C ++A +G+
Sbjct: 495 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 554
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+LH +LK GF +IF G +L+ +Y+ +I+ A + F E+ ER +V W++MI G G
Sbjct: 555 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHG 614
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRN----MIEARKLFDQMPKKDVISWNTMLS 236
A LF + V + + + N + EA+ F+ M +++ + M
Sbjct: 615 HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESM--EELFGFKPMQE 672
Query: 237 GYA-------NNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
YA G + E L +MP E N W L+G
Sbjct: 673 HYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
A ++ +G P + +LS C +L +H + +G + + N LI++Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KC A + + DL++W+ +ISG A +G G GAL FHEM G + TF
Sbjct: 102 SKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 401 GILCACT 407
+L AC+
Sbjct: 162 SVLKACS 168
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 295/510 (57%), Gaps = 14/510 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ A+ ++ A+ +FD++ ++ SW A+ + +A + H LF M++ D +
Sbjct: 29 MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLI-- 86
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ I+L + + E + H + ++ TA++ + +E A + F
Sbjct: 87 --AWTIMLTVLATFSNI-EDAKYHFDQMPE---RDLVAWTAMLAANAERGQMENARETFD 140
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M ERN+ WTS+++ Y GD+ +A +F+ PE +++ W +++GY +++ A++
Sbjct: 141 QMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRA 200
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD MP++D+I+W MLS YA NG + + +F+ MPER++ SW ++ N L E
Sbjct: 201 FDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESK 260
Query: 280 DAFKRM-----LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ F RM L++G + PN T +T+L AC+ LGAL + +H G+ ++ V N
Sbjct: 261 ELFDRMPRHCALSKG-MTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSN 319
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
AL++ Y +CG + +A VF+ M +D+I+W+++IS A GR A+ L+H M + G +P
Sbjct: 320 ALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLP 379
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D I FI +L AC++ G+VE +F+S+ D + P +EHY CMVD+L RAG+L +A D
Sbjct: 380 DDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDL 439
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ MP +++ +L +C++Y +VE E A E + EL+P+N + ++ L+NIY R
Sbjct: 440 LRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRP 499
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
KD ARI+ M + G KK PGCS IEV + V
Sbjct: 500 KDAARIRKLMEERGIKKKPGCSWIEVLDRV 529
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/549 (22%), Positives = 228/549 (41%), Gaps = 122/549 (22%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD I D++ SW M + YA++ +F D MP
Sbjct: 11 ARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVF------DRMP-------------- 50
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
R ++ TAL+ ++ E A +F M ER+++ WT M
Sbjct: 51 -------------------RWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIM 91
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
+ + +I A+ F+ PERD++ W +++ + M AR+ FDQMP++++ SW
Sbjct: 92 LTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWT 151
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
++LS Y +GDV+ R+F+ MPE N+ +W ++ GY+ +G AF M
Sbjct: 152 SLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPER---- 207
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
D W A++ YA G + ++
Sbjct: 208 -------------------DLIAWT-----------------AMLSAYAFNGHLRYTREI 231
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK-----NAGEMPDGITFIGILCACT 407
F M +DLI+W T+++ L + + LF M + G P+ +TFI +L AC+
Sbjct: 232 FQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACS 291
Query: 408 HMGLVEEGLSYFQSMA---MDYSIVPQIEHYGCMVDLLARAGRLAEA---VDFVKRMPIE 461
+G + EG ++A D +V +V+ R G L +A D ++R
Sbjct: 292 FLGALAEGRKIHAAVAERGFDTDLVVS----NALVNFYGRCGALGDAKIVFDGMRRR--- 344
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
D + W++++ + V+ A R+ E P + + +S ++
Sbjct: 345 -DVISWSSMISAFAQRGRVDEAMELYHRMLS-EGTLPDDIIFISVLF------------- 389
Query: 522 VAMRDTG--------FKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNN 573
A ++G F+ + G + +E + C+ L R +R ++++L+P +
Sbjct: 390 -ACSNSGVVEASGDFFRSIVGDTQVEPT-LEHYACMVDVLGRAGKLRDAEDLLRLMPFHP 447
Query: 574 HPLTFIVVI 582
PL ++ ++
Sbjct: 448 GPLLYMTML 456
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 278/515 (53%), Gaps = 43/515 (8%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M A+++ V+ LF +++ P+ FT P+VLKS ++ + EGE++H +K G
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++ +V +L+ +Y+ +E +KVF EM ER+VV W +I+ Y+ G A +F+
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 191 LAP---------------------------------------ERDVILWNTIVSGYIDVR 211
E V N +V +
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGNALVDMFCKCG 180
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ +AR +FD M K+V W +M+SGY +NG +E + LFE P ++V W ++ GY
Sbjct: 181 CLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQ 240
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F E L+ F+ M T R+ P++ +V++L+ CA+ GAL+ KW+H Y N +
Sbjct: 241 FNRFDEALELFRCMQT-ARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKV 299
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG AL+DMYAKCG IE A+ VF M +D +W ++I GLA +G AL L++EM+N G
Sbjct: 300 VGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVG 359
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
D ITF+ +L AC+H G V EG F SM + I P+ EHY C++DLL RAG L EA
Sbjct: 360 VRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEA 419
Query: 452 VDFVKRMPIEADAV---IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
+ + +M E D ++ +LL + R Y NV++AE E+L ++E + + +L+++Y
Sbjct: 420 EELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVY 479
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
RW+DV ++ M+D G +K PGCSSIEV+ V
Sbjct: 480 ASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGV 514
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 43/378 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V +GLE Y+ ++ A L +M K+FD++ +++VVSWN + + Y +
Sbjct: 51 KVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHG 110
Query: 80 FHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ +F +M + + + T L +C + L GE ++ V+ F ++ G
Sbjct: 111 RFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTE-FEMSVRTG 169
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL++++ ++ A +F M ++NV WTSM++GY+S G AR LFE +P +DV+
Sbjct: 170 NALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVV 229
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEECK------ 248
LW +++GY+ EA +LF M + N ++L+G A G +E+ K
Sbjct: 230 LWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 289
Query: 249 -----------------------------RLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
+F EM ER+ SW LI G A NG+ L
Sbjct: 290 RENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRAL 349
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNALID 338
D + M G V +D T V VL+AC+ G + + + + E + Q + LID
Sbjct: 350 DLYYEMENVG-VRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLID 408
Query: 339 MYAKCGIIENAVDVFNSM 356
+ + G+++ A ++ + M
Sbjct: 409 LLCRAGLLDEAEELIDKM 426
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 285/508 (56%), Gaps = 12/508 (2%)
Query: 39 RIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFHRT-VVVLFTQMKKLDA 96
R++ A+ + YA K+FD + + N W ++ + + H + F +M +
Sbjct: 52 RVLHFSAEKSNLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGI 111
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
+P+ FTF +VL +C ++ A EG+++H ++++GF N V TAL+++Y+ + A
Sbjct: 112 LPSGFTFSLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARD 171
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
VF + +R+VV WT+MI GY G +V AR LF+ ER+ W T+V+GY + +M A
Sbjct: 172 VFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAA 231
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN-----GLIGGYAN 271
+L+D M KD ++W M++GY G+V E +R+F+E+ WN L+ YA
Sbjct: 232 MELYDVMNGKDEVTWVAMIAGYGKLGNVSEARRIFDEI----TVPWNPSTCAALLACYAQ 287
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG E ++ +++M ++ D +V +SACA+L + S + E +
Sbjct: 288 NGHAREAIEMYEKM-RRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHI 346
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V NALI M +KCG I+ A FN M +DL T++ +I+ A HG+ A+ LF +M+ G
Sbjct: 347 VSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEG 406
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF+G+L AC+ GL+EEG +FQ M Y I P EHY CMVDLL RAG+L +A
Sbjct: 407 LKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKA 466
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+K ADA W +LL +CRVY NVEL E+A L E++P + N+V+L+N Y
Sbjct: 467 YSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASN 526
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+W+ +K M G KK G S I+
Sbjct: 527 DKWECAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 163/402 (40%), Gaps = 90/402 (22%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++V SG + + ++ A+ + AR +FD I D++VV+W AM GYA+
Sbjct: 136 QVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAG 195
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF M GE N F T
Sbjct: 196 RMVDARFLFDNM---------------------------GER------------NSFTWT 216
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
++ Y+ ++AA +++ M+ ++ V W +MI GY G++ AR +F + +
Sbjct: 217 TMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAGYGKLGNVSEARRIF----DEITVP 272
Query: 200 WN-----TIVSGYIDVRNMIEARKLFDQMPKKDV-------------------------- 228
WN +++ Y + EA +++++M + +
Sbjct: 273 WNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSL 332
Query: 229 -------------ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
I N ++ + G+++ R F M R++++++ +I +A +G
Sbjct: 333 TYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKS 392
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGN 334
+ +D F +M EG + PN T V VL+AC+ G ++ ++ + E G +
Sbjct: 393 QDAIDLFLKMQQEG-LKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYT 451
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
++D+ + G +E A + T D TW ++++ ++G
Sbjct: 452 CMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYG 493
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ ++ +I ++ + A + F+ + ++++ +++AM +A++ + + LF +
Sbjct: 342 EKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLK 401
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVGTALIELYSTGK 149
M++ PN TF VL +C + EG ++ + G T +++L
Sbjct: 402 MQQEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAG 461
Query: 150 AIEAAYKVFGE-MDERNVVVWTSM-----INGYISCGDIVSARCLFELAPERD---VILW 200
+E AY + E + W S+ + G + G+I +AR LFE+ P V+L
Sbjct: 462 QLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEI-AARHLFEIDPTDSGNYVLLA 520
Query: 201 NTIVS 205
NT S
Sbjct: 521 NTYAS 525
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 286/512 (55%), Gaps = 40/512 (7%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
K+ A ++FDK+ D++V+SWN+M +GY N + ++ QM L + T VL
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
C L G+ +H L +K+ F I L+++YS ++ A +VF +M ERNVV
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 168 VWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIV-----SGYI----DVRNMI 214
WTSMI GY G A L + + DV+ +I+ SG + DV + I
Sbjct: 319 SWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+A + + ++ N ++ YA G +E +F M +++ SWN +I
Sbjct: 379 KANNM-----ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------- 425
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
G + P+ T+ VL ACA L AL+ K +H Y NGY + V N
Sbjct: 426 --------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
AL+D+Y KCG++ A +F+ + +KDL++W +I+G MHG G A++ F+EM++AG P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ++FI IL AC+H GL+E+G +F M D++I P++EHY CMVDLL+R G L++A +F
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF 591
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ +PI DA IW LL CR Y ++ELAE ER+ ELEP+N +V+L+NIY + +W
Sbjct: 592 IETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKW 651
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
++V R++ + G +K PGCS IE+ V L
Sbjct: 652 EEVKRLREKIGKQGLRKNPGCSWIEIKGKVNL 683
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 199/422 (47%), Gaps = 57/422 (13%)
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE 118
+ D V +NA + Q + L KK + T+ VL+ C + + +
Sbjct: 60 RTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTD 117
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
G+++H ++ N + +G L+ Y+T ++ +VF M+++NV +W M++ Y
Sbjct: 118 GKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 179 CGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
GD + CLF++ E+ I+ + A +LFD++ +DVISWN+M+SGY
Sbjct: 178 IGDFKESICLFKIMVEKG-----------IEGKRPESAFELFDKLCDRDVISWNSMISGY 226
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+NG + ER L +K+M+ G + + ATI
Sbjct: 227 VSNG-----------LTERG--------------------LGIYKQMMYLG-IDVDLATI 254
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
++VL CA G L K VH A + ++ + N L+DMY+KCG ++ A+ VF M
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 314
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL-- 416
+++++W ++I+G GR GA+ L +M+ G D + IL AC G ++ G
Sbjct: 315 RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 374
Query: 417 -SYFQSMAMDYSIVPQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
Y ++ M+ ++ + C ++D+ A+ G + EA + V + D + W ++G
Sbjct: 375 HDYIKANNMESNL------FVCNALMDMYAKCGSM-EAANSVFSTMVVKDIISWNTMIGE 427
Query: 474 CR 475
+
Sbjct: 428 LK 429
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 169/388 (43%), Gaps = 63/388 (16%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A+S L K +H + + S E+ + ++ ++ + A ++F+K+ ++NVV
Sbjct: 262 ANSGTLSLGKAVHSL---AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW +M GY ++ + L QM+K + +L +C + +L G+++H +
Sbjct: 319 SWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI------NGYISCG 180
N +N+FV AL+++Y+ ++EAA VF M ++++ W +MI + ++C
Sbjct: 379 KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMAC- 437
Query: 181 DIVSARCLFELAPER---------------DVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
V C A ER D + N +V Y+ + AR LFD +P
Sbjct: 438 --VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
KD++SW M++GY + GY N E + F M
Sbjct: 496 KDLVSWTVMIAGYG--------------------------MHGYGN-----EAIATFNEM 524
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKC 343
G + P++ + +++L AC+ G L+ W Y N + + + ++D+ ++
Sbjct: 525 RDAG-IEPDEVSFISILYACSHSGLLE-QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582
Query: 344 GIIENAVDVFNSMD-TKDLITWNTIISG 370
G + A + ++ D W ++ G
Sbjct: 583 GNLSKAYEFIETLPIAPDATIWGALLCG 610
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 260/439 (59%), Gaps = 12/439 (2%)
Query: 118 EGEELHCLVLKNGFRA--NIFVGTALIELYSTGKAIEAAYKVFGEM------DERNVVVW 169
G H +++ N F + NIF AL++ +S A F + +
Sbjct: 71 HGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTF 130
Query: 170 TSMINGYISCGDIVSAR---CLF-ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
TS++ ++ + C + E ++ + N++V Y V A+KLFD+M
Sbjct: 131 TSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVV 190
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+DV+SWNT++SGY +G V++ + +F+ M E+N+ SW+ +I GYA N + + ++ F++M
Sbjct: 191 RDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQM 250
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
EG + PND T+V+VLSACA LGALD KW+H + N + + +GNAL DMYAKCG
Sbjct: 251 QHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGC 310
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ A VF+ M +D+I+W+ II GLAM+G A + F EM G P+ I+F+G+L A
Sbjct: 311 VLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTA 370
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
CTH GLV++GL YF M Y I P+IEHYGC+VDLL+RAGRL +A + MP++ + +
Sbjct: 371 CTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVI 430
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
+W LLG CR+YK+ E E + R+ EL+ + + V L+N+Y +GR D A ++ MR
Sbjct: 431 VWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMR 490
Query: 526 DTGFKKLPGCSSIEVNEVV 544
D K PGCS IE+N V
Sbjct: 491 DNKSMKTPGCSWIEINNSV 509
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 192/408 (47%), Gaps = 56/408 (13%)
Query: 14 TTKHLHQIQTQVVTSGLEKSD--YITPRIITACAQLKQMTYARKMFDK-ITDQNVVSWNA 70
+ + L +IQ Q++ S + D I + I + + ++ +F+ ++ N+ ++NA
Sbjct: 36 SMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNC--FTFPIVLKSCVKINALREGEELHCLVLK 128
+ ++Q+ T + F L PN +TF VLK+C + + EG+++HC V K
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTK 155
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G +N+FV +L++LY A K+F EM R+VV W ++I+GY G + AR +
Sbjct: 156 YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMV 215
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK---------------------- 226
F+ E++++ W+T++SGY +A +LF QM +
Sbjct: 216 FDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGA 275
Query: 227 -DVISW-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
D+ W N + YA G V E K +F EM ER+V SW+ +I G
Sbjct: 276 LDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMG 335
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEY 323
A G E + F M+ +G + PND + + +L+AC G +D F VY
Sbjct: 336 LAMYGYANEAFNFFAEMIEDG-LEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGIT 394
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISG 370
+ CV +D+ ++ G ++ A + NSM + ++I W ++ G
Sbjct: 395 PKIEHYGCV----VDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 252/381 (66%), Gaps = 3/381 (0%)
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
F+ P+ + ++ N++V Y+ ++ +A ++F++M ++D +SWNT++SG+ G + +
Sbjct: 118 FKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRAR 177
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+FEE+ ++ +FSW ++ GYA G L+ F+RM + ++ ++V+VL ACA+L
Sbjct: 178 AIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVD-IELDEISLVSVLPACAQL 236
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
GAL+ KW+H+YA+ G+ ++CV NALI++YAK G ++ +F+ M+ +D+I+W+T+I
Sbjct: 237 GALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMI 296
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
GLA HGR A+ LF EM+ A P+ ITF+G+L AC H GL+ EGL YF+SM D +I
Sbjct: 297 VGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNI 356
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P +EHYGC+V+LL +GRL +A++ +K+MP++ D+ IW L SCR + N+E+ +A+E
Sbjct: 357 EPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAME 416
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGC 548
L ELEP + N++ LSN+Y DLG+W V+R++ M K PGCSSIEV+ +V
Sbjct: 417 HLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQE-- 474
Query: 549 LSRELDRKSIVRAEANMIKLL 569
+ D K +A ++KLL
Sbjct: 475 YASGDDSKPFSKAIYRVLKLL 495
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 185/407 (45%), Gaps = 53/407 (13%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +I VV L S ++ +++ C + YA +F ++ D N +NAM Y
Sbjct: 4 LKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYKH 63
Query: 78 NEFHRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N+ + + + QM + P+ FTFP V+K C + G+++H K G +
Sbjct: 64 NKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFGPK 123
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+N + +L+E+Y +++ A++VF EM ER+ V W ++I+G++ G + AR +FE
Sbjct: 124 SNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEL 183
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPK--------------------------- 225
++ + W IVSGY + A + F +M
Sbjct: 184 QDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELGK 243
Query: 226 ------------KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+D+ N ++ YA G ++E +RLF +M ER+V SW+ +I G AN+G
Sbjct: 244 WIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVGLANHG 303
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
E ++ F+ M + +V PN T V +LSACA G L+ Y E N+ G
Sbjct: 304 RAREAIELFQEM-QKAKVEPNIITFVGLLSACAHAGLLNEGLG---YFESMERDDNIEPG 359
Query: 334 ----NALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
L+++ G ++ A+++ M K D W + S HG
Sbjct: 360 VEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHG 406
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT----EGRVFPND 295
++G+ E LF+ + + N F +N +I Y +N ++ + K+ML E FP+
Sbjct: 32 HHGETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDK 91
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T V+ CA L + K VH +A G + N + N+L++MY KC +++A VF
Sbjct: 92 FTFPFVVKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEE 151
Query: 356 MDTKDLITWNT-------------------------------IISGLAMHGRGAGALSLF 384
M +D ++WNT I+SG A G A AL F
Sbjct: 152 MTERDAVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFF 211
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
M+ D I+ + +L AC +G +E G + A + I ++++ A+
Sbjct: 212 RRMQMVDIELDEISLVSVLPACAQLGALELG-KWIHIYADKAGFLRDICVCNALIEVYAK 270
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLL 471
G + E +M E D + W+ ++
Sbjct: 271 RGSMDEGRRLFHKMN-ERDVISWSTMI 296
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 274/521 (52%), Gaps = 30/521 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
++ A A+ M AR++FD++ +N SWN M G+ F VV + DAMP
Sbjct: 138 LLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGF----FAAGQVV--KALDVFDAMPA 191
Query: 99 -NCFTFPIVLKSCVKINALREGEEL-----------------HCLVLKNGFRANIFVGTA 140
+ + ++ K L E EEL + L++ G
Sbjct: 192 KDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKR 251
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L ++ G+ K G ERNVV W SM+ YI GD+ SAR LF P++D++ W
Sbjct: 252 LFDMIPKGQYQHNMLKRKGF--ERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSW 309
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
NT++SGY +M E+ KLF +MP D +SWN ++ G+ G+ E + F+ MPER
Sbjct: 310 NTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTI 369
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN +I GY NG + + F +ML G + P+ T +VL+ACA + L +H
Sbjct: 370 SWNTMISGYEKNGNYISSVKLFSKMLEVGEI-PDRHTFSSVLAACASIPMLGLGAQIHQL 428
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAG 379
E + + + NALI MY++CG + +A +F M TK DL++WN +I HGR
Sbjct: 429 VE-KSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATK 487
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL LF EM+ A MP ITF+ +L AC + GLV EG F +M +Y IV +IEHY +V
Sbjct: 488 ALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALV 547
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
+L+ R G+L +A++ + MP+ D +W LG+C KN LA++A + L+ + P + A
Sbjct: 548 NLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSA 607
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+V++ N++ G+W A ++ M G K PG S I++
Sbjct: 608 PYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDL 648
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 180/411 (43%), Gaps = 80/411 (19%)
Query: 158 FGEMDERNVVVWTSMINGYISC---GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
F M R+ V W +++ Y + + +AR LF+ P+RDV+ WNT++ Y M
Sbjct: 90 FDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMD 149
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
EAR+LFD+MP+++ SWNTM++G+ G V + +F+ MP ++ S + ++ G+ NG+
Sbjct: 150 EARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGM 209
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK----------WVHVYAEYN 324
E + + L+ + T++ A + G +K + H +
Sbjct: 210 LHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRK 269
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL------------- 371
G++ NV N+++ Y K G + +A +FN M KDL++WNT+ISG
Sbjct: 270 GFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLF 329
Query: 372 -----------------------AMHGRG--------------------------AGALS 382
A H RG ++
Sbjct: 330 WEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVK 389
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF +M GE+PD TF +L AC + ++ G Q ++ S VP ++ +
Sbjct: 390 LFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQ--LVEKSFVPDTAISNALITMY 447
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+R G L +A K+M + D V W L+G C Y++ A AL+ E+
Sbjct: 448 SRCGALNDAEAIFKQMHTKKDLVSWNALIG-C--YEHHGRATKALQLFKEM 495
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR+LFD +P + V++WN++L+G A D + F+ MP R+ SWN L+ Y+ +
Sbjct: 55 ARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASP-H 113
Query: 276 FEVLDAFKRMLTEGRVFPNDATIV--TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
+ L A +R+ E P + T+L A AR G +D ++ ++ E Q N
Sbjct: 114 PDHLAAARRLFDE---MPQRDVVTWNTLLGAYARRGLMDEAR--RLFDEMP--QRNAASW 166
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
N ++ + G + A+DVF++M KD + +T++SG +G
Sbjct: 167 NTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNG 208
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 10/232 (4%)
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
V+ N L+ G +RLF+ +P R+V +WN L+ G A + F M
Sbjct: 36 VMRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPV 95
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
V N T++ SA L ++ ++ E Q +V N L+ YA+ G+++
Sbjct: 96 RDAVSWN--TLLAAYSASPHPDHLAAAR--RLFDEMP--QRDVVTWNTLLGAYARRGLMD 149
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A +F+ M ++ +WNT+++G G+ AL +F M D + ++ T
Sbjct: 150 EARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAK----DSASLSTMVSGFT 205
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
G++ E + ++ Y ++ +AGR ++A +P
Sbjct: 206 KNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIP 257
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 319/619 (51%), Gaps = 87/619 (14%)
Query: 14 TTKHL-HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVVSWN 69
+ HL QI +Q++ +G +S ++ R+++ A ++ A+++F+ + N++ WN
Sbjct: 45 SKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWN 104
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
++ + + + ++ +M+KL + FTFP+V+++C + + + +H V++
Sbjct: 105 SILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEM 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD--------------------------- 162
GF+ N+ VG L+ +Y ++ A KVF M
Sbjct: 165 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMF 224
Query: 163 --------ERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----------------- 197
E N+V WTS+++ + CG V LF R +
Sbjct: 225 RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDL 284
Query: 198 -------ILWNTIVSG----YIDVRNMI-----------EARKLFDQMPKKDVISWNTML 235
++ +V G Y+ V+N + AR LF ++ K+++SWN ++
Sbjct: 285 AAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALI 344
Query: 236 SGYANNGDVEECKRLF------EEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
S YA+ G +E +F +E P NV SW+ +IGG+A+ G E L+ F+RM
Sbjct: 345 SSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQL 404
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
+V N TI +VLS CA L AL + +H + + GN+ VGN LI+MY K G +
Sbjct: 405 -AKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFK 463
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
VF ++ KDLI+WNT+++G +HG G A+ F +M G PDG+TF+ +L AC+
Sbjct: 464 EGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACS 523
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H GLV EG F M ++ + PQ+EHY CMVDLL RAG L EA VK MP+E +A +W
Sbjct: 524 HAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVW 583
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
LL SCR++KN E+AE ++ L + ++++LSNIY GRW+D A+++++ +
Sbjct: 584 GALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTK 643
Query: 528 GFKKLPGCSSIEVNEVVML 546
G KK PG S I+V + V +
Sbjct: 644 GLKKTPGQSWIQVKKKVYM 662
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 184/437 (42%), Gaps = 92/437 (21%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +L+ C K + +++H ++ G + F+ ++ +Y+ + A +VF E+
Sbjct: 37 FNDLLQQCSKSHL---SQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF-EVS 92
Query: 163 E----RNVVVWTSMINGYIS---CGDIVSARC---------------------------- 187
N+++W S++ ++ C + + C
Sbjct: 93 PIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRK 152
Query: 188 --------LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
+ E+ + ++ + N ++ Y + M +ARK+F++M + +SWNTM+SGYA
Sbjct: 153 LCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYA 212
Query: 240 NNGDVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
N D +F M E N+ +W L+ +A G E ++ F RM G +
Sbjct: 213 LNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRG-IGATA 271
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
+ VLS L A D K +H Y G++ + V N+LI +Y K G + A +F
Sbjct: 272 EALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLE 331
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ TK++++WN +IS A G A ++F +++ E P
Sbjct: 332 IKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYP--------------------- 370
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM---PIEADAVIWANLLG 472
+ P + + ++ A G+ EA++ +RM ++A++V A++L
Sbjct: 371 -----------MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLS 419
Query: 473 SCRVYKNVELAELALER 489
C ELA L L R
Sbjct: 420 VC-----AELAALHLGR 431
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/430 (39%), Positives = 263/430 (61%), Gaps = 20/430 (4%)
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
ALR+ + + A++ +I Y +E+A +VF EM RN V W++M+
Sbjct: 4 ALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVG 63
Query: 175 GYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
GY + G++ AR +F+ P R+V+ WN++V+G+ + ARK+FD+MP ++++SWN
Sbjct: 64 GYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWN 123
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
ML GY+ N D++ + LF+ MPE++V SW +I GYA G + + L+ F+ M TE V
Sbjct: 124 AMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQ 183
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYA---------EYNGYQGNVCVGNALIDMYAKC 343
PN+ T+V+VLSACA L AL+ +WVH + EYN +G ALIDMYAKC
Sbjct: 184 PNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYN-------LGAALIDMYAKC 236
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G + AV +FNS+D K++ WN +I+ LAM+G ++ F +MK GE P+ ITF+G+L
Sbjct: 237 GRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVL 296
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC+H GLV+EG FQSMA + P+++HYGCMVD+L RAG L EA + ++ MP+ D
Sbjct: 297 TACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPD 356
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSNIYGDLGRWKDVARIK 521
+++ LLG+CR++K ++AE + L + V++S+IY G+W DV +
Sbjct: 357 VMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEAR 416
Query: 522 VAMRDTGFKK 531
++ +G +K
Sbjct: 417 QVVQRSGIRK 426
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 58/410 (14%)
Query: 176 YISCGDIVSARCLF-ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
Y + D S R +F A DV+ WNT++ GY+ M A+++FD+MP+++ +SW+TM
Sbjct: 2 YGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTM 61
Query: 235 LSGYANNGDVEECKRLFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+ GYA G+++ + +F+ MP RNV +WN ++ G+A +GL F M
Sbjct: 62 VGGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVR---- 117
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
N+ NA++ Y+ ++ A ++
Sbjct: 118 ------------------------------------NLVSWNAMLRGYSVNSDMDGAREL 141
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGL 411
F+ M KD+++W +ISG A GR L LF M+ + P+ +T + +L AC ++
Sbjct: 142 FDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTA 201
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
+EEG + + + +V E+ ++D+ A+ GR AV + + W
Sbjct: 202 LEEG-RWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLD-RKNVSAWNA 259
Query: 470 LLGSCRVYKNVELAELALERLTEL-EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
L+ + N + A E++ E N FV + G + R
Sbjct: 260 LITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRC-------- 311
Query: 529 FKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTF 578
F+ + ++ EV GC+ L R ++ +I+ +P + F
Sbjct: 312 FQSMASTCGVQ-PEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVF 360
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 159/381 (41%), Gaps = 82/381 (21%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I + +M A+++FD++ +N VSW+ M GYA +F +M
Sbjct: 30 VIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM-------- 81
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
P + ++ V N++ G H L + A K+F
Sbjct: 82 ----PAIGRNVVTWNSMVTGFARHGL-------------------------LPLARKMFD 112
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
EM RN+V W +M+ GY D+ AR LF++ PE+DV+ W ++SGY + +L
Sbjct: 113 EMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLEL 172
Query: 220 FDQMPKKDVISWN-----TMLSGYANNGDVEE---------------------------- 246
F M + + N ++LS AN +EE
Sbjct: 173 FRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDM 232
Query: 247 ---CKR------LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
C R +F + +NV +WN LI A NG + +DAF++M G PND T
Sbjct: 233 YAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEK-PNDIT 291
Query: 298 IVTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
V VL+AC+ G +D + A G Q V ++DM + G++E A ++ SM
Sbjct: 292 FVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSM 351
Query: 357 D-TKDLITWNTIISGLAMHGR 376
D++ + ++ MH R
Sbjct: 352 PMAPDVMVFGALLGACRMHKR 372
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 290/535 (54%), Gaps = 21/535 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V G + + ++ ++ + ++ YARK+FDK+ D++ V WN M G +N
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ V +F M + T VL + ++ ++ G + CL LK GF + +V T
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG 244
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI ++S + ++ A +FG + + ++V + ++I+G+ G+ A F R++++
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYF-----RELLVS 299
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG--------------YANNGDVEE 246
VS V +I F + I + SG Y+ +++
Sbjct: 300 GQRVSSSTMV-GLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDL 358
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
++LF+E E+ V +WN +I GYA +GL + F+ M+T PN TI ++LSACA
Sbjct: 359 ARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTT-EFTPNPVTITSILSACA 417
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+LGAL F K VH + + N+ V ALIDMYAKCG I A +F+ K+ +TWNT
Sbjct: 418 QLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNT 477
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I G +HG G AL LF+EM + G P +TF+ +L AC+H GLV EG F +M Y
Sbjct: 478 MIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKY 537
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P EHY CMVD+L RAG+L +A++F+++MP+E +W LLG+C ++K+ LA +A
Sbjct: 538 RIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVA 597
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ERL EL+P N +V+LSNIY + A ++ A++ K PGC+ IEVN
Sbjct: 598 SERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVN 652
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 208/469 (44%), Gaps = 20/469 (4%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL + Q++ +G + ++ + +AR +F + ++ +N +
Sbjct: 20 TFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIK 79
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G++ + ++ +K P+ FT+ + + N G LH + +GF +
Sbjct: 80 GFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDS 136
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI-SCGDIVSARCLFELA 192
N+FV +AL++LY + A KVF +M +R+ V+W +MI G + +C S + ++
Sbjct: 137 NLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMV 196
Query: 193 PERDVILWNTIVSGYIDVRNMIEAR----------KLFDQMPKKDVISWNTMLSGYANNG 242
+ + T+ + V M E + KL D ++S ++
Sbjct: 197 AQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHF---DDYVLTGLISVFSKCE 253
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
DV+ + LF + + ++ S+N LI G++ NG + F+ +L G+ + +T+V ++
Sbjct: 254 DVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRV-SSSTMVGLI 312
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
+ G L + + + +G V AL +Y++ I+ A +F+ K +
Sbjct: 313 PVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVA 372
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
WN +ISG A G A+SLF EM P+ +T IL AC +G + G S Q +
Sbjct: 373 AWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ-L 431
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++ I ++D+ A+ G ++EA + E + V W ++
Sbjct: 432 IKSKNLEQNIYVSTALIDMYAKCGNISEASQLFD-LTSEKNTVTWNTMI 479
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 301/546 (55%), Gaps = 27/546 (4%)
Query: 25 VVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHR 82
+V +GL + + R+I CA + + + Y K+ I + N SWN G++++E +
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 83 TVVVLFTQMKK---LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V+ + QM + ++ P+ FT+P++ K C + G + V K V
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHN 120
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A I ++++ +E A KVF E R++V W +INGY G+ A ++++ V
Sbjct: 121 ASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKP 180
Query: 200 WNTIVSGYIDVRNMI----EARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKR-- 249
+ + G + M+ ++ ++ + + + N ++ ++ GD+ E +R
Sbjct: 181 DDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIF 240
Query: 250 -----------LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
LF++M E++V WN +IGG + L F+ M T P++ T+
Sbjct: 241 DNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTS-NTDPDEITM 299
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+ LSAC++LGALD W+H Y E + NV +G +L+DMYAKCG I A+ VF+ + T
Sbjct: 300 IHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQT 359
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
++ +T+ II GLA+HG + A+S F+EM +AG PD ITFIG+L AC H G+++ G Y
Sbjct: 360 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 419
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F M +++ PQ++HY MVDLL RAG L EA ++ MP+EADA +W LL CR++
Sbjct: 420 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHG 479
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
NV+L E A ++L EL+P + +V+L +YG+ W+D R + M + G +K+PGCSSI
Sbjct: 480 NVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 539
Query: 539 EVNEVV 544
EVN +V
Sbjct: 540 EVNGIV 545
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 168/399 (42%), Gaps = 62/399 (15%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
H I V LE ++ I A +M ARK+FD+ +++VSWN + NGY +
Sbjct: 101 HMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKI 160
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ ++ M+ P+ T ++ SC + L G+E + V NG R I +
Sbjct: 161 GEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLA 220
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL++++S I A ++F +++R +V LF+ E+DV+
Sbjct: 221 NALMDMFSKCGDIHEARRIFDNLEKRTIVSK------------------LFDDMEEKDVV 262
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK----------------------DVISW----- 231
+WN ++ G + + +A LF +M DV W
Sbjct: 263 MWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYI 322
Query: 232 ------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
+++ YA G++ E +F + RN ++ +IGG A +G +
Sbjct: 323 EKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAI 382
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WVHVYAEYNGYQGNVCVGNALI 337
F M+ G + P++ T + +LSAC G + + + + + +N + + ++
Sbjct: 383 SYFNEMIDAG-IAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN-LNPQLKHYSIMV 440
Query: 338 DMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
D+ + G++E A + SM + D W ++ G MHG
Sbjct: 441 DLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHG 479
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 300/521 (57%), Gaps = 23/521 (4%)
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ H + VL +++ L F +LK C I L++ +H ++K + F
Sbjct: 36 HDSCHGWIYVLEMKLRALKIREMEDMFVPILKDCPNIVELKK---IHAHIVKFSLSQSSF 92
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA---P 193
+ T ++++ + E A +F + + N ++ +MI Y V A +++ P
Sbjct: 93 LVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNP 152
Query: 194 E-RDVILWNTIVSGYI----------DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+ I + ++ D+ + +F K + + N+++ Y
Sbjct: 153 HGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGH-VFKFGQKSNTVVENSLVEMYVKCD 211
Query: 243 DVEECKRLFEEMPERN--VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
+++ R+FEEM ER+ +FSW ++ GYA G + + L+ F+RM G + P++ ++V+
Sbjct: 212 SLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVG-IEPDEISLVS 270
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
VL CA+LGAL+ KW+H+YA+ G+ N+CV NALI+MYAKCG I+ +F+ M +D
Sbjct: 271 VLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERD 330
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+I+W+T+I GLA HGR A+ LF EM+ A P ITF+G+L AC H GL+ EGL YF+
Sbjct: 331 VISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFE 390
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
SM DY+I P +EHYGC+V+LL +GRL +A++ VK+MP + D+ IW +LL SCR + N+
Sbjct: 391 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNL 450
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
++A +A+E L ELEP + N+V+LSN+Y DLG+W V+R++ MR KK PGCSSIEV
Sbjct: 451 KIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEV 510
Query: 541 NEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVV 581
+ +V + D K +A ++KLL + + I+V
Sbjct: 511 DNMVQE--FASGDDSKPFSKAICRVLKLLVMHQSKIIEIMV 549
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 54/352 (15%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +I +V L +S ++ +++ C + YA +F + D N +NAM Y
Sbjct: 75 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKH 134
Query: 78 NEFHRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N+ + + ++ QM + P+ FTFP V+KSC + G+++H V K G +
Sbjct: 135 NKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 194
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV--WTSMINGYISCGDIVSARCLFE 190
+N V +L+E+Y +++ A++VF EM ER+ + WT++++GY G A F
Sbjct: 195 SNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFR 254
Query: 191 ------LAPE---------------------------------RDVILWNTIVSGYIDVR 211
+ P+ R++ + N ++ Y
Sbjct: 255 RMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCG 314
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP----ERNVFSWNGLIG 267
++ + R+LFDQM ++DVISW+TM+ G AN+G E LF+EM E ++ ++ GL+
Sbjct: 315 SIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLT 374
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFP---NDATIVTVLSACARLG-ALDFSK 315
A+ GL E L F+ M + + P + +V +L RL AL+ K
Sbjct: 375 ACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVK 426
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 46/306 (15%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQ 77
Q+ V G + + + ++ + + A ++F+++T D + SW A+ +GYA+
Sbjct: 183 QVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYAR 242
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ + F +M+ + P+ + VL C ++ AL G+ +H K GF NI V
Sbjct: 243 IGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICV 302
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
ALIE+Y+ +I+ ++F +M ER+V+ W++MI G + G AR
Sbjct: 303 CNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHG---RAR----------- 348
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEE 253
EA +LF +M K +I++ +L+ A+ G + E R FE
Sbjct: 349 -----------------EAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFES 391
Query: 254 MP-----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
M E V + L+ +G + L+ K+M + P+ ++LS+C
Sbjct: 392 MKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRK----PDSPIWGSLLSSCRSH 447
Query: 309 GALDFS 314
G L +
Sbjct: 448 GNLKIA 453
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 291/497 (58%), Gaps = 8/497 (1%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNE--FHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
M A +F K+ ++VV+W + +G+++N + + + M+ + PN FTF V+
Sbjct: 220 MDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVV 279
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
++C ++ L G +H L++K G + +G AL+E Y +AI+ A +V + +
Sbjct: 280 RACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLN 339
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
S+I G IS G I A +F E + + +N ++ GY M ++++LF++MP +
Sbjct: 340 ALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRT 399
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
+ S NTM+S Y+ NG++++ LFEE E++ +WN +I GY ++G + +A K +
Sbjct: 400 IFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSG---QPEEALKLYI 456
Query: 287 TEGR--VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
T R + +T + AC+ LG+L + +H + ++ NV VG +LIDMY+KCG
Sbjct: 457 TMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCG 516
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
I A F S+ + ++ W +I+G A HG G+ A+SLF M G P+G TF+G+L
Sbjct: 517 SIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLS 576
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+ GLV EG+ F SM YS+ P +EHY C+VDLL R+G + EA +F+K+MP+EAD
Sbjct: 577 ACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADG 636
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
V+W LL +C + ++E+ E E++ +PK +++V+LSNIY LGRW++ ++ +
Sbjct: 637 VVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKIL 696
Query: 525 RDTGFKKLPGCSSIEVN 541
R KK PGCS IE+N
Sbjct: 697 RGFKVKKDPGCSWIELN 713
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 192/440 (43%), Gaps = 71/440 (16%)
Query: 33 SDYITPRI-ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM 91
S+ I+ I I+ A+ ++ AR++FD++ + VVSWN M + Y+++ + L M
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129
Query: 92 KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
+ + TF VL C ++ LR+G+ +HCLVLK+G + VG+AL+ Y++ I
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 189
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
A +VF + RN V+W+ M+ GY++C + A +F P RDV+ W T++
Sbjct: 190 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLI------- 242
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
SG++ NGD C + E
Sbjct: 243 ------------------------SGFSKNGD--GCGKALE------------------- 257
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
F+ M+ G PN+ T V+ AC RLG L + VH G + +
Sbjct: 258 ---------MFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPS 308
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+G AL++ Y +C I++A+ V + L N++I GL GR A +F+ M
Sbjct: 309 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMN 368
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+ + G G +++ F+ M I M+ + +R G + +A
Sbjct: 369 PVSYNLMIKGYAVG----GQMDDSKRLFEKMP-----CRTIFSSNTMISVYSRNGEIDKA 419
Query: 452 VDFVKRMPIEADAVIWANLL 471
++ + E D V W +++
Sbjct: 420 LELFEETKNEKDPVTWNSMI 439
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 46/264 (17%)
Query: 49 QMTYARKMFDKI--------------------------------TDQNVVSWNAMFNGYA 76
QM ++++F+K+ +++ V+WN+M +GY
Sbjct: 384 QMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYI 443
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ + L+ M +L TF + +C + +L++G+ LH ++K F +N++
Sbjct: 444 HSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVY 503
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
VGT+LI++YS +I A F + NV WT++ING+ G A LF+ E+
Sbjct: 504 VGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQG 563
Query: 197 VILWNTIVSGYIDVRNMI----EARKLFDQMPKKDVISWNTMLSGYA-------NNGDVE 245
+ G + + E K+F M + S L YA +G +
Sbjct: 564 LAPNGATFVGVLSACSRAGLVNEGMKIFHSMER--CYSVTPTLEHYACVVDLLGRSGHIR 621
Query: 246 ECKRLFEEMP-ERNVFSWNGLIGG 268
E + ++MP E + W L+
Sbjct: 622 EAEEFIKKMPLEADGVVWGALLSA 645
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 323 YNGYQGN---VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
Y +Q N + N I YAK ++ A +F+ M + +++WNT+IS + HGR +
Sbjct: 62 YTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSE 121
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
AL L + M + TF +L C + + +G
Sbjct: 122 ALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDG 157
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 15/225 (6%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H I+T E + Y+ +I ++ + A+ F I NV +W A+ NG+A
Sbjct: 490 HAHLIKTP-----FESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHA 544
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANI 135
+ + LF M + PN TF VL +C + + EG ++ H + +
Sbjct: 545 YHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTL 604
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGY-----ISCGDIVSARCL- 188
+++L I A + +M E + VVW ++++ + G+ V+ +
Sbjct: 605 EHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFS 664
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFD--QMPKKDVISW 231
F+ P ++ + I +G R + RK+ ++ K SW
Sbjct: 665 FDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSW 709
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 295/544 (54%), Gaps = 32/544 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ T V+ SG + + A+ A K+FD++ +++V SWN + + Y Q+
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF +MK P+ T V+ SC ++ L G+E+H ++++GF + FV +A
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---------- 190
L+++Y +E A +VF ++ +NVV W SMI GY GD S LF
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307
Query: 191 --------LAPERDVIL-WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+A R V L + GYI +RN +EA D+ ++++ Y
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYI-IRNRVEA----------DIFVNSSLIDLYFKC 356
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G++ + +F+ MP+ NV SWN +I GY G + E L F M G V P+ T +V
Sbjct: 357 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG-VKPDAITFTSV 415
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L AC++L L+ K +H + + + N V AL+DMYAKCG ++ A+ +FN + +D
Sbjct: 416 LPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDF 475
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
++W ++I+ HG+ AL LF +M+ + PD +TF+ IL AC+H GLV+EG YF
Sbjct: 476 VSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQ 535
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP-IEADAVIWANLLGSCRVYKNV 480
M +Y P +EHY C++DLL R GRL EA + ++R P I D + + L +C ++K +
Sbjct: 536 MIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKL 595
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+L E L E +P +P+ +++LSN+Y + +W +V ++++ +++ G KK PGCS IEV
Sbjct: 596 DLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 655
Query: 541 NEVV 544
+ +
Sbjct: 656 GKRI 659
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 248/486 (51%), Gaps = 30/486 (6%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ- 63
T S+ L+ K +HQ ++V+ GL+ + + +I A+ +F I +
Sbjct: 12 TCIDSKYLKQGKLIHQ---KIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 64 NVVSWNAMFNGYAQN--------EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
++ WN + +N FHR ++ F +K P+ FT+P VLK+C +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHR--LLHFPYLK-----PDAFTYPSVLKACSGLGR 121
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
+ G+ +H V+K+GF ++ V ++ + +Y+ E A K+F EM ER+V W ++I+
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISC 181
Query: 176 YISCGDIVSARCLFELAP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----D 227
Y G A LFE + D + T++S + ++ +++ ++ + D
Sbjct: 182 YYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALD 241
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+ ++ Y G +E K +FE++ +NV SWN +I GY+ G ++ F+RM
Sbjct: 242 GFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDE 301
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG + P T+ ++L AC+R L K++H Y N + ++ V ++LID+Y KCG I
Sbjct: 302 EG-IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIG 360
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
+A +VF +M ++++WN +ISG G AL +F +M+ AG PD ITF +L AC+
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ ++E+G + ++ + G ++D+ A+ G + EA+ ++P E D V W
Sbjct: 421 QLAVLEKG-KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSW 478
Query: 468 ANLLGS 473
+++ +
Sbjct: 479 TSMIAA 484
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 190/377 (50%), Gaps = 17/377 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE K +H ++V SG +++ ++ + + A+++F++I +NVVSWN+M
Sbjct: 223 LERGKEIHM---ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 279
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GY+ ++ + LF +M + P T +L +C + L+ G+ +H +++N
Sbjct: 280 IAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV 339
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-- 189
A+IFV ++LI+LY I +A VF M + NVV W MI+GY+ G + A +F
Sbjct: 340 EADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD 399
Query: 190 --ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGD 243
+ + D I + +++ + + + +++ + + + + + +L YA G
Sbjct: 400 MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 459
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V+E +F ++PER+ SW +I Y ++G FE L F++M + P+ T + +LS
Sbjct: 460 VDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM-QQSDAKPDKVTFLAILS 518
Query: 304 ACARLGALDFSKWV--HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT--K 359
AC+ G +D + + AEY G++ V + LID+ + G + A ++ +
Sbjct: 519 ACSHAGLVDEGCYYFNQMIAEY-GFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRE 577
Query: 360 DLITWNTIISGLAMHGR 376
D+ +T+ S +H +
Sbjct: 578 DVGLLSTLFSACHLHKK 594
>gi|356498888|ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 552
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/505 (33%), Positives = 290/505 (57%), Gaps = 5/505 (0%)
Query: 39 RIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFH-RTVVVLFTQMKKLDA 96
+++ + + YA ++FD + + + W ++ ++ H + +++M +
Sbjct: 49 QVLRCTGEKTNLCYAHQLFDTMPNCPSSFLWTSLIRALLSHQAHLHHCISTYSRMHQNGV 108
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
+P+ FTF +L +C ++ AL EG+++H V+++GF N V TAL+++Y+ I A
Sbjct: 109 LPSGFTFSSILSACGRVPALFEGKQVHARVMQSGFHGNKIVQTALLDMYAKSGCISDARA 168
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
VF MD+R+VV WT+M+ GY G +V A+ LF+ ER+ W +V+GY + +M A
Sbjct: 169 VFDGMDDRDVVAWTAMVCGYAKVGMMVDAQWLFDKMGERNSFTWTAMVAGYANCEDMKTA 228
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLF 275
+KL+D M K+ ++W M++GY G+V E +R+F+ +P + + ++ YA +G
Sbjct: 229 KKLYDVMNDKNEVTWVAMIAGYGKLGNVREARRVFDGIPVPQGASACAAMLACYAQHGYA 288
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
E +D +++M E ++ + +V +SACA+L + S + + E V A
Sbjct: 289 KEAIDMYEKM-REAKIKITEVAMVGAISACAQLRDIRMSNTLTGHLEEGCCDRTHIVSTA 347
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
LI M++KCG I A+ F +M +D+ T++ +I+ A HG+ A+ LF +M+ G P+
Sbjct: 348 LIHMHSKCGNINLALSEFTTMRYRDVYTYSAMIAAFAEHGKSQDAIDLFLKMQKEGLKPN 407
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
+TFIG+L AC G +EEG +FQ M + I P EHY C+VDLL +AG+L A D +
Sbjct: 408 QVTFIGVLNACGSSGYIEEGCRFFQIMTGVFGIEPLPEHYTCIVDLLGKAGQLERAYDLI 467
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
K+ ADA W +LL +CR+Y NVEL E+A L E++P++ N+V+L+N Y +W+
Sbjct: 468 KQNASSADATTWGSLLATCRLYGNVELGEIAARHLFEIDPEDSGNYVLLANTYASKDKWE 527
Query: 516 DVARIKVAMRDTGFKKLP-GCSSIE 539
+K + + G KK P G SSI+
Sbjct: 528 HAQEVKKLISEKGMKKKPSGYSSIQ 552
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 165/398 (41%), Gaps = 82/398 (20%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +V+ SG + + ++ A+ ++ AR +FD + D++VV+W AM GYA+
Sbjct: 133 QVHARVMQSGFHGNKIVQTALLDMYAKSGCISDARAVFDGMDDRDVVAWTAMVCGYAKVG 192
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF +M GE N F T
Sbjct: 193 MMVDAQWLFDKM---------------------------GER------------NSFTWT 213
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP-ERDVI 198
A++ Y+ + ++ A K++ M+++N V W +MI GY G++ AR +F+ P +
Sbjct: 214 AMVAGYANCEDMKTAKKLYDVMNDKNEVTWVAMIAGYGKLGNVREARRVFDGIPVPQGAS 273
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDV-------------------ISWNTMLSGYA 239
+++ Y EA ++++M + + I + L+G+
Sbjct: 274 ACAAMLACYAQHGYAKEAIDMYEKMREAKIKITEVAMVGAISACAQLRDIRMSNTLTGHL 333
Query: 240 NNGDVE--------------ECKRL------FEEMPERNVFSWNGLIGGYANNGLFFEVL 279
G + +C + F M R+V++++ +I +A +G + +
Sbjct: 334 EEGCCDRTHIVSTALIHMHSKCGNINLALSEFTTMRYRDVYTYSAMIAAFAEHGKSQDAI 393
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALID 338
D F +M EG + PN T + VL+AC G ++ ++ + G + ++D
Sbjct: 394 DLFLKMQKEG-LKPNQVTFIGVLNACGSSGYIEEGCRFFQIMTGVFGIEPLPEHYTCIVD 452
Query: 339 MYAKCGIIENAVDVF-NSMDTKDLITWNTIISGLAMHG 375
+ K G +E A D+ + + D TW ++++ ++G
Sbjct: 453 LLGKAGQLERAYDLIKQNASSADATTWGSLLATCRLYG 490
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 285/532 (53%), Gaps = 39/532 (7%)
Query: 14 TTKHLHQIQTQVVTSGLEKS--DYITPRIITACAQLK-QMTYARKMFDKITDQNVVSWNA 70
+ + + QI +V G+ + ++ +++ A + +M YARK+FD I ++ NA
Sbjct: 10 SPRAVRQIHGHLVVGGIAAARLQHLRELLLSCVATFRGRMGYARKVFDGIPRPDLFMHNA 69
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA ++ +M + + P+ FTF +L++C + R G ++H V+K
Sbjct: 70 MVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVHGAVVKL 129
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF + +V ALI +++ CGD+ A L
Sbjct: 130 GFLKDAYVRNALINMFA-------------------------------KCGDLRVASVLL 158
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ A E DV+ W+ +++G+ +M ARK+FD+ KD++ WN ML YA +G++E +
Sbjct: 159 DEAGEGDVVAWSAVIAGHAARGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARE 218
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+ PE++V SWN +I GYA G+ L+ F M G P++ATIV++LS CA G
Sbjct: 219 LFDRAPEKDVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWT-PDEATIVSLLSCCANTG 277
Query: 310 ALDFSKWVH--VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LD + +H ++ E + ++ VGNAL+ MYAKCG + AV+ FN+M D+ TWN++
Sbjct: 278 LLDAGRMIHHQLHLERRPWI-SIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSV 336
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I GLA HG+ ++ F +M P+ I+F+ +L AC+H GLVE+G +F M Y
Sbjct: 337 IGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYG 396
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P HY C+VD+L RAG L EA V M E AV+W LLG+CR + N+ L +L
Sbjct: 397 IEPNARHYSCIVDMLGRAGLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVR 456
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
E+L + A++V+LS IY G W V + +M G +K G + I+
Sbjct: 457 EKLLNMNEDASADYVLLSGIYASSGEWLGVETERRSMDRRGIRKAAGYAQID 508
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 298/532 (56%), Gaps = 22/532 (4%)
Query: 30 LEKSDYITPRIITACAQLKQMT-------YARKMFDKITDQNVVSWNAMFNGYAQNEFHR 82
L K+ Y + CA + T AR +FDK+ +N+V+W M Y+Q
Sbjct: 171 LLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLD 230
Query: 83 TVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
V LF ++ + P+ FT +L +CV++ G++LH V+++G +++FVG L+
Sbjct: 231 DAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLV 290
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERD 196
++Y+ A+E + K+F M NV+ WT++I+GY+ A LF + P +
Sbjct: 291 DMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTP--N 348
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFE 252
+++++ + + ++L Q K + + N++++ YA +G +E ++ F
Sbjct: 349 CFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFN 408
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ E+N+ S+N N + ++F + V + T +LS A +G +
Sbjct: 409 ILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIV 465
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ +H +G+ N+C+ NALI MY+KCG E A+ VFN M +++ITW +IISG A
Sbjct: 466 KGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFA 525
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG AL LF+EM G P+ +T+I +L AC+H+GL++E +F SM ++SI P++
Sbjct: 526 KHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRM 585
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHY CMVDLL R+G L EA++F+ MP +ADA++W LGSCRV++N +L E A +++ E
Sbjct: 586 EHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILE 645
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EP +PA +++LSN+Y GRW DVA ++ +M+ K G S IEV+ V
Sbjct: 646 REPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQV 697
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 199/428 (46%), Gaps = 33/428 (7%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVV 66
S LE K LH +++ SGL + +IT ++ A +F + +++V
Sbjct: 52 SGNLELGKLLHH---KLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLV 108
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDA---MPNCFTFPIVLKSCVKINALREGEELH 123
SW+A+ + +A N ++ F M + PN + F +L+SC G +
Sbjct: 109 SWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIF 168
Query: 124 CLVLKNG-FRANIFVGTALIELYSTGKA-IEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+LK G F +++ VG ALI++++ G I++A VF +M +N+V WT MI Y G
Sbjct: 169 AFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGL 228
Query: 182 IVSARCLF------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISW 231
+ A LF E P++ + +++S +++ ++L + + DV
Sbjct: 229 LDDAVDLFCRLLVSEYTPDKFTL--TSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVG 286
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
T++ YA + VE +++F M NV SW LI GY + E + F ML G V
Sbjct: 287 CTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNML-HGHV 345
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
PN T +VL ACA L K +H G CVGN+LI+MYA+ G +E A
Sbjct: 346 TPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARK 405
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGAL----SLFHEMKNAGEMPDGITFIGILCACT 407
FN + K+LI++NT A AL S HE+++ G T+ +L
Sbjct: 406 AFNILFEKNLISYNTAADA------NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAA 459
Query: 408 HMGLVEEG 415
+G + +G
Sbjct: 460 CIGTIVKG 467
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 22/264 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ-- 77
Q+ Q + GL + + +I A+ M ARK F+ + ++N++S+N + A+
Sbjct: 370 QLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKAL 429
Query: 78 ---NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
F+ V + + A P FT+ +L I + +GE++H L++K+GF N
Sbjct: 430 DSDESFNHEV-----EHTGVGASP--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN 482
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----E 190
+ + ALI +YS EAA +VF +M RNV+ WTS+I+G+ G A LF E
Sbjct: 483 LCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLE 542
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVE 245
+ + + + + ++S V + EA K F+ M IS + M+ +G +
Sbjct: 543 IGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLL 602
Query: 246 ECKRLFEEMP-ERNVFSWNGLIGG 268
E MP + + W +G
Sbjct: 603 EAIEFINSMPFDADALVWRTFLGS 626
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM--DT 358
+L AC R G L+ K +H +G + + N+LI +Y+KCG ENA+ +F +M
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE---MPDGITFIGILCACTHMGLVEEG 415
+DL++W+ IIS A + + AL F M P+ F +L +C++ G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 416 LSYF 419
L+ F
Sbjct: 165 LAIF 168
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 293/532 (55%), Gaps = 39/532 (7%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+A ++FD + +++VVSWN M + +Q+ R + + M+ + T+ L +C
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
++++LR G++LH V++N + +V +AL+ELY+ + A VF + +RN V WT
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 172 MINGYISCG-----------------------------------DIVSARCLFELAPE-- 194
+I+G++ G D+ R L L +
Sbjct: 342 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401
Query: 195 --RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ V++ N+++S Y N+ A +F M +KD++SW +M++ Y+ G+V + + F+
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 461
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M E+NV +WN ++G Y +G + L +K ML+E V P+ T VT+ CA LGA
Sbjct: 462 GMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANK 521
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ G + V NA+I MY+KCG I A VF+ ++ KD+++WN +I+G +
Sbjct: 522 LGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS 581
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G A+ +F ++ G PD I+++ +L C+H GLV+EG YF M ++I P +
Sbjct: 582 QHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGL 641
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH+ CMVDLL RAG L EA D + MP++ A +W LL +C+++ N ELAELA + + E
Sbjct: 642 EHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFE 701
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ + ++++++ IY D G+ D A+I+ MRD G KK PG S +EV+ V
Sbjct: 702 LDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKV 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 195/443 (44%), Gaps = 51/443 (11%)
Query: 34 DYITPRIIT------ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVL 87
D P +IT A+L +++ A ++F ++ ++V SWN + +GY Q+ + +
Sbjct: 65 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 124
Query: 88 FTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
F M + D+ PN FT +KSC + +L +V K + + V AL++++
Sbjct: 125 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 184
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
A++ A ++F + E + SM+ GY+ + A LF+ PERDV+ WN +VS
Sbjct: 185 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 207 YIDVRNMIEARKLFDQMPKKDV-------------------ISWNTMLSG---------- 237
+ EA + M K V + W L
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 304
Query: 238 ----------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
YA +G +E K +F + +RN +W LI G+ G F E ++ F +M
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
E A + T++S C L + +H +G V V N+LI MYAKC ++
Sbjct: 365 ELMTLDQFA-LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQ 423
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
+A +F M+ KD+++W ++I+ + G A A F M + IT+ +L A
Sbjct: 424 SAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE----KNVITWNAMLGAYI 479
Query: 408 HMGLVEEGLSYFQSMAMDYSIVP 430
G E+GL ++ M + + P
Sbjct: 480 QHGAEEDGLRMYKVMLSEEYVRP 502
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 185/410 (45%), Gaps = 49/410 (11%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L + + Q+ QV+ + Y+ ++ A+ A+ +F+ + D+N V+W
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ +G+ Q V LF QM+ + F ++ C L G +LH L LK+G
Sbjct: 342 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ V +LI +Y+ +++A +F M+E+++V WTSMI Y G++ AR F+
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 461
Query: 191 LAPERDVILWNTIVSGYI------DVRNMIE--------------------------ARK 218
E++VI WN ++ YI D M + A K
Sbjct: 462 GMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANK 521
Query: 219 LFDQMPKK--------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
L DQ+ + D N +++ Y+ G + E +++F+ + +++ SWN +I GY+
Sbjct: 522 LGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS 581
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G+ + ++ F +L G P+ + V VLS C+ G + K+ Y + N+
Sbjct: 582 QHGMGKQAIEIFDDILKRG-AKPDYISYVAVLSGCSHSGLVQEGKF---YFDMMKRAHNI 637
Query: 331 CVG----NALIDMYAKCGIIENAVDVFNSMDTKDLI-TWNTIISGLAMHG 375
G + ++D+ + G + A D+ + M K W ++S +HG
Sbjct: 638 SPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG 687
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLF-DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V L NT++ Y+ + +AR+L + +VI+ N ML+GYA G + + LF MP
Sbjct: 39 VFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP 98
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
R+V SWN L+ GY + + L+ F M G +PN T+ + +C LG +
Sbjct: 99 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 158
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE---------------------------- 347
+ + Q + V AL+DM+ +CG ++
Sbjct: 159 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 218
Query: 348 ---NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
+A+++F+SM +D+++WN ++S L+ GR AL + +M++ G D T+ L
Sbjct: 219 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 278
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEA 451
AC + + G Q A +P I+ Y +V+L A++G EA
Sbjct: 279 ACARLSSLRWGK---QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEA 324
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 183/464 (39%), Gaps = 77/464 (16%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-STGKAIEAAYKVFGE 160
F L+SC AL LH ++ G + +F+ L+ Y S G +A + +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+ NV+ M+NGY G + A LF P RDV WNT++SGY R + + + F
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 221 DQMPKK-----------------DVISWNT-----------------------MLSGYAN 240
M + + W++ ++ +
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185
Query: 241 NGDVEECKRLFEEMPERNVF-------------------------------SWNGLIGGY 269
G V+ RLF + E +F SWN ++
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
+ +G E LD M ++G V + T + L+ACARL +L + K +H N +
Sbjct: 246 SQSGRVREALDMVVDMQSKG-VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 304
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V +AL+++YAK G + A VFNS+ ++ + W +ISG +G ++ LF++M+
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364
Query: 390 AGEMPDGITFIGILCA-CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
D ++ C+ M L S+ + + + ++ + A+ L
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLG--RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
++ + + R E D V W +++ + NV A + ++E
Sbjct: 423 -QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 465
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/503 (36%), Positives = 275/503 (54%), Gaps = 40/503 (7%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
++++ + + FD++ D+++VSWN M GY + F+++ PN ++ ++
Sbjct: 181 EEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPS----PNVISWVNLV 236
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+ + E EL + + N+ L+ Y +EAAY +F EM E+N +
Sbjct: 237 NGYCQAGRMGEARELFDRMPER----NVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSI 292
Query: 168 VWTSMINGYISCG------DIVS-------------------------ARCLFELAPERD 196
WT+M++G++ G D++S AR LF+ RD
Sbjct: 293 SWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRD 352
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ WNT++SGY+ + EA LF QMP KD+ISWNTM++G A G + + +F +M
Sbjct: 353 AVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKR 412
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN SWN +I G+ NGLF E L F M + + + T LSA A L L +
Sbjct: 413 RNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKS-ADWCTYACCLSASANLATLQIGRQ 471
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
H G+ + GNALI YAKCG + A VF+ M +D+++WN +I G A +G
Sbjct: 472 FHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGN 531
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
G+ +++F EM+ PD IT + +L AC+H GL++EGL +F SM YS+ P EHY
Sbjct: 532 GSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYT 591
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CMVDLL RAGRL EA + V+ M I+ +A +W LLG+CRV+KN E+A LA E+L ELEP
Sbjct: 592 CMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPC 651
Query: 497 NPANFVMLSNIYGDLGRWKDVAR 519
+N+V+LSNI + G+W D +
Sbjct: 652 KASNYVLLSNICVEAGKWDDADK 674
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 198/418 (47%), Gaps = 53/418 (12%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+++A A ++ AR++FD++ +N VSWN M +Q+ LF DAMP
Sbjct: 48 MVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLF------DAMPA 101
Query: 99 -NCFTFPIVLKSCVKINALREGEEL-------HCLVLKN----GFRANIFVGTALIELYS 146
N +++ I++ V+ L EL C N G+ N A+ L
Sbjct: 102 RNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Query: 147 -----------------TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
+ I + + F EM ++++V W M+ GY+ GD+ A F
Sbjct: 162 MPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFF 221
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
P +VI W +V+GY M EAR+LFD+MP+++V++WN +LSGY VE
Sbjct: 222 SRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYN 281
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF EMPE+N SW ++ G+ +G E D +M ++ N ++ +
Sbjct: 282 LFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSD-----NVGAKTALMHGYLKSN 336
Query: 310 ALDFSKWVHVYAEYNG--YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+D ++ + ++G + VC N +I Y +CG+++ A+ +F M KD+I+WNT+
Sbjct: 337 LIDDARQL-----FDGIVVRDAVC-WNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTM 390
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
I+G A G+ A S+F +MK + +++ I+ GL E L +F M D
Sbjct: 391 IAGCAQGGQIRKAASIFRKMKRR----NTVSWNSIISGFVQNGLFVEALQHFMLMRRD 444
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 207/441 (46%), Gaps = 20/441 (4%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS-WNAMFNGYAQNEFHRTVVVLFTQ 90
+++Y +++ + ++T AR++ D++ + + +N M +GYA+N + L +
Sbjct: 102 RNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQE 161
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M P+ ++ VL ++ + + ++ ++E Y
Sbjct: 162 MPA----PDIVSWNSVLGGLIRNEEISRSVQF----FDEMPDKDLVSWNLMLEGYVRAGD 213
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ A F + NV+ W +++NGY G + AR LF+ PER+V+ WN ++SGY+
Sbjct: 214 LDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQF 273
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ A LF +MP+K+ ISW TM+SG+ +G ++E K + +MP NV + L+ GY
Sbjct: 274 SQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYL 333
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+ L + R L +G V + T++S + G LD + + ++ + ++
Sbjct: 334 KSNLIDDA-----RQLFDGIVVRDAVCWNTMISGYVQCGMLDEA--MVLFQQMP--NKDM 384
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N +I A+ G I A +F M ++ ++WN+IISG +G AL F M+
Sbjct: 385 ISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRD 444
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
+ D T+ L A ++ ++ G F S+ + + ++ A+ GR+ E
Sbjct: 445 AKSADWCTYACCLSASANLATLQIG-RQFHSLLVRTGFISDSSPGNALISAYAKCGRMLE 503
Query: 451 AVDFVKRMPIEADAVIWANLL 471
A M ++ D V W L+
Sbjct: 504 ARQVFDEMVVQ-DIVSWNALI 523
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 24/330 (7%)
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
FR+N L L +G+ + AA ++F EM RNVV + +M++ G + AR LF+
Sbjct: 12 FRSN----QELTSLARSGQ-LAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFD 66
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R+ + WNT++ + +AR LFD MP ++ SW M+S Y G++ + L
Sbjct: 67 EMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLAREL 126
Query: 251 FEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+ MP E+ +N +I GYA NG F + + + M P+ + +VL R
Sbjct: 127 LDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPA-----PDIVSWNSVLGGLIR-- 179
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ S+ V + E ++ N +++ Y + G ++ A F+ + + ++I+W +++
Sbjct: 180 NEEISRSVQFFDEMP--DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVN 237
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G GR A LF M + + + +L VE + F M SI
Sbjct: 238 GYCQAGRMGEARELFDRMPER----NVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSI- 292
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ MV R+G+L EA D + +MP
Sbjct: 293 ----SWTTMVSGFVRSGKLQEAKDVLSKMP 318
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I CAQ Q+ A +F K+ +N VSWN++ +G+ QN + F M++ +
Sbjct: 390 MIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSAD 449
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L + + L+ G + H L+++ GF ++ G ALI Y+ + A +VF
Sbjct: 450 WCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFD 509
Query: 160 EMDERNVVVWTSMINGYISCGD 181
EM +++V W ++I+GY S G+
Sbjct: 510 EMVVQDIVSWNALIDGYASNGN 531
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 154/389 (39%), Gaps = 89/389 (22%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
EK+ +++ + ++ A+ + K+ NV + A+ +GY ++ LF
Sbjct: 288 EKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDG 347
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+ DA+ C+ ++ V+ L E ++ + ++ +I + G
Sbjct: 348 IVVRDAV--CWN--TMISGYVQCGMLDEA----MVLFQQMPNKDMISWNTMIAGCAQGGQ 399
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILW------ 200
I A +F +M RN V W S+I+G++ G V A F L A D +
Sbjct: 400 IRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSA 459
Query: 201 -----------------------------NTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
N ++S Y M+EAR++FD+M +D++SW
Sbjct: 460 SANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSW 519
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ GYA+NG+ E +F EM AN+ V
Sbjct: 520 NALIDGYASNGNGSEVIAVFREME--------------ANS------------------V 547
Query: 292 FPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
P++ T+V VLSAC+ G +D F+ + +Y+ + C ++D+ + G +
Sbjct: 548 RPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTC----MVDLLGRAGRL 603
Query: 347 ENAVDVFNSMDTK-DLITWNTIISGLAMH 374
A ++ M + + W ++ +H
Sbjct: 604 REAFELVQGMQIQPNAGVWGALLGACRVH 632
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L T + Q + +V +G +I+A A+ +M AR++FD++ Q++VSW
Sbjct: 460 SANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSW 519
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NA+ +GYA N V+ +F +M+ P+ T +VL +C + EG ++K
Sbjct: 520 NALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIK 579
Query: 129 -NGFRANIFVGTALIELYS-TGKAIEAAYKVFGEMDERNVVVWTSMI-------NGYISC 179
+ T +++L G+ EA V G + N VW +++ N I+
Sbjct: 580 LYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIA- 638
Query: 180 GDIVSARCLFELAP 193
++A LFEL P
Sbjct: 639 --WLAAEKLFELEP 650
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 285/546 (52%), Gaps = 66/546 (12%)
Query: 2 KDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQ---LKQMTYARKMFD 58
K T ++ T L QIQ+ + + K Y +II+ A + YA ++F
Sbjct: 11 KKTISLLDQKGLTISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFL 70
Query: 59 KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE 118
+ +++ WN M + + L+ M + + +PN FTF V+++C+ + L+
Sbjct: 71 CLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQM 130
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
G H V+K G+ + FV +I+ Y +
Sbjct: 131 GLCFHGQVVKFGWESYDFVQNG-------------------------------LIHLYAN 159
Query: 179 CGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
CG ++D+ AR +FD K+DV++W ++SGY
Sbjct: 160 CG--------------------------FMDL-----ARNMFDMSIKRDVVTWTCLISGY 188
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
N+G V + LF+ MPE+N SW LI GY G F E L+ F M G N A+I
Sbjct: 189 LNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRL-NRASI 247
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V L+ACA LGALD +W+H Y + + + +G ALIDMYAKCG IE A VF+ MD
Sbjct: 248 VGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDD 307
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+D+ + +ISGLA H + A+ LF+ M++ G +P+ +TF+ +L AC+ MG+V+EGL
Sbjct: 308 RDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRI 367
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+SM+ Y I PQI+HYGC+VDLL RAG++ EA V+ MP++ D+ LL +CRV+
Sbjct: 368 FESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHG 427
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+V+L E ++ L + + V+LSN+Y +W+D ++I+ M D +KLPGCSSI
Sbjct: 428 DVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSI 487
Query: 539 EVNEVV 544
EVN V
Sbjct: 488 EVNGTV 493
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 312/564 (55%), Gaps = 11/564 (1%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
E + Q+QTQ++ G + + ++ + + ++ A ++F ++ + + VS+NAM
Sbjct: 163 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMI 222
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY+++ V LF +M+ P FTF VL + + ++ + G+++H V+K F
Sbjct: 223 TGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFV 282
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-- 190
N+FV AL++ YS ++ A K+F EM E++ V + +I+GY G A LF
Sbjct: 283 WNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFREL 342
Query: 191 --LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDV 244
A +R + T++S + + R++ Q +++ N+++ YA G
Sbjct: 343 QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKF 402
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
EE + +F + R+ W +I Y G + E L F +M + V + AT ++L A
Sbjct: 403 EEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM-RQASVIADQATFASLLRA 461
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
A + +L K +H + +G+ NV G+AL+D+YAKCG I++AV F M +++++W
Sbjct: 462 SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSW 521
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +IS A +G L F EM +G PD ++F+G+L AC+H GLVEEGL +F SM
Sbjct: 522 NAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQ 581
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
Y + P+ EHY +VD+L R+GR EA + MPI+ D ++W+++L +CR++KN ELA
Sbjct: 582 IYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELAR 641
Query: 485 LALERLTELEP-KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NE 542
A ++L +E ++ A +V +SNIY G+W++V+++ AMRD G KKLP S +E+ +E
Sbjct: 642 RAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHE 701
Query: 543 VVMLGCLSRELDRKSIVRAEANMI 566
M R + +R + +M+
Sbjct: 702 THMFSANDRCHPQIEEIRKKIDML 725
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 135/268 (50%), Gaps = 5/268 (1%)
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N V ++ + +AR+LF++MP K+ +S N M+SGY +G++ E ++LF+ M ER
Sbjct: 56 NFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAV 115
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W LIGGY+ F E + F +M G P+ T VT+LS C + V
Sbjct: 116 TWTILIGGYSQLNQFKEAFELFVQMQRCG-TEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 174
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
GY + VGN L+D Y K ++ A +F M D +++N +I+G + G A
Sbjct: 175 IIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKA 234
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL-SYFQSMAMDYSIVPQIEHYGCMV 439
++LF EM+N+G P TF +LCA ++GL + L S + + V + ++
Sbjct: 235 VNLFVEMQNSGLKPTEFTFAAVLCA--NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALL 292
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIW 467
D ++ + +A MP E D V +
Sbjct: 293 DFYSKHDSVIDARKLFDEMP-EQDGVSY 319
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 166/372 (44%), Gaps = 55/372 (14%)
Query: 126 VLKNGF-----RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
++K GF R+N VG L + A ++F +M +N V MI+GY+ G
Sbjct: 43 IVKTGFDPDTSRSNFRVGNFL-----KNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG 97
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLS 236
++ AR LF+ ER + W ++ GY + EA +LF QM + D +++ T+LS
Sbjct: 98 NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 157
Query: 237 G-----------------------------------YANNGDVEECKRLFEEMPERNVFS 261
G Y + ++ +LF+EMPE + S
Sbjct: 158 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVS 217
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHV 319
+N +I GY+ +GL + ++ F M G + P + T VL CA +G D + +H
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEMQNSG-LKPTEFTFAAVL--CANIGLDDIVLGQQIHS 274
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+ + NV V NAL+D Y+K + +A +F+ M +D +++N IISG A G+
Sbjct: 275 FVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKY 334
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A LF E++ F +L ++ E G + + + +I +V
Sbjct: 335 AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ-IHAQTIVTTADSEILVGNSLV 393
Query: 440 DLLARAGRLAEA 451
D+ A+ G+ EA
Sbjct: 394 DMYAKCGKFEEA 405
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 293/522 (56%), Gaps = 16/522 (3%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
+++ ++ +L + A+ +FD++ +N VSW AM GYA + + LF QM L
Sbjct: 154 FVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM--L 211
Query: 95 DAMP---NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
P N F VL + L G ++H LV+K+G + V +L+ +Y+ +
Sbjct: 212 GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCM 271
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA-----PERDVILWNTIVSG 206
+AA+ VF ERN + W++MI GY G+ SA +F P + L +++
Sbjct: 272 DAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVG-VLNA 330
Query: 207 YIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
DV ++E ++ M K V + ++ YA G + + K F + E ++ W
Sbjct: 331 CSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLW 390
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
++ G+ NG F + L + RM EG VFPN TI ++L ACA L AL+ K +H
Sbjct: 391 TAMVTGHVQNGEFEQALMLYARMDKEG-VFPNTLTITSLLRACAGLAALEPGKQLHTQIL 449
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
G+ VG+AL MY+KCG +E+ + VF M +D+I WN+IISG + +GRG A++
Sbjct: 450 KFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAIN 509
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF EMK G PD +TFI +LCAC+HMGLV+ G +YF+SM DY + P+++HY CMVD+L
Sbjct: 510 LFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDIL 569
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
+RAG L+EA DF++ + I+ +W +LG+CR ++ ++ A E+L +L + A ++
Sbjct: 570 SRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYI 629
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+LSNIY +W DV R++ M+ G K PGCS +E+N V
Sbjct: 630 LLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRV 671
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 174/347 (50%), Gaps = 12/347 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV G+ + ++T A+ M A +F+ ++N ++W+AM GY+QN
Sbjct: 241 QVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNG 300
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V +F+QM P FT VL +C + L EG++ H L++K GF ++V +
Sbjct: 301 NAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKS 360
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL+++Y+ I A + F + E ++V+WT+M+ G++ G+ A L+ + V
Sbjct: 361 ALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFP 420
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPKKDV---ISWNTMLSG-YANNGDVEECKRLF 251
+ +++ + + ++L Q+ K S + LS Y+ G++E+ +F
Sbjct: 421 NTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVF 480
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP R+V +WN +I G++ NG + ++ F+ M EG P+ T + VL AC+ +G +
Sbjct: 481 RRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTA-PDPVTFINVLCACSHMGLV 539
Query: 312 DFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKCGIIENAVDVFNSM 356
D W + + Y + + ++D+ ++ G++ A D S+
Sbjct: 540 D-RGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESI 585
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 196/423 (46%), Gaps = 21/423 (4%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLF---TQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
++V SWN++ N + HR + L + + +P+ +F + + ++ G
Sbjct: 80 RDVASWNSLLNPLSH---HRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAG 136
Query: 120 EELHCLVLK-NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
+H L K +N+FV TAL+ +Y I A VF EM RN V W +M+ GY +
Sbjct: 137 AVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAA 196
Query: 179 CGDIVSARCLF-----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW-- 231
A LF E ++ + ++S + ++ + K ++ +
Sbjct: 197 RKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVS 256
Query: 232 --NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
N++++ YA G ++ +FE ERN +W+ +I GY+ NG + F +M G
Sbjct: 257 VENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAG 316
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
P + T+V VL+AC+ +G L K H G++ V V +AL+DMYAKCG I +A
Sbjct: 317 -FPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDA 375
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+ FN D++ W +++G +G AL L+ M G P+ +T +L AC +
Sbjct: 376 KECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGL 435
Query: 410 GLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
+E G + Q + + + + + + ++ G L + + +RMP D + W
Sbjct: 436 AALEPGKQLHTQILKFGFGLGASVG--SALSTMYSKCGNLEDGMVVFRRMP-HRDVIAWN 492
Query: 469 NLL 471
+++
Sbjct: 493 SII 495
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 250 LFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+F ++P R+V SWN L+ +++ L F+ ML+ + P+ + +A AR
Sbjct: 71 VFADIPAAARDVASWNSLLNPLSHHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAAR 129
Query: 308 LGALDFSKWVHVYA-EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ VH A + NV V AL++MY K G+I +A VF+ M ++ ++W
Sbjct: 130 AHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAA 189
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMP---DGITFIGILCACT-----------HMGLV 412
+++G A A LF +M GE P + +L A + H +V
Sbjct: 190 MVAGYAARKCSQEAFELFRQM--LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVV 247
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
++G+ F S ++ S+V GCM +A V E +++ W+ ++
Sbjct: 248 KDGMVGFVS--VENSLVTMYAKAGCM-----------DAAFHVFESSKERNSITWSAMIT 294
Query: 473 SCRVYKNVELAELALERLTELEPKN--PANFVMLS--NIYGDLGRWKDVARIKVAMRDTG 528
Y AE A+ +++ P F ++ N D+G + + M G
Sbjct: 295 G---YSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLG 351
Query: 529 FKKLPGCSSIEVNEVVMLGCL 549
F+ S V+ GC+
Sbjct: 352 FEVQVYVKSALVDMYAKCGCI 372
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/532 (36%), Positives = 286/532 (53%), Gaps = 23/532 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
IQ V+ G + YI +I A ++ ARK+FD + ++VSWN+M GY
Sbjct: 148 IQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGY----- 202
Query: 81 HRTVVVLFTQMKK--LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
V+V + K D MP I S + + + E C + + ++
Sbjct: 203 ---VLVGNVEEAKDVYDRMPE--RNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSW 257
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC---------GDIVSARCLF 189
+ALI Y + E A +F EM+ ++V ++ +S G +V +
Sbjct: 258 SALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHG-LVV 316
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
++ E V L N ++ Y ++ A+KLF + D ISWN+M+SGY G++E+ +
Sbjct: 317 KVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARA 376
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+ MP+++ SW+ +I GYA F E L F+ M EG P++ +V+V+SAC L
Sbjct: 377 LFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG-TKPDETILVSVISACTHLA 435
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
ALD KW+H Y NG + N+ +G LI+MY K G +E+A++VF ++ K + TWN +I
Sbjct: 436 ALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALIL 495
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLAM+G +L F EMK G P+ ITF+ +L AC HMGLV+EG +F SM ++ I
Sbjct: 496 GLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIG 555
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P I+HYGCMVDLL RAG L EA + ++ MP+ D W LLG+C+ Y + E E +
Sbjct: 556 PNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRK 615
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L EL P + V+LSNIY G W DV ++ MR G K PGCS IE +
Sbjct: 616 LVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAH 667
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 210/442 (47%), Gaps = 65/442 (14%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLK--QMTYARKMFDKITDQN 64
H ++ + K +QI +Q++ SG K + R++ +L + + ++F I + N
Sbjct: 31 THLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPN 90
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
N M GY Q + ++ M + + + +T+PI+ +SC A +G+ +
Sbjct: 91 GFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQD 150
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
VLK GF +++++ LI +Y+ + A KVF ++V W SM+ GY+ G++
Sbjct: 151 HVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEE 210
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
A+ +++ PER+VI N+++ + N+ EA KLF++M +KD++SW+ ++S Y N
Sbjct: 211 AKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMY 270
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
EE LF+EM + NG + ++ +++VLSA
Sbjct: 271 EEALILFKEM------NANG--------------------------IMVDEVVVLSVLSA 298
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA----------------------- 341
C+RL + K VH G + V + NALI MY+
Sbjct: 299 CSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISW 358
Query: 342 --------KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
KCG IE A +F+SM KD ++W+ +ISG A R L LF EM+ G
Sbjct: 359 NSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTK 418
Query: 394 PDGITFIGILCACTHMGLVEEG 415
PD + ++ ACTH+ +++G
Sbjct: 419 PDETILVSVISACTHLAALDQG 440
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 296/533 (55%), Gaps = 11/533 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G E + +IT + + AR +FDK+ +++ +SWNAM +GY +N
Sbjct: 228 EIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENG 287
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M K P+ T V+ +C + R G ++H VL+ F + +
Sbjct: 288 VCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHN 347
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
+LI +YS+ IE A VF + R++V WT+MI+GY +C A +++
Sbjct: 348 SLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMP 407
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLF 251
D I ++S + N+ L + +K ++S+ N+++ YA +++ +F
Sbjct: 408 DEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIF 467
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E+N+ SW +I G N FE L F+ M+ R+ PN T+V VLSACAR+GAL
Sbjct: 468 HSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR--RLKPNSVTLVCVLSACARIGAL 525
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H +A G + + NA++DMY +CG +E A F S+D ++ +WN +++G
Sbjct: 526 TCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGY 584
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A G+GA A LF M + P+ +TFI ILCAC+ G+V EGL YF SM YSI+P
Sbjct: 585 AERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPN 644
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HY C+VDLL R+G+L EA +F+++MP++ D +W LL SCR++ +VEL ELA E +
Sbjct: 645 LKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIF 704
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ + + +++LSN+Y D G+W VA ++ MR G PGCS +EV V
Sbjct: 705 QDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTV 757
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 225/446 (50%), Gaps = 15/446 (3%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+F ++ +N+ SWN + GYA+ + L+ +M + P+ +TFP VL++C +
Sbjct: 163 VFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPN 222
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L G E+H V++ GF +++ V ALI +Y + A VF +M R+ + W +MI+G
Sbjct: 223 LVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISG 282
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KD 227
Y G + LF + + D++ ++++ + + R++ + + +D
Sbjct: 283 YFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRD 342
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
N+++ Y++ G +EE + +F R++ SW +I GY N + + L+ +K M
Sbjct: 343 PSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEA 402
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG + P++ TI VLSAC+ L LD +H A+ G V N+LIDMYAKC I+
Sbjct: 403 EG-IMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCID 461
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A+++F+S K++++W +II GL ++ R AL F EM + P+ +T + +L AC
Sbjct: 462 KALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLK-PNSVTLVCVLSACA 520
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+G + G + A+ + ++D+ R GR+ A + + ++ + W
Sbjct: 521 RIGALTCG-KEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYA--WKQFFSVDHEVTSW 577
Query: 468 ANLL-GSCRVYKNVELAELALERLTE 492
LL G K EL +R+ E
Sbjct: 578 NILLTGYAERGKGAHATEL-FQRMVE 602
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 8/264 (3%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +LS + G++ + +F M +RN+FSWN L+GGYA GLF E LD + RML G V
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG-V 203
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P+ T VL C + L + +HV+ G++ +V V NALI MY KCG + A
Sbjct: 204 KPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARL 263
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ M +D I+WN +ISG +G L LF M PD +T ++ AC +G
Sbjct: 264 VFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGD 323
Query: 412 VEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
G + + ++ P I + ++ + + G + EA R D V W +
Sbjct: 324 DRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEAETVFSRTECR-DLVSWTAM 380
Query: 471 LGSCRVYKNVELAELALERLTELE 494
+ Y+N + + ALE +E
Sbjct: 381 ISG---YENCLMPQKALETYKMME 401
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 3/222 (1%)
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
+ E R+ D V ++ C A V+ Y + ++ +GNAL+ M+ + G
Sbjct: 97 MHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGN 156
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ +A VF M+ ++L +WN ++ G A G AL L+H M G PD TF +L
Sbjct: 157 LVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRT 216
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C M + G + Y ++ ++ + + G + A +MP D +
Sbjct: 217 CGGMPNLVRGRE-IHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP-NRDRI 274
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
W N + S V L L L + P +P M S I
Sbjct: 275 SW-NAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVI 315
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 301/549 (54%), Gaps = 15/549 (2%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+K+ T S+ H I+TQ + S +I+ LK + A +F +
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRTQSL------SHTSASIVISIYTNLKLLHEALLVFKTL 65
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
V++W ++ + + F +M+ P+ FP VLKSC + LR GE
Sbjct: 66 ESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+H +++ G +++ G AL+ +YS I++ KVF M ++VV + ++I GY G
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSG 185
Query: 181 DIVSA-RCLFELAP---ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWN 232
A R + E+ + D ++++ + + ++++ +++ + +K DV +
Sbjct: 186 MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGS 245
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+++ YA + +E+ +R+F + R+ SWN L+ GY NG + E L F++M++ +V
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVS-AKVR 304
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P +V+ ACA L L K +H Y G+ N+ + +AL+DMY+KCG I+ A +
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKI 364
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M+ D ++W II G A+HG G A+SLF EMK G P+ + F+ +L AC+H+GLV
Sbjct: 365 FDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 424
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+E YF SM Y + ++EHY + DLL RAG+L EA DF+ +M +E +W+ LL
Sbjct: 425 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLS 484
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
SC V+KN+ELAE E++ ++ +N +V++ N+Y GRWK++A++++ +R G +K
Sbjct: 485 SCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKK 544
Query: 533 PGCSSIEVN 541
P CS IE+
Sbjct: 545 PACSWIEMK 553
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 266/466 (57%), Gaps = 11/466 (2%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + A PN FTFP +KSC ++ G++LHC V K G FV T+LI +Y
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 151 IEAAYKVFGE--MDERNVVVWTSMINGYI---SCGDIVSARC-LFELAPERDVILWNTIV 204
I+ A K+F E + V + S+++GY D+V C + EL E + + +V
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 205 SGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N+ + K D N +L+ Y +G+++ ++LF+EMP + +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+WN +I GYA NGL VL+ +K M ++G P+ T+V VLS+CA LGAL K V
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKG-FCPDPLTLVGVLSSCAHLGALSVGKEVERK 239
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
E G+ N + NAL++MYA+CG ++ A D+F+ M K +++W II G MHG+G A
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVA 299
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
+ LF EM G PDG F+ +L AC+H GL +GL YF M Y + P EHY CMVD
Sbjct: 300 VGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVD 359
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAGRL EA + ++ M + AD +W LLG+C++++NVELAELA E++ ELEP N
Sbjct: 360 LLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGY 419
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+V+LSN+Y + G + + R+++ MR KK PGCS +E V L
Sbjct: 420 YVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHL 465
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 168/375 (44%), Gaps = 29/375 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN--VVSWNAMFNGYAQ 77
Q+ V +G ++ +I+ + + ARK+FD+ V +N++ +GYA
Sbjct: 31 QLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYAL 90
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N + VVVLF +M++L N T +++ C L G +H +K G + V
Sbjct: 91 NSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSV 150
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
G L+ +Y I+ K+F EM + ++ W +MINGY G A + EL E +
Sbjct: 151 GNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNG---LANNVLELYKEMES 207
Query: 198 ------------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+L + G + V +E RK+ + N +++ YA G+++
Sbjct: 208 KGFCPDPLTLVGVLSSCAHLGALSVGKEVE-RKMEGFGFSSNPFLNNALVNMYARCGNLK 266
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ + +F+ MP ++V SW +IGGY +G + F M+ G + P+ V+VLSAC
Sbjct: 267 KARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMI-RGGIKPDGTAFVSVLSAC 325
Query: 306 ARLG----ALD-FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
+ G LD F Y G + C ++D+ + G + A ++ SM +
Sbjct: 326 SHAGLTNKGLDYFGVMERKYGLRPGAEHYSC----MVDLLGRAGRLNEARELIESMQVRA 381
Query: 360 DLITWNTIISGLAMH 374
D W ++ +H
Sbjct: 382 DGALWGALLGACKIH 396
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 21/273 (7%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
PN T + +CA L K +H + G V +LI MY KC +I+NA +
Sbjct: 8 PNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKL 67
Query: 353 F--NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT--- 407
F N K + +N+++SG A++ R + LF EM+ G +G+T +G++ C
Sbjct: 68 FDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPG 127
Query: 408 --HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
+G+ G + MD S+ C++ + ++G + MP + +
Sbjct: 128 NLGLGMCVHGFCVKFGLDMDSSV------GNCLLTMYVKSGEIDCGRKLFDEMPRKG-LI 180
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPK----NPANFVMLSNIYGDLGRWKDVARIK 521
W ++ Y LA LE E+E K +P V + + LG ++
Sbjct: 181 TWNAMING---YAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVE 237
Query: 522 VAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELD 554
M GF P ++ VN G L + D
Sbjct: 238 RKMEGFGFSSNPFLNNALVNMYARCGNLKKARD 270
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 286/512 (55%), Gaps = 40/512 (7%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
K+ A ++FDK+ D++V+SWN+M +GY N + ++ QM L + T VL
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
C L G+ +H L +K+ F I L+++YS ++ A +VF +M ERNVV
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 168 VWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIV-----SGYI----DVRNMI 214
WTSMI GY G A L + + DV+ +I+ SG + DV + I
Sbjct: 319 SWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+A + + ++ N ++ YA G +E +F M +++ SWN +I
Sbjct: 379 KANNM-----ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------- 425
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
G + P+ T+ VL ACA L AL+ K +H Y NGY + V N
Sbjct: 426 --------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
AL+D+Y KCG++ A +F+ + +KDL++W +I+G MHG G A++ F+EM++AG P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ++FI IL AC+H GL+E+G +F M D++I P++EHY CMVDLL+R G L++A +F
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF 591
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
++ +PI DA IW LL CR Y ++ELAE ER+ ELEP+N +V+L+NIY + +W
Sbjct: 592 METLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKW 651
Query: 515 KDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
++V R++ + G +K PGCS IE+ V L
Sbjct: 652 EEVKRLREKIGKQGLRKNPGCSWIEIKGKVNL 683
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 214/450 (47%), Gaps = 64/450 (14%)
Query: 32 KSDYITPRIITACAQLK-QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
K+ +P I ++C ++ T R + ++TD N + G +N ++ Q
Sbjct: 38 KTKIFSP-IFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQLGDLENAME---LICMCQ 93
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+L+ T+ VL+ C + + +G+++H ++ N + +G L+ Y+T
Sbjct: 94 KSELETK----TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGD 149
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ +VF M+++NV +W M++ Y GD + CLF++ E+ I+
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEG 198
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ A +LFD++ +DVISWN+M+SGY +NG + ER
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNG-----------LTERG------------ 235
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
L +K+M+ G + + ATI++VL CA G L K VH A + ++ +
Sbjct: 236 --------LGIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI 286
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N L+DMY+KCG ++ A+ VF M +++++W ++I+G GR GA+ L +M+
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKE 346
Query: 391 GEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGC--MVDLLARA 445
G D + IL AC G ++ G Y ++ M+ ++ + C ++D+ A+
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL------FVCNALMDMYAKC 400
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
G + EA + V + D + W ++G +
Sbjct: 401 GSM-EAANSVFSTMVVKDIISWNTMIGELK 429
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 169/388 (43%), Gaps = 63/388 (16%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A+S L K +H + + S E+ + ++ ++ + A ++F+K+ ++NVV
Sbjct: 262 ANSGTLSLGKAVHSL---AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW +M GY ++ + L QM+K + +L +C + +L G+++H +
Sbjct: 319 SWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI------NGYISCG 180
N +N+FV AL+++Y+ ++EAA VF M ++++ W +MI + ++C
Sbjct: 379 KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMAC- 437
Query: 181 DIVSARCLFELAPER---------------DVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
V C A ER D + N +V Y+ + AR LFD +P
Sbjct: 438 --VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
KD++SW M++GY + GY N E + F M
Sbjct: 496 KDLVSWTVMIAGYG--------------------------MHGYGN-----EAIATFNEM 524
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKC 343
G + P++ + +++L AC+ G L+ W Y N + + + ++D+ ++
Sbjct: 525 RDAG-IEPDEVSFISILYACSHSGLLE-QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582
Query: 344 GIIENAVDVFNSMD-TKDLITWNTIISG 370
G + A + ++ D W ++ G
Sbjct: 583 GNLSKAYEFMETLPIAPDATIWGALLCG 610
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 293/532 (55%), Gaps = 39/532 (7%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+A ++FD + +++VVSWN M + +Q+ R + + M+ + T+ L +C
Sbjct: 242 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 301
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
++++LR G++LH V++N + +V +AL+ELY+ + A VF + +RN V WT
Sbjct: 302 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 361
Query: 172 MINGYISCG-----------------------------------DIVSARCLFELAPE-- 194
+I+G++ G D+ R L L +
Sbjct: 362 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 421
Query: 195 --RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ V++ N+++S Y N+ A +F M +KD++SW +M++ Y+ G+V + + F+
Sbjct: 422 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 481
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M E+NV +WN ++G Y +G + L +K ML+E V P+ T VT+ CA LGA
Sbjct: 482 GMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANK 541
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ G + V NA+I MY+KCG I A VF+ ++ KD+++WN +I+G +
Sbjct: 542 LGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS 601
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G A+ +F ++ G PD I+++ +L C+H GLV+EG YF M ++I P +
Sbjct: 602 QHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGL 661
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH+ CMVDLL RAG L EA D + MP++ A +W LL +C+++ N ELAELA + + E
Sbjct: 662 EHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFE 721
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ + ++++++ IY D G+ D A+I+ MRD G KK PG S +EV+ V
Sbjct: 722 LDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKV 773
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 195/443 (44%), Gaps = 51/443 (11%)
Query: 34 DYITPRIIT------ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVL 87
D P +IT A+L +++ A ++F ++ ++V SWN + +GY Q+ + +
Sbjct: 85 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 144
Query: 88 FTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
F M + D+ PN FT +KSC + +L +V K + + V AL++++
Sbjct: 145 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 204
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
A++ A ++F + E + SM+ GY+ + A LF+ PERDV+ WN +VS
Sbjct: 205 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 264
Query: 207 YIDVRNMIEARKLFDQMPKKDV-------------------ISWNTMLSG---------- 237
+ EA + M K V + W L
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 324
Query: 238 ----------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
YA +G +E K +F + +RN +W LI G+ G F E ++ F +M
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
E A + T++S C L + +H +G V V N+LI MYAKC ++
Sbjct: 385 ELMTLDQFA-LATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQ 443
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
+A +F M+ KD+++W ++I+ + G A A F M + IT+ +L A
Sbjct: 444 SAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE----KNVITWNAMLGAYI 499
Query: 408 HMGLVEEGLSYFQSMAMDYSIVP 430
G E+GL ++ M + + P
Sbjct: 500 QHGAEEDGLRMYKVMLSEEYVRP 522
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 185/410 (45%), Gaps = 49/410 (11%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L + + Q+ QV+ + Y+ ++ A+ A+ +F+ + D+N V+W
Sbjct: 302 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 361
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ +G+ Q V LF QM+ + F ++ C L G +LH L LK+G
Sbjct: 362 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 421
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ V +LI +Y+ +++A +F M+E+++V WTSMI Y G++ AR F+
Sbjct: 422 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 481
Query: 191 LAPERDVILWNTIVSGYI------DVRNMIE--------------------------ARK 218
E++VI WN ++ YI D M + A K
Sbjct: 482 GMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANK 541
Query: 219 LFDQMPKK--------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
L DQ+ + D N +++ Y+ G + E +++F+ + +++ SWN +I GY+
Sbjct: 542 LGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYS 601
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G+ + ++ F +L G P+ + V VLS C+ G + K+ Y + N+
Sbjct: 602 QHGMGKQAIEIFDDILKRG-AKPDYISYVAVLSGCSHSGLVQEGKF---YFDMMKRAHNI 657
Query: 331 CVG----NALIDMYAKCGIIENAVDVFNSMDTKDLI-TWNTIISGLAMHG 375
G + ++D+ + G + A D+ + M K W ++S +HG
Sbjct: 658 SPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG 707
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLF-DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V L NT++ Y+ + +AR+L + +VI+ N ML+GYA G + + LF MP
Sbjct: 59 VFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMP 118
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
R+V SWN L+ GY + + L+ F M G +PN T+ + +C LG +
Sbjct: 119 ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLAL 178
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE---------------------------- 347
+ + Q + V AL+DM+ +CG ++
Sbjct: 179 QLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 238
Query: 348 ---NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
+A+++F+SM +D+++WN ++S L+ GR AL + +M++ G D T+ L
Sbjct: 239 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 298
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEA 451
AC + + G Q A +P I+ Y +V+L A++G EA
Sbjct: 299 ACARLSSLRWGK---QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEA 344
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 183/464 (39%), Gaps = 77/464 (16%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-STGKAIEAAYKVFGE 160
F L+SC AL LH ++ G + +F+ L+ Y S G +A + +
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+ NV+ M+NGY G + A LF P RDV WNT++SGY R + + + F
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 221 DQMPKK-----------------DVISWNT-----------------------MLSGYAN 240
M + + W++ ++ +
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205
Query: 241 NGDVEECKRLFEEMPERNVF-------------------------------SWNGLIGGY 269
G V+ RLF + E +F SWN ++
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
+ +G E LD M ++G V + T + L+ACARL +L + K +H N +
Sbjct: 266 SQSGRVREALDMVVDMQSKG-VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 324
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V +AL+++YAK G + A VFNS+ ++ + W +ISG +G ++ LF++M+
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384
Query: 390 AGEMPDGITFIGILCA-CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
D ++ C+ M L S+ + + + ++ + A+ L
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLG--RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 442
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
++ + + R E D V W +++ + NV A + ++E
Sbjct: 443 -QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 485
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 191/540 (35%), Positives = 295/540 (54%), Gaps = 18/540 (3%)
Query: 20 QIQTQVVTSGLEKSDY-ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + +GL + + +I A+ + +AR +F + D++ VSWN+M G QN
Sbjct: 123 QVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQN 182
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ V + M+K MP+ F L SC + + G++ H +K G ++ V
Sbjct: 183 KCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVS 242
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
L+ LY+ + KVF M ER+ V W ++I G VS E+ E
Sbjct: 243 NTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSE--AIEVFLEMMRA 300
Query: 199 LWNTIVSGYIDVRNMIEA---RKLFDQMP--------KKDVISWNTMLSGYANNGDVEEC 247
W+ +I++ + + KL Q+ K D N +L+ Y +G++E C
Sbjct: 301 GWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC 360
Query: 248 KRLFEEMPER-NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ +F M ER + SWN +I GY +N L + +D M+ G+ + T TVLSACA
Sbjct: 361 EEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRL-DCFTFATVLSACA 419
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ L+ VH A + +V +G+AL+DMY+KCG I+ A FN M ++L +WN+
Sbjct: 420 TVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNS 479
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISG A HG G AL LF MK +G++PD ITF+G+L AC+H+GLV+EG YF+SM Y
Sbjct: 480 MISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVY 539
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC--RVYKNVELAE 484
+VP++EHY CMVDLL RAG L + +F+ +MPI+ + +IW +LG+C + EL
Sbjct: 540 GLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGR 599
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A E L ++P+N N+V+LSN+Y G+W+D+AR + AMR+ KK GCS + + + V
Sbjct: 600 RAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGV 659
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 209/482 (43%), Gaps = 78/482 (16%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
V+ G + ++ +I ++ ARK+FD++ D+N V+W + +GY QN
Sbjct: 25 NVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPED 84
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVK-INALREGEELHCLVLKNGFR-ANIFVGTAL 141
+ +M +PN F F +++C + + R+G ++H ++ G A + VG L
Sbjct: 85 ACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGL 144
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY------------------------- 176
I +Y+ I+ A VFG M +++ V W SMI G
Sbjct: 145 INMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 204
Query: 177 ----ISCGDIVSARCLF----------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+ S C+ +L + DV + NT+++ Y + + E +K+F
Sbjct: 205 FALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSW 264
Query: 223 MPKKDVISWNTMLSGYANNG-DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
M ++D +SWNT++ A++G V E +F EM + G++
Sbjct: 265 MLERDQVSWNTVIGALADSGASVSEAIEVFLEM----------MRAGWS----------- 303
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH-VYAEYNGYQGNVCVGNALIDMY 340
PN T + +L+ + L S +H + +YN N + NAL+ Y
Sbjct: 304 -----------PNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNA-IENALLACY 351
Query: 341 AKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
K G +EN ++F+ M + +D ++WN++ISG + A+ L M G+ D TF
Sbjct: 352 GKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTF 411
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+L AC + +E G+ + A+ + + +VD+ ++ GR+ A F MP
Sbjct: 412 ATVLSACATVATLECGME-VHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMP 470
Query: 460 IE 461
+
Sbjct: 471 VR 472
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 39/374 (10%)
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---- 177
H VLK+GF +++F+ LI +Y +A K+F EM +RN V W +I+GY
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 178 ---SCGDIVSARCLFE-LAPER-----------DVILWNTI---VSGYIDVRNMIEARKL 219
+CG V +FE P R + +LW V GY + +A+
Sbjct: 82 PEDACG--VLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK-- 137
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
V N +++ YA GD++ + +F M +++ SWN +I G N F + +
Sbjct: 138 --------VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAV 189
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
++ M G + P++ +++ LS+CA LG + + H G +V V N L+ +
Sbjct: 190 KSYNSMRKTG-LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLAL 248
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG-ALSLFHEMKNAGEMPDGIT 398
YA+ + VF+ M +D ++WNT+I LA G A+ +F EM AG P+ +T
Sbjct: 249 YAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVT 308
Query: 399 FIGILCACTHMGLVEEGLSY-FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
FI +L + L LS+ ++ + Y++ ++ ++G + + R
Sbjct: 309 FINLLATVS--SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSR 366
Query: 458 MPIEADAVIWANLL 471
M D V W +++
Sbjct: 367 MSERRDEVSWNSMI 380
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D+ NT+++ Y GD ++LF+EMP+RN +W LI GY NG+ + K M+
Sbjct: 34 DLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMI 93
Query: 287 TEGRVFPNDATIVTVLSACA------RLGALDFSKWVHVYAEYNGYQ-GNVCVGNALIDM 339
EG PN + + AC R G + VH YA G V VGN LI+M
Sbjct: 94 FEG-FLPNRFAFGSAIRACQESMLWRRKG-----RQVHGYAIRTGLNDAKVAVGNGLINM 147
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
YAKCG I++A VF M KD ++WN++I+GL + A+ ++ M+ G MP
Sbjct: 148 YAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFAL 207
Query: 400 IGILCACTHMGLV-----EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
I L +C +G + G + MD S+ ++ L A RLAE
Sbjct: 208 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNT------LLALYAETSRLAECQKV 261
Query: 455 VKRMPIEADAVIWANLLGS 473
M +E D V W ++G+
Sbjct: 262 FSWM-LERDQVSWNTVIGA 279
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 39/304 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWN 69
L T+K HQI ++ ++ + I ++ + +M ++F ++++ ++ VSWN
Sbjct: 318 SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 377
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+M +GY NE + L M + +CFTF VL +C + L G E+H ++
Sbjct: 378 SMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRA 437
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
+++ +G+AL+++YS I+ A + F M RN+ W SMI+GY G +A LF
Sbjct: 438 CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLF 497
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
KL Q+P D I++ +LS ++ G V+E
Sbjct: 498 -------------------------TRMKLSGQLP--DHITFVGVLSACSHIGLVDEGFE 530
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEV------LDAFKRMLTEGRVFPNDATIVTVLS 303
F+ M E V+ GL+ + ++ LD + + + + PN TVL
Sbjct: 531 YFKSMTE--VY---GLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLG 585
Query: 304 ACAR 307
AC R
Sbjct: 586 ACCR 589
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 274/521 (52%), Gaps = 30/521 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
++ A A+ M AR++FD++ +N SWN M G+ F VV + DAMP
Sbjct: 102 LLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGF----FAAGQVV--KALDVFDAMPA 155
Query: 99 -NCFTFPIVLKSCVKINALREGEEL-----------------HCLVLKNGFRANIFVGTA 140
+ + ++ K L E EEL + L++ G
Sbjct: 156 KDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKR 215
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L ++ G+ K G ERNVV W SM+ YI GD+ SAR LF P++D++ W
Sbjct: 216 LFDMIPKGQYQHNMLKRKGF--ERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSW 273
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
NT++SGY +M E+ KLF +MP D +SWN ++ G+ G+ E + F+ MPER
Sbjct: 274 NTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTI 333
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN +I GY NG + + F +ML G + P+ T +VL+ACA + L +H
Sbjct: 334 SWNTMISGYEKNGNYISSVKLFSKMLEVGEI-PDRHTFSSVLAACASIPMLGLGAQIHQL 392
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAG 379
E + + + NALI MY++CG + +A +F M TK DL++WN +I HGR
Sbjct: 393 VE-KSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATK 451
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL LF EM+ A MP ITF+ +L AC + GLV EG F +M +Y IV +IEHY +V
Sbjct: 452 ALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALV 511
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
+L+ R G+L +A++ + MP+ D +W LG+C KN LA++A + L+ + P + A
Sbjct: 512 NLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTINPDSSA 571
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+V++ N++ G+W A ++ M G K PG S I++
Sbjct: 572 PYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDL 612
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 180/414 (43%), Gaps = 80/414 (19%)
Query: 156 KVFGEMDERNVVVWTSMINGYISC---GDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
+ F M R+ V W +++ Y + + +AR LF+ P+RDV+ WNT++ Y
Sbjct: 52 EFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGL 111
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
M EAR+LFD+MP+++ SWNTM++G+ G V + +F+ MP ++ S + ++ G+ N
Sbjct: 112 MDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKN 171
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK----------WVHVYAE 322
G+ E + + L+ + T++ A + G +K + H +
Sbjct: 172 GMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLK 231
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL----------- 371
G++ NV N+++ Y K G + +A +FN M KDL++WNT+ISG
Sbjct: 232 RKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEK 291
Query: 372 -------------------------AMHGRG--------------------------AGA 380
A H RG +
Sbjct: 292 LFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISS 351
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
+ LF +M GE+PD TF +L AC + ++ G Q ++ S VP ++
Sbjct: 352 VKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQ--LVEKSFVPDTAISNALIT 409
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
+ +R G L +A K+M + D V W L+G Y++ A AL+ E+
Sbjct: 410 MYSRCGALNDAEAIFKQMHTKKDLVSWNALIG---CYEHHGRATKALQLFKEMR 460
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR+LFD +P + V++WN++L+G A D + F+ MP R+ SWN L+ Y+ +
Sbjct: 19 ARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAAYSASP-H 77
Query: 276 FEVLDAFKRMLTEGRVFPNDATIV--TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
+ L A +R+ E P + T+L A AR G +D ++ ++ E Q N
Sbjct: 78 PDHLAAARRLFDE---MPQRDVVTWNTLLGAYARRGLMDEAR--RLFDEMP--QRNAASW 130
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
N ++ + G + A+DVF++M KD + +T++SG +G
Sbjct: 131 NTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNG 172
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 10/228 (4%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N L+ G +RLF+ +P R+V +WN L+ G A + F M V
Sbjct: 4 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 63
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N T++ SA L ++ ++ E Q +V N L+ YA+ G+++ A
Sbjct: 64 SWN--TLLAAYSASPHPDHLAAAR--RLFDEMP--QRDVVTWNTLLGAYARRGLMDEARR 117
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M ++ +WNT+++G G+ AL +F M D + ++ T G+
Sbjct: 118 LFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMP----AKDSASLSTMVSGFTKNGM 173
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ E + ++ Y ++ +AGR ++A +P
Sbjct: 174 LHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIP 221
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/553 (34%), Positives = 303/553 (54%), Gaps = 29/553 (5%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITAC--AQLKQMTYARKMFDKITDQNVVSW 68
+ ++ + L ++ +VT+ KS ++I C ++ + YA + +I + +V W
Sbjct: 13 KCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNPSVYIW 72
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M G+ + R ++L+ QM + P+ FTFP VLK+C I G+ +H ++K
Sbjct: 73 NSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIHSCIVK 132
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+GF A+ + T L+ +Y + +++ KVF + + NVV WT +I GY+ A +
Sbjct: 133 SGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPYEALKV 192
Query: 189 FELAPERDVILWN------TIVSGYI---DVRNMIEARKLFDQMPK-----------KDV 228
FE D+ WN T+V+ I R++ R + ++ K ++
Sbjct: 193 FE-----DMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNI 247
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
I +L YA G ++ + LF +MP+RN+ SWN +I Y E LD F M T
Sbjct: 248 ILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTS 307
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G V+P+ AT ++VLS CA AL + VH Y G ++ + AL+DMYAK G + N
Sbjct: 308 G-VYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGN 366
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK-NAGEMPDGITFIGILCACT 407
A +F+S+ KD++ W ++I+GLAMHG G ALS+F M+ ++ +PD IT+IG+L AC+
Sbjct: 367 AQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACS 426
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H+GLVEE +F+ M Y +VP EHYGCMVDLL+RAG EA ++ M ++ + IW
Sbjct: 427 HVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIW 486
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
LL C++++NV +A RL ELEP ++LSNIY GRW++V + M+
Sbjct: 487 GALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTRKVMKHK 546
Query: 528 GFKKLPGCSSIEV 540
K G SS+E+
Sbjct: 547 RITKTIGHSSVEM 559
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/566 (35%), Positives = 299/566 (52%), Gaps = 46/566 (8%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
+ A +++ AR++FD + D++VVSW AM YA+ + VLF + DA N
Sbjct: 48 VAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLF---DRPDARRNV 104
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST------------- 147
T+ +L + + E E L + N+ ++E Y+
Sbjct: 105 VTWTALLSGYARARRVDEAEAL----FEGMAERNVVSWNTMLEAYTAVGRVEDASALFNR 160
Query: 148 ------------------GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
++E A K+F M R+V+ WT+MI+G G + A LF
Sbjct: 161 MPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLF 220
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PER+V+ WN ++SGY + EA LF +MP +DV SWN M++G+ N D++ ++
Sbjct: 221 DAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQ 280
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+EMP+RNV +W ++ GY L F ML +G + PN T + L AC+ L
Sbjct: 281 LFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQG-IQPNQVTFLGSLDACSNLA 339
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + VH Q + V + L+++YAKCG I A +VF+ KDLI+WN II+
Sbjct: 340 ALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIA 399
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
A HG G A+ L+ M+ G P+ T++G+L AC+H GLV+EGL F+SM D SIV
Sbjct: 400 AYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIV 459
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE-ADAVIWANLLGSCRVYKNVELAELALE 488
+ EHY C+VDL +RAGRL +A + I+ + +W+ LLG C + N + +LA +
Sbjct: 460 VRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAK 519
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGC 548
L E EP N + +L NIY G+WK+ A I+ M G KK PGCS IEV V +
Sbjct: 520 HLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHV-F 578
Query: 549 LSRELDRKSIVRAEANMIKLLPQNNH 574
+SR+ KS +E+++I L Q+ H
Sbjct: 579 VSRD---KS--HSESDLINDLLQDIH 599
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 23/278 (8%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ A G V + +RLF+ MP+R+V SW ++ YA G+ E F R + R
Sbjct: 45 NWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR--PDAR- 101
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAV 350
N T +LS AR +D ++ A + G + NV N +++ Y G +E+A
Sbjct: 102 -RNVVTWTALLSGYARARRVDEAE-----ALFEGMAERNVVSWNTMLEAYTAVGRVEDAS 155
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
+FN M +D +WN ++ GL G A +F M + D +++ ++ G
Sbjct: 156 ALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMP----VRDVMSWTTMISGLARNG 211
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
V++ F +M + ++V + M+ AR R+ EA+D +MPI D W +
Sbjct: 212 SVDDAWVLFDAMP-ERNVVS----WNAMISGYARNHRIEEALDLFTKMPIR-DVASWNIM 265
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
+ K+++ A + E+ +N + + N Y
Sbjct: 266 ITGFIQNKDLKSAR---QLFDEMPKRNVITWTTMMNGY 300
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + + + ++ ++ A+ ++ AR +FD +++++SWN + YA +
Sbjct: 345 QQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHH 404
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFV 137
F + L+ M++ PN T+ +L +C + EG ++ +V N
Sbjct: 405 GFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEH 464
Query: 138 GTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMINGYISCGD----IVSARCLFEL 191
T L++L S +E A ++ ++ + VW++++ G S G+ ++A+ L E
Sbjct: 465 YTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEA 524
Query: 192 APE 194
P+
Sbjct: 525 EPD 527
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 273/485 (56%), Gaps = 9/485 (1%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+ A F KI NV+SW + NGY + LF +M + N + ++L
Sbjct: 220 LNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPE----RNVVAWNVMLDG 275
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
V ++ + E C + N T +I + ++ A + +M V
Sbjct: 276 YVHLSPIEEA----CKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAK 331
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
T++++GY+ AR +F+ D + WNT++SGY+ + EA LF +MP KD++
Sbjct: 332 TALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMV 391
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
SWNTM++GYA +G + + +F M RN SWN +I G+ N F + L F ++ G
Sbjct: 392 SWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFM-LMRRG 450
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ +T + L ACA L L + +H +G+ + GNALI YAKCG I A
Sbjct: 451 TNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEA 510
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+F+ M KD+++WN +I G A +G+G A+++F EM+ G PD +TF+GIL AC+H
Sbjct: 511 KQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHA 570
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
GL++EGL +F SM +Y + P EHY CMVDLL RAG+L EA + V+ M I+ +A +W
Sbjct: 571 GLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGA 630
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LLG+C ++KN ELA+LA ERL+ELEP+ +N+V+LSNI + G+W + + + ++++ G
Sbjct: 631 LLGACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGV 690
Query: 530 KKLPG 534
K PG
Sbjct: 691 NKPPG 695
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 179/409 (43%), Gaps = 79/409 (19%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-- 98
+T A+ Q+ AR++FD + +N V++NAM + A++ LF D MP
Sbjct: 25 LTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALF------DGMPGR 78
Query: 99 NCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVG------------------- 138
N ++ ++ + + + L + +++ F + V
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMP 138
Query: 139 --------TALIELYSTGKAIEAAYKVFGEMDERNVVVWTS------------------- 171
A+I Y+ + A K+ EM ++V W S
Sbjct: 139 GDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFD 198
Query: 172 -----------MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M+ G++ GD+ +A F +VI W T+++GY + +AR LF
Sbjct: 199 EMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLF 258
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D+MP+++V++WN ML GY + +EE +LF+EMP +N SW +I G A G E D
Sbjct: 259 DRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKD 318
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ--GNVCVGNALID 338
+M F A ++ + D ++ + ++G + VC N +I
Sbjct: 319 LLDKM-----SFNCVAAKTALMHGYLQRNMADDARRI-----FDGMEVHDTVCW-NTMIS 367
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
Y +CGI+E A+ +F M KD+++WNT+I+G A G+ A+ +F M
Sbjct: 368 GYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRM 416
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 25/329 (7%)
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
FR+N L L +G+ + AA ++F M RN V + +M++ G I AR LF+
Sbjct: 19 FRSN----KELTRLARSGQ-LAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFD 73
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P R+ + WN +++ D + +AR LFD+MP +D SW M+S YA GD+E + +
Sbjct: 74 GMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDV 133
Query: 251 FEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+ MP ++ +N +I GYA NG F + + + M P+ + + L+ + G
Sbjct: 134 LDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPA-----PDLVSWNSALAGLTQSG 188
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ V ++ ++ N ++ + + G + A F +++ ++I+W T+++
Sbjct: 189 EM-----VRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLN 243
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G GR A A LF M + + G + H+ +EE F M + SI
Sbjct: 244 GYCRAGRIADARDLFDRMPERNVVAWNVMLDGYV----HLSPIEEACKLFDEMPIKNSI- 298
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
+ ++ LARAG+L EA D + +M
Sbjct: 299 ----SWTTIISGLARAGKLQEAKDLLDKM 323
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I AQ QM A +F ++ +N VSWN++ +G+ QN+ + F M++ +
Sbjct: 396 MIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRAD 455
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L++C + L G +LH L++++G + F G ALI Y+ I A ++F
Sbjct: 456 WSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFD 515
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE 190
EM +++V W ++I+GY S G A +F
Sbjct: 516 EMVYKDIVSWNALIDGYASNGQGTEAIAVFR 546
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + LH + +V SG + +I+ A+ ++ A+++FD++ +++VSWNA+
Sbjct: 472 LHVGRQLHNL---LVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNAL 528
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GYA N + +F +M+ P+ TF +L +C + EG + K
Sbjct: 529 IDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYL 588
Query: 132 RANIFVGTA-LIELYS-TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
+ A +++L GK EA V G + N VW +++ +C + L
Sbjct: 589 LKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLG---AC-HMHKNHELA 644
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+LA ER L S Y+ + N+ +D+ K
Sbjct: 645 QLAAERLSELEPRKASNYVLLSNISAEAGKWDESEK 680
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 268/489 (54%), Gaps = 41/489 (8%)
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
A P+ TFP +LK+C ++ G + VL GF A++FV A + + ++ A
Sbjct: 116 ARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEAR 175
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-------ELAPE-------------- 194
K+F R++V W ++I GY+ G A +F + P+
Sbjct: 176 KLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQL 235
Query: 195 RD-------------------VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML 235
RD V L N ++ YI ++ A+ +F+ + KK ++SW TM+
Sbjct: 236 RDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMI 295
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
GYA G +++ +++F+EMPER+VF WN L+ GY E L F M E V P+D
Sbjct: 296 VGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDM-QEAMVEPDD 354
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T+V +LSAC++LGAL+ WVH Y + +V +G L+DMY+KCG IE A+ VF
Sbjct: 355 ITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKE 414
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
+ K+ +TW +ISGLA HG A+ F M G PD ITFIG+L AC H GLV+EG
Sbjct: 415 IPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEG 474
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
+F M Y + +++HY CMVDLL RAG L EA V MP+E DAV+W L +CR
Sbjct: 475 QEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACR 534
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++ N+ L E A +L EL+P + +V+L+N+Y + K +++V MR G +K+PGC
Sbjct: 535 MHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGC 594
Query: 536 SSIEVNEVV 544
S IE+N VV
Sbjct: 595 SCIELNGVV 603
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 188/411 (45%), Gaps = 51/411 (12%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L+ + + + V++ G ++ + A M ARK+FD +++VSWN
Sbjct: 132 RLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNT 191
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ GY + R + +F +M A+ P+ T V+ ++ L G LH V +
Sbjct: 192 LIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESH 251
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G R + + ++++Y +E A VF +D++ +V WT+MI GY G + AR +F
Sbjct: 252 GVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVF 311
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLF----DQMPKKDVISWNTMLSG-------- 237
+ PERDV WN +++GY+ + EA +LF + M + D I+ +LS
Sbjct: 312 DEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALE 371
Query: 238 ---------------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
Y+ G++E+ R+F+E+PE+N +W +I G A
Sbjct: 372 MGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLA 431
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNG 325
N+G + F+RM+ G + P++ T + VLSAC G + FS V Y
Sbjct: 432 NHGHADVAIKYFQRMIELG-LQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERK 490
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C ++D+ + G ++ A + N+M + D + W + MHG
Sbjct: 491 MKHYSC----MVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHG 537
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 288/528 (54%), Gaps = 41/528 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +FD + + + ++ H ++ F+ M + A P+V KSC
Sbjct: 72 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 131
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ +G ++HC L G ++FV TAL++ Y+ +E+A VF EM ++ + +
Sbjct: 132 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCL 191
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDV 228
I GY GD+ AR LF+ R WN++++ Y EA LFD+M + +
Sbjct: 192 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNA 251
Query: 229 ISWNTMLSGYANNGD----------------------------------VEECKRLFEEM 254
I+ ++ S A +GD +++ +R F+ M
Sbjct: 252 ITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRM 311
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRM-LTEGRVFPNDATIVTVLSACARLGALDF 313
+R+V +W+ +I GYA NG E L+ F+RM T+ R PN+ T+V V+SACA+LG+ +
Sbjct: 312 SQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCR--PNEVTLVGVISACAQLGSDEL 369
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ + YAE +G+ALIDMY +CG + A VF+ M+ K +ITWN++I GLAM
Sbjct: 370 VEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAM 429
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
+G A+SL+ +M G P+ ITF+ +L ACTH GLV++G+++F+ M ++ + PQ+E
Sbjct: 430 NGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVE 489
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H C+VDLL ++G L EA F+ M +E +AVIW LL SCR + +VELA+LA +L +
Sbjct: 490 HCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAM 549
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EP N + +V+LSNIY D G W D I+ MR +KL S I+++
Sbjct: 550 EPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLD 597
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 20/350 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ + AR++FD + + SWN+M YA R + LF +M A PN
Sbjct: 191 LITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPN 250
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V C K L G+ + L+ ++ + N+ V TAL+E+Y +AI+ A + F
Sbjct: 251 AITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFD 309
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M +R+VV W++MI GY G + + LFE D + G I + + +L
Sbjct: 310 RMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDEL 369
Query: 220 FDQM------PKKDVISW--NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+Q+ + + S+ + ++ Y G V + +F M ++ V +WN +I G A
Sbjct: 370 VEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAM 429
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGY 326
NG + + +++M G V PN+ T V +L+AC G +D F + +
Sbjct: 430 NGFAEDAISLYEKMAENG-VQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQV 488
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C+ +D+ K G + A M+ + + + W T++S H
Sbjct: 489 EHCACI----VDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHA 534
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + + QI L + Y+ +I + + AR +F ++ + V++WN+
Sbjct: 363 QLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNS 422
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EELHCLV 126
M G A N F + L+ +M + PN TF +L +C + +G EE+
Sbjct: 423 MIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMK--- 479
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI--- 182
++ + +++L + AYK +M+ E N V+WT++++ + D+
Sbjct: 480 REHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELA 539
Query: 183 -VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
+++R L + P+ I + + + Y D +AR++ D M K+V
Sbjct: 540 KLASRKLLAMEPDNSSI-YVLLSNIYADAGLWGDAREIRDLMRSKNV 585
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 283/532 (53%), Gaps = 36/532 (6%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAM 97
R I A ++ AR++FD+ D++VVSW AM YA Q + H +L + DA
Sbjct: 44 RRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLH----RPDAR 99
Query: 98 PNCFTFPIVLKSCVKINALREGE------------------ELHCLVLKNGFRANIFVGT 139
N T+ +L + + E E + + G +F G
Sbjct: 100 RNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGM 159
Query: 140 A----------LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
L L +G ++ A ++F M ERNV+ WT+MI+G G AR LF
Sbjct: 160 PVRDAGSWNILLAALVRSG-TMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALF 218
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PER+V+ WN ++SGY + EA LF MP++DV SWN M++G+ N D+++ +
Sbjct: 219 DGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQE 278
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+EMP+RNV SW ++ G L F ML +G + PN T + + A + L
Sbjct: 279 LFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDG-IRPNQVTFLGAVDAGSNLA 337
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L + VH +Q + + ++L+ +YAKCG I A VF+ KD+I+WN +I+
Sbjct: 338 GLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIA 397
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
A HG G A++L+ +M+ P+ +T++G+L AC+H GLV+EGL F+ MA D SI
Sbjct: 398 AYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIA 457
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE-ADAVIWANLLGSCRVYKNVELAELALE 488
+ EHY C++DL +RAGRL +A + + ++ + +W+ LLG C + N + +LA
Sbjct: 458 VRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAAR 517
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L E EP N + +LSNIY G+WK+ A+I+ M D G KK PGCS IE+
Sbjct: 518 NLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEL 569
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ A G V + +RLF+ P+R+V SW ++ YA G E +L
Sbjct: 43 NRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEA----SALLHRPDA 98
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N T +LS AR +D ++ + + NV N +++ YA G + A
Sbjct: 99 RRNVVTWTALLSGYARARRVDEARALFDRMP----ERNVVSWNTMLEAYASAGRMGAACA 154
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M +D +WN +++ L G A LF M M ++ ++ G
Sbjct: 155 LFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNVM----SWTTMISGLARSGS 210
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+E + F M + ++V + M+ AR R+ EA+D MP E D W ++
Sbjct: 211 ADEARALFDGMP-ERNVVS----WNAMISGYARNLRIDEALDLFMNMP-ERDVASWNIMI 264
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
K+++ A+ E E+ +N ++ + N
Sbjct: 265 TGFIQNKDLKKAQ---ELFDEMPKRNVVSWTTMMN 296
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + + + ++I ++ A+ ++ ARK+FD +++V+SWN M YA +
Sbjct: 343 QQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHH 402
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN---GFRANI 135
+ L+ +M++ PN T+ +L +C + EG + + K+ R
Sbjct: 403 GAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEH 462
Query: 136 FVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMI-----NGYISCGDIVSARCL 188
+ + LI+L S ++ A ++ ++ + VW++++ +G S GD+ +AR L
Sbjct: 463 Y--SCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDL-AARNL 519
Query: 189 FELAPE 194
E P+
Sbjct: 520 LEAEPD 525
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 274/466 (58%), Gaps = 22/466 (4%)
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
+FTQM+ +PN FT+P +LK+C + A GE++H VLK GF+ N++V + LI++Y+
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNT 202
++ A K+F + E +VV WT+MI GY A LF+ ++ D I + +
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFAS 544
Query: 203 IVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
+S ++ + + R++ Q D+ N ++S YA G V E F+++ ++
Sbjct: 545 AISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKD 604
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
SWN L+ G+A +G F E L+ F +M G + N T + +SA A + + K +H
Sbjct: 605 NVSWNSLVSGFAQSGYFEEALNIFAQMNKAG-LEINSFTFGSAVSAAANIANVRIGKQIH 663
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
GY V NALI +YAKCG I++ I+WN++I+G + HG G
Sbjct: 664 GMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGF 710
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
AL LF +MK +P+ +TF+G+L AC+H+GLV+EG+SYF+SM+ +++VP+ EHY C+
Sbjct: 711 EALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACV 770
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
VDLL R+G L+ A FV+ MPI+ DA++W LL +C V+KN+++ E A L ELEPK+
Sbjct: 771 VDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDS 830
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A +V++SN+Y G+W R + M+D G KK PG S +EV+ V
Sbjct: 831 ATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSV 876
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 222/465 (47%), Gaps = 42/465 (9%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ + QI + +TSG E S +I +I + ++ A+K+F+ + ++ VSW AM +G
Sbjct: 181 RFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGL 240
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+QN + ++LF Q IVL +C K+ G++LH LVLK GF +
Sbjct: 241 SQNGYEEEAMLLFCQ--------------IVLSACTKVEFFEFGKQLHGLVLKQGFSSET 286
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL---- 191
+V AL+ LYS + +A ++F M +R+ V + S+I+G G I A LF+
Sbjct: 287 YVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLD 346
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEEC 247
+ D + +++S V + ++ K D++ ++L Y D++
Sbjct: 347 CQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA 406
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
F L G +N + F +M EG + PN T ++L C
Sbjct: 407 HEFF-------------LCYGQLDN--LNKSFQIFTQMQIEG-IVPNQFTYPSILKTCTT 450
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGA D + +H G+Q NV V + LIDMYAK G +++A+ +F + D+++W +
Sbjct: 451 LGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAM 510
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDY 426
I+G H + AL+LF EM++ G D I F + AC + +++G + QS Y
Sbjct: 511 IAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGY 570
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
S I + +V L AR G++ EA ++ + D V W +L+
Sbjct: 571 SDDLSIGN--ALVSLYARCGKVREAYAAFDQIYAK-DNVSWNSLV 612
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 199/446 (44%), Gaps = 33/446 (7%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM 91
+S Y ++I + A +FD++ +++ WN +FN + V LF +M
Sbjct: 95 RSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRM 154
Query: 92 KKLDAMPNCFTFPIVLKSCV-KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+ + F +VL+ C + R E++H + +GF ++ F+ LI+LY
Sbjct: 155 LTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGF 214
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ +A KVF + R+ V W +MI+G G A LF ++S V
Sbjct: 215 LSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLF----------CQIVLSACTKV 264
Query: 211 RNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
++L + K+ S N +++ Y+ +G++ +++F M +R+ S+N LI
Sbjct: 265 EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLI 324
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
G A G L FK+M + + P+ T+ ++LSACA +GAL K H YA G
Sbjct: 325 SGLAQQGYINRALALFKKMNLDCQK-PDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
++ V +L+D+Y KC I+ A + F D + + +F +
Sbjct: 384 TSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQ 428
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M+ G +P+ T+ IL CT +G + G + + + ++D+ A+ G
Sbjct: 429 MQIEGIVPNQFTYPSILKTCTTLGATDLG-EQIHTQVLKTGFQFNVYVSSVLIDMYAKHG 487
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLG 472
+L A+ +R+ E D V W ++
Sbjct: 488 KLDHALKIFRRLK-ENDVVSWTAMIA 512
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 170/387 (43%), Gaps = 68/387 (17%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI TQV+ +G + + Y++ +I A+ ++ +A K+F ++ + +VVSW AM GY Q++
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHD 518
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M+ + F + +C I AL +G ++H +G+ ++ +G
Sbjct: 519 KFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN 578
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
AL+ LY+ + AY F ++ ++ V W S+++G+ G A +F + E
Sbjct: 579 ALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI 638
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----------------------DVISWNT 233
+ + + VS ++ N+ +++ + K D ISWN+
Sbjct: 639 NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNS 698
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
M++GY+ +G E +LFE+M + LD V P
Sbjct: 699 MITGYSQHGCGFEALKLFEDMKQ----------------------LD----------VLP 726
Query: 294 NDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
N T V VLSAC+ +G +D F + + CV +D+ + G++
Sbjct: 727 NHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACV----VDLLGRSGLLSR 782
Query: 349 AVDVFNSMDTK-DLITWNTIISGLAMH 374
A M + D + W T++S +H
Sbjct: 783 AKRFVEEMPIQPDAMVWRTLLSACNVH 809
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 66/312 (21%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
LW ++ G ++ R+ + KL D Y GD+ +F+EMP
Sbjct: 83 TFLW--LLEGCLNSRSFYDGLKLID---------------FYLAFGDLNCAVNVFDEMPI 125
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA-RLGALDFSK 315
R++ WN + + L V F+RMLT+ F ++ VL C+ + F +
Sbjct: 126 RSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF-DERIFAVVLRGCSGNAVSFRFVE 184
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
+H +G++ + + N LID+Y K G + +A VF ++ +D ++W +ISGL+ +G
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG-------------------- 415
A+ LF ++ +L ACT + E G
Sbjct: 245 YEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCN 290
Query: 416 -LSYFQSMAMDYSIVPQIEH---------YGCMVDLLARAGRLAEAVDFVKRMPIEA--- 462
L S + + S QI H Y ++ LA+ G + A+ K+M ++
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350
Query: 463 DAVIWANLLGSC 474
D V A+LL +C
Sbjct: 351 DCVTVASLLSAC 362
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 299/568 (52%), Gaps = 50/568 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI-TDQNVVSWNAMFNGYAQN 78
Q+ Q++ + L ++ I++ + L + + +F+ + + ++W ++ Y +
Sbjct: 26 QLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ F QM P+ FP VLKSC + LR GE +H +++ G +++
Sbjct: 85 GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144
Query: 139 TALIELYSTGKAIEAA---YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
AL+ +YS ++E KVF E +V + Y+ S R +FE+ P+R
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLG-----SLRKVFEMMPKR 199
Query: 196 DVILWNTIVSG-----------------------------------YIDVRNMIEARKLF 220
D++ WNT++SG + + N+++ +++
Sbjct: 200 DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIH 259
Query: 221 DQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
+ DV ++++ YA V++ R+F +P+ + SWN +I G NG+F
Sbjct: 260 GYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFD 319
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E L F++ML ++ PN + +++ ACA L L K +H Y + + GNV + +AL
Sbjct: 320 EGLKFFQQMLI-AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASAL 378
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMYAKCG I A +F+ M+ D+++W +I G A+HG A+SLF M+ G P+
Sbjct: 379 VDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNY 438
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
+ F+ +L AC+H GLV+E YF SM DY I+P +EHY + DLL R GRL EA +F+
Sbjct: 439 VAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFIS 498
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
M IE +W+ LL +CRV+KN+ELAE ++L ++P+N +V+LSNIY GRWKD
Sbjct: 499 DMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKD 558
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++++AMRD G KK P CS IE+ V
Sbjct: 559 ARKLRIAMRDKGMKKKPACSWIEIKNKV 586
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 290/547 (53%), Gaps = 32/547 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
I T +V GL + ++ A+ + A K+FD++ D++V WN + + Y Q+
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ F M++ P+ T + SC ++ L G E+H ++ +GFR + FV
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS 245
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
AL+++Y +E A +VF +M + VV W SMINGY GD +S LF+ V
Sbjct: 246 AALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVK 305
Query: 198 ------------------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
+L V GYI +RN I+ D+ ++++ Y
Sbjct: 306 PTLTTLTSTLMACSQSAQLLEGKFVHGYI-IRNRIQP----------DIFLNSSLMDLYF 354
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G VE + +F+ MP+ SWN +I GY G F+ L F M ++ V P+ T
Sbjct: 355 KCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEM-SKSFVEPDAITFT 413
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+VL+AC++L AL+ + +H N V AL+DMYAKCG +E A VF + +
Sbjct: 414 SVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPER 473
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
DL++W ++I+ HGR AL LF EM + PD +TF+ IL AC+H GLV++GL +F
Sbjct: 474 DLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHF 533
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP-IEADAVIWANLLGSCRVYK 478
M Y I+P+IEHY C++ LL RAGRL EA + ++ P I D + + L +CR++K
Sbjct: 534 NQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHK 593
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
N++L E L + +P + + +++LSN+Y G+W +V ++ M+D G KK PGCS I
Sbjct: 594 NLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWI 653
Query: 539 EVNEVVM 545
E+NE ++
Sbjct: 654 EINEKIV 660
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 247/489 (50%), Gaps = 20/489 (4%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
+S+ L+ K LHQ +VVT GL+ Y+ +I+ YA+ +FD I + +S
Sbjct: 15 NSKSLKQGKVLHQ---KVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEIS 71
Query: 68 W-NAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCL 125
N + GY +N + + LF ++ + P+ +T+P VLK+C + + G+ +H
Sbjct: 72 LCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTC 131
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
++K G +I VG++L+ +Y+ E A K+F EM +++V W ++I+ Y G A
Sbjct: 132 LVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEA 191
Query: 186 RCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSG 237
F E D + T +S + ++ R++ ++ + D ++
Sbjct: 192 LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDM 251
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G +E +FE+MP + V +WN +I GY G + FKRM +EG V P T
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG-VKPTLTT 310
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ + L AC++ L K+VH Y N Q ++ + ++L+D+Y KCG +E+A +F M
Sbjct: 311 LTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP 370
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
++WN +ISG G+ AL LF EM + PD ITF +L AC+ + +E+G
Sbjct: 371 KTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGRE 430
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC--- 474
++ ++ ++ G ++D+ A+ G + EA K +P E D V W +++ +
Sbjct: 431 -IHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYGSH 488
Query: 475 -RVYKNVEL 482
RVY+ +EL
Sbjct: 489 GRVYEALEL 497
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
++ +L A +L K +H G Q +V V LI +Y C + + A +VF+ ++
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 358 TKDLITW-NTIISGLAMHGRGAGALSLFHE-MKNAGEMPDGITFIGILCAC--------- 406
I+ N +++G + AL LF + M PD T+ +L AC
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 407 --THMGLVEEGL-----------------SYFQSMAMDYSIVP--QIEHYGCMVDLLARA 445
H LV+EGL + F+ + +P + + ++ ++
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185
Query: 446 GRLAEAVDF---VKRMPIEADAVIWANLLGSC 474
G+ EA+ + ++R E D+V + SC
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSC 217
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 304/542 (56%), Gaps = 11/542 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+E + + + + G E + ++ +I A A + AR+ FD I +++VSW M
Sbjct: 54 VECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGM 113
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
YA+N+ + + LF +M+ + PN FTF VLK+C+ + A G+ +H VLK +
Sbjct: 114 VACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCY 173
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++VG L++LY+ +VF EM + +V+ W+ MI+ Y A LF
Sbjct: 174 EMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG- 232
Query: 192 APERDVILWN-----TIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG 242
R +L N +++ + N+ +++ + K +V N ++ YA G
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
++ +LF E+P RN +WN +I GY +G + L +K ML E +V ++ T +VL
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNML-ECQVQASEVTYSSVL 351
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA L A++ +H + Y +V VGNALIDMYAKCG I+NA VF+ + +D I
Sbjct: 352 RACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEI 411
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN +ISG +MHG AL F M+ +P+ +TF+ IL AC++ GL++ G +YF+SM
Sbjct: 412 SWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSM 471
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
DY I P +EHY CMV LL R+G L +AV ++ +P+E + +W LLG+C ++ +V+L
Sbjct: 472 VQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDL 531
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
++ +++ +++P++ A V+LSNIY RW VA ++ M++ G KK PG S IE
Sbjct: 532 GIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQG 591
Query: 543 VV 544
+V
Sbjct: 592 IV 593
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 171/442 (38%), Gaps = 110/442 (24%)
Query: 161 MDERNVVVWTSMINGYIS-------------------------------------CGDIV 183
M +RN V + ++I GY+ C ++
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 184 SA--RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+ C+++L E + + ++ Y ++ AR+ FD + KD++SW M++ YA N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 242 GDVEECKRLFEEMP---------------------------------------ERNVFSW 262
++ +LF EM E +++
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 263 NGLIGGYANNGLFFEVLDAFKRM------------------------------LTEGRVF 292
GL+ Y G +VL F+ M + V
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
PN T +VL +CA + L K VH + G GNV V NAL+D+YAKCG ++N++ +
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F + ++ +TWNT+I G G G ALSL+ M +T+ +L AC + +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
E G + S+++ + ++D+ A+ G + A V M E D + W ++
Sbjct: 361 ELG-TQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMIS 418
Query: 473 SCRVYKNVELAELALERLTELE 494
++ V A A + + E E
Sbjct: 419 GYSMHGLVGEALKAFQMMQETE 440
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 279/538 (51%), Gaps = 74/538 (13%)
Query: 49 QMTYARKMF--DKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPI 105
++YA ++F ++ S+N + + + + LF +M A+ P+ T
Sbjct: 117 HLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVAN 176
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+KSC ++ L G + K GF + FV +LI +Y+
Sbjct: 177 TVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYA------------------- 217
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID----------VRNMIE 215
SCGD+V+A LF + VI WN +++GY+ + M+E
Sbjct: 218 ------------SCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLE 265
Query: 216 ARKLFDQMPKKDVIS------------W-----------------NTMLSGYANNGDVEE 246
R FD++ V + W ++ YA G++++
Sbjct: 266 VRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDK 325
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+RLF+ M R+V +W+ +I GY + E L F M V PND T+V+VLSACA
Sbjct: 326 ARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEM-QGTEVNPNDVTMVSVLSACA 384
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LGAL+ KWVH Y V +G AL+D YAKCG I++AV F SM ++ TW
Sbjct: 385 VLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTA 444
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I G+A +GR AL LF M A P +TFIG+L AC+H LVEEG +F SM DY
Sbjct: 445 LIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDY 504
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P+IEHYGCMVDLL RAG + EA F++ MPIE +AV+W LL +C V+KNVE+ E A
Sbjct: 505 GICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEA 564
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+++ L+P + N+++LSN Y +G+WK+ A ++ M++ G +K+PGCS IE+ +
Sbjct: 565 LKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTI 622
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 33/393 (8%)
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNG--------FRANIFVGTALIELYSTGKAIEAA 154
P + + ALR+ +LH +LK+G F + + S+ + A
Sbjct: 63 MPSPARQTPRRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAH-LSYA 121
Query: 155 YKVF--GEMDERNVVVWTSMINGYISCGDIVSARCLF-------ELAPERDVILWNTIVS 205
++F G R+ + +I ++ G A LF ++P++ + NT+ S
Sbjct: 122 IRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVA-NTVKS 180
Query: 206 GY----IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+ V ++A F + D N+++ YA+ GDV LF + + V +
Sbjct: 181 CSRMCDLSVGRGVQAYA-FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIA 239
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +I GY NG + EV++ FK ML E R ++ T+++V +AC RLG + +W+ YA
Sbjct: 240 WNAMIAGYVKNGDWKEVVEMFKGML-EVRAPFDEVTLLSVATACGRLGDANLGQWIAEYA 298
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
E G + + AL+DMYAKCG ++ A +F+ M ++D++ W+ +ISG R AL
Sbjct: 299 EEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREAL 358
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGCM 438
++F+EM+ P+ +T + +L AC +G +E G SY + + +++ +
Sbjct: 359 AIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT----AL 414
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
VD A+ G + +AV + MP+ + W L+
Sbjct: 415 VDFYAKCGCIKDAVKAFESMPVR-NTWTWTALI 446
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 165/370 (44%), Gaps = 23/370 (6%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+Q G ++ +I A + A +F + + V++WNAM GY +N
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ VV +F M ++ A + T V +C ++ G+ + + G + + TA
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPE 194
L+++Y+ ++ A ++F M R+VV W++MI+GY A +F E+ P
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372
Query: 195 RDVILWNTI----VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
DV + + + V G ++ + + +P VI ++ YA G +++ +
Sbjct: 373 -DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLT-VILGTALVDFYAKCGCIKDAVKA 430
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR--- 307
FE MP RN ++W LI G A+NG E L+ F ML E + P D T + VL AC+
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSML-EANIEPTDVTFIGVLLACSHGCL 489
Query: 308 --LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITW 364
G F+ Y + C ++D+ + G+I+ A +M + + + W
Sbjct: 490 VEEGRRHFTSMTQDYGICPRIEHYGC----MVDLLGRAGLIDEAYQFIRNMPIEPNAVVW 545
Query: 365 NTIISGLAMH 374
++S +H
Sbjct: 546 RALLSACTVH 555
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 304/544 (55%), Gaps = 14/544 (2%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A+S L + +H + ++ G E ++I+ ++ ++ A K+F +I D +VV
Sbjct: 341 ANSGNLRAGQIVHSLAIRI---GCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVV 397
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW+A+ Q R +F +M+ +PN FT ++ + + L GE +H V
Sbjct: 398 SWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACV 457
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY-----ISCGD 181
K GF + V AL+ +Y +++ +VF R+++ W ++++G+ G
Sbjct: 458 CKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGL 517
Query: 182 IVSARCLFE-LAPERDV---ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
+ + L E P IL + +D+ + A+ + + + D + ++
Sbjct: 518 RIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDM 576
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA N +E+ + +F + +R++F+W ++ GYA +G + + F +M EG V PN+ T
Sbjct: 577 YAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG-VKPNEFT 635
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ + LS C+R+ LD + +H A G G++ V +AL+DMYAKCG +E+A VF+ +
Sbjct: 636 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 695
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
++D ++WNTII G + HG+G AL F M + G +PD +TFIG+L AC+HMGL+EEG
Sbjct: 696 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 755
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+F S++ Y I P IEHY CMVD+L RAG+ E F++ M + ++ +IW +LG+C+++
Sbjct: 756 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMH 815
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
N+E E A +L ELEP+ +N+++LSN++ G W DV ++ M G KK PGCS
Sbjct: 816 GNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSW 875
Query: 538 IEVN 541
+EVN
Sbjct: 876 VEVN 879
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 219/460 (47%), Gaps = 11/460 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + + G ++ ++ A+ +M A ++F + QN VSWNA+ NG+AQ
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V+ LF +M + + FT VLK C LR G+ +H L ++ G + F+
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI- 198
L+++YS A KVF +++ +VV W+++I G A +F+ VI
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429
Query: 199 ---LWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
++VS D+ ++ + + K D N +++ Y G V++ R+F
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E R++ SWN L+ G+ +N L F +ML EG PN T +++L +C+ L +
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDV 548
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D K VH N GN VG AL+DMYAK +E+A +FN + +DL W I++G
Sbjct: 549 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 608
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A G+G A+ F +M+ G P+ T L C+ + ++ G SMA+
Sbjct: 609 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGD 667
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ +VD+ A+ G + +A + V + D V W ++
Sbjct: 668 MFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTII 706
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 256/556 (46%), Gaps = 31/556 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I QV+ SG+ ++ ++ A+ YA K+F +I +++VVSW A+ G+ +
Sbjct: 150 IHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY 209
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V LF +M++ N FT+ LK+C L G+++H +K G +++FVG+A
Sbjct: 210 GSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSA 269
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV--- 197
L++LY+ + A +VF M ++N V W +++NG+ GD LF ++
Sbjct: 270 LVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFS 329
Query: 198 -ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG-----YANNGDVEECKRLF 251
+T++ G + N+ A ++ + + + +S Y+ G + ++F
Sbjct: 330 KFTLSTVLKGCANSGNL-RAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVF 388
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ + +V SW+ +I G E + FKRM G V PN T+ +++SA LG L
Sbjct: 389 VRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSG-VIPNQFTLASLVSAATDLGDL 447
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ + +H G++ + V NAL+ MY K G +++ VF + +DLI+WN ++SG
Sbjct: 448 YYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGF 507
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ L +F++M G P+ TFI IL +C+ + V+ G + + S+
Sbjct: 508 HDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG-KQVHAQIVKNSLDGN 566
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+VD+ A+ L +A R+ I+ D W ++ Y E A++
Sbjct: 567 DFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG---YAQDGQGEKAVKCFI 622
Query: 492 ELEPK--NPANFVMLSNIYG-------DLGRWKDVARIKVAMRDTGF------KKLPGCS 536
+++ + P F + S++ G D GR IK F C
Sbjct: 623 QMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCG 682
Query: 537 SIEVNEVVMLGCLSRE 552
+E EVV G +SR+
Sbjct: 683 CVEDAEVVFDGLVSRD 698
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 161/351 (45%), Gaps = 71/351 (20%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L++C L EG+ +H V+K+G + + +L+ +Y+ + A KVFGE+ ER+
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 166 VVVWTSMINGYISCGDIVSARCLF-ELAPE------------------------------ 194
VV WT++I G+++ G A LF E+ E
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 195 --------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
D+ + + +V Y M+ A ++F MPK++ +SWN +L+G+A GD E
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAE- 312
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+VL+ F RM T + + T+ TVL CA
Sbjct: 313 ------------------------------KVLNLFCRM-TGSEINFSKFTLSTVLKGCA 341
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
G L + VH A G + + + L+DMY+KCG+ +A+ VF ++ D+++W+
Sbjct: 342 NSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSA 401
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
II+ L G+ A +F M+++G +P+ T ++ A T +G + G S
Sbjct: 402 IITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGES 452
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+L CA G L+ K +H +G + + N+L+++YAKCG A VF + +D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+++W +I+G G G+GA++LF EM+ G + T+ L AC+ M L E
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS-MCLDLEFGKQVH 252
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ A+ + +VDL A+ G + A MP + +AV W LL
Sbjct: 253 AEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALL 302
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 274/512 (53%), Gaps = 25/512 (4%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVL 107
M A K+FD++ +NV SWN M G+ + +F DAMP + + ++
Sbjct: 142 MVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDMF------DAMPVKDSASLGTLV 195
Query: 108 KSCVKINALREGEELHCLVLK-NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE--- 163
+K L E EEL L+ + LI Y + A ++F +
Sbjct: 196 SGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQY 255
Query: 164 -----------RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
RNVV W SM+ YI GD+ SAR +F P++D++ WNT+++GY V +
Sbjct: 256 QCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMPDKDLVSWNTMIAGYTKVSD 315
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
M EA KLF +MP D++SWN ++ G+ GDVE + F+ MPER SWN +I GY N
Sbjct: 316 MEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQN 375
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G + ++ F +ML G P+ T +VL+ACA L L +H E + +
Sbjct: 376 GHYDGAIELFTKMLEAGGT-PDRHTFSSVLAACASLPMLRLGAQLHQLIE-KSFLPDTAT 433
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NAL+ MY++ G + +A +F M KDL++WN +I G HG AL LF +M++A
Sbjct: 434 SNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEHHGCATEALQLFEDMRSARV 493
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
MP ITFI +L AC + GLV EG F +M +YSI +IEHY +V+L+ R G+L +A+
Sbjct: 494 MPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDAL 553
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ + MPI D +W LG+C KN LA +A + L++++P++ A +V++ N++ G
Sbjct: 554 EVINSMPIAPDRSVWGAFLGACTAKKNELLAHMAAKALSKIDPESSAPYVLIHNLHAHEG 613
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RW + ++ M G K PG S I++++ V
Sbjct: 614 RWGSASVVREEMEQQGIHKHPGYSWIDLHDKV 645
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 217/473 (45%), Gaps = 52/473 (10%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---ISCGDIVSARCLFE 190
++ + + + G+ + AA F M R+ V W +++ Y ++ + +AR LF+
Sbjct: 60 SVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLAAARRLFD 119
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P+RD + WNT++ Y+ M+EA KLFD+MP+++V SWNTM++G+ + G V + +
Sbjct: 120 EMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDM 179
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV---TVLSACAR 307
F+ MP ++ S L+ G+ NG E + + L RV D + T+++A +
Sbjct: 180 FDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRL---RVTDMDEAVDAYNTLIAAYGQ 236
Query: 308 LGALDFSKWVHVYAEYNGYQ----------GNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+G + ++ + YQ NV N+++ Y + G + +A ++FN M
Sbjct: 237 VGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMP 296
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
KDL++WNT+I+G A LF EM + PD +++ I+ T G VE
Sbjct: 297 DKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPD----PDIVSWNLIIRGFTQKGDVEHARG 352
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA----DAVIWANLLGS 473
+F M +I + M+ + G A++ +M +EA D ++++L +
Sbjct: 353 FFDRMPERGTI-----SWNTMISGYEQNGHYDGAIELFTKM-LEAGGTPDRHTFSSVLAA 406
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
C + L + + + + A L +Y G D I FK++P
Sbjct: 407 CASLPMLRLGAQLHQLIEKSFLPDTATSNALMTMYSRGGALTDAEAI--------FKQMP 458
Query: 534 GCSSIEVNEVV----MLGCLSRELDRKSIVRAEANMIKLLPQNNHPLTFIVVI 582
+ N ++ GC + L +R+ +++P + +TFI ++
Sbjct: 459 QKDLVSWNALIGGYEHHGCATEALQLFEDMRS----ARVMPTH---ITFISLL 504
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
II Q + +AR FD++ ++ +SWN M +GY QN + + LFT+M + P+
Sbjct: 337 IIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPD 396
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
TF VL +C + LR G +LH L+ K+ F + AL+ +YS G A+ A +F
Sbjct: 397 RHTFSSVLAACASLPMLRLGAQLHQLIEKS-FLPDTATSNALMTMYSRGGALTDAEAIFK 455
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+M ++++V W ++I GY G A LFE
Sbjct: 456 QMPQKDLVSWNALIGGYEHHGCATEALQLFE 486
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 12/210 (5%)
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR-LG 309
F+ +P R+V +WN + A F M V N T+L+A +R L
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWN-----TLLAAYSRSLN 107
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ + ++ E Q + N L+ Y + G++ A +F+ M +++ +WNT+++
Sbjct: 108 SEHLAAARRLFDEMP--QRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVT 165
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G G+ AL +F M + D + ++ G + E +
Sbjct: 166 GFFSAGQVNKALDMFDAMP----VKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMD 221
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
++ Y ++ + GR+++A +P
Sbjct: 222 EAVDAYNTLIAAYGQVGRVSDARRLFDMIP 251
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 282/535 (52%), Gaps = 72/535 (13%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAM 71
T K + QI Q+V G+ + + + + A + YA K+ + + + + N+M
Sbjct: 21 TLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSM 80
Query: 72 FNGYAQNE-----FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
Y+++ FH +L + L P+ +TF ++++C ++ A G +H V
Sbjct: 81 IRAYSKSSTPSKSFHFYANILHSNNNNLS--PDNYTFTFLVRTCAQLQAHVTGLCVHGAV 138
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K+GF + V T L+ +Y+ + + + VF E ++V T+M+N CGDI
Sbjct: 139 IKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDI---- 194
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
D ARK+FD+MP++D ++WN M++GYA G
Sbjct: 195 ----------------------DF-----ARKMFDEMPERDHVTWNAMIAGYAQCGRSR- 226
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
E LD F M EG V N+ ++V VLSAC
Sbjct: 227 ------------------------------EALDVFHLMQMEG-VKLNEVSMVLVLSACT 255
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L LD +WVH Y E + V +G AL+DMYAKCG ++ A+ VF M +++ TW++
Sbjct: 256 HLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSS 315
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
I GLAM+G G +L LF++MK G P+GITFI +L C+ +GLVEEG +F SM Y
Sbjct: 316 AIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVY 375
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I PQ+EHYG MVD+ RAGRL EA++F+ MP+ W+ LL +CR+YKN EL E+A
Sbjct: 376 GIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIA 435
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
++ ELE KN +V+LSNIY D W+ V+ ++ M+ G KKLPGCS IEV+
Sbjct: 436 QRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVD 490
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 291/514 (56%), Gaps = 13/514 (2%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ A+ + + ARK+F++I D+NVVSW +M +G QN F ++LF +M++
Sbjct: 201 FVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQD 260
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ P+ +T V+ +C + L +G +H V+K G +N F+ AL+++Y ++ A
Sbjct: 261 NVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHA 320
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYI 208
VF E+ ++V+WT+MI GY G+ + A LF +AP + + T++S
Sbjct: 321 RCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAP--NSVTTATVLSASA 378
Query: 209 DVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+R++ + + K ++ +N ++ YA V E R+F + ++V +WN
Sbjct: 379 QLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNS 438
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GYA N + + L FK+M +G P+ ++V LSA LG L K +H YA +
Sbjct: 439 MISGYAENNMGDDALMLFKQMSLQGSS-PDAISVVNALSASVCLGDLLIGKSIHGYAVKH 497
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ N+ V AL+++Y KCG + +A VF+ M+ ++ +TW +I G M G AG++ LF
Sbjct: 498 AFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLF 557
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
EM G P+ I F IL C+H G+V G YF SMA ++I P ++HY CMVD+LAR
Sbjct: 558 GEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLAR 617
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG L +A++F+ MP++AD +W L C ++ ++ AE A++R+ L P+ P +V++
Sbjct: 618 AGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLI 677
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
SN+Y G W I+ M++ G KLPGCSS+
Sbjct: 678 SNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 215/450 (47%), Gaps = 25/450 (5%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
++++ A L + AR +FD + S+ AM Q E H V L M++ P
Sbjct: 102 KLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCP 161
Query: 99 NC---FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
F + LK+C++ G LHC +K G A+ FV +L+++Y+ + +E A
Sbjct: 162 EAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECAR 220
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYID 209
KVF + +RNVV WTSMI+G + G LF + P I T+++
Sbjct: 221 KVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTI--ATVITACSA 278
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSG-----YANNGDVEECKRLFEEMPERNVFSWNG 264
+ + + R + + K+ ++S N+ +S Y G+++ + +F+E+ ++ W
Sbjct: 279 LFGLHQGRWMHGSVIKQGLMS-NSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTT 337
Query: 265 LIGGYANNGLFFEVLDAFKRMLTE--GRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
+I GY NG LDA + L + + PN T TVLSA A+L L K +H A
Sbjct: 338 MIVGYTQNG---NPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAV 394
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
G VGNAL+DMYAKC + A +F + KD++ WN++ISG A + G AL
Sbjct: 395 KLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALM 454
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF +M G PD I+ + L A +G + G S A+ ++ V I +++L
Sbjct: 455 LFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKS-IHGYAVKHAFVSNIYVDTALLNLY 513
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ G L A M + ++V W ++G
Sbjct: 514 NKCGDLLSARRVFDEMN-DRNSVTWCAMIG 542
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 179/372 (48%), Gaps = 14/372 (3%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ + V+ GL + +I+ ++ + ++ +AR +FD+++ ++V W M G
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVG 341
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y QN + LF + + PN T VL + ++ L G+ +H L +K G
Sbjct: 342 YTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEY 401
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---- 190
VG AL+++Y+ +A+ A ++FG + ++VV W SMI+GY A LF+
Sbjct: 402 NVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSL 461
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEE 246
D I +S + + +++ + + K +S +L+ Y GD+
Sbjct: 462 QGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLS 521
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+R+F+EM +RN +W +IGGY G + F ML +G V+PND ++LS C+
Sbjct: 522 ARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDG-VYPNDIAFTSILSTCS 580
Query: 307 RLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITW 364
G + K + A++ ++ ++D+ A+ G +E+A++ ++M + D W
Sbjct: 581 HSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVW 640
Query: 365 NTIISGLAMHGR 376
+ G +H R
Sbjct: 641 GAFLHGCELHSR 652
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 10/288 (3%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S QL I V GL + + + ++ A+ + ++ A ++F +I++++VV+W
Sbjct: 377 SAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAW 436
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M +GYA+N ++LF QM + P+ + L + V + L G+ +H +K
Sbjct: 437 NSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVK 496
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
+ F +NI+V TAL+ LY+ + +A +VF EM++RN V W +MI GY GD + L
Sbjct: 497 HAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHL 556
Query: 189 FELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYA 239
F + V I + +I+S + ++ FD M + I+ + M+ A
Sbjct: 557 FGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLA 616
Query: 240 NNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
G++E+ + MP + + W + G + +A KRM+
Sbjct: 617 RAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMM 664
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 294/526 (55%), Gaps = 13/526 (2%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
+ S + + ++ A + +++ A K+FD++++++V +WNAM +G +N V LF
Sbjct: 99 VRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFG 158
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+M + T VL CV + +H +K+G +FV ALI++Y
Sbjct: 159 RMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLG 218
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTI 203
+E A VF M+ R++V W S+I+G G +A +F+ ++P DV+ ++
Sbjct: 219 MLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSP--DVLTLVSL 276
Query: 204 VSGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
S + A+ L + ++ D+I+ N ++ YA ++E +R+F+ MP ++
Sbjct: 277 ASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQD 336
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
SWN LI GY NGL E ++ + M + T V+VL A + LGAL +H
Sbjct: 337 SVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMH 396
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ G +V VG LID+YAKCG + A+ +F M + WN IISGL +HG GA
Sbjct: 397 ALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGA 456
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
AL+LF M+ G PD +TF+ +L AC+H GLV++G S+F M + Y IVP +HY CM
Sbjct: 457 EALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACM 516
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
D+L RAG+L EA +F++ MPI+ D+ +W LLG+CR++ NVE+ ++A + L EL+P+N
Sbjct: 517 ADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENV 576
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V++SN+Y +G+W V ++ +R +K PG SSIEV V
Sbjct: 577 GYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSV 622
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 187/375 (49%), Gaps = 20/375 (5%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYK 156
P+ FTFP ++++ NA +LH L+ G R ++F +L+ Y I AYK
Sbjct: 68 PDGFTFPSLIRAAPS-NA--SAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYK 124
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
VF EM ER+V W +M++G A LF V VS + + ++
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184
Query: 217 RKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ L M K++ N ++ Y G +EE + +F M R++ +WN +I G
Sbjct: 185 QVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG 244
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ- 327
G L F+ M G V P+ T+V++ SA A+ G +K +H Y G+
Sbjct: 245 CEQRGQTAAALKMFQGMRGSG-VSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDV 303
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF-HE 386
++ GNA++DMYAK IE A +F+SM +D ++WNT+I+G +G A+ + H
Sbjct: 304 DDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM 363
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLAR 444
K+ G TF+ +L A +H+G +++G+ + A+ I ++ Y C++DL A+
Sbjct: 364 QKHEGLKAIQGTFVSVLPAYSHLGALQQGM---RMHALSIKIGLNVDVYVGTCLIDLYAK 420
Query: 445 AGRLAEAVDFVKRMP 459
G+LAEA+ ++MP
Sbjct: 421 CGKLAEAMLLFEKMP 435
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V GL+K ++ +I +L + A+ +F + +++V+WN++ +G Q
Sbjct: 191 MHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQ 250
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA-NIFVGT 139
+ +F M+ P+ T + + + R + LHC V++ G+ +I G
Sbjct: 251 TAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGN 310
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI- 198
A++++Y+ IEAA ++F M ++ V W ++I GY+ G A + + + +
Sbjct: 311 AIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLK 370
Query: 199 -LWNTIVS---GYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRL 250
+ T VS Y + + + ++ K DV ++ YA G + E L
Sbjct: 371 AIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLL 430
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FE+MP R+ WN +I G +G E L F RM EG + P+ T V++L+AC+ G
Sbjct: 431 FEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEG-IKPDHVTFVSLLAACSHAGL 489
Query: 311 LD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITW 364
+D F Y + C + DM + G ++ A + +M K D W
Sbjct: 490 VDQGRSFFDVMQVTYDIVPIAKHYAC----MADMLGRAGQLDEAFNFIQNMPIKPDSAVW 545
Query: 365 NTIISGLAMHG 375
++ +HG
Sbjct: 546 GALLGACRIHG 556
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
+H L+ +H + ++ GL Y+ +I A+ ++ A +F+K+ ++
Sbjct: 384 SHLGALQQGMRMHALSIKI---GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTG 440
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WNA+ +G + + LF++M++ P+ TF +L +C + +G ++
Sbjct: 441 PWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVM 500
Query: 127 LKNGFRANIFVGTA-LIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISC 179
I A + ++ ++ A+ M + + VW ++ I+G +
Sbjct: 501 QVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEM 560
Query: 180 GDIVSARCLFELAPE 194
G + S LFEL PE
Sbjct: 561 GKVASQN-LFELDPE 574
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 296/537 (55%), Gaps = 10/537 (1%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K ++ V+ G + + +I A + + A +FD++++ +VVSWN+M
Sbjct: 483 LGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSM 542
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NG N F + +F QM L + T VL + I L G LH +K F
Sbjct: 543 INGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACF 602
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ L+++YS + A +VF +M + +V WTS I Y+ G A LF+
Sbjct: 603 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDE 662
Query: 192 APER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGD 243
+ D+ +IV ++ + R + + K + S N +++ YA G
Sbjct: 663 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 722
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
VEE + +F ++P +++ SWN +IGGY+ N L E L+ F M + + P+D T+ VL
Sbjct: 723 VEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFK--PDDITMACVLP 780
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA L ALD + +H + GY ++ V AL+DMYAKCG++ A +F+ + KDLI+
Sbjct: 781 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS 840
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W +I+G MHG G A+S F+EM+ AG PD +F IL AC+H GL+ EG +F SM
Sbjct: 841 WTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMR 900
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ + P++EHY C+VDLLAR G L++A F++ MPI+ D IW LL CR++ +V+LA
Sbjct: 901 NECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLA 960
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
E E + ELEP N +V+L+N+Y + +W++V +++ M+ GFK+ PGCS IEV
Sbjct: 961 EKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEV 1017
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 257/519 (49%), Gaps = 37/519 (7%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + LE K +H + ++++G+ + + +++ + RK+FDKI + V
Sbjct: 380 AEKKSLEDGKRVHSV---IISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVF 436
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + + YA+ R V LF +M+KL + NC+TF VLK + ++E + +H V
Sbjct: 437 LWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYV 496
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LK GF +N V +LI Y +E+A+ +F E+ E +VV W SMING + G +
Sbjct: 497 LKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGL 556
Query: 187 CLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGY 238
+F L E D+ +++ + ++ N+ R L K ++V+ NT+L Y
Sbjct: 557 EIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMY 616
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+ G++ +F +M + + SW I Y GL+ + + F M ++G V P+ T+
Sbjct: 617 SKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG-VRPDIYTV 675
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+++ ACA +LD + VH Y NG N+ V NALI+MYAKCG +E A VF+ +
Sbjct: 676 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 735
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG--- 415
KD+++WNT+I G + + AL LF +M+ + PD IT +L AC + +++G
Sbjct: 736 KDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREI 794
Query: 416 ------LSYFQSMAMDYSIVPQIEHYGC-MVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
YF + H C +VD+ A+ G L A +P + D + W
Sbjct: 795 HGHILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWT 842
Query: 469 NLLGSCRV--YKNVELAELALERLTELEPKNPANFVMLS 505
++ + + N ++ R+ +EP + V+L+
Sbjct: 843 VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 209/487 (42%), Gaps = 79/487 (16%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
F T + NA N + + R + L T+ K + N ++ VL+ C + +L
Sbjct: 328 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 385
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
+G+ +H +++ NG + +G L+ + Y
Sbjct: 386 EDGKRVHSVIISNGISIDEALGAKLVFM-------------------------------Y 414
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWN 232
++CGD+V R +F+ V LWN ++S Y + N E+ LF +M K V+ ++
Sbjct: 415 VNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 474
Query: 233 TMLSGYANNGDVEECKR-----------------------------------LFEEMPER 257
+L +A G V+ECKR LF+E+ E
Sbjct: 475 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 534
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+V SWN +I G NG L+ F +ML G V + T+V+VL A A +G L + +
Sbjct: 535 DVVSWNSMINGCVVNGFSGNGLEIFIQMLILG-VEVDLTTLVSVLVAWANIGNLSLGRAL 593
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H + + V N L+DMY+KCG + A +VF M +++W + I+ G
Sbjct: 594 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLY 653
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ A+ LF EM++ G PD T I+ AC +++G S + + +
Sbjct: 654 SDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD-VHSYVIKNGMGSNLPVTNA 712
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK- 496
++++ A+ G + EA ++P++ D V W ++G Y L ALE +++ +
Sbjct: 713 LINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG---YSQNSLPNEALELFLDMQKQF 768
Query: 497 NPANFVM 503
P + M
Sbjct: 769 KPDDITM 775
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 162/347 (46%), Positives = 228/347 (65%), Gaps = 1/347 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D L + +VS Y + ++EARK+FD++ +D +N +LS YA G V+ ++LFEEMP
Sbjct: 121 DPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMP 180
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+RNV SW ++ GYA NG E ++ F M V PN+ T+ +VL ACA +GA++ +
Sbjct: 181 DRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGR 240
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
V YA G NV V NAL++MY+KCG I A VF + +DL +WN++I A+H
Sbjct: 241 KVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVH 300
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G AL+LF++++ AG PDGITF+G++ ACTH GLV EG +F SM ++S+ P+IEH
Sbjct: 301 GLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPRIEH 360
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCMVDLL RAG L E+ + MP+E DAVIW LLG+C + NVELAELA+++L LE
Sbjct: 361 YGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMDKLIHLE 420
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
P+N AN V+LSNIY G+W VA++ +++ KK G S IE++
Sbjct: 421 PQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 467
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMP 98
+++A A+ + A K+F+++ D+NVVSW AM +GYAQN H V F +M ++ P
Sbjct: 159 LLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQP 218
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N T VL +C + A+ G ++ G N++V AL+E+YS +I A++VF
Sbjct: 219 NELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVF 278
Query: 159 -GEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNM 213
G ++++ W SMI + G A LF + D I + ++ +
Sbjct: 279 QGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLV 338
Query: 214 IEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
E + FD M K + + M+ G + E L MP E + W L+G
Sbjct: 339 NEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLG 398
Query: 268 GYANNG 273
+ +G
Sbjct: 399 ACSFHG 404
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 138/299 (46%), Gaps = 48/299 (16%)
Query: 123 HCLVLKNGFRA--NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
H L++K G A + F+ +AL+ Y+ K + A KVF E+ R+ V+ ++++ Y G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-------PK-------- 225
+ SA LFE P+R+V+ W +VSGY EA + F +M P
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 226 -------------------------KDVISWNTMLSGYANNGDVEECKRLFEEM-PERNV 259
++V N +L Y+ G + + ++F+ + ++++
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WV 317
SWN +I +A +GL+ E L F ++ G V P+ T V V+ AC G ++ K +
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAG-VKPDGITFVGVILACTHGGLVNEGKLFFD 346
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ AE++ + + ++D+ + G++ + + SM + D + W ++ + HG
Sbjct: 347 SMEAEFS-LKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHG 404
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 284/545 (52%), Gaps = 72/545 (13%)
Query: 8 HSEQL----ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
H+EQL HL Q Q ++T GL++ D + R I A L +YA +F
Sbjct: 32 HAEQLLCHCTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRP 91
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
++ +N + + + R + LF ++ L P+ ++FP VLK+ V ++A+ G+++H
Sbjct: 92 SIFFYNNVIWALSSSNPTRAIS-LFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIH 150
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
C + +G +D VV TS++ Y SC +
Sbjct: 151 CQAIVSG------------------------------LDSHPSVV-TSLVQMYSSCAHLS 179
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
SAR KLFD K WN ML+GYA G+
Sbjct: 180 SAR-------------------------------KLFDGATFKHAPLWNAMLAGYAKVGN 208
Query: 244 VEECKRLFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
+ + LFE MPE R+V SW LI GY E + F+ ML + V P++ I+ V
Sbjct: 209 MSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQN-VQPDEIAILAV 267
Query: 302 LSACARLGALDFSKWVHVYAEY--NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
LSACA LGAL +W+H Y E N + V + N+LIDMYAK G I A +F +M K
Sbjct: 268 LSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHK 327
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+ITW T+ISGLA+HG G AL +F M+ A P+ +T I +L AC+H+GLVE G + F
Sbjct: 328 TIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIF 387
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM Y I P+IEHYGCM+DLL RAG L EA++ V+ MP EA+A +W +LL + Y +
Sbjct: 388 TSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGD 447
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
LA AL L+ LEP N N+ +LSN Y LG WK+ A ++ MRDT +K+PG S +E
Sbjct: 448 AALAAEALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVE 507
Query: 540 VNEVV 544
+N V
Sbjct: 508 LNNRV 512
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/347 (46%), Positives = 228/347 (65%), Gaps = 1/347 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D L + +VS Y + ++EARK+FD++ +D +N +LS YA G V+ ++LFEEMP
Sbjct: 121 DPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMP 180
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+RNV SW ++ GYA NG E ++ F M V PN+ T+ +VL ACA +GA++ +
Sbjct: 181 DRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGR 240
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
V YA G NV V NAL++MY+KCG I A VF + +DL +WN++I A+H
Sbjct: 241 KVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVH 300
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G AL+LF++++ AG PDGITF+G++ ACTH GLV EG +F SM ++S+ P+IEH
Sbjct: 301 GLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPRIEH 360
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCMVDLL RAG L E+ + MP+E DAVIW LLG+C + NVELAELA+++L LE
Sbjct: 361 YGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMDKLIHLE 420
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
P+N AN V+LSNIY G+W VA++ +++ KK G S IE++
Sbjct: 421 PQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELD 467
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMP 98
+++A A+ + A K+F+++ D+NVVSW AM +GYAQN H V F +M ++ P
Sbjct: 159 LLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQP 218
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N T VL +C + A+ G ++ G N++V AL+E+YS +I A++VF
Sbjct: 219 NELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVF 278
Query: 159 -GEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNM 213
G ++++ W SMI + G A LF + D I + ++ +
Sbjct: 279 QGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLV 338
Query: 214 IEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
E + FD M K + + M+ G + E L MP E + W L+G
Sbjct: 339 NEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLG 398
Query: 268 GYANNG 273
+ +G
Sbjct: 399 ACSFHG 404
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 138/299 (46%), Gaps = 48/299 (16%)
Query: 123 HCLVLKNGFRA--NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
H L++K G A + F+ +AL+ Y+ K + A KVF E+ R+ V+ ++++ Y G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-------PK-------- 225
+ SA LFE P+R+V+ W +VSGY EA + F +M P
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 226 -------------------------KDVISWNTMLSGYANNGDVEECKRLFEEM-PERNV 259
++V N +L Y+ G + + ++F+ + ++++
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDL 287
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WV 317
SWN +I +A +GL+ E L F ++ G V P+ T V V+ AC G ++ K +
Sbjct: 288 CSWNSMIMAFAVHGLWREALALFYKLRMAG-VKPDGITFVGVILACTHGGLVNEGKLFFD 346
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ AE++ + + ++D+ + G++ + + SM + D + W ++ + HG
Sbjct: 347 SMEAEFS-LKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHG 404
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 301/527 (57%), Gaps = 51/527 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A+ + ARK+FD + ++ VV W + + Y Q E V +F + P+
Sbjct: 194 LIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPD 253
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG---KAIEAAYK 156
+T ++ +C ++ ++R G +LH L L+ GF ++ V L+++Y+ +A++ A K
Sbjct: 254 RYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANK 313
Query: 157 VFGEMDERNVVVWTSMINGYISCGD------IVSARCLFE-LAPERDVILWNTIVSGYID 209
VF M + +V+ WT++I+GY+ G ++ L E + P I +++I+ +
Sbjct: 314 VFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH--ITYSSILKACAN 371
Query: 210 VRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
+ + R++ + K + + N ++S YA +G +EE +R+F ++ ER++ S
Sbjct: 372 ISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS---- 427
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPND------------ATIVTVLSACARLGALDF 313
+TEGR P D +T +++SA A +G L
Sbjct: 428 -------------------CITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTK 468
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ +H G+ + V N+L+ MY++CG +E+A FN + +++I+W ++ISGLA
Sbjct: 469 GQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAK 528
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG ALSLFH+M G P+ +T+I +L AC+H+GLV EG YF+SM D+ ++P++E
Sbjct: 529 HGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRME 588
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY CMVDLLAR+G + EA++F+ MP++ADA++W LLG+CR + N+E+ E+A + + EL
Sbjct: 589 HYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIEL 648
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
EP++PA +V+LSN+Y D G W +VARI+ AMRD K G S +EV
Sbjct: 649 EPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEV 695
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 11/273 (4%)
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE-RNVFSWNG 264
G + + + R L + +D + N++L+ Y+ G V + +F+ M R++ SW
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC--ARLGALDFSKWVHVYAE 322
+ A NG E L ML G + PN T+ V AC L L + + +
Sbjct: 122 MASCLARNGAERESLLLIGEMLESG-LLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHK 180
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+ ++ VG+ALIDM A+ G + +A VF+ + K ++ W +IS A+
Sbjct: 181 MGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
+F + G PD T ++ ACT +G V GL S+A+ +VD+
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGFASDACVSCGLVDMY 299
Query: 443 ARAGRLAEAVDFV----KRMPIEADAVIWANLL 471
A++ + +A+D+ +RM + D + W L+
Sbjct: 300 AKSN-IEQAMDYANKVFERMR-KNDVISWTALI 330
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + +G +++ +++ ++ + A + F+++ D+NV+SW +M +G A++
Sbjct: 470 QQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKH 529
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFV 137
+ + LF M PN T+ VL +C + +REG+E + +G +
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEH 589
Query: 138 GTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLFELA 192
+++L + ++ A + EM + + +VW +++ S +I ++A+ + EL
Sbjct: 590 YACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELE 649
Query: 193 PERDVILWNTIVSGYIDV 210
P RD + + + Y D
Sbjct: 650 P-RDPAPYVLLSNLYADA 666
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 181/489 (37%), Positives = 271/489 (55%), Gaps = 53/489 (10%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA-IEAAYKVFGEMDER 164
+L+ C+ +N L++ L ++ G F L+ + + + A +F ++
Sbjct: 61 LLERCIHLNHLKQ---LQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHVESP 117
Query: 165 NVVVWTSMINGYISCGDIVSARCLFE-------------------------LAP------ 193
NV ++T+MI Y S D SA L+ + P
Sbjct: 118 NVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMV 177
Query: 194 ---------ERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVISWNTMLSGYANNGD 243
E+ ++ ++ Y+ + +E AR LFD+M +++V+SW M+SGY G
Sbjct: 178 HCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQ 237
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT-EGRVF-----PNDAT 297
+ LFEEMPER+V SWN LI GY NGLF E L F+RM+ E + PN T
Sbjct: 238 IGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVT 297
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
V LSAC G L KW+H Y NG + V NAL+DMY KCG ++ A VF+
Sbjct: 298 AVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTL 357
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFIGILCACTHMGLVEEG 415
+ L +WN++I+ LA+HG+ A+S+F EM G PD +TFIG+L ACTH GLVE+G
Sbjct: 358 ERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKG 417
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
YF+ M +Y I PQIEHYGC+VDLL RAG+ EA++ V+ M IE D VIW +LL C+
Sbjct: 418 WLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCK 477
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++ + +LAE ++++L +++P N +ML+NIYG+LG+W +V +++ +++ K PGC
Sbjct: 478 IHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGC 537
Query: 536 SSIEVNEVV 544
S IE++ V
Sbjct: 538 SWIEIDNQV 546
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 198/413 (47%), Gaps = 54/413 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
HL Q+Q ++T G ++ + +++ C L ++YAR +FD + NV + AM Y
Sbjct: 70 HLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHVESPNVYLYTAMITAY 129
Query: 76 AQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
A + H + ++L+ M ++ PN F +P VLKSC ++ +HC VL++GF
Sbjct: 130 ASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGFEQY 189
Query: 135 IFVGTALIELY-STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
V TAL++ Y +E+A +F EM ERNVV WT+MI+GY G I +A LFE P
Sbjct: 190 PVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFEEMP 249
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW---------------------- 231
ERDV WN +++GY +EA LF +M + +W
Sbjct: 250 ERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTG 309
Query: 232 ------------------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
N ++ Y G ++E +R+F+ ER++ SWN +I
Sbjct: 310 MLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMIN 369
Query: 268 GYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWVH--VYAEYN 324
A +G + F+ M+T G V P++ T + +L+AC G L W++ + +
Sbjct: 370 CLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTH-GGLVEKGWLYFELMTQNY 428
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGR 376
G + + L+D+ + G E A++V M + D + W ++++G +HG
Sbjct: 429 GIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGH 481
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
H+ L K +H V +GL +++ ++ + + AR++FD+ ++++
Sbjct: 306 GHTGMLRLGKWIHGY---VYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLT 362
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEELHC 124
SWN+M N A + + + +F +M + P+ TF +L +C + +G
Sbjct: 363 SWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFE 422
Query: 125 LVLKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
L+ +N G I L++L E A +V M E + V+W S++NG
Sbjct: 423 LMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNG 475
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 193/569 (33%), Positives = 299/569 (52%), Gaps = 48/569 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
Q+ + SGL + R++ CA ++ +A + + + N M + +
Sbjct: 55 QLHALLTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILARASAPNAYMLATMMRAFLR 114
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV---KINALREGEELHCLVLKNGFRA- 133
LF ++ + + T +K+ + ++ GE +HC+ LK G A
Sbjct: 115 ARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVALKWGHVAQ 174
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------------- 180
++ VG AL+ Y+ +++ A +F EM +R+VV WT++++GY G
Sbjct: 175 SVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMV 234
Query: 181 -------------DIVSA----------RCLFELAPE----RDVILWNTIVSGYIDVRNM 213
+VSA R ++ + R V L N ++ +
Sbjct: 235 VAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCA 294
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
AR++FD M KDV SW TM++ YA GD+E RLF++MP RN SW+ +I Y+
Sbjct: 295 ASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQAN 354
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG-NVCV 332
E + FK M+ EG V P +A +V+VLSACA+LG LD +W++ +G V +
Sbjct: 355 QPEEAVRLFKAMIEEG-VEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNL 413
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
GNA ID+YAKCG + A +F M +++++WN++I A+HG+ L LF ++K
Sbjct: 414 GNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCI 473
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
+PD ITF+G+L AC+H GLV EG YF+ M + Y I P+ EHY CM+DLL + G L EA
Sbjct: 474 VPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAF 533
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ K MP+E D W LL +CR+Y NVE+ E A ++L +L P + +V++S IY
Sbjct: 534 EVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKN 593
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+W V ++V MR+ G KK PGCSSIEV+
Sbjct: 594 KWDQVKILRVLMRERGVKKNPGCSSIEVD 622
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 292/566 (51%), Gaps = 45/566 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++V S + +++ ++I+ ++ + A +F KI +N+ SWNA+ Y +
Sbjct: 24 QLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHN 83
Query: 80 FHRTVVVLFTQM---KKLDAMPNCFTFPIVLKSCVKINALRE-GEELHCLVLKNGFRANI 135
H ++ LF+ + D P+ FT LK+ + + +E+H +L+ G +I
Sbjct: 84 MHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDI 143
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ 189
FV ALI YS + A +F M ER++V W +M+ GY G + LF
Sbjct: 144 FVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSS 203
Query: 190 -ELAP---------------------------------ERDVILWNTIVSGYIDVRNMIE 215
E+ P + DV LWN ++ Y ++
Sbjct: 204 LEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDY 263
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
AR+LF++M +KD I++ +M+SGY +G V + LF E + +WN +I G N
Sbjct: 264 ARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQ 323
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+D F+ M + G PN T+ ++L + L K +H YA N Y N+ V A
Sbjct: 324 EGAVDIFRAMQSHG-CRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATA 382
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
+ID YAKCG + A VF+ + + LI W +IIS A+HG ALSLF+EM G PD
Sbjct: 383 IIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPD 442
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
+TF +L AC H G ++E F + +Y I P +EHY CMV +L+RAG+L++AV+F+
Sbjct: 443 QVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFI 502
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+MP+E A +W LL V +VEL + +RL E+EP+N N+V+++N+Y GRWK
Sbjct: 503 SKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWK 562
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEVN 541
D I+ M++ KK+PG S IE +
Sbjct: 563 DADTIRDLMKEVRLKKIPGNSWIETS 588
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 161/384 (41%), Gaps = 105/384 (27%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+++ C R G++LH ++ + + F+G+ LI YS +I AY VFG++ +N
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 166 VVVWTSMINGYISCGDIVSARCLF---------ELAPER--------------------- 195
+ W +++ Y LF ++ P+R
Sbjct: 69 IFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAK 128
Query: 196 -------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
D+ + N +++ Y ++ AR +FD+MP++D++SWN ML+GY+ G
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGG 188
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
E+CK L F+ ML+ V PN T V+VL
Sbjct: 189 SYEKCKEL-------------------------------FRVMLSSLEVKPNALTAVSVL 217
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA+ L F VH + + + +V + NA+I +YAKCG ++ A ++F M KD I
Sbjct: 218 QACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAI 277
Query: 363 -------------------------------TWNTIISGLAMHGRGAGALSLFHEMKNAG 391
TWN +ISGL + R GA+ +F M++ G
Sbjct: 278 TYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHG 337
Query: 392 EMPDGITFIGILCACTHMGLVEEG 415
P+ +T IL +H ++ G
Sbjct: 338 CRPNTVTLASILPVFSHFSTLKGG 361
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
T K +I + + +++ Y+ II + A+ + A+ +FD+I +++++W
Sbjct: 353 SHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWT 412
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLK 128
++ + YA + + LF +M P+ TF VL +C L E ++ + L+ +
Sbjct: 413 SIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPE 472
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARC 187
G + + ++ + S + A + +M E VW +++NG GD+ +
Sbjct: 473 YGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKY 532
Query: 188 ----LFELAPE 194
LFE+ PE
Sbjct: 533 VFDRLFEIEPE 543
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 240/403 (59%), Gaps = 1/403 (0%)
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
++ Y +E A F +M ++ W +MI G+ + AR LF + P ++V+ W
Sbjct: 44 MLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTW 103
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++SGY++ ++ A KLF++ P K V++W M++GY G + +RLFE+MPE+N+
Sbjct: 104 NAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLV 163
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+WN +I GY N + + F+ M+ G + PN +T+ + L C+ L AL + VH
Sbjct: 164 TWNAMIAGYIENHRAEDGVKLFRTMVGFG-IQPNSSTLSSALLGCSELSALQLGRQVHQL 222
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+ + G +LI MY KCG++E+ +F + +D++TWN +ISG A HG G A
Sbjct: 223 VCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKA 282
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L LF EM G PD ITF+ +L AC H G + G+ YF SMA DY +V + +HY CMVD
Sbjct: 283 LGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVD 342
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG+L EAVD +++MP + A ++ LLG+CR++KN E+AE A ++L L+P +
Sbjct: 343 LLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATG 402
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+V L+N+Y RW VAR++ +M+ K PG S IEV +
Sbjct: 403 YVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSM 445
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 49/351 (13%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
++ A+++F KI + + VS+N M + Y +N F M D ++ ++
Sbjct: 22 KLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTP----SWNTMIT 77
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+ + + +L ++ N+ A+I Y +++A K+F + ++VV
Sbjct: 78 GFAQNQQMDKARDLFLIMPTK----NVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVA 133
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----- 223
WT+MI GY+ G I A LFE PE++++ WN +++GYI+ + KLF M
Sbjct: 134 WTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGI 193
Query: 224 -PKK---------------------------------DVISWNTMLSGYANNGDVEECKR 249
P D + +++S Y G +E+ +
Sbjct: 194 QPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWK 253
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF ++P R+V +WN +I GYA +G + L F M+ +G + P+ T V VL AC G
Sbjct: 254 LFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKG-MKPDWITFVAVLMACNHAG 312
Query: 310 ALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
D K+ H A+ G ++D+ + G + AVD+ M K
Sbjct: 313 FTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 43/312 (13%)
Query: 161 MDERNVVVWTSMINGYISC-GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M + V W S++ G G + A+ LF PE D + +NT++S Y+ NM A+
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
F+ MP KD SWNTM++G+A N +++ + LF MP +NV +WN +I GY G L
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSAL 120
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
F++ A +V++ W A+I
Sbjct: 121 KLFEK-----------APFKSVVA------------W-----------------TAMITG 140
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y K G I A +F M K+L+TWN +I+G + R + LF M G P+ T
Sbjct: 141 YMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTL 200
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
L C+ + ++ G Q + + ++ + + G L + ++P
Sbjct: 201 SSALLGCSELSALQLGRQVHQ-LVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVP 259
Query: 460 IEADAVIWANLL 471
D V W ++
Sbjct: 260 -RRDVVTWNAMI 270
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT +L ++ A ++F+K+ ++N+V+WNAM GY +N V LF M PN
Sbjct: 137 MITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPN 196
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T L C +++AL+ G ++H LV K+ + GT+LI +Y +E +K+F
Sbjct: 197 SSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFV 256
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL-WNTIV--------SGYID- 209
++ R+VV W +MI+GY G+ A LF+ E+ + W T V +G+ D
Sbjct: 257 QVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDL 316
Query: 210 -VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V+ K + + K D + M+ G + E L E+MP
Sbjct: 317 GVKYFHSMAKDYGLVAKPD--HYTCMVDLLGRAGKLVEAVDLIEKMP 361
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 287/528 (54%), Gaps = 41/528 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +FD + + + ++ H ++ F+ M + A P+V KSC
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ +G ++HC L G ++FV TAL++ Y+ +E+A F EM ++ + +
Sbjct: 83 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCL 142
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDV 228
I GY GD+ AR LF+ R WN++++ Y EA LFD+M + +
Sbjct: 143 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNA 202
Query: 229 ISWNTMLSGYANNGD----------------------------------VEECKRLFEEM 254
I+ ++ S A +GD +++ +R F+ M
Sbjct: 203 ITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRM 262
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRM-LTEGRVFPNDATIVTVLSACARLGALDF 313
+R+V +W+ +I GYA NG E L+ F+RM T+ R PN+ T+V V+SACA+LG+ +
Sbjct: 263 SQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCR--PNEVTLVGVISACAQLGSDEL 320
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ + YAE +G+ALIDMY +CG + A VF+ M+ K +ITWN++I GLAM
Sbjct: 321 VEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAM 380
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
+G A+SL+ +M G P+ ITF+ +L ACTH GLV++G+++F+ M ++ + PQ+E
Sbjct: 381 NGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVE 440
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H C+VDLL ++G L EA F+ M +E +AVIW LL SCR + +VELA+LA +L +
Sbjct: 441 HCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAM 500
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EP N + +V+LSNIY D G W D I+ MR +KL S I+++
Sbjct: 501 EPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLD 548
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 20/350 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ + AR++FD + + SWN+M YA R + LF +M A PN
Sbjct: 142 LITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPN 201
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V C K L G+ + L+ ++ + N+ V TAL+E+Y +AI+ A + F
Sbjct: 202 AITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFD 260
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M +R+VV W++MI GY G + + LFE D + G I + + +L
Sbjct: 261 RMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDEL 320
Query: 220 FDQM------PKKDVISW--NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+Q+ + + S+ + ++ Y G V + +F M ++ V +WN +I G A
Sbjct: 321 VEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAM 380
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGY 326
NG + + +++M G V PN+ T V +L+AC G +D F + +
Sbjct: 381 NGFAEDAISLYEKMAENG-VQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQV 439
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ C+ +D+ K G + A M+ + + + W T++S H
Sbjct: 440 EHCACI----VDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHA 485
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + + QI L + Y+ +I + + AR +F ++ + V++WN+
Sbjct: 314 QLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNS 373
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EELHCLV 126
M G A N F + L+ +M + PN TF +L +C + +G EE+
Sbjct: 374 MIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMK--- 430
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI--- 182
++ + +++L + AYK +M+ E N V+WT++++ + D+
Sbjct: 431 REHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELA 490
Query: 183 -VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
+++R L + P+ I + + + Y D +AR++ D M K+V
Sbjct: 491 KLASRKLLAMEPDNSSI-YVLLSNIYADAGLWGDAREIRDLMRSKNV 536
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 284/528 (53%), Gaps = 40/528 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +FD + A + ++ H+ ++ + + + P+VLKSC
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCAL 90
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
A +G + HC L G ++FV TAL++ Y+ +++A F EM ++ + +
Sbjct: 91 SAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCL 150
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DV 228
I GY GD+ AR LF+ P + WN++++ Y EA LFDQM ++ +
Sbjct: 151 ITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 229 ISWNTMLSGYANNGDVE----------------------------------ECKRLFEEM 254
I+ T+ S A GD+E E +R F+ M
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRM 270
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P R+V +W+ +I GY++NG E L+ F+RM PN+ T+V VLSACA+LG+ +
Sbjct: 271 PRRDVVAWSTMIAGYSHNGRPHESLELFERM-KATNCKPNEVTLVGVLSACAQLGSDELG 329
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ + Y E +G+ALIDMY KCG + A DVF+ M+ K +I WN++I GLA++
Sbjct: 330 EQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALN 389
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS-IVPQIE 433
G A++L+ EM G P+ ITF+ +L ACTH GLV++G+++FQ M + PQ+E
Sbjct: 390 GFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVE 449
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H C+VDLL ++GRL EA F+ M +E +AVIW LL +CR + +VELA+LA +L L
Sbjct: 450 HCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVL 509
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EP + + +V+LSNIY D G W DV I+ MR +KL S IE++
Sbjct: 510 EPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 557
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 156/350 (44%), Gaps = 19/350 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+IT ++ + AR++FD + + SWN+M YA + + LF QM + A PN
Sbjct: 150 LITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPN 209
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T V C K L G V + + N+ V TAL+E+Y +AI+ A + F
Sbjct: 210 AITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAIDEARREFD 268
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M R+VV W++MI GY G + LFE + + G + + + +L
Sbjct: 269 RMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDEL 328
Query: 220 FDQ---------MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+Q +P + + ++ Y G V + +F M ++ V +WN +I G A
Sbjct: 329 GEQIGSYIESQTLPLTSYLG-SALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLA 387
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD----FSKWVHVYAEYNGY 326
NG + + + M+ +G V PN+ T + +L+AC G +D F + + ++
Sbjct: 388 LNGFAEDAIALYGEMVGDG-VQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASP 446
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
Q C ++D+ K G + A M+ + + + W T++S H
Sbjct: 447 QVEHCA--CIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHA 494
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + QI + + + L + Y+ +I + + AR +F ++ + V++WN+
Sbjct: 322 QLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNS 381
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G A N F + L+ +M PN TF +L +C + +G + KN
Sbjct: 382 MIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNK 441
Query: 131 FRANIFVG--TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARC 187
A+ V +++L + AYK +M+ E N V+WT++++ + D+ A+
Sbjct: 442 QHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAK- 500
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMI-------EARKLFDQMPKKDV 228
LA + V+L S Y+ + N+ + R++ D M K++
Sbjct: 501 ---LAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNL 545
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 251/411 (61%), Gaps = 8/411 (1%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
N A+I Y ++A +F +M R V W MI+G+ GD +AR F+ P
Sbjct: 30 NAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDVP 89
Query: 194 E--RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
R+V+ W +V GY M AR++F+ MP+++ +W++M+SGY G+V+E + +F
Sbjct: 90 SELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIF 149
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ +P RN+ +WN LI GYA NG E L+AF +M EG P++ TI +VLSAC++LG L
Sbjct: 150 DRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEG-FEPDEVTIASVLSACSQLGLL 208
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D K +H + G + N V N L+DMYAKCG + NA +F M ++ WN++ISG
Sbjct: 209 DAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGF 268
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A+HG+ AL F M+++ E PD ITF+ +L AC H G V GL F M Y +
Sbjct: 269 AIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRME-KYGLTTG 327
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
I+HYGC++DLL RAGR+ EA D +KRMP++ + V+W LLG+CRV+ ++E+A+ +E +
Sbjct: 328 IKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDMEMADRVVEEIV 387
Query: 492 ELEPK----NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
+++ +++V+LSNIY RW+ ++++ M + GF+K GCSSI
Sbjct: 388 KVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSI 438
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 172/379 (45%), Gaps = 47/379 (12%)
Query: 36 ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
I ++ A+ + +RK+FD + ++N V+WNAM GY N ++ V+LF +M
Sbjct: 2 IGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRT 61
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
A+ +S A R +++ + N+ T +++ Y+ +EAA
Sbjct: 62 AVTWIEMIDGFARSGDTETARRFFDDVPSEL------RNVVTWTVMVDGYARNAEMEAAR 115
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
+VF M +RN W+SMI+GY G++ AR +F+ P R+++ WN+++SGY E
Sbjct: 116 EVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEE 175
Query: 216 ARKLFDQMP----KKDVISWNTMLSG---------------------------------- 237
A + F +M + D ++ ++LS
Sbjct: 176 ALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVD 235
Query: 238 -YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA GD+ + +FE M RN WN +I G+A +G E L+ F RM + P++
Sbjct: 236 MYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRM-EDSHEGPDEI 294
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T ++VLSACA G ++ + E G + LID+ + G I+ A D+ M
Sbjct: 295 TFLSVLSACAHGGFVNAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRM 354
Query: 357 DTK-DLITWNTIISGLAMH 374
K + + W ++ +H
Sbjct: 355 PVKPNDVVWGALLGACRVH 373
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K +H + G++ + ++ ++ A+ + AR +F+ + +N WN+M
Sbjct: 208 LDAGKKIHHMMNH---KGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSM 264
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+G+A + + + F +M+ P+ TF VL +C + G E+ + K G
Sbjct: 265 ISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRMEKYGL 324
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMI 173
I LI+L I+ AY + M + N VVW +++
Sbjct: 325 TTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALL 367
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 308/572 (53%), Gaps = 17/572 (2%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A++ L K LH + + SG E +++ ++ ++ + A K+F KI + +VV
Sbjct: 62 ANTGSLREGKVLHAL---ALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVV 118
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+W+AM G Q + LF M++ A PN FT ++ + + LR G+ +H +
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI---SCGDIV 183
K GF ++ V LI +Y + +E KVF M ++V W ++++G+ +CG
Sbjct: 179 CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR-- 236
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEAR-------KLFDQMPKKDVISWNTMLS 236
R +++ E T +S ++++ + D ++
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA +E+ F+ + R++FSW +I GYA + + F++M EG + PN+
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREG-IKPNEY 355
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+ + LS C+ + L+ + +H A G+ G++ VG+AL+D+Y KCG +E+A +F +
Sbjct: 356 TLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
++D+++WNTIISG + HG+G AL F M + G MPD TFIG+L AC+ MGLVEEG
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK 475
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
F SM+ Y I P IEHY CMVD+L RAG+ E F++ M + ++IW +LG+C++
Sbjct: 476 KRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKL 535
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ NV+ E A ++L E+EP +++++LSNI+ GRW DV I+ M G KK PGCS
Sbjct: 536 HGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCS 595
Query: 537 SIEVNEVVMLGCLSRELDRKSIVRAEANMIKL 568
+EV+ V + LS++ I A + KL
Sbjct: 596 WVEVDGQVHV-FLSQDGSHPKIREIYAKLDKL 626
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 222/453 (49%), Gaps = 26/453 (5%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
M A ++F + ++N VSWNA+ NGYAQ + V+ LF +MK+ + + FT VLK
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C +LREG+ LH L L++G + F+G +L+++YS + A KVF ++ +VV W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 170 TSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
++MI G G A LF L + + +++VS ++ ++ + + + K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 226 ----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
D + N ++ Y + VE+ ++FE M ++ SWN L+ G+ ++
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F +ML EG PN T ++VL +C+ L +F K VH + N + VG AL+DMYA
Sbjct: 241 FYQMLLEG-FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
K +E+A F+ + +D+ +W IISG A + A+ F +M+ G P+ T
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG------CMVDLLARAGRLAEAVDFV 455
L C+HM +E G +++ + H+G +VDL + G + A
Sbjct: 360 CLSGCSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIF 412
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
K + I D V W ++ Y E ALE
Sbjct: 413 KGL-ISRDIVSWNTIISG---YSQHGQGEKALE 441
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 290/534 (54%), Gaps = 17/534 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I Q V G + + I+ + ++ ARK+FD++ +++ + WN M +GY +NE
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 81 HRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + +F + +LD T +L + ++ LR G ++H L K G ++
Sbjct: 201 YVESIQVFRDLINESCTRLDTT----TLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-EL--- 191
+V T I LYS I+ +F E + ++V + +MI+GY S G+ + LF EL
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 192 -APERDVILWNTI-VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
A R L + + VSG++ + I L +S + + Y+ ++E ++
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVS-TALTTVYSKLNEIESARK 375
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+E PE+++ SWN +I GY NGL + + F+ M + PN TI +LSACA+LG
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSACAQLG 434
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL KWVH ++ ++ V ALI MYAKCG I A +F+ M K+ +TWNT+IS
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +HG+G AL++F+EM N+G P +TF+ +L AC+H GLV+EG F SM Y
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY CMVD+L RAG L A+ F++ M IE + +W LLG+CR++K+ LA E+
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
L EL+P N V+LSNI+ + A ++ + K PG + IE+ E
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 208/466 (44%), Gaps = 16/466 (3%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL Q Q++ G + ++ + L + YAR +F + +V +N + G++
Sbjct: 35 HLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFS 94
Query: 77 QNEFHRTVVVLFTQMKK-LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
NE + + +F ++K D PN T+ + + R G +H + +G + +
Sbjct: 95 VNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSEL 154
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-----E 190
+G+ ++++Y +E A KVF M E++ ++W +MI+GY V + +F E
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----YANNGDVEE 246
D I+ +++ + ++ K S + +L+G Y+ G ++
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LF E + ++ ++N +I GY +NG L FK ++ G +T+V+++
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL-RSSTLVSLVPVS- 332
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
G L +H Y + + + V AL +Y+K IE+A +F+ K L +WN
Sbjct: 333 --GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISG +G A+SLF EM+ + P+ +T IL AC +G + G + +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRST 449
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
I ++ + A+ G +AEA M + + V W ++
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMIS 494
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 290/532 (54%), Gaps = 39/532 (7%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+A ++F+ + +++VVSWN M + +Q+ R + + M + T+ L +C
Sbjct: 246 HALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACA 305
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
K+++L G++LH V+++ + +V +A++ELY+ + A +VF + +RN V WT
Sbjct: 306 KLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTV 365
Query: 172 MINGYISCG-----------------------------------DIVSARCLFELAPE-- 194
+I G++ G D+ AR L L+ +
Sbjct: 366 LIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSG 425
Query: 195 --RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
R V++ N+++S Y N+ A +F M ++D++SW ML+ Y+ G++ + + F+
Sbjct: 426 HTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFD 485
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M RNV +WN ++G Y +G + L + MLTE V P+ T VT+ CA +GA
Sbjct: 486 GMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANK 545
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ + G + V NA+I MY+KCG I A +F+ + KDL++WN +I+G +
Sbjct: 546 LGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYS 605
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G A+ +F +M G PD I+++ +L +C+H GLV+EG YF + D+++ P +
Sbjct: 606 QHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGL 665
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH+ CMVDLLARAG L EA + + MP++ A +W LL +C+ + N ELAELA + L +
Sbjct: 666 EHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFD 725
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+ + +++L+ IY D G+ D A+++ MRD G KK PG S +EV V
Sbjct: 726 LDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKV 777
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 212/448 (47%), Gaps = 51/448 (11%)
Query: 29 GLEKSDYITPRIIT------ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHR 82
GL + D P +IT A+L ++ A ++F ++ ++V SWN + +GY Q+
Sbjct: 84 GLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFL 143
Query: 83 TVVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
+ F M++ D++PN FTF +KSC + +L L+ K GF+ + V T +
Sbjct: 144 DAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGI 203
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
++++ A++ A K F +++ V SM+ GY + A LFE PERDV+ WN
Sbjct: 204 VDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWN 263
Query: 202 TIVSGY-------------IDVRN----------------------MIEARKLFDQ---- 222
+VS +D+ N + ++L Q
Sbjct: 264 MMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS 323
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+P D + M+ YA G +E +R+F + +RN SW LIGG+ G F E L+ F
Sbjct: 324 LPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELF 383
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+M E A + T++S C+ + ++ +H + +G+ V + N+LI MYAK
Sbjct: 384 NQMRAELMTVDQFA-LATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAK 442
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG ++NA +F+SM+ +D+++W +++ + G A F M + IT+ +
Sbjct: 443 CGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMST----RNVITWNAM 498
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVP 430
L A G E+GL + +M + ++P
Sbjct: 499 LGAYIQHGAEEDGLKMYSAMLTEKDVIP 526
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 178/401 (44%), Gaps = 49/401 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ QV+ S Y+ ++ A+ AR++F + D+N VSW + G+ Q
Sbjct: 315 QLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYG 374
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF QM+ + F ++ C + +LH L LK+G + +
Sbjct: 375 CFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN 434
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI +Y+ ++ A +F M+ER++V WT M+ Y G+I AR F+ R+VI
Sbjct: 435 SLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVIT 494
Query: 200 WNTIVSGYIDVRNMIEARKLFDQM-PKKDVI-SW-------------------------- 231
WN ++ YI + K++ M +KDVI W
Sbjct: 495 WNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHT 554
Query: 232 ------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
N +++ Y+ G + E +++F+ + +++ SWN +I GY+ +G+ + +
Sbjct: 555 VKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAI 614
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG----NA 335
+ F ML +G P+ + V VLS+C+ G + K+ Y + NV G +
Sbjct: 615 EIFDDMLKKG-AKPDYISYVAVLSSCSHSGLVQEGKF---YFDMLKRDHNVSPGLEHFSC 670
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLI-TWNTIISGLAMHG 375
++D+ A+ G + A ++ + M K W ++S HG
Sbjct: 671 MVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 711
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 177/439 (40%), Gaps = 79/439 (17%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-STGKAIEAAYKVFGEMDERN 165
L+SC AL LH ++ G + +F+ L+ Y S G +A + G++ E N
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA-------RK 218
V+ M+NGY G + A LF P RDV WNT++SGY ++A R+
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154
Query: 219 LFDQMPKK----------DVISWNT-------MLSGYANNGD----------------VE 245
D +P + W+ +L+ + GD V+
Sbjct: 155 SGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVD 214
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM---------------LTEGR 290
+ F ++ VF N ++ GYA + L+ F+ M GR
Sbjct: 215 FASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGR 274
Query: 291 ---------------VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
V + T + L+ACA+L +L + K +H + + V +A
Sbjct: 275 AREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASA 334
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
++++YAKCG + A VF+S+ ++ ++W +I G +G + +L LF++M+ D
Sbjct: 335 MVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVD 394
Query: 396 GITFIGILCACTH---MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
I+ C++ M L + S+++ + ++ + A+ G L A
Sbjct: 395 QFALATIISGCSNRMDMCLARQ----LHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAE 450
Query: 453 DFVKRMPIEADAVIWANLL 471
M E D V W +L
Sbjct: 451 SIFSSME-ERDIVSWTGML 468
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 290/540 (53%), Gaps = 17/540 (3%)
Query: 11 QLETTK---HLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQN 64
QLE + L+Q+ ++ S + ++ R+I T C + ++YAR +F+ I +
Sbjct: 12 QLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPS 71
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V WN+M GY+ + ++ + +M + P+ FTFP VLK+C + ++ G +H
Sbjct: 72 VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHG 131
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K GF N++V T L+ +Y + +VF ++ + NVV W S+I+G+++
Sbjct: 132 FVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSD 191
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYAN 240
A F V TI+ V ++ + FD + +VI +++ YA
Sbjct: 192 AIEAFREMQSNGVKANETIM-----VDLLVACGRCFDPYFQSKVGFNVILATSLIDMYAK 246
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
GD+ + LF+ MPER + SWN +I GY+ NG E L F ML G + P+ T ++
Sbjct: 247 CGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG-IAPDKVTFLS 305
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
V+ A G + +H Y G+ + + AL++MYAK G E+A F ++ KD
Sbjct: 306 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 365
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACTHMGLVEEGLSYF 419
I W +I GLA HG G ALS+F M+ G PDGIT++G+L AC+H+GLVEEG YF
Sbjct: 366 TIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYF 425
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M + + P +EHYGCMVD+L+RAGR EA VK MP++ + IW LL C +++N
Sbjct: 426 AEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHEN 485
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+EL + + E E +V+LSNIY GRW DV I+ +M+ K+ G SS+E
Sbjct: 486 LELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 545
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 291/533 (54%), Gaps = 13/533 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ VV +G ++ +I +++ + AR +FDKI +++VVSW+ M Y ++
Sbjct: 145 EVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSG 204
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF--RANIFV 137
+ L M + P+ + ++ L+ G+ +H V++NG ++ + +
Sbjct: 205 LLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL 264
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-----ELA 192
TALI++Y + + A +VF + + +++ WT+MI YI C ++ LF E
Sbjct: 265 CTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGM 324
Query: 193 PERDVILWNTI----VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
++ + + + +G +++ ++ A L + V++ + Y GDV +
Sbjct: 325 FPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLA-TAFIDMYGKCGDVRSAR 383
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ +++ W+ +I YA N E D F M G + PN+ T+V++L CA+
Sbjct: 384 SVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG-IRPNERTMVSLLMICAKA 442
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
G+L+ KW+H Y + G +G++ + + +DMYA CG I+ A +F +D+ WN +I
Sbjct: 443 GSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMI 502
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SG AMHG G AL LF EM+ G P+ ITFIG L AC+H GL++EG F M ++
Sbjct: 503 SGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGF 562
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P++EHYGCMVDLL RAG L EA + +K MP+ + ++ + L +C+++KN++L E A +
Sbjct: 563 TPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAK 622
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ LEP V++SNIY RW DVA I+ AM+D G K PG SSIEVN
Sbjct: 623 QFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVN 675
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/568 (24%), Positives = 236/568 (41%), Gaps = 110/568 (19%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ Y +N ++ M+ D + F P VLK+C I + G+E+H V+KNG
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----- 185
F ++FV ALI +YS ++ A +F +++ ++VV W++MI Y G + A
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 186 ------------------RCLFELAP------------------ERDVILWNTIVSGYID 209
L ELA + V L ++ Y+
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
N+ AR++FD + K +ISW M++ Y + ++ E RL
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRL------------------- 315
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
F +ML EG +FPN+ T+++++ C GAL+ K +H + NG+ +
Sbjct: 316 ------------FVKMLGEG-MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLS 362
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ + A IDMY KCG + +A VF+S +KDL+ W+ +IS A + A +F M
Sbjct: 363 LVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTG 422
Query: 390 AGEMPDGITFIGILCACTHMGLVEEG---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
G P+ T + +L C G +E G SY + ++ + VD+ A G
Sbjct: 423 CGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTS----FVDMYANCG 478
Query: 447 RLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVELAELALERLTELEP----KNPA 499
+D R+ EA D +W ++ ++ + E ALE E+E N
Sbjct: 479 D----IDTAHRLFAEATDRDISMWNAMISGFAMHGH---GEAALELFEEMEALGVTPNDI 531
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAM-RDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSI 558
F+ + G ++ R+ M + GF +V GC+ L R +
Sbjct: 532 TFIGALHACSHSGLLQEGKRLFHKMVHEFGFTP----------KVEHYGCMVDLLGRAGL 581
Query: 559 VRAEANMIKLLPQNNHPLTFIVVIFSTF 586
+ +IK +P + + +F +F
Sbjct: 582 LDEAHELIKSMPMRPN-----IAVFGSF 604
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 295/538 (54%), Gaps = 21/538 (3%)
Query: 20 QIQTQVVTSGL--EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA- 76
QI V+TS + + D R++ C Q YAR++ +I ++ W+++ ++
Sbjct: 20 QIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFSG 79
Query: 77 QNEFHRTVVVL-FTQMKKLDAMPNCFTFPIVLKSCVKINALREGE--ELHCLVLKNGFRA 133
+ +R + L + QM++ +P+ TFP +LK+ K LR+ + H +LK GF +
Sbjct: 80 RVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFK---LRDANPFQFHAHILKFGFDS 136
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
++FV +LI YS E +VF ++++VV WT+MI+G++ + A F +
Sbjct: 137 DLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYF-VEM 195
Query: 194 ERDVILWN--TIVSGYIDVRNMIEAR--------KLFDQMPKKDVISWNTMLSGYANNGD 243
+R + N T+VS R + R L + DV ++++ Y G
Sbjct: 196 KRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGC 255
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
++ +++F+EMP RNV +W LI GY F + + F+ ML + V PN+ T+ +VLS
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEML-KSDVAPNEKTLSSVLS 314
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA +GAL + VH Y N + N VG LID YAKCG +E A+ VF + K++ T
Sbjct: 315 ACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYT 374
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W +I+G A HG GA+ LFH M ++ P+ +TFI +L AC H GLVEEG F SM
Sbjct: 375 WTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMK 434
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+++ P+ +HY CMVDL R G L EA ++RMP+E +W L GSC ++K+ EL
Sbjct: 435 ERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELG 494
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ A R+ +L+P + + +L+N+Y + W DVAR++ M+D K PGCS IEV
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVK 552
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 284/507 (56%), Gaps = 30/507 (5%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
K+ A ++FDK+ D++V+SWN+M +GY N + ++ QM L + T VL
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
C L G+ +H L +K+ F I L+++YS ++ A +VF +M ERNVV
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 168 VWTSMINGYI----SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
WTSMI GY S G I+ + + + + DV+ +I+ ++ + + D +
Sbjct: 319 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 224 PKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
++ S N ++ YA G +E +F M +++ SWN ++
Sbjct: 379 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------------- 425
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
G + P+ T+ +L ACA L AL+ K +H Y NGY + V NAL+D+
Sbjct: 426 ---------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 476
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y KCG++ A +F+ + +KDL++W +I+G MHG G A++ F+EM++AG PD ++F
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
I IL AC+H GL+E+G +F M D++I P++EHY CMVDLL+R G L++A F++ +P
Sbjct: 537 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLP 596
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
I DA IW LL CR+Y ++ELAE ER+ ELEP+N +V+L+NIY + + ++V R
Sbjct: 597 IAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKR 656
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVVML 546
++ + G +K PGCS IE+ V L
Sbjct: 657 MREKIGKKGLRKNPGCSWIEIKGRVNL 683
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 208/442 (47%), Gaps = 54/442 (12%)
Query: 32 KSDYITPRIITACAQLK-QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
K+ + +P I +C ++ T R + ++TD N + G +N +V Q
Sbjct: 38 KTTFFSP-IFRSCIPVRISATPTRTIDHQVTDYNAKILHFCQLGDLENAME---LVCMCQ 93
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+L+ T+ VL+ C + +L +G+++H ++ N + +G L+ Y+T
Sbjct: 94 KSELETK----TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGD 149
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ +VF M+++NV +W M++ Y GD + CLF++ E+ I+
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEG 198
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ A +LFD++ +DVISWN+M+SGY +NG + ER
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNG-----------LTERG------------ 235
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
L +K+M+ G + + ATI++VL CA G L K VH A + ++ +
Sbjct: 236 --------LGIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI 286
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N L+DMY+KCG ++ A+ VF M +++++W ++I+G G GA+ L +M+
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKE 346
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G D + IL AC G ++ G + + ++ + ++D+ A+ G +
Sbjct: 347 GVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN-NMASNLFVCNALMDMYAKCGSMEG 405
Query: 451 AVDFVKRMPIEADAVIWANLLG 472
A M ++ D + W ++G
Sbjct: 406 ANSVFSTMVVK-DIISWNTMVG 426
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 171/392 (43%), Gaps = 63/392 (16%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A+S L K +H + + S E+ + ++ ++ + A ++F+K+ ++NVV
Sbjct: 262 ANSGTLSLGKAVHSL---AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW +M GY ++ + ++L QM+K + +L +C + +L G+++H +
Sbjct: 319 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI------NGYISCG 180
N +N+FV AL+++Y+ ++E A VF M ++++ W +M+ + ++C
Sbjct: 379 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMAC- 437
Query: 181 DIVSARCLFELAPER---------------DVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ C A ER D + N +V Y+ + AR LFD +P
Sbjct: 438 --ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
KD++SW M++GY + GY N E + F M
Sbjct: 496 KDLVSWTVMIAGYG--------------------------MHGYGN-----EAIATFNEM 524
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKC 343
G + P++ + +++L AC+ G L+ W Y N + + + ++D+ ++
Sbjct: 525 RDAG-IEPDEVSFISILYACSHSGLLE-QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582
Query: 344 GIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
G + A ++ D W ++ G ++
Sbjct: 583 GNLSKAYKFIETLPIAPDATIWGALLCGCRIY 614
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 286/534 (53%), Gaps = 17/534 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I Q + G + + I+ + ++ ARK+FD++ +++ + WN M +GY +NE
Sbjct: 141 IHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 81 HRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + +F + +LD T +L + ++ LR G ++H L K G ++
Sbjct: 201 YVESIQVFRDLINESCTRLDTT----TLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE 194
+V T I LYS I+ A +F E ++V + +MI+GY S G+ + LF EL
Sbjct: 257 YVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 195 RDVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ +T+VS G++ + I L +S + + Y+ ++E ++
Sbjct: 317 GAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVS-TALTTVYSKLNEIESARK 375
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+E PE+++ SWN +I GY NGL + + F+ M PN TI +LSACA+LG
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QNSEFSPNPVTITCILSACAQLG 434
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL KWVH ++ ++ V ALI MYAKCG I A +F+ M K+ +TWNT+IS
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMIS 494
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +HG G AL++F EM N+G P +TF+ +L AC+H GLV+EG F SM Y
Sbjct: 495 GYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY C+VD+L RAG L A+ F++ MPI+ +W LLG+CR++K+ LA E+
Sbjct: 555 PSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEK 614
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
L EL+P N V+LSNI+ + A ++ + K PG + IE+ E
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 211/469 (44%), Gaps = 16/469 (3%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ HL Q Q+V G + ++ + L + YAR +F + +V +N +
Sbjct: 32 SISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 74 GYAQNEFHRTVVVLFTQMKK-LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G++ NE + + +F ++K D PN T+ + + R G +H + +G
Sbjct: 92 GFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCD 151
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF--- 189
+ + +G+ ++++Y +E A KVF M E++ ++W +MI+GY V + +F
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 190 --ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----YANNGD 243
E D I+ +++ + ++ K S + +L+G Y+ G
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
++ LF E ++ ++N +I GY +NG L FK ++ G +T+V+++
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKL-KSSTLVSLVP 330
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
G L +H Y+ + + + V AL +Y+K IE+A +F+ K L +
Sbjct: 331 VS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN +ISG +G A+SLF EM+N+ P+ +T IL AC +G + G + +
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG-KWVHDLV 446
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
I ++ + A+ G +AEA MP + + V W ++
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMIS 494
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 299/566 (52%), Gaps = 52/566 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
++T A+ ++ AR +FD++ +NVVSWNAM +GY +N LF DAMP
Sbjct: 104 LLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELF------DAMPA 157
Query: 99 -NCFTFPIVLKSCVKINALREGEELH-----------CLVLKNGF--------------- 131
+ ++ +++ ++ RE E+ C L +G+
Sbjct: 158 RDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGR 217
Query: 132 --RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
R + A+I Y+ ++ A ++F EM ++ V WT+++ GY+ GD+ +A +F
Sbjct: 218 MQRPDRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVF 277
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ P+RDV+ WNT++ G++ + +A +LF MP +D++SWNT+L GY GD++
Sbjct: 278 QDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVSWNTILQGYIQQGDMDSATT 337
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
F M E++ SWN +I GY + G + +T G P+ AT V+S CA L
Sbjct: 338 WFRSMLEKDETSWNTVISGYKDEGAL-----SLLSEMTRGGYRPDQATWSVVISVCASLA 392
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL + VH+ G++ + V ++LI MY+KCG+I A VF+ + +D +TWN +I+
Sbjct: 393 ALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIA 452
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
A HG A AL+LF M PD TF+ +L AC H G + EG YF+SM D+++V
Sbjct: 453 TYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGCHYFRSMQQDWNLV 512
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+ +HY CMVDLL R+G + +A +F +++P W L SC + +++L EL +
Sbjct: 513 PRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLFSSCNAHGDIQLGELVAKN 572
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV--------- 540
+ + P + + +LSNIY G W A ++ M++ G KK GCS IE+
Sbjct: 573 VLQSRPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKEQGLKKETGCSWIELKGDVVSFSS 632
Query: 541 --NEVVMLGCLSRELDRKSIVRAEAN 564
N ++ + +E+D SI+ EA+
Sbjct: 633 NDNAHPLIEQICQEVDNLSILIEEAS 658
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 45/304 (14%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ AA +VF EM ERNV W M++G G + AR +F+ P R+ + W +++GY
Sbjct: 52 VGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTGYARR 111
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW-------- 262
+ EAR LFD+MP ++V+SWN M+SGY NG V+ + LF+ MP R+ SW
Sbjct: 112 GRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYM 171
Query: 263 ------------------------NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
N L+ GYA G + + F RM RV N
Sbjct: 172 RRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWN---- 227
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+++ R G + ++ ++ E G + A++ Y + G ++ A +VF M
Sbjct: 228 -AMITGYTRAGMMQVAR--RLFDEMPG--KDTVSWTAIVRGYLQNGDVDAAWEVFQDMPD 282
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+D++ WNT++ G + R AL LF +M + D +++ IL G ++ ++
Sbjct: 283 RDVLAWNTMMGGFVVSDRLDDALRLFADMPDR----DLVSWNTILQGYIQQGDMDSATTW 338
Query: 419 FQSM 422
F+SM
Sbjct: 339 FRSM 342
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 147/307 (47%), Gaps = 18/307 (5%)
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
+V W S I + G + +AR +F+ ER+V WN +VSG + +AR +FD MP
Sbjct: 35 DVGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMP 94
Query: 225 KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKR 284
++ +SW +L+GYA G V E + LF+ MP RNV SWN ++ GY NG+ + F
Sbjct: 95 SRNSVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDA 154
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
M +D + + ++S R ++ + A + +VC NAL+ YA G
Sbjct: 155 MPAR-----DDVSWLMMVSGYMRRKRFREAREIFDRAP-SPPPTSVC--NALLSGYAGYG 206
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
+++A ++F M D ++WN +I+G G A LF EM D +++ I+
Sbjct: 207 YLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARRLFDEMPG----KDTVSWTAIVR 262
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
G V+ FQ M D ++ + M+ + RL +A+ MP + D
Sbjct: 263 GYLQNGDVDAAWEVFQDMP-DRDVLA----WNTMMGGFVVSDRLDDALRLFADMP-DRDL 316
Query: 465 VIWANLL 471
V W +L
Sbjct: 317 VSWNTIL 323
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+ +G E + +I+ ++ +T A ++FD I ++ V+WNAM YA +
Sbjct: 404 TIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEA 463
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ LF +M K P+ TF VL +C L EG
Sbjct: 464 LALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEG 498
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 78/195 (40%), Gaps = 12/195 (6%)
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ G+V N+ I + + G + A VF+ M +++ TWN ++SGLA +G A A +F
Sbjct: 32 HAGDVGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFD 91
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M + + +++ +L G V E F M + + MV R
Sbjct: 92 AMPSR----NSVSWAALLTGYARRGRVAEARDLFDRMPH-----RNVVSWNAMVSGYLRN 142
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G + A + MP D V W ++ K A +R P + N +LS
Sbjct: 143 GMVDRARELFDAMPAR-DDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCN-ALLS 200
Query: 506 NIYGDLGRWKDVARI 520
Y G KD +
Sbjct: 201 G-YAGYGYLKDAEEL 214
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 291/530 (54%), Gaps = 10/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V GL + + ++ ++ +T A+ +FDK +N VSWN M G
Sbjct: 155 RIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKG 214
Query: 80 FHRTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ LF +M+ + D N T +L +C++I+ LR +ELH +++GF+ + V
Sbjct: 215 YIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVA 274
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDV 197
+ Y+ + A +VF M+ + V W ++I G GD A L+ ++ V
Sbjct: 275 NGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLV 334
Query: 198 ILWNTIVSGYIDVRNMIEARK-------LFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
W TI S + ++ R + + D ++LS Y + G+ + L
Sbjct: 335 PDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLL 394
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ M E++ SWN +I GY+ NGL + L F++++++G P+D +V+VL AC++ A
Sbjct: 395 FDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDG-FQPSDIAVVSVLGACSQQSA 453
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L K H YA +V V + IDMYAK G I+ + VF+ + KDL +WN II+
Sbjct: 454 LRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAA 513
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+HG G ++ LF M+ G+MPDG TFIGIL C+H GLVEEGL YF M + I P
Sbjct: 514 YGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEP 573
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHY C++D+L RAGRL +A+ V MP + D+ +W++LL CR + +E+ ++ E+L
Sbjct: 574 KLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKL 633
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELEPKN N+V LSN+Y GRW DV R++ ++D G +K GCS IE+
Sbjct: 634 LELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIEL 683
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 77 QNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+NE + + +F ++ + + FTFP V+K+C GE +H +V+K G ++
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC---LFELA 192
FVG ALI +Y ++AA KVF M RN+V W S+I+G+ G S C L E+
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENG--FSKDCFDMLVEMM 124
Query: 193 PERDVILWN--------TIVSGYIDVRNMIEARKLFDQMP-KKDVISWNTMLSGYANNGD 243
+ +L + + + +DV+ I L ++ +DV N+++ Y+ G
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ E + LF++ +N SWN +IGG G FE + F+ M + + N+ T++ +L
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
AC + L K +H Y+ +G+Q + V N + YAKCG++ A VF SM+TK + +
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
WN +I G A +G AL+L+ +M +G +PD T +L A H+ + G
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYG 356
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 236/495 (47%), Gaps = 15/495 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I V+ GL ++ +I + + A K+F + +N+VSWN++ +G+++N F
Sbjct: 53 IHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGF 112
Query: 81 HRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + +M + +P+ T VL C + ++ G +H L +K G ++ V
Sbjct: 113 SKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVN 172
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDV 197
+L+++YS + A +F + + +N V W +MI G + G I A LF E+ + D+
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDI 232
Query: 198 ----ILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKR 249
+ I+ +++ + ++L + D + N ++ YA G + +R
Sbjct: 233 EVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAER 292
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M + V SWN LIGG A NG + L+ + +M G V P+ TI ++L A A L
Sbjct: 293 VFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLV-PDWFTIGSLLLASAHLK 351
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+L + K VH + +G + + +G +L+ +Y CG +A +F+ M+ K ++WN +IS
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G + +G AL LF ++ + G P I + +L AC+ + G A+ ++
Sbjct: 412 GYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKET-HCYALKALLM 470
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+ +D+ A++G + E+ + D W ++ + V+ + E + ER
Sbjct: 471 EDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFER 529
Query: 490 LTELEPKNPANFVML 504
+ ++ + P F +
Sbjct: 530 MRKV-GQMPDGFTFI 543
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 210/496 (42%), Gaps = 85/496 (17%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + K LH + G + + + + A A+ + A ++F + + V SWNA
Sbjct: 251 QLRSLKELHGYS---IRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ G AQN R + L+ QM +P+ FT +L + + +LR G+E+H VL++G
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ F+G +L+ LY +A +F M+E++ V W +MI+GY G
Sbjct: 368 LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNG---------- 417
Query: 191 LAPERDVILWNTIVS--------------GYIDVRNMIEARK-----LFDQMPKKDVISW 231
PE +IL+ +VS G ++ + K + +DV
Sbjct: 418 -LPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVA 476
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
+ + YA +G ++E + +F+ + +++ SWN +I Y +G E ++ F+RM G++
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQM 536
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P+ T + +L+ C+ G++E +
Sbjct: 537 -PDGFTFIGILTVCSH-----------------------------------AGLVEEGLK 560
Query: 352 VFNSMDT-----KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
FN M L + ++ L GR AL L HEM E PD + +L C
Sbjct: 561 YFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMP---EQPDSRVWSSLLSFC 617
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQ-IEHYGCMVDLLARAGR---LAEAVDFVKRMPIEA 462
+ G +E G + + + P+ +E+Y + +L A +GR + +K + ++
Sbjct: 618 RNFGELEIGQIVAEKL---LELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQK 674
Query: 463 DA-VIWANLLGSCRVY 477
DA W L G +
Sbjct: 675 DAGCSWIELGGKVHSF 690
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L++ ++ ++ V+ GLE +I +++ + + AR +FD + +++ VSW
Sbjct: 347 SAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSW 406
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
NAM +GY+QN ++LF ++ P+ VL +C + +ALR G+E HC LK
Sbjct: 407 NAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALK 466
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
++FV + I++Y+ I+ + VF + +++ W ++I Y GD + L
Sbjct: 467 ALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIEL 526
Query: 189 FE----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVISWNTMLSG 237
FE + D + I++ + E K F++M PK + + ++
Sbjct: 527 FERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLE--HYACVMDM 584
Query: 238 YANNGDVEECKRLFEEMPER-NVFSWNGLIGGYANNG 273
G +++ RL EMPE+ + W+ L+ N G
Sbjct: 585 LGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFG 621
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/372 (42%), Positives = 240/372 (64%), Gaps = 5/372 (1%)
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS 230
+ I GY S G + AR +F+ P RD + +N+++ GY ++ A++LF+++ ++
Sbjct: 51 AFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVT 110
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
W +M++G+ GDVE +R+FEEMPER++ SWN +I G N L E L F+ M+ EG
Sbjct: 111 WTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGF 170
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
V PN T+V+VLSAC GAL+ KWVHV+ E + + +G AL+DMYAKCG +E A+
Sbjct: 171 V-PNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELAL 229
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK-NAGEMPDGITFIGILCACTHM 409
+VF + ++ TWN +I+GLAM+G A AL +F +M+ N PD +TF+G+L AC+H
Sbjct: 230 EVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHA 289
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G V+ G +F ++ Y + +EHY CMVDLLAR+G L EA + MP++ D V+W
Sbjct: 290 GFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRA 349
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LLG CR++KNV++AE ++E+E + V+LSN+Y +GRW V ++ MR G
Sbjct: 350 LLGGCRLHKNVKMAE---NVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGI 406
Query: 530 KKLPGCSSIEVN 541
+K+PGCSS+E++
Sbjct: 407 EKIPGCSSVEMD 418
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 21/232 (9%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++F+++ ++++VSWNAM +G N + LF M + +PN T VL +C
Sbjct: 127 ARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTG 186
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
AL G+ +H V K R + F+GTAL+++Y+ A+E A +VF + RN W +M
Sbjct: 187 AGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAM 246
Query: 173 INGYISCGDIVSARCLFE-------LAPERDV---ILWNTIVSGYIDVRNMIEARKLFDQ 222
ING G A +F +AP+ +L +G++D ++ F
Sbjct: 247 INGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDA-----GKEHFYT 301
Query: 223 MPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGG 268
+P+K + + M+ A +G ++E +L EMP + +V W L+GG
Sbjct: 302 IPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
TGA + LET K +H V L +++ ++ A+ + A ++F + +N
Sbjct: 185 TGAGA--LETGKWVHVF---VEKKRLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARN 239
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALREGEE-L 122
+WNAM NG A N + + +F QM+ P+ TF VL +C + G+E
Sbjct: 240 TCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHF 299
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMING 175
+ + K G + +++L + ++ A+K+ EM + +VVVW +++ G
Sbjct: 300 YTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 300/538 (55%), Gaps = 15/538 (2%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
H ++ +S + +++ ++ +L ++ AR++FD++ +N VSW AM +GYA
Sbjct: 143 HAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG 202
Query: 79 EFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ LF M ++ N F VL + L G +LH LVLK+G + V
Sbjct: 203 KCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSV 262
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------EL 191
+L+ +Y+ + ++AA VFG ERN + W++MI GY G+ A +F
Sbjct: 263 ENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGF 322
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEEC 247
+P + I++ D+ ++ ++ M K + V + ++ YA G +
Sbjct: 323 SPTEFTFV--GILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDA 380
Query: 248 KRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
K F ++ + +V W +I G+ NG E L + RM EG V P+ T+ +VL ACA
Sbjct: 381 KDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEG-VMPSYLTVTSVLRACA 439
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L AL+ K +H G+ VG AL MY+KCG +E+++ VF M +D+I+WN+
Sbjct: 440 CLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNS 499
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
IISG + HGRG AL LF EMK G PD ITFI +LCAC+HMGLV+ G YF++M+ DY
Sbjct: 500 IISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDY 559
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
++P+++HY C+VD+L+RAG+L EA DF++ + I+ +W +LG+CR ++ ++ A
Sbjct: 560 GLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYA 619
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E+L EL ++ + +++LSNIY +W DV R++ MR G K PGCS +E+N V
Sbjct: 620 GEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQV 677
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 298/527 (56%), Gaps = 10/527 (1%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G++K + +++ + + R++FDK+ ++ VSWN M GY+Q + + LF
Sbjct: 246 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF 305
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+M P+ T +L++C + L G+ +H ++ +G+ + LI +Y+
Sbjct: 306 MEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC 364
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP---ERDVILWNTIVS 205
+ A+ +VF M ++ V W SMIN YI G A LF++ + D + + ++S
Sbjct: 365 GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 424
Query: 206 GYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+ ++ ++L + K +++ NT++ YA G++ + ++FE M R++ +
Sbjct: 425 MSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 484
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +I ++ L RM TEG V P+ AT++++L C+ L A K +H
Sbjct: 485 WNTIIASCVHSEDCNLGLRMISRMRTEG-VTPDMATMLSILPVCSLLAAKRQGKEIHGCI 543
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G + +V VGN LI+MY+KCG + N+ VF M TKD++TW +IS M+G G A+
Sbjct: 544 FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAV 603
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
F EM+ AG +PD + F+ I+ AC+H GLVEEGL+YF M DY I P+IEHY C+VDL
Sbjct: 604 RAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL 663
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
L+R+ L +A DF+ MP++ D+ IW LL +CR+ + E+AE ER+ EL P + +
Sbjct: 664 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYY 723
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEVVMLG 547
V++SNIY LG+W V I+ +++ G KK PGCS +E+ N+V + G
Sbjct: 724 VLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFG 770
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 250/536 (46%), Gaps = 85/536 (15%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT-DQNVVSWNAMF 72
TT LH++ + ++T GL S + ++I A + T + +F + NV WN++
Sbjct: 28 TTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSII 87
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N + L+++ +++ P+ +TFP V+ +C + + +H VL GF
Sbjct: 88 RALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG 147
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---------------- 176
+++++G ALI++Y ++ A KVF EM R+VV W S+I+GY
Sbjct: 148 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRF 207
Query: 177 ------------------------ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
+ GDI+ + ++ ++DVI+ N ++S Y
Sbjct: 208 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG-LIEKIGIKKDVIVNNGLLSMYCKFNG 266
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+I+ R++FD+M +D +SWNTM+ GY+ G EE +LF EM
Sbjct: 267 LIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM------------------ 308
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
++ FK P+ TI ++L AC LG L+F K+VH Y +GY+ +
Sbjct: 309 ------VNQFK---------PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 353
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
N LI+MYAKCG + + +VF+ M KD ++WN++I+ +G A+ LF MK +
Sbjct: 354 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK 413
Query: 393 MPDGITFIGILCACTHMGLVEEGLSY---FQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
PD +T++ +L T +G + G M + +IV +VD+ A+ G +
Sbjct: 414 -PDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVS----NTLVDMYAKCGEMG 468
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
+++ + M D + W ++ SC ++ L + R+ E P MLS
Sbjct: 469 DSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRM-RTEGVTPDMATMLS 522
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 224/467 (47%), Gaps = 15/467 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
I +V+ G YI +I + + ARK+F+++ ++VVSWN++ +GY N
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + ++ + + L +P+ +T VL++C + ++ EG+ +H L+ K G + ++ V
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-----ELAPE 194
L+ +Y + ++F +M R+ V W +MI GY G + LF + P
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP- 314
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRL 250
D++ +I+ + ++ + + D M D + N +++ YA G++ + +
Sbjct: 315 -DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F M ++ SWN +I Y NG F E + FK M T+ V P+ T V +LS +LG
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD--VKPDSVTYVMLLSMSTQLGD 431
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L K +H G+ N+ V N L+DMYAKCG + +++ VF +M +D+ITWNTII+
Sbjct: 432 LHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 491
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
L + M+ G PD T + IL C+ + +G +
Sbjct: 492 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG-KEIHGCIFKLGLES 550
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+ ++++ ++ G L + K M + D V W L+ +C +Y
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMY 596
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 282/509 (55%), Gaps = 9/509 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
I A QL + A K F+ IT +N+ SWN + +++N+ V+ LF +M K + +
Sbjct: 2 IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 61
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
F +K+C ++ + + H L +K + +V AL+ +Y+ ++E A+KVF
Sbjct: 62 SFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFE 121
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
E+ +N V+W MI GY++ + LF L +V G I + A K
Sbjct: 122 EVPLKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGK- 180
Query: 220 FDQMPKKDVISWNTMLSGYANN--GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+ SGY G ++ LFE + RBV W+ +I G+A NG E
Sbjct: 181 -----EGKTFHGLYFSSGYVYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALE 235
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
+ F++ML + V PN T +++ AC+ LG+L + VH Y NG + +V + I
Sbjct: 236 SISMFRQMLADS-VTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFI 294
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
DMYAKCG I A VF + K++ +W+T+I+G MHG A AL+LF+EM++ ++P+ +
Sbjct: 295 DMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSV 354
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
TF+ +L AC+H G +EEG S+F+SM+ DY I P EHY CMVDLL RAG++ EA+ F+
Sbjct: 355 TFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINN 414
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MP E A W LLG+CR+++ ELAE ++L LE +VMLSNIY D+G W+ V
Sbjct: 415 MPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMV 474
Query: 518 ARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+ ++ M + G K+ G +SIE+ E + L
Sbjct: 475 KKTRLKMCEKGLLKIVGFTSIEIKEKLYL 503
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 170/363 (46%), Gaps = 33/363 (9%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
LE Y+ P ++ +L + A K+F+++ +N V W M GY V LF+
Sbjct: 93 LEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGYLNFSEEFGVFELFS 152
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+M++ + F ++++C + A +EG+ H L +G+ +Y
Sbjct: 153 RMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYFSSGY------------VYEVRG 200
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVS 205
++ A +F + RBVVVW+++I G+ G + + +F V + + +IV
Sbjct: 201 FLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVL 260
Query: 206 GYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+ ++ + R + M + DV ++ + + YA G + R+F ++PE+NVFS
Sbjct: 261 ACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFS 320
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
W+ +I G+ +GL E L+ F M + ++ PN T V+VLSAC+ G ++ W H +
Sbjct: 321 WSTMINGFGMHGLCAEALNLFYEMRSVNQL-PNSVTFVSVLSACSHSGRIE-EGWSHFKS 378
Query: 322 EYNGY------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAMH 374
Y + C ++D+ + G I+ A+ N+M T+ + W ++ +H
Sbjct: 379 MSRDYGITPVEEHYAC----MVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIH 434
Query: 375 GRG 377
R
Sbjct: 435 RRA 437
>gi|354805213|gb|AER41630.1| CRR4 [Oryza nivara]
Length = 748
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 276/508 (54%), Gaps = 71/508 (13%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY---STGKAIEAA 154
PN FTF +L++C + R +H +++ GF +++FV AL+++Y G + AA
Sbjct: 109 PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGVGAA 168
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
+VF EM +R+VV W S++ Y+S GD A FE PER+V+ WNT+V+G+ + +M+
Sbjct: 169 RQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGDMV 228
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECK-------------------------- 248
AR +FD+MP ++ +SWN M+SGYA +GDVE +
Sbjct: 229 TARAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGD 288
Query: 249 -----RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR P++AT+V+V+S
Sbjct: 289 LDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVS 348
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA+LG++++ W+ + + V +GNALIDM+AKCG + A +F M+T+ +IT
Sbjct: 349 ACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSIFYKMETRCIIT 408
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W T+ISG A +G AL +++ M G D FI L AC H GL++EG S F M
Sbjct: 409 WTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMV 468
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
Y+I P++EHYGCMVDLL RA EL
Sbjct: 469 ERYNIQPRMEHYGCMVDLLGRA-----------------------------------ELI 493
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E +++TELEP N + V++SN GRW V + +MR+ G +K+PG SSI+V
Sbjct: 494 EYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVGSE 553
Query: 544 V--MLGCLSRELDRKSIVRAEANMIKLL 569
V L +R RK I ++ L+
Sbjct: 554 VHEFLAKDTRHKRRKEIYETVDGLMALM 581
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-- 97
+++A A++ + A ++FD + +N+VSWNAM GY N + + F Q+ L+
Sbjct: 279 MVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTF-QLMMLEGRFR 337
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ T V+ +C ++ ++ + + K+ + +G ALI++++ + A +
Sbjct: 338 PDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSI 397
Query: 158 FGEMDERNVVVWTSMINGY 176
F +M+ R ++ WT+MI+G+
Sbjct: 398 FYKMETRCIITWTTMISGF 416
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN-- 348
V PN T +L ACA LG VH G+ +V V NAL+D+Y +CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGVG 166
Query: 349 -AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
A VF+ M +D+++WN+I+ G GA+ F M + +++ ++
Sbjct: 167 AARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPER----NVVSWNTVVAGFA 222
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
MG + + F M ++ + M+ A +G + A RM + D V W
Sbjct: 223 RMGDMVTARAVFDRMPSRNAV-----SWNLMISGYATSGDVEAARSVFDRMD-QKDVVSW 276
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
++ + Y + + A E + KN ++ + Y R+ + R
Sbjct: 277 TAMVSA---YAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALR 325
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 284/529 (53%), Gaps = 72/529 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMT----YARKMFDKITDQNVVSWNAMF 72
H + I+T ++ S R+I C T YA ++F +I + N+ +NAM
Sbjct: 37 HAYMIRTHIICDVFAAS-----RLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMI 91
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
G++ ++ + Q ++ +P+ TFP ++KSC K LHC+ + G +
Sbjct: 92 RGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTK---------LHCISM--GSQ 140
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
A+ G I+ +
Sbjct: 141 AH-------------GHIIKHGF------------------------------------- 150
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
E+DV + N++V Y + A +F +M DV+SW +M+ G+ GDVE ++LF+
Sbjct: 151 -EKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFD 209
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+MPE+N+ +W+ +I GYA N F + ++ FK + ++G V N+ +V+V+S+CA LGAL+
Sbjct: 210 QMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQG-VRANETVMVSVISSCAHLGALE 268
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ H Y NG N+ +G AL+DMYA+CG I+ AV VF + +D ++W +I+GLA
Sbjct: 269 LGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLA 328
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
MHG +L F M AG P ITF +L AC+H GLVE G F+SM D+ + P++
Sbjct: 329 MHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRL 388
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCMVDLL RAG+L EA FV +MP++ +A +W LLG+CR++KN E+ E + L +
Sbjct: 389 EHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQ 448
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L P++ +V+LSNIY + W+ V ++ M+ G KK PG S IE++
Sbjct: 449 LLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELD 497
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 21/253 (8%)
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI----DMYAKCGIIENAVDVFNSMD 357
L C+ L L K +H Y +V + LI D + +I+ A +F+ +
Sbjct: 24 LETCSDLTHL---KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
+L +N +I G + A + + + G +PD +TF ++ +CT + + G S
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMG-S 139
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+ + + +V + A G A +RM D V W +++
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRM-YYVDVVSWTSMIRGFNKC 198
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
+VE A +++ E KN + + + Y + + ++ G
Sbjct: 199 GDVESARKLFDQMPE---KNLVTWSTMISGYAQNNHFDKAVELFKVLQSQG--------- 246
Query: 538 IEVNEVVMLGCLS 550
+ NE VM+ +S
Sbjct: 247 VRANETVMVSVIS 259
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 300/565 (53%), Gaps = 45/565 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITA-----CAQLKQMT-YARKMFDKITDQ 63
++ T K QI ++ +G ++ P +I + M YA M +
Sbjct: 11 KKCSTVKQAKQIHAHILINGFT---FLRPLLIHRMLLWDVTNYRTMANYAYSMLHHLHIP 67
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ SW + ++Q V L+ QM + P LKSC +I+ + G +H
Sbjct: 68 DSFSWGCVIRFFSQKCLFTEAVSLYVQMHRTSLCPTSHAVSSALKSCARIHDMLCGMSIH 127
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM---------------------D 162
V GF ++V TAL++LYS + A KVF EM D
Sbjct: 128 GQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVSWNSLLSGYVKAGNLD 187
Query: 163 E----------RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
E ++V+ W SMI+GY G++ A LF+ PER++ WN +++G+ID +
Sbjct: 188 EAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSWNAMIAGFIDCGS 247
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
++ AR+ FD MP+++ +SW TM++GY+ GDV+ ++LF++M +++ S+N +I YA N
Sbjct: 248 LVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACYAQN 307
Query: 273 GLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
E L+ F ML + V P+ T+ +V+SAC++LG L+ W+ + G +
Sbjct: 308 SKPKEALELFNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIESHMNDFGIVLDDH 367
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+ ALID+YAKCG I+ A ++F+++ +DL+ ++ +I G ++G+ + A+ LF +M
Sbjct: 368 LATALIDLYAKCGSIDKAYELFHNLRKRDLVAYSAMIYGCGINGKASDAIKLFEQMLAEC 427
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +T+ G+L A H GLVE+G F SM DY +VP I+HYG MVDL RAG L EA
Sbjct: 428 IGPNLVTYTGLLTAYNHAGLVEKGYQCFNSMK-DYGLVPSIDHYGIMVDLFGRAGYLDEA 486
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+ MP++ +A +W LL +CR++ NVEL E+A++ +LE +LS+IY +
Sbjct: 487 YKLILNMPMQPNAGVWGALLLACRLHNNVELGEIAVQHCIKLETDTTGYCSLLSSIYATV 546
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCS 536
+W D +++ M K GCS
Sbjct: 547 EKWDDAKKLRKGMEG---KDFTGCS 568
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 291/537 (54%), Gaps = 20/537 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ G + ++T A+ + ARK+FD + + +SWNAM G+ +N
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENH 277
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M + + PN T V + ++ + +E+H +K GF ++
Sbjct: 278 ECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCN 337
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIVSARCLFELAP 193
+LI++Y++ + A K+F M+ ++ + WT+MI+GY G ++ + L ++P
Sbjct: 338 SLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSP 397
Query: 194 ERDVILWNTIVS---GYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEE 246
+ I G +DV KL + K I + N +L YA + +++
Sbjct: 398 DDVTIASALAACACLGRLDV-----GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+F+ M E++V SW+ +I G+ N FE L F+ ML G V PN T + LSACA
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML--GHVKPNSVTFIAALSACA 510
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
GAL K +H Y G V NAL+D+Y KCG A F+ KD+++WN
Sbjct: 511 ATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNI 570
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
++SG HG G ALSLF++M GE PD +TF+ +LCAC+ G+V +G F M +
Sbjct: 571 MLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKF 630
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
SIVP ++HY CMVDLL+R G+L EA + + RMPI+ DA +W LL CR++++VEL ELA
Sbjct: 631 SIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELA 690
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ + ELEP + A V+L ++Y D G+W VAR++ MR+ G ++ GCS +EV V
Sbjct: 691 AKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGV 747
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 196/386 (50%), Gaps = 14/386 (3%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ + ++ +A ++F K+ +++V SWN M GY + F + L+ +M P+
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPD 196
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+TFP VL++C I R G E+H VL+ GF + V AL+ +Y+ I AA KVF
Sbjct: 197 VYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRNM 213
M + + W +MI G+ + + LF E+ P I T+ SG +
Sbjct: 257 GMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF 316
Query: 214 IEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
A+++ K+ DV N+++ Y + G + + ++F M ++ SW +I GY
Sbjct: 317 --AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
NG + L+ + M V P+D TI + L+ACA LG LD +H A+ G+
Sbjct: 375 EKNGFPDKALEVYALMELH-NVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V NAL++MYAK I+ A++VF M KD+++W+++I+G + R AL F M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493
Query: 390 AGEMPDGITFIGILCACTHMGLVEEG 415
+ P+ +TFI L AC G + G
Sbjct: 494 HVK-PNSVTFIAALSACAATGALRSG 518
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 178/386 (46%), Gaps = 47/386 (12%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERN----VVVWTSMINGYISCGDIVSARCLFELAPER 195
AL L +A++A + D + + + +M++ + G+I A +F PER
Sbjct: 101 ALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPER 160
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISW-------------------- 231
DV WN +V GY V + EA L+ +M + DV ++
Sbjct: 161 DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVH 220
Query: 232 ---------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
N +++ YA GD+ +++F+ M + SWN +I G+ N
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECE 280
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
L+ F ML E V PN TI +V A L + F+K +H +A G+ +V N+L
Sbjct: 281 AGLELFLTML-ENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSL 339
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
I MY G + +A +F+ M+TKD ++W +ISG +G AL ++ M+ PD
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDD 399
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
+T L AC +G ++ G+ +A + + + ++++ A++ + +A++ K
Sbjct: 400 VTIASALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFK 458
Query: 457 RMPIEADAVIWANLL-GSCRVYKNVE 481
M E D V W++++ G C +++ E
Sbjct: 459 FM-AEKDVVSWSSMIAGFCFNHRSFE 483
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 148/344 (43%), Gaps = 33/344 (9%)
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFD-------- 221
++ + S G + A L E +PE Y+ + + E R+ D
Sbjct: 68 SAALRALCSHGQLAQALWLLESSPE------PPDEGAYVALFRLCEWRRAVDAGMRACAR 121
Query: 222 ---QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ P + N MLS G++ R+F +MPER+VFSWN ++GGY G E
Sbjct: 122 ADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEA 181
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
LD + RML G + P+ T VL C + + VH + G+ V V NAL+
Sbjct: 182 LDLYYRMLWAG-MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVT 240
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MYAKCG I A VF+ M D I+WN +I+G + L LF M P+ +T
Sbjct: 241 MYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMT 300
Query: 399 FIGILCAC---THMGLVEE--GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
+ A + +G +E G + + A+D + ++ + GR+ +A
Sbjct: 301 ITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFC------NSLIQMYTSLGRMGDAGK 354
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
RM + DA+ W ++ Y+ + ALE +E N
Sbjct: 355 IFSRMETK-DAMSWTAMISG---YEKNGFPDKALEVYALMELHN 394
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 6/216 (2%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P++ V + C A+D A+ + +GNA++ M + G I +A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M +D+ +WN ++ G G AL L++ M AG PD TF +L C +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
G + + + +++ +V + A+ G + A M + D + W ++
Sbjct: 214 RMGRE-VHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV-TDCISWNAMIA 271
Query: 473 SCRVYKNVELAELALER-LTELEPKNPANFVMLSNI 507
++N E E LE LT LE + N + ++++
Sbjct: 272 GH--FENHE-CEAGLELFLTMLENEVQPNLMTITSV 304
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 291/537 (54%), Gaps = 20/537 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ G + ++T A+ + ARK+FD + + +SWNAM G+ +N
Sbjct: 218 EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENH 277
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M + + PN T V + ++ + +E+H +K GF ++
Sbjct: 278 ECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCN 337
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIVSARCLFELAP 193
+LI++Y++ + A K+F M+ ++ + WT+MI+GY G ++ + L ++P
Sbjct: 338 SLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSP 397
Query: 194 ERDVILWNTIVS---GYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEE 246
+ I G +DV KL + K I + N +L YA + +++
Sbjct: 398 DDVTIASALAACACLGRLDV-----GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+F+ M E++V SW+ +I G+ N FE L F+ ML G V PN T + LSACA
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML--GHVKPNSVTFIAALSACA 510
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
GAL K +H Y G V NAL+D+Y KCG A F+ KD+++WN
Sbjct: 511 ATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNI 570
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
++SG HG G ALSLF++M GE PD +TF+ +LCAC+ G+V +G F M +
Sbjct: 571 MLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKF 630
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
SIVP ++HY CMVDLL+R G+L EA + + RMPI+ DA +W LL CR++++VEL ELA
Sbjct: 631 SIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELA 690
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+ + ELEP + A V+L ++Y D G+W VAR++ MR+ G ++ GCS +EV V
Sbjct: 691 AKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGV 747
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 196/386 (50%), Gaps = 14/386 (3%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ + ++ +A ++F K+ +++V SWN M GY + F + L+ +M P+
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPD 196
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+TFP VL++C I R G E+H VL+ GF + V AL+ +Y+ I AA KVF
Sbjct: 197 VYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRNM 213
M + + W +MI G+ + + LF E+ P I T+ SG +
Sbjct: 257 GMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF 316
Query: 214 IEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
A+++ K+ DV N+++ Y + G + + ++F M ++ SW +I GY
Sbjct: 317 --AKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
NG + L+ + M V P+D TI + L+ACA LG LD +H A+ G+
Sbjct: 375 EKNGFPDKALEVYALMELH-NVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V NAL++MYAK I+ A++VF M KD+++W+++I+G + R AL F M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493
Query: 390 AGEMPDGITFIGILCACTHMGLVEEG 415
+ P+ +TFI L AC G + G
Sbjct: 494 HVK-PNSVTFIAALSACAATGALRSG 518
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 178/386 (46%), Gaps = 47/386 (12%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERN----VVVWTSMINGYISCGDIVSARCLFELAPER 195
AL L +A++A + D + + + +M++ + G+I A +F PER
Sbjct: 101 ALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPER 160
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISW-------------------- 231
DV WN +V GY V + EA L+ +M + DV ++
Sbjct: 161 DVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVH 220
Query: 232 ---------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
N +++ YA GD+ +++F+ M + SWN +I G+ N
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECE 280
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
L+ F ML E V PN TI +V A L + F+K +H +A G+ +V N+L
Sbjct: 281 AGLELFLTML-ENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSL 339
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
I MY G + +A +F+ M+TKD ++W +ISG +G AL ++ M+ PD
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDD 399
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
+T L AC +G ++ G+ +A + + + ++++ A++ + +A++ K
Sbjct: 400 VTIASALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFK 458
Query: 457 RMPIEADAVIWANLL-GSCRVYKNVE 481
M E D V W++++ G C +++ E
Sbjct: 459 FM-AEKDVVSWSSMIAGFCFNHRSFE 483
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 148/344 (43%), Gaps = 33/344 (9%)
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFD-------- 221
++ + S G + A L E +PE Y+ + + E R+ D
Sbjct: 68 SAALRALCSHGQLAQALWLLESSPE------PPDEGAYVALFRLCEWRRAVDAGMRACAR 121
Query: 222 ---QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ P + N MLS G++ R+F +MPER+VFSWN ++GGY G E
Sbjct: 122 ADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEA 181
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
LD + RML G + P+ T VL C + + VH + G+ V V NAL+
Sbjct: 182 LDLYYRMLWAG-MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVT 240
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MYAKCG I A VF+ M D I+WN +I+G + L LF M P+ +T
Sbjct: 241 MYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMT 300
Query: 399 FIGILCAC---THMGLVEE--GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
+ A + +G +E G + + A+D + ++ + GR+ +A
Sbjct: 301 ITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFC------NSLIQMYTSLGRMGDAGK 354
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
RM + DA+ W ++ Y+ + ALE +E N
Sbjct: 355 IFSRMETK-DAMSWTAMISG---YEKNGFPDKALEVYALMELHN 394
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 6/216 (2%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P++ V + C A+D A+ + +GNA++ M + G I +A V
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M +D+ +WN ++ G G AL L++ M AG PD TF +L C +
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
G + + + +++ +V + A+ G + A M + D + W ++
Sbjct: 214 RMGRE-VHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAV-TDCISWNAMIA 271
Query: 473 SCRVYKNVELAELALER-LTELEPKNPANFVMLSNI 507
++N E E LE LT LE + N + ++++
Sbjct: 272 G--HFENHE-CEAGLELFLTMLENEVQPNLMTITSV 304
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/549 (36%), Positives = 295/549 (53%), Gaps = 52/549 (9%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
T HS L+ K LH + T T+G + + I +IT Q++ ARK+FDKI N
Sbjct: 38 TYTHSRSLQQGKKLHALLT---TNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTN 94
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN--CFTFPIVLKSCVKINALREGEEL 122
+ W A+ A+ FH + +F++M+ L+ + F P VLK+C + GE++
Sbjct: 95 IHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQV 154
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
HCLVLK F + FV +ALI +YS CG++
Sbjct: 155 HCLVLKCSFEIDAFVSSALIVMYS-------------------------------KCGEV 183
Query: 183 VSARCLFELAPERDVILWNTIVSGYI------DVRNMIEARKLFDQMPKKDVISWNTMLS 236
AR +F+ +D++ N +VSGY + +++E KL P +V++WN ++S
Sbjct: 184 RDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNP--NVVTWNALIS 241
Query: 237 GYANNGDVEECKRLF----EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
G+A D E +F E+ E +V SW ++ G+ N E DAFK+ML G
Sbjct: 242 GFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLG-FC 300
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P ATI +L ACA + F K +H YA G + ++ V +AL+DMYAKCG I A +
Sbjct: 301 PTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTL 360
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP--DGITFIGILCACTHMG 410
F M K+ +T N++I G A HG A+ LF++M+ G +P D +TF L AC+H+G
Sbjct: 361 FYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEG-VPKLDHLTFTAALTACSHVG 419
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
+E G F+ M Y I P++EHY CMVDL RAG+L EA +K MP++ D +W L
Sbjct: 420 DIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGAL 479
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
L +CR + +VELAE+A + L+ELEP++ N ++LS++Y D G W V RIK ++ +
Sbjct: 480 LAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLR 539
Query: 531 KLPGCSSIE 539
KL G S I+
Sbjct: 540 KLQGLSWID 548
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 304/541 (56%), Gaps = 10/541 (1%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+ ++ + Q+ + V+ G + + ++ ++ + + + + A ++F+ I +++ V++NA
Sbjct: 210 EFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNA 269
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY++ F+R + LF +M+++ P FTF +L + ++++ + G+++H V+K
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCN 329
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F N+FV AL++ YS + A K+F EM E + + + ++ Y G + + LF+
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFK 389
Query: 191 ----LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNG 242
+R + T++S N+ R++ Q D IS N+++ YA G
Sbjct: 390 ELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+ E R+F ++ ++ W +I Y GL + L F M ++ + AT +++
Sbjct: 450 EFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEM-QRAKIGADAATYASIV 508
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA L +L K +H + +GY NV G+AL+DMYAKCG I++A+ +F M ++ +
Sbjct: 509 RACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSV 568
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN +IS A +G G L LF EM +G PD ++ + ILCAC+H GLVEEGL YF SM
Sbjct: 569 SWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSM 628
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y +VP+ EHY +D+L R GR EA + +MP E D ++W+++L SC ++KN EL
Sbjct: 629 TRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQEL 688
Query: 483 AELALERLTELEP-KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
A+ A +L ++ ++ A +V +SNIY G W +V ++K AMR+ G KK+P S +E+
Sbjct: 689 AKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIK 748
Query: 542 E 542
Sbjct: 749 H 749
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 213/455 (46%), Gaps = 19/455 (4%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
K+ + T +I + ++ AR +FD + + V+W + GYAQN R LF +
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE 188
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + P+ + +L + +++ E ++H V+K G+ + + V +L++ Y ++
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSG 206
+ A+++F ++ ER+ V + +++ GY G A LF E+ + I++
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
Query: 207 YIDVRNMIEARKLFDQMPKKDVISW-----NTMLSGYANNGDVEECKRLFEEMPERNVFS 261
I + ++ +++ + K + + W N +L Y+ + V E +LF EMPE + S
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFV-WNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGIS 367
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEG---RVFPNDATIVTVLSACARLGALDFSKWVH 318
+N L+ YA NG E L+ FK + G R FP T+LS A LD + +H
Sbjct: 368 YNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFP----FATLLSIAAISLNLDIGRQIH 423
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+ VGN+L+DMYAKCG A +F+ + + + W +IS G
Sbjct: 424 SQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHE 483
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
L LF EM+ A D T+ I+ AC + + G S + + + +
Sbjct: 484 DGLKLFVEMQRAKIGADAATYASIVRACASLASLTLG-KQLHSHIIGSGYISNVFSGSAL 542
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
VD+ A+ G + +A+ + MP+ ++V W L+ +
Sbjct: 543 VDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N +V ++ ++ ARKLFD+MP K++ S NTM+ GY +G++ E + LF+ M +R
Sbjct: 105 NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAV 164
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+W LIGGYA N F E F M G + P+ ++ T+LS +++ + VH +
Sbjct: 165 TWTMLIGGYAQNNQFREAFGLFIEMGRHG-IDPDHVSLATLLSGFTEFDSVNEVRQVHSH 223
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
GY + V N+L+D Y K + A +FN + +D +T+N +++G + G A
Sbjct: 224 VIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREA 283
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
++LF +M+ G P TF IL A + +E G + + V + ++D
Sbjct: 284 INLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFG-QQVHGFVVKCNFVWNVFVANALLD 342
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
++ R+ EA MP E D + + N+L +C + N + E +LE EL+
Sbjct: 343 FYSKHDRVVEASKLFYEMP-EVDGISY-NVLVTCYAW-NGRVKE-SLELFKELQ 392
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 191/434 (44%), Gaps = 52/434 (11%)
Query: 106 VLKSCVK-----INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
++K C + + A + + ++K GF N + L++ + + A K+F E
Sbjct: 67 IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M +N+ +MI GYI G++ AR LF+ +R + W ++ GY EA LF
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 221 DQMPKK----DVISWNTMLSGYANNGDVEE---------------------------CK- 248
+M + D +S T+LSG+ V E CK
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246
Query: 249 -------RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
+LF ++PER+ ++N L+ GY+ G E ++ F +M G P + T +
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVG-YRPTEFTFAAI 305
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L+A +L ++F + VH + + NV V NAL+D Y+K + A +F M D
Sbjct: 306 LTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDG 365
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC-ACTHMGLVEEGLSYFQ 420
I++N +++ A +GR +L LF E++ G F +L A + L + Q
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
++ D + +I +VD+ A+ G EA + I++ +V W ++ S Y
Sbjct: 426 TIVTD--AISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQS-SVPWTAMISS---YVQK 479
Query: 481 ELAELALERLTELE 494
L E L+ E++
Sbjct: 480 GLHEDGLKLFVEMQ 493
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/529 (34%), Positives = 294/529 (55%), Gaps = 9/529 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ QVVT+G I +++ + M AR++FD + ++V ++N M GYA++
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF +M+++ PN +F +L C AL G+ +H + G +I V T
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
+LI +Y+T +IE A +VF M R+VV WT MI GY G+I A LF E
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLF 251
D I + I++ N+ AR++ Q+ D++ ++ YA G +++ +++F
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVF 418
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ MP R+V SW+ +IG Y NG E + F ++ + P+ T + +L+AC LGAL
Sbjct: 419 DAMPRRDVVSWSAMIGAYVENGYGTEAFETF-HLMKRSNIEPDGVTYINLLNACGHLGAL 477
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D ++ A +V +GNALI M AK G +E A +F++M +D+ITWN +I G
Sbjct: 478 DVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGY 537
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
++HG AL LF M P+ +TF+G+L AC+ G V+EG +F + IVP
Sbjct: 538 SLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPT 597
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++ YGCMVDLL RAG L EA +K MP++ + IW++LL +CR++ N+++AE A ER
Sbjct: 598 VKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCL 657
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
++P + A +V LS++Y G W++VA+++ M G +K GC+ IEV
Sbjct: 658 MIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEV 706
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 243/523 (46%), Gaps = 74/523 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q++ ++ G + + Y +I + +T AR++FD + ++ VV+WNA+ GYAQ
Sbjct: 78 QVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVG 137
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF QM P+ TF VL +C L G+E+H V+ GF ++ +GT
Sbjct: 138 HVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGT 197
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
AL+ +Y G +++ A +VF + R+V + M+ GY GD A LF L P
Sbjct: 198 ALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKP 257
Query: 194 ER---------------------------------DVILWNTIVSGYIDVRNMIEARKLF 220
+ D+ + +++ Y ++ AR++F
Sbjct: 258 NKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVF 317
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D M +DV+SW M+ GYA NG++E+ LF M E
Sbjct: 318 DNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE------------------------ 353
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
EG + P+ T + +++ACA L+ ++ +H + G+ ++ V AL+ MY
Sbjct: 354 -------EG-IQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMY 405
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
AKCG I++A VF++M +D+++W+ +I +G G A FH MK + PDG+T+I
Sbjct: 406 AKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYI 465
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC H+G ++ G+ + + A+ +V + ++ + A+ G + E ++ +
Sbjct: 466 NLLNACGHLGALDVGMEIY-TQAIKADLVSHVPLGNALIIMNAKHGSV-ERARYIFDTMV 523
Query: 461 EADAVIWANLLGSCRVYKNVELAELALER-LTELEPKNPANFV 502
D + W ++G ++ N A +R L E N FV
Sbjct: 524 RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFV 566
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 203/430 (47%), Gaps = 32/430 (7%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ + + C ++ G+++ +++ G + NI+ LI+LYS + A ++F +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEAR 217
+ + VV W ++I GY G + A LF + E +I + +++ + +
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178
Query: 218 KLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
++ Q+ +S ++S Y G +++ +++F+ + R+V ++N ++GGYA +G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
+ + + F RM G + PN + +++L C AL + K VH G ++ V
Sbjct: 239 DWEKAFELFYRMQQVG-LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVA 297
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LI MY CG IE A VF++M +D+++W +I G A +G A LF M+ G
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL---------AR 444
PD IT++ I+ AC + L++ + I Q++ G DLL A+
Sbjct: 358 PDRITYMHIMNACA----ISANLNHAR------EIHSQVDIAGFGTDLLVSTALVHMYAK 407
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSC--RVYKNVELAELALERLTELEPKNPANFV 502
G + +A MP D V W+ ++G+ Y L + + +EP + ++
Sbjct: 408 CGAIKDARQVFDAMP-RRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP-DGVTYI 465
Query: 503 MLSNIYGDLG 512
L N G LG
Sbjct: 466 NLLNACGHLG 475
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 45/354 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H +I +QV +G ++ ++ A+ + AR++FD + ++VVSW+AM Y
Sbjct: 378 HAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYV 437
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+N + F MK+ + P+ T+ +L +C + AL G E++ +K +++
Sbjct: 438 ENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVP 497
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
+G ALI + + ++E A +F M R+V+ W +MI GY G
Sbjct: 498 LGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHG---------------- 541
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFE 252
N EA LFD+M K+ + +++ +LS + G V+E +R F
Sbjct: 542 ---------------NAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFT 586
Query: 253 EMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ E R + L G + LD + ++ V P + ++L AC G L
Sbjct: 587 YLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNL 646
Query: 312 DFSKWVHVYAE----YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
D ++ AE + Y G V V L MYA G+ EN V M+++ +
Sbjct: 647 DVAERA---AERCLMIDPYDGAVYV--QLSHMYAAAGMWENVAKVRKVMESRGI 695
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
D +R L EG + T V + C L K V + G Q N+ N LI +
Sbjct: 43 DVLQR-LGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKL 101
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y+ CG + A +F+S++ K ++TWN +I+G A G A +LF +M + G P ITF
Sbjct: 102 YSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITF 161
Query: 400 IGILCACT 407
+ +L AC+
Sbjct: 162 LSVLDACS 169
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/569 (34%), Positives = 307/569 (53%), Gaps = 56/569 (9%)
Query: 25 VVTSGLEKSDYITPRI-ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
VVT +TP I A A + ++ +F +I + ++ +N + ++ ++
Sbjct: 2 VVTGRHHDPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHN 61
Query: 84 VVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
+ L+ +M P+ FTFP +LKSC K++ R G ++H V K+GF +N+FV AL
Sbjct: 62 ALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNAL 121
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------------ 189
+++Y A +VF E R+ V + ++ING + G + +F
Sbjct: 122 LQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDE 181
Query: 190 ----------ELAPERDV-------------------ILWNTIVSGYIDVRNM-IEARKL 219
L +R + +L N +V Y + + R +
Sbjct: 182 YTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELLVNALVDMYAKCGCLEVAERVV 241
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
+ K V +W +++S YA G+VE +RLF++M ER+V SW +I GY + G F E L
Sbjct: 242 RNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEAL 301
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ-----GNVCVGN 334
+ F + G + P++ +V LSACARLGAL+ + +H + + +Q G C
Sbjct: 302 ELFVELEDLG-MEPDEVVVVAALSACARLGALELGRRIHHKYDRDSWQCGHNRGFTC--- 357
Query: 335 ALIDMYAKCGIIENAVDVF--NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
A++DMYAKCG IE A+DVF S D K +N+I+SGLA HGRG A++LF EM+ G
Sbjct: 358 AVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAHHGRGEHAMALFEEMRLVGL 417
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
PD +T++ +LCAC H GLV+ G F+SM +Y + PQ+EHYGCMVDLL RAG L EA
Sbjct: 418 EPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAY 477
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
++ MP +A+AVIW LL +C+V +VELA LA + L +E + A +VMLSN+ +
Sbjct: 478 LLIQNMPFKANAVIWRALLSACKVDGDVELARLASQELLAMENDHGARYVMLSNMLTLMD 537
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ + A ++ A+ + G +K PG S +E+N
Sbjct: 538 KHDEAASVRRAIDNVGIQKPPGWSHVEMN 566
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 153/328 (46%), Gaps = 42/328 (12%)
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDAT 297
AN+ + LF ++P ++F +N +I ++ + L +K+ML+ +FP+ T
Sbjct: 23 ANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFT 82
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+L +CA+L VH + +G++ NV V NAL+ +Y G NA VF+
Sbjct: 83 FPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESP 142
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM-----GLV 412
+D +++NT+I+GL GR ++ +F EM+ PD TF+ +L AC+ + G V
Sbjct: 143 VRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRV 202
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGC----------MVDLLARAGRLAEAVDFVKRMPIEA 462
GL Y + GC +VD+ A+ G L A V+ ++
Sbjct: 203 VHGLVYRK--------------LGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKS 248
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
W +L+ + + VE+A +++ E ++ ++ + + Y G +++ + V
Sbjct: 249 GVAAWTSLVSAYALRGEVEVARRLFDQMGE---RDVVSWTAMISGYCHAGCFQEALELFV 305
Query: 523 AMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
+ D G +E +EVV++ LS
Sbjct: 306 ELEDLG---------MEPDEVVVVAALS 324
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 174/405 (42%), Gaps = 51/405 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ T V SG E + ++ ++ A ++FD+ ++ VS+N + NG +
Sbjct: 101 QVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRAG 160
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN--GFRANIFV 137
+ +F +M+ P+ +TF +L +C + G +H LV + F N +
Sbjct: 161 RAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENELL 220
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERN-VVVWTSMINGYISCGDIVSARCLFELAPERD 196
AL+++Y+ +E A +V + ++ V WTS+++ Y G++ AR LF+ ERD
Sbjct: 221 VNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGERD 280
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMP-------------------------------- 224
V+ W ++SGY EA +LF ++
Sbjct: 281 VVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRIHH 340
Query: 225 KKDVISWN---------TMLSGYANNGDVEECKRLFEEMPE--RNVFSWNGLIGGYANNG 273
K D SW ++ YA G +E +F + + + F +N ++ G A++G
Sbjct: 341 KYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAHHG 400
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WVHVYAEYNGYQGNVC 331
+ F+ M G + P++ T V +L AC G +D K + + +EY G +
Sbjct: 401 RGEHAMALFEEMRLVG-LEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEY-GVNPQME 458
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
++D+ + G + A + +M K + + W ++S + G
Sbjct: 459 HYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDG 503
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 309/540 (57%), Gaps = 20/540 (3%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLK-------QMTYARKMFDKITDQNVVSWNAMFNGYA 76
+++ L K+ Y + CA + + A K+FD++ D+NVV+W M +
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
Q F R V LF M +P+ FT V+ +C ++ L G + HCLV+K+G ++
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 137 VGTALIELYS---TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG--DIVSARCLFEL 191
VG +L+++Y+ +++ A KVF M NV+ WT++I GY+ G D + E+
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241
Query: 192 APER---DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDV 244
+ + +++++ ++ ++ +++ + K + S N+++S Y+ G++
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E ++ F+ + E+N+ S+N ++ YA + E + F + G N T ++LS
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAG-TGVNAFTFASLLSG 360
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
+ +GA+ + +H +G++ N+ + NALI MY++CG IE A VFN M ++I+W
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
++I+G A HG AL FH+M AG P+ +T+I +L AC+H+GL+ EGL +F+SM +
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
++ IVP++EHY C+VDLL R+G L EA++ V MP +ADA++ LG+CRV+ N++L +
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A E + E +P +PA +++LSN++ G+W++VA I+ M++ K GCS IEV V
Sbjct: 541 HAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 209/425 (49%), Gaps = 21/425 (4%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+++VSW+A+ + YA NE + F M + PN + F V ++C + G+ +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 123 HCLVLKNG-FRANIFVGTALIELYSTGKA-IEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+LK G F +++ VG ALI+++ G +E+AYKVF M +RNVV WT MI + G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 181 ------DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVIS 230
D+ L P+R + + +VS ++ + R+ + K DV
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTL--SGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182
Query: 231 WNTMLSGYAN---NGDVEECKRLFEEMPERNVFSWNGLIGGYANN-GLFFEVLDAFKRML 286
+++ YA +G V++ +++F+ MP NV SW +I GY + G E ++ F M+
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
+G+V PN T +VL ACA L + + V+ CVGN+LI MY++CG +
Sbjct: 243 -QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
ENA F+ + K+L+++NTI++ A A LF+E++ AG + TF +L
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+ +G + +G S + + ++ + +R G + A M + + +
Sbjct: 362 SSIGAIGKG-EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVIS 419
Query: 467 WANLL 471
W +++
Sbjct: 420 WTSMI 424
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 197/424 (46%), Gaps = 68/424 (16%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTY----------------- 52
+QL ++ + +V SG + +++ACA++ ++
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180
Query: 53 ---------------------ARKMFDKITDQNVVSWNAMFNGYAQN-EFHRTVVVLFTQ 90
ARK+FD++ NV+SW A+ GY Q+ R + LF +
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + PN FTF VLK+C ++ + GE+++ LV+K + VG +LI +YS
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-------RDVILWNTI 203
+E A K F + E+N+V + +++N Y +++ FEL E + + ++
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAY---AKSLNSEEAFELFNEIEGAGTGVNAFTFASL 357
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNV 259
+SG + + + ++ ++ K S N ++S Y+ G++E ++F EM + NV
Sbjct: 358 LSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNV 417
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SW +I G+A +G L+ F +ML G V PN+ T + VLSAC+ +G + S+ +
Sbjct: 418 ISWTSMITGFAKHGFATRALETFHKMLEAG-VSPNEVTYIAVLSACSHVGLI--SEGLKH 474
Query: 320 YAEYNGYQGNV-------CVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGL 371
+ G V CV +D+ + G +E A+++ NSM K D + T +
Sbjct: 475 FKSMKVEHGIVPRMEHYACV----VDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGAC 530
Query: 372 AMHG 375
+HG
Sbjct: 531 RVHG 534
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
+R++ SW+ LI YANN FE + AF ML G +PN+ V AC+ + K
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECG-FYPNEYCFTGVFRACSNKENISLGK 62
Query: 316 WVHVYAEYNGY-QGNVCVGNALIDMYAKC-GIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ + GY + +VCVG ALIDM+ K G +E+A VF+ M ++++TW +I+
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
G A+ LF +M +G +PD T G++ AC MGL+ G F + M + +
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQ-FHCLVMKSGLDLDV- 180
Query: 434 HYGC-MVDLLARA---GRLAEAVDFVKRMPIE 461
GC +VD+ A+ G + +A RMP+
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVH 212
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/480 (36%), Positives = 280/480 (58%), Gaps = 8/480 (1%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N N Q + HR + + M++ + T+ ++K C A++EG+ +H +
Sbjct: 25 NEFANFCHQWDLHRAMRAM-DAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFC 83
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G+ +FV L+ +Y +E A +F EM ERNVV WT+MI+ Y + + + +CL
Sbjct: 84 KGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCL 143
Query: 189 ---FELAPERDVILWNTIVSGYIDVRNMIEAR-KLFDQMPKKDVISWNTMLSGYANNGDV 244
F ++ +++++ + N+ + + + DV + ++ Y+ D+
Sbjct: 144 ILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDL 203
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ +F+EMP R++ WN +IGG+A N E L+ FKRM G + AT+ +VL A
Sbjct: 204 DNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAG-FLADQATLTSVLRA 262
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
C L L+ + VHV+ + ++ + NALIDMY KCG +E+A F+ M KD+I+W
Sbjct: 263 CTGLALLELGRQVHVHVL--KFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISW 320
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+T+++GLA +G AL LF MK +G P+ IT +G+L AC+H GLVE+G YF+SM
Sbjct: 321 STMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKK 380
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ + P EHYGC++DLL RAGRL EAV + M E D+V W LLG+CRV++NV+LA
Sbjct: 381 LFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAI 440
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A +++ ELEP++ +++LSNIY + RW+DVA ++ M + G +K PGCS IEV++ +
Sbjct: 441 YAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQI 500
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 83/398 (20%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ + G E ++ ++ + + A +FD++ ++NVVSW M + Y+ N+
Sbjct: 76 RVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NK 134
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + M + PN FT+ VL++C + LR +LHC ++K G +++FV +
Sbjct: 135 LNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRS 191
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--------- 190
ALI++YS ++ A VF EM R++VVW S+I G+ D A LF+
Sbjct: 192 ALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLA 251
Query: 191 ----------------------------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
L ++D+IL N ++ Y ++ +A F +
Sbjct: 252 DQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSR 311
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
M +KDVISW+TM++G A NG + LFE M E
Sbjct: 312 MVEKDVISWSTMVAGLAQNGYSRQALELFESMKESG------------------------ 347
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALI 337
PN T++ VL AC+ G ++ F ++ G + C LI
Sbjct: 348 --------SRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGC----LI 395
Query: 338 DMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
D+ + G ++ AV + + M+ + D +TW T++ +H
Sbjct: 396 DLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 22/267 (8%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+L Q+ ++ +GLE ++ +I ++ + A +FD++ +++V WN++ G+A
Sbjct: 170 NLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFA 229
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN + LF +MK+ + + T VL++C + L G ++H VLK F ++
Sbjct: 230 QNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLI 287
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
+ ALI++Y ++E A F M E++V+ W++M+ G G A LFE E
Sbjct: 288 LNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESG 347
Query: 197 V---------ILWNTIVSGYID-----VRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+L+ +G ++ R+M +KLF P ++ + ++ G
Sbjct: 348 SRPNYITVLGVLFACSHAGLVEKGWYYFRSM---KKLFGVDPGRE--HYGCLIDLLGRAG 402
Query: 243 DVEECKRLFEEMP-ERNVFSWNGLIGG 268
++E +L EM E + +W L+G
Sbjct: 403 RLDEAVKLIHEMECEPDSVTWRTLLGA 429
>gi|413925246|gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
Length = 572
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 270/508 (53%), Gaps = 40/508 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL-REGEELHCLVL 127
N + A + R F+ + + +P+ FTFP + KS K + R G ++H
Sbjct: 61 NLLIRASAASPSPRLSFAAFSSLLRSGHLPDHFTFPPLAKSASKFPSFPRTGAQVHAQAA 120
Query: 128 KNGFRANIFVGTALIELYSTGKAIEA--------------------------------AY 155
+ G A+ F +L+ +Y+ + + A
Sbjct: 121 RRGLLADAFAVNSLLAMYAALRDAASMRGVLESCAEAADVVSWNTVVAGYARCGELGNAR 180
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDVRNM 213
+ F M RN W++M+ Y + G + AR +F+ AP R V+ WN++V+G +
Sbjct: 181 RAFDGMPRRNGASWSAMVGAYAAAGQLDVARDMFDRAPAAGRSVVTWNSMVAGLARHGLL 240
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
ARK+FD+MP ++++SWN M+ GYA NGDV+ + LF+ MPE++V SW ++ GYA G
Sbjct: 241 PLARKMFDEMPARNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVVSWTCMVSGYARAG 300
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG--YQGNVC 331
+ L+ F R + G V PN+ T+V+V SACARL AL +W H + G
Sbjct: 301 RHAQALELF-RTMQSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFIGKRGMVLDDGFN 359
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+G ALIDMYAKCG + A VF S+D K++ WN +I+GLA +G + +F +MK +
Sbjct: 360 LGAALIDMYAKCGRPDVAAKVFRSLDRKNVSAWNALIAGLAANGDARRCIDVFEQMKVSD 419
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
E PD +TF+ +L AC GLV+EG F+SM+ + + P+++HYGCMVDLL RAG + EA
Sbjct: 420 EKPDSVTFVSVLAACARAGLVDEGRRCFRSMSSGFGVQPELKHYGCMVDLLGRAGLVDEA 479
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA--NFVMLSNIYG 509
+ V+ MP+ D + A LLG+CRV + ++AE R+ L K P+ ++ M+S++
Sbjct: 480 EELVRGMPMAPDDKVLATLLGACRVRRRPDVAERVRRRIQSLNTKQPSRESYFMISDVRA 539
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSS 537
RW + K M KL G S
Sbjct: 540 TADRWAVALKAKGFMHKYNIMKLDGSGS 567
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 154/387 (39%), Gaps = 87/387 (22%)
Query: 25 VVTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
V+ S E +D ++ ++ A+ ++ AR+ FD + +N SW+AM YA
Sbjct: 150 VLESCAEAADVVSWNTVVAGYARCGELGNARRAFDGMPRRNGASWSAMVGAYA------- 202
Query: 84 VVVLFTQMKKLDAMPNCF-TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
+LD + F P +S V N++ G H L
Sbjct: 203 ------AAGQLDVARDMFDRAPAAGRSVVTWNSMVAGLARHGL----------------- 239
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
+ A K+F EM RN+V W +M+ GY GD+ AR LF+ PE+DV+ W
Sbjct: 240 --------LPLARKMFDEMPARNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVVSWTC 291
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVIS----------------------WNTMLSG--- 237
+VSGY +A +LF M DV W G
Sbjct: 292 MVSGYARAGRHAQALELFRTMQSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFIGKRG 351
Query: 238 ----------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
YA G + ++F + +NV +WN LI G A NG +D
Sbjct: 352 MVLDDGFNLGAALIDMYAKCGRPDVAAKVFRSLDRKNVSAWNALIAGLAANGDARRCIDV 411
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW-VHVYAEYNGYQGNVCVGNALIDMY 340
F++M P+ T V+VL+ACAR G +D + + G Q + ++D+
Sbjct: 412 FEQMKVSDEK-PDSVTFVSVLAACARAGLVDEGRRCFRSMSSGFGVQPELKHYGCMVDLL 470
Query: 341 AKCGIIENAVDVFNSM----DTKDLIT 363
+ G+++ A ++ M D K L T
Sbjct: 471 GRAGLVDEAEELVRGMPMAPDDKVLAT 497
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 38/260 (14%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD + +++VVSW M +GYA+ H + LF M+ D PN T V +C +
Sbjct: 274 ARELFDAMPEKDVVSWTCMVSGYARAGRHAQALELFRTMQSGDVRPNEVTMVSVFSACAR 333
Query: 113 INALREGEELHCLVLKNG--FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ AL+EG H + K G +G ALI++Y+ + A KVF +D +NV W
Sbjct: 334 LAALKEGRWAHAFIGKRGMVLDDGFNLGAALIDMYAKCGRPDVAAKVFRSLDRKNVSAWN 393
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS 230
++I G + GD + RC IDV E K+ D+ P D ++
Sbjct: 394 ALIAGLAANGD--ARRC--------------------IDV---FEQMKVSDEKP--DSVT 426
Query: 231 WNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+ ++L+ A G V+E +R F M + + + ++ GL E + + M
Sbjct: 427 FVSVLAACARAGLVDEGRRCFRSMSSGFGVQPELKHYGCMVDLLGRAGLVDEAEELVRGM 486
Query: 286 LTEGRVFPNDATIVTVLSAC 305
+ P+D + T+L AC
Sbjct: 487 P----MAPDDKVLATLLGAC 502
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 289/532 (54%), Gaps = 23/532 (4%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
V+ SG ++ Y+ I+ A+ + +ARK+FD++ D+ V WN M +GY +
Sbjct: 52 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 111
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
LF M + N T+ ++ K L+ + ++ A++
Sbjct: 112 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTAR----MYFDKMPERSVVSWNAMLS 167
Query: 144 LYSTGKAIEAAYKVFGEM-----DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
Y+ G A E ++F +M + + W ++I+ S GD + + ++
Sbjct: 168 GYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGF 227
Query: 199 LWNTIV-SGYIDVR----NMIEARKLFDQM---PKKDVISWNTMLSGYANNGDVEECKRL 250
N V + +D+ N+ A K+F+Q+ + + WN M+S YA GD+ K L
Sbjct: 228 RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHL 287
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT-EGRVFPNDATIVTVLSACARLG 309
F++MP+R+ SWN +I GY NG F+ + F+ M++ E P++ T+V+V SAC LG
Sbjct: 288 FDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLG 347
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L W + N Q ++ V N+LI+MY++CG +++AV +F M T+DL+++NT+IS
Sbjct: 348 ELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLIS 407
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A HG G ++ L +MK G PD IT+I IL AC+H GL++EG F+S+
Sbjct: 408 GFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF----- 462
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY CM+D+L RAGRL EA+ ++ MP+E A I+ +LL + ++K VEL ELA +
Sbjct: 463 PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAK 522
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L ++EP N N+ +LSNIY GRWK+ +++ MR G KK G S +E N
Sbjct: 523 LFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 574
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 284/528 (53%), Gaps = 40/528 (7%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +FD + A + ++ H+ ++ + + + P+VLKSC
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCAL 90
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
A +G + HC L G ++FV TAL++ Y+ +++A F EM ++ + +
Sbjct: 91 SAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCL 150
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DV 228
I GY GD+ AR LF+ P + WN++++ Y EA LFDQM ++ +
Sbjct: 151 IIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 229 ISWNTMLSGYANNGDVE----------------------------------ECKRLFEEM 254
I+ T+ S A GD+E E +R F+ M
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRM 270
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P R+V +W+ +I GY++NG E L+ F+RM PN+ T+V VLSACA+LG+ +
Sbjct: 271 PRRDVVAWSTMIAGYSHNGRPHESLELFERM-KATNCKPNEVTLVGVLSACAQLGSDELG 329
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ + Y E +G+ALIDMY KCG + A DVF+ M+ K +I WN++I GLA++
Sbjct: 330 EQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALN 389
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS-IVPQIE 433
G A++L+ EM G P+ ITF+ +L ACTH GLV++G+++FQ M + PQ+E
Sbjct: 390 GFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVE 449
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H C+VDLL ++GRL EA F+ M +E +AVIW LL +CR + +VELA+LA +L L
Sbjct: 450 HCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVL 509
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EP + + +V+LSNIY D G W DV I+ MR +KL S IE++
Sbjct: 510 EPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELD 557
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + + QI + + + L + Y+ +I + + AR +F ++ + V++WN+
Sbjct: 322 QLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNS 381
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G A N F + L+ +M PN TF +L +C + +G + KN
Sbjct: 382 MIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNK 441
Query: 131 FRANIFVG--TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARC 187
A+ V +++L + AYK +M+ E N V+WT++++ + D+ A+
Sbjct: 442 QHASPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAK- 500
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMI-------EARKLFDQMPKKDV 228
LA + V+L S Y+ + N+ + R++ D M K++
Sbjct: 501 ---LAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNL 545
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 264/490 (53%), Gaps = 42/490 (8%)
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
A P+ TFP +LK+C ++ G+ VL+ G +++FV A S +E A
Sbjct: 121 ARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDAR 180
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI----------------- 198
++F R++V W ++I GY+ G+ A LF D +
Sbjct: 181 RLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQ 240
Query: 199 ------------------------LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
L N ++ YI ++ A+ +F+++ + V+SW TM
Sbjct: 241 MRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTM 300
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ G+A G +++ +++F+EMPER+VF WN L+ GY E L F M E V P+
Sbjct: 301 IVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEM-QEASVVPD 359
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ T+V +L+AC++LGAL+ WVH Y E + +V +G +LIDMYAKCG IE A+ +F
Sbjct: 360 EITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFK 419
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ K+ +TW +I GLA HG A+ F M G+ PD ITFIG+L AC H GLV+E
Sbjct: 420 EIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKE 479
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G +F M Y + +++HY CM+DLL RAG L EA V MP+E DAV+W + +C
Sbjct: 480 GREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFAC 539
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R+ N+ L E A +L E++P + +V+L+N+Y + K +++ MR G +K+PG
Sbjct: 540 RMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPG 599
Query: 535 CSSIEVNEVV 544
CS IE+N VV
Sbjct: 600 CSCIELNGVV 609
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 192/430 (44%), Gaps = 80/430 (18%)
Query: 25 VVTSGLEKSDYIT-PRIITACAQLKQMTY------------------------------- 52
++ SG + D++T P ++ ACA+L++ Y
Sbjct: 115 LLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRG 174
Query: 53 ----ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM--PNCFTFPIV 106
AR++FD+ +++VSWN + GY + + LF +M DA+ P+ T
Sbjct: 175 PMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAA 234
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
+ C ++ L G LH V +G + + AL+++Y ++E A VF ++ R V
Sbjct: 235 VSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTV 294
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
V WT+MI G+ G + AR +F+ PERDV WN +++GY+ + EA LF +M +
Sbjct: 295 VSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEA 354
Query: 227 DVIS----------------------W-----------------NTMLSGYANNGDVEEC 247
V+ W +++ YA G++E+
Sbjct: 355 SVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKA 414
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+F+E+PE+N +W +I G AN+G E ++ F+ M+ G+ P++ T + VLSAC
Sbjct: 415 IHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQK-PDEITFIGVLSACCH 473
Query: 308 LGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWN 365
G + + E + + + + +ID+ + G ++ A + N+M + D + W
Sbjct: 474 AGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWG 533
Query: 366 TIISGLAMHG 375
I M G
Sbjct: 534 AIFFACRMQG 543
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 33/237 (13%)
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
G +G+ L ++ +L G P+ T +L ACARL + + G
Sbjct: 97 GDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGL 156
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+V V NA + G +E+A +F+ +DL++WNT+I G G A AL LF
Sbjct: 157 DSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWR 216
Query: 387 M--KNAGEMPDGITFIGILCACTHM----------GLVE-EGLS------------YFQ- 420
M ++A PD +T I + C M G V+ +G+S Y +
Sbjct: 217 MVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKC 276
Query: 421 -SMAMDYSIVPQIEH-----YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
S+ M S+ +IEH + M+ A+ G + +A MP E D W L+
Sbjct: 277 GSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMP-ERDVFPWNALM 332
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 291/559 (52%), Gaps = 72/559 (12%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
F++ QNVVSW A +GY QN F + LF ++ + + PN TF V+++C +
Sbjct: 141 FERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDF 200
Query: 117 REGEELHCLVLKNGFRANIFVG-------------------------------TALIELY 145
G + L++K G+ ++ V TA+++LY
Sbjct: 201 GLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLY 260
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGY------------------------ISC-G 180
+ A ++F EM +RN V W++MI Y ISC
Sbjct: 261 VEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFS 320
Query: 181 DIVSARCLFE--------------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
I+SA E + E+DV + ++++ Y + R LFD + +K
Sbjct: 321 SILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK 380
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
+++SWN M+ GY+ NG +EE K LF MP RN SW+ +I G+ + F E+ + F M+
Sbjct: 381 NMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMI 440
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
G + PN +T ++L ACA +LD K +H G Q + VG AL DMYAK G I
Sbjct: 441 LLGEI-PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDI 499
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCA 405
E++ VFN M K+ ++W +I GLA G +L+LF EM+ + P+ + F+ +L A
Sbjct: 500 ESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFA 559
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C+H GLV++GL YF SM Y + P+ H+ C+VD+L+RAGRL EA +F+ MP + +
Sbjct: 560 CSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETN 619
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
WA LL C+ YKN ELAE +L E+ KN A +V+LSNIY GRW+DV +++ M+
Sbjct: 620 AWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMK 679
Query: 526 DTGFKKLPGCSSIEVNEVV 544
G KK GCS +E+ + V
Sbjct: 680 AKGLKKSGGCSWVEIRDRV 698
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 159/369 (43%), Gaps = 40/369 (10%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+LK+ +R+G LH + K G + ++ L+ +Y + A ++ + D +
Sbjct: 27 LLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFD 86
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+VV MI+ + G++ AR LF+ P+ + I W ++SG++ + E+ F++ P
Sbjct: 87 LVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPF 146
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
++V+SW +SGY NG E +LF +
Sbjct: 147 QNVVSWTAAISGYVQNGFSVEAMKLFIK-------------------------------- 174
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
L E V PN T +V+ ACA LG V GY+ ++ V N+LI + + G
Sbjct: 175 LLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGE 234
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
I A +VF+ M+ KD+++W I+ A +F EM E +++ ++
Sbjct: 235 IHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNE----VSWSAMIAR 290
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF---VKRMPIEA 462
G EE L F M + P I + ++ LA L ++ V ++ E
Sbjct: 291 YCQSGYPEESLRLFCRMIQE-GFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEK 349
Query: 463 DAVIWANLL 471
D + ++L+
Sbjct: 350 DVFVSSSLI 358
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 138/345 (40%), Gaps = 76/345 (22%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN-- 78
I V G EK +++ +I + + R +FD I ++N+VSWNAM GY+ N
Sbjct: 338 IHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGH 397
Query: 79 -----------------------------EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
E + +F +M L +PN TF +L +
Sbjct: 398 MEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCA 457
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C +L +G+ LH ++K G + + +VGTAL ++Y+ IE++ KVF M ++N V W
Sbjct: 458 CASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSW 517
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIV----------SGYID---------- 209
T+MI G G + LFE + I N ++ SG +D
Sbjct: 518 TAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSME 577
Query: 210 ---------------------VRNMIEARKLFDQMP-KKDVISWNTMLSG---YANNGDV 244
+ EA + MP + + +W +LSG Y N
Sbjct: 578 AVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELA 637
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
E EM E+N + L YA+ G + +VL K M +G
Sbjct: 638 ERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKG 682
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 228/345 (66%), Gaps = 1/345 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
DV +V Y + ++ AR++FD+M +D+ +WN++++GY+ +GD+E LF+ MP
Sbjct: 44 DVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMP 103
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
R+V SW +I GY+ NG++ + L+ F +M + V PN+ TI +V SACA+LGAL+ +
Sbjct: 104 SRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGE 163
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMH 374
+ YA NG N+ V N L++MYA+CG I+ A VFN + ++L +WN+++ GLA+H
Sbjct: 164 RIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVH 223
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
GR AL L+ +M G PD +TF+G++ ACTH GLV +G FQSM ++SIVP++EH
Sbjct: 224 GRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEH 283
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCMVDLL RAG L EA D VK MP++ D+VIW LLG+C + NVE AE+A E L ++E
Sbjct: 284 YGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVE 343
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
P NP N+V+L NIY RW VA+++ M+ K G S IE
Sbjct: 344 PWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAAGYSVIE 388
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 54/325 (16%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
PN TF + +C +L G+ +H +K+GF +++ TAL+++Y+ + A +V
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
F EM R++ W S+I GY GD+ A LF+L P R V+ W T++SGY +A
Sbjct: 68 FDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKAL 127
Query: 218 KLFDQMPK----------------------------------------KDVISWNTMLSG 237
++F +M K K++ NT+L
Sbjct: 128 EMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEM 187
Query: 238 YANNGDVEECKRLFEEM-PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA G ++ + +F E+ RN+ SWN ++ G A +G E L + +ML EG + P+D
Sbjct: 188 YARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEG-IEPDDV 246
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL------IDMYAKCGIIENAV 350
T V ++ AC G L W + + N + L +D+ + G ++ A
Sbjct: 247 TFVGLILACTH-GGLVAKGW----QLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAY 301
Query: 351 DVFNSMDTK-DLITWNTIISGLAMH 374
D+ SM K D + W T++ + H
Sbjct: 302 DLVKSMPMKPDSVIWGTLLGACSFH 326
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--------------- 61
H I T + SG + Y ++ A+L + AR++FD++T
Sbjct: 28 HGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGYS 87
Query: 62 ----------------DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK-LDAMPNCFTFP 104
++VVSW M +GY+QN + + +F +M+K + PN T
Sbjct: 88 RSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTIA 147
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE- 163
V +C K+ AL GE + NG N++V L+E+Y+ I+AA VF E+ +
Sbjct: 148 SVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKR 207
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKL 219
RN+ W SM+ G G A L++ E D + + ++ + + +L
Sbjct: 208 RNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQL 267
Query: 220 FDQM-------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGG--Y 269
F M PK + + M+ G+++E L + MP + + W L+G +
Sbjct: 268 FQSMETNFSIVPKLE--HYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSF 325
Query: 270 ANNGLFFEV 278
+N F E+
Sbjct: 326 HSNVEFAEI 334
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQN 78
+I++ +GL K+ Y++ ++ A+ ++ AR +F++I +N+ SWN+M G A +
Sbjct: 164 RIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVH 223
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFV 137
+ L+ QM P+ TF ++ +C + +G +L + N +
Sbjct: 224 GRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEH 283
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDI----VSARCLFELA 192
+++L ++ AY + M + + V+W +++ ++ ++A LF++
Sbjct: 284 YGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVE 343
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
P WN Y+ + N+ + + +D + K
Sbjct: 344 P------WNP--GNYVILCNIYASAQRWDGVAK 368
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 239/401 (59%), Gaps = 2/401 (0%)
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
+++G A + A ++F M R+VV W +M++G G + A+ +F P R+ + WN +V
Sbjct: 140 FASGDA-DGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMV 198
Query: 205 SGYIDVRNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
SG+ R+M A + F P+K D + W M+SGY + G+V + FE MP RN+ SWN
Sbjct: 199 SGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWN 258
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
++ GY N + L F+ M+ E V PN +T+ +VL C+ L AL F K +H +
Sbjct: 259 AVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMK 318
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
N+ VG +L+ MY KCG + +A +F M T+D++ WN +ISG A HG G A++L
Sbjct: 319 LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINL 378
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F MK+ G P+ ITF+ +L AC H GL + G+ F+ M Y I P+++HY CMVDLL
Sbjct: 379 FERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLC 438
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+L AVD ++ MP E + LL +CRVYKN+E AELA +L E +P++ +V
Sbjct: 439 RAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQ 498
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+NIY +W DV+R++ M+D K PG S IE+ V+
Sbjct: 499 LANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVM 539
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 65/437 (14%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYI-SCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A + F + + ++ GY + G + AR LF+ P D + +NT++S +
Sbjct: 82 LTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFA 141
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ AR+LF MP +DV+SWNTM+SG + +G VEE K +F MP RN SWN ++ G+
Sbjct: 142 SGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGF 201
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS---KWVHVYAEYNGY 326
AC+R D S +W E
Sbjct: 202 ----------------------------------ACSR----DMSAAEEWFRNAPE---- 219
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+G+ + A++ Y G + A++ F +M ++L++WN +++G + AL LF
Sbjct: 220 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 279
Query: 387 M-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M + A P+ T +L C+++ + G Q M + + +V + +
Sbjct: 280 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQ-WCMKLPLSRNLTVGTSLVSMYCKC 338
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVM 503
G L+ A M D V W ++ + + + A ER+ + +EP N++
Sbjct: 339 GDLSSACKLFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP----NWIT 393
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE--VVMLGCLSRELDRKSIVRA 561
+ A I + D G + G + E V C+ L R +
Sbjct: 394 FVAVL--------TACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 445
Query: 562 EANMIKLLPQNNHPLTF 578
++I+ +P HP +
Sbjct: 446 AVDLIRSMPFEPHPSAY 462
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 82/346 (23%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++F + ++VVSWN M +G +++ +F AMP +++ V
Sbjct: 148 ARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFL------AMP--------VRNSVS 193
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTS 171
NA+ G ++ + + AA + F E+ + V+WT+
Sbjct: 194 WNAMVSG-------------------------FACSRDMSAAEEWFRNAPEKGDAVLWTA 228
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------ 225
M++GY+ G++V A FE P R+++ WN +V+GY+ + +A +LF M +
Sbjct: 229 MVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 288
Query: 226 ---------------------KDVISW-------------NTMLSGYANNGDVEECKRLF 251
K + W +++S Y GD+ +LF
Sbjct: 289 NASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLF 348
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EM R+V +WN +I GYA +G E ++ F+RM EG V PN T V VL+AC G
Sbjct: 349 GEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEG-VEPNWITFVAVLTACIHTGLC 407
Query: 312 DFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
DF + E G + V + ++D+ + G +E AVD+ SM
Sbjct: 408 DFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 453
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF-TQMKKLDAMPNCFTFPIVLKSCVKINA 115
F+ + +N+VSWNA+ GY +N + LF T +++ + PN T VL C ++A
Sbjct: 246 FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 305
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L G+++H +K N+ VGT+L+ +Y + +A K+FGEM R+VV W +MI+G
Sbjct: 306 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 365
Query: 176 YISCGDIVSARCLFELAPERDV---------ILWNTIVSGYID--VRNMIEARKLFDQMP 224
Y GD A LFE + V +L I +G D +R ++L+ P
Sbjct: 366 YAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEP 425
Query: 225 KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
+ D ++ M+ G +E L MP
Sbjct: 426 RVD--HYSCMVDLLCRAGKLERAVDLIRSMP 454
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANN-GLFFEVLDAFKRMLTEGRVFPNDATIVT 300
GD+ + F P + ++N L+ GYA G + F R+ T P+ + T
Sbjct: 80 GDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT-----PDAVSYNT 134
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+LS G D ++ + +V N ++ +K G +E A VF +M ++
Sbjct: 135 LLSCHFASGDADGARRLFASMPVR----DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRN 190
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
++WN ++SG A + A F +NA E D + + ++ +G V + + YF+
Sbjct: 191 SVSWNAMVSGFACSRDMSAAEEWF---RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFE 247
Query: 421 SM 422
+M
Sbjct: 248 AM 249
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + L ++ + +++ + ++ A K+F ++ ++VV+WNAM +GYAQ+
Sbjct: 311 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHG 370
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+ + LF +MK PN TF VL +C+
Sbjct: 371 DGKEAINLFERMKDEGVEPNWITFVAVLTACI 402
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 290/540 (53%), Gaps = 44/540 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVS 67
+ + + + Q+ +V G ++ +A A + +A +FD+I ++
Sbjct: 16 RRCRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFM 75
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDA----MPNCFTFPIVLKSCVKINALREGEELH 123
+N + G A R V L+ +M + + P+ TFP VL++C + A G ++H
Sbjct: 76 YNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVH 135
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K G ++ FV ALI +++ SCG++
Sbjct: 136 AHVVKAGCESDAFVRNALIGMHA-------------------------------SCGELG 164
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A LF+ D + W+ +++G +++ ARKLFD+ P KD +SWN M++ YA G+
Sbjct: 165 VASALFDGRAREDAVAWSAMITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGE 224
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ + LF +PER+V SWN +I G+ G ++ F++M G+ P+ T++++LS
Sbjct: 225 MAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQK-PDVVTMLSLLS 283
Query: 304 ACARLGALDFSKWVHVYAE----YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
ACA G +D + +H G+ V +GNALIDMYAKCG +++A+ VF M K
Sbjct: 284 ACADSGDIDVGRRLHSSLSEMFLRTGF--TVILGNALIDMYAKCGSMKSALQVFWVMRDK 341
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ TWN+II GLA+HG ++ +F +M PD ITF+ +L AC+H G+V++G YF
Sbjct: 342 DVSTWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYF 401
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y I P ++HYGCMVD+L RAG L EA +F+ M +E ++VIW LLG+CRV+
Sbjct: 402 NLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGE 461
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ELAE A +L + ++V+LSNIY G W + +++ M D+G K G + ++
Sbjct: 462 IELAEHANRQLLKARNDESGDYVLLSNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVVD 521
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 272/491 (55%), Gaps = 10/491 (2%)
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ +N+VSW AM +G +QN + F M+ +P F F +++C + ++ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++HCL LK G + +FVG+ L ++YS A+ A KVF EM ++ V WT+MI+GY
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA----RKLFDQMPK----KDVISW 231
G+ A F+ + +V + ++ + ++A R + + K D+
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 232 NTMLSGYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
N + Y+ GD+E +F E RNV S+ LI GY + L F + +G
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG- 239
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ PN+ T +++ ACA AL+ +H + + V + L+DMY KCG++E A+
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
F+ + I WN+++S HG G A+ +F M + G P+ ITFI +L C+H G
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
LVEEGL YF SM Y +VP EHY C++DLL RAGRL EA +F+ RMP E +A W +
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
LG+CR++ + E+ +LA E+L +LEPKN V+LSNIY + +W+DV +++ MRD K
Sbjct: 420 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479
Query: 531 KLPGCSSIEVN 541
KLPG S ++V
Sbjct: 480 KLPGYSWVDVG 490
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 178/379 (46%), Gaps = 23/379 (6%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+E K +H + + G+ ++ + ++ M A K+F+++ ++ VSW AM
Sbjct: 57 IEMGKQMHCLALKF---GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 113
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY++ ++ F +M + + L +C + A + G +H V+K GF
Sbjct: 114 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 173
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLF- 189
++IFVG AL ++YS +E+A VFG E RNVV +T +I+GY+ I +F
Sbjct: 174 ESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 233
Query: 190 EL---APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG 242
EL E + +++++ + + + +L Q+ K +D + ++ Y G
Sbjct: 234 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCG 293
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+E+ + F+E+ + +WN L+ + +GL + + F+RM+ G V PN T +++L
Sbjct: 294 LLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRG-VKPNAITFISLL 352
Query: 303 SACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ C+ G ++ F Y G + CV ID+ + G ++ A + N M
Sbjct: 353 TGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMP 408
Query: 358 -TKDLITWNTIISGLAMHG 375
+ W + + +HG
Sbjct: 409 FEPNAFGWCSFLGACRIHG 427
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 300/571 (52%), Gaps = 59/571 (10%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
+ +G + ++ ++ ++ + ++ ARK+FD+++ +VVSWN++ YA+ + +
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 86 VLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+F++M + P+ T VL C + G++LHC + + N+FVG L+++
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILW 200
Y+ ++ A VF M ++VV W +M+ GY G A LFE E DV+ W
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 201 NTIVSGYIDVRNMIEA----RKLFDQMPKKDVISWNTMLSGYAN---------------- 240
+ +SGY EA R++ K + ++ ++LSG A+
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 241 -------NGDVEE-------------CKR------LFEEMP--ERNVFSWNGLIGGYANN 272
NG +E CK+ +F+ + ER+V +W +IGGY+ +
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 273 GLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
G + L+ M E + PN TI L ACA L AL K +H YA N Q N
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAV 511
Query: 332 ---VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
V N LIDMYAKCG I +A VF++M K+ +TW ++++G MHG G AL +F EM+
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G DG+T + +L AC+H G++++G+ YF M + + P EHY C+VDLL RAGRL
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
A+ ++ MP+E V+W L CR++ VEL E A E++TEL + ++ +LSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRWKDV RI+ MR G KK PGCS +E
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 250/520 (48%), Gaps = 62/520 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVS 67
+ +T + I ++++ G+ + +T +I+ + +++A + + +D V
Sbjct: 36 HKCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 94
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN++ Y N + LF M L P+ +TFP V K+C +I+++R GE H L L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
GF +N+FVG AL+ +YS +++ A KVF EM +VV W S+I Y G A
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 188 LFE------------------LAP----------------------ERDVILWNTIVSGY 207
+F L P +++ + N +V Y
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER----NVFSWN 263
M EA +F M KDV+SWN M++GY+ G E+ RLFE+M E +V +W+
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA-- 321
I GYA GL +E L ++ML+ G + PN+ T+++VLS CA +GAL K +H YA
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 322 -----EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK--DLITWNTIISGLAMH 374
NG+ V N LIDMYAKC ++ A +F+S+ K D++TW +I G + H
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 375 GRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQ 431
G AL L EM ++ P+ T L AC + + G + ++ + VP
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
C++D+ A+ G +++A M + + V W +L+
Sbjct: 514 FVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLM 551
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 24/325 (7%)
Query: 234 MLSGYANNGDVEECKRLFEEMPERN--VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
++S Y + G + L P + V+ WN LI Y +NG + L F M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P++ T V AC + ++ + H + G+ NV VGNAL+ MY++C + +A
Sbjct: 125 -PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA-GEMPDGITFIGILCACTHMG 410
VF+ M D+++WN+II A G+ AL +F M N G PD IT + +L C +G
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
G A+ ++ + C+VD+ A+ G + EA M ++ D V W +
Sbjct: 244 THSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAM 301
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+ E A E++ E I D+ W A A R G++
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQE------------EKIKMDVVTW-SAAISGYAQRGLGYE 348
Query: 531 KLPGC-----SSIEVNEVVMLGCLS 550
L C S I+ NEV ++ LS
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLS 373
>gi|297837203|ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
gi|297332324|gb|EFH62742.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
Length = 1243
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 288/543 (53%), Gaps = 48/543 (8%)
Query: 43 ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP---- 98
+C ++ + ARK+FD++ ++ SWN M +GYA+N ++LF +M + +A+
Sbjct: 458 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSWSAM 517
Query: 99 --------------NCFT-FPIVLKS--CVKINALREGEELHCLV--------LKNGFRA 133
+ F P+ S C + L + E L L +G
Sbjct: 518 ITGFCHNGEVNRAFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSGRED 577
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDE----------------RNVVVWTSMINGYI 177
++ LI Y +EAA +F ++ + RNVV W SMI Y+
Sbjct: 578 LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYL 637
Query: 178 SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
GD+VSAR LF+ +RD I WNT++ GY+ V M +A LF +MP +D SWN M+SG
Sbjct: 638 KVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNMMVSG 697
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA+ G++E + FE+ PE+N+ SWN +I Y N + E +D F RM +G P+ T
Sbjct: 698 YASVGNLELARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEK-PDPHT 756
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ ++LS L L +H +V V NALI MY++CG I + +F+ M
Sbjct: 757 LTSLLSVSTGLVNLRLGMQMHQIV-VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 815
Query: 358 TK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
K ++ITWN II G A HG + AL+LF MK G P ITF+ +L AC H GLV+E
Sbjct: 816 LKREVITWNAIIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVDEAK 875
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
F SM Y I PQ+EHY +V++++ G+ EA+ +K MP E D +W LL +CR+
Sbjct: 876 EQFLSMMSVYKIEPQMEHYSSLVNVISGQGQFEEAMYVIKSMPFEPDKTVWGALLDACRI 935
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
Y NV LA +A E ++ LEP++ +V+L N+Y D+G W + +++++ M KK G S
Sbjct: 936 YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 995
Query: 537 SIE 539
++
Sbjct: 996 WVD 998
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 183/388 (47%), Gaps = 74/388 (19%)
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GFRA L ++ +G EA ++F +++ RN+V W +MI+GY+ ++ AR LF
Sbjct: 383 GFRAT---NKELNQMIRSGYIAEAR-EIFEKLEARNIVTWNTMISGYVKRREMTQARKLF 438
Query: 190 ELAPERDVILWNTIVSGYID---VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+ PERDV+ WN ++SGY+ +R + EARKLFD+MP +D SWNTM+SGYA N + E
Sbjct: 439 DEMPERDVVTWNAMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRISE 498
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA-- 304
LFE+MPERN SW+ +I G+ +NG D F+RM + D++ + L A
Sbjct: 499 ALLLFEKMPERNAVSWSAMITGFCHNGEVNRAFDLFRRMPVK------DSSSLCALVAGL 552
Query: 305 ------------CARLGALDFSKWVHVYAEYN----GY---------------------- 326
+ G+LD + VYA YN GY
Sbjct: 553 IKNERLEEAAWVLGQYGSLDSGREDLVYA-YNTLIVGYGQRGQVEAARCLFDQIPDLCDD 611
Query: 327 -----------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
+ NV N++I Y K G + +A +F+ M +D I+WNT+I G
Sbjct: 612 DDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVS 671
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
R A +LF EM N D ++ ++ +G +E YF+ I +
Sbjct: 672 RMDDAFALFSEMPNR----DAHSWNMMVSGYASVGNLELARHYFEKTPEK-----NIVSW 722
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEAD 463
++ + EAVD RM I+ +
Sbjct: 723 NSIIAAYDKNKDYKEAVDVFIRMNIDGE 750
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 293/533 (54%), Gaps = 9/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++ GL+ + ++ ++ ++ A +F I +VVSWNA+ G ++
Sbjct: 204 KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHD 263
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ ++L +MK PN FT LK+C + G +LH ++K +++F
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAV 323
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
L+++YS + ++ A + + M +++++ W ++I+GY CGD + A LF D+
Sbjct: 324 GLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDF 383
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPK--------KDVISWNTMLSGYANNGDVEECKRLF 251
T +S + ++A K+ Q+ D N++L Y ++E ++F
Sbjct: 384 NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EE ++ ++ +I Y+ G E L + +M + + P+ ++L+ACA L A
Sbjct: 444 EERTWEDLVAYTSMITAYSQYGDGEEALKLYLQM-QDADIKPDPFICSSLLNACANLSAY 502
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +HV+A G+ ++ N+L++MYAKCG IE+A F+ + + +++W+ +I G
Sbjct: 503 EQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGY 562
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A HG G AL LF++M G P+ IT + +LCAC H GLV EG YF+ M + + I P
Sbjct: 563 AQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPT 622
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
EHY CM+DLL R+G+L EAV+ V +P EAD +W LLG+ R++KN+EL + A + L
Sbjct: 623 QEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLF 682
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+LEP+ V+L+NIY G W++VA+++ M+D+ KK PG S IE+ + V
Sbjct: 683 DLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKV 735
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 197/384 (51%), Gaps = 25/384 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ ++ G + + ++T ++ ++ YARK+ D+ ++ +VVSW+++ +GY QN
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F +++F +M L N FTFP VLK+C L G ++H + + GF ++ FV
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSARCLFE------ 190
L+ +Y+ ++ + ++FG + ERNVV W ++ + Y+ CG+ V LF+
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVG---LFKEMVRSG 178
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEE 246
+ P I + I++ ++ RK+ M K D S N ++ Y+ G++E
Sbjct: 179 IMPNEFSI--SIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEG 236
Query: 247 CKRLFEEMPERNVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+F+++ +V SWN +I G + N L +LD K T PN T+ + L
Sbjct: 237 AVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTR----PNMFTLSSALK 292
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA +G + + +H ++ L+DMY+KC ++++A ++SM KD+I
Sbjct: 293 ACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA 352
Query: 364 WNTIISGLAMHGRGAGALSLFHEM 387
WN +ISG + G A+SLF +M
Sbjct: 353 WNALISGYSQCGDHLDAVSLFSKM 376
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 14/270 (5%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L+ K QI T + SG+ Y+ ++ + + A K+F++ T +++V++ +
Sbjct: 397 SLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTS 456
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M Y+Q + L+ QM+ D P+ F +L +C ++A +G++LH +K G
Sbjct: 457 MITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFG 516
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
F +IF +L+ +Y+ +IE A + F E+ R +V W++MI GY G A LF
Sbjct: 517 FMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFN 576
Query: 190 ----ELAPERDVILWNTIVS-GYIDVRNMIEARKLFDQMP-----KKDVISWNTMLSGYA 239
+ P + L + + + + + N E ++ F++M K + M+
Sbjct: 577 QMLRDGVPPNHITLVSVLCACNHAGLVN--EGKQYFEKMEVMFGIKPTQEHYACMIDLLG 634
Query: 240 NNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
+G + E L +P E + F W L+G
Sbjct: 635 RSGKLNEAVELVNSIPFEADGFVWGALLGA 664
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 13/299 (4%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +++ Y+ ++L +E E +V SW+ L+ GY NG E L F M G V
Sbjct: 20 NHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLG-V 78
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N+ T +VL AC+ L+ + VH A G++ + V N L+ MYAKCG+++++
Sbjct: 79 KCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRR 138
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F + +++++WN + S A+ LF EM +G MP+ + IL AC GL
Sbjct: 139 LFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA--GL 196
Query: 412 VEEGLSY-FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
E L + + + +VD+ ++AG + AV + + D V W +
Sbjct: 197 QEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAI 255
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI-------YGDLGRWKDVARIKV 522
+ C ++ +LA + L+ + P F + S + + +LGR + IK+
Sbjct: 256 IAGCVLHDCNDLALMLLDEMKG-SGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKM 313
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H + G+ + + N L+ +Y+KC A + + D+++W++++SG +G
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACT-----HMGLVEEGLSYFQSMAMDYSIVPQ 431
AL +F+EM G + TF +L AC+ +MG G++ D +
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA-- 120
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+V + A+ G L ++ + +E + V W N L SC V
Sbjct: 121 ----NTLVVMYAKCGLLDDSRRLFGGI-VERNVVSW-NALFSCYV 159
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 298/559 (53%), Gaps = 48/559 (8%)
Query: 28 SGLEKSDYITPRIITACA--QLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFHRTV 84
SGL + + R++ CA ++ +A + + T+ N M G+ +
Sbjct: 57 SGLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHA 116
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA-NIFVGTALIE 143
+ LF ++ + + T +K+ ++ E +HC+ K GF ++ G AL+
Sbjct: 117 LTLFRRVLRDRLAVDARTIVFAVKAAATSSS--PTEAIHCVAFKRGFIGQSVLAGNALVH 174
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG----------------------- 180
+Y++ + A K+F EM +R+VV WT++I+GY G
Sbjct: 175 MYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEV 234
Query: 181 DIVSA-----------------RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
+V+A +C+ E V L N +V + + A+++FD M
Sbjct: 235 TLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGM 294
Query: 224 PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
P KDV SW +M+S YA GD+E +LF+E+P RNV SW+ ++ Y++ + E + F
Sbjct: 295 PIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFN 354
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH-VYAEYNGYQGNVCVGNALIDMYAK 342
M+ G V P DAT+V+VLSACA+L +LD W++ Y + + + NA IDM+AK
Sbjct: 355 DMIAAG-VEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAK 413
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG + A +F++M+ K++++WNT+I +HG+ AL LF E K G +PD T+IG+
Sbjct: 414 CGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGV 473
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+H GLV EG +F+ M + Y I P+ EHY CM+DLL + G L EA + + MP+ A
Sbjct: 474 LSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGA 533
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
D W LL +CR++ NVE+ + A ++L L+P + +V++S IY +W V ++
Sbjct: 534 DEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRT 593
Query: 523 AMRDTGFKKLPGCSSIEVN 541
MRD KK PGCSSIEV+
Sbjct: 594 VMRDRRVKKNPGCSSIEVD 612
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFH 81
T +V+ +E + ++ I A+ + A ++F + D+NVVSWN M + +
Sbjct: 389 DTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQP 448
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+ LF + K +P+ T+ VL +C + EG
Sbjct: 449 EEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGR 487
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 289/532 (54%), Gaps = 23/532 (4%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
V+ SG ++ Y+ I+ A+ + +ARK+FD++ D+ V WN M +GY +
Sbjct: 109 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 168
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
LF M + N T+ ++ K L+ + ++ A++
Sbjct: 169 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTAR----MYFDKMPERSVVSWNAMLS 224
Query: 144 LYSTGKAIEAAYKVFGEM-----DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
Y+ G A E ++F +M + + W ++I+ S GD + + ++
Sbjct: 225 GYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGF 284
Query: 199 LWNTIV-SGYIDVR----NMIEARKLFDQM---PKKDVISWNTMLSGYANNGDVEECKRL 250
N V + +D+ N+ A K+F+Q+ + + WN M+S YA GD+ K L
Sbjct: 285 RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHL 344
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT-EGRVFPNDATIVTVLSACARLG 309
F++MP+R+ SWN +I GY NG F+ + F+ M++ E P++ T+V+V SAC LG
Sbjct: 345 FDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLG 404
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L W + N Q ++ V N+LI+MY++CG +++AV +F M T+DL+++NT+IS
Sbjct: 405 ELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLIS 464
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A HG G ++ L +MK G PD IT+I IL AC+H GL++EG F+S+
Sbjct: 465 GFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF----- 519
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY CM+D+L RAGRL EA+ ++ MP+E A I+ +LL + ++K VEL ELA +
Sbjct: 520 PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAK 579
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L ++EP N N+ +LSNIY GRWK+ +++ MR G KK G S +E N
Sbjct: 580 LFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 631
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 195/541 (36%), Positives = 290/541 (53%), Gaps = 72/541 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIIT-ACAQLKQMTYARKMFDKITDQNVVSW 68
+ T HL Q+ V +G + T ++ A +L + YAR++FD NV +
Sbjct: 18 HRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLFDATPSPNVFLY 77
Query: 69 NAMFNGYAQ-----NEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+AM + YA E R + LF +M ++ PN F +P+VL++ I ++ +
Sbjct: 78 SAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAI-GVQLVRSI 136
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
HC K+G F G I TS+++GY G
Sbjct: 137 HCHACKDG-----FYGHDFIR--------------------------TSLLDGYSRYG-- 163
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
M +ARKLFD + ++V+SW ++SGYA G
Sbjct: 164 -----------------------------MMGDARKLFDGLTDRNVVSWTALVSGYARAG 194
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
V + LFE MP+R+V +WN +I G NGLF E + F+RM+ EG PN T+ +L
Sbjct: 195 KVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEG-FRPNGTTVSCLL 253
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SAC LG L K +H YA + V N LIDMY KCG + A +F++ + L
Sbjct: 254 SACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFSDRGLT 313
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TWN++I+ LA+HG A+++F+ M+N G PD +TF+G+L ACTH G V+EGL YF+ M
Sbjct: 314 TWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELM 373
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
++ I P+IEHYGC+VDLL RAGR +A++F+ M ++ D VIW +LL +CR+++++EL
Sbjct: 374 CDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACRIHRHLEL 433
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR-DTGFKKLPGCSSIEVN 541
AE A+ L +L P N VML+N+Y + G W++V +++ M+ D KKLPGCS IEV+
Sbjct: 434 AEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVD 493
Query: 542 E 542
Sbjct: 494 R 494
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 289/502 (57%), Gaps = 15/502 (2%)
Query: 47 LKQMTYARKMFDKITDQNVVSWNAMFNGYAQ--NEFHRTVVVLFTQMKKLDA-MPNCFTF 103
L++M +R +F +W A+ +GYA+ NE+ + LF Q+ D MPN FT+
Sbjct: 201 LQRMPPSRDLF---------AWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTY 251
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
VL++CVK+ AL G +H ++++GF + + +AL++LY A++ A V+ +
Sbjct: 252 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 311
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
+++ ++I G+IS G A+ +F E D +N ++ Y D + + R++F+ M
Sbjct: 312 PSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMM 371
Query: 224 PKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF 282
P++++++ N+M+S NG +EE ++LFE++ ERN +WN +I GY N E L F
Sbjct: 372 PRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLF 431
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
M + + +T +L ACA +G ++ K VH ++ N VG AL+DMY+K
Sbjct: 432 AVMCRLS-IECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSK 490
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG + +A F+ + + ++ +W ++I+GLA +G A+ F M P+ ITF+GI
Sbjct: 491 CGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGI 550
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L A GLV +G+ +F SM Y +VP +EHY C VDLL RA R+ EA F+ +MPI A
Sbjct: 551 LMASARAGLVNKGMRFFHSME-SYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPA 609
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
D V+W LL +C ++E+ E E+L + K+ + +V +SNIY LG+W+DV +++
Sbjct: 610 DGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRT 669
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
+R KK PGCS IEV ++V
Sbjct: 670 RLRSINAKKEPGCSWIEVKDMV 691
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 182/420 (43%), Gaps = 70/420 (16%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +FD + + +SWNA +A+ R + +M + A + T+ L +C +
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACAR 124
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
LR G ++HC V+K+G VG +L++ YS+ ++AA +F + N ++W+ M
Sbjct: 125 GRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPM 184
Query: 173 INGYISCGDIVSARCLFE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
+ + + A L + + P RD+ W I+SGY
Sbjct: 185 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYA----------------------- 221
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
G E C + E LF ++L E V
Sbjct: 222 ---------RGANEYCCKSLE---------------------LFVQLL-------AEDGV 244
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
PN+ T +VL AC ++GAL+F + +H +G++ + +AL+D+Y + G +++AV
Sbjct: 245 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVM 304
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
V+N + LIT NT+I+G GR A +F +M D ++ ++ A G
Sbjct: 305 VYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEH----DSGSYNLMIKAYADEGR 360
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+E+ F+ M + M+ +L + G+L E +++ E + V W +++
Sbjct: 361 LEDCRRMFEMMPRRNMVT-----LNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMI 415
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Query: 46 QLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
Q ++ RK+F++I D+ N V+WN+M +GY QN+ + LF M +L + TFP
Sbjct: 388 QNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFP 447
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
+L +C I + +G+ +H L+ K F +N +VGTAL+++YS + A F +
Sbjct: 448 ALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSP 507
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYID------ 209
NV WTS+ING G + A F + +V IL + +G ++
Sbjct: 508 NVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFF 567
Query: 210 ------------------------VRNMIEARKLFDQMP-KKDVISWNTMLSGYANNGDV 244
R + EA K +MP D + W +L+ D+
Sbjct: 568 HSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDL 627
Query: 245 EECKRLFEE---MPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
E +++ E+ M +++ ++ + YA G + +V+ R+
Sbjct: 628 EMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRL 671
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+E K +H + + + E + Y+ ++ ++ ++ AR F I NV SW ++
Sbjct: 459 IEQGKMVHAL---LCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSL 515
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NG AQN +V F +M K + PN TF +L + + + +G + G
Sbjct: 516 INGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGV 575
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ T ++L + + A K +M + VVW +++
Sbjct: 576 VPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTA 620
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 297/580 (51%), Gaps = 74/580 (12%)
Query: 32 KSDYITPRI-ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
+SD ++ + I+ + Q+ YA ++FD++ + VS+ M G++QNE V LF Q
Sbjct: 129 RSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQ 188
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M+ + +PN T ++ + + LH LV+K F + V T L+ +Y +
Sbjct: 189 MRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSS 248
Query: 151 IEAAYKVFGEMDERNVV-------------------------------VWTSMINGYISC 179
+ A +F EM E+N+V W ++I+GY+
Sbjct: 249 LVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRV 308
Query: 180 GDIVSA----RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------------ 223
I A R + E + ++ ++SG M E ++L +
Sbjct: 309 ERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQ 368
Query: 224 -----------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
K++V SWN +++GY N ++ LF EMPER+VF
Sbjct: 369 STIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVF 428
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SW+ +I GY N L+ F +M+ G + PN+ T+V+VLSA A G L +W H Y
Sbjct: 429 SWSTMISGYTQNEQPNLALELFHKMVASG-IKPNEVTMVSVLSAIATSGTLKEGRWAHEY 487
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK--DLITWNTIISGLAMHGRGA 378
N + + A+IDMYAKCG I NA++VF + K + WN II GLA+HG
Sbjct: 488 VHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHAN 547
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
+L +F +++ + ITFIG+L AC H+GLVE G +F SM ++SI P I+HYGCM
Sbjct: 548 LSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCM 607
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
VDLL RAGRL EA + ++ MP++AD VIW LL +CR + NV++ E A E L LEP +
Sbjct: 608 VDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHG 667
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
A+ V+LSN+Y D G+W+D ++ AM+ ++LPG S +
Sbjct: 668 ASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGV 707
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 185/437 (42%), Gaps = 113/437 (25%)
Query: 101 FTFPIVLKSCVKINA----LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
F + +VL S +K + L +G+++HCLV K+G +N F+
Sbjct: 63 FNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQN----------------- 105
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
S+IN Y CG +V +A
Sbjct: 106 --------------SLINMYGKCGLLV-------------------------------DA 120
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
+ +FD P+ D +S+N M+SGY +G ++ LF+EMP + S+ +I G++ N +
Sbjct: 121 KSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWN 180
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH------VYAEYNGYQGNV 330
+ ++ FK+M G V PN+ TI T++SA + G + + +H ++ E+ N+
Sbjct: 181 QAVELFKQMRNVG-VVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNL 239
Query: 331 ----CVGNALIDM---------------------YAKCGIIENAVDVFNSMDTKDLITWN 365
CV ++L++ Y+K G +++A VF + KDL+TW
Sbjct: 240 LRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWG 299
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG---LSYFQSM 422
TII G R AL ++ M +AG P+ + + ++ C + EG LS M
Sbjct: 300 TIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKM 359
Query: 423 AMD-YSIVPQIEHYGCMVDLLARAGRLAEA-VDFVKRMPIEADAVIWANLLGSCRVYKNV 480
D Y + ++ L A GR+ EA + F R+ + + W L+ Y
Sbjct: 360 GFDCYDFIQST-----IIHLYAACGRINEACLQF--RIGSKENVASWNALIAG---YVRN 409
Query: 481 ELAELALERLTELEPKN 497
+ + A+E E+ ++
Sbjct: 410 RMIDRAMELFNEMPERD 426
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 114/298 (38%), Gaps = 43/298 (14%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA-------- 70
Q+ + VV G + D+I II A ++ A F + +NV SWNA
Sbjct: 350 QQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRN 409
Query: 71 -----------------------MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
M +GY QNE + LF +M PN T VL
Sbjct: 410 RMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVL 469
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+ L+EG H V N + + A+I++Y+ +I A +VF E+ E+
Sbjct: 470 SAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKAST 529
Query: 168 V--WTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFD 221
V W ++I G G + +F R + I + +++ V + ++ F
Sbjct: 530 VSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFM 589
Query: 222 QMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGGYANNG 273
M + D+ + M+ G +EE + + MP + +V W L+ +G
Sbjct: 590 SMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHG 647
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 31/166 (18%)
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
F L++ T R F + +V+ L C+ L K +H +G N + N+
Sbjct: 47 FLHLNSLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNS 106
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG--------------RGA--- 378
LI+MY KCG++ +A +F+ D +++N +ISG G +G
Sbjct: 107 LINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSY 166
Query: 379 --------------GALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
A+ LF +M+N G +P+ +T ++ A +H G
Sbjct: 167 TTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFG 212
>gi|147784564|emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
Length = 1302
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 269/481 (55%), Gaps = 21/481 (4%)
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
D + WN + ++ + +MK++ + FTFP++LK+ +++ G
Sbjct: 820 DSGLQRWNRVIKRRVSQGNPDQAILAYVEMKRVGFHADNFTFPVLLKAASSLSSCCIGFA 879
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
LH +K GF + FVGTAL+++Y AI+ A KVF EM ++VVVW SM+ Y S G
Sbjct: 880 LHGQAMKTGFSGHCFVGTALLDMYXAFGAIDHATKVFEEMGVKDVVVWNSMLAAYASXGQ 939
Query: 182 IVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+ +A LF+ P +D+ +N ++SGY + AR +FD++ KD++SWN+M+ N
Sbjct: 940 MDNAMKLFDNMPLKDLASFNIMISGYAKIGRKAAARSIFDRIHAKDIVSWNSMILACTNV 999
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
GD+ + LF+ MP++N +D F M G + T+ V
Sbjct: 1000 GDMGNARNLFDVMPKKN-------------------AVDLFDEM-KAGNHEADHLTVALV 1039
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LSACA LG L +HVYA+ + + V +LIDMYAKCG I+ +++VF KD+
Sbjct: 1040 LSACAHLGWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQVKDI 1099
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
WN IISGLA+HG G A+ L +M++ G PD ITFIG+L AC+H LV+EG F
Sbjct: 1100 YCWNAIISGLALHGYGHAAVKLLDKMRDNGIRPDEITFIGLLSACSHGSLVQEGCRLFDC 1159
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M ++ + P++EHYGCMVDLL RAG L A +K MP E I LLG+C +++++E
Sbjct: 1160 MEKEFGLPPKLEHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLE 1219
Query: 482 LAELALERLT-ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
E ++ +T + + F+M N+Y G+WK+ R + M ++G K G S+IEV
Sbjct: 1220 TGEKVIBLITSKAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEV 1279
Query: 541 N 541
+
Sbjct: 1280 D 1280
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMF--------NGYAQNEF----HRTVVVL 87
+I+ A++ + AR +FD+I +++VSWN+M G A+N F + V L
Sbjct: 961 MISGYAKIGRKAAARSIFDRIHAKDIVSWNSMILACTNVGDMGNARNLFDVMPKKNAVDL 1020
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
F +MK + + T +VL +C + L +G E+H + ++ V T+LI++Y+
Sbjct: 1021 FDEMKAGNHEADHLTVALVLSACAHLGWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAK 1080
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMING 175
I+ + +VF + +++ W ++I+G
Sbjct: 1081 CGTIQRSLEVFYKSQVKDIYCWNAIISG 1108
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 298/527 (56%), Gaps = 10/527 (1%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G++K + +++ + + R++FDK+ ++ VSWN M GY+Q + + LF
Sbjct: 305 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF 364
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+M P+ T +L++C + L G+ +H ++ +G+ + LI +Y+
Sbjct: 365 MEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC 423
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP---ERDVILWNTIVS 205
+ A+ +VF M ++ V W SMIN YI G A LF++ + D + + ++S
Sbjct: 424 GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 483
Query: 206 GYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+ ++ ++L + K +++ NT++ YA G++ + ++FE M R++ +
Sbjct: 484 MSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 543
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN +I ++ L RM TEG V P+ AT++++L C+ L A K +H
Sbjct: 544 WNTIIASCVHSEDCNLGLRMISRMRTEG-VTPDMATMLSILPVCSLLAAKRQGKEIHGCI 602
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G + +V VGN LI+MY+KCG + N+ VF M TKD++TW +IS M+G G A+
Sbjct: 603 FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAV 662
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
F EM+ AG +PD + F+ I+ AC+H GLVEEGL+YF M DY I P+IEHY C+VDL
Sbjct: 663 RAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL 722
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
L+R+ L +A DF+ MP++ D+ IW LL +CR+ + E+A+ ER+ EL P + +
Sbjct: 723 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYY 782
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEVVMLG 547
V++SN+Y LG+W V I+ +++ G KK PGCS +E+ N+V + G
Sbjct: 783 VLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFG 829
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 251/536 (46%), Gaps = 85/536 (15%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT-DQNVVSWNAMF 72
TT LH++ + ++T GL S + ++I A + T + +F + NV WN++
Sbjct: 87 TTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSII 146
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
N + L+++ +++ P+ +TFP V+ +C + + +H VL GF
Sbjct: 147 RALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFG 206
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY---------------- 176
+++++G ALI++Y ++ A KVF EM R+VV W S+I+GY
Sbjct: 207 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRF 266
Query: 177 ------------------------ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
+ GDI+ + ++ ++DVI+ N ++S Y
Sbjct: 267 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG-LIEKIGIKKDVIVNNGLLSMYCKFNG 325
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+I+ R++FD+M +D +SWNTM+ GY+ G EE +LF EM
Sbjct: 326 LIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM------------------ 367
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
++ FK P+ TI ++L AC LG L+F K+VH Y +GY+ +
Sbjct: 368 ------VNQFK---------PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 412
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
N LI+MYAKCG + + +VF+ M KD ++WN++I+ +G A+ LF MK +
Sbjct: 413 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK 472
Query: 393 MPDGITFIGILCACTHMG---LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
PD +T++ +L T +G L +E M + +IV +VD+ A+ G +
Sbjct: 473 -PDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVS----NTLVDMYAKCGEMG 527
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
+++ + M D + W ++ SC ++ L + R+ E P MLS
Sbjct: 528 DSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRM-RTEGVTPDMATMLS 581
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 224/467 (47%), Gaps = 15/467 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
I +V+ G YI +I + + ARK+F+++ ++VVSWN++ +GY N
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + ++ + + L +P+ +T VL++C + ++ EG+ +H L+ K G + ++ V
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-----ELAPE 194
L+ +Y + ++F +M R+ V W +MI GY G + LF + P
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP- 373
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRL 250
D++ +I+ + ++ + + D M D + N +++ YA G++ + +
Sbjct: 374 -DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F M ++ SWN +I Y NG F E + FK M T+ V P+ T V +LS +LG
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD--VKPDSVTYVMLLSMSTQLGD 490
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L K +H G+ N+ V N L+DMYAKCG + +++ VF +M +D+ITWNTII+
Sbjct: 491 LXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 550
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
L + M+ G PD T + IL C+ + +G +
Sbjct: 551 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG-KEIHGCIFKLGLES 609
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+ ++++ ++ G L + K M + D V W L+ +C +Y
Sbjct: 610 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMY 655
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 296/540 (54%), Gaps = 19/540 (3%)
Query: 20 QIQTQVVTSG-LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ V T G L ++ Y+ ++ A M YA+ +FD+I +N WN+M GYA N
Sbjct: 43 QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ L+ +M P+ FT+P VLK+C + G ++H LV+ G +++VG
Sbjct: 103 NSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE--RD 196
+++ +Y +EAA VF M R++ W +M++G++ G+ AR FE+ + RD
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGE---ARGAFEVFGDMRRD 219
Query: 197 VILWN-----TIVSGYIDVRNMIEARKLFDQMPKK-------DVISWNTMLSGYANNGDV 244
+ + ++S DV ++ +++ + + + N+++ Y N V
Sbjct: 220 GFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESV 279
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
++LFE + ++V SWN LI GY G F+ L+ F RM+ G V P++ T+++VL+A
Sbjct: 280 SCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV-PDEVTVISVLAA 338
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
C ++ AL V Y GY NV VG ALI MYA CG + A VF+ M K+L
Sbjct: 339 CNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPAC 398
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
+++G +HGRG A+S+F+EM G PD F +L AC+H GLV+EG F M
Sbjct: 399 TVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTR 458
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
DYS+ P+ HY C+VDLL RAG L EA ++ M ++ + +W LL +CR+++NV+LA
Sbjct: 459 DYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAV 518
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++ ++L EL P + +V LSNIY RW+DV ++ + +K P S +E+N++V
Sbjct: 519 ISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMV 578
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K +H + SG + ++ II + ++ ARK+F+ + ++VVSWN++
Sbjct: 241 LKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSL 300
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY + + LF +M + A+P+ T VL +C +I+ALR G + V+K G+
Sbjct: 301 ISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGY 360
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
N+ VGTALI +Y+ ++ A +VF EM E+N+ T M+ G+ G R
Sbjct: 361 VVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGF---GIHGRGR----- 412
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEEC 247
EA +F +M K V + +LS +++G V+E
Sbjct: 413 -----------------------EAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEG 449
Query: 248 KRLFEEMP-----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
K +F +M E ++ L+ G E + M ++ PN+ +L
Sbjct: 450 KEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENM----KLKPNEDVWTALL 505
Query: 303 SAC-----ARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
SAC +L + K + + G G VC+ N
Sbjct: 506 SACRLHRNVKLAVISAQKLFELNPD--GVSGYVCLSN 540
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 190/535 (35%), Positives = 297/535 (55%), Gaps = 12/535 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V G + ++ +I ++ + AR +FD + +++ SWNAM +G QN
Sbjct: 193 KIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNG 252
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + +M+ + T +L C ++ + +H V+K+G +FV
Sbjct: 253 NAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSN 312
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---EL-APER 195
ALI +Y+ + A KVF +M R+VV W S+I Y D V+AR F +L E
Sbjct: 313 ALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP 372
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKD-----VISWNTMLSGYANNGDVEECKRL 250
D++ ++ S R+ +R + + ++ V+ N ++ YA G ++ ++
Sbjct: 373 DLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKV 432
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLG 309
F +P ++V SWN LI GY NGL E ++ + RM+ E R + N T V++L+A A +G
Sbjct: 433 FNLIPVKDVVSWNTLISGYTQNGLASEAIEVY-RMMEECREIKLNQGTWVSILAAYAHVG 491
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL +H + +V VG LID+Y KCG + +A+ +F + + + WN IIS
Sbjct: 492 ALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIIS 551
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+HG G AL LF EM++ G PD +TFI +L AC+H GLV+EG +F M +Y I
Sbjct: 552 CHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIK 610
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HYGCMVDLL RAG L A DF+K MP+ DA IW LLG+CR++ N+EL + A +R
Sbjct: 611 PSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDR 670
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L E++ +N +V+LSNIY ++G+W+ V +++ R+ G KK PG SSIEVN V
Sbjct: 671 LFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRV 725
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/582 (27%), Positives = 288/582 (49%), Gaps = 51/582 (8%)
Query: 15 TKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
K LH + +V SG +S++I+ R++ A L ++ +R FD+I ++V +WN+M +
Sbjct: 92 AKRLHAL---LVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISA 148
Query: 75 YAQNEFHRTVVVLFTQM---KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
Y +N R + F Q+ K A + +TFP VLK+C L +G ++HC V K GF
Sbjct: 149 YVRNGHFREAIDCFYQLLLVTKFQA--DFYTFPPVLKAC---QTLVDGRKIHCWVFKLGF 203
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-RCLFE 190
+ ++FV +LI +YS + A +F +M R++ W +MI+G I G+ A L E
Sbjct: 204 QWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDE 263
Query: 191 LAPE---RDVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+ E D + +I+ G I +I + + + +S N +++ YA G
Sbjct: 264 MRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVS-NALINMYAKFG 322
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
++ + +++F++M R+V SWN +I Y N F +M G + P+ T+V++
Sbjct: 323 NLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNG-LEPDLLTLVSLA 381
Query: 303 SACARLGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
S A+ S+ VH + G+ V +GNA++DMYAK G+I++A VFN + KD+
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDV 441
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP-DGITFIGILCACTHMGLVEEGLSYFQ 420
++WNT+ISG +G + A+ ++ M+ E+ + T++ IL A H+G +++G+
Sbjct: 442 VSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMR-IH 500
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
+ ++ + C++DL + GRL +A+ ++P E+ +V W ++ ++ +
Sbjct: 501 GHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRES-SVPWNAIISCHGIHGHG 559
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYG-------DLGRWKDVARIKVAMRDTGFKKLP 533
E A L L R + E P + +S + D G+W M++ G K
Sbjct: 560 EKA-LKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKW-----FFHLMQEYGIKP-- 611
Query: 534 GCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHP 575
+ GC+ L R + + IK +P HP
Sbjct: 612 --------SLKHYGCMVDLLGRAGFLEMAYDFIKDMPL--HP 643
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 278/534 (52%), Gaps = 44/534 (8%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI---TDQNVVSWNAMFNGYA 76
Q+Q Q++ GL +I + + +AR +FD +NV W A YA
Sbjct: 31 QLQAQLLVRGLPLPARAAVALIASSHSPR---HARAVFDSAVPAASENVYLWTATIAAYA 87
Query: 77 QN-----EFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
++ + LF M ++ PN FT V++ C + A+REG ++H + G
Sbjct: 88 RHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSALRAVREGIQVHGFLFSAG 147
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
VG AL+++Y S G + AR +F+
Sbjct: 148 LGRASHVGAALVDMYG-------------------------------SLGRVADARRVFD 176
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
P +V+L NT+V+ Y+ ++ R +FD+M ++D ISWNT++ GY G+ + L
Sbjct: 177 EMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDL 236
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FEEMP+RNV SWN +I + GL+ + ++ F RM R P+ AT+ ++SACA+LG+
Sbjct: 237 FEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRL-ARFQPDPATMAVLMSACAQLGS 295
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L + VH + N V N+LIDMYAKCG + A +F KD +++N +I
Sbjct: 296 LSIASQVHGILRKGCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICA 355
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LA HG G AL +F EM G PD +TF+G+L AC H GLV +G YF+SM +Y+I
Sbjct: 356 LAQHGHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQ 415
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+HY CMVDL RAG + EA + MP++ A +W L+ +CR + NVE+ ++A L
Sbjct: 416 SPDHYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAAREL 475
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+EP NP +V+L+N +W V + +MR G +K GCS +EV+ VV
Sbjct: 476 IAIEPGNPGTYVLLANTLARGQQWDFVETVWQSMRGKGIEKTAGCSWLEVDRVV 529
>gi|354805242|gb|AER41656.1| CRR4 [Oryza rufipogon]
Length = 752
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 276/512 (53%), Gaps = 75/512 (14%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-------STGKA 150
PN FTF +L++C + R +H +++ GF +++FV AL+++Y G
Sbjct: 109 PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGGGG 168
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ AA +VF EM +R+VV W S++ Y+S GD A FE PER+V+ WNT+V+G+ +
Sbjct: 169 VGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARM 228
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK---------------------- 248
+M+ AR +FD+MP ++ +SWN M+SGYA +GDVE +
Sbjct: 229 GDMVTARAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWTAMVSAYA 288
Query: 249 ---------RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR P++AT+V
Sbjct: 289 KIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLV 348
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+V+SACA+LG++++ W+ + + V +GNALIDM+AKCG + A +F M+T+
Sbjct: 349 SVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSIFYKMETR 408
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+ITW T+ISG A +G AL +++ M G D FI L AC H GL++EG S F
Sbjct: 409 CIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIF 468
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y+I P++EHYGCMVDLL RA
Sbjct: 469 NEMVERYNIQPRMEHYGCMVDLLGRA---------------------------------- 494
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
EL E +++TELEP N + V++SN GRW V + +MR+ G +K+PG SSI+
Sbjct: 495 -ELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQ 553
Query: 540 VNEVV--MLGCLSRELDRKSIVRAEANMIKLL 569
V V L +R RK I ++ L+
Sbjct: 554 VGSEVHEFLAKDTRHKRRKEIYETVDGLMALM 585
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-- 97
+++A A++ + A ++FD + +N+VSWNAM GY N + + F Q+ L+
Sbjct: 283 MVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTF-QLMMLEGRFR 341
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ T V+ +C ++ ++ + + K+ + +G ALI++++ + A +
Sbjct: 342 PDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSI 401
Query: 158 FGEMDERNVVVWTSMINGY 176
F +M+ R ++ WT+MI+G+
Sbjct: 402 FYKMETRCIITWTTMISGF 420
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 20/236 (8%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN-- 348
V PN T +L ACA LG VH G+ +V V NAL+D+Y +CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGG 166
Query: 349 -----AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
A VF+ M +D+++WN+I+ G GA+ F M + +++ ++
Sbjct: 167 GGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPER----NVVSWNTVV 222
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
MG + + F M ++ + M+ A +G + A RM + D
Sbjct: 223 AGFARMGDMVTARAVFDRMPSRNAV-----SWNLMISGYATSGDVEAARSVFDRMD-QKD 276
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
V W ++ + Y + + A E + KN ++ + Y R+ + R
Sbjct: 277 VVSWTAMVSA---YAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALR 329
>gi|255581780|ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528667|gb|EEF30682.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 434
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 248/425 (58%), Gaps = 15/425 (3%)
Query: 9 SEQLETTKHLHQIQTQVVT------SGLEKSDYITPRIITACAQLKQMTYARKMFDKITD 62
S+ + TK LH + + T S S Y P+I + Y +F+KI +
Sbjct: 18 SKTDKETKQLHALSVKTNTFSHPSISSCLLSLYAEPKI-------NNLEYVLSIFNKIQE 70
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+V +N + Y QN+ + LF+Q+ + P+ FT P V+K C +++A +EG+++
Sbjct: 71 PALVLYNILIKCYIQNQLSHDAITLFSQLLH-EFNPDGFTLPCVIKGCARLHATKEGKQI 129
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
H LVLK GF N FV ++L+ +YS K I++A KVF MD++++V W S+I+GY+ CG +
Sbjct: 130 HGLVLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKCGQV 189
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
LFE PERD+ W ++ G+ + AR+LFD+MP ++++SWN M++GY G
Sbjct: 190 ELGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAG 249
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
D LF++MPE+N+ SWN ++ GY N F E LD F ML E PN AT+V+
Sbjct: 250 DFVLASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTML-ERDFTPNHATLVSTF 308
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SA + L +L KW+H Y NG+Q + + +LI+MY+KCG IE+A+ VF + K L
Sbjct: 309 SAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQLITKKKLG 368
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
W II GL MHG AL FHEM G P ITFIG+L AC+H GLVE+G YF M
Sbjct: 369 HWTAIIVGLGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMM 428
Query: 423 AMDYS 427
A+ S
Sbjct: 429 AIRMS 433
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 293/545 (53%), Gaps = 15/545 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
Q E + QI VV GL+ Y++ +++ ++ + A +F + D+ + WNA
Sbjct: 783 QSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 842
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M Y +N+ + + LF M++ +P+ FT V+ C G+ +H + K
Sbjct: 843 MVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRP 902
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
++ + +AL+ LYS AY VF M+E+++V W S+I+G G A +F
Sbjct: 903 IQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 962
Query: 190 -------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGY 238
L P+ D++ ++++ + + ++ M K +V ++++ Y
Sbjct: 963 DMKDDDDSLKPDSDIM--TSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLY 1020
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+ G E ++F M N+ +WN +I Y+ N L ++ F ML++G +FP+ +I
Sbjct: 1021 SKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQG-IFPDSVSI 1079
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+VL A + +L K +H Y G + + NALIDMY KCG + A ++F M
Sbjct: 1080 TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 1139
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K LITWN +I G HG ALSLF E+K AGE PD +TF+ ++ AC H G VEEG ++
Sbjct: 1140 KSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNF 1199
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+ M DY I P++EHY MVDLL RAGRL EA F+K MP EAD+ IW LL + R +
Sbjct: 1200 FEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHH 1259
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
NVEL L+ E+L +EP+ + +V L N+Y + G + A++ M++ G +K PGCS I
Sbjct: 1260 NVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWI 1319
Query: 539 EVNEV 543
EV+++
Sbjct: 1320 EVSDI 1324
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 230/487 (47%), Gaps = 26/487 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK-----ITDQNVVSWNAMFNGY 75
I ++ G +I ++ + + YA ++FD ++ ++V N+M +GY
Sbjct: 583 IHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGY 642
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS-CVKINALRE-GEELHCLVLKNGFRA 133
+ + V F +M L P+ F+ IV+ C + N RE G+++H +L+N
Sbjct: 643 FKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDG 702
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ F+ TALI++Y A++VF E+ D+ NVV+W MI G+ S+ L+ LA
Sbjct: 703 DSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLA 762
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW---------NTMLSGYANNGD 243
V L +T +G + + E F + DV+ ++LS Y+ G
Sbjct: 763 KSNSVKLVSTSFTGALGACSQSE-NSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGM 821
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V E + +F + ++ + WN ++ Y N + L+ F M + V P+ T+ V+S
Sbjct: 822 VGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFM-RQKSVLPDSFTLSNVIS 880
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
C+ G D+ K VH Q + +AL+ +Y+KCG +A VF SM+ KD++
Sbjct: 881 CCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVA 940
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFIGILCACTHMGLVEEGLSYFQS 421
W ++ISGL +G+ AL +F +MK+ + PD ++ AC + + GL S
Sbjct: 941 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGS 1000
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M + V + ++DL ++ G A+ M E + V W +++ SC Y
Sbjct: 1001 M-IKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPE-NIVAWNSMI-SC--YSRNN 1055
Query: 482 LAELALE 488
L EL++E
Sbjct: 1056 LPELSIE 1062
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 224/474 (47%), Gaps = 20/474 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQN 78
QI ++ + L+ ++ +I + T A ++F +I D+ NVV WN M G+ +
Sbjct: 690 QIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGS 749
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
E + + L+ K +F L +C + G ++HC V+K G + +V
Sbjct: 750 EICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVS 809
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T+L+ +YS + A VF + ++ + +W +M+ Y+ + SA LF ++ V+
Sbjct: 810 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVL 869
Query: 199 LWNTIVSGYIDVRNMI----EARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRL 250
+ +S I +M + + ++ K+ + S + +L+ Y+ G + +
Sbjct: 870 PDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLV 929
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT-VLSACARLG 309
F+ M E+++ +W LI G NG F E L F M + D+ I+T V++ACA L
Sbjct: 930 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLE 989
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL F VH G NV VG++LID+Y+KCG+ E A+ VF SM ++++ WN++IS
Sbjct: 990 ALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMIS 1049
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ + ++ LF+ M + G PD ++ +L A + + +G S + I
Sbjct: 1050 CYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-LHGYTLRLGIP 1108
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL-------GSCRV 476
++D+ + G A + K+M + ++I NL+ G CR
Sbjct: 1109 SDTHLKNALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGYGSHGDCRT 1160
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 193/446 (43%), Gaps = 27/446 (6%)
Query: 52 YARKMFDKITDQNV--VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLK 108
+ R+ ++ D + S N+ Q + + L+T+ + + FTFP +LK
Sbjct: 510 HIRRRLSRLADSYISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLK 569
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF-----GEMDE 163
+C + L G+ +H ++ G+R + F+ T+L+ +Y ++ A +VF +
Sbjct: 570 ACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSA 629
Query: 164 RNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRNMI--EAR 217
R+V V SMI+GY R + L D + +VS N + +
Sbjct: 630 RDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGK 689
Query: 218 KLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGGYANN 272
++ M + D ++ Y G + R+F E+ ++ NV WN +I G+ +
Sbjct: 690 QIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGS 749
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVT-VLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ L+ + ML + +T T L AC++ F + +H G +
Sbjct: 750 EICESSLELY--MLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPY 807
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V +L+ MY+KCG++ A VF+ + K L WN +++ + G AL LF M+
Sbjct: 808 VSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKS 867
Query: 392 EMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
+PD T ++ C+ GL + G S + + P IE ++ L ++ G +
Sbjct: 868 VLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIE--SALLTLYSKCGCDTD 925
Query: 451 AVDFVKRMPIEADAVIWANLL-GSCR 475
A K M E D V W +L+ G C+
Sbjct: 926 AYLVFKSME-EKDMVAWGSLISGLCK 950
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 239/401 (59%), Gaps = 2/401 (0%)
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
+++G A + A ++F M R+VV W +M++G G + A+ +F P R+ + WN +V
Sbjct: 91 FASGDA-DGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMV 149
Query: 205 SGYIDVRNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
SG+ R+M A + F P+K D + W M+SGY + G+V + FE MP RN+ SWN
Sbjct: 150 SGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWN 209
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
++ GY N + L F+ M+ E V PN +T+ +VL C+ L AL F K +H +
Sbjct: 210 AVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMK 269
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
N+ VG +L+ MY KCG + +A +F M T+D++ WN +ISG A HG G A++L
Sbjct: 270 LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINL 329
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F MK+ G P+ ITF+ +L AC H GL + G+ F+ M Y I P+++HY CMVDLL
Sbjct: 330 FERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLC 389
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+L AVD ++ MP E + LL +CRVYKN+E AELA +L E +P++ +V
Sbjct: 390 RAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQ 449
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+NIY +W DV+R++ M+D K PG S IE+ V+
Sbjct: 450 LANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVM 490
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 65/437 (14%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYI-SCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A + F + + ++ GY + G + AR LF+ P D + +NT++S +
Sbjct: 33 LTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFA 92
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ AR+LF MP +DV+SWNTM+SG + +G VEE K +F MP RN SWN ++ G+
Sbjct: 93 SGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGF 152
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS---KWVHVYAEYNGY 326
AC+R D S +W E
Sbjct: 153 ----------------------------------ACSR----DMSAAEEWFRNAPE---- 170
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+G+ + A++ Y G + A++ F +M ++L++WN +++G + AL LF
Sbjct: 171 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 387 M-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M + A P+ T +L C+++ + G Q M + + +V + +
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQ-WCMKLPLSRNLTVGTSLVSMYCKC 289
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVM 503
G L+ A M D V W ++ + + + A ER+ + +EP N++
Sbjct: 290 GDLSSACKLFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP----NWIT 344
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE--VVMLGCLSRELDRKSIVRA 561
+ A I + D G + G + E V C+ L R +
Sbjct: 345 FVAVL--------TACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396
Query: 562 EANMIKLLPQNNHPLTF 578
++I+ +P HP +
Sbjct: 397 AVDLIRSMPFEPHPSAY 413
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 82/346 (23%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++F + ++VVSWN M +G +++ +F AMP +++ V
Sbjct: 99 ARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFL------AMP--------VRNSVS 144
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTS 171
NA+ G ++ + + AA + F E+ + V+WT+
Sbjct: 145 WNAMVSG-------------------------FACSRDMSAAEEWFRNAPEKGDAVLWTA 179
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------ 225
M++GY+ G++V A FE P R+++ WN +V+GY+ + +A +LF M +
Sbjct: 180 MVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 239
Query: 226 ---------------------KDVISW-------------NTMLSGYANNGDVEECKRLF 251
K + W +++S Y GD+ +LF
Sbjct: 240 NASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLF 299
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EM R+V +WN +I GYA +G E ++ F+RM EG V PN T V VL+AC G
Sbjct: 300 GEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEG-VEPNWITFVAVLTACIHTGLC 358
Query: 312 DFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
DF + E G + V + ++D+ + G +E AVD+ SM
Sbjct: 359 DFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 404
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 15/238 (6%)
Query: 31 EKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF- 88
EK D + +++ + + A + F+ + +N+VSWNA+ GY +N + LF
Sbjct: 170 EKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFR 229
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
T +++ + PN T VL C ++AL G+++H +K N+ VGT+L+ +Y
Sbjct: 230 TMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKC 289
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------IL 199
+ +A K+FGEM R+VV W +MI+GY GD A LFE + V +L
Sbjct: 290 GDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVL 349
Query: 200 WNTIVSGYID--VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
I +G D +R ++L+ P+ D ++ M+ G +E L MP
Sbjct: 350 TACIHTGLCDFGIRCFEGMQELYGIEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMP 405
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 213 MIEARKLFDQMPKKDVISWNTM-LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
MI R F + S +T+ ++ GD+ + F P + ++N L+ GYA
Sbjct: 1 MILCRCPFLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYAR 60
Query: 272 N-GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G + F R+ T P+ + T+LS G D ++ + +V
Sbjct: 61 ALGRLADARHLFDRIPT-----PDAVSYNTLLSCHFASGDADGARRLFASMPVR----DV 111
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N ++ +K G +E A VF +M ++ ++WN ++SG A + A F +NA
Sbjct: 112 VSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF---RNA 168
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
E D + + ++ +G V + + YF++M
Sbjct: 169 PEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 200
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + L ++ + +++ + ++ A K+F ++ ++VV+WNAM +GYAQ+
Sbjct: 262 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHG 321
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+ + LF +MK PN TF VL +C+
Sbjct: 322 DGKEAINLFERMKDEGVEPNWITFVAVLTACI 353
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 239/401 (59%), Gaps = 2/401 (0%)
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
+++G A + A ++F M R+VV W +M++G G + A+ +F P R+ + WN +V
Sbjct: 91 FASGDA-DGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMV 149
Query: 205 SGYIDVRNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
SG+ R+M A + F P+K D + W M+SGY + G+V + FE MP RN+ SWN
Sbjct: 150 SGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWN 209
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
++ GY N + L F+ M+ E V PN +T+ +VL C+ L AL F K +H +
Sbjct: 210 AVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMK 269
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
N+ VG +L+ MY KCG + +A +F M T+D++ WN +ISG A HG G A++L
Sbjct: 270 LPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINL 329
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F MK+ G P+ ITF+ +L AC H GL + G+ F+ M Y I P+++HY CMVDLL
Sbjct: 330 FERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLC 389
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+L AVD ++ MP E + LL +CRVYKN+E AELA +L E +P++ +V
Sbjct: 390 RAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQ 449
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+NIY +W DV+R++ M+D K PG S IE+ V+
Sbjct: 450 LANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVM 490
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 65/437 (14%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYI-SCGDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A + F + + ++ GY + G + AR LF+ P D + +NT++S +
Sbjct: 33 LTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFA 92
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ AR+LF MP +DV+SWNTM+SG + +G VEE K +F MP RN SWN ++ G+
Sbjct: 93 SGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGF 152
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS---KWVHVYAEYNGY 326
AC+R D S +W E
Sbjct: 153 ----------------------------------ACSR----DMSAAEEWFRNAPE---- 170
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+G+ + A++ Y G + A++ F +M ++L++WN +++G + AL LF
Sbjct: 171 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 387 M-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M + A P+ T +L C+++ + G Q M + + +V + +
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQ-WCMKLPLSRNLTVGTSLVSMYCKC 289
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVM 503
G L+ A M D V W ++ + + + A ER+ + +EP N++
Sbjct: 290 GDLSSACKLFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP----NWIT 344
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE--VVMLGCLSRELDRKSIVRA 561
+ A I + D G + G + E V C+ L R +
Sbjct: 345 FVAVL--------TACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396
Query: 562 EANMIKLLPQNNHPLTF 578
++I+ +P HP +
Sbjct: 397 AVDLIRSMPFEPHPSAY 413
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 82/346 (23%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++F + ++VVSWN M +G +++ +F AMP +++ V
Sbjct: 99 ARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFL------AMP--------VRNSVS 144
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTS 171
NA+ G ++ + + AA + F E+ + V+WT+
Sbjct: 145 WNAMVSG-------------------------FACSRDMSAAEEWFRNAPEKGDAVLWTA 179
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------ 225
M++GY+ G++V A FE P R+++ WN +V+GY+ + +A +LF M +
Sbjct: 180 MVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 239
Query: 226 ---------------------KDVISW-------------NTMLSGYANNGDVEECKRLF 251
K + W +++S Y GD+ +LF
Sbjct: 240 NASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLF 299
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EM R+V +WN +I GYA +G E ++ F+RM EG V PN T V VL+AC G
Sbjct: 300 GEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEG-VEPNWITFVAVLTACIHTGLC 358
Query: 312 DFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
DF + E G + V + ++D+ + G +E AVD+ SM
Sbjct: 359 DFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 404
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 15/238 (6%)
Query: 31 EKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF- 88
EK D + +++ + + A + F+ + +N+VSWNA+ GY +N + LF
Sbjct: 170 EKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFR 229
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
T +++ + PN T VL C ++AL G+++H +K N+ VGT+L+ +Y
Sbjct: 230 TMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKC 289
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------IL 199
+ +A K+FGEM R+VV W +MI+GY GD A LFE + V +L
Sbjct: 290 GDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVL 349
Query: 200 WNTIVSGYID--VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
I +G D +R ++L+ P+ D ++ M+ G +E L MP
Sbjct: 350 TACIHTGLCDFGIRCFEGMQELYGIEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMP 405
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 213 MIEARKLFDQMPKKDVISWNTM-LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
MI R F + S +T+ ++ GD+ + F P + ++N L+ GYA
Sbjct: 1 MILCRCPFLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYAR 60
Query: 272 N-GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G + F R+ T P+ + T+LS G D ++ + +V
Sbjct: 61 ALGRLADARHLFDRIPT-----PDAVSYNTLLSCHFASGDADGARRLFASMPVR----DV 111
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N ++ +K G +E A VF +M ++ ++WN ++SG A + A F +NA
Sbjct: 112 VSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF---RNA 168
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
E D + + ++ +G V + + YF++M
Sbjct: 169 PEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + L ++ + +++ + ++ A K+F ++ ++VV+WNAM +GYAQ+
Sbjct: 262 QIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHG 321
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
+ + LF +MK PN TF VL +C+
Sbjct: 322 DGKEAINLFERMKDEGVEPNWITFVAVLTACI 353
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 289/587 (49%), Gaps = 83/587 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITD--QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM 97
++ A A ++ A FD + ++ V NA+ + YA+ V +F + ++
Sbjct: 94 LVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153
Query: 98 -PNCFTFPIVLKSCVKIN--ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA- 153
P+ ++F +L + + ++R +L C VLK+G + V AL+ LY +A+EA
Sbjct: 154 RPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEAT 213
Query: 154 ---------------------------------AYKVFGEMDERNVVVWTSMINGYISCG 180
A VF E+D + VVW +MI+GY+ G
Sbjct: 214 RDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSG 273
Query: 181 DIVSARCLFE-------------------------------------------LAPERDV 197
+V A LF PE +
Sbjct: 274 MVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAAL 333
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ N +V+ Y N+ AR++FD M KDV+SWNT+LSGY + +++ +FEEMP +
Sbjct: 334 PVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK 393
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
N SW ++ GY + G + L F RM E V P D T +SAC LG+L K +
Sbjct: 394 NELSWMVMVSGYVHGGFSEDALKLFNRMRAED-VKPCDYTYAGAISACGELGSLKHGKQL 452
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H + G++G+ GNALI MYA+CG ++ A +F M D ++WN +IS L HG G
Sbjct: 453 HGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHG 512
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL LF M G PD I+F+ +L AC H GLV+EG YF+SM D+ I+P +HY
Sbjct: 513 REALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTR 572
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++DLL RAGR+ EA D +K MP E IW +L CR ++EL A ++L ++ P++
Sbjct: 573 LIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQH 632
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++LSN Y GRW D AR++ MRD G KK PGCS IE V
Sbjct: 633 DGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L + KH Q+ +V G E S+ +IT A+ + A MF + + + VSWNA
Sbjct: 442 ELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNA 501
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M + Q+ R + LF +M P+ +F VL +C + EG + + +K
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQ-YFESMKRD 560
Query: 131 FRANIFVG----TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIV-- 183
F I G T LI+L I A + M E +W ++++G + GD+
Sbjct: 561 F--GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELG 618
Query: 184 --SARCLFELAPERD---VILWNT 202
+A LF++ P+ D ++L NT
Sbjct: 619 AHAADQLFKMTPQHDGTYILLSNT 642
>gi|115471447|ref|NP_001059322.1| Os07g0260000 [Oryza sativa Japonica Group]
gi|113610858|dbj|BAF21236.1| Os07g0260000 [Oryza sativa Japonica Group]
Length = 750
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/510 (36%), Positives = 276/510 (54%), Gaps = 73/510 (14%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY-----STGKAIE 152
PN FTF +L++C + R +H +++ GF +++FV AL+++Y G +
Sbjct: 109 PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGGVG 168
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
AA +VF EM +R+VV W S++ Y+S GD A FE PER+V+ WNT+V+G+ + +
Sbjct: 169 AARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVAGFARMGD 228
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK------------------------ 248
M+ AR +FD+MP ++ +SWN M+SGYA +GDVE +
Sbjct: 229 MVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKI 288
Query: 249 -------RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR P++AT+V+V
Sbjct: 289 GDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSV 348
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+SACA+LG++++ W+ + + V +GNALIDM+AKCG + A +F M+T+ +
Sbjct: 349 VSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCI 408
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
ITW T+ISG A +G AL +++ M G D FI L AC H GL++EG S F
Sbjct: 409 ITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNE 468
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M Y+I P++EHYGCMVDLL RA E
Sbjct: 469 MVERYNIQPRMEHYGCMVDLLGRA-----------------------------------E 493
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L E +++TELEP N + V++SN GRW V + +MR+ G +K+PG SSI+V
Sbjct: 494 LIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVG 553
Query: 542 EVV--MLGCLSRELDRKSIVRAEANMIKLL 569
V L +R RK I ++ L+
Sbjct: 554 SEVHEFLAKDTRHKRRKEIYETVDGLMALM 583
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 70/372 (18%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A++ M AR +FD++ +N VSWN M +GYA + +F +M + D
Sbjct: 219 VVAGFARMGDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKD---- 274
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ TA++ Y+ ++ ++F
Sbjct: 275 -----------------------------------VVSWTAMVSAYAKIGDLDTVNELFD 299
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFEL-------APERDVILWNTIVSGYIDVRN 212
M +N+V W +MI GY A F+L P+ ++ ++VS + +
Sbjct: 300 HMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLV--SVVSACAQLGS 357
Query: 213 MIEARKLFDQMPKKD----VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ + + K + V N ++ +A GDV + +F +M R + +W +I G
Sbjct: 358 VEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISG 417
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGY 326
+A NGL + L + M EG V +D + L+ACA G L +S + + YN
Sbjct: 418 FAFNGLCRDALLVYNNMCREG-VQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYN-I 475
Query: 327 QGNVCVGNALIDMYAKCGIIE------NAVDVFNSMDTKDLITWNTIISGL-AMHGRGAG 379
Q + ++D+ + +IE ++ FNS ++ ++S A+ GR G
Sbjct: 476 QPRMEHYGCMVDLLGRAELIEYVSKKITELEPFNS-------SYQVLVSNCSALEGRWDG 528
Query: 380 ALSLFHEMKNAG 391
+ M+N G
Sbjct: 529 VIDARTSMRNWG 540
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 18/234 (7%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN-- 348
V PN T +L ACA LG VH G+ +V V NAL+D+Y +CG
Sbjct: 107 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGGGGGGG 166
Query: 349 ---AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
A VF+ M +D+++WN+I+ G GA+ F M + +++ ++
Sbjct: 167 VGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPER----NVVSWNTVVAG 222
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
MG + + F M ++ + M+ A +G + A RM + D V
Sbjct: 223 FARMGDMVTARAVFDRMPSRNAV-----SWNLMISGYAMSGDVEAARSVFDRMD-QKDVV 276
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
W ++ + Y + + E + KN ++ + Y R+ + R
Sbjct: 277 SWTAMVSA---YAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALR 327
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 289/502 (57%), Gaps = 15/502 (2%)
Query: 47 LKQMTYARKMFDKITDQNVVSWNAMFNGYAQ--NEFHRTVVVLFTQMKKLDA-MPNCFTF 103
L++M +R +F +W A+ +GYA+ NE+ + LF Q+ D MPN FT+
Sbjct: 156 LQRMPPSRDLF---------AWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTY 206
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
VL++CVK+ AL G +H ++++GF + + +AL++LY A++ A V+ +
Sbjct: 207 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 266
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
+++ ++I G+IS G A+ +F E D +N ++ Y D + + R++F+ M
Sbjct: 267 PSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMM 326
Query: 224 PKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF 282
P++++++ N+M+S NG +EE ++LFE++ ERN +WN +I GY N E L F
Sbjct: 327 PRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLF 386
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
M + + +T +L ACA +G ++ K VH ++ N VG AL+DMY+K
Sbjct: 387 AVMCRLS-IECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSK 445
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG + +A F+ + + ++ +W ++I+GLA +G A+ F M P+ ITF+GI
Sbjct: 446 CGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGI 505
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L A GLV +G+ +F SM Y +VP +EHY C VDLL RA R+ EA F+ +MPI A
Sbjct: 506 LMASARAGLVNKGMRFFHSME-SYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPA 564
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
D V+W LL +C ++E+ E E+L + K+ + +V +SNIY LG+W+DV +++
Sbjct: 565 DGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRT 624
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
+R KK PGCS IEV ++V
Sbjct: 625 RLRSINAKKEPGCSWIEVKDMV 646
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 175/407 (42%), Gaps = 70/407 (17%)
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+SWNA +A+ R + +M + A + T+ L +C + LR G ++HC
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
V+K+G VG +L++ YS+ ++AA +F + N ++W+ M+ + + A
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 186 RCLFE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
L + + P RD+ W I+SGY G
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYA--------------------------------RGAN 180
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E C + E LF ++L E V PN+ T +VL A
Sbjct: 181 EYCCKSLE---------------------LFVQLL-------AEDGVMPNEFTYDSVLRA 212
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
C ++GAL+F + +H +G++ + +AL+D+Y + G +++AV V+N + LIT
Sbjct: 213 CVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITS 272
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
NT+I+G GR A +F +M D ++ ++ A G +E+ F+ M
Sbjct: 273 NTLIAGFISMGRTEDAKLVFSQMTEH----DSGSYNLMIKAYADEGRLEDCRRMFEMMPR 328
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ M+ +L + G+L E +++ E + V W +++
Sbjct: 329 RNMVT-----LNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMI 370
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Query: 46 QLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
Q ++ RK+F++I D+ N V+WN+M +GY QN+ + LF M +L + TFP
Sbjct: 343 QNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFP 402
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
+L +C I + +G+ +H L+ K F +N +VGTAL+++YS + A F +
Sbjct: 403 ALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSP 462
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYID------ 209
NV WTS+ING G + A F + +V IL + +G ++
Sbjct: 463 NVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFF 522
Query: 210 ------------------------VRNMIEARKLFDQMP-KKDVISWNTMLSGYANNGDV 244
R + EA K +MP D + W +L+ D+
Sbjct: 523 HSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDL 582
Query: 245 EECKRLFEE---MPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
E +++ E+ M +++ ++ + YA G + +V+ R+
Sbjct: 583 EMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRL 626
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
+E K +H + + + E + Y+ ++ ++ ++ AR F I NV SW ++
Sbjct: 414 IEQGKMVHAL---LCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSL 470
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NG AQN +V F +M K + PN TF +L + + + +G + G
Sbjct: 471 INGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGV 530
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMING 175
+ T ++L + + A K +M + VVW +++
Sbjct: 531 VPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTA 575
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 289/537 (53%), Gaps = 72/537 (13%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIIT-ACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
T HL Q+ V +G + T ++ A +L + YAR++FD NV ++AM
Sbjct: 240 TLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLFDATPSPNVFLYSAML 299
Query: 73 NGYAQ-----NEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+ YA E R + LF +M ++ PN F +P+VL++ I ++ +HC
Sbjct: 300 SAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAI-GVQLVRSIHCHA 358
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
K+G F G I TS+++GY G
Sbjct: 359 CKDG-----FYGHDFIR--------------------------TSLLDGYSRYG------ 381
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
M +ARKLFD + ++V+SW ++SGYA G V +
Sbjct: 382 -------------------------MMGDARKLFDGLTDRNVVSWTALVSGYARAGKVGD 416
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LFE MP+R+V +WN +I G NGLF E + F+RM+ EG PN T+ +LSAC
Sbjct: 417 AIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEG-FRPNGTTVSCLLSACG 475
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LG L K +H YA + V N LIDMY KCG + A +F++ + L TWN+
Sbjct: 476 HLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNS 535
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+ LA+HG A+++F+ M+N G PD +TF+G+L ACTH G V+EGL YF+ M ++
Sbjct: 536 LINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEH 595
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P+IEHYGC+VDLL RAGR +A++F+ M ++ D VIW +LL +CR+++++ELAE A
Sbjct: 596 GIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACRIHRHLELAEHA 655
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR-DTGFKKLPGCSSIEVNE 542
+ L +L P N VML+N+Y + G W++V +++ M+ D KKLPGCS IEV+
Sbjct: 656 IRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDR 712
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 286/533 (53%), Gaps = 37/533 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T A+ ++ AR++F++I D+NVVSWNAM +GYA+N + LF M D +
Sbjct: 102 LLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDV-- 159
Query: 100 CFTFPIVLKSCVKINALREGEELH----------CLVLKNGF-------RANIFVG---- 138
++ ++ +K +RE EL C L +G+ A + G
Sbjct: 160 --SWLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQT 217
Query: 139 ------TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+I Y+ ++ A ++F EM E++V+ T+++ GY+ G + +A +F+
Sbjct: 218 RNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDM 277
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P RD + WNT++ G++ + +A KLF +MP +D ISWN +L GY GD++ F
Sbjct: 278 PHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFR 337
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P ++ SWN LI GY + G L M+ G + P+ AT+ V+S CA L +L
Sbjct: 338 RAPNKDAISWNTLISGYKDEG----ALSLLSEMI-RGGLKPDQATLSVVISICASLVSLG 392
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K VH++A G++ + V ++LI MY+KCG+I A VF + +D +TWN +I+ A
Sbjct: 393 CGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYA 452
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG AL +F M AG PD TF+ IL AC H G + EG +F+SM D+++VP+
Sbjct: 453 YHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRS 512
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY CMVDLL R+G + +A DF +R+P + W L C + ++L E+ + +
Sbjct: 513 DHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLK 572
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN-EVV 544
P + + +LSNIY W A ++ M++ G KK GCS IE+ EVV
Sbjct: 573 ARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVV 625
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 210/440 (47%), Gaps = 42/440 (9%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKIN 114
FD+++++NV +WN M +G +N +L K DAMP N ++ +L +
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNR------MLAEARKVFDAMPVRNSVSWAALLTGYARCG 110
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ E EL + N+ A++ Y+ ++ A ++F M R+ V W +MI+
Sbjct: 111 RVAEARELFNRIPDR----NVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMIS 166
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
GYI + AR LF+ P + N ++SGY+++ M A LF QM ++ +SWN M
Sbjct: 167 GYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVM 226
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++GYA G + +RLF+EMPE++V S ++ GY NG FK M P+
Sbjct: 227 ITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDM-------PH 279
Query: 295 DATIV--TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
T+ T++ R LD + + +++E + NA++ Y + G +++A
Sbjct: 280 RDTVAWNTMMDGFVRNDRLDDA--LKLFSEMP--DRDQISWNAILQGYVQQGDMDSANAW 335
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F KD I+WNT+ISG + GALSL EM G PD T ++ C LV
Sbjct: 336 FRRAPNKDAISWNTLISGY----KDEGALSLLSEMIRGGLKPDQATLSVVISICA--SLV 389
Query: 413 EEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G M ++I EH ++ + ++ G ++EA V + ++ D V W
Sbjct: 390 SLGCG---KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQ-VFELILQRDTVTWN 445
Query: 469 NLLGSCRVYKNVELAELALE 488
++ + Y LA+ AL+
Sbjct: 446 AMIAT---YAYHGLADEALK 462
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + +G E + +I+ ++ ++ A ++F+ I ++ V+WNAM YA +
Sbjct: 397 VHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGL 456
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ +F M K P+ TF +L +C L EG
Sbjct: 457 ADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEG 495
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 291/544 (53%), Gaps = 39/544 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A+ + +A ++F + +++VVSWN + + +++ R + + M P+
Sbjct: 231 MLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPD 290
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L +C ++++L G++LH V++N + +V +A++ELY+ + A +VF
Sbjct: 291 STTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFS 350
Query: 160 EMDERNVVVWTSMINGYISCG-----------------------------------DIVS 184
+ +RN V WT +I G++ G DI
Sbjct: 351 SLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICL 410
Query: 185 ARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
L L R V++ N+++S Y N+ A +F+ M ++D++SW M++ Y+
Sbjct: 411 GSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQ 470
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G++ + + F++M RNV +WN ++G Y +G + L + MLTE V P+ T VT
Sbjct: 471 VGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVT 530
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+ CA +GA + + G + V NA+I MY+KCG I A F+ + KD
Sbjct: 531 LFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKD 590
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
L++WN +I+G + HG G A+ +F ++ N G PD I+++ +L C+H GLVEEG YF
Sbjct: 591 LVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFD 650
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M D++I P +EH+ CMVDLL RAG L EA + + MP++ A +W LL +C+ + N
Sbjct: 651 MMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNN 710
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+LAELA + L +L+ +++L+ +Y D G+ D A+++ MRD G KK PG S +EV
Sbjct: 711 DLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEV 770
Query: 541 NEVV 544
N V
Sbjct: 771 NNRV 774
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 202/447 (45%), Gaps = 51/447 (11%)
Query: 30 LEKSDYITPRIIT------ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
L + + P +IT A+L ++ A ++F ++ ++V SWN + +GY Q+
Sbjct: 82 LLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLN 141
Query: 84 VVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
+ +F M++ D++PN FTF V+KSC + +L L+ K + + V TAL+
Sbjct: 142 ALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
++ A++ A K F + ++ SM+ GY + A +F+ PERDV+ WN
Sbjct: 202 DMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNM 261
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDV-------------------ISW------------ 231
++S + EA + M K V + W
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL 321
Query: 232 --------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
+ M+ YA G +E KR+F + +RN SW LIGG+ G F E ++ F
Sbjct: 322 PHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFN 381
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
+M E A + T++S C + +H +G+ V V N+LI MYAKC
Sbjct: 382 QMRAELMAVDQFA-LATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKC 440
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G ++NA +FN M +D+++W +I+ + G A A F +M + IT+ +L
Sbjct: 441 GNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR----NVITWNAML 496
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVP 430
A G E+GL + M + ++P
Sbjct: 497 GAYIQHGAEEDGLKMYSDMLTEKDVIP 523
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 182/417 (43%), Gaps = 52/417 (12%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
T A LE K LH QV+ + Y+ ++ A+ A+++F + D+
Sbjct: 299 TACARLSSLEWGKQLH---VQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDR 355
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
N VSW + G+ Q V LF QM+ + F ++ C + G +LH
Sbjct: 356 NSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLH 415
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
L LK+G + V +LI +Y+ ++ A +F M ER++V WT MI Y G+I
Sbjct: 416 SLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIA 475
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF-DQMPKKDVI-SW---------- 231
AR F+ R+VI WN ++ YI + K++ D + +KDVI W
Sbjct: 476 KAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGC 535
Query: 232 ----------------------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
N +++ Y+ G + E ++ F+ + +++ SWN
Sbjct: 536 ADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWN 595
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I GY+ +G+ + ++ F +L +G P+ + V VLS C+ G ++ K+ Y +
Sbjct: 596 AMITGYSQHGMGKQAIEIFDDILNKG-AKPDYISYVAVLSGCSHSGLVEEGKF---YFDM 651
Query: 324 NGYQGNVCVG----NALIDMYAKCGIIENAVDVFNSMDTKDLI-TWNTIISGLAMHG 375
N+ G + ++D+ + G + A ++ + M K W ++S HG
Sbjct: 652 MKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 708
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 143/316 (45%), Gaps = 50/316 (15%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLF-DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V L NT++ Y+ + +AR L D++ + +VI+ N M++GYA G + + LF MP
Sbjct: 60 VFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMP 119
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
R+V SWN ++ GY +G F LD F M G PN T V+ +C LG
Sbjct: 120 TRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALG------ 173
Query: 316 WVHVYAEYNGY------QGNVCVGNALIDMYAKCGI------------------------ 345
W V + G Q + V AL+DM +CG
Sbjct: 174 WHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLV 233
Query: 346 -------IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
+++A+++F SM +D+++WN +IS L+ GR AL + +M G PD T
Sbjct: 234 GYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTT 293
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVK 456
+ L AC + +E G + + +P I+ Y MV+L A+ G EA
Sbjct: 294 YTSSLTACARLSSLEWGKQLHVQVIRN---LPHIDPYVASAMVELYAKCGCFKEAKRVFS 350
Query: 457 RMPIEADAVIWANLLG 472
+ + ++V W L+G
Sbjct: 351 SLR-DRNSVSWTVLIG 365
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 185/462 (40%), Gaps = 76/462 (16%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF-GEMDERN 165
L+SC +AL LH ++ G + +F+ L+ Y + A+ A + E+ E N
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF----- 220
V+ M+NGY G + A LF P RDV WNTI+SGY + A +F
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 221 --DQMPKK----------DVISWNT-------MLSGYANNGD----------------VE 245
D +P + W+ +LS + + D ++
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMD 211
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM---------------LTEGR 290
+ F + + N ++ GYA + L+ FK M GR
Sbjct: 212 FASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGR 271
Query: 291 ---------------VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
V P+ T + L+ACARL +L++ K +HV N + V +A
Sbjct: 272 VREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA 331
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
++++YAKCG + A VF+S+ ++ ++W +I G +G + ++ LF++M+ D
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVD 391
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
++ C + + G S S+ + + ++ + A+ G L A + +
Sbjct: 392 QFALATLISGCCNTMDICLG-SQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA-ELI 449
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
E D V W ++ + Y V A E ++ +N
Sbjct: 450 FNFMAERDIVSWTGMITA---YSQVGNIAKAREFFDDMSTRN 488
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 283/522 (54%), Gaps = 43/522 (8%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+++ +N M A + V+ LF +++ P+ FT P+VLKS ++ + EGE++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K G + +V +L+ +Y++ IE +KVF EM +R+VV W +I+ Y+ G
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 184 SARCLFELAP---------------------------------------ERDVILWNTIV 204
A +F+ E V + N +V
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALV 189
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+ + +AR +FD M K+V W +M+ GY + G ++E + LFE P ++V W
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
++ GY F E L+ F+ M T G + P++ +V++L+ CA+ GAL+ KW+H Y N
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ VG AL+DMYAKCG IE A++VF + +D +W ++I GLAM+G AL L+
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+EM+N G D ITF+ +L AC H G V EG F SM +++ P+ EH C++DLL R
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Query: 445 AGRLAEAVDFVKRMPIEADAV---IWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
AG L EA + + +M E+D ++ +LL + R Y NV++AE E+L ++E + +
Sbjct: 429 AGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH 488
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+L+++Y RW+DV ++ M+D G +K PGCSSIE++ V
Sbjct: 489 TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGV 530
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 43/379 (11%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
++ V +GLE Y++ ++ A L ++ K+FD++ ++VVSWN + + Y N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 79 EFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ +F +M + + + T L +C + L GE ++ V+ F ++ +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
G AL++++ ++ A VF M ++NV WTSM+ GY+S G I AR LFE +P +DV
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEECK----- 248
+LW +++GY+ EA +LF M + N ++L+G A G +E+ K
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 249 ------------------------------RLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+F E+ ER+ SW LI G A NG+
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRA 364
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVHVYAEYNGYQGNVCVGNALI 337
LD + M G V + T V VL+AC G + + K H E + Q + LI
Sbjct: 365 LDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 338 DMYAKCGIIENAVDVFNSM 356
D+ + G+++ A ++ + M
Sbjct: 424 DLLCRAGLLDEAEELIDKM 442
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 281/532 (52%), Gaps = 67/532 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNG 74
KHLHQ ++ L+ + + I + + L YA +F +T N+ +N +
Sbjct: 25 KHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIFLYNTIIRA 84
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ + + LF +++ P+ ++FP LK+ ++++A + G + H ++
Sbjct: 85 LSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQAIR------ 138
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
FG +V+V S+I Y S
Sbjct: 139 -----------------------FGLHSHLHVLV--SLIRMYSSS--------------- 158
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMP--KKDVISWNTMLSGYANNGDVEECKRLFE 252
++ +ARKLFD +P ++V WN ML+ YA D+ + LF+
Sbjct: 159 -----------------HISDARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHLFD 201
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
MP+RN+ SW LI GYA+ + + F+ M + V P++ T++ VLSACA+LGAL+
Sbjct: 202 SMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQN-VVPDEITLLAVLSACAQLGALE 260
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+W+ Y + +G NV + NALIDMYAK G I+ A+ +F SM K ++TW T+I+GLA
Sbjct: 261 LGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLA 320
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG G AL +F M+ P+ ITFI +L AC+H+GLV+ S+F +M Y+I P+I
Sbjct: 321 LHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKI 380
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCM+DLL RAG L EA +++MP E +A IW +LL + + + L E L+ L E
Sbjct: 381 EHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIE 440
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LEP N N+ +LSNIY LGRWK ++ MRD G KK+PG S IEVN V
Sbjct: 441 LEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNNRV 492
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 298/578 (51%), Gaps = 51/578 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+QL +TK + T + + ++ R++ A + A+++FD I + + +
Sbjct: 49 KQLTSTKVAPSVPTNIPS-------HLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCS 101
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ + + + L+ ++ P+ F V K+C +E+H ++
Sbjct: 102 TLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRC 161
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG--------- 180
G ++ F+G ALI Y K +E A +VF ++ ++VV WTSM + Y++CG
Sbjct: 162 GMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVF 221
Query: 181 --------------------------DIVSARCLFELAPER----DVILWNTIVSGYIDV 210
D+ S R + A +V + + +VS Y
Sbjct: 222 CEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARC 281
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV----FSWNGLI 266
++ +AR +FD MP +DV+SWN +L+ Y N + ++ LF +M + V +WN +I
Sbjct: 282 LSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVI 341
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GG NG + ++ ++M G PN TI + L AC+ L +L K VH Y +
Sbjct: 342 GGCMENGQTEKAVEMLRKMQNLG-FKPNQITISSFLPACSILESLRMGKEVHCYVFRHWL 400
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
G++ AL+ MYAKCG + + +VF+ + KD++ WNT+I AMHG G L LF
Sbjct: 401 IGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFES 460
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M +G P+ +TF G+L C+H LVEEGL F SM D+ + P HY CMVD+ +RAG
Sbjct: 461 MLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAG 520
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
RL EA +F++RMP+E A W LLG+CRVYKNVELA+++ +L E+EP NP N+V L N
Sbjct: 521 RLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFN 580
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
I W + + ++ M++ G K PGCS ++V + V
Sbjct: 581 ILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRV 618
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 28/373 (7%)
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV---ISWNT-------MLSGY 238
E+ R++I++ ++ + + + ++ ++ Q+ V + N +L
Sbjct: 17 LEIDHSRELIIFGFVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAA 76
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
N GD ++LF+ +P+ + + + LI + GL E + + + G + P+++
Sbjct: 77 LNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG-IKPHNSVF 135
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+TV AC G K VH A G + +GNALI Y KC +E A VF+ +
Sbjct: 136 LTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVV 195
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
KD+++W ++ S G L++F EM G P+ +T IL AC+ + ++ G +
Sbjct: 196 KDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRA- 254
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
A+ + ++ + +V L AR + +A MP D V W +L + +
Sbjct: 255 IHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMP-HRDVVSWNGVLTA--YFT 311
Query: 479 NVELAELALERLTELEPKN-PANFVMLSNIYG---DLGRWKDVARIKVAMRDTGFKK--- 531
N E + L +++ K A+ + + G + G+ + + M++ GFK
Sbjct: 312 NREY-DKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370
Query: 532 -----LPGCSSIE 539
LP CS +E
Sbjct: 371 TISSFLPACSILE 383
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 298/559 (53%), Gaps = 48/559 (8%)
Query: 28 SGLEKSDYITPRIITACA--QLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFHRTV 84
SGL + + R++ CA ++ +A + + T+ N M G+ +
Sbjct: 57 SGLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHA 116
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVGTALIE 143
+ LF ++ + + T +K+ ++ E +HC+ K GF ++ G AL+
Sbjct: 117 LTLFRRVLRDRLAVDARTIVFAVKAAATSSS--PTEAIHCVAFKRGFIGQSVLAGNALVH 174
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG----------------------- 180
+Y++ + A K+F EM +R+VV WT++I+GY G
Sbjct: 175 MYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEV 234
Query: 181 DIVSA-----------------RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
+V+A +C+ E V L N +V + + A+++FD M
Sbjct: 235 TLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGM 294
Query: 224 PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
P KDV SW +M+S YA GD+E +LF+E+P RNV SW+ ++ Y++ + E + F
Sbjct: 295 PIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFN 354
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH-VYAEYNGYQGNVCVGNALIDMYAK 342
M+ G V P DAT+V+VLSACA+L +LD W++ Y + + + NA IDM+AK
Sbjct: 355 DMIAAG-VEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAK 413
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG + A +F++M+ K++++WNT+I +HG+ AL LF E K G +PD T+IG+
Sbjct: 414 CGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGV 473
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+H GLV EG +F+ M + Y I P+ EHY CM+DLL + G L EA + + MP+ A
Sbjct: 474 LSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGA 533
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
D W LL +CR++ NVE+ + A ++L L+P + +V++S IY +W V ++
Sbjct: 534 DEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRT 593
Query: 523 AMRDTGFKKLPGCSSIEVN 541
MRD KK PGCSSIEV+
Sbjct: 594 VMRDRRVKKNPGCSSIEVD 612
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 22 QTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFH 81
T +V+ +E + ++ I A+ + A ++F + D+NVVSWN M + +
Sbjct: 389 DTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQP 448
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+ LF + K +P+ T+ VL +C + EG
Sbjct: 449 EEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGR 487
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 291/538 (54%), Gaps = 24/538 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+SG + Y+ ++ A + AR++F++ ++VSWN + GY Q
Sbjct: 126 QLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAG 185
Query: 80 FHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA---NI 135
+F M + + + N K CV+ A R + NG R ++
Sbjct: 186 EVEEAERVFEGMPERNTIASNSMIALFGRKGCVE-KARR---------IFNGVRGRERDM 235
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS-CGDIVS---ARCLFEL 191
+A++ Y + E A +F EM V V ++ +S C +++ R + L
Sbjct: 236 VSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGL 295
Query: 192 AP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEE 246
A E V L N ++ Y +++AR++FD + D+ISWN+M+SGY G +++
Sbjct: 296 AVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQD 355
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LF MPE++V SW+ +I GYA + F E L F+ M G V P++ +V+ +SAC
Sbjct: 356 AEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHG-VRPDETALVSAISACT 414
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L LD KW+H Y N Q NV + LIDMY KCG +ENA++VF +M+ K + TWN
Sbjct: 415 HLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNA 474
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I GLAM+G +L++F +MK G +P+ ITF+G+L AC HMGLV +G YF SM ++
Sbjct: 475 VILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEH 534
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I I+HYGCMVDLL RAG L EA + + MP+ D W LLG+CR +++ E+ E
Sbjct: 535 KIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERL 594
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L +L+P + V+LSNIY G W +V I+ M G K PGCS IE N V
Sbjct: 595 GRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTV 652
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 211/445 (47%), Gaps = 72/445 (16%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQ---LKQMTYARKMFDKITDQNVV 66
+ + +H Q+ +Q + +GL Y R+I + L Y+ ++F+ + + N
Sbjct: 11 QSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTF 70
Query: 67 SWNAMFNG--YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+WN + Y QN H+ ++ + A P+ +T+PI+L+ C + EG +LH
Sbjct: 71 TWNTIMRAHLYLQNSPHQALL-HYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHA 129
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+ +GF +++V L+ LY+ ++ +A +VF E ++V W +++ GY+ G++
Sbjct: 130 HAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEE 189
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM--PKKDVISWNTMLSGYANNG 242
A +FE PER+ I N++++ + + +AR++F+ + ++D++SW+ M+S Y N
Sbjct: 190 AERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNE 249
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
EE LF EM V ++ +V+ L
Sbjct: 250 MGEEALVLFVEMKGSGVAV--------------------------------DEVVVVSAL 277
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA--------------------- 341
SAC+R+ ++ +WVH A G + V + NALI +Y+
Sbjct: 278 SACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDL 337
Query: 342 -----------KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+CG I++A +F SM KD+++W+ +ISG A H + AL+LF EM+
Sbjct: 338 ISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLH 397
Query: 391 GEMPDGITFIGILCACTHMGLVEEG 415
G PD + + ACTH+ ++ G
Sbjct: 398 GVRPDETALVSAISACTHLATLDLG 422
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 293/531 (55%), Gaps = 13/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQM-TYARKMFDKITD-QNVVSWNAMFNGYAQ 77
QIQTQ++T L + D I +++T + +Y+ + I + S+N + + YA
Sbjct: 24 QIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAV 83
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ R + + P+ FTFP V K+C K + +REG+++H +V K GF +I+V
Sbjct: 84 CDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYV 143
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---ELAPE 194
+L+ Y A KVFGEM R+VV WT +I G+ G A F ++ P
Sbjct: 144 QNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPN 203
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSGYANNGDVEECKRL 250
+ + SG + ++ + + + K+ + + N ++ Y + + R+
Sbjct: 204 LATYVCVLVSSGRVGCLSL--GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRV 261
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F E+ +++ SWN +I G + E +D F M T + P+ + +VLSACA LGA
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+D +WVH Y G + + +G A++DMYAKCG IE A+++FN + +K++ TWN ++ G
Sbjct: 322 VDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG 381
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM-AMDYSIV 429
LA+HG G +L F EM G P+ +TF+ L AC H GLV+EG YF M + +Y++
Sbjct: 382 LAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLF 441
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV-ELAELALE 488
P++EHYGCM+DLL RAG L EA++ VK MP++ D I +L +C+ + EL + L+
Sbjct: 442 PKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILD 501
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++E ++ +V+LSNI+ RW DVARI+ M+ G K+PG S IE
Sbjct: 502 SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L H + ++T+G++ +I I+ A+ + A ++F+ I +NV +WNA
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
+ G A + + F +M KL PN TF L +C + EG
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 282/537 (52%), Gaps = 49/537 (9%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S+ + + H H+ V + + ++I + + + A ++F+ + ++ V+W
Sbjct: 24 SKYVSSHTHQHEFNNNNVIA--------SNKLIASYVRCGDIDSAVRVFEDMKVKSTVTW 75
Query: 69 NAMFNGYAQNEFH-RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N++ +A+ H LF ++ + PN ++ I+L +C H L
Sbjct: 76 NSILAAFAKKPGHFEYARQLFEKIPQ----PNTVSYNIML-AC----------HWHHL-- 118
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ A F M ++V W +MI+ G + AR
Sbjct: 119 ----------------------GVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARR 156
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF PE++ + W+ +VSGY+ ++ A + F P + VI+W M++GY G VE
Sbjct: 157 LFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELA 216
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+RLF+EM R + +WN +I GY NG + L F+ ML G V PN ++ +VL C+
Sbjct: 217 ERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETG-VKPNALSLTSVLLGCSN 275
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L AL K VH + G +L+ MY+KCG +++A ++F + KD++ WN +
Sbjct: 276 LSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAM 335
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISG A HG G AL LF EMK G PD ITF+ +L AC H GLV+ G+ YF +M D+
Sbjct: 336 ISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFG 395
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I + EHY CMVDLL RAG+L+EAVD +K MP + I+ LLG+CR++KN+ LAE A
Sbjct: 396 IETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAA 455
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L EL+P +V L+N+Y RW VA I+ +M+D K+PG S IE+N VV
Sbjct: 456 KNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVV 512
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 189/429 (44%), Gaps = 38/429 (8%)
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARK 218
E + NV+ +I Y+ CGDI SA +FE + + WN+I++ + E AR+
Sbjct: 35 EFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQ 94
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LF+++P+ + +S+N ML+ + ++ V + + F+ MP ++V SWN +I A GL E
Sbjct: 95 LFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEA 154
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
F M + V + + +V+ AC L A V Y +V A+I
Sbjct: 155 RRLFSAMPEKNCV--SWSAMVSGYVACGDLDAA-------VECFYAAPMRSVITWTAMIT 205
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
Y K G +E A +F M + L+TWN +I+G +GR L LF M G P+ ++
Sbjct: 206 GYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALS 265
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
+L C+++ ++ G Q + + +V + ++ G L +A + ++
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQ-LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQI 324
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK----NPANFV---MLSNIYG-- 509
P D V W ++ Y + AL E++ + + FV + N G
Sbjct: 325 P-RKDVVCWNAMISG---YAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLV 380
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLL 569
DLG V RD G + P + V+ + G LS +D +IK +
Sbjct: 381 DLG----VQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVD----------LIKSM 426
Query: 570 PQNNHPLTF 578
P HP +
Sbjct: 427 PFKPHPAIY 435
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 264/483 (54%), Gaps = 69/483 (14%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M G++Q+E +V L+ +M + +A PN FT+ ++ C + LREGE++H V+ NG
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ N+FV T S++N Y
Sbjct: 61 YCTNVFVRT-------------------------------SLVNLY-------------- 75
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
I GY VR +AR++FD++ ++++SWN++L+GY GDV+ +R+
Sbjct: 76 -----------AIAGGYDGVR---KARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRI 121
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+EMPERNV SW +I G A G + L F M G V + +V LSACA LG
Sbjct: 122 FDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGD 180
Query: 311 LDFSKWVHVYAEYNGYQGN----VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L W+H Y + + GN V + N+LI MYA CG+I+ A VF M + I+W +
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTS 240
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGE---MPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
+I+G A G AL +F M+ G PDGITFIG+LCAC+H G V++G +F+ M
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ IVP+IEHYGCMVDLL+RAG L EA ++ MP++ + +W LLG CR++KN ELA
Sbjct: 301 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELA 360
Query: 484 ELALERLT-ELEPKNPANF-VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
++L EL+P A + V+LSN+Y RW+DVA ++ M + G +K G S +++N
Sbjct: 361 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQIN 420
Query: 542 EVV 544
VV
Sbjct: 421 GVV 423
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 27/238 (11%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD++ ++NVVSW M G AQ + + LF +M++ + L +C +
Sbjct: 118 ARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAE 177
Query: 113 INALREGEELHCLVLKNGFRAN----IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+ L+ G +H + + N + + +LI +Y++ I+ AYKVF M +R+ +
Sbjct: 178 LGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS 237
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDV------------ILWNTIVSGYIDVRNMIEA 216
WTSMI G+ G A +F+ +L +G++D +
Sbjct: 238 WTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVD-----QG 292
Query: 217 RKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGG 268
R F+ M KK + + M+ + G ++E RL E MP + N W L+GG
Sbjct: 293 RHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGG 350
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 286/533 (53%), Gaps = 37/533 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T A+ ++ AR++F++I D+NVVSWNAM +GYA+N + LF M D +
Sbjct: 102 LLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDV-- 159
Query: 100 CFTFPIVLKSCVKINALREGEELH----------CLVLKNGF-------RANIFVG---- 138
++ ++ +K +RE EL C L +G+ A + G
Sbjct: 160 --SWLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQT 217
Query: 139 ------TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+I Y+ ++ A ++F EM E++V+ T+++ GY+ G + +A +F+
Sbjct: 218 RNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDM 277
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P RD + WNT++ G++ + +A KLF +MP +D ISWN +L GY GD++ F
Sbjct: 278 PHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFR 337
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P ++ SWN LI GY + G L M+ G + P+ AT+ V+S CA L +L
Sbjct: 338 RAPNKDAISWNTLISGYKDEG----ALSLLSEMI-RGGLKPDQATLSVVISICASLVSLG 392
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K VH++A G++ + V ++LI MY+KCG+I A VF + +D +TWN +I+ A
Sbjct: 393 CGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYA 452
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG AL +F M AG PD TF+ IL AC H G + EG +F+SM D+++VP+
Sbjct: 453 YHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRS 512
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY CMVDLL R+G + +A DF +R+P + W L C + ++L E+ + +
Sbjct: 513 DHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLK 572
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN-EVV 544
P + + +LSNIY W A ++ M++ G KK GCS IE+ EVV
Sbjct: 573 ARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVV 625
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 210/440 (47%), Gaps = 42/440 (9%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKIN 114
FD+++++NV +WN M +G +N +L K DAMP N ++ +L +
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNR------MLAEARKVFDAMPVRNSVSWAALLTGYARCG 110
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ E EL + N+ A++ Y+ ++ A ++F M R+ V W +MI+
Sbjct: 111 RVAEARELFNRIPDR----NVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMIS 166
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
GYI + AR LF+ P + N ++SGY+++ M A LF QM ++ +SWN M
Sbjct: 167 GYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVM 226
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++GYA G + +RLF+EMPE++V S ++ GY NG FK M P+
Sbjct: 227 ITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDM-------PH 279
Query: 295 DATIV--TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
T+ T++ R LD + + +++E + NA++ Y + G +++A
Sbjct: 280 RDTVAWNTMMDGFVRNDRLDDA--LKLFSEMP--DRDQISWNAILQGYVQQGDMDSANAW 335
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F KD I+WNT+ISG + GALSL EM G PD T ++ C LV
Sbjct: 336 FRRAPNKDAISWNTLISGY----KDEGALSLLSEMIRGGLKPDQATLSVVISICA--SLV 389
Query: 413 EEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G M ++I EH ++ + ++ G ++EA V + ++ D V W
Sbjct: 390 SLGCG---KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQ-VFELILQRDTVTWN 445
Query: 469 NLLGSCRVYKNVELAELALE 488
++ + Y LA+ AL+
Sbjct: 446 AMIAT---YAYHGLADEALK 462
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL I+T G E + +I+ ++ ++ A ++F+ I ++ V+WNAM YA
Sbjct: 398 HLWAIKT-----GFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYA 452
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + +F M K P+ TF +L +C L EG
Sbjct: 453 YHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEG 495
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
G+V N I+ + + G + A VF+ M +++ TWN ++SGL + A A +F M
Sbjct: 32 GDVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAM 91
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ + +++ +L G V E F + D ++V + MV AR G
Sbjct: 92 P----VRNSVSWAALLTGYARCGRVAEARELFNRIP-DRNVVS----WNAMVSGYARNGM 142
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ A + MP D V W ++ K+V A
Sbjct: 143 VKRARELFDMMPWR-DDVSWLTMISGYIKRKHVREAR 178
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 287/518 (55%), Gaps = 9/518 (1%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ +I ++ M ARK+FD I ++N VSW + +GYA LF M++
Sbjct: 149 FVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRRE 208
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ + F + VL + + + G+++HCL LKNG + VG AL+ +Y ++ A
Sbjct: 209 EGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDA 268
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---ELAPER-DVILWNTIVSGYIDV 210
K F +++ + W++MI GY GD A LF L + + +++ D+
Sbjct: 269 LKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328
Query: 211 RNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
+ E +++ K + ++ YA G + + ++ F+ + E ++ W +I
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMI 388
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GYA NG L + RM E R+ P++ T+ +VL AC+ L AL+ K +H G+
Sbjct: 389 SGYAQNGENETALTLYCRMQME-RIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGF 447
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
V +G+AL MYAKCG +E+ VF M ++D++TWN +ISGL+ +G G AL LF E
Sbjct: 448 SLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEE 507
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
+++ PD +TF+ +L AC+HMGLVE G YF+ M ++ IVP++EHY CMVD+L+RAG
Sbjct: 508 LRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAG 567
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+L E +F++ I+ +W LLG+CR Y+N EL A E+L EL + + +++LS+
Sbjct: 568 KLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSS 627
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
IY LGR DV R++ M+ G K PGCS IE+ V
Sbjct: 628 IYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQV 665
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 252/517 (48%), Gaps = 19/517 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I Q++ +G S Y+T ++ A+ + A+ +F+ IT+++VVSWN + NGY+Q
Sbjct: 32 IHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGT 91
Query: 81 --HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ V+ LF +M+ + +PN TF V + G + H L +K ++FVG
Sbjct: 92 VGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVG 151
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE---- 194
++LI +Y + A KVF + ERN V W ++I+GY A LF L
Sbjct: 152 SSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGA 211
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKR 249
D ++ +++S + V +++ K + K+ + N +++ Y G +++ +
Sbjct: 212 HDKFIYTSVLSA-LTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALK 270
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
FE +++ +W+ +I GYA G E L+ F M G P++ T V V++AC+ +G
Sbjct: 271 TFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK-PSEFTFVGVINACSDIG 329
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL+ K +H Y+ GY+ + AL+DMYAKCG + +A F+ + D++ W ++IS
Sbjct: 330 ALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMIS 389
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A +G AL+L+ M+ MP +T +L AC+ + +E+G + + Y
Sbjct: 390 GYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQG-KQIHAQTIKYGFS 448
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
++ + + A+ G L + +RMP D + W ++ + +N E + ALE
Sbjct: 449 LEVPIGSALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWNAMISG--LSQNGEGLK-ALEL 504
Query: 490 LTEL-EPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
EL ++V N+ V R KV R
Sbjct: 505 FEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFR 541
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 190/420 (45%), Gaps = 85/420 (20%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P +F +L C + L++G+ +H +L+ G +++++ +L+ LY+ +I A V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFEL-------------------------A 192
F + ++VV W +INGY G V + EL +
Sbjct: 68 FESITNKDVVSWNCLINGYSQKG-TVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSS 126
Query: 193 PER-----------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTML 235
PE DV + +++++ Y + M++ARK+FD +P+++ +SW T++
Sbjct: 127 PETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
SGYA E M FE + F M E +D
Sbjct: 187 SGYA-----------MERMA--------------------FEAWELFXLMRREEGA--HD 213
Query: 296 ATIVT-VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
I T VLSA + + K +H A NG VGNAL+ MY KCG +++A+ F
Sbjct: 214 KFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFE 273
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
KD ITW+ +I+G A G AL+LF+ M G P TF+G++ AC+ +G +EE
Sbjct: 274 LSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEE 333
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA---VDFVKRMPIEADAVIWANLL 471
G ++ QI +VD+ A+ G L +A D++K E D V+W +++
Sbjct: 334 G-KQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLK----EPDIVLWTSMI 388
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 188/393 (47%), Gaps = 30/393 (7%)
Query: 1 MKDTTGAHSEQLETT-----------KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ 49
M+ GAH + + T+ + QI + +GL + ++T +
Sbjct: 205 MRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGC 264
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+ A K F+ D++ ++W+AM GYAQ + LF M P+ FTF V+ +
Sbjct: 265 LDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINA 324
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C I AL EG+++H LK G+ I+ TAL+++Y+ ++ A K F + E ++V+W
Sbjct: 325 CSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLW 384
Query: 170 TSMINGYISCGDIVSARCLF-ELAPERDV---ILWNTIVSGYIDVRNMIEARKLFDQMPK 225
TSMI+GY G+ +A L+ + ER + + +++ + + + +++ Q K
Sbjct: 385 TSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIK 444
Query: 226 K----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+V + + + YA G +E+ +F MP R++ +WN +I G + NG + L+
Sbjct: 445 YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALEL 504
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMY 340
F+ L G P+ T V VLSAC+ +G ++ K + + + G V ++D+
Sbjct: 505 FEE-LRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDIL 563
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
++ G + +TK+ I TI G+ +
Sbjct: 564 SRAGKLH---------ETKEFIESATIDHGMCL 587
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 289/502 (57%), Gaps = 12/502 (2%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I A ++ ++ ARK+FD++ ++VV+WN+M + Y QN + LF M + N
Sbjct: 36 IVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMP----LRNV 91
Query: 101 FTFPIVLKSCVKINALREG-EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ +CV+ + L++ L KN N A+I + ++ A ++F
Sbjct: 92 VSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYN-----AIISGLARCGRMKDAQRLFE 146
Query: 160 EMDERNVVVWTSMINGYISC-GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
M NVV +T+M++GY G I AR LFE P R+ + W +++G ++ EA +
Sbjct: 147 AMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWE 206
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+F +MP+K+ ++ M++G+ G +E+ + LF+E+ R++ SWN ++ GYA NG E
Sbjct: 207 VFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEA 266
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L+ F +M+ G + P+D T V+V ACA L +L+ H +G+ ++ V NALI
Sbjct: 267 LNLFSQMIRTG-MQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALIT 325
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
+++KCG I ++ VF + DL++WNTII+ A HG A S F +M PDGIT
Sbjct: 326 VHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGIT 385
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC G V E ++ F M +Y I P+ EHY C+VD+++RAG+L A + M
Sbjct: 386 FLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQLQRACKIINEM 445
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P +AD+ IW +L +C V+ NVEL ELA R+ L+P N +VMLSNIY G+WKDV
Sbjct: 446 PFKADSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVH 505
Query: 519 RIKVAMRDTGFKKLPGCSSIEV 540
RI+V M++ G KK S +++
Sbjct: 506 RIRVLMKEQGVKKQTAYSWLQI 527
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 122/284 (42%), Gaps = 64/284 (22%)
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ RDV N + + ARKLFD+M KDV++WN+MLS Y NG ++ K L
Sbjct: 23 FSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKAL 82
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F MP RNV SWN +I N + DAF+ + N A+ ++S AR G
Sbjct: 83 FHSMPLRNVVSWNSIIAACVQND---NLQDAFRYLAAAPE--KNAASYNAIISGLARCGR 137
Query: 311 L----------------DFSKWVHVYAEYNGYQG---------------------NVCVG 333
+ ++ V YA G G N V
Sbjct: 138 MKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVE 197
Query: 334 NAL----------------------IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
N L I + K G +E+A D+F + +DL++WN I++G
Sbjct: 198 NGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGY 257
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
A +GRG AL+LF +M G PD +TF+ + AC + +EEG
Sbjct: 258 AQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEG 301
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 161/380 (42%), Gaps = 88/380 (23%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
II+ A+ +M A+++F+ + NVVS+ AM +GYA+ E + +AMP
Sbjct: 128 IISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGG-----IGRARALFEAMPR 182
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ V V IN L E NG E A++VF
Sbjct: 183 RNSVSWV----VMINGLVE----------NGL-------------------CEEAWEVFV 209
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M ++N V T+MI G+ G + AR LF+ RD++ WN I++GY EA L
Sbjct: 210 RMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNL 269
Query: 220 FDQMPK---------------------------------------KDVISWNTMLSGYAN 240
F QM + D+ N +++ ++
Sbjct: 270 FSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSK 329
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G + + + +F ++ ++ SWN +I +A +GL+ + F +M+T V P+ T ++
Sbjct: 330 CGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVS-VQPDGITFLS 388
Query: 301 VLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
+LSAC R G ++ FS V Y + C L+D+ ++ G ++ A + N
Sbjct: 389 LLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYAC----LVDVMSRAGQLQRACKIINE 444
Query: 356 MDTK-DLITWNTIISGLAMH 374
M K D W +++ ++H
Sbjct: 445 MPFKADSSIWGAVLAACSVH 464
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
+K+D +IT + +M AR +F +I +++VSWN + GYAQN + LF+Q
Sbjct: 213 QKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQ 272
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M + P+ TF V +C + +L EG + H L++K+GF +++ V ALI ++S
Sbjct: 273 MIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGG 332
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERDVILWNTIVSG 206
I + VFG++ ++V W ++I + G AR F+ ++ + D I + +++S
Sbjct: 333 IVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSA 392
Query: 207 YIDVRNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
+ E+ LF M P+ + + ++ + G ++ ++ EMP
Sbjct: 393 CCRAGKVNESMNLFSLMVDNYGIPPRSE--HYACLVDVMSRAGQLQRACKIINEMP 446
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE H + ++ G + + +IT ++ + + +F +I+ ++VSWN +
Sbjct: 298 LEEGSKAHAL---LIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTI 354
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-G 130
+AQ+ + F QM + P+ TF +L +C + + E L L++ N G
Sbjct: 355 IAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYG 414
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
L+++ S ++ A K+ EM
Sbjct: 415 IPPRSEHYACLVDVMSRAGQLQRACKIINEM 445
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 293/545 (53%), Gaps = 13/545 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
Q+ T+ +I V+ GL++ ++ ++ + + YAR +FDK+ +++VVSW+
Sbjct: 106 QVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWST 165
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M ++N+ + L +M + P+ ++ +R G+ +H V++N
Sbjct: 166 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 225
Query: 131 FRANIFV--GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
++ V TAL+++Y+ + A ++F + ++ VV WT+MI G I + L
Sbjct: 226 NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKL 285
Query: 189 FELAPERDVI-----LWNTIV----SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
F E ++ + + IV +G + + + A L + ++ ++ Y
Sbjct: 286 FIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALA-TALVDMYG 344
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
D+ + LF+ R+V W ++ YA + + F +M T G V P TIV
Sbjct: 345 KCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG-VRPTKVTIV 403
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++LS CA GALD KWVH Y + + + + AL+DMYAKCG I A +F ++
Sbjct: 404 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 463
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ WN II+G AMHG G AL +F EM+ G P+ ITFIG+L AC+H GLV EG F
Sbjct: 464 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 523
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ M + +VPQIEHYGCMVDLL RAG L EA + +K MPI+ + ++W L+ +CR++KN
Sbjct: 524 EKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKN 583
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+L ELA +L E+EP+N V++SNIY RW D A ++ M+ G KK PG S IE
Sbjct: 584 PQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 643
Query: 540 VNEVV 544
VN V
Sbjct: 644 VNGTV 648
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 226/492 (45%), Gaps = 45/492 (9%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
F P VLK+C +++ + G+E+H VLK G ++FVG AL+ +Y +E A VF +
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 161 MDERNVVVWTSMING------YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
M ER+VV W++MI + +++ ++ P ++ ++V+ + D NM
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMV--SMVNLFADTANMR 212
Query: 215 EARKLFDQMPKKD------VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ + + + V + +L YA G + ++LF + ++ V SW +I G
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
+ E F RM E +FPN+ T+++++ C GAL K +H Y NG+
Sbjct: 273 CIRSNRLEEGTKLFIRM-QEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
++ + AL+DMY KC I NA +F+S +D++ W ++S A A +LF +M+
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+G P +T + +L C G ++ G SY ++ + +VD+ A+
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT----ALVDMYAKC 447
Query: 446 GRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVELAELALERLTELEPK----NP 498
G + A R+ IEA D +W ++ ++ E AL+ E+E + N
Sbjct: 448 GDINAA----GRLFIEAISRDICMWNAIITGFAMHG---YGEEALDIFAEMERQGVKPND 500
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSI 558
F+ L + G + ++ M T F +P ++ GC+ L R +
Sbjct: 501 ITFIGLLHACSHAGLVTEGKKLFEKMVHT-FGLVP--------QIEHYGCMVDLLGRAGL 551
Query: 559 VRAEANMIKLLP 570
+ MIK +P
Sbjct: 552 LDEAHEMIKSMP 563
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 301/584 (51%), Gaps = 73/584 (12%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y+ ++TA A + +AR++FD + +N+V+ N++ + A+ R + LFT + +
Sbjct: 47 YLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQR 106
Query: 95 DAM---------------------------------PNCFTFPIVLKSCVKINALREGEE 121
DA+ P+ T V+ + G +
Sbjct: 107 DAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQ 166
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+HC +L+ GF A F G+ L+++Y+ I A +VF EM+ +NVV+ +MI G + C
Sbjct: 167 VHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKM 226
Query: 182 IVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSG 237
+ AR LFE ERD I W T+V+G EA +F +M + D ++ ++L+
Sbjct: 227 VAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTA 286
Query: 238 YANNGDVEECKRL-----------------------------------FEEMPERNVFSW 262
+EE K++ F M +N+ SW
Sbjct: 287 CGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISW 346
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
+I GY NG E + F M +G + P+D T+ +V+S+CA L +L+ H A
Sbjct: 347 TAMIVGYGQNGCGEEAVRVFSEMQRDG-IKPDDFTLGSVISSCANLASLEEGAQFHCLAL 405
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+G + V V NAL+ +Y KCG IE+A +F+ M D ++W ++ G A G+ +
Sbjct: 406 VSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETID 465
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF +M + G PDG+TFIG+L AC+ GLV++G SYF SM D+ IVP +HY CM+DL
Sbjct: 466 LFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLY 525
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
+R+G L +A +F+K+MP DA WA LL +CR+ ++E+ + A E L +L+P+NPA++V
Sbjct: 526 SRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYV 585
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+L +++ G W DVA+++ MRD KK PGCS I+ V +
Sbjct: 586 LLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHI 629
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 189/401 (47%), Gaps = 50/401 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV------------- 66
Q+ Q++ G + ++ A++ + AR++FD++ +NVV
Sbjct: 166 QVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCK 225
Query: 67 ------------------SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+W M G QN + +F +M+ + +TF +L
Sbjct: 226 MVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILT 285
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+C + AL EG+++H + + + N+FVG+AL+++YS +++ A VF M +N++
Sbjct: 286 ACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIIS 345
Query: 169 WTSMINGYIS--CGDIVSARCLFELAPERDVI-----LWNTIVSGYIDVRNMIEARK--- 218
WT+MI GY CG+ + R E+ +RD I +++S ++ ++ E +
Sbjct: 346 WTAMIVGYGQNGCGE-EAVRVFSEM--QRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402
Query: 219 --LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
L + +S N +++ Y G +E+ RLF+EM + SW L+ GYA G
Sbjct: 403 LALVSGLRPYVTVS-NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAK 461
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGYQGNVCVGNA 335
E +D F++ML++G V P+ T + VLSAC+R G +D + + H + +
Sbjct: 462 ETIDLFEKMLSKG-VKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTC 520
Query: 336 LIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
+ID+Y++ G ++ A + M D W T++S + G
Sbjct: 521 MIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 196/455 (43%), Gaps = 77/455 (16%)
Query: 122 LHCLVLKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+H L+L+ + ++ L+ Y++ + A +VF M RN+V S+++ G
Sbjct: 32 VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91
Query: 181 DIVSARCLFELAPERDVILWNTIVSGY--------------------IDVRN-------- 212
+ LF P+RD + +N +++G+ VR
Sbjct: 92 LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151
Query: 213 MIEARKLFDQMPKKDV-------------ISWNTMLSGYANNGDVEECKRLFEEM----- 254
++ A L D+ + V + + ++ YA G + + +R+F+EM
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211
Query: 255 --------------------------PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
ER+ +W ++ G NGL E LD F+RM E
Sbjct: 212 VMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAE 271
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G V + T ++L+AC L AL+ K +H Y Y+ NV VG+AL+DMY+KC +
Sbjct: 272 G-VGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A VF M K++I+W +I G +G G A+ +F EM+ G PD T ++ +C +
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCAN 390
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
+ +EEG + F +A+ + P + +V L + G + +A M D V W
Sbjct: 391 LASLEEG-AQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWT 448
Query: 469 NL-LGSCRVYKNVELAELALERLTELEPKNPANFV 502
L +G + K E +L + L++ + F+
Sbjct: 449 ALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFI 483
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 12/352 (3%)
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
V A L L L NT+++ Y + AR++FD MP +++++ N++LS A G
Sbjct: 32 VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT-EGRVFPNDATIVTV 301
V + +RLF +P+R+ S+N L+ G++ G A+ +L E V P+ T+ V
Sbjct: 92 LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+ + LG + VH G+ G+ L+DMYAK G I +A VF+ M+ K++
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ NT+I+GL A A +LF A E D IT+ ++ T GL E L F+
Sbjct: 212 VMCNTMITGLLRCKMVAEARALF----EAIEERDSITWTTMVTGLTQNGLESEALDVFRR 267
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD---FVKRMPIEADAVIWANLLGSCRVYK 478
M + + Q +G ++ L E ++ R E + + + L+ +
Sbjct: 268 MRAEGVGIDQYT-FGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCR 326
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+V LAE R+ KN ++ + YG G ++ R+ M+ G K
Sbjct: 327 SVRLAEAVFRRMMW---KNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 36/302 (11%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + + E + ++ ++ ++ + + A +F ++ +N++SW AM GY QN
Sbjct: 298 QIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNG 357
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V +F++M++ P+ FT V+ SC + +L EG + HCL L +G R + V
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+ LY +IE A+++F EM + V WT+++ GY G LFE
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFE--------- 468
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
K+ + K D +++ +LS + +G V++ + F M + +
Sbjct: 469 ------------------KMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHD 510
Query: 260 F-----SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+ +I Y+ +G + + K+M P+ T+LSAC G ++
Sbjct: 511 IVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR----CPDAFGWATLLSACRLRGDMEIG 566
Query: 315 KW 316
KW
Sbjct: 567 KW 568
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 283/519 (54%), Gaps = 22/519 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ +M A +F+ + ++N VSWNAM +G+ QN + F +M + D
Sbjct: 149 MISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVT-- 206
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT--ALIELYSTGKAIEAAYKV 157
+ ++ ++ + L + E + NG V LI Y ++ A +
Sbjct: 207 --SLSALVSGLIQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNL 264
Query: 158 FGEMD-------------ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
F ++ ERNVV W +MI Y+ GD++SAR LF+ P+RD WNT++
Sbjct: 265 FDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMI 324
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
SGY+ V +M EA LF +MP D +SWN M+SGYA +G +E FE MP++N+ SWN
Sbjct: 325 SGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNS 384
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GY NG + ++ F +M EG + T+ ++LS + + L +H
Sbjct: 385 VIAGYEKNGDYIGAINLFIQMQVEGEK-SDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKT 443
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSL 383
+V + NALI MY++CG I A +F M K++I+WN +I G A HG AL L
Sbjct: 444 VIP-DVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYATEALEL 502
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F M++ P ITFI +L AC H GLVEEG F+SM DY + P++EH+ +VD++
Sbjct: 503 FKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVG 562
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
R G+L EA+D + M IE D +W LLG+ RV+ NVE+A +A E L +LEP + +++
Sbjct: 563 RQGQLEEALDLINSMTIEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSVPYIL 622
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
L N+Y D+G+W + A I+ M KK S ++ ++
Sbjct: 623 LYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISWVDSSQ 661
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 180/359 (50%), Gaps = 35/359 (9%)
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+N++ I ++ I A +F +++ RN V W SMI+GY+ G++ AR LF+
Sbjct: 45 SNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEM 104
Query: 193 PERDVILWNTIVSGYIDVRN---MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
PERDV+ WN I+SGY+ R + E R LFD+MP++ +SWNTM+SGYA NG ++E
Sbjct: 105 PERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALG 164
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL-SACARL 308
LF MPE+N SWN ++ G+ NG ++ FKRM D T ++ L S +
Sbjct: 165 LFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPER------DVTSLSALVSGLIQN 218
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVG--NALIDMYAKCGIIENAVDVFNSMD--------- 357
LD ++ + + NG V N LI Y + G ++ A ++F+ +
Sbjct: 219 SELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGR 278
Query: 358 ----TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
+++++WNT+I G A LF +M + D ++ ++ H+ +E
Sbjct: 279 TGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDR----DSFSWNTMISGYVHVLDME 334
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
E + F M P + M+ A++G L A DF +RMP + + V W +++
Sbjct: 335 EASNLFHKMP-----SPDTLSWNLMISGYAQSGSLELAHDFFERMP-QKNLVSWNSVIA 387
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 227/521 (43%), Gaps = 99/521 (19%)
Query: 27 TSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVV 86
TS + + Y + + I+ + ++ AR +FDK+ +N V+WN+M +GY +
Sbjct: 40 TSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARK 99
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
LF +M + D + ++ +++ V R EE L K R + T +I Y+
Sbjct: 100 LFDEMPERDVV----SWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNT-MISGYA 154
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI-------- 198
++ A +F M E+N V W +M++G++ GD+V A F+ PERDV
Sbjct: 155 KNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSG 214
Query: 199 -----------------------------LWNTIVSGYIDVRNMIEARKLFDQMP----- 224
+NT+++GY + EA+ LFD++P
Sbjct: 215 LIQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQ 274
Query: 225 --------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
+++V+SWNTM+ Y GDV ++LF++MP+R+ FSWN +I GY +
Sbjct: 275 GKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDME 334
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E + F +M P+ T+ W N +
Sbjct: 335 EASNLFHKM-------PSPDTL----------------SW-----------------NLM 354
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
I YA+ G +E A D F M K+L++WN++I+G +G GA++LF +M+ GE D
Sbjct: 355 ISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDR 414
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
T G+V+ L + +++P + ++ + +R G + EA
Sbjct: 415 HTL--SSLLSVSSGIVDLQLGMQIHQLVSKTVIPDVPLNNALITMYSRCGAIFEARTIFY 472
Query: 457 RMPIEADAVIWANLLG--SCRVYKNVELAELALERLTELEP 495
M ++ + + W ++G + Y L L R +++P
Sbjct: 473 EMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQP 513
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 303/541 (56%), Gaps = 33/541 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ VV + + +IT + + AR +FDK+ ++ +SWNAM +GY +N+
Sbjct: 156 EVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFEND 215
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M++L P+ T V+ +C + R G +LH V++ + NI V
Sbjct: 216 ECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYN 275
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
+LI++Y + + A VF M+ R+VV WT++I+G C+ L P++
Sbjct: 276 SLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISG-----------CVDNLLPDKALET 324
Query: 196 -----------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKD----VISWNTMLSGYAN 240
D + +++S + + KL + + V+ N+++ Y+
Sbjct: 325 YKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSK 384
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
+E+ +F ++P+++V SW +I G N FE L F++M+ + + PN T+++
Sbjct: 385 CKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSK--PNSVTLIS 442
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
LSACAR+GAL K +H +A G + + NA++D+Y +CG + A++ FN ++ KD
Sbjct: 443 ALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKD 501
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+ WN +++G A G+GA + LF M + PD +TFI +LCAC+ G+V EGL YFQ
Sbjct: 502 VGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQ 561
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M ++Y I P ++HY C+VDLL RAG+L EA +F++RMPI+ D IW LL +CR++++V
Sbjct: 562 RMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHV 621
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L ELA + + + + ++ +++L N+Y D G+W +VA+++ M++ G PGCS +EV
Sbjct: 622 LLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEV 681
Query: 541 N 541
Sbjct: 682 K 682
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 237/470 (50%), Gaps = 32/470 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +F ++ ++++ SWN + GY + F + L+ ++ P+ +TFP VL+SC
Sbjct: 88 AWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAG 147
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
L G E+H V++ F ++ V ALI +Y + +A +F +M R+ + W +M
Sbjct: 148 AMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAM 207
Query: 173 INGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK--- 225
I+GY + + LF EL+ + D++ +++S ++ +L Q+
Sbjct: 208 ISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC----ELLGDERLGTQLHSYVV 263
Query: 226 -----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
++ +N+++ Y + G +E + +F M R+V SW +I G +N L + L+
Sbjct: 264 RTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALE 323
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
+K M G P++ TI +VLSACA LG LD +H AE G+ V V N+LIDMY
Sbjct: 324 TYKTMEITG-TMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMY 382
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KC IE A+++F+ + KD+I+W ++I+GL ++ R AL F +M + P+ +T I
Sbjct: 383 SKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSK-PNSVTLI 441
Query: 401 GILCACTHMGLV---EEGLSYFQSMAMDY-SIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
L AC +G + +E ++ M + +P ++DL R GR+ A++
Sbjct: 442 SALSACARVGALMCGKEIHAHALKAGMGFDGFLPN-----AILDLYVRCGRMRTALNQFN 496
Query: 457 RMPIEADAVIWANLL-GSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
E D W LL G + K + EL +R+ E E NP + +S
Sbjct: 497 LN--EKDVGAWNILLTGYAQKGKGAMVMEL-FKRMVESEI-NPDDVTFIS 542
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 187/427 (43%), Gaps = 76/427 (17%)
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA-NIFVGTALIELYSTG 148
Q K+ +CF I L C EGE + VL + ++ +G AL+ ++
Sbjct: 25 QEVKIPVEEDCFVALIRL--CENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRF 82
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP--------- 193
+ A+ VFG M ER++ W ++ GY G A CL+ + P
Sbjct: 83 GDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVL 142
Query: 194 ------------------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
+ DV + N +++ Y+ +++ AR LFD+MP +D I
Sbjct: 143 RSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRI 202
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
SWN M+SGY N +EC E L+ F RM E
Sbjct: 203 SWNAMISGYFEN---DEC----------------------------LEGLELFFRM-REL 230
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ P+ T+ +V+SAC LG +H Y Y GN+ V N+LI MY G + A
Sbjct: 231 SIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEA 290
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
VF+ M+ +D+++W TIISG + AL + M+ G MPD +T +L AC +
Sbjct: 291 ESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASL 350
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G ++ G+ +A + + ++D+ ++ R+ +A++ ++P + D + W +
Sbjct: 351 GQLDMGMK-LHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTS 408
Query: 470 LLGSCRV 476
++ R+
Sbjct: 409 VINGLRI 415
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 285/530 (53%), Gaps = 42/530 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFN 73
+ L QI +V G+ ++ AC M YARK+FD I+ ++ N M
Sbjct: 11 RSLKQIHGNLVVKGITSRLQPLRELLLACVASFNGGMDYARKVFDGISHPDLFMHNVMVR 70
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GYA + VL+ +++ P+ FTF +L++C + G ++H V+K G+
Sbjct: 71 GYAHSAAPAAAFVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVHGAVVKLGYFK 130
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ FV ALI +++ CGD++ A L + A
Sbjct: 131 DAFVRNALINMHA-------------------------------KCGDLLVAGTLLDEAG 159
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
ERDV+ + +++G+ + AR+LFD+ KD++ WN M++ YA G++E+ + L +
Sbjct: 160 ERDVVARSAVIAGHAAKGELDIARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDR 219
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
PE++V SWN +I GY GL E L+ M G + P++ATIV++LS CA LG+L
Sbjct: 220 APEKDVVSWNTIITGYTAKGLLKEALEVLDEMRCVG-LMPDEATIVSLLSCCANLGSLGT 278
Query: 314 SKWVHVYAEYNGYQGNVCV----GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ +H +G C+ GNAL+ MYAKCG ++ A++VF+ M +D+ TWN+II
Sbjct: 279 GRMIHSLH----LEGRPCISILPGNALVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIG 334
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA HG+ ++ F++M + G P+ I+F+ +L AC+H GLVE+G YF M Y I
Sbjct: 335 GLAFHGQAEQSVQFFNKMLDEGLCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIE 394
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P HY C+VD+L R+G L EA V M E VIW LLG+CR++ +V L +LA ER
Sbjct: 395 PNARHYSCIVDMLGRSGLLDEAFAIVSSMRCEPAVVIWRTLLGACRIHGDVALGKLARER 454
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
L ++ ++V+LS IY W V ++ +M + G +K+ G + +E
Sbjct: 455 LLKMNEDASGDYVLLSGIYASCDEWFGVETVRGSMDERGIRKVAGYAQVE 504
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 271/478 (56%), Gaps = 48/478 (10%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK--VFGEMDE 163
+L C + +++ +H +++NG +V T LI + + +Y VFG+++
Sbjct: 48 ILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 164 RNVVVWTSMINGY----------------------------------------ISCGDIV 183
N +WT+MI GY + G V
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A+ + D+ + N+++ Y+ + ARK+FD+M ++DV+SW ++ YA GD
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E LF+++P +++ +W ++ GYA NG E L+ F++M G + ++ T+ V+S
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVG-METDEVTLAGVIS 283
Query: 304 ACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
ACA+LGA+ + W+ AE +G+ GNV VG+ALIDMY+KCG + A VF M +++
Sbjct: 284 ACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNV 343
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+++++I G AMHGR AL LFH+M P+ +TFIGIL AC+H GLVE+G F
Sbjct: 344 FSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAK 403
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M + + P +HY CMVDLL RAG L EA+D VK MP+E + +W LLG+CR++ N +
Sbjct: 404 MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPD 463
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+A++A L +LEP N+++LSNIY GRW++V++++ +R+ GFKK PGCS E
Sbjct: 464 IAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 51/407 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFNG 74
+ Q+ ++ +GL + Y+ ++I ++ +Y +F ++ N W AM G
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 116
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNGFRA 133
YA +T+M++ P FTF + K+C + G+++H +L GF +
Sbjct: 117 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 176
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+++VG ++I+LY + A KVF EM ER+VV WT +I Y GD+ SA LF+ P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQM------------------------------ 223
+D++ W +V+GY EA + F +M
Sbjct: 237 SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 224 -----------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
P +V+ + ++ Y+ G +E ++FE M ERNVFS++ +I GYA +
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G L F ML + + PN T + +LSAC+ G ++ + ++A+ + G
Sbjct: 357 GRAHSALQLFHDML-KTEIRPNKVTFIGILSACSHAGLVEQGR--QLFAKMEKFFGVAPS 413
Query: 333 GN---ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ ++D+ + G +E A+D+ +M + + W ++ +HG
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 18/255 (7%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD--VFNS 355
++++L C + K VH + NG V LI M K + + VF
Sbjct: 45 LMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
++ + W +I G A+ G + + + + M+ G P TF + AC ++ G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
+ + M+DL + G L A M E D V W L+ +
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYA 220
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
Y ++E A + +L K+ + + Y GR K+ M+D G
Sbjct: 221 KYGDMESASGLFD---DLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVG------- 270
Query: 536 SSIEVNEVVMLGCLS 550
+E +EV + G +S
Sbjct: 271 --METDEVTLAGVIS 283
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 278/507 (54%), Gaps = 64/507 (12%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y ++ A+L + ARK+FD++ +++VVSWN + YA+ + L+ ++L
Sbjct: 130 YSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRL 189
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D N F+F VL CVK+ L+ +++H VL GF +N+
Sbjct: 190 DMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNL------------------- 230
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
V+ +S+++ Y CG++ RC
Sbjct: 231 ------------VLSSSIVDAYAKCGEM---RC--------------------------- 248
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
AR LFD+M KD+ +W T++SGYA GD+ LF +MPE+N SW+ LI GYA N L
Sbjct: 249 -ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSL 307
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E LD F +M+ G + P T + L ACA + AL K VH Y ++ N V +
Sbjct: 308 GHEALDYFTKMMKFG-INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LIDMY+KCG++E + VF+ M K D++ WNT+IS LA +G G A+ +F++M +G
Sbjct: 367 SLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLK 426
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITFI IL AC+H GLV+EGL +F++M D+ + P EHY C++DLL RAG E V+
Sbjct: 427 PDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVN 486
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
++ M + D +W+ LLG CR++ N+EL ER+ EL+P++ A +V L+++Y LG+
Sbjct: 487 ELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGK 546
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEV 540
W+ V +++ M + +K G S I+V
Sbjct: 547 WESVEKVRELMDEKFIRKERGISWIDV 573
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 179/416 (43%), Gaps = 49/416 (11%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI---------NGYISCGDIVS 184
++ + +L++L S G+ EA + +R V + T + Y G V
Sbjct: 27 SLCIAQSLLDLSSQGRLPEA-LSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVH 85
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
I+ N ++ Y + +EARK+FD+M +++ SWN ML+GYA GDV
Sbjct: 86 LHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDV 145
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK--RMLTEGRVFPNDATIVTVL 302
++LF+ M E++V SWN ++ YA G F E + ++ R L G N + VL
Sbjct: 146 NNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGF---NAFSFAGVL 202
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
C +L L +K VH G+ N+ + ++++D YAKCG + A +F+ M KD+
Sbjct: 203 ILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIH 262
Query: 363 TWNTIISGLAMHGRGAGALSLFHEM--KNA-----------------------------G 391
W TI+SG A G A LFH+M KN G
Sbjct: 263 AWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG 322
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ TF LCAC + ++ G + Y I ++D+ ++ G L +
Sbjct: 323 INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSKCGMLEAS 381
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLS 505
M + D V+W ++ + + E A + E L+P V+LS
Sbjct: 382 CCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 218/333 (65%), Gaps = 1/333 (0%)
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ +A L D ++NT+++ +A G V + + LF+EMPERN SW+ ++ GY
Sbjct: 143 RLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQ 202
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
G E L F +M +G V P+D +V VL+ACA+LGAL+ KWVH Y + N + V
Sbjct: 203 AGDGREALGVFSQMQAQG-VRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVF 261
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+G AL+DMYAKCG ++ ++VF M K+++ W T+I GLAMHGRG+ +L+LF +M+++G
Sbjct: 262 LGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG 321
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD I FIG LCACTH GLV++G F SM +Y I P+IEHYGCMVDLLAR G L+EA
Sbjct: 322 VKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEA 381
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
D V++MP++ DA+IW L+ CR +KNVELAE ++ ELEP +V+L NIY
Sbjct: 382 RDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSAS 441
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GR I+ MR+ G +K PGCS++E+ V+
Sbjct: 442 GRHASAREIRNLMREKGVEKTPGCSNVEIKGVI 474
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 22/245 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ ++ AR +FD++ ++N VSW+AM NGY Q R + +F+QM+ P+
Sbjct: 165 LITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPD 224
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
VL +C ++ AL +G+ +H + N R +F+GTAL+++Y+ ++ +VF
Sbjct: 225 DTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFE 284
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIV----SGYID 209
M ++NV+ WT+MI G G + LF + P+ D+ + +G +D
Sbjct: 285 GMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPD-DIAFIGALCACTHTGLVD 343
Query: 210 VRNMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWN 263
+ R+LF+ M K + + M+ A NG + E + + E+MP + + W
Sbjct: 344 -----KGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWG 398
Query: 264 GLIGG 268
L+ G
Sbjct: 399 ALMAG 403
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 150/357 (42%), Gaps = 57/357 (15%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL----HC 124
+A+ +A + + + L+ + + P T P +LKS A+ L H
Sbjct: 57 DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116
Query: 125 LVLKNGFRANIFVGTALIELYS--TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
++ G + V ALI +++ G+ + A+ + + + ++I + G +
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGR-LADAHLLLRTSAAVDASTFNTLITAHARAGRV 175
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----- 237
AR LF+ PER+ + W+ +V+GY+ + EA +F QM + V +T+L G
Sbjct: 176 ADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAAC 235
Query: 238 ----------------------------------YANNGDVEECKRLFEEMPERNVFSWN 263
YA G+V+ +FE M ++NV +W
Sbjct: 236 AQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWT 295
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVH 318
+I G A +G + L F +M + G V P+D + L AC G +D F+ V+
Sbjct: 296 TMIKGLAMHGRGSDSLTLFSQMESSG-VKPDDIAFIGALCACTHTGLVDKGRELFNSMVN 354
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
Y G + + ++D+ A+ G++ A D+ M K D + W +++G H
Sbjct: 355 NY----GIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFH 407
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 289/542 (53%), Gaps = 66/542 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLK---QMTYARKMFDKITDQNVVSWNAMFNG 74
L QI Q++ + L + R+I C+ + YA +F +I N + A+ G
Sbjct: 22 LRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKG 81
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
++ ++L+ +M L CL +G
Sbjct: 82 FSDTSNPVESLILYARM------------------------------LSCLNYSSGVE-- 109
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+S ++A K+ + R V G ++ F
Sbjct: 110 ----------FSIPSVLKACGKLLAFDEGRQV------------HGQVLKTHLWF----- 142
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
D + N++V YID + AR++FD+MP +DV+SWN+M++GY G++E K++FE M
Sbjct: 143 -DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETM 201
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+++V +W +I Y N + LD F+ ML+ G + P+ IV+VLSA A LG ++
Sbjct: 202 SDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLG-LRPDGPAIVSVLSAIADLGFVEEG 260
Query: 315 KWVHVYAEYNGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLA 372
KW+H Y N + + +G+ALIDMY+KCG IENA VF S+ +++ WN++ISGLA
Sbjct: 261 KWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLA 320
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG AL +F EM+ P+ ITF+G+L C+H GLVEEG YF+SM Y IVP+I
Sbjct: 321 IHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRI 380
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HYGCM+DL RAGRL +A+ ++ MP EAD + W +L + + ++E+ + A R E
Sbjct: 381 QHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIE 440
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRE 552
L P + +++V+LSNIY GRW DVA+I++ MR G KK+ GCSS+ VN V L +E
Sbjct: 441 LAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKE 500
Query: 553 LD 554
LD
Sbjct: 501 LD 502
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 260/471 (55%), Gaps = 68/471 (14%)
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN + L+ +M+ +P+ TFP +L+S IN G +LH +L G + F
Sbjct: 40 QNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQS---INTPHRGRQLHAQILLLGLANDPF 96
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V T S+IN Y SCG AR
Sbjct: 97 VQT-------------------------------SLINMYSSCGTPTFAR---------- 115
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ FD++ + D+ SWN ++ A G + ++LF++MPE
Sbjct: 116 ---------------------QAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPE 154
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLT-EG-RVFPNDATIVTVLSACARLGALDFS 314
+NV SW+ +I GY + G + L F+ + T EG ++ PN+ T+ +VLSACARLGAL
Sbjct: 155 KNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHG 214
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAM 373
KWVH Y + G + +V +G +LIDMYAKCG IE A +F+++ KD++ W+ +I+ +M
Sbjct: 215 KWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSM 274
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG L LF M N G P+ +TF+ +LCAC H GLV EG YF+ M +Y + P I+
Sbjct: 275 HGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQ 334
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HYGCMVDL +RAGR+ +A + VK MP+E D +IW LL R++ +VE E+A+ +L EL
Sbjct: 335 HYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLEL 394
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+P N + +V+LSN+Y LGRW++V ++ M G KKLPGCS +EV+ V+
Sbjct: 395 DPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVI 445
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 129/250 (51%), Gaps = 18/250 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--- 96
II A A+ + ARK+FD++ ++NV+SW+ M +GY ++ + LF ++ L+
Sbjct: 132 IIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQL 191
Query: 97 MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
PN FT VL +C ++ AL+ G+ +H + K G + ++ +GT+LI++Y+ +IE A
Sbjct: 192 RPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKC 251
Query: 157 VFGEM-DERNVVVWTSMINGYISCGDIVSARCLFELAP------ERDVILWNTIVSGYID 209
+F + E++V+ W++MI + G +S CL A + + + ++ +
Sbjct: 252 IFDNLGPEKDVMAWSAMITAFSMHG--LSEECLELFARMVNDGVRPNAVTFVAVLCACVH 309
Query: 210 VRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWN 263
+ E + F +M + +S + M+ Y+ G +E+ + + MP E +V W
Sbjct: 310 GGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWG 369
Query: 264 GLIGGYANNG 273
L+ G +G
Sbjct: 370 ALLNGARIHG 379
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 14/228 (6%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI-TDQNVVSWN 69
+L +H + + +G++ + +I A+ + A+ +FD + +++V++W+
Sbjct: 207 RLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWS 266
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM ++ + + LF +M PN TF VL +CV + EG E ++
Sbjct: 267 AMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNE 326
Query: 130 -GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----V 183
G I +++LYS IE A+ V M E +V++W +++NG GD+ +
Sbjct: 327 YGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEI 386
Query: 184 SARCLFELAPERD---VILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
+ L EL P V+L N Y + E R L D M + +
Sbjct: 387 AITKLLELDPANSSAYVLLSNV----YAKLGRWREVRHLRDLMEVRGI 430
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 95/258 (36%), Gaps = 49/258 (18%)
Query: 255 PERNVFSWNGLIGGYA----NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
P F WN LI N F L + RM V P+ T +L + +
Sbjct: 20 PNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHA-VLPDLHTFPFLLQS---INT 75
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC--------------------------- 343
+ +H G + V +LI+MY+ C
Sbjct: 76 PHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHA 135
Query: 344 ----GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN---AGEMPDG 396
G+I A +F+ M K++I+W+ +I G G ALSLF ++ + P+
Sbjct: 136 NAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNE 195
Query: 397 ITFIGILCACTHMGLVEEG---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
T +L AC +G ++ G +Y M +V ++D+ A+ G + A
Sbjct: 196 FTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTS----LIDMYAKCGSIERAKC 251
Query: 454 FVKRMPIEADAVIWANLL 471
+ E D + W+ ++
Sbjct: 252 IFDNLGPEKDVMAWSAMI 269
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 289/540 (53%), Gaps = 44/540 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGL--EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
+ + +H+ Q+ + G + S+ +A A + +A +FD+I +
Sbjct: 16 RRCRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFM 75
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM----KKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+N + G A R V L+T+M P+ TFP VL++C + A G ++H
Sbjct: 76 YNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVH 135
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K G ++ FV ALI +++ SCG++
Sbjct: 136 AHVVKAGCESDAFVKNALIGMHA-------------------------------SCGNLG 164
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A LF+ D + W+ +++G ++ AR LFD+ P KD++SWN M++ YA GD
Sbjct: 165 IAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGD 224
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ + LF+++PER+V SWN +I GY G L+ F++M G P+ T++++LS
Sbjct: 225 MALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK-PDIVTMLSLLS 283
Query: 304 ACARLGALDFSKWVHVYAE----YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
ACA G LD + +H NG+ V +GNALIDMYAKCG +++A +VF SM K
Sbjct: 284 ACADSGDLDVGQRLHSSLSDMFSRNGFP--VVLGNALIDMYAKCGSMKSAHEVFWSMRDK 341
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ TWN+I+ GLA+HG ++ +F +M PD ITF+ +L AC+H G+V++G +F
Sbjct: 342 DVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFF 401
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
M Y + P I+HYGCMVD+L RAG L EA +F+ M E ++VIW LL +CRV+
Sbjct: 402 NLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGE 461
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ELA+ A +L + ++V+LSNIY +G W +++ M D+G K G + ++
Sbjct: 462 IELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVD 521
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 279/512 (54%), Gaps = 40/512 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + A+ V+ ++ ++ + + FT+P VL++ + EG + H +K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GFR + + G++L+E+Y+ ++ A KVF EM R +V+W M+ YI CG +A L
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVAL 137
Query: 189 FE------LAPER--------------------------------DVILWNTIVSGYIDV 210
E + P+R ++ + N ++ Y
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDMYTKN 197
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ EA KLF+QMP +++ISW ++SGY G +++ + LF + E+++ W +I
Sbjct: 198 DCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACV 257
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G F E L F+ M + RV P+ T+VT+L+ CA LGALD +W+H YAE + +
Sbjct: 258 QHGCFEEALTLFRDMQMQ-RVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDA 316
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+G ALIDMY+KCG IE +++VF M +D W II GLA +G+ AL LF +M+ +
Sbjct: 317 VLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRS 376
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PDG+TFIG+L AC H GLV+EG F +M Y I P++EHY C+V+LL RAG L E
Sbjct: 377 KVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDE 436
Query: 451 AVDFVKRMPIEADAV-IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
A + +PI DA+ ++ LL +C+ + NVE++E +R+ E + + +++SN+Y
Sbjct: 437 AERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYA 496
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW+DV R++ M KK GCS IEV
Sbjct: 497 TASRWEDVIRVRGKMAHPTVKKTAGCSLIEVK 528
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 42/364 (11%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
+ +G Y ++ L ++ ARK+FD++ + +V WN M Y + + V
Sbjct: 76 IKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAV 135
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
L QM++ P+ T + +C + L G +H + + N F N+ V AL+++Y
Sbjct: 136 ALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIH-VYMDNVFGFNLPVANALLDMY 194
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ +E A K+F +M RN++ WT +++GY G + AR LF E+D+ILW +++
Sbjct: 195 TKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMIN 254
Query: 206 GYIDVRNMIEARKLFDQMP---------------------------------------KK 226
+ EA LF M K
Sbjct: 255 ACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKI 314
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D + ++ Y+ G +E+ +F M R+ +W +I G A NG L+ F+ M
Sbjct: 315 DAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDM- 373
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
+V P+ T + VLSAC G +D K H E + V + L+++ + G+
Sbjct: 374 QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGL 433
Query: 346 IENA 349
++ A
Sbjct: 434 LDEA 437
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
Q+ AR +F++ +++++ W AM N Q+ + LF M+ P+ FT +L
Sbjct: 230 QLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLT 289
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
C + AL +GE +H + + + +GTALI++YS IE + +VF M R+
Sbjct: 290 CCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATA 349
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYIDVRNMIEARKL 219
WT++I G + G A LF+ V +L G +D E RK
Sbjct: 350 WTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVD-----EGRKQ 404
Query: 220 FDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
F M + V ++ +++ G ++E +RL ++P
Sbjct: 405 FHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVP 445
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 285/535 (53%), Gaps = 30/535 (5%)
Query: 24 QVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
V+ SG ++ Y+ I+ A+ + +ARK+FD++ D+ V WN M +GY +
Sbjct: 124 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 183
Query: 84 VVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
LF M + N T+ ++ K L+ + ++ A++
Sbjct: 184 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTAR----MYFDKMPERSVVSWNAMLS 239
Query: 144 LYSTGKAIEAAYKVFGEM-----DERNVVVWTSMINGYISCGDIVSARCLFELAPER--- 195
Y+ G A E ++F +M + + W ++I+ S GD CL E +
Sbjct: 240 GYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD----PCLSESIVRKLDD 295
Query: 196 ------DVILWNTIVSGYIDVRNMIEARKLFDQM---PKKDVISWNTMLSGYANNGDVEE 246
+ + ++ + N+ A K+F+Q+ + + WN M+S YA GD+
Sbjct: 296 TVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPS 355
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LF++MP+R+ SWN +I GY NG + + F+ M++ P++ T+V+V SAC
Sbjct: 356 ARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACG 415
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
LG L W + N Q ++ V N+LI MY++CG +++AV +F M T+DL+++NT
Sbjct: 416 HLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNT 475
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISG A HG G ++ L +MK G PD IT+I IL AC+H GL+ EG F+S+
Sbjct: 476 LISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIKF-- 533
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
P ++HY CM+D+L RAGRL EA+ ++ MP+E A I+ +LL + ++K VEL ELA
Sbjct: 534 ---PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELA 590
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+L ++EP N N+V+LSNIY GRWKD +++ MR G KK G S +E N
Sbjct: 591 AAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEHN 645
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 298/553 (53%), Gaps = 22/553 (3%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NV 65
AH + L K +H + ++ +G S +I ++ QM +A +F T + NV
Sbjct: 48 AHHKNLSKGKEIH---SYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINV 104
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
++NA+ +G+ N F + +M+ +P+ FTFP +K+C+ + E +++H L
Sbjct: 105 FAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV---LEIKKIHGL 161
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+ K G ++F+G+AL+ Y +E A F E+ R+VV+W +M+NGY G
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 186 RCLFELAPERDVILWNTIVSGYIDV----RNMIEARKLFDQMPK----KDVISWNTMLSG 237
F + V+ V+G + V ++ R + K V N+++
Sbjct: 222 LETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDM 281
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y +E+ +FE M E+++FSWN ++ + G L RML G + P+ T
Sbjct: 282 YGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG-IQPDLVT 340
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQ------GNVCVGNALIDMYAKCGIIENAVD 351
+ TVL AC+ L AL + +H Y +G +V + NA+IDMYAKCG + +A
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF M KD+ +WN +I G MHG G AL +F M PD +TF+G+L AC+H G
Sbjct: 401 VFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGF 460
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
V +G ++ M Y + P IEHY C++D+L RAG+L EA + MPIEA+ V+W LL
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
+CR++K+ LAE+A +R+ ELEP++ ++V++SN+YG +GR+++V ++ MR +K
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 532 LPGCSSIEVNEVV 544
PGCS IE+ V
Sbjct: 581 TPGCSWIELKNGV 593
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
N T + L A A L K +H Y NG+ + +LI+MY+KC + A+ +F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 354 NSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
+ + ++ +N IISG +G + +M+N G +PD TF + AC + +
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI 155
Query: 413 EE--GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
++ GL + + +D I +V+ + G + A + +PI D V+W +
Sbjct: 156 KKIHGLLFKFGLELDVFI------GSALVNCYLKFGLMEHAQVAFEELPIR-DVVLWNAM 208
Query: 471 LGSCRVYKNVELAELALERLTELEPKN--PANFVM 503
+ Y + E+ LE + ++ P+ F +
Sbjct: 209 VNG---YAQIGQFEMVLETFRRMNDESVVPSRFTV 240
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 277/530 (52%), Gaps = 40/530 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVSWNAMFNGYAQ 77
Q+ Q++ GL +T A YAR +FD + NV W A + YA+
Sbjct: 26 QLHAQLLLRGLPLPARAA---VTLIASSSSPQYARAIFDSVPAASANVYLWTATVSSYAK 82
Query: 78 NE---FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ LF M + PN FT VLKS K+ A + ++H ++K G ++
Sbjct: 83 HASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGLASS 142
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ VG L++ Y ++ A +VF EM P
Sbjct: 143 LHVGATLLDSYGNLCRVKDARRVFDEM-------------------------------PR 171
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+V++ N +VSGY+ ++ AR++FD M ++D ISWNT++SGY GD + LF+EM
Sbjct: 172 SNVVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEM 231
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P+RNV SWN +I + GL+ + + F +M P+ AT+ ++SACA+LG L +
Sbjct: 232 PQRNVNSWNMMISACSEVGLWADSVAVFNQMRFMS-FRPDAATMAVLMSACAQLGFLSVA 290
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ V+ + N V N+L+DM+AKCG A +F MD KD++++N ++S LA H
Sbjct: 291 RQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHH 350
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G G AL LF +M G PD +TF+G+L AC H GLV+ G YF++M Y+I +H
Sbjct: 351 GHGKDALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADH 410
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
Y CMVDL R G + EA FVK MP++ A IW LL +CR + N+++ E+A L +E
Sbjct: 411 YACMVDLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIE 470
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
P NP N+V+LSN +W V ++ MR G K G S +EV VV
Sbjct: 471 PMNPGNYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEVESVV 520
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 285/532 (53%), Gaps = 13/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I +++ S Y+ ++ ++ AR +FD + +++V+SWN M +GY +N +
Sbjct: 139 IHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+++F M P+ T +L C + L G +H LV + I V A
Sbjct: 199 MNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERD 196
L+ +Y ++ A VFG M+ R+V+ WT MINGYI GD+ +A L L +
Sbjct: 259 LVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPN 318
Query: 197 VILWNTIVSGYIDVRNMIEARKL----FDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ ++VS D + + + L Q D+I +++S YA ++ C R+F
Sbjct: 319 AVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFS 378
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ W+ +I G N L + LD FKRM E V PN AT+ ++L A A L L
Sbjct: 379 GASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRRED-VEPNIATLNSLLPAYATLADLR 437
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD----TKDLITWNTII 368
+ +H Y G+ ++ L+ +Y+KCG +E+A +FN + +KD++ W +I
Sbjct: 438 QTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SG MHG G AL +F EM +G P+ ITF L AC+H GLVEEGL+ F M Y
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKT 557
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
+ + HY C+VDLL RAGRL EA + + +P E + IW LL +C ++NV+L E+A
Sbjct: 558 LARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAAN 617
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+L ELEP+N N+V+L+NIY LGRWKD+ +++ M + G +K PG S+IE+
Sbjct: 618 KLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 227/483 (46%), Gaps = 29/483 (6%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A ++ + TK LH V+T G S +I + A + YARK+FD++ +++
Sbjct: 26 AATQSISKTKALH---CHVITGG-RVSGHILSTLSVTYALCGHIAYARKLFDEMPQSSLL 81
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
S+N + Y ++ + + +F +M + + +P+ +T+P V K+ ++ ++ G +H
Sbjct: 82 SYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHG 141
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+L++ F + +V AL+ +Y +E A VF M R+V+ W +MI+GY G +
Sbjct: 142 RILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 185 ARCLFE------LAPERDVILWNTIVSGYI-------DVRNMIEARKLFDQMPKKDVISW 231
A +F+ + P+ I+ V G++ +V ++E ++L D++ K
Sbjct: 202 ALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVK----- 256
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +++ Y G ++E + +F M R+V +W +I GY +G L+ + M EG V
Sbjct: 257 NALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEG-V 315
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
PN TI +++SAC L+ K +H +A ++ + +LI MYAKC I+
Sbjct: 316 RPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFR 375
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ W+ II+G + AL LF M+ P+ T +L A +
Sbjct: 376 VFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLAD 435
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA---VDFVKRMPIEADAVIWA 468
+ + ++ + ++ +V + ++ G L A + ++ D V+W
Sbjct: 436 LRQTMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 469 NLL 471
L+
Sbjct: 495 ALI 497
>gi|115479089|ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51091564|dbj|BAD36301.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631371|dbj|BAF25052.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|215740507|dbj|BAG97163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 612
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 244/394 (61%), Gaps = 2/394 (0%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ AA ++F EM ER+VV + SM+ GY++ GD+ AR LF+ RDV+ WN+++SGY
Sbjct: 173 LPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARRDVVTWNSMISGYSRH 232
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M ARK+FD MP++DV+SWN+ML GYA GDVE + +F+ MP+R++ SWN ++ YA
Sbjct: 233 GDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPKRSIVSWNVILALYA 292
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH--VYAEYNGYQG 328
+ E L F M+ EG PN+ T V+VL+ACA LG L+ +WVH V ++
Sbjct: 293 KLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHDLVQERWDRLVP 352
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+V + L+ MYAKCG++E A ++FNSM K + +WN++I G +HG+ AL LF EM+
Sbjct: 353 DVLLLTTLLTMYAKCGVMETAREIFNSMGEKSVPSWNSMIIGYGLHGQSEKALELFLEME 412
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G P+ TFI +L +C H GLV EG F M YSI P+ EH+GCM+DLL RAG L
Sbjct: 413 RDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFGCMMDLLGRAGLL 472
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
++ + ++ + + +W L+ + + N++L E ++L E+ P +++LSNIY
Sbjct: 473 EQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMRPTEVGPYILLSNIY 532
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
GRW DV +++ M + G +K G S + E
Sbjct: 533 AAEGRWDDVEKVRKVMEEKGVEKDAGLSLVGSRE 566
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 156/368 (42%), Gaps = 93/368 (25%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ AC +L + AR++FD++ +++VVS+N+M GY LF M + D
Sbjct: 163 LLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARRD---- 218
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ ++I YS +E A K+F
Sbjct: 219 -----------------------------------VVTWNSMISGYSRHGDMENARKMFD 243
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M ER+VV W SM++GY GD+ AR +F+ P+R ++ WN I++ Y +R+ E L
Sbjct: 244 AMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPKRSIVSWNVILALYAKLRDWRECLGL 303
Query: 220 FDQM-------P-KKDVIS------------------------WNTMLSG---------- 237
FD M P +K +S W+ ++
Sbjct: 304 FDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHDLVQERWDRLVPDVLLLTTLLTM 363
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA G +E + +F M E++V SWN +I GY +G + L+ F M +G PN+ T
Sbjct: 364 YAKCGVMETAREIFNSMGEKSVPSWNSMIIGYGLHGQSEKALELFLEMERDG-PRPNETT 422
Query: 298 IVTVLSACARLGALDFSKW------VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
+ VLS+CA G L W V Y+ + C ++D+ + G++E + +
Sbjct: 423 FICVLSSCAH-GGLVLEGWWCFDRMVRFYSIEPKSEHFGC----MMDLLGRAGLLEQSEN 477
Query: 352 VFNSMDTK 359
+ ++ K
Sbjct: 478 LIENLQGK 485
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
N L+ + G++ A +F+ M +D++++N++++G G AGA +LF M
Sbjct: 161 NTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARR--- 217
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
D +T+ ++ + G +E F +M + +V + M+D A+AG + A
Sbjct: 218 -DVVTWNSMISGYSRHGDMENARKMFDAMP-ERDVV----SWNSMLDGYAQAGDVEMARL 271
Query: 454 FVKRMP 459
MP
Sbjct: 272 VFDGMP 277
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 293/547 (53%), Gaps = 42/547 (7%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
++I C + A +FDKI + ++ +W + +G+ Q+ F + + +++ + + P
Sbjct: 16 KLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRP 75
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ F V K+C L +++H ++ GF ++ +G ALI+++ K + A VF
Sbjct: 76 DKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVF 135
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFE----------------LAP--------- 193
+M ++VV WTSM Y++CG LF + P
Sbjct: 136 DDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLG 195
Query: 194 ------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
E +V + + +V+ Y + +AR +FD M +D++SWN ML+ Y N
Sbjct: 196 REVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLN 255
Query: 242 GDVEECKRLFEEMPER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
+ E LF +M + N SWN I G NG L +M G + PN T
Sbjct: 256 KEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSG-IKPNRIT 314
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
IV+ L C L +L K +H Y + + +V + AL+ +YAKCG +E + VFN+M
Sbjct: 315 IVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMP 374
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
KD++ WNT+I +MHG+G +L LF++M ++G P+ +TFIG+L C+H L +EGL
Sbjct: 375 RKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLL 434
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
F SM+ ++SI P +HY CMVD+L+RAGRL EA DF+++MPIE A W LLG+CRVY
Sbjct: 435 VFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVY 494
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
KNVEL LA +L E+EP N N+V+LSNI +W + + I+ MRD G K PG S
Sbjct: 495 KNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSW 554
Query: 538 IEVNEVV 544
++V V
Sbjct: 555 VQVKNKV 561
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 160/398 (40%), Gaps = 58/398 (14%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S L K +H Q G K + +I + K + AR +FD + ++VV
Sbjct: 88 AASGDLVVAKKIHDDAIQF---GFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW +M Y R ++LF +M N T +L +C + ++ G E+H +
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREVHGFI 202
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
L+N N++V +AL+ +Y++ ++ A VF M R++V W M+ Y +
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262
Query: 187 CLFELAPERDVIL----WN--------------------------------TIVSGYIDV 210
LF + + L WN TIVS
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGC 322
Query: 211 RNMIEARK-------LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
N+ R +F +DV ++ YA GD+E + +F MP ++V +WN
Sbjct: 323 TNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWN 382
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC-----ARLGALDFSKWVH 318
+I + +G E L F +ML G V PN T + VLS C A G L F+
Sbjct: 383 TMIMANSMHGKGGESLILFNKMLDSG-VEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSS 441
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
++ C ++D+ ++ G +E A D M
Sbjct: 442 EHSITPDADHYSC----MVDVLSRAGRLEEAYDFIRKM 475
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 44/280 (15%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ ++ + +E + Y++ ++ A + AR +FD + +++VSWN M Y N+
Sbjct: 197 EVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNK 256
Query: 80 FHRTVVVLFTQMKK-----------------------------LDAM------PNCFTFP 104
+ + LF QM+K L M PN T
Sbjct: 257 EYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIV 316
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
L C + +LR G+E+H V ++ F ++ + TAL+ LY+ +E + VF M +
Sbjct: 317 SALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRK 376
Query: 165 NVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
+VV W +MI G + LF + E + + + ++SG + E +F
Sbjct: 377 DVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVF 436
Query: 221 DQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP 255
+ M + I+ ++ M+ + G +EE +MP
Sbjct: 437 NSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMP 476
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
C LI G ++ A+ +F+ + DL TW +ISG HG A+ ++ + +
Sbjct: 12 CQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSR 71
Query: 391 GEMPDGITFIGILCACTHMG 410
PD + + AC G
Sbjct: 72 NVRPDKFVLLSVAKACAASG 91
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 258/451 (57%), Gaps = 10/451 (2%)
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ TFPI LKS ++ + LR GE+LH LK N V T+L+ LY+ + A +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRN 212
VF EM + V WT++I Y+ GD+ A R F D +++ V +
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 213 MIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ ++ + + V + Y G++ + + +F++M +++ +W ++GG
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
YA+NG E LD F M EG V P+ + LSAC RLGALD + +++ +
Sbjct: 295 YASNGHPREALDLFLAMQAEG-VRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 353
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
N +G ALIDMYAKCG A VF M KD+I WN +I GL M G A +L +M+
Sbjct: 354 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQME 413
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+G + TFIG+LC+CTH GL+++G YF +M Y I P+IEHYGC+VDLL+RAG L
Sbjct: 414 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLL 473
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + MP+ A+AVI LLG C++++N ELAE L +L LEP N N+VMLSNIY
Sbjct: 474 QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIY 533
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRW+D A++++ M++ G +K+P CS +E
Sbjct: 534 SNRGRWEDAAKLRLDMKEKGVEKVPACSWVE 564
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 19/367 (5%)
Query: 24 QVVTSGLEKSDYITPRIITAC----AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ L+ + P ++T+ A+ + A+++FD++ + VSW A+ Y
Sbjct: 139 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 198
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R V + P+ FT VL +C ++ L GE + + G ++FV T
Sbjct: 199 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 258
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A ++LY + A +VF +M +++ V W +M+ GY S G A LF V
Sbjct: 259 AAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRP 318
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----------YANNGDVEECKR 249
V+G + + A L Q + ++ W+ L YA G E
Sbjct: 319 DCYAVAGALSACTRLGALDLGRQAIR--MVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 376
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F++M ++++ WN +I G G +M G V ND T + +L +C G
Sbjct: 377 VFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG-VKLNDNTFIGLLCSCTHTG 435
Query: 310 AL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTI 367
+ D ++ H + + ++D+ ++ G+++ A + + M + + +
Sbjct: 436 LIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGAL 495
Query: 368 ISGLAMH 374
+ G +H
Sbjct: 496 LGGCKIH 502
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/394 (40%), Positives = 231/394 (58%), Gaps = 1/394 (0%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
I+ A++VF M R+V W +M++G G I A +F P R+ + WN +V+
Sbjct: 88 IDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASS 147
Query: 211 RNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+M A LF P+K D I W M+SGY + G+V++ F MP RN+ SWN ++ GY
Sbjct: 148 GDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGY 207
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
N + L FK M+ + V PN +T+ +VL C+ L AL F + VH + +
Sbjct: 208 VKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRS 267
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ VG +L+ MY KCG +++A +F+ M TKD++ WN +ISG A HG G A+ LF +MK+
Sbjct: 268 ITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKD 327
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G +PD IT + +L AC H GL + G+ F++M Y+I PQ++HY CMVDLL RAG L
Sbjct: 328 EGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLE 387
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
AV+ + MP E + LL +CRVYKN+E AE A +L E +P+N +V L+NIY
Sbjct: 388 RAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYA 447
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
RW DV+R++ M+D K PG S +E+ V
Sbjct: 448 VANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGV 481
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 184/449 (40%), Gaps = 59/449 (13%)
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC---GDIVSARCLFELAP 193
GTA + + + A + F + + ++ GY G + AR LF+ P
Sbjct: 9 TGTAAVAAAVRRRDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIP 68
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
D + +NT++S + ++ A ++F MP +DV SWNTM+SG + NG +EE + +F
Sbjct: 69 HPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRA 128
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP RN SWN ++ A++G + F+ + DA + T
Sbjct: 129 MPARNAVSWNAMVAARASSGDMGAAENLFRNAPEK-----TDAILWT------------- 170
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
A++ Y G ++ A++ F +M ++L++WN +++G
Sbjct: 171 ---------------------AMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVK 209
Query: 374 HGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+ R AL +F M ++A P+ T +L C+++ + G Q M + I
Sbjct: 210 NSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQ-WCMKLPLGRSI 268
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
++ + + G L +A M + D V W ++ + A E++ +
Sbjct: 269 TVGTSLLSMYCKCGDLDDACKLFDEMHTK-DIVAWNAMISGYAQHGGGRKAIKLFEKMKD 327
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG---FKKLPGCSSIEVNEVVMLGCL 549
E P +L+ + A I + D G F+ + +IE +V C+
Sbjct: 328 -EGVVPDWITLLAVL---------TACIHTGLCDFGIQCFETMQEAYNIE-PQVDHYSCM 376
Query: 550 SRELDRKSIVRAEANMIKLLPQNNHPLTF 578
L R ++ NMI +P HP +
Sbjct: 377 VDLLCRAGLLERAVNMIHSMPFEPHPSAY 405
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 150/350 (42%), Gaps = 90/350 (25%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A ++F + ++V SWN M +G ++N
Sbjct: 91 AWRVFSTMPVRDVTSWNTMVSGLSKN---------------------------------- 116
Query: 113 INALREGEELHCLVLKNGFRA----NIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVV 167
A+ E E + FRA N A++ ++ + AA +F E+ + +
Sbjct: 117 -GAIEEAEAM--------FRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAI 167
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
+WT+M++GY+ G++ A F P R+++ WN +V+GY+ +A ++F M +
Sbjct: 168 LWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDA 227
Query: 228 VISWN----------------------------------------TMLSGYANNGDVEEC 247
++ N ++LS Y GD+++
Sbjct: 228 IVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDA 287
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+LF+EM +++ +WN +I GYA +G + + F++M EG V P+ T++ VL+AC
Sbjct: 288 CKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEG-VVPDWITLLAVLTACIH 346
Query: 308 LGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
G DF + E + V + ++D+ + G++E AV++ +SM
Sbjct: 347 TGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSM 396
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM--PNCFTFPI 105
K M Y R M +N+VSWNA+ GY +N + +F M + DA+ PN T
Sbjct: 184 KAMEYFRAM----PVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVE-DAIVQPNPSTLSS 238
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
VL C ++AL G ++H +K +I VGT+L+ +Y ++ A K+F EM ++
Sbjct: 239 VLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKD 298
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVIL-WNTIVS 205
+V W +MI+GY G A LFE + V+ W T+++
Sbjct: 299 IVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLA 339
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 289/545 (53%), Gaps = 15/545 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
Q E + QI VV GL Y+ +++ ++ + A +F + D+ + WN
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM YA+N++ + + LF M++ +P+ FT V+ C + G+ +H + K
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
++ + +AL+ LYS AY VF M+E+++V W S+I+G G A +F
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 190 --------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSG 237
L P+ D++ ++ + + + ++ M K +V ++++
Sbjct: 463 GDMKDDDDSLKPDSDIM--TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G E ++F M N+ +WN +I Y+ N L +D F ML++G +FP+ +
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVS 579
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
I +VL A + +L K +H Y G + + NALIDMY KCG + A ++F M
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K LITWN +I G HG ALSLF EMK AGE PD +TF+ ++ AC H G VEEG +
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKN 699
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
F+ M DY I P +EHY MVDLL RAG L EA F+K MPIEAD+ IW LL + R +
Sbjct: 700 IFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH 759
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
NVEL L+ E+L +EP+ + +V L N+Y + G + A++ M++ G K PGCS
Sbjct: 760 HNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSW 819
Query: 538 IEVNE 542
IEV++
Sbjct: 820 IEVSD 824
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 233/489 (47%), Gaps = 28/489 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK-------ITDQNVVSWNAMFN 73
I VV G +I ++ + + YA ++FD ++ ++V WN+M +
Sbjct: 82 IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR--EGEELHCLVLKNGF 131
GY + + V F +M P+ F+ IV+ K R EG+++H +L+N
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 132 RANIFVGTALIELY-STGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLF 189
+ F+ TALI++Y G +I+ A++VF E+ D+ NVV+W MI G+ G S+ L+
Sbjct: 202 DTDSFLKTALIDMYFKFGLSID-AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANN 241
LA V L +T +G + + E Q+ D ++LS Y+
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G V E + +F + ++ + WN ++ YA N + LD F M + V P+ T+ V
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM-RQKSVLPDSFTLSNV 379
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+S C+ LG ++ K VH Q + +AL+ +Y+KCG +A VF SM+ KD+
Sbjct: 380 ISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFIGILCACTHMGLVEEGLSYF 419
+ W ++ISGL +G+ AL +F +MK+ + PD + AC + + GL
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH 499
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM + +V + ++DL ++ G A+ M E + V W +++ SC Y
Sbjct: 500 GSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SC--YSR 554
Query: 480 VELAELALE 488
L EL+++
Sbjct: 555 NNLPELSID 563
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 212/449 (47%), Gaps = 11/449 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQN 78
QI ++ + L+ ++ +I + A ++F +I D+ NVV WN M G+ +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + L+ K +F L +C + G ++HC V+K G + +V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T+L+ +YS + A VF + ++ + +W +M+ Y SA LF ++ V+
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 199 LWNTIVSGYIDVRNMI----EARKLFDQMPKKDVISWNT----MLSGYANNGDVEECKRL 250
+ +S I +++ + + ++ K+ + S +T +L+ Y+ G + +
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT-VLSACARLG 309
F+ M E+++ +W LI G NG F E L F M + D+ I+T V +ACA L
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL F VH G NV VG++LID+Y+KCG+ E A+ VF SM T++++ WN++IS
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ + ++ LF+ M + G PD ++ +L A + + +G S + I
Sbjct: 551 CYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-LHGYTLRLGIP 609
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
++D+ + G A + K+M
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 173/395 (43%), Gaps = 24/395 (6%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF-- 158
FTFP +LK+C + L G+ +H V+ G+R + F+ T+L+ +Y ++ A +VF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 159 -----GEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYID 209
+ R+V VW SMI+GY R + D + +VS
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 210 VRNMI--EARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSW 262
N E +++ M + D ++ Y G + R+F E+ ++ NV W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT-VLSACARLGALDFSKWVHVYA 321
N +I G+ +G+ LD + ML + +T T L AC++ F + +H
Sbjct: 241 NVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G + V +L+ MY+KCG++ A VF+ + K L WN +++ A + G AL
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M+ +PD T ++ C+ +GL G S + I ++ L
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL-FKRPIQSTSTIESALLTL 417
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLL-GSCR 475
++ G +A K M E D V W +L+ G C+
Sbjct: 418 YSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCK 451
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
S N I G + + L + + + + T ++L AC+ L L + K +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN-------SMDTKDLITWNTIISGLAM 373
G++ + + +L++MY KCG ++ AV VF+ + +D+ WN++I G
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITF---IGILC 404
R + F M G PD + + ++C
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 295/530 (55%), Gaps = 9/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+ SG E + ++ ++ + YARK+F+ + + V+WN + GY QN
Sbjct: 234 QLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNG 293
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F LF M P+ TF L S ++ +LR +E+H ++++ ++++ +
Sbjct: 294 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 353
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPER 195
ALI++Y G +E A K+F + +V V T+MI+GY+ G + A R L +
Sbjct: 354 ALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVT 413
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK---DVISWNTMLSG-YANNGDVEECKRLF 251
+ + +++ V + ++L + KK ++++ + ++ YA G ++ F
Sbjct: 414 NSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFF 473
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
M +R+ WN +I ++ NG +D F++M G F + ++ + LSA A L AL
Sbjct: 474 RRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKF-DSVSLSSALSAAANLPAL 532
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H Y N + + V + LIDMY+KCG + A VFN MD K+ ++WN+II+
Sbjct: 533 YYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAY 592
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG L L+HEM AG PD +TF+ I+ AC H GLV+EG+ YF M +Y I +
Sbjct: 593 GNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGAR 652
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY CMVDL RAGR+ EA D +K MP DA +W LLG+CR++ NVELA+LA L
Sbjct: 653 MEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLL 712
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+PKN +V+LSN++ D G W V +++ M++ G +K+PG S I+VN
Sbjct: 713 ELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVN 762
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 208/493 (42%), Gaps = 73/493 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ TQV+ G+ + R++ + A +F ++ + + WN M G
Sbjct: 32 QVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLG 91
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ ++ + +M + P+ +TFP V+K+C +N + +H GF ++F G+
Sbjct: 92 WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGS 151
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI----------------- 182
ALI+LY+ I A +VF E+ R+ ++W M+ GY+ GD
Sbjct: 152 ALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV 211
Query: 183 --VSARCLFELAPER--------------------DVILWNTIVSGYIDVRNMIEARKLF 220
V+ C+ + R D + NT+V+ Y N++ ARKLF
Sbjct: 212 NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLF 271
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ MP+ D ++WN +++GY NG +E LF M
Sbjct: 272 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAM-------------------------- 305
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
V P+ T + L + G+L K VH Y + +V + +ALID+Y
Sbjct: 306 ------ISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVY 359
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
K G +E A +F D+ +ISG +HG A++ F + G + + +T
Sbjct: 360 FKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMA 419
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC + ++ G + + + + D+ A+ GRL A +F +RM
Sbjct: 420 SVLPACAAVAALKPGKE-LHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS- 477
Query: 461 EADAVIWANLLGS 473
+ D+V W +++ S
Sbjct: 478 DRDSVCWNSMISS 490
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 176/353 (49%), Gaps = 9/353 (2%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD++ ++ + WN M GY ++ + F +M+ +M N T+ +L C
Sbjct: 166 ARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICAT 225
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
G +LH LV+ +GF + V L+ +YS + A K+F M + + V W +
Sbjct: 226 RGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGL 285
Query: 173 INGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-- 226
I GY+ G A LF + D + + + + ++ ++ +++ + +
Sbjct: 286 IAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRV 345
Query: 227 --DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKR 284
DV + ++ Y GDVE +++F++ +V +I GY +GL + ++ F+
Sbjct: 346 PFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRW 405
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
++ EG V N T+ +VL ACA + AL K +H + + V VG+A+ DMYAKCG
Sbjct: 406 LIQEGMV-TNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCG 464
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
++ A + F M +D + WN++IS + +G+ A+ LF +M +G D +
Sbjct: 465 RLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 160/403 (39%), Gaps = 73/403 (18%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ +H ++ + +V + Y+ +I + + ARK+F + +V AM +
Sbjct: 329 SLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMIS 388
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GY + + + F + + + N T VL +C + AL+ G+ELHC +LK
Sbjct: 389 GYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLEN 448
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL-- 191
+ VG+A+ ++Y+ ++ AY+ F M +R+ V W SMI+ + G A LF
Sbjct: 449 IVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMG 508
Query: 192 -------------------------------------APERDVILWNTIVSGYIDVRNMI 214
A D + +T++ Y N+
Sbjct: 509 MSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLA 568
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A +F+ M K+ +SWN++++ Y N+G EC
Sbjct: 569 LAWCVFNLMDGKNEVSWNSIIAAYGNHGCPREC--------------------------- 601
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVG 333
LD + ML G + P+ T + ++SAC G +D + H G +
Sbjct: 602 ----LDLYHEMLRAG-IHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHY 656
Query: 334 NALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
++D+Y + G + A D SM T D W T++ +HG
Sbjct: 657 ACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHG 699
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 209 DVRNMIEARKLFDQM---PKKDVISWNTMLSG-YANNGDVEECKRLFEEMPERNVFSWNG 264
D + +AR++ Q+ DV + ++ + G Y G + LF E+ R WN
Sbjct: 23 DASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNW 82
Query: 265 LIGGYANNGLF-FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G G F F +L FK + + V P+ T V+ AC L + VH A
Sbjct: 83 MIRGLYMLGWFDFALLFYFKMLGSN--VSPDKYTFPYVIKACGGLNNVPLCMVVHDTARS 140
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G+ ++ G+ALI +YA G I +A VF+ + +D I WN ++ G G A+
Sbjct: 141 LGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGT 200
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLL 442
F EM+ + M + +T+ IL C G G + + + PQ+ + +V +
Sbjct: 201 FCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVAN--TLVAMY 258
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLL 471
++ G L A MP + D V W L+
Sbjct: 259 SKCGNLLYARKLFNTMP-QTDTVTWNGLI 286
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA-LIDMYAKCGIIENAVDVFNSMDT 358
++ AC+ + ++ VH G G+VC ++ ++ +Y CG +A ++F ++
Sbjct: 16 SLFRACSDASMVQQARQVHTQVIVGG-MGDVCAPSSRVLGLYVLCGRFRDAGNLFFELEL 74
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ + WN +I GL M G AL + +M + PD TF ++ AC + V +
Sbjct: 75 RYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM-V 133
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
A + ++ L A G + +A +P+ D ++W +L
Sbjct: 134 VHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR-DTILWNVML 185
>gi|125605648|gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
Length = 612
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 244/394 (61%), Gaps = 2/394 (0%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
+ AA ++F EM ER+VV + SM+ GY++ GD+ AR LF+ RDV+ WN+++SGY
Sbjct: 173 LPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARRDVVTWNSMISGYSRH 232
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M ARK+FD MP++DV+SWN+ML GYA GDVE + +F+ MP+R++ SWN ++ YA
Sbjct: 233 GDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPKRSIVSWNVILALYA 292
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH--VYAEYNGYQG 328
+ E L F M+ EG PN+ T V+VL+ACA LG L+ +WVH V ++
Sbjct: 293 KLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHDLVQERWDRLVP 352
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+V + L+ MYAKCG++E A ++FNSM K + +WN++I G +HG+ AL LF EM+
Sbjct: 353 DVLLLTTLLTMYAKCGVMETAREIFNSMGEKSVPSWNSMIIGYGLHGQSEKALELFLEME 412
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G P+ TFI +L +C H GLV EG F M YSI P+ EH+GCM+DLL RAG L
Sbjct: 413 RDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFGCMMDLLGRAGLL 472
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
++ + ++ + + +W L+ + + N++L E ++L E+ P +++LSNIY
Sbjct: 473 EQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMRPTEVGPYILLSNIY 532
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
GRW DV +++ M + G +K G S + E
Sbjct: 533 AAEGRWDDVEKVRKVMEEKGVEKDAGLSLVGSRE 566
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 156/368 (42%), Gaps = 93/368 (25%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ AC +L + AR++FD++ +++VVS+N+M GY LF M + D
Sbjct: 163 LLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARRD---- 218
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ ++I YS +E A K+F
Sbjct: 219 -----------------------------------VVTWNSMISGYSRHGDMENARKMFD 243
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M ER+VV W SM++GY GD+ AR +F+ P+R ++ WN I++ Y +R+ E L
Sbjct: 244 AMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPKRSIVSWNVILALYAKLRDWRECLGL 303
Query: 220 FDQM-------P-KKDVIS------------------------WNTMLSG---------- 237
FD M P +K +S W+ ++
Sbjct: 304 FDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHDLVQERWDRLVPDVLLLTTLLTM 363
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA G +E + +F M E++V SWN +I GY +G + L+ F M +G PN+ T
Sbjct: 364 YAKCGVMETAREIFNSMGEKSVPSWNSMIIGYGLHGQSEKALELFLEMERDG-PRPNETT 422
Query: 298 IVTVLSACARLGALDFSKW------VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
+ VLS+CA G L W V Y+ + C ++D+ + G++E + +
Sbjct: 423 FICVLSSCAH-GGLVLEGWWCFDRMVRFYSIEPKSEHFGC----MMDLLGRAGLLEQSEN 477
Query: 352 VFNSMDTK 359
+ ++ K
Sbjct: 478 LIENLQGK 485
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
N L+ + G++ A +F+ M +D++++N++++G G AGA +LF M
Sbjct: 161 NTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARR--- 217
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
D +T+ ++ + G +E F +M + +V + M+D A+AG + A
Sbjct: 218 -DVVTWNSMISGYSRHGDMENARKMFDAMP-ERDVV----SWNSMLDGYAQAGDVEMARL 271
Query: 454 FVKRMP 459
MP
Sbjct: 272 VFDGMP 277
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 270/476 (56%), Gaps = 46/476 (9%)
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL-YSTGKAIEAAYKVFGEMDERNV 166
K+C ++++ +++H ++K G + + ++ S I AY VF ++ N+
Sbjct: 4 KNCT---SMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNL 60
Query: 167 VVWTSMINGYISCGDIVSARCLF------------------------------------- 189
VW ++I G+ +A LF
Sbjct: 61 FVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLH 120
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+L E D + NTI++ Y++ + EA+++FD DV++WNTM+ G A G+++
Sbjct: 121 GRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEID 180
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ +RLF++M RN SWN +I GY G FFE ++ F RM EG + P++ T+V++L+AC
Sbjct: 181 KSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEG-IKPSEFTMVSLLNAC 239
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LGAL +W+H Y N + N V A+IDMY+KCG I+ A+ VF S K L WN
Sbjct: 240 ACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWN 299
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++I GLAM GRG A+ LF +++++ PD ++FIG+L AC H G+V+ YF M+
Sbjct: 300 SLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSET 359
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I P I+HY CMVD+L RAG L EA + +K MP+ DA+IW +LL SCR Y N+E+A+
Sbjct: 360 YKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQ 419
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
A +R+ EL+P ++F++LSN+Y +++ ++++++ K PGCS IEVN
Sbjct: 420 AAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVN 475
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 184/406 (45%), Gaps = 45/406 (11%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITAC-AQLKQMTYARKMFDKITDQNVVSWNAMF 72
+ K L +I Q++ +GL K R++ C + + YA +F +I + N+ WN +
Sbjct: 8 SMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTII 67
Query: 73 NGYAQNEFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
G++Q+ + LF M P T+P V K+ ++ EG +LH V+K G
Sbjct: 68 RGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLG 127
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
+ F+ ++ +Y + A ++F +VV W +MI G CG+I +R LF+
Sbjct: 128 LENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFD 187
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV---------------------- 228
R+ + WN+++SGY+ EA +LF +M ++ +
Sbjct: 188 KMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQ 247
Query: 229 -----------------ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
I ++ Y+ G +++ ++F+ P++ + WN LI G A
Sbjct: 248 GEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAM 307
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK-WVHVYAEYNGYQGNV 330
+G E + F + L + P+ + + VL+AC G +D +K + + +E + ++
Sbjct: 308 SGRGNEAVRLFSK-LESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSI 366
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ ++D+ + G++E A ++ SM D I W +++S +G
Sbjct: 367 KHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYG 412
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 154/341 (45%), Gaps = 32/341 (9%)
Query: 22 QTQVVTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q + G D +T +I A+ ++ +R++FDK+ +N VSWN+M +GY +
Sbjct: 150 EAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGR 209
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ LF++M++ P+ FT +L +C + ALR+GE +H ++KN F N V TA
Sbjct: 210 FFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITA 269
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
+I++YS +I+ A +VF ++ + W S+I G G A LF ++
Sbjct: 270 IIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPD 329
Query: 201 NTIVSGYIDVRN---MIE-ARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLF 251
+ G + N M++ A+ F M + + ++ M+ G +EE + L
Sbjct: 330 HVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELI 389
Query: 252 EEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
+ MP + W L+ G A KR+ + PN+++ +LS
Sbjct: 390 KSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRV---NELDPNESSSFILLS------- 439
Query: 311 LDFSKWVHVYAEYNGY----QGNVCVGNALIDMYAKCGIIE 347
+VYA +N + + + + +D C +IE
Sbjct: 440 -------NVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIE 473
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 278/507 (54%), Gaps = 64/507 (12%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y ++ A+L + ARK+FD++ +++VVSWN + YA+ + L+ ++L
Sbjct: 130 YSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRL 189
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D N F+F VL CVK+ L+ +++H VL GF +N+
Sbjct: 190 DMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNL------------------- 230
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
V+ +S+++ Y CG++ RC
Sbjct: 231 ------------VLSSSIVDAYSKCGEM---RC--------------------------- 248
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
AR LFD+M KD+ +W T++SGYA GD+ LF +MPE+N SW+ LI GYA N L
Sbjct: 249 -ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSL 307
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E LD F +M+ G + P T + L ACA + AL K VH Y ++ N V +
Sbjct: 308 GHEALDYFTKMMKFG-INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+LIDMY+KCG++E + VF+ M K D++ WNT+IS LA +G G A+ +F++M +G
Sbjct: 367 SLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLK 426
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITFI IL AC+H GLV+EGL +F++M D+ + P EHY C++DLL RAG E V+
Sbjct: 427 PDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVN 486
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
++ M + D +W+ LLG CR++ N+EL ER+ EL+P++ A +V L+++Y LG+
Sbjct: 487 ELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGK 546
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEV 540
W+ V +++ M + +K G S I+V
Sbjct: 547 WESVEKVRELMDEKFIRKERGISWIDV 573
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 156/344 (45%), Gaps = 39/344 (11%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
I+ N ++ Y + +EARK+FD+M +++ SWN ML+GYA GDV ++LF+ M E
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFK--RMLTEGRVFPNDATIVTVLSACARLGALDFS 314
++V SWN ++ YA G F E + ++ R L G N + VL C +L L +
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGF---NAFSFAGVLILCVKLKELQLA 214
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
K VH G+ N+ + ++++D Y+KCG + A +F+ M KD+ W TI+SG A
Sbjct: 215 KQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKW 274
Query: 375 GRGAGALSLFHEM--KNA-----------------------------GEMPDGITFIGIL 403
G A LFH+M KN G P+ TF L
Sbjct: 275 GDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCL 334
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
CAC + ++ G + Y I ++D+ ++ G L + M + D
Sbjct: 335 CACASIAALKHGKQVHGYLIRTYFRCNTIV-VSSLIDMYSKCGMLEASCCVFHLMGNKQD 393
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLS 505
V+W ++ + + E A + E L+P V+LS
Sbjct: 394 VVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 295/547 (53%), Gaps = 18/547 (3%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDY-ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
E + ++ V+ +GL + I ++ A+ + A +F+ + +++ VSWN++
Sbjct: 400 EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 459
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+G QNE F +M++ +MP+ FT L SC + + GE++HC LK G
Sbjct: 460 ISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGL 519
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++ V AL+ LY+ KVF M E + V W S+I VS + L
Sbjct: 520 DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 579
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK-----------KDVISWNTMLSGYAN 240
R W +I++ + + + L + + D N +LS Y
Sbjct: 580 QMMRGG--WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK 637
Query: 241 NGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G++ EC+++F M E R+ SWN +I GY +N L + +D M+ +G+ + T
Sbjct: 638 CGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL-DSFTFA 696
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
T+LSACA + L+ VH + +V VG+AL+DMY+KCG I+ A F M +
Sbjct: 697 TILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 756
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
++ +WN++ISG A HG G AL LF M G+ PD +TF+G+L AC+H+G VEEG +F
Sbjct: 757 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHF 816
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS-CRVY- 477
+SM+ Y + P++EH+ CMVDLL RAG+L E DF+ MP++ + +IW +LG+ CR
Sbjct: 817 KSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANG 876
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
+N EL A E L ELEP+N N+V+L+N+Y +W+DVA+ + AM++ KK GCS
Sbjct: 877 RNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSW 936
Query: 538 IEVNEVV 544
+ + + V
Sbjct: 937 VTMKDGV 943
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 220/481 (45%), Gaps = 26/481 (5%)
Query: 15 TKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
++ ++ Q + G + +++ +I ++ + A+K+FD+++++N+V+W + +G
Sbjct: 87 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKI--NALREGEELHCLVLKNGFR 132
Y QN F M + +PN + F L++C + + + G ++H L+ K +
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206
Query: 133 ANIFVGTALIELY-STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++ V LI +Y S + A VF + RN + W S+I+ Y GD VSA LF
Sbjct: 207 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSS 266
Query: 192 APER---------DVILWNTIVSGYIDVR-NMIEARKLFDQMPK----KDVISWNTMLSG 237
+ + + I + V + ++ ++ K +D+ + ++SG
Sbjct: 267 MQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSG 326
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
+A G ++ K +FE+M RNV S NGL+ G F M + V N +
Sbjct: 327 FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLVGINSDS 384
Query: 298 IVTVLSACARLGALDFSKW----VHVYAEYNGYQGN-VCVGNALIDMYAKCGIIENAVDV 352
V +LSA + L+ + VH + G N V +GN L++MYAK G I +A V
Sbjct: 385 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSV 444
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M KD ++WN++ISGL + A FH M+ G MP T I L +C +G +
Sbjct: 445 FELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWI 504
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
G + + + ++ L A G E + MP E D V W +++G
Sbjct: 505 MLG-EQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIG 562
Query: 473 S 473
+
Sbjct: 563 A 563
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 213/457 (46%), Gaps = 28/457 (6%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK----LDAMPNCFTF-PIVL 107
AR +FD I +N +SWN++ + Y++ + LF+ M+K PN +TF ++
Sbjct: 229 ARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT 288
Query: 108 KSCVKIN-ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
+C ++ L E++ V K+GF +++V +AL+ ++ + A +F +M RNV
Sbjct: 289 TACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNV 348
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPERDVILWNT-----IVSGYIDVRNMIEARK--- 218
V ++ G + +A +F +D++ N+ ++S + + + E R+
Sbjct: 349 VSMNGLMVGLVKQKQGEAAAKVFH--EMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGR 406
Query: 219 ------LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ + V N +++ YA +G + + +FE M E++ SWN LI G N
Sbjct: 407 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 466
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
+ ++F RM G + P++ T+++ LS+CA LG + + +H G +V V
Sbjct: 467 ECSEDAAESFHRMRRTGSM-PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSV 525
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA-MHGRGAGALSLFHEMKNAG 391
NAL+ +YA+ G + VF+ M D ++WN++I L+ + A+ F +M G
Sbjct: 526 SNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGG 585
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
+TFI IL A + + L E ++ + Y + ++ + G + E
Sbjct: 586 WGLSRVTFINILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNEC 644
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
RM D V W +++ Y + EL A++
Sbjct: 645 EKIFARMSETRDEVSWNSMISG---YIHNELLHKAMD 678
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 258/451 (57%), Gaps = 10/451 (2%)
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ TFPI LKS ++ + LR GE+LH LK N V T+L+ LY+ + A +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRN 212
VF EM + V WT++I Y+ GD+ A R F D +++ V +
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 213 MIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ ++ + + V + Y G++ + + +F++M +++ +W ++GG
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
YA+NG E LD F M EG V P+ + LSAC RLGALD + +++ +
Sbjct: 248 YASNGHPREALDLFLAMQAEG-VRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
N +G ALIDMYAKCG A VF M KD+I WN +I GL M G A +L +M+
Sbjct: 307 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQME 366
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+G + TFIG+LC+CTH GL+++G YF +M Y I P+IEHYGC+VDLL+RAG L
Sbjct: 367 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLL 426
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + MP+ A+AVI LLG C++++N ELAE L +L LEP N N+VMLSNIY
Sbjct: 427 QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIY 486
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRW+D A++++ M++ G +K+P CS +E
Sbjct: 487 SNRGRWEDAAKLRLDMKEKGVEKVPACSWVE 517
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 19/367 (5%)
Query: 24 QVVTSGLEKSDYITPRIITAC----AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ L+ + P ++T+ A+ + A+++FD++ + VSW A+ Y
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 151
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R V + P+ FT VL +C ++ L GE + + G ++FV T
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 211
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A ++LY + A +VF +M +++ V W +M+ GY S G A LF V
Sbjct: 212 AAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRP 271
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----------YANNGDVEECKR 249
V+G + + A L Q + ++ W+ L YA G E
Sbjct: 272 DCYAVAGALSACTRLGALDLGRQAIR--MVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 329
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F++M ++++ WN +I G G +M G V ND T + +L +C G
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG-VKLNDNTFIGLLCSCTHTG 388
Query: 310 AL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTI 367
+ D ++ H + + ++D+ ++ G+++ A + + M + + +
Sbjct: 389 LIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGAL 448
Query: 368 ISGLAMH 374
+ G +H
Sbjct: 449 LGGCKIH 455
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/554 (33%), Positives = 288/554 (51%), Gaps = 45/554 (8%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ + I + + AR +FDKI ++ +W + + ++ + + +
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71
Query: 95 DAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
+ + P+ V K+C + + + +H ++ GF +++ +G ALI++Y + E
Sbjct: 72 NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131
Query: 154 AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---LAPER--------------- 195
A VF M R+V+ WTSM + Y++CG + A F L ER
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191
Query: 196 ---------------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
+V + + +V+ Y ++ +A+ +FD M ++D +SWN +
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251
Query: 235 LSGYANNGDVEECKRLFEEMPER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
++ Y N + E+ +F M N SWN +IGG NG + L+ RM G
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG- 310
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
PN TI +VL AC L +L K +H Y + + ++ AL+ MYAKCG +E +
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
VF+ M +D ++WNT+I +MHG G AL LF EM ++G P+ +TF G+L C+H
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
LV+EGL F SM+ D+S+ P +H+ CMVD+L+RAGRL EA +F+K+MPIE A W L
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
LG CRVYKNVEL +A RL E+E NP N+V+LSNI W + + + MRD G
Sbjct: 491 LGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVT 550
Query: 531 KLPGCSSIEVNEVV 544
K PGCS I+V V
Sbjct: 551 KNPGCSWIQVRNRV 564
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 15/262 (5%)
Query: 22 QTQVVTSGLEKSDYITPRI-ITACAQLKQMTYARKMFDKITDQ----NVVSWNAMFNGYA 76
Q Q+V + + D ++ + ITA K+ +F ++ + N SWNA+ G
Sbjct: 232 QAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCM 291
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN + + ++M+ PN T VL +C + +LR G+++H + ++ F ++
Sbjct: 292 QNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLT 351
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
TAL+ +Y+ +E + +VF M +R+ V W +MI G+ A LF +
Sbjct: 352 TTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSG 411
Query: 197 V----ILWNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEEC 247
V + + ++SG R + E +FD M + D + M+ + G +EE
Sbjct: 412 VRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEA 471
Query: 248 KRLFEEMP-ERNVFSWNGLIGG 268
++MP E +W L+GG
Sbjct: 472 YEFIKKMPIEPTAGAWGALLGG 493
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 291/578 (50%), Gaps = 82/578 (14%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITP--RIITACAQLKQMTYARKMFDKITDQ-NV 65
++Q ++K L Q+ Q+V KS +P +++ LK TYA +F I N
Sbjct: 25 AKQCSSSKTLQQVHAQMVV----KSSIHSPNNHLLSKAIHLKNFTYASLLFSHIAPHPND 80
Query: 66 VSWNAMFNGYAQNEFHRTV-VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
++N M H + + LF +M L PN FTFP SC + L H
Sbjct: 81 YAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHS 140
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
LV K ++ +LI +YS CG +
Sbjct: 141 LVFKLALHSDPHTTHSLITMYSR-------------------------------CGRVAF 169
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD--------VIS------ 230
AR +F+ P RD++ WN++++GY EA ++F +M ++D ++S
Sbjct: 170 ARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACG 229
Query: 231 ---------W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
W + ++S YA GD+ +R+F+ M R+V +WN
Sbjct: 230 ELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNA 289
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GYA NG+ E + F M E V N T+ VLSACA +GALD K + YA
Sbjct: 290 VISGYAQNGMADEAISLFHAM-KEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQR 348
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G+Q ++ V ALIDMYAKCG + +A VF M K+ +WN +IS LA HG+ ALSLF
Sbjct: 349 GFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLF 408
Query: 385 HEMKN--AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
M + G P+ ITF+G+L AC H GLV EG F M+ + +VP+IEHY CMVDLL
Sbjct: 409 QCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLL 468
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
ARAG L EA D +++MP + D V LLG+CR KNV++ E + + E++P N N++
Sbjct: 469 ARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYI 528
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ S IY +L W+D AR+++ MR G K PGCS IEV
Sbjct: 529 ISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEV 566
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 321/622 (51%), Gaps = 86/622 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ---NVV 66
Q +H Q+ + V +G S +++ R+++ ++ ++ ARK+F + N +
Sbjct: 46 RQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFL 105
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN++ + + + L+ +M+ + + FTFP++L++ + A + LHC V
Sbjct: 106 LWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHV 165
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD------------------------ 162
++ GF+ ++ VG LI +Y+ + ++ A KVF +M
Sbjct: 166 VQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGAS 225
Query: 163 -----------ERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVIL------ 199
E N V WTS+++ + CG + LF + P +++
Sbjct: 226 RMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVC 285
Query: 200 --WNTIVSG--------------YIDVRNMI-----------EARKLFDQMPKKDVISWN 232
T+ SG Y+ +N + +A KLF +M K+++SWN
Sbjct: 286 ADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWN 345
Query: 233 TMLSGYANNGDVEECKRLFEEM------PER--NVFSWNGLIGGYANNGLFFEVLDAFKR 284
++S +A +G ++ L ++ PE NV +W+ +I G+A+ GL E L+ F++
Sbjct: 346 ALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRK 405
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
M V N TI +VLS CA L AL+ + +H + NV VGN LI+MY KCG
Sbjct: 406 MQL-ANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCG 464
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
+ VF ++ +D I+WN++I+G HG G AL+ F+ M +G PDG+TFI L
Sbjct: 465 SFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALS 524
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC+H GLV EG F M ++ I P+IEHY CMVDLL RAG + EA + +K MP+E +A
Sbjct: 525 ACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNA 584
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM 524
IW++LL SCR++K+ +LAE A +++ L K + ++LSNI+ RW+D AR++++
Sbjct: 585 YIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSARVRISA 644
Query: 525 RDTGFKKLPGCSSIEVNEVVML 546
R G KK+PG S IEV + V +
Sbjct: 645 RAKGLKKVPGWSWIEVKKKVYM 666
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 298/541 (55%), Gaps = 10/541 (1%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+ E+ + Q+ VV G + + + ++ + + + + A +F + +++ V++NA
Sbjct: 151 EFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNA 210
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY++ F+ + LF +M+ L P+ FTF VL + ++++ + G+++H V+K
Sbjct: 211 LLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCN 270
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F N+FV AL++ YS I A K+F EM E + + + +I G + + LF
Sbjct: 271 FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFR 330
Query: 191 LAP----ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNG 242
+R + T++S + N+ R++ Q D IS N+++ YA
Sbjct: 331 ELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD 390
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
E R+F ++ ++ W LI GY GL + L F M ++ + AT ++L
Sbjct: 391 KFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEM-HRAKIGADSATYASIL 449
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
ACA L +L K +H +G NV G+AL+DMYAKCG I+ A+ +F M ++ +
Sbjct: 450 RACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSV 509
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
+WN +IS A +G G AL F +M ++G P+ ++F+ ILCAC+H GLVEEGL YF SM
Sbjct: 510 SWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSM 569
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y + P+ EHY MVD+L R+GR EA + RMP E D ++W+++L SCR++KN EL
Sbjct: 570 TQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQEL 629
Query: 483 AELALERLTELEP-KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
A A ++L ++ ++ A +V +SNIY G W V ++K A+R+ G +K+P S +E+
Sbjct: 630 AIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIK 689
Query: 542 E 542
+
Sbjct: 690 Q 690
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 203/436 (46%), Gaps = 19/436 (4%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
++ AR +FD + ++VV+W + GYAQ+ LF M + +P+ T +L
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSG 148
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
+ ++ E ++H V+K G+ + + V +L++ Y +++ A +F M E++ V +
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208
Query: 170 TSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+++ GY G A LF +L + +++ I + ++ +++ + K
Sbjct: 209 NALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268
Query: 226 KDVISW-----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ + W N +L Y+ + + E ++LF EMPE + S+N LI A NG E L+
Sbjct: 269 CNFV-WNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327
Query: 281 AFKRML---TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALI 337
F+ + + R FP T+LS A L+ + +H A V VGN+L+
Sbjct: 328 LFRELQFTRFDRRQFP----FATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLV 383
Query: 338 DMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
DMYAKC A +F + + + W +ISG G L LF EM A D
Sbjct: 384 DMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSA 443
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T+ IL AC ++ + G S + + + +VD+ A+ G + EA+ +
Sbjct: 444 TYASILRACANLASLTLG-KQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQE 502
Query: 458 MPIEADAVIWANLLGS 473
MP+ ++V W L+ +
Sbjct: 503 MPVR-NSVSWNALISA 517
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 8/296 (2%)
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+N V ++ ++ ARKLFD+MP K+VIS NTM+ GY +G++ + LF+ M +R+V
Sbjct: 45 FNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSV 104
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+W LIGGYA + F E + F M G V P+ T+ T+LS +++ VH
Sbjct: 105 VTWTMLIGGYAQHNRFLEAFNLFADMCRHGMV-PDHITLATLLSGFTEFESVNEVAQVHG 163
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+ GY + V N+L+D Y K + A +F M KD +T+N +++G + G
Sbjct: 164 HVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHD 223
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
A++LF +M++ G P TF +L A M +E G S + + V + ++
Sbjct: 224 AINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFG-QQVHSFVVKCNFVWNVFVANALL 282
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC----RVYKNVEL-AELALERL 490
D ++ R+ EA MP E D + + L+ C RV +++EL EL R
Sbjct: 283 DFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCCAWNGRVEESLELFRELQFTRF 337
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/573 (32%), Positives = 295/573 (51%), Gaps = 75/573 (13%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L K +H + +V SG + + A+ +Q+ ARK+FD++ ++++VSWN
Sbjct: 150 ELRVGKEIHGL---LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNT 206
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY+QN R + + M + + P+ T VL + + +R G+E+H ++ G
Sbjct: 207 IVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAG 266
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F + + + TAL+++Y+ CG + +AR LF+
Sbjct: 267 FDSLVNIATALVDMYA-------------------------------KCGSLKTARLLFD 295
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------PK------------------- 225
ER+V+ WN+++ Y+ N EA +F +M P
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 226 --------------KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
++V N+++S Y +V+ +F ++ R + SWN +I G+A
Sbjct: 356 GRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQ 415
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG E L+ F +M V P+ T V+V++A A L +KW+H N NV
Sbjct: 416 NGRPIEALNYFSQMQAR-TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVF 474
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V AL+DMYAKCG I A +F+ M + + TWN +I G HG G AL LF EM+
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGT 534
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+G+TF+ ++ AC+H GLVE GL F M +YSI P ++HYG MVDLL RAGRL EA
Sbjct: 535 IRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEA 594
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
DF+ +MP++ ++ +LG+C+++KNV AE ERL EL P++ V+L+NIY
Sbjct: 595 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAA 654
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
W+ V +++V+M G +K PGCS +E+ NEV
Sbjct: 655 SMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 232/502 (46%), Gaps = 32/502 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E+ + K L I + +GL + ++++ + + A ++F+ I + V +
Sbjct: 45 ERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYY 104
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M G+A+ + F +M+ + P + F +LK C LR G+E+H L++K+
Sbjct: 105 TMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIV 183
GF ++F T L +Y+ + + A KVF M ER++V W +++ GY G ++V
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNM-----------IEARKLFDQMPKKDVISWN 232
+ C L P + TIVS V + R FD + V
Sbjct: 225 NLMCEENLKPS-----FITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSL----VNIAT 275
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
++ YA G ++ + LF+ M ERNV SWN +I Y N E + F++ML EG V
Sbjct: 276 ALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG-VK 334
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P D +++ L ACA LG L+ +++H + NV V N+LI MY KC ++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F + ++ +++WN +I G A +GR AL+ F +M+ PD T++ ++ A + +
Sbjct: 395 FGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSIT 454
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ + M + + +VD+ A+ G + A + M E W ++
Sbjct: 455 HHA-KWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMID 512
Query: 473 SCRVYKNVELAELALERLTELE 494
Y + + ALE E++
Sbjct: 513 G---YGTHGIGKAALELFEEMQ 531
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 288/526 (54%), Gaps = 14/526 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE-FHRTVVVL 87
GL +++ +I + + AR +F K+ ++VV+WNAM GYA + +H + L
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---IFVGTALIEL 144
PN T +L + AL +G +H L+ N + +GTAL+++
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVILWNTI 203
Y+ K + A +VF M RN V W+++I G++ C + A LF ++ E L T
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 204 VSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V+ + V + + Q+ D+ + N++LS YA G + E F+E+
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
++ S+ L+ G NG E FK+M + P+ AT+V+++ AC+ L AL K
Sbjct: 370 VKDTISYGALLSGCVQNGKAEEAFLVFKKM-QACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
H G + N+LIDMYAKCG I+ + VF+ M +D+++WNT+I+G +HG
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G A +LF MKN G PD +TFI ++ AC+H GLV EG +F +M Y I+P++EHY
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
CMVDLLAR G L EA F++ MP++AD +W LLG+CR++KN++L + + +L P
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ NFV+LSNI+ GR+ + A +++ + GFKK PG S IE+N
Sbjct: 609 EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEIN 654
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 209/455 (45%), Gaps = 42/455 (9%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
Q+ AR++FD+I + ++NA+ Y+ FH + L+ M + PN +TFP VL
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFH-AAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
K+C + LR G +H G ++FV TALI+LY A VF +M R+VV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 168 VWTSMINGYISCG----------DI-------VSARCLFELAP---ERDVILWNTIVSGY 207
W +M+ GY + G D+ +A L L P + + T + Y
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+R +E ++ V+ +L YA + R+F MP RN +W+ LIG
Sbjct: 228 C-LRACLEQN-------EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIG 279
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ E + FK ML EG F + ++ + L CA L L +H +G
Sbjct: 280 GFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
++ N+L+ MYAK G+I A F+ + KD I++ ++SG +G+ A +F +M
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS-----MAMDYSIVPQIEHYGCMVDLL 442
+ PD T + ++ AC+H+ ++ G S +A++ SI ++D+
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC------NSLIDMY 453
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
A+ G++ + +MP D V W ++ ++
Sbjct: 454 AKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH 487
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 7/251 (2%)
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
KD W L + + G + +++F+ +P + ++N LI Y+ G F +D ++ M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
L RV PN T VL AC+ L L + +H +A G ++ V ALID+Y +C
Sbjct: 92 L-RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILC 404
A +VF M +D++ WN +++G A HG A++ +M++ G + P+ T + +L
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 405 ACTHMGLVEEGLS---YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
G + +G S Y ++ + Q+ ++D+ A+ +L A MP+
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQN-EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269
Query: 462 ADAVIWANLLG 472
D V W+ L+G
Sbjct: 270 ND-VTWSALIG 279
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 22/323 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ + +++ A+ + A FD+I ++ +S+ A+ +G QN
Sbjct: 328 QLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNG 387
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G+ H V+ G +
Sbjct: 388 KAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN 447
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
+LI++Y+ I+ + +VF +M R+VV W +MI GY G A LF AP
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAP 507
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECK 248
D + + +++ + E + FD M K I + M+ A G ++E
Sbjct: 508 --DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAY 565
Query: 249 RLFEEMP-ERNVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ + MP + +V W L+G + N L +V +++ EG N + + SA
Sbjct: 566 QFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT--GNFVLLSNIFSA 623
Query: 305 CARLGALDFSKWVHVYAEYNGYQ 327
R D + V + + G++
Sbjct: 624 AGR---FDEAAEVRIIQKVKGFK 643
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 288/526 (54%), Gaps = 14/526 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE-FHRTVVVL 87
GL +++ +I + + AR +F K+ ++VV+WNAM GYA + +H + L
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN---IFVGTALIEL 144
PN T +L + AL +G +H L+ N + +GTAL+++
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVILWNTI 203
Y+ K + A +VF M RN V W+++I G++ C + A LF ++ E L T
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309
Query: 204 VSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V+ + V + + Q+ D+ + N++LS YA G + E F+E+
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
++ S+ L+ G NG E FK+M + P+ AT+V+++ AC+ L AL K
Sbjct: 370 VKDTISYGALLSGCVQNGKAEEAFLVFKKM-QACNMEPDIATMVSLIPACSHLAALQHGK 428
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
H G + N+LIDMYAKCG I+ + VF+ M +D+++WNT+I+G +HG
Sbjct: 429 CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHG 488
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G A +LF MKN G PD +TFI ++ AC+H GLV EG +F +M Y I+P++EHY
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
CMVDLLAR G L EA F++ MP++AD +W LLG+CR++KN++L + + +L P
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+ NFV+LSNI+ GR+ + A +++ + GFKK PG S IE+N
Sbjct: 609 EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEIN 654
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 42/450 (9%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
Q+ AR++FD+I + ++NA+ Y+ FH + L+ M + PN +TFP VL
Sbjct: 49 QLALARQVFDRIPAPDARAYNALIRAYSWLGPFH-AAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
K+C + LR G +H G ++FV TALI+LY A VF +M R+VV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 168 VWTSMINGYISCG----------DI-------VSARCLFELAP---ERDVILWNTIVSGY 207
W +M+ GY + G D+ +A L L P + + T + Y
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+R +E ++ V+ +L YA + R+F MP RN +W+ LIG
Sbjct: 228 C-LRACLEQN-------EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIG 279
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ E + FK ML EG F + ++ + L CA L L +H +G
Sbjct: 280 GFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
++ N+L+ MYAK G+I A F+ + KD I++ ++SG +G+ A +F +M
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM 399
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS-----MAMDYSIVPQIEHYGCMVDLL 442
+ PD T + ++ AC+H+ ++ G S +A++ SI ++D+
Sbjct: 400 QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC------NSLIDMY 453
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
A+ G++ + +MP D V W ++
Sbjct: 454 AKCGKIDLSRQVFDKMPAR-DVVSWNTMIA 482
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 7/251 (2%)
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
KD W L + + G + +++F+ +P + ++N LI Y+ G F +D ++ M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
L RV PN T VL AC+ L L + +H +A G ++ V ALID+Y +C
Sbjct: 92 L-RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILC 404
A +VF M +D++ WN +++G A HG A++ +M++ G + P+ T + +L
Sbjct: 151 FGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210
Query: 405 ACTHMGLVEEGLS---YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
G + +G S Y ++ + Q+ ++D+ A+ +L A MP+
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQN-EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269
Query: 462 ADAVIWANLLG 472
D V W+ L+G
Sbjct: 270 ND-VTWSALIG 279
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 22/323 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + SG+ + +++ A+ + A FD+I ++ +S+ A+ +G QN
Sbjct: 328 QLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNG 387
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++F +M+ + P+ T ++ +C + AL+ G+ H V+ G +
Sbjct: 388 KAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN 447
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
+LI++Y+ I+ + +VF +M R+VV W +MI GY G A LF AP
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAP 507
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECK 248
D + + +++ + E + FD M K I + M+ A G ++E
Sbjct: 508 --DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAY 565
Query: 249 RLFEEMP-ERNVFSWNGLIGG---YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ + MP + +V W L+G + N L +V +++ EG N + + SA
Sbjct: 566 QFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGT--GNFVLLSNIFSA 623
Query: 305 CARLGALDFSKWVHVYAEYNGYQ 327
R D + V + + G++
Sbjct: 624 AGR---FDEAAEVRIIQKVKGFK 643
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 287/533 (53%), Gaps = 37/533 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T A+ ++ AR++F++I D+NVVSWNAM +GYA+N + LF M D +
Sbjct: 102 LLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDV-- 159
Query: 100 CFTFPIVLKSCVKINALREGEELH----------CLVLKNGF-------RANIFVG---- 138
++ ++ +K +RE EL C L +G+ A + G
Sbjct: 160 --SWLTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQT 217
Query: 139 ------TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+I Y+ ++ A ++F EM E++V+ T+++ GY+ G + +A +F+
Sbjct: 218 RNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDM 277
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P RD + WNT++ G++ + +A KLF +MP +D ISW+ +L GY GD++ F
Sbjct: 278 PHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMDSANVWFP 337
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P ++ SWN LI GY + G L M+ G + P+ AT+ V+S CA L +L
Sbjct: 338 RAPNKDAISWNTLISGYKDEG----ALSLLSEMI-RGGLKPDQATLSVVISICASLVSLG 392
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K VH++A G++ + V ++LI MY+KCG+I A VF + +D +TWN +I+ A
Sbjct: 393 CGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYA 452
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG AL +F M AG PD TF+ IL AC H G + EG +F+SM D+++VP+
Sbjct: 453 YHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRS 512
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY CMVDLL R+G + +A DF +R+P + W L +C + ++L E+ + +
Sbjct: 513 DHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSACNSHGEIQLGEIIARNVLK 572
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN-EVV 544
P + + +LSNIY W A ++ M++ G KK GCS IE+ EVV
Sbjct: 573 ARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVV 625
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 210/440 (47%), Gaps = 42/440 (9%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKIN 114
FD+++++NV +WN M +G +N +L K DAMP N ++ +L +
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNR------MLAEARKVFDAMPVRNSVSWAALLTGYARCG 110
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ E EL + N+ A++ Y+ ++ A ++F M R+ V W +MI+
Sbjct: 111 RVAEARELFNRIPDR----NVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMIS 166
Query: 175 GYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
GYI + AR LF+ P + N ++SGY+++ M A LF QM ++ +SWN M
Sbjct: 167 GYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVM 226
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
++GYA G + +RLF+EMPE++V S ++ GY NG FK M P+
Sbjct: 227 ITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDM-------PH 279
Query: 295 DATIV--TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
T+ T++ R LD + + +++E + +A++ Y + G +++A
Sbjct: 280 RDTVAWNTMMDGFVRNDRLDDA--LKLFSEMP--DRDQISWHAILQGYVQQGDMDSANVW 335
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F KD I+WNT+ISG + GALSL EM G PD T ++ C LV
Sbjct: 336 FPRAPNKDAISWNTLISGY----KDEGALSLLSEMIRGGLKPDQATLSVVISICA--SLV 389
Query: 413 EEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G M ++I EH ++ + ++ G ++EA V + ++ D V W
Sbjct: 390 SLGCG---KMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQ-VFELILQRDTVTWN 445
Query: 469 NLLGSCRVYKNVELAELALE 488
++ + Y LA+ AL+
Sbjct: 446 AMIAT---YAYHGLADEALK 462
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL I+T G E + +I+ ++ ++ A ++F+ I ++ V+WNAM YA
Sbjct: 398 HLWAIKT-----GFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYA 452
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
+ + +F M K P+ TF +L +C L EG
Sbjct: 453 YHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEG 495
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
G+V N I+ + + G + A VF+ M +++ TWN ++SGL + A A +F M
Sbjct: 32 GDVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAM 91
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ + +++ +L G V E F + D ++V + MV AR G
Sbjct: 92 P----VRNSVSWAALLTGYARCGRVAEARELFNRIP-DRNVVS----WNAMVSGYARNGM 142
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
+ A + MP D V W ++ K+V A
Sbjct: 143 VKRARELFDMMPWR-DDVSWLTMISGYIKRKHVREAR 178
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 297/533 (55%), Gaps = 11/533 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++T+G E + ++ +++ A+ +Q+ A KMF+++ +++VSW + GYAQN
Sbjct: 166 EIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNG 225
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + L QM++ P+ T +L + + ALR G +H ++GF + + V
Sbjct: 226 HAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTN 285
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVI 198
AL+++Y + A VF M + VV W +MI+G G+ A F ++ E +V
Sbjct: 286 ALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVP 345
Query: 199 LWNTIVSGYIDVRNMIE------ARKLFDQMPKKDVIS-WNTMLSGYANNGDVEECKRLF 251
T++ + N+ + KL D++ +S N+++S Y+ V+ +F
Sbjct: 346 TRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIF 405
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ + NV +WN +I GYA NG E L+ F M ++G + + T+V V++A A
Sbjct: 406 NNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQG-IKLDCFTLVGVITALADFSVN 463
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+KW+H A NV V AL+DMYAKCG I+ A +F+ M + +ITWN +I G
Sbjct: 464 RQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGY 523
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G L LF+EM+ P+ ITF+ ++ AC+H G VEEGL F+SM DY + P
Sbjct: 524 GTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPT 583
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++HY MVDLL RAG+L +A +F++ MPI+ + +LG+C+++KNVEL E A ++L
Sbjct: 584 MDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLF 643
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
+L+P V+L+NIY W VA+++ AM D G K PGCS +E+ NE+
Sbjct: 644 KLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEI 696
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 222/466 (47%), Gaps = 12/466 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E + K L+QI ++ +G ++I+ + + A ++F+ + + V ++
Sbjct: 55 ENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYH 114
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M GYA+N + F +M + + +L+ C + L++G E+H L++ N
Sbjct: 115 IMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITN 174
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +N+FV TA++ LY+ + I+ AYK+F M +++V WT+++ GY G A L
Sbjct: 175 GFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLV 234
Query: 190 ----ELAPERDVILWNTIVSGYIDVRNMIEARKL----FDQMPKKDVISWNTMLSGYANN 241
E + D + +I+ D++ + R + F + V N +L Y
Sbjct: 235 LQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKC 294
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G + +F+ M + V SWN +I G A NG E F +ML EG V P T++ V
Sbjct: 295 GSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEV-PTRVTMMGV 353
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L ACA LG L+ +VH + NV V N+LI MY+KC ++ A +FN+++ K
Sbjct: 354 LLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE-KTN 412
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+TWN +I G A +G AL+LF M++ G D T +G++ A V +
Sbjct: 413 VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFS-VNRQAKWIHG 471
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+A+ + + +VD+ A+ G + A M E + W
Sbjct: 472 LAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQ-ERHVITW 516
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 271/478 (56%), Gaps = 48/478 (10%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK--VFGEMDE 163
+L C + +++ +H +++NG +V T LI + + +Y VFG+++
Sbjct: 48 ILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 164 RNVVVWTSMINGY----------------------------------------ISCGDIV 183
N +WT+MI GY + G V
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
A+ + D+ + N+++ Y+ + ARK+FD+M ++DV+SW ++ YA GD
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E LF+++P +++ +W ++ GYA NG E L+ F++M G + ++ T+ V+S
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVG-METDEVTLAGVIS 283
Query: 304 ACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
ACA+LGA+ + W+ AE +G+ GNV VG+ALIDMY+KCG + A VF M +++
Sbjct: 284 ACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNV 343
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+++++I G AMHGR AL LFH+M P+ +TFIGIL AC+H GLVE+G F
Sbjct: 344 FSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAK 403
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M + + P +HY CMVDLL RAG L EA+D VK MP+E + +W LLG+CR++ N +
Sbjct: 404 MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPD 463
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+A++A L +LEP N+++LSNIY GRW++V++++ +R+ GFKK PGCS E
Sbjct: 464 IAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 51/407 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFNG 74
+ Q+ ++ +GL + Y+ ++I ++ +Y +F ++ N W AM G
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 116
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNGFRA 133
YA +T+M++ P FTF + K+C + G+++H +L GF +
Sbjct: 117 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 176
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+++VG ++I+LY + A KVF EM ER+VV WT +I Y GD+ SA LF+ P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQM------------------------------ 223
+D++ W +V+GY EA + F +M
Sbjct: 237 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 224 -----------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
P +V+ + ++ Y+ G +E ++FE M ERNVFS++ +I GYA +
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G L F ML + + PN T + +LSAC+ G ++ + ++A+ + G
Sbjct: 357 GRAHSALQLFHDML-KTEIRPNKVTFIGILSACSHAGLVEQGR--QLFAKMEKFFGVAPS 413
Query: 333 GN---ALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ ++D+ + G +E A+D+ +M + + W ++ +HG
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 18/255 (7%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD--VFNS 355
++++L C + K VH + NG V LI M K + + VF
Sbjct: 45 LMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
++ + W +I G A+ G + + + + M+ G P TF + AC ++ G
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
+ + M+DL + G L A M E D V W L+ +
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYA 220
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
Y ++E A + +L K+ + + Y GR K+ M+D G
Sbjct: 221 KYGDMESASGLFD---DLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVG------- 270
Query: 536 SSIEVNEVVMLGCLS 550
+E +EV + G +S
Sbjct: 271 --METDEVTLAGVIS 283
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 261/444 (58%), Gaps = 12/444 (2%)
Query: 108 KSCVKINALREGEELHCL--VLKNGFRANIFVGTALIELYSTGKAIE-AAYKVFGEMDER 164
++ + I L E LH VL + + +F+ LI+ YS+ + + ++ +M
Sbjct: 18 QTKILIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQHQHQCFSLYSQMLLH 77
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAP--------ERDVILWNTIVSGYIDVRNMIEA 216
+ + N S +S+ L ++ E D+ ++ Y V + A
Sbjct: 78 SFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELA 137
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
RKLFDQMP + V +WN M++G+A GD++ LF MP RNV SW +I GY+ + +
Sbjct: 138 RKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYG 197
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E L F RM E + PN T+ ++ A A LGAL+ + V YA NG+ N+ V NA+
Sbjct: 198 EALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAV 257
Query: 337 IDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
++MYAKCG I+ A VFN + + ++L +WN++I GLA+HG L L+ +M G PD
Sbjct: 258 LEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPD 317
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
+TF+G+L ACTH G+VE+G F+SM ++I+P++EHYGCMVDLL RAG+L EA + +
Sbjct: 318 DVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVI 377
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+RMP++ D+VIW LLG+C + NVELAE+A E L LEP NP N+V+LSNIY G+W
Sbjct: 378 QRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWD 437
Query: 516 DVARIKVAMRDTGFKKLPGCSSIE 539
VA+++ M+ + K G S IE
Sbjct: 438 GVAKLRKVMKGSKITKSAGHSFIE 461
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 184/406 (45%), Gaps = 55/406 (13%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ + QI + +G++++ + +++ ++ + YA K+ + +N + Y
Sbjct: 2 RQVKQIHGYTLRNGIDQTKILIEKLL----EIPNLHYAHKVLHHSPKPTLFLYNKLIQAY 57
Query: 76 AQNEFHR-TVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ + H+ L++QM +PN TF + +C +++ G+ LH +K+GF +
Sbjct: 58 SSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPD 117
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+F TAL+++Y+ +E A K+F +M R V W +M+ G+ GD+ A LF L P
Sbjct: 118 LFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPS 177
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPK----------------------------- 225
R+V+ W T++SGY + EA LF +M +
Sbjct: 178 RNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQR 237
Query: 226 -----------KDVISWNTMLSGYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNG 273
K++ N +L YA G ++ ++F E+ RN+ SWN +I G A +G
Sbjct: 238 VEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHG 297
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY----AEYNGYQGN 329
+ L + +ML EG P+D T V +L AC G ++ K H++ +N
Sbjct: 298 ECCKTLKLYDQMLGEGTS-PDDVTFVGLLLACTHGGMVE--KGRHIFKSMTTSFNIIPKL 354
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
G ++D+ + G + A +V M K D + W ++ + H
Sbjct: 355 EHYG-CMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFH 399
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 297/551 (53%), Gaps = 22/551 (3%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ- 63
AH + L K +H + ++ +G S +I ++ QM +A +F T +
Sbjct: 46 ASAHHKNLSKGKEIH---SYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEI 102
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
NV ++NA+ +G+ N F + +M+ +P+ FTFP +K+C+ + E +++H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDV---LEIKKIH 159
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
L+ K G ++F+G+AL+ Y +E A F E+ R+VV+W +M+NGY G
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 184 SARCLFELAPERDVILWNTIVSGYIDV----RNMIEARKLFDQMPK----KDVISWNTML 235
F + V+ V+G + V ++ R + K V N+++
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
Y +E+ +FE M E+++FSWN ++ + G L RML G + P+
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG-IQPDL 338
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQ------GNVCVGNALIDMYAKCGIIENA 349
T+ TVL AC+ L AL + +H Y +G +V + NA+IDMYAKCG + +A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
VF M KD+ +WN +I G MHG G AL +F M PD +TF+G+L AC+H
Sbjct: 399 HLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHA 458
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
G V +G ++ M Y + P IEHY C++D+L RAG+L EA + MPIEA+ V+W
Sbjct: 459 GFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRA 518
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LL +CR++K+ LAE+A +R+ ELEP++ ++V++SN+YG +GR+++V ++ MR
Sbjct: 519 LLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNV 578
Query: 530 KKLPGCSSIEV 540
+K PGCS IE+
Sbjct: 579 RKTPGCSWIEL 589
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
N T + L A A L K +H Y NG+ + +LI+MY+KC + A+ +F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 354 NSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
+ + ++ +N IISG +G + +M+N G +PD TF + AC + +
Sbjct: 96 SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI 155
Query: 413 EE--GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
++ GL + + +D I +V+ + G + A + +PI D V+W +
Sbjct: 156 KKIHGLLFKFGLELDVFIG------SALVNCYLKFGLMEHAQVAFEELPIR-DVVLWNAM 208
Query: 471 LGSCRVYKNVELAELALERLTELEPKN--PANFVM 503
+ Y + E+ LE + ++ P+ F +
Sbjct: 209 VNG---YAQIGQFEMVLETFRRMNDESVVPSRFTV 240
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 261/503 (51%), Gaps = 46/503 (9%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
R V L +++K P + +LK C+K AL+EG+++H + +G +++ L
Sbjct: 105 REAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRL 159
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
+++Y+ ++ A KVF EM R++ W MI+GY+ G+ AR LF+ P RD W
Sbjct: 160 LDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWT 219
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDV--------------------------------- 228
I+SG + EA +L+ M K D
Sbjct: 220 AIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMR 279
Query: 229 -------ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+ W ++L Y G +EE + +F++M ER+V SW +I Y NG E
Sbjct: 280 MGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFAL 339
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F R L + PND T VL+ACA L A D K +H Y G+ +AL+ MY+
Sbjct: 340 F-RHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYS 398
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
KCG IENA VF + DL +W +++ G A HG+ AL F + +G PDGI FIG
Sbjct: 399 KCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIG 458
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
+L AC H GLV++GL YF S+ + + I+HY C++DLLARAG+ EA + MPI+
Sbjct: 459 VLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIK 518
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
D IWA LLG CR++ N+ELA+ A + L E+EP+NPA +V L+NIY G + A I+
Sbjct: 519 PDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIR 578
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
M G K PG S IE+ V
Sbjct: 579 ETMDSRGIVKKPGMSWIEIRREV 601
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 176/407 (43%), Gaps = 62/407 (15%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + TSG YI+ R++ A+ + A K+FD++ +++ SWN M +GY +
Sbjct: 140 QVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGG 198
Query: 80 FHRTVVVLFTQMKKLDAMPN--CFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN--- 134
LF D MPN F++ ++ CV+ N E EL+ L+ K+ + +
Sbjct: 199 NFEKARNLF------DKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKC 252
Query: 135 ----IFVGTALIELYSTGKAIEAAYKVFG-EMDERNVVVWTSMINGYISCGDIVSARCLF 189
+A I GK I G + DE VVW S+++ Y CG I AR +F
Sbjct: 253 TISSALAASAAIPSLHMGKKIHGHIMRMGLDSDE---VVWCSLLDMYGKCGSIEEARYIF 309
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG------------ 237
+ ERDV+ W T++ Y+ E LF + +++ + +G
Sbjct: 310 DKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAED 369
Query: 238 ---------------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
Y+ GD+E K +FE +P+ ++FSW L+ GYA
Sbjct: 370 LGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYA 429
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGN 329
+G + L F+ +L G P+ + VLSACA G +D ++ H E +G
Sbjct: 430 QHGQHDKALHFFELLLKSG-TKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRT 488
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ +ID+ A+ G A + N M K D W ++ G +HG
Sbjct: 489 IDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHG 535
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 176/432 (40%), Gaps = 58/432 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++ GL+ + + ++ + + AR +FDK+ +++VVSW M + Y +N
Sbjct: 272 KIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNG 331
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF + + MPN FTF VL +C + A G+++H +++ GF + +
Sbjct: 332 RREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAAS 391
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+ +YS IE A VF + + ++ WTS++ GY G A FEL
Sbjct: 392 ALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFEL-------- 443
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE--- 256
L K D I++ +LS A+ G V++ F + E
Sbjct: 444 -------------------LLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHG 484
Query: 257 --RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
R + + +I A G F E + ++ E + P+ +L C G L+ +
Sbjct: 485 LTRTIDHYACIIDLLARAGQFTEA----ESIINEMPIKPDKYIWAALLGGCRIHGNLELA 540
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI-----TW----- 364
K + + N L ++YA G+ ++ +MD++ ++ +W
Sbjct: 541 KRA-AKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRR 599
Query: 365 --NTIISGLAMHGRGAGALSLFHE----MKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ G H + L E MK G +PD + + EE LSY
Sbjct: 600 EVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPD----TNFVLHDVELEQKEENLSY 655
Query: 419 F-QSMAMDYSIV 429
+ +A+ + I+
Sbjct: 656 HSEKLAVAFGII 667
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 295/576 (51%), Gaps = 77/576 (13%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+TGA LE K +H+ +G + +I A+ + AR +FD + D+
Sbjct: 246 STGA----LEWVKEVHK---HAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+V+SWNAM G AQN +F +M++ +P+ T+ +L + V A +E+H
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
++ G +++ VG+A + +Y I CG I
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMY-------------------------------IRCGSID 387
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----------------- 226
A+ +F+ R+V WN ++ G + EA LF QM ++
Sbjct: 388 DAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANV 447
Query: 227 --DVISW-------------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
+ + W N ++ YA G+ K++F++M ERNV +W +
Sbjct: 448 GEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVM 507
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I G A +G E F +ML EG + P+ T V++LSACA GAL++ K VH +A G
Sbjct: 508 ISGLAQHGCGHEAFSLFLQMLREG-IVPDATTYVSILSACASTGALEWVKEVHSHAVNAG 566
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
++ VGNAL+ MYAKCG +++A VF+ M +D+ +W +I GLA HGRG AL LF
Sbjct: 567 LVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFV 626
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
+MK G P+G +F+ +L AC+H GLV+EG F S+ DY I P +EHY CMVDLL RA
Sbjct: 627 KMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRA 686
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G+L EA F+ MPIE W LLG+C Y N+E+AE A + +L+PK+ + +V+LS
Sbjct: 687 GQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 746
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
NIY G W+ ++ M+ G +K PG S IEV+
Sbjct: 747 NIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVD 782
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 232/473 (49%), Gaps = 36/473 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA--- 76
+I ++ SG + + ++ + + A+ +FDK+ ++NV+SW M G A
Sbjct: 51 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYG 110
Query: 77 --QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Q FHR F QM++ +PN +T+ +L + AL +E+H + G +
Sbjct: 111 RGQEAFHR-----FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALD 165
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ VG AL+ +Y+ +I+ A VF M ER++ WT MI G G A LF L E
Sbjct: 166 LRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLF-LQME 224
Query: 195 RDVILWNTIVSGYIDVRN---------MIEARKLFDQMPKKDVIS----WNTMLSGYANN 241
R L N ++ Y+ + N + +++ K IS N ++ YA
Sbjct: 225 RGGCLPN--LTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKC 282
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G +++ + +F+ M +R+V SWN +IGG A NG E F +M EG V P+ T +++
Sbjct: 283 GSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV-PDSTTYLSL 341
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L+ GA ++ K VH +A G ++ VG+A + MY +CG I++A +F+ + +++
Sbjct: 342 LNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNV 401
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ- 420
TWN +I G+A G ALSLF +M+ G PD TF+ IL A + EE L + +
Sbjct: 402 TTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA----NVGEEALEWVKE 457
Query: 421 --SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
S A+D +V + +V + A+ G A M +E + W ++
Sbjct: 458 VHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMI 508
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 232/476 (48%), Gaps = 17/476 (3%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + LE K +H + V +GL + ++ A+ + AR +FD + ++++
Sbjct: 142 ASAGALEWVKEVH---SHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIF 198
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC--VKINALREGEELHC 124
SW M G AQ+ + LF QM++ +PN T+ +L + AL +E+H
Sbjct: 199 SWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHK 258
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
K GF +++ VG ALI +Y+ +I+ A VF M +R+V+ W +MI G G
Sbjct: 259 HAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHE 318
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK--------KDVISWNTMLS 236
A +F + + +T ++ A + ++ K D+ + +
Sbjct: 319 AFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVH 378
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y G +++ + +F+++ RNV +WN +IGG A E L F +M EG FP+
Sbjct: 379 MYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG-FFPDAT 437
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T V +LSA AL++ K VH YA G ++ VGNAL+ MYAKCG A VF+ M
Sbjct: 438 TFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDM 496
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+++ TW +ISGLA HG G A SLF +M G +PD T++ IL AC G + E +
Sbjct: 497 VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGAL-EWV 555
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
S A++ +V + +V + A+ G + +A M +E D W ++G
Sbjct: 556 KEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIG 610
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 219/415 (52%), Gaps = 19/415 (4%)
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M GYA+ + + +++QM++ PN T+ +LK+C +L+ G+++H ++++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F++++ V TAL+ +Y +I+ A +F +M ERNV+ WT MI G G A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF- 119
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----------DVISWNTMLSGYA 239
L +R+ + N+ Y+ + N + + + + D+ N ++ YA
Sbjct: 120 LQMQREGFIPNSYT--YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 177
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
+G +++ + +F+ M ER++FSW +IGG A +G E F +M G PN T +
Sbjct: 178 KSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQM-ERGGCLPNLTTYL 236
Query: 300 TVLSACA--RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
++L+A A GAL++ K VH +A G+ ++ VGNALI MYAKCG I++A VF+ M
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
+D+I+WN +I GLA +G G A ++F +M+ G +PD T++ +L G E +
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG-AWEWVK 355
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
A++ +V + V + R G + +A ++ + + W ++G
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIG 409
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/503 (35%), Positives = 277/503 (55%), Gaps = 67/503 (13%)
Query: 43 ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFT 102
A A ++ ++ +F + D ++ + A N + N +L+ Q+ + PN FT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +LKSC + + G+ +H VLK G + +V T
Sbjct: 133 FSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATG---------------------- 166
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+++ Y GD+VSA+ K+FD+
Sbjct: 167 ---------LVDVYAKGGDVVSAQ-------------------------------KVFDR 186
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP++ ++S M++ YA G+VE + LF+ M ER++ SWN +I GYA +G + L F
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+++L EG+ P++ T+V LSAC+++GAL+ +W+HV+ + + + NV V LIDMY+K
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN-AGEMPDGITFIG 401
CG +E AV VFN KD++ WN +I+G AMHG AL LF+EM+ G P ITFIG
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L AC H GLV EG+ F+SM +Y I P+IEHYGC+V LL RAG+L A + +K M ++
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
AD+V+W+++LGSC+++ + L + E L L KN +V+LSNIY +G ++ VA+++
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
M++ G K PG S+IE+ V
Sbjct: 487 NLMKEKGIVKEPGISTIEIENKV 509
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
E+S + +IT A+ + AR +FD + ++++VSWN M +GYAQ+ F ++LF +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 91 -MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+ + P+ T L +C +I AL G +H V + R N+ V T LI++YS
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
++E A VF + +++V W +MI GY G A LF
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 312/653 (47%), Gaps = 120/653 (18%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV---- 66
QL T + ++TSG + I R+I + + YAR +FDKI ++V
Sbjct: 8 QLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATT 67
Query: 67 -----------------------------SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM 97
S+NAM ++ + + LF QMK+L +
Sbjct: 68 MLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFV 127
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA------ 150
P+ FTF VL + I + ++LHC V K G + V AL+ Y + +
Sbjct: 128 PDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNS 187
Query: 151 ---IEAAYKVFGE---------------------------------MDERNVVVWTSMIN 174
+ AA K+F E M + V W +MI+
Sbjct: 188 CVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMIS 247
Query: 175 GYISCG-------------------------DIVSARC---LFELA-------------P 193
GY+ G ++SA LF + P
Sbjct: 248 GYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQP 307
Query: 194 ERDVILW--NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
+L N +++ Y ++EAR++FD+MP KD++SWN +LSG N +EE +F
Sbjct: 308 SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIF 367
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EMP R++ +W +I G A NG E L F +M EG + P D +++C+ LG+L
Sbjct: 368 REMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEG-LEPCDYAYAGAIASCSVLGSL 426
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D + +H G+ ++ VGNALI MY++CG++E A VF +M D ++WN +I+ L
Sbjct: 427 DNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAAL 486
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A HG G A+ L+ +M +PD ITF+ IL AC+H GLV+EG YF +M + Y I P+
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPE 546
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+HY ++DLL RAG +EA + + MP E A IW LL C ++ N+EL A +RL
Sbjct: 547 EDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL 606
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL P+ ++ LSN+Y LG+W +VAR++ MR+ G KK PGCS IEV +V
Sbjct: 607 ELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMV 659
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 33/135 (24%)
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK----------------------- 342
A+L F++ VH + +G++ + N LID Y K
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 343 --------CGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
G I+ A +FN+ M +D +++N +I+ + G AL LF +MK G
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126
Query: 393 MPDGITFIGILCACT 407
+PD TF +L A +
Sbjct: 127 VPDPFTFSSVLGALS 141
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 278/502 (55%), Gaps = 46/502 (9%)
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALRE--GEELHCLVLKNGFRANIFVGTALIEL 144
++ M A P+ +TFP +LK+ V A R G+ +H V+K G N V ++L+ +
Sbjct: 5 VYVGMLARGARPDAYTFPPLLKA-VTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLM 63
Query: 145 YSTGKAIEAAYKVFGEMDER---NVVVWTSMINGY-------ISCGDIVSA--------- 185
Y+ A + R VVW ++I+G+ +SC V
Sbjct: 64 YAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTP 123
Query: 186 -----------------------RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+C+ D+ + N ++ Y + M A +LF+
Sbjct: 124 VTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEG 183
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
M ++ +SW +++SG+ G V++ + LF+ MPER+ SW +I GY G F E L+ F
Sbjct: 184 MEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMF 243
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ M +V ++ T+V+V++ACA+LGAL+ +W +Y +G + + VGNAL+DMY+K
Sbjct: 244 REMQFS-KVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSK 302
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG I+ A+ VF M +D TW +I GLA++G G A+++F+ M E PD +TFIG+
Sbjct: 303 CGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGV 362
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L ACTH GLV++G +F SM Y I P + H+GC++DLL RAG+L EA++ + MP+
Sbjct: 363 LTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRP 422
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
++ IW LL +CRV+ N E+ +LA E L EL+ +N +++LSN+Y RW+DV R++
Sbjct: 423 NSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQ 482
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
+ + G KK PGCS IE+N +
Sbjct: 483 VIMEKGIKKEPGCSLIEMNGTI 504
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 190/403 (47%), Gaps = 53/403 (13%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFD----KITDQNVVSWNAMFNGYA 76
+ VV G+E + ++ ++ A AR + D + D VV WNA+ +G+
Sbjct: 41 VHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAWPARGGDTPVV-WNALISGHR 99
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
++ R F M + +P T+ VL +C K + G ++H V+ +G ++
Sbjct: 100 RSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLK 159
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
VG ALI++Y+ ++AA+++F M+ RN V WTS+I+G++ G + AR LF+ PERD
Sbjct: 160 VGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERD 219
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMP-------------------------------- 224
+ W ++ GY+ EA ++F +M
Sbjct: 220 TVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARI 279
Query: 225 -------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
K D N ++ Y+ G +++ +F+EM R+ F+W +I G A NG E
Sbjct: 280 YMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEE 339
Query: 278 VLDAFKRMLTEGRVF--PNDATIVTVLSACARLGALDFSK--WVHVYAEYNGYQGNVCVG 333
++ F RML RVF P++ T + VL+AC G +D + ++ + Y G NV
Sbjct: 340 AINMFYRML---RVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSY-GIAPNVMHF 395
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
LID+ + G ++ A++ +M + + W T+++ +HG
Sbjct: 396 GCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHG 438
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN---------- 69
Q+ VV SG+ + +I A+ +M A ++F+ + +N VSW
Sbjct: 144 QVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLG 203
Query: 70 ---------------------AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
AM +GY Q R + +F +M+ + FT V+
Sbjct: 204 QVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVT 263
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
+C ++ AL GE + ++G + + FVG AL+++YS +I+ A VF EM R+
Sbjct: 264 ACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFT 323
Query: 169 WTSMING 175
WT++I G
Sbjct: 324 WTAVILG 330
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 287/501 (57%), Gaps = 11/501 (2%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNE--FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
A ++F+K+ ++VV+W + +GYA+ E R + + + + +PN FT VL+ C
Sbjct: 188 AMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVC 247
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVW 169
++ L G+ +H L +K+GF + V +AL E Y A++ A +V+ M E V
Sbjct: 248 ARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVA 307
Query: 170 TSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
S+I G +S G + A +F ++ +I N ++ GY +++KLF++M K +
Sbjct: 308 DSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLT 367
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF---KRM 285
S NTM++ Y+ NG+++E +LF++ ERN +WN ++ GY +NG E L + +R
Sbjct: 368 SLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRF 427
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
L E + +T + ACA L + + +H + YQ NV VG AL+D Y+KCG
Sbjct: 428 LVE----YSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGH 483
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ +A F S+ + ++ W +I+G A HG G+ A+S F M + G +P+ TF+ +L A
Sbjct: 484 LADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSA 543
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C+H GLV+EGL +F SM ++Y I P IEHY C+VDLL R+GR+ EA +F+ +MPI+AD V
Sbjct: 544 CSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGV 603
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
IW LL + + NVEL E A +L L+P + + V LSN+Y GRW +I+ ++
Sbjct: 604 IWGALLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQ 663
Query: 526 DTGFKKLPGCSSIEVNEVVML 546
+K G S IE+N V L
Sbjct: 664 SLELRKDQGFSWIELNNNVHL 684
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 202/458 (44%), Gaps = 79/458 (17%)
Query: 22 QTQVVTSGLEKSDYITPRIITA------CAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ Q T+ LE S P +I+ A+ ++ AR MFD++ + V SWN M +GY
Sbjct: 19 KLQFFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGY 78
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+Q + + L + M N +F L +C + +L G+++H L+ K+G++
Sbjct: 79 SQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFG 138
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
VG+AL+ Y + C I A +FE +
Sbjct: 139 PVGSALLHYY-------------------------------VQCCGIREAEMVFEELRDE 167
Query: 196 DVILWNTIVSGYIDVRNMI-EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+ +LW+ +++GY+ R+MI +A ++F++MP +DV++W T++SGYA D C+R
Sbjct: 168 NHVLWSLMLAGYVQ-RDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED--GCER----- 219
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
LD F M V PN+ T+ VL CARL L
Sbjct: 220 -----------------------ALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVG 256
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI-TWNTIISGLAM 373
K VH +G+ + V +AL + Y +++A V+ SM + +++I GL
Sbjct: 257 KVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVS 316
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
GR A +F+ +++ + + + G + G ++ F+ M++ + +
Sbjct: 317 MGRVKEAGMIFYGLRDKTLISNNLMIKGYAMS----GQFKKSKKLFEKMSLKH-----LT 367
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
M+ + ++ G L EAV + E + V W +++
Sbjct: 368 SLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMM 405
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 41/257 (15%)
Query: 40 IITACAQLKQMTYARKMFDKIT--------------------------------DQNVVS 67
+I A Q ++K+F+K++ ++N V+
Sbjct: 341 MIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVT 400
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN+M +GY N H + L+ M++ + TF ++ ++C + + ++G+ LH +
Sbjct: 401 WNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLA 460
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI--SCGD--IV 183
K ++ N++VGTAL++ YS + A + F + NV WT++INGY CG I
Sbjct: 461 KTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAIS 520
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGY 238
R + + + + ++S + E K F M I+ + ++
Sbjct: 521 RFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLL 580
Query: 239 ANNGDVEECKRLFEEMP 255
+G V+E + +MP
Sbjct: 581 GRSGRVKEAEEFIIQMP 597
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 21/216 (9%)
Query: 22 QTQVVTSGLEKSDY-----ITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
Q Q++ + L K+ Y + ++ ++ + A++ F I NV +W A+ NGYA
Sbjct: 451 QGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYA 510
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANI 135
+ + F M +PN TF VL +C + EG + H + + I
Sbjct: 511 YHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTI 570
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGY-----ISCGDIVSARCLF 189
T +++L ++ A + +M + + V+W +++N + G+ + + LF
Sbjct: 571 EHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVK-LF 629
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
L P VS + + NM R + + K
Sbjct: 630 SLDPNS--------VSALVTLSNMYARRGRWGKKTK 657
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 288/524 (54%), Gaps = 9/524 (1%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
L + + + ++ A + ++ A ++FD++ +++V +WNAM +G +N V L
Sbjct: 98 LHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLG 157
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+M + T VL CV + +H +K+G +FV ALI++Y
Sbjct: 158 RMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG 217
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVS 205
+ A+ VFG M R++V W S+I+ G + +A LF E DV+ ++ S
Sbjct: 218 MLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLAS 277
Query: 206 GYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
+ + A+ + + ++ D+I+ N M+ YA ++ +++F+ +P+R+V
Sbjct: 278 AVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN LI GY NGL E + + M + P T V+VL A + LG L +H
Sbjct: 338 SWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL 397
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+ G +V V LID+YAKCG + A+ +F M + WN II+GL +HG GA A
Sbjct: 398 SIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKA 457
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
LSLF +M+ PD +TF+ +L AC+H GLV++G S+F M Y IVP +HY CMVD
Sbjct: 458 LSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVD 517
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
+L RAG+L EA +F++ MPI+ D+ +W LLG+CR++ NVE+ ++A + L EL+P+N
Sbjct: 518 MLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGY 577
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V++SN+Y +G+W V ++ +R +K PG SS+EV V
Sbjct: 578 YVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSV 621
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
+ +GL Y+T +I A+ ++ A +F+ + ++ WNA+ G + +
Sbjct: 399 IKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKAL 458
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK-NGFRANIFVGTALIEL 144
LF+QM++ + P+ TF +L +C + +G L+ G T ++++
Sbjct: 459 SLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDM 518
Query: 145 YSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELAPE 194
++ A++ M + + VW ++ I+G + G + S + LFEL PE
Sbjct: 519 LGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVAS-QNLFELDPE 573
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 263/498 (52%), Gaps = 41/498 (8%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD--AMPNCFTFPIVLKSCVKI 113
+ D D+ V +N + G HR ++LF M+ P+ +T+P+ LKSC
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
+ L G ++H + G N+FV + I +Y+
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYA--------------------------- 168
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV----RNMIEARKLFD-QMPKKDV 228
CG A +FE RDV+ WN ++SG+ R M R+L Q PK D
Sbjct: 169 ----RCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDA 224
Query: 229 ISWNTMLS--GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
+ ++L G A D+ K +F+EM + + SWN ++ Y NN + E ++ F RM
Sbjct: 225 GTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQ 284
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
+G + P+ T+ TVL +C + AL K +H + ++ + NAL+DMYA CG +
Sbjct: 285 KDG-IEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCL 343
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+ A DVF+SM T+D+++W +IIS HG G A+ LF +M G PD I F+ IL AC
Sbjct: 344 KEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAAC 403
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+H GL++ G YF SM ++ I P++EHY CMVDLL RAG + EA DF+ MPI+ + +
Sbjct: 404 SHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERV 463
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W LLG+CR++ N+++ LA + L L PK +V+LSNIY GRW DV+ ++ M
Sbjct: 464 WGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMES 523
Query: 527 TGFKKLPGCSSIEVNEVV 544
G KKLPG S+ E+ + V
Sbjct: 524 KGIKKLPGVSNAELGDRV 541
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 82/146 (56%)
Query: 45 AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
A+++ + + +FD++ + ++SWNAM Y NE H V LF +M+K P+ T
Sbjct: 237 ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLA 296
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
VL SC +++AL G+ +H ++ + +++ + AL+++Y+ ++ A VF M R
Sbjct: 297 TVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTR 356
Query: 165 NVVVWTSMINGYISCGDIVSARCLFE 190
+VV WTS+I+ Y G A LFE
Sbjct: 357 DVVSWTSIISAYGRHGHGREAIDLFE 382
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 158/380 (41%), Gaps = 73/380 (19%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + GL+ + ++ I+ A+ + A +MF+++ ++VVSWNAM +G+A
Sbjct: 143 QIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAG 202
Query: 80 FHRTVVVLFTQMKKLD-AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ +F ++ L P+ T +L S K E++ +LK F F G
Sbjct: 203 LFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARV----EDI--ALLKGVFDEMRFKG 256
Query: 139 ----TALIELYSTGKAIEAAYKVFGEMD----ERNVVVWTSMINGYISCGDIVS---ARC 187
A++ +Y+ + A ++F M E + V +++ SCG++ + +
Sbjct: 257 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLP---SCGEVSALSLGKR 313
Query: 188 LFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGD 243
+ E+ R ++L N ++ Y + + EAR +FD M +DV+SW +++S Y +G
Sbjct: 314 IHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGH 373
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
E +D F++M +G + P+ V +L+
Sbjct: 374 GR-------------------------------EAIDLFEKMCGQG-LEPDSIAFVAILA 401
Query: 304 ACARLGALDFSKW--------VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
AC+ G LD K H+ + Y ++D+ + G I A D
Sbjct: 402 ACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYA-------CMVDLLGRAGCIREAYDFIMV 454
Query: 356 MDTK-DLITWNTIISGLAMH 374
M K + W ++ +H
Sbjct: 455 MPIKPNERVWGALLGACRIH 474
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 44 CAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF 103
C LK+ AR +FD + ++VVSW ++ + Y ++ R + LF +M P+ F
Sbjct: 340 CGCLKE---ARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAF 396
Query: 104 PIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
+L +C L G+ + + + + +++L I AY M
Sbjct: 397 VAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMP 456
Query: 163 -ERNVVVWTSM-----INGYISCGDIVSARCLFELAPER 195
+ N VW ++ I+ + G +++A L LAP++
Sbjct: 457 IKPNERVWGALLGACRIHSNMDIG-LLAADSLLRLAPKQ 494
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 282/514 (54%), Gaps = 41/514 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + A+ V+ ++ ++ + + +T+P VL++ + EG ++H +K
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GFR + + ++L+E+Y+ ++ A KVF EM +R +V+W M+ YI CG +A L
Sbjct: 75 TGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVAL 134
Query: 189 FE------LAPERDVILW--------------------------------NTIVSGYIDV 210
E P+R ++ N ++ Y
Sbjct: 135 AEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFGFSLPVANALLDMYTKN 194
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ EA K+F QMP++++ISW ++SGYA G +++ + LF + ++++ W +I
Sbjct: 195 GYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACV 254
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G F E L F+ M + RV P+ T+VT+L+ CA +GALD +W+H YAE + +
Sbjct: 255 QHGSFEEALTLFRDMQLQ-RVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDA 313
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+G ALI+MY+KCG ++ ++ +F M +D W II GLA +G+ + AL LF EM+ +
Sbjct: 314 VLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQRS 373
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PDGITFIG+L AC H GLV+EG +FQ+M Y I P+IEHY C+V+LL AG L E
Sbjct: 374 KTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLYE 433
Query: 451 AVDFVKRMPIEADAV-IWANLLGSCRVYKNVELAELALERLTELE-PKNPANFVMLSNIY 508
A ++ MP+ D + ++ LL +C+ Y NVE++E +R+ + + +NP V++SN+Y
Sbjct: 434 AEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNVY 493
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
RW++ R++ M KK GCS IEV E
Sbjct: 494 ATASRWEESIRVRSKMTHPAVKKTAGCSMIEVKE 527
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 41/333 (12%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
++ V +G Y ++ L ++ +ARK+FD++ + +V WN M Y +
Sbjct: 66 RKVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRC 125
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
V L +M++ A P+ T + +C + L G + + F ++ V
Sbjct: 126 GRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAY-MDGVFGFSLPVA 184
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ +E A K+F +M ERN++ WT +++GY G + AR LF ++D+I
Sbjct: 185 NALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLI 244
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQM------PKK-------------------------- 226
LW +++ + + EA LF M P K
Sbjct: 245 LWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYA 304
Query: 227 -------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
D + ++ Y+ G V++ ++F M R+ +W +I G A NG + L
Sbjct: 305 EGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKAL 364
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ F+ M + P+ T + VL+AC G +D
Sbjct: 365 ELFEEM-QRSKTKPDGITFIGVLNACCHGGLVD 396
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 134/322 (41%), Gaps = 35/322 (10%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ A Q+ AR +F + T ++++ W AM N Q+ + LF M+ P+
Sbjct: 218 LVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPD 277
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
FT +L C I AL +GE +H + + +GTALIE+YS ++ + ++FG
Sbjct: 278 KFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFG 337
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M R+ WT++I G + G A LFE ++
Sbjct: 338 RMQGRDAAAWTAIICGLATNGQASKALELFE---------------------------EM 370
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYANNGL 274
K D I++ +L+ + G V+E +R F+ M E + ++ L+ + GL
Sbjct: 371 QRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGL 430
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+E + M P +L+AC G ++ S+ + N V
Sbjct: 431 LYEAEKLIRDMPVNNDTMP---LFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNV 487
Query: 335 ALIDMYAKCGIIENAVDVFNSM 356
+ ++YA E ++ V + M
Sbjct: 488 LMSNVYATASRWEESIRVRSKM 509
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 302/608 (49%), Gaps = 86/608 (14%)
Query: 16 KHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
K LH QI Q+ SG K ++ ++I A + A+++FDK+ NV +W A+F
Sbjct: 9 KSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIF 68
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y ++ + V + MK D +P+ + FP VL++C ++ G +H V+ G
Sbjct: 69 GFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCE 128
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------------ 180
+N+ V +LI++Y +A VF EM+ER++ W SMI+GY+S G
Sbjct: 129 SNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCM 188
Query: 181 -------DIVS------ARC----------LFELAPERDVILWNTIVSGYIDVRNMIEAR 217
D+V+ A C + + + ++I W T++S Y + +
Sbjct: 189 RLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSL 248
Query: 218 KLFDQMPKKDVISWN------------------------------------------TML 235
++F M ++V+S + +L
Sbjct: 249 RVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALL 308
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ YA G +++ +FE M + ++ +WN +I G+ L + ++ F+ M + +
Sbjct: 309 TMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREM-QRMDIKNDQ 367
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
TI T+L C L + +H Y + V V NA+I MY KCG + +A +F
Sbjct: 368 TTISTILPVCD----LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFC 423
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
SM KD+++WNT+I G MHG G AL L EM +G P+ TF +L AC+H GLV+E
Sbjct: 424 SMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDE 483
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G F+SM DYSI P++EHY C+VD+LARAG+ A+AV F+ +MP+E D IW LL +C
Sbjct: 484 GFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAAC 543
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R Y+N++ LA E+L +EPK ++V LSNIY GRW D R++ + G K G
Sbjct: 544 RAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSG 603
Query: 535 CSSIEVNE 542
S IE +
Sbjct: 604 QSLIETRD 611
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 201/466 (43%), Gaps = 88/466 (18%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L+ C + +L G+++H + +G+ + F+ T LI++Y+ + +A ++F +M + N
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 166 VVVWTSMINGYISCG---------------DIVSARCLFE---------------LAPER 195
V WT++ Y+ G D++ +F + +
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 196 DVI---------LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG---- 242
DVI + N+++ Y+ N AR +F++M ++D+ SWN+M+SGY +NG
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 243 --DVEECKRL-----------------------------FEEMPERNVFSWNGLIGGYAN 271
++ C RL +++ + N+ SW LI Y+
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSK 240
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV- 330
G L F+ M+ V P+ + +VL +C +GAL K +H Y + N
Sbjct: 241 IGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYG--TKMETNTV 298
Query: 331 ---CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
G AL+ MYAKCG I++A++VF MD D++TWN +I G G A+ F EM
Sbjct: 299 FYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREM 358
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ D T IL C ++ G + ++ + + ++ + + G
Sbjct: 359 QRMDIKNDQTTISTILPVCD----LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGC 414
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+ A MP D V W ++G ++ + + AL+ L E+
Sbjct: 415 VRSAYTIFCSMP-NKDVVSWNTMIGGFGMHGH---GQAALKLLKEM 456
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 11/225 (4%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+L C+ L +L K +H +G+ + + LI MYA C + +A +F+ M +
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+ W I HG + + MK + +PD F +L ACT + E G+ +
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGI-WIH 119
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
+ ++ ++D+ + G A + M E D W +++ Y +
Sbjct: 120 KDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEME-ERDLFSWNSMISG---YVSN 175
Query: 481 ELAELALE-----RLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
LA+LA+E RL EP + + L + Y +GR+ + +
Sbjct: 176 GLADLAVELLNCMRLDGFEP-DVVTWNTLMDAYCQMGRFDEAWEV 219
>gi|222636781|gb|EEE66913.1| hypothetical protein OsJ_23761 [Oryza sativa Japonica Group]
Length = 595
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 273/497 (54%), Gaps = 53/497 (10%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS---- 146
M+ PN FTF +L++C + R +H +++ GF +++FV AL+++Y
Sbjct: 1 MRAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCGG 60
Query: 147 -TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV- 204
G + AA +VF EM +R+VV W S++ Y+S GD A FE PER+V+ WNT+V
Sbjct: 61 GGGGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTVVA 120
Query: 205 ----------SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
SGY ++ AR +FD+M +KDV+SW M+S YA GD++ LF+ M
Sbjct: 121 GNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVVSWTAMVSAYAKIGDLDTVNELFDHM 180
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P +N+ SWN +I GY +N + E L F+ M+ EGR P++AT+V+V+SACA+LG++++
Sbjct: 181 PVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYC 240
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
W+ + + V +GNALIDM+AKCG + A +F M+T+ +ITW T+ISG A +
Sbjct: 241 NWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFYKMETRCIITWTTMISGFAFN 300
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G AL +++ M G D FI L AC H GL++EG S F M Y+I P++EH
Sbjct: 301 GLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPRMEH 360
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCMVDLL RA EL E +++TELE
Sbjct: 361 YGCMVDLLGRA-----------------------------------ELIEYVSKKITELE 385
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV--MLGCLSRE 552
P N + V++SN GRW V + +MR+ G +K+PG SSI+V V L +R
Sbjct: 386 PFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVGSEVHEFLAKDTRH 445
Query: 553 LDRKSIVRAEANMIKLL 569
RK I ++ L+
Sbjct: 446 KRRKEIYETVDGLMALM 462
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 165/388 (42%), Gaps = 86/388 (22%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD++ D++VVSWN++ Y + + F +AMP ++ V
Sbjct: 69 ARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFF------EAMPE--------RNVVS 114
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
N + G N N+ +I Y+ +EAA VF MD+++VV WT+M
Sbjct: 115 WNTVVAG---------NAVSWNL-----MISGYAMSGDVEAARSVFDRMDQKDVVSWTAM 160
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFD----------- 221
++ Y GD+ + LF+ P ++++ WN +++GY EA + F
Sbjct: 161 VSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPD 220
Query: 222 ------------QMPKKDVISW-----------------NTMLSGYANNGDVEECKRLFE 252
Q+ + +W N ++ +A GDV + +F
Sbjct: 221 EATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESIFY 280
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+M R + +W +I G+A NGL + L + M EG V +D + L+ACA G L
Sbjct: 281 KMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREG-VQLDDTVFIAALAACAHGGLLQ 339
Query: 313 --FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE------NAVDVFNSMDTKDLITW 364
+S + + YN Q + ++D+ + +IE ++ FNS ++
Sbjct: 340 EGWSIFNEMVERYN-IQPRMEHYGCMVDLLGRAELIEYVSKKITELEPFNS-------SY 391
Query: 365 NTIISGL-AMHGRGAGALSLFHEMKNAG 391
++S A+ GR G + M+N G
Sbjct: 392 QVLVSNCSALEGRWDGVIDARTSMRNWG 419
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA--M 97
+++A A++ + ++FD + +N+VSWNAM GY N + + F Q+ L+
Sbjct: 160 MVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTF-QLMMLEGRFR 218
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ T V+ +C ++ ++ + + K+ + +G ALI++++ + A +
Sbjct: 219 PDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAESI 278
Query: 158 FGEMDERNVVVWTSMINGY 176
F +M+ R ++ WT+MI+G+
Sbjct: 279 FYKMETRCIITWTTMISGF 297
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 273/493 (55%), Gaps = 45/493 (9%)
Query: 94 LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
L P+ ++ + + + N ++ G++ H ++ +G + N F+ ++ +Y++ +++
Sbjct: 71 LQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDS 130
Query: 154 AYKVFGEMDERNVVVWTSMINGYI-----------------------------------S 178
A VF +D + +++ S+I Y S
Sbjct: 131 AVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKS 190
Query: 179 CGD---IVSARCL----FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
C D + RC+ + E D + +++ Y+ + +ARKLFD+M +D+ SW
Sbjct: 191 CADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASW 250
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG-R 290
N +++GY G++ + LFE M RN+ SW +I GY NG + L F ML +G
Sbjct: 251 NALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE 310
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ PN TIV+VL ACA+ AL+ + +H +A G N V AL MYAKC + A
Sbjct: 311 MKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEAR 370
Query: 351 DVFN--SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
F+ + + K+LI WNT+I+ A HG G A+S+F M AG PD +TF+G+L C+H
Sbjct: 371 CCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSH 430
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
GL++ GL++F M +S+ P++EHY C+VDLL RAGRL EA + + +MP++A +W
Sbjct: 431 SGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWG 490
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
LL +CR ++N+E+AELA RL LEP N N+V+LSN+Y + G W++V +++ ++ G
Sbjct: 491 ALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQG 550
Query: 529 FKKLPGCSSIEVN 541
KK PGCS IE+N
Sbjct: 551 MKKSPGCSWIEIN 563
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 183/408 (44%), Gaps = 57/408 (13%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q Q+V GL+ + ++ +++ A + A +FD+I + + + +N++ Y ++
Sbjct: 97 QQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRH 156
Query: 79 ---EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + +M L + + FT P VLKSC ++ + G +H L+ G +
Sbjct: 157 GXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDF 216
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+VG +LI++Y I A K+F +M R++ W ++I GY+ G+I A LFE R
Sbjct: 217 YVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHR 276
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQM------PKKDVISWNTMLSGYANNGDVEECKR 249
+++ W ++SGY +A LFD+M K + ++ ++L A + +E +R
Sbjct: 277 NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRR 336
Query: 250 L-----------------------------------FEEMPE--RNVFSWNGLIGGYANN 272
+ F+ + + +N+ +WN +I YA++
Sbjct: 337 IHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASH 396
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQ 327
G E + F+ ML G V P+ T + +LS C+ G +D F+ +++ +
Sbjct: 397 GCGVEAVSIFENMLRAG-VQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVE 455
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAMH 374
CV +D+ + G + A ++ + M + + W +++ H
Sbjct: 456 HYACV----VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 499
>gi|356518597|ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Glycine max]
Length = 535
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 281/525 (53%), Gaps = 39/525 (7%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
N W + Q R ++ + Q + + + + P++ K+C + L + LH
Sbjct: 11 NPSHWFCSIRNHIQQGSLRCALLAYKQTRH-EGVYDSSVAPLLFKACASLPFLHYVKALH 69
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K G +++ +GTAL+ YS + A +F M ERNVV W +MI+GY+ GD
Sbjct: 70 AESIKAGSESDVIIGTALLTTYSKCGVVRDARNLFDTMPERNVVTWNAMISGYLRNGDTE 129
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK--KDVISWNTMLSGYANN 241
SA +FE + + W+ ++ G+ ++ AR+LFD++P K+V++W M+ GYA
Sbjct: 130 SAYLVFEKMQGKTQVTWSQMIGGFARNGDIATARRLFDEVPHELKNVVTWTVMVDGYARI 189
Query: 242 GDVEECKRLFEEMPERNVFSW-------------------------------NGLIGGYA 270
G++E + +FE MPERN F W N +I GY
Sbjct: 190 GEMEAAREVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAVFDWVPVRNLEIWNSMIAGYV 249
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
NG + L AF+ M EG P++ T+V+VLSACA+LG LD K +H E+ G N
Sbjct: 250 QNGFGEKALLAFEGMGAEG-FEPDEFTVVSVLSACAQLGHLDVGKQIHHMIEHKGIVVNP 308
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V + L+DMYAKCG + NA VF K++ WN +ISG A++G+ + L F M+ +
Sbjct: 309 FVLSGLVDMYAKCGDLVNARLVFEGFTEKNIFCWNAMISGFAINGKCSEVLEFFGRMEES 368
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PDGITF+ +L AC H GLV E L M Y I I+HYGCMVDLL RAGRL +
Sbjct: 369 NIRPDGITFLTVLSACAHRGLVTEALEVISKME-GYRIEIGIKHYGCMVDLLGRAGRLKD 427
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF--VMLSNIY 508
A D + RMP++ + + +LG+CR++ ++ +AE ++ + E EP A+ V+LSNIY
Sbjct: 428 AYDLIVRMPMKPNDTVLGAMLGACRIHSDMNMAEQVMKLICE-EPVTGASSHNVLLSNIY 486
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
+W+ R+K D G +++PGCSSI ++ C S L
Sbjct: 487 AASEKWEKAERMKRITVDGGSQRIPGCSSIIFSDSCGFKCTSPTL 531
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 53/389 (13%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K LH + + +G E I ++T ++ + AR +FD + ++NVV+WNAM
Sbjct: 62 LHYVKALH---AESIKAGSESDVIIGTALLTTYSKCGVVRDARNLFDTMPERNVVTWNAM 118
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY +N + ++F +M+ + T+ ++ + + L V
Sbjct: 119 ISGYLRNGDTESAYLVFEKMQGKTQV----TWSQMIGGFARNGDIATARRLFDEVPHE-- 172
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
N+ T +++ Y+ +EAA +VF M ERN VW+SMI+GY G++ A +F+
Sbjct: 173 LKNVVTWTVMVDGYARIGEMEAAREVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAVFDW 232
Query: 192 APERDVILWNTIVSGYID-------------------------VRNMIEA---------- 216
P R++ +WN++++GY+ V +++ A
Sbjct: 233 VPVRNLEIWNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEFTVVSVLSACAQLGHLDVG 292
Query: 217 RKLFDQMPKKDVISWNTMLSG----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+++ + K ++ +LSG YA GD+ + +FE E+N+F WN +I G+A N
Sbjct: 293 KQIHHMIEHKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGFTEKNIFCWNAMISGFAIN 352
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G EVL+ F RM E + P+ T +TVLSACA G + ++ + V ++ GY+ + +
Sbjct: 353 GKCSEVLEFFGRM-EESNIRPDGITFLTVLSACAHRGLV--TEALEVISKMEGYRIEIGI 409
Query: 333 GN--ALIDMYAKCGIIENAVDVFNSMDTK 359
+ ++D+ + G +++A D+ M K
Sbjct: 410 KHYGCMVDLLGRAGRLKDAYDLIVRMPMK 438
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 304/550 (55%), Gaps = 16/550 (2%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T A S LE H I ++ L K+ ++ ++ A+ + AR++F+ + D+
Sbjct: 436 STCAVSHDLEMGSQFHSI---IIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR 492
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ VSWN + GY Q+E LF +M + + LK+C ++ L +G+++H
Sbjct: 493 DNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVH 552
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
CL +K G + G++LI++YS IE A KVF M E +VV ++I GY S ++
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNNLE 611
Query: 184 SARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TM 234
A LF+ + V I + TIV ++ + Q+ K S ++
Sbjct: 612 EAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISL 671
Query: 235 LSGYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
L Y N+ + E LF E+ +++ W G++ G++ NG + E L +K M +G P
Sbjct: 672 LGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG-ALP 730
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ AT VTVL C+ L +L + +H + + + N LIDMYAKCG ++++ VF
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVF 790
Query: 354 NSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
+ M + ++++WN++I+G A +G AL +F M+ + MPD ITF+G+L AC+H G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+G F+ M Y I +++H CMVDLL R G L EA DF++ ++ DA +W++LLG
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CR++ + E+A ERL ELEP+N + +V+LSNIY GRW++ ++ AMRD G KK+
Sbjct: 911 ACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKV 970
Query: 533 PGCSSIEVNE 542
PG S I+V +
Sbjct: 971 PGYSWIDVGQ 980
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 218/460 (47%), Gaps = 47/460 (10%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ--- 77
+ ++ + G++ + I+ A+ Q++YA K F+ + +++V +WN+M + Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQ 140
Query: 78 -NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+ R+ V LF + PN FTF IVL + + + G ++HC ++K G N +
Sbjct: 141 PGKVLRSFVSLFENL----IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----A 192
G AL+++Y+ + A +VF + + N V WT + +GY+ G A +FE
Sbjct: 197 CGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEG 256
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
D + + T+++ YI + + +AR LF +MP DV++WN M+SG+ G F
Sbjct: 257 HRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFL 316
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M + +V S +G +VLSA + LD
Sbjct: 317 NMRKSSVKSTRSTLG--------------------------------SVLSAIGIVANLD 344
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
VH A G N+ VG++L+ MY+KC +E A VF +++ ++ + WN +I G A
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYA 404
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+G + LF +MK++G D TF +L C +E G S F S+ + + +
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMG-SQFHSIIIKKKLTKNL 463
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+VD+ A+ G L +A + M + D V W ++G
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFEHM-CDRDNVSWNTIIG 502
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 231/479 (48%), Gaps = 49/479 (10%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + + GL + Y+ +++ ++ ++M A K+F+ + ++N V WNAM GYA N
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGE 408
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V+ LF MK + FTF +L +C + L G + H +++K N+FVG A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNA 468
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI----------------SCGDIVS 184
L+++Y+ A+E A ++F M +R+ V W ++I GY+ SCG +
Sbjct: 469 LVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSD 528
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYAN 240
CL + + +V + + +++ K + + + ++++ Y+
Sbjct: 529 GACL------------ASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSK 576
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G +E+ +++F MPE +V S N LI GY+ N L E + F+ MLT+G V P++ T T
Sbjct: 577 CGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKG-VNPSEITFAT 634
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQG-NVCVGNALIDMYAKCGIIENAVDVFNSMDT- 358
++ AC + +L H G+ +G +L+ +Y + A +F+ + +
Sbjct: 635 IVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSP 694
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
K ++ W ++SG + +G AL + EM++ G +PD TF+ +L C+ + + EG +
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 419 FQSMAMDYSIVPQIEH------YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+S++ + H ++D+ A+ G + + M ++ V W +L+
Sbjct: 755 -------HSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 213/441 (48%), Gaps = 12/441 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I L ++ AR +F ++ +VV+WN M +G+ + + F M+K
Sbjct: 267 VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKST 326
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL + + L G +H +K G +NI+VG++L+ +YS + +EAA KVF
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIE 215
++ERN V+W +MI GY G+ LF D + +++S ++
Sbjct: 387 ALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEM 446
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ + K K++ N ++ YA G +E+ +++FE M +R+ SWN +IGGY
Sbjct: 447 GSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQ 506
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ E D F RM + G + + A + + L AC + L K VH + G +
Sbjct: 507 DENESEAFDLFMRMNSCG-IVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLH 565
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
G++LIDMY+KCGIIE+A VF+SM +++ N +I+G + + A+ LF EM G
Sbjct: 566 TGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKG 624
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG-CMVDLLARAGRLAE 450
P ITF I+ AC + G + F + + + E+ G ++ L + R+AE
Sbjct: 625 VNPSEITFATIVEACHKPESLTLG-TQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAE 683
Query: 451 AVDFVKRMPIEADAVIWANLL 471
A + V+W ++
Sbjct: 684 ACALFSELSSPKSIVLWTGMM 704
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 134/296 (45%), Gaps = 32/296 (10%)
Query: 213 MIEARKLFDQMPKKDVISW----------------------NTMLSGYANNGDVEECKRL 250
+ ++RK+FD+MP + ++ N ++ YA V ++
Sbjct: 58 LFKSRKVFDEMPHRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F + E++V +WN ++ Y++ G +VL +F + E +FPN T VLS AR
Sbjct: 118 FNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLF-ENLIFPNKFTFSIVLSTSARETN 175
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
++F + +H G + N G AL+DMYAKC + +A VF+ + + + W + SG
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSG 235
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
G A+ +F M+ G PD + F+ ++ +G +++ F M P
Sbjct: 236 YVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMP-----SP 290
Query: 431 QIEHYGCMVDLLARAGRLAEAVDF---VKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ + M+ + G A+++ +++ +++ ++L + + N++L
Sbjct: 291 DVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/477 (38%), Positives = 251/477 (52%), Gaps = 51/477 (10%)
Query: 122 LHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+HCL+ K G A + TAL+ Y A +F EM +++V T+M + G
Sbjct: 32 IHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSG 91
Query: 181 DIVSARCLFE------------------------------LAPER-------------DV 197
A LF+ +P R DV
Sbjct: 92 QAAQALDLFQDMIADGFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDV 151
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ ++ Y + M AR++FD MP K I+WNTM+ Y N D+E RLF MP R
Sbjct: 152 FVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRR 211
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--VFPNDATIVTVLSACARLGALDFSK 315
+V SWN +I GY G E L F++M++ V PN T+ TVLSACA G L+
Sbjct: 212 DVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGI 271
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
WVH+Y + N N + LIDMYAKCG I+ A+ VF K DL +W T+I GLAMH
Sbjct: 272 WVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMH 331
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
GR L +F M+++G PD +TF+G+L AC H GLV+EGL +F SM Y I P+IEH
Sbjct: 332 GRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEH 391
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCM+DLL R GRL EA ++ MP++ + VIW L +C+V+ +VEL E+A +T L+
Sbjct: 392 YGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAAEVTRLD 451
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI----EVNEVVMLG 547
P +P VM+S++Y W +AR + M KK PGCSS+ EV+E V G
Sbjct: 452 PDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVALDGEVHEFVAGG 508
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 52/395 (13%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
L ++ +++A L + +AR +FD++ +Q++V+ AM +A + + LF
Sbjct: 42 LHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQ 101
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINAL----REGEELHCLVLKNGFRANIFVGTALIELY 145
M MP+ +VL +C + G +H ++ G ++FV T LI +Y
Sbjct: 102 DMIADGFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVY 161
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ A +VF M ++ + W +M++ Y+ DI +A LF P RDV+ WNT+++
Sbjct: 162 GERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIA 221
Query: 206 GYIDVRNMIEARKLFDQM--PKKDVISWN-----TMLSG--------------------- 237
GY V EA LF QM P + N T+LS
Sbjct: 222 GYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQ 281
Query: 238 --------------YANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF 282
YA G +++ ++FE+ P +R+++SW +I G A +G +VL F
Sbjct: 282 MNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMF 341
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMY 340
M G + P+D T V VL+ACA G +D H Y+ Y+ + + +ID+
Sbjct: 342 SMMQDSG-MCPDDVTFVGVLNACAHGGLVD-EGLHHFYSMQEKYRITPKIEHYGCMIDLL 399
Query: 341 AKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ G + A + +M K +++ W +S +H
Sbjct: 400 GRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVH 434
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 115/293 (39%), Gaps = 49/293 (16%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ +V G+E +++ +I + +MT AR++FD + ++ ++WN M + Y +N+
Sbjct: 138 VHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKD 197
Query: 81 HRTVVVLFTQMKKLDAM----------------------------------PNCFTFPIV 106
LF M + D + PN T V
Sbjct: 198 IEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTV 257
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERN 165
L +C L G +H + KN N + LI++Y+ +I+ A +VF + +R+
Sbjct: 258 LSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRD 317
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYID--VRNMI 214
+ WT++I G G +F + + + +L G +D + +
Sbjct: 318 LYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFY 377
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLI 266
++ + PK + + M+ G + E R+ + MP + N+ W +
Sbjct: 378 SMQEKYRITPK--IEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFL 428
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 294/528 (55%), Gaps = 7/528 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ T VV +GL+K+ ++ +I + + AR +FDK ++VV+WN+M +GYA N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F M+ + +F V+K C + LR E+LHC V+K GF + + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+ YS A+ A ++F E+ NVV WT+MI+G++ A LF + V
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT----MLSGYANNGDVEECKRLFEEM 254
S + +I ++ Q+ K + +T +L Y G VEE ++F +
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA-LDF 313
++++ +W+ ++ GYA G + F LT+G + PN+ T ++L+ CA A +
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K H +A + ++CV +AL+ MYAK G IE+A +VF KDL++WN++ISG A
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG+ AL +F EMK DG+TFIG+ ACTH GLVEEG YF M D I P E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H CMVDL +RAG+L +A+ ++ MP A + IW +L +CRV+K EL LA E++ +
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 693
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+P++ A +V+LSN+Y + G W++ A+++ M + KK PG S IEV
Sbjct: 694 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 741
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 224/492 (45%), Gaps = 26/492 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ Q + G + ++ + RK+FD++ ++NVV+W + +GYA+N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ V+ LF +M+ PN FTF L + G ++H +V+KNG I V
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+LI LY + A +F + + ++VV W SMI+GY + G + A +F V
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 199 LWNTIVSGYIDV-RNMIEARKLFDQMPKKDVISW---------NTMLSGYANNGDVEECK 248
L + + I + N+ E R F + V+ + ++ Y+ + +
Sbjct: 293 LSESSFASVIKLCANLKELR--FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 249 RLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
RLF+E+ NV SW +I G+ N E +D F M +G V PN+ T +L+A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPV 409
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+ + VH Y+ + VG AL+D Y K G +E A VF+ +D KD++ W+ +
Sbjct: 410 ISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL--CACTHMGLVEEGLSYFQSMAMD 425
++G A G A+ +F E+ G P+ TF IL CA T+ + + F A+
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG--KQFHGFAIK 523
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ + ++ + A+ G + A + KR E D V W +++ Y A
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG---YAQHGQAMK 579
Query: 486 ALERLTELEPKN 497
AL+ E++ +
Sbjct: 580 ALDVFKEMKKRK 591
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 213/482 (44%), Gaps = 83/482 (17%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +FDK ++ S+ ++ G++++ + LF + +L +C F VLK
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ G +LHC +K GF ++ VGT+L++ Y G + KVF EM ERNVV WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 173 INGYI--SCGDIV------------------SARCLFELAPE------------------ 194
I+GY S D V A L LA E
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 195 -RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG-DVEECKRLFE 252
+ + + N++++ Y+ N+ +AR LFD+ K V++WN+M+SGYA NG D+E
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL----- 280
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
G+F+ + + R+ ++++ +V+ CA L L
Sbjct: 281 --------------------GMFYSMRLNYVRL--------SESSFASVIKLCANLKELR 312
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGL 371
F++ +H G+ + + AL+ Y+KC + +A+ +F + ++++W +ISG
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ A+ LF EMK G P+ T+ IL A + ++ + Q + +Y
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSST 429
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+ ++D + G++ EA + + D V W+ +L Y E A++
Sbjct: 430 VG--TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG---YAQTGETEAAIKMFG 483
Query: 492 EL 493
EL
Sbjct: 484 EL 485
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 280/527 (53%), Gaps = 70/527 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITAC--AQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
H H ++T + S R+I C + + YA ++ +I + N+ +NA+ G
Sbjct: 37 HAHMLRTHLFFDVFAAS-----RLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRG 91
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ +E + + + +P+ T P ++K+C ++
Sbjct: 92 CSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLE-------------------- 131
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
A + + + G+AI+ + E
Sbjct: 132 ----NAPMGMQTHGQAIKHGF--------------------------------------E 149
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
+D + N++V Y V ++ AR +F +M + DV+SW M++GY GD + + LF+ M
Sbjct: 150 QDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRM 209
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
PERN+ +W+ +I GYA N F + ++ F+ + EG V N+ +V V+S+CA LGAL
Sbjct: 210 PERNLVTWSTMISGYARNNCFEKAVETFEALQAEG-VVANETVMVGVISSCAHLGALAMG 268
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ H Y N N+ +G A++DMYA+CG +E AV VF + KD++ W +I+GLAMH
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
G AL F EM G +P ITF +L AC+H G+VE GL F+SM D+ + P++EH
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEH 388
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELE 494
YGCMVDLL RAG+L +A FV +MP++ +A IW LLG+CR++KNVE+ E + L E++
Sbjct: 389 YGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQ 448
Query: 495 PKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
P+ ++V+LSNIY +WKDV ++ M+D G +K PG S IE++
Sbjct: 449 PEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEID 495
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 45/301 (14%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QLE Q Q + G E+ Y+ ++ A + + AR +F ++ +VVSW
Sbjct: 129 QLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTC 188
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLD-----------AMPNCFTFPI-------------- 105
M GY + ++ LF +M + + A NCF +
Sbjct: 189 MIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVAN 248
Query: 106 ------VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
V+ SC + AL GE+ H V++N N+ +GTA++++Y+ +E A VF
Sbjct: 249 ETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFE 308
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE----RDVILWNTIVSGYIDVRNMI 214
++ E++V+ WT++I G G A F E+A + RD+ T V M+
Sbjct: 309 QLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITF--TAVLTACSHAGMV 366
Query: 215 E-ARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIG 267
E ++F+ M + + + M+ G + + ++ +MP + N W L+G
Sbjct: 367 ERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLG 426
Query: 268 G 268
Sbjct: 427 A 427
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 310/555 (55%), Gaps = 32/555 (5%)
Query: 12 LETTKHLHQIQ----TQVVTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVV 66
L+ LH +Q G K++ Y+ +I A+ + AR+MF+++ D+++
Sbjct: 140 LKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLA 199
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW A+ G N ++LF +M+ MP+ +L +C ++ A++ G L
Sbjct: 200 SWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCA 259
Query: 127 LKNGFRANIFVGTALIELY-STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+++GF ++++V A+I++Y G +EA ++VF M +VV W+++I GY S
Sbjct: 260 VRSGFESDLYVSNAVIDMYCKCGDPLEA-HRVFSHMVYSDVVSWSTLIAGY-------SQ 311
Query: 186 RCLFE-----------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVIS 230
CL++ + + I+ +++ + + + +++ + + K+ DV+
Sbjct: 312 NCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVV 371
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML-TEG 289
+ ++ YAN G ++E + +FE ++++ WN +I GY G F F+R+ E
Sbjct: 372 GSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH 431
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
R PN T+V++L C ++GAL K +H Y +G NV VGN+LIDMY+KCG +E
Sbjct: 432 R--PNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELG 489
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
VF M +++ T+NT+IS HG+G L+ + +MK G P+ +TFI +L AC+H
Sbjct: 490 EKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHA 549
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
GL++ G + SM DY I P +EHY CMVDL+ RAG L A F+ RMP+ DA ++ +
Sbjct: 550 GLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGS 609
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LLG+CR++ VEL EL ER+ +L+ + ++V+LSN+Y RW+D+++++ ++D G
Sbjct: 610 LLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGL 669
Query: 530 KKLPGCSSIEVNEVV 544
+K PG S I+V +
Sbjct: 670 EKKPGSSWIQVGHCI 684
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 219/481 (45%), Gaps = 13/481 (2%)
Query: 33 SDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMK 92
S +++ + +A F + + +++WNA+ G + + M
Sbjct: 66 SSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSML 125
Query: 93 KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
+ P+ +T+P+VLK+C ++AL+ G +H + +AN++V A+I++++ ++E
Sbjct: 126 QHGVTPDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVE 184
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A ++F EM +R++ WT++I G + G+ + A LF ++ + IV+ +
Sbjct: 185 DARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACG 244
Query: 213 MIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+EA KL + + D+ N ++ Y GD E R+F M +V SW+
Sbjct: 245 RLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWST 304
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
LI GY+ N L+ E + M+ G + N +VL A +L L K +H +
Sbjct: 305 LIAGYSQNCLYQESYKLYIGMINVG-LATNAIVATSVLPALGKLELLKQGKEMHNFVLKE 363
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G +V VG+ALI MYA CG I+ A +F KD++ WN++I G + G A F
Sbjct: 364 GLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTF 423
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+ A P+ IT + IL CT MG + +G + + ++D+ ++
Sbjct: 424 RRIWGAEHRPNFITVVSILPICTQMGALRQG-KEIHGYVTKSGLGLNVSVGNSLIDMYSK 482
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
G L K+M + + + ++ +C + E E++ E E P +
Sbjct: 483 CGFLELGEKVFKQMMVR-NVTTYNTMISACGSHGQGEKGLAFYEQMKE-EGNRPNKVTFI 540
Query: 505 S 505
S
Sbjct: 541 S 541
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 205/439 (46%), Gaps = 20/439 (4%)
Query: 82 RTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF------RANI 135
+ +L T ++ ++P FT + N L E LH L+L GF ++
Sbjct: 10 HAIAMLITFTRQQHSLPIHFTVTSFHRLKSPPN-LHEARTLHALLLVLGFFQPTCPHSSS 68
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFEL 191
F + L+ +Y +++ A+ F + + ++ W +++ G ++ G A + +
Sbjct: 69 F-ASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQH 127
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQM---PKKDVISWNTMLSGYANNGDVEECK 248
D + ++ + + R + + M K +V ++ +A G VE+ +
Sbjct: 128 GVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDAR 187
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
R+FEEMP+R++ SW LI G NG E L F++M +EG + P+ + ++L AC RL
Sbjct: 188 RMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEG-LMPDSVIVASILPACGRL 246
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
A+ + V A +G++ ++ V NA+IDMY KCG A VF+ M D+++W+T+I
Sbjct: 247 EAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLI 306
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+G + + + L+ M N G + I +L A + L+++G + + +
Sbjct: 307 AGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQG-KEMHNFVLKEGL 365
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
+ + ++ + A G + EA + + + D ++W +++ + + E A
Sbjct: 366 MSDVVVGSALIVMYANCGSIKEA-ESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFR 424
Query: 489 RLTELEPKNPANFVMLSNI 507
R+ E + NF+ + +I
Sbjct: 425 RIWGAEHR--PNFITVVSI 441
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 186/377 (49%), Gaps = 13/377 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+LE K +Q V SG E Y++ +I + A ++F + +VVSW+
Sbjct: 245 RLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWST 304
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY+QN ++ L+ M + N VL + K+ L++G+E+H VLK G
Sbjct: 305 LIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEG 364
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----R 186
+++ VG+ALI +Y+ +I+ A +F +++++VW SMI GY GD SA R
Sbjct: 365 LMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFR 424
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNG 242
++ + I +I+ + + + +++ + K +V N+++ Y+ G
Sbjct: 425 RIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCG 484
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+E +++F++M RNV ++N +I ++G + L +++M EG PN T +++L
Sbjct: 485 FLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNR-PNKVTFISLL 543
Query: 303 SACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TK 359
SAC+ G LD W+ + N Y + N+ + ++D+ + G ++ A M T
Sbjct: 544 SACSHAGLLD-RGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTP 602
Query: 360 DLITWNTIISGLAMHGR 376
D + +++ +H +
Sbjct: 603 DANVFGSLLGACRLHNK 619
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 291/538 (54%), Gaps = 20/538 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ GL + ++T A+ + ARK+FD ++ + +SWNAM G+ +N
Sbjct: 216 EVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENH 275
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M + + PN T V + ++ L +E+H L +K GF ++
Sbjct: 276 ECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCN 335
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI++YS+ + A VF M+ R+ + WT+MI+GY G A ++ L +V
Sbjct: 336 SLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSP 395
Query: 200 WNTIVS---------GYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEE 246
+ V+ G +DV KL + K I + N ++ YA + +E+
Sbjct: 396 DDVTVASALAACASLGRLDV-----GIKLHELATSKGFIRYIVVANALVEMYAKSKIIEK 450
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+F+ MP+++V SW+ +I G+ N FE L F+ ML + V PN T + L+ACA
Sbjct: 451 AIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD--VKPNSVTFIAALAACA 508
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
G+L K +H + G V NAL+D+Y KCG A F + TKD+++WN
Sbjct: 509 ATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNI 568
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+++G HG G ALS F+EM GE PD +TF+ +LC C+ G+V +G F SM Y
Sbjct: 569 MLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKY 628
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
SIVP ++HY CMVDLL+R GRL E +F+ RMPI DA +W LL CR+++N+EL ELA
Sbjct: 629 SIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELA 688
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ + ELEP + V+LS++Y D G W +V++++ MR G + GCS +EV +
Sbjct: 689 AKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAI 746
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 192/371 (51%), Gaps = 14/371 (3%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+++ + + +A K+F K+ +++V SWN M GY + F + L+ +M A P+
Sbjct: 135 MLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPD 194
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+TFP VL+SC + L G E+H VL+ G + V AL+ +Y+ +EAA KVF
Sbjct: 195 VYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFD 254
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRNM 213
M + + W +MI G+ + + LF E+ P I T+ SG + ++
Sbjct: 255 GMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS--DL 312
Query: 214 IEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
A+++ K+ DV N+++ Y++ G + E +F M R+ SW +I GY
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
NG + L+ + M V P+D T+ + L+ACA LG LD +H A G+
Sbjct: 373 EKNGFPDKALEVYALMEVN-NVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ V NAL++MYAK IIE A++VF M KD+I+W+++I+G + + AL F M
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML- 490
Query: 390 AGEMPDGITFI 400
A P+ +TFI
Sbjct: 491 ADVKPNSVTFI 501
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 124/269 (46%), Gaps = 12/269 (4%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N MLS G+ ++F +MPER+VFSWN ++GGY G E LD + RML G
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG-A 191
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P+ T VL +C + L + VH + G V V NAL+ MYAKCG +E A
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ M D I+WN +I+G + L LF M P+ +T + A GL
Sbjct: 252 VFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVAS---GL 308
Query: 412 VEEGLSY---FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
+ + L + ++A+ + ++ + + GR+ EA RM DA+ W
Sbjct: 309 LSD-LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETR-DAMSWT 366
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKN 497
++ Y+ + ALE +E N
Sbjct: 367 AMISG---YEKNGFPDKALEVYALMEVNN 392
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+GNA++ M + G +A VF M +D+ +WN ++ G G AL L+H M AG
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PD TF +L +C + + G + + + + +++ +V + A+ G + A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGRE-VHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA 249
Query: 452 VDFVKRMPIEADAVIW-ANLLGSCRVYKNVELAELALERLT-ELEPK--NPANFVMLSNI 507
M + D + W A + G ++ EL L L E+EP + + S +
Sbjct: 250 RKVFDGMSL-TDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308
Query: 508 YGDLGRWKDVARIKV 522
DL K++ + V
Sbjct: 309 LSDLDFAKEIHALAV 323
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 275/515 (53%), Gaps = 73/515 (14%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVGTALIELYST-GKAIEA------ 153
T +L+ C ALREG+ +H + G R F+ LI +Y+ GK +EA
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDK 120
Query: 154 ------------------------AYKVFGEMDERNVVVWTSMINGYISCG--------- 180
A K+F +M E++VV W +M+ + CG
Sbjct: 121 MSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFY 180
Query: 181 ---DIVSARC--------------LFELAPER-------------DVILWNTIVSGYIDV 210
+ +C L E+ R +V+L ++++ Y+
Sbjct: 181 SEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKC 240
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
M +ARKLFD+M +DV++W TM+SGYA GD++ LF EMPE+N SW LI GYA
Sbjct: 241 GLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYA 300
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
NG+ + L+ F +M+ V P+ T + L ACA + +L K +H Y +Q N
Sbjct: 301 RNGMGHKALELFTKMML-FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNT 359
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V +ALIDMY+KCG + VF+ M K D++ WNTIIS LA HG G A+ + +M
Sbjct: 360 IVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVR 419
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
+G PD ITF+ IL AC+H GLV++GL++F+SM+ DY IVP EHY C++DLL RAG
Sbjct: 420 SGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFE 479
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
E +D +++MP + D +W LLG CR++ ++EL A ERL ELEP++ +V+LS+IY
Sbjct: 480 EVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYA 539
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LGRW+ V +++ M + KK S +E+ V
Sbjct: 540 VLGRWESVQKVRQLMNERQVKKERAISWLEIENKV 574
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 274/512 (53%), Gaps = 24/512 (4%)
Query: 50 MTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
M A+++FD++ +N SWN M G+ R + +F M D+ + ++
Sbjct: 148 MEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSA----SLSAMVSG 203
Query: 110 CVKINALREGEEL--HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD----- 162
++ L E ++L L + + +A + LI Y + A ++F +
Sbjct: 204 FIRNGRLHEADDLLTKRLTVMDMDKA-VGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQ 262
Query: 163 ---------ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
ERNVV W SM+ YI GD+ SAR LF+ P +D++ WNT+++GY M
Sbjct: 263 HKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEM 322
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
EA KLF ++P D ++WN M+ G+ GDVE + F+ MPER+ +WN +I GY N
Sbjct: 323 EEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNE 382
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
+ + F+RML G P+ T+ +VL+ACA L L +H E + +
Sbjct: 383 DYDSTIKLFQRMLEVGER-PDHHTLSSVLAACASLAMLRLGAQLHQLIE-KSFLPDTATN 440
Query: 334 NALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NAL+ MY++CG + +A +F M T +D+++WN +I G G AL LF EM++A
Sbjct: 441 NALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKV 500
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
MP ITFI +L AC + GLV EG F +M DY + +EHY +V+L+ R G+L +A+
Sbjct: 501 MPTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDAL 560
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ +K MPI D +W LG+C KN LAE+A L++++P + A +V++ N++ G
Sbjct: 561 ELIKSMPIAPDRAVWGAFLGACTAKKNEPLAEMAANALSKIDPDSSAPYVLMHNLHAHEG 620
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
RW + ++ M G K PG S I++++ V
Sbjct: 621 RWGSASLVREDMERLGIHKHPGYSWIDLHDKV 652
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 169/366 (46%), Gaps = 57/366 (15%)
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+L+ L G+ AA ++F + R+VV W S++ D+ +ARC F+ P RD+I
Sbjct: 42 SLVGLLRRGR-FSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDIIS 100
Query: 200 WNTIVSGY---IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
WNT++S Y + ++ AR+LF +MP++D +SW+T+L Y G +EE +RLF+EMP
Sbjct: 101 WNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPH 160
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRM---------------LTEGRVFPNDATI--- 298
RN SWN +I G+ G + L+ F M + GR+ D +
Sbjct: 161 RNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKR 220
Query: 299 VTVLSACARLGALD------------------FSKWVHVYAEYNG-----YQGNVCVGNA 335
+TV+ +GA + FS ++ G ++ NV N+
Sbjct: 221 LTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNS 280
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
++ Y + G + +A +F+ M KDL++WNT+I+G A LF E+ + PD
Sbjct: 281 MMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPD----PD 336
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV--------PQIEHYGCMVDLLARAGR 447
+T+ ++ T G VE +F M +I Q E Y + L R
Sbjct: 337 AVTWNLMIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLE 396
Query: 448 LAEAVD 453
+ E D
Sbjct: 397 VGERPD 402
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 16/242 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I Q + +AR FD++ +++ ++WN M +GY QNE + + + LF +M ++ P+
Sbjct: 343 MIRGFTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPD 402
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL +C + LR G +LH L+ K+ F + AL+ +YS + +A +FG
Sbjct: 403 HHTLSSVLAACASLAMLRLGAQLHQLIEKS-FLPDTATNNALMTMYSRCGELISAKAIFG 461
Query: 160 EMD-ERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDVRNMI 214
M +R++V W ++I GY G+ A LFE V I + +++S + +
Sbjct: 462 HMHTQRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVS 521
Query: 215 EARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEM---PERNVFSWNGLI 266
E R +F M V + +++ +G +E+ L + M P+R V W +
Sbjct: 522 EGRVVFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAV--WGAFL 579
Query: 267 GG 268
G
Sbjct: 580 GA 581
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 100/254 (39%), Gaps = 25/254 (9%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N L G G +RLF+ +P R+V +WN L+ + F M +
Sbjct: 40 NRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDII 99
Query: 292 FPNDATIVTVLSACAR-LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
N T+LSA AR L D + ++ Y Q + + L+ Y + G++E A
Sbjct: 100 SWN-----TLLSAYARSLQPNDLAAARRLF--YEMPQRDAVSWSTLLGAYTRRGLMEEAQ 152
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
+F+ M ++ +WNT+I+G G+ AL++F M + D + ++ G
Sbjct: 153 RLFDEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDK----DSASLSAMVSGFIRNG 208
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV-------------KR 457
+ E + + + ++ + GR+ +A KR
Sbjct: 209 RLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKR 268
Query: 458 MPIEADAVIWANLL 471
M E + V W +++
Sbjct: 269 MVFERNVVSWNSMM 282
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/569 (34%), Positives = 294/569 (51%), Gaps = 77/569 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI V GL+ + +I+ ++ ++ AR++FD + ++N SWN+M + YA
Sbjct: 255 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 314
Query: 80 FHRTVVVLFTQMKKLDAMP-----NCF------------------------------TFP 104
F LF +++ D P NC +
Sbjct: 315 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 374
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
VL++ ++ L G+E H VL+NGF +++VGT+LI++
Sbjct: 375 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM-------------------- 414
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQM 223
Y+ + SA+ +F+ R++ WN++VSGY + M E A +L +QM
Sbjct: 415 -----------YVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGY-SFKGMFEDALRLLNQM 462
Query: 224 PKK----DVISWNTMLSGYANNGDVEECKRLFEEMPE----RNVFSWNGLIGGYANNGLF 275
K+ D+++WN M+SGYA G +E + + NV SW LI G + G
Sbjct: 463 EKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNN 522
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+ L F +M EG V PN A+I +L ACA L L K +H + NG+ +V V A
Sbjct: 523 RDSLKFFAQMQQEG-VMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATA 581
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
LIDMY+K ++NA VF + K L +WN +I G A+ G G A+S+F+EM+ G PD
Sbjct: 582 LIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPD 641
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
ITF +L AC + GL+ EG YF SM DY IVP++EHY CMVDLL RAG L EA D +
Sbjct: 642 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 701
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
MP++ DA IW LLGSCR++KN++ AE A + L +LEP N AN++++ N+Y RW+
Sbjct: 702 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 761
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
D+ ++ M G + S I++N+ V
Sbjct: 762 DMDHLRELMGAAGVRNRQVWSWIQINQRV 790
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 209/444 (47%), Gaps = 46/444 (10%)
Query: 63 QNVVSWNAMFNGYAQNEFHRTVVV-LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
+N + WN+ + + +V+ +F ++ + + + + LK+C ++ + G E
Sbjct: 95 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 154
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW------------ 169
+H ++K GF ++++ AL+ Y +E A +VF EM ++W
Sbjct: 155 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 214
Query: 170 --------------------TSMINGYISCGDIVSARC-------LFELAPERDVILWNT 202
+++ +CG + + +F + DV L N
Sbjct: 215 LQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNP 274
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP----ERN 258
++S Y + AR++FD M ++ SWN+M+S YA G + + LF E+ + +
Sbjct: 275 LISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPD 334
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
+ +WN L+ G+ +G EVL+ +RM EG PN +++ +VL A + LG L+ K H
Sbjct: 335 IVTWNCLLSGHFLHGYKEEVLNILQRMQGEG-FKPNSSSMTSVLQAISELGFLNMGKETH 393
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
Y NG+ +V VG +LIDMY K + +A VF++M +++ WN+++SG + G
Sbjct: 394 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFE 453
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
AL L ++M+ G PD +T+ G++ G +E L+ + P + + +
Sbjct: 454 DALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQ-TKSLGLTPNVVSWTAL 512
Query: 439 VDLLARAGRLAEAVDFVKRMPIEA 462
+ ++AG +++ F +M E
Sbjct: 513 ISGSSQAGNNRDSLKFFAQMQQEG 536
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 203/488 (41%), Gaps = 88/488 (18%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++ G + Y+ ++ + + A ++F ++ + + WN Q+E
Sbjct: 154 EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSE 213
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V LF +M+ T VL++C K+ AL +++H V + G +++ +
Sbjct: 214 KLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCN 273
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
LI +YS +E A +VF M+ RN W SMI+ Y + G + A LF ++ P
Sbjct: 274 PLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333
Query: 194 ERDVILWNTIVSGYI------DVRNMIEARK---------------------LFDQMPKK 226
D++ WN ++SG+ +V N+++ + F M K+
Sbjct: 334 --DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKE 391
Query: 227 ------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
DV +++ Y N + + +F+ M RN+F+WN L+ GY+ G+
Sbjct: 392 THGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGM 451
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
F + L +M EG + P D W N
Sbjct: 452 FEDALRLLNQMEKEG-IKP------------------DLVTW-----------------N 475
Query: 335 ALIDMYAKCGIIENAVDVFNSMD----TKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+I YA G + A+ V + T ++++W +ISG + G +L F +M+
Sbjct: 476 GMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQE 535
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G MP+ + +L AC + L+++G +++ + + ++D+ +++ L
Sbjct: 536 GVMPNSASITCLLRACASLSLLQKG-KEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKN 594
Query: 451 AVDFVKRM 458
A +R+
Sbjct: 595 AHKVFRRI 602
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 170/403 (42%), Gaps = 48/403 (11%)
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE-ARKLFDQMPKKDVI 229
++I+ Y+ GD SA +F + R+ + WN+ V + + ++F ++ K V+
Sbjct: 71 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130
Query: 230 S------------------WNTM---------------------LSGYANNGDVEECKRL 250
W M ++ Y +E+ ++
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F EMP WN I + + ++ F++M + ATIV VL AC ++GA
Sbjct: 191 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQACGKMGA 249
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ +K +H Y G +V + N LI MY+K G +E A VF+SM+ ++ +WN++IS
Sbjct: 250 LNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISS 309
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A G A SLF+E++++ PD +T+ +L G EE L+ Q M + P
Sbjct: 310 YAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKP 368
Query: 431 QIEHYGCMVDLLARAGRL---AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
++ ++ G L E +V R + D + +L+ KN L A
Sbjct: 369 NSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID--MYVKNHSLTS-AQ 425
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
++ +N + L + Y G ++D R+ M G K
Sbjct: 426 AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 468
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 222 QMPKKDVISWN------TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN-GL 274
++P+K WN ++S Y GD +F RN WN + + ++ G
Sbjct: 58 KLPQK----WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGS 113
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTV-LSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
VL+ FK + +G VF D+ + +V L C R+ + +H G+ +V +
Sbjct: 114 LHIVLEVFKELHGKGVVF--DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLR 171
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
AL++ Y +C +E A VF+ M + + WN I + + LF +M+ +
Sbjct: 172 CALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLK 231
Query: 394 PDGITFIGILCACTHMG 410
+ T + +L AC MG
Sbjct: 232 AETATIVRVLQACGKMG 248
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/569 (31%), Positives = 305/569 (53%), Gaps = 41/569 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAM 71
++ H+ Q+ ++ + + ++ + ++YA +F I+ + +N++
Sbjct: 26 KSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIVFNSL 85
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+++ R ++ + +++ + + +FP +LK+ K++AL EG ELH K
Sbjct: 86 LRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIAT 145
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG----------- 180
++ FV T L+++Y+ I A VF EM +R+VV W +MI Y G
Sbjct: 146 LSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEE 205
Query: 181 --------------DIVSA----------RCLFELAPERDVI----LWNTIVSGYIDVRN 212
+IVSA R +++ E DV L +V+ Y
Sbjct: 206 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGC 265
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
M A + F +M +++ M+SGY+ G +++ + +F++ +++ W +I YA +
Sbjct: 266 MDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAES 325
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
E L F+ M G + P+ T+++V+SAC LG LD +KWVH Y NG + + +
Sbjct: 326 DHPQEALRVFEEMCCSG-IKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPI 384
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NALI+MYAKCG ++ A DVF M T+++++W+++I+ AMHG + +LSLF +MK
Sbjct: 385 DNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENV 444
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
P+ +TF+G+L C+H GLVEEG F SM +Y+I P+IEHYGCMVDL RA L EA+
Sbjct: 445 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREAL 504
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ ++ MP+ + VIW +L+ +CRV+ +EL ELA +R+ +LEP + V++SNIY
Sbjct: 505 EVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREY 564
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW V I+ M K G S I++N
Sbjct: 565 RWDYVRIIRWIMEKKKVFKEKGLSRIDLN 593
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 293/521 (56%), Gaps = 13/521 (2%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ + +T ARK+FD + ++V +WN+M + Y+ +E +F +M+
Sbjct: 46 FVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHE 105
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ TF +L +CV L+ G+ + + + F ++FVGTALI +Y+ ++ E A
Sbjct: 106 GERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENA 165
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDV 210
+VFG M ++N++ W+++I + G A F + + + + + ++++G+
Sbjct: 166 AQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTP 225
Query: 211 RNMIEARKLFDQMPKKDVISWNTM------LSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+ E ++ + + + TM + G G+++ + + +EM E+ + +WN
Sbjct: 226 SGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNV 285
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPND-ATIVTVLSACARLGALDFSKWVHVYAEY 323
LI GY +G E L+ ++R+ E P D T ++VL+AC +L K +H A
Sbjct: 286 LINGYTLHGRSREALETYQRLQLEA--IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G +V V NAL +MY+KCG +ENA +F+SM + ++WN ++ A HG L L
Sbjct: 344 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 403
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
+M+ G +GITF+ +L +C+H GL+ EG YF S+ D I + EHYGC+VDLL
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLG 463
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+L EA ++ +MP E + V WA+LLG+CRV+K+++ +LA +L EL+P N + V+
Sbjct: 464 RAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVV 523
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LSNIY + G WK+ A+++ AM KK+PG SSI+V V
Sbjct: 524 LSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKV 564
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 185/383 (48%), Gaps = 13/383 (3%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N TF VL S V +ALR+G+ +H V ++ ++FV TAL+ Y+ ++ A KVF
Sbjct: 9 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 68
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAP---ER-DVILWNTIVSGYIDVRNMI 214
M R+V W SMI+ Y A +F+ ER D + + +I+ ++ N+
Sbjct: 69 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQ 128
Query: 215 EARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ + + + + D+ +++ YA E ++F M ++N+ +W+ +I +A
Sbjct: 129 HGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFA 188
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
++G E L F+ M EG + PN T +++L+ L+ +H+ +G
Sbjct: 189 DHGHCGEALRYFRMMQQEG-ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTT 247
Query: 331 CVGNALIDMYAKC--GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ NAL+++Y +C G ++ A + MD + + WN +I+G +HGR AL + ++
Sbjct: 248 TMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQ 307
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
D +TFI +L ACT + EG S A++ + + + ++ ++ G +
Sbjct: 308 LEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSM 366
Query: 449 AEAVDFVKRMPIEADAVIWANLL 471
A MPI + AV W +L
Sbjct: 367 ENARRIFDSMPIRS-AVSWNGML 388
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 168/406 (41%), Gaps = 77/406 (18%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
E +H ++ + + E ++ +IT A+ + A ++F ++ +N+++W+A+
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAII 184
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+A + + F M++ +PN TF +L + L E +H L+ ++G
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244
Query: 133 ANIFVGTALIELY---STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA---- 185
+ AL+ +Y TG+ ++ A + EMDE+ + W +INGY G A
Sbjct: 245 DTTTMSNALVNVYGRCETGE-LDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY 303
Query: 186 -RCLFELAP----------------------------------ERDVILWNTIVSGYIDV 210
R E P + DVI+ N + + Y
Sbjct: 304 QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKC 363
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M AR++FD MP + +SWN ML YA +G+ E
Sbjct: 364 GSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESE------------------------- 398
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVHVYAEYNGYQGN 329
EVL ++M EG V N T V+VLS+C+ G + + ++ H G +
Sbjct: 399 ------EVLKLIRKMEQEG-VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVK 451
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
L+D+ + G ++ A + M ++ +++TW +++ +H
Sbjct: 452 TEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVH 497
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 8/290 (2%)
Query: 285 MLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
ML EG V N T + VL++ AL K++H + + +V V AL++ Y KCG
Sbjct: 1 MLLEG-VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCG 59
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
+ +A VF+ M + + TWN++IS ++ R A +F M++ GE D +TF+ IL
Sbjct: 60 SLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILD 119
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
AC + ++ G +S++ + S + ++ + AR A RM + +
Sbjct: 120 ACVNPENLQHGKHVRESIS-ETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNL 177
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEP--KNPANFVMLSNIYGDLGRWKDVARIKV 522
+ W+ ++ + + + A L R+ + E N F+ L N + ++++RI +
Sbjct: 178 ITWSAIITAFADHGHCGEA-LRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 236
Query: 523 AMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQN 572
+ + G S+ VN V C + ELD ++ E + ++ N
Sbjct: 237 LITEHGLDDTTTMSNALVN--VYGRCETGELDVAEVILQEMDEQQITAWN 284
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 291/534 (54%), Gaps = 9/534 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V+ G E YI I ++ ++ A +FD + +++ +WNAM +G+ N
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNG 219
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F +M+ + T +L CV+++ + G +H +K G ++FV
Sbjct: 220 KVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCN 279
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPER 195
ALI +Y+ + +A +F +M R++V W S++ + V A ++ +
Sbjct: 280 ALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVP 339
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRL 250
D++ ++ S ++ N + +R + + ++ D+ N ++ YA G ++ +++
Sbjct: 340 DLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKV 399
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FE +P ++V SWN LI GY+ NGL E +D + M PN T V++L+A ++LGA
Sbjct: 400 FEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGA 459
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L H N ++ V L+DMY KCG + +A+ +F + + ++WN IIS
Sbjct: 460 LKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISC 519
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+HG G A+ LF EM++ G PD ITF+ +L AC+H GLV+EG FQ M Y I P
Sbjct: 520 HGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRP 579
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++HYGCMVDL RAG L +A +FVK MP+ D +W LLG+CR+++NVEL + L
Sbjct: 580 SLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHL 639
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++E +N +V+LSNIY LG W+ V ++ RD G KK PG SSIEV++ +
Sbjct: 640 LKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKI 693
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 259/507 (51%), Gaps = 25/507 (4%)
Query: 14 TTKHL-HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
T HL Q+ +V SG +S +++ ++I A L + +AR FD+I ++V +WN+M
Sbjct: 54 TKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMI 113
Query: 73 NGYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ YA+ FH V + + +TFP V+++C L +G ++HCLVLK GF
Sbjct: 114 SAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGF 170
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
++++ + I YS + A +F M R++ W +MI+G+ G + A +F+
Sbjct: 171 ECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDE 230
Query: 192 APERDVILWNTIVSGYIDVRNMIE-----------ARKLFDQMPKKDVISWNTMLSGYAN 240
+ V + + +S + + ++ A KL + D+ N +++ YA
Sbjct: 231 MRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEF---DLFVCNALINMYAK 287
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G++ + +F +M R++ SWN L+ + N L + +M + G V P+ T+V+
Sbjct: 288 FGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIG-VVPDLLTLVS 346
Query: 301 VLSACARLGALDFSKWVHVYAEYN-GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+ S A LG S+ +H + + ++ +GNA+IDMYAK G I++A VF + K
Sbjct: 347 LASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK 406
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMK-NAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D+I+WN++I+G + +G A+ ++ M+ +G +P+ T++ IL A + +G +++G+
Sbjct: 407 DVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKA 466
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
+ ++ + I C+VD+ + G+LA+A+ +P ++ +V W N + SC
Sbjct: 467 HGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQS-SVSW-NAIISCHGLH 523
Query: 479 NVELAELALERLTELEPKNPANFVMLS 505
L + L + + E P + +S
Sbjct: 524 GYGLKAVKLFKEMQSEGVKPDHITFVS 550
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
AHS QL K + Q++ + L +++ ++ + ++ A +F ++ Q+ V
Sbjct: 453 AHS-QLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSV 511
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWNA+ + + + + V LF +M+ P+ TF +L +C + EG+ L+
Sbjct: 512 SWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLM 571
Query: 127 LKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMI 173
+ G R ++ +++L+ +E A+ M R +V VW +++
Sbjct: 572 QETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL 620
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 297/569 (52%), Gaps = 59/569 (10%)
Query: 28 SGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVL 87
+G + ++ ++ ++ ++ ARK+FD++ +VVSWN++ YA+ + + +
Sbjct: 156 TGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEM 215
Query: 88 FTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
F++M + P+ T VL C + G++ H + + N+FVG L+++Y+
Sbjct: 216 FSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYA 275
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNT 202
++ A VF M ++VV W +M+ GY G A LFE E DV+ W+
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335
Query: 203 IVSGYIDVRNMIEA----RKLFDQMPKKDVISWNTMLSGYAN------------------ 240
+SGY EA R++ K + ++ ++LSG A+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 241 -----NGDVEE-------------CKR------LFEEMP--ERNVFSWNGLIGGYANNGL 274
NG +E CK+ +F+ + ER+V +W +IGGY+ +G
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 275 FFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC-- 331
+ L+ M E + PN TI L ACA L AL K +H YA N Q N
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN--QQNAVPL 513
Query: 332 -VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V N LIDMYAKCG I +A VF++M K+ +TW ++++G MHG G AL +F EM+
Sbjct: 514 FVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI 573
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G DG+T + +L AC+H G++++G+ YF M D+ + P EHY C+VDLL RAGRL
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A+ ++ MP+E V+W LL CR++ VEL E A +++TEL N ++ +LSN+Y +
Sbjct: 634 ALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYAN 693
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
GRWKDV RI+ MR G KK PGCS +E
Sbjct: 694 AGRWKDVTRIRSLMRHKGIKKRPGCSWVE 722
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 251/520 (48%), Gaps = 62/520 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVS 67
+ +T + I ++++ G+ + +T +I+ L +++A + + +D V
Sbjct: 36 HKCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYH 94
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN++ Y N + F M L P+ +TFP V K+C +I+++R G+ H L
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------- 180
GF +N+FVG AL+ +YS ++ A KVF EM +VV W S+I Y G
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214
Query: 181 --------------DI-----------VSARCL------FELAPE--RDVILWNTIVSGY 207
DI V R L F + E +++ + N +V Y
Sbjct: 215 MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER----NVFSWN 263
M EA +F MP KDV+SWN M++GY+ G E+ RLFE+M E +V +W+
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA-- 321
I GYA GL +E L ++ML+ G + PN+ T+++VLS CA +GAL K +H YA
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 322 -----EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK--DLITWNTIISGLAMH 374
NG+ V N LIDMYAKC ++ A +F+S+ K D++TW +I G + H
Sbjct: 394 YPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 375 GRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQ 431
G AL L EM ++ P+ T L AC + + G + ++ + VP
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPL 513
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
C++D+ A+ G + +A M +E + V W +L+
Sbjct: 514 FVS-NCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLM 551
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 146/325 (44%), Gaps = 24/325 (7%)
Query: 234 MLSGYANNGDVEECKRLFEEMPERN--VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
++S Y + G + L P + V+ WN LI Y NNG + L +F M +
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P++ T V AC + ++ H + G+ NV VGNAL+ MY++CG + +A
Sbjct: 125 -PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARK 183
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA-GEMPDGITFIGILCACTHMG 410
VF+ M D+++WN+II A G+ AL +F +M N G PD IT + +L C +G
Sbjct: 184 VFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVG 243
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
G F A+ ++ + C+VD+ A+ G + EA MP++ D V W +
Sbjct: 244 TRSLG-KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWNAM 301
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+ E A E++ E I D+ W A A R G++
Sbjct: 302 VAGYSQIGRFEDAVRLFEQMQE------------EKIKMDVVTW-SAAISGYAQRGLGYE 348
Query: 531 KLPGC-----SSIEVNEVVMLGCLS 550
L C S I+ NEV ++ LS
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLS 373
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 293/529 (55%), Gaps = 13/529 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ ++ G E ++ ++ ++ + +R++FD+ + ++V+SWN+M Y+++
Sbjct: 75 LHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFR 134
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN--ALREGEELHCLVLKNGFRANIFVG 138
+ LF +M PN TF +L +L +G LH + K + V
Sbjct: 135 VNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVE 194
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+L+++Y I++A VF + E+ V+ WT M+ GY+ G + F + +V+
Sbjct: 195 NSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVV 254
Query: 199 L----WNTIVSGYIDVRNMIEARKLFDQMPK-----KDVISWNTMLSGYANNGDVEECKR 249
L + I+S I + N+ L + K +D I ++S Y+ GD+ +
Sbjct: 255 LDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGC-LLISMYSKCGDLLSARA 313
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ + E++++SW +I GYAN G E L F M T+ V PN A + T +SACA LG
Sbjct: 314 VFDLLSEKSIYSWTSMISGYANAGYPREALSLFS-MATQNNVRPNGAMLATAISACADLG 372
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+L + + + + +G + V +LI +Y K G IE A VFNSM +DL W+++++
Sbjct: 373 SLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMN 432
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A+HG G ++LFHEM+ +G PDG + IL AC+H GLVE+GL +F++M +DY IV
Sbjct: 433 GYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIV 492
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P + HY C+VD+L+RAG L A++ ++ MP + + WA L +CR Y +VEL E+A
Sbjct: 493 PTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRC 552
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
L P+NP N V+++N+Y +G+WK+ A+++ + D G K PGCS +
Sbjct: 553 LLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 601
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 196/435 (45%), Gaps = 27/435 (6%)
Query: 60 ITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
IT + + WN F + ++ M+ N FTFP++LK+C + ++ +G
Sbjct: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
LH ++ GF +++FV T+L+++YS + A+ +VF E R+V+ W SMI Y
Sbjct: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
Query: 180 GDIVSARCLFE------LAPERDVILWNTIVSGYIDVRN--MIEARKLFDQMPK----KD 227
+ A LF P + +++SG+ D + + + R L + K D
Sbjct: 133 FRVNEALKLFREMLGGGFEPNSSTFV--SLLSGFADPTHGSLFQGRLLHGCLTKFQLHDD 190
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
N+++ Y N G ++ +F + E+ V SW ++GGY G +V + F +M
Sbjct: 191 TPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQM-R 249
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
+ V + V ++S+C +LG L +H G + +G LI MY+KCG +
Sbjct: 250 QNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLL 309
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
+A VF+ + K + +W ++ISG A G ALSLF P+G + AC
Sbjct: 310 SARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACA 369
Query: 408 HMGLVE-----EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+G + E +A D + + H C + +A ++ ++ I
Sbjct: 370 DLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM-------IHR 422
Query: 463 DAVIWANLLGSCRVY 477
D W++++ V+
Sbjct: 423 DLAAWSSMMNGYAVH 437
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 274/529 (51%), Gaps = 65/529 (12%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T HL QI + GL S+ I ++ C L Q+ YA +F+ N++ +N++
Sbjct: 20 KTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFNSII 79
Query: 73 NGYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
++ FH++ + +P+ FTFP +LK+ + G+ LH V GF
Sbjct: 80 KAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGF 139
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
R+ V ++ Y +CG
Sbjct: 140 Y-------------------------------RHSPVEIGLLEVYSNCG----------- 157
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
M +A K+FD+M ++V+ WN M++G+ GD+E +LF
Sbjct: 158 --------------------KMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLF 197
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ M +R+V SWN +I A E F+ ML +G P+DAT+VTVL CARLG +
Sbjct: 198 KRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQG-FEPDDATLVTVLPVCARLGDV 256
Query: 312 DFSKWVHVYAEYNGYQGNV-CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
D +W+H YA+ G V VGN+L+D Y KCG +E A VFN M K++++WN +ISG
Sbjct: 257 DAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISG 316
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
L ++G+G + LF +M G P TF+G+L C H G V++G F SM + + + P
Sbjct: 317 LGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSP 376
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHYGC+VDLL R G + EA D ++ MP+ +A +W LL +CR + + E+AE+A + L
Sbjct: 377 KLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKEL 436
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
LEP N N+V+LSN+Y + +W +V +++V M+ G KK PG S+++
Sbjct: 437 VRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 295/540 (54%), Gaps = 39/540 (7%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFD-KITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
K+ ++ + +CA + + D KITD N+ + + R + L Q
Sbjct: 39 KTPLVSSNLYHSCATIGTSVLPSETIDCKITDYNI-----EICRFCELGNLRRAMELINQ 93
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
K D T+ VL+ C + ++++G +H ++ N + +G+ L+ +Y T
Sbjct: 94 SPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGD 151
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGD------------------IVSARCLFELA 192
+ ++F ++ V +W ++NGY G+ + SAR LF+
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDEL 211
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISW--------NTMLSGYAN 240
+RDVI WN+++SGY+ + LF+QM D+ + N +L Y+
Sbjct: 212 GDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSK 271
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
+G++ ++FE M ER+V SW +I GYA GL + F M E +FPN T+
Sbjct: 272 SGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKED-LFPNSITMAC 330
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+L ACA L AL+ + +H + NG+ + V NAL+DMY KCG + A +F+ + KD
Sbjct: 331 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 390
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
L++W +I+G MHG G+ A++ F+EM+N+G PD ++FI IL AC+H GL++EG +F
Sbjct: 391 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFN 450
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M + I P+ EHY C+VDLLARAG L++A F+K MPIE DA IW LL CR+Y +V
Sbjct: 451 MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDV 510
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+LAE E + ELEP+N +V+L+NIY + +W++V +++ + G +K PGCS IE+
Sbjct: 511 KLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEI 570
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+I ++ +G ++ ++ + + AR +FD I ++++VSW M GY +
Sbjct: 345 QEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMH 404
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + F +M+ P+ +F +L +C L EG N R N +
Sbjct: 405 GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-----NMMRNNCCIE 459
Query: 139 ------TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARC 187
+++L + + AYK M E + +W +++ G D+ A
Sbjct: 460 PKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEH 519
Query: 188 LFELAPERD---VILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
+FEL PE V+L N Y + E +KL +++ ++
Sbjct: 520 VFELEPENTGYYVLLANI----YAEAEKWEEVKKLRERIGRR 557
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 287/525 (54%), Gaps = 10/525 (1%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G + + ++ +I ++ AR +FD + +++ SWNAM +G QN + +
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+M+ N T +L C ++ + +H V+K+G ++FV ALI +Y+
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTIV 204
+E A K F +M +VV W S+I Y D V+A F + D++ ++
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 205 SGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
S R+ +R + + ++ DV+ N ++ YA G ++ ++FE +P ++V
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDV 484
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SWN LI GYA NGL E ++ +K M + PN T V++L A A +GAL +H
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 544
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+V V LID+Y KCG + +A+ +F + + +TWN IIS +HG
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
L LF EM + G PD +TF+ +L AC+H G VEEG F+ M +Y I P ++HYGCMV
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMV 663
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAG L A DF+K MP++ DA IW LLG+CR++ N+EL + A +RL E++ KN
Sbjct: 664 DLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVG 723
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+LSNIY ++G+W+ V +++ R+ G KK PG S+IEVN V
Sbjct: 724 YYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 283/575 (49%), Gaps = 33/575 (5%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S + K LH + +V +G +S +I+ R++ A L ++ +R FD+I ++V +W
Sbjct: 129 STKTPFAKCLHAL---LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAW 185
Query: 69 NAMFNGYAQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N+M + Y N FH + + + + P+ +TFP VLK+C L +G ++HC
Sbjct: 186 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAF 242
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-R 186
K GF+ N+FV +LI +YS A +F +M R++ W +MI+G I G+ A
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302
Query: 187 CLFELAPERDVILWNTIVS--------GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
L E+ E + + T+VS G I +I + + + D+ N +++ Y
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL-EFDLFVSNALINMY 361
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G++E+ ++ F++M +V SWN +I Y N F +M G P+ T+
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNG-FQPDLLTL 420
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
V++ S A+ S+ VH + G+ +V +GNA++DMYAK G++++A VF +
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIP 480
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACTHMGLVEEGL 416
KD+I+WNT+I+G A +G + A+ ++ M+ E +P+ T++ IL A H+G +++G+
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 540
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+ ++ + C++D+ + GRL +A+ ++P E+ +V W ++ +
Sbjct: 541 K-IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES-SVTWNAIISCHGI 598
Query: 477 YKNVELA-ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
+ + E +L E L E + FV L + G ++ M++ G K
Sbjct: 599 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP---- 654
Query: 536 SSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLP 570
+ GC+ L R + + IK +P
Sbjct: 655 ------SLKHYGCMVDLLGRAGYLEMAYDFIKDMP 683
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 15/249 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I +V+ + L ++ +I + ++ A +F ++ ++ V+WNA+ + + +
Sbjct: 541 KIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHG 600
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M P+ TF +L +C + EG+ L+ + G + ++
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 660
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELAP 193
+++L +E AY +M + + +W ++ I+G I G S R LFE+
Sbjct: 661 CMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR-LFEVDS 719
Query: 194 ER--DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG------YANNGDVE 245
+ +L + I + + + R L + K W+T+ Y N
Sbjct: 720 KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHP 779
Query: 246 ECKRLFEEM 254
+CK ++EE+
Sbjct: 780 KCKEIYEEL 788
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 225/349 (64%), Gaps = 1/349 (0%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D + +++V Y ++ +AR +FD+M +DV++WN M++GY GD + LF+ MP
Sbjct: 112 DAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMP 171
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERNV SW +IGGYA + ++ F+RM EG + + +++VL+AC LGA+D +
Sbjct: 172 ERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEG-IEADGVALLSVLAACGDLGAVDLGE 230
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
WVH + G + + N++IDMY KCG IE AV+VF M+ K ++TW T+I+G A+HG
Sbjct: 231 WVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG 290
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G A+ +F M+ P+ +TF+ IL AC+H+GL + G YF M Y I P++EHY
Sbjct: 291 LGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHY 350
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
GCMVDLL RAG L EA D VK MP++A+A IW LL + R + + L E AL L ELEP
Sbjct: 351 GCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEP 410
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N N+++LSNI+ + RW DV++++ AMR+ G + +PG SSIEV+ +V
Sbjct: 411 NNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMV 459
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 47/305 (15%)
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
++ V ++L++LY T + A VF EM R+VV W MI GY+ GD AR LF+
Sbjct: 111 SDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAM 170
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----------------------DVIS 230
PER+V+ W T++ GY ++ +A ++F +M + D+
Sbjct: 171 PERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGE 230
Query: 231 W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
W N+++ Y G +E+ +FE M E++V +W LI G+A +G
Sbjct: 231 WVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG 290
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW-VHVYAEYNGYQGNVCV 332
L + ++ F RM E + PN T + +LSAC+ +G D +W ++ + V
Sbjct: 291 LGLQAVEMFCRMEREN-MAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEH 349
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG-RGAGALSLFH----E 386
++D+ + G ++ A D+ +M K + W +++ HG G G +L H E
Sbjct: 350 YGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELE 409
Query: 387 MKNAG 391
N+G
Sbjct: 410 PNNSG 414
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I + +AR++FD + ++NVVSW + GYAQ + V +F +M+ +
Sbjct: 150 MIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEAD 209
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
VL +C + A+ GE +H V++ G I + ++I++Y IE A +VF
Sbjct: 210 GVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFE 269
Query: 160 EMDERNVVVWTSMINGYISCG---DIVSARCLFE---LAPERDVILWNTIVSGYIDVRNM 213
M+E++VV WT++I G+ G V C E +AP + + + I+S V
Sbjct: 270 GMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAP--NAVTFLAILSACSHVGLT 327
Query: 214 IEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIG 267
R F+ M K V + M+ G ++E + L + MP + N W L+
Sbjct: 328 DLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLA 387
Query: 268 GYANNG 273
+G
Sbjct: 388 AARTHG 393
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
VV GL + + II + + A ++F+ + +++VV+W + G+A +
Sbjct: 236 VVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQA 295
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE-ELHCLVLKNGFRANIFVGTALIE 143
V +F +M++ + PN TF +L +C + G + +V + + + +++
Sbjct: 296 VEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVD 355
Query: 144 LYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
L ++ A + M + N +W +++ + GD
Sbjct: 356 LLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGD 394
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 261/463 (56%), Gaps = 44/463 (9%)
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++H L+NG F+ L++L + A +F ++ + +V ++ I + S
Sbjct: 5 KQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60
Query: 180 G----------DIVSARC----------------LFELAPER-------------DVILW 200
G + S C LF + P + D+
Sbjct: 61 GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAM 120
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
++ Y + + AR+LFD+MP +D+ +WN++++GYA +G +E LF +MP RNV
Sbjct: 121 TALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVI 180
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SW LI GYA NG + + L+ F + E PN+ +I +VL AC++LGALD K + Y
Sbjct: 181 SWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAY 240
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAG 379
A NG+ N V NA+++++A+CG IE A VF+ + +K +L +WNT+I GLA+HGR
Sbjct: 241 ARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCID 300
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL L+ +M PD +TF+G+L ACTH G+V EG F+SM + + P++EHYGC+V
Sbjct: 301 ALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLV 360
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAG L EA + ++ MP+ D+VIW LLG+C + NVEL E+A E L +LEP NP
Sbjct: 361 DLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPG 420
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
N+V+LSNIY G W VAR++ M+ K G S IEV +
Sbjct: 421 NYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGD 463
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 52/404 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
L QI + +GL+ + ++ +++ QL + YA +FD+I +V +N ++
Sbjct: 3 QLKQIHAYSLRNGLDHTKFLIEKLL----QLPDLPYACTLFDQIPKPSVYLYNKFIQTFS 58
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+L+ QM PN ++F + +C + + G+ LH K+GF +++F
Sbjct: 59 SIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMF 118
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
TAL+++Y+ + +A ++F EM R++ W S+I GY G + +A LF P R+
Sbjct: 119 AMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRN 178
Query: 197 VILWNTIVSGY-----------------------------------------IDVRNMIE 215
VI W ++SGY +D+ IE
Sbjct: 179 VISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIE 238
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM-PERNVFSWNGLIGGYANNGL 274
A + K +S N +L +A G++EE +++F+E+ +RN+ SWN +I G A +G
Sbjct: 239 AYARNNGFFKNAYVS-NAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGR 297
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ L + +ML ++ P+D T V +L AC G + + + E + +Q + +
Sbjct: 298 CIDALQLYDQMLIR-KMRPDDVTFVGLLLACTHGGMVAEGRQLFESME-SKFQVAPKLEH 355
Query: 335 --ALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
L+D+ + G ++ A ++ +M D + W T++ + HG
Sbjct: 356 YGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHG 399
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 292/542 (53%), Gaps = 47/542 (8%)
Query: 42 TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM----KKLDAM 97
+A A + +A +FD+I + +N + G A R V L+T+M
Sbjct: 20 SAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVR 79
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ TFP VL++C + A G ++H V+K G ++ FV ALI +++
Sbjct: 80 PDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHA----------- 128
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
SCG++ A LF+ D + W+ +++G ++ AR
Sbjct: 129 --------------------SCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAAR 168
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
LFD+ P KD++SWN M++ YA GD+ + LF+++PER+V SWN +I GY G
Sbjct: 169 DLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH 228
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE----YNGYQGNVCVG 333
L+ F++M G P+ T++++LSACA G LD + +H NG+ V +G
Sbjct: 229 ALELFEQMQRMGEK-PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFP--VVLG 285
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
NALIDMYAKCG +++A +VF SM KD+ TWN+I+ GLA+HG ++ +F +M
Sbjct: 286 NALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVR 345
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+ +L AC+H G+V++G +F M Y + P I+HYGCMVD+L RAG L EA +
Sbjct: 346 PDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFE 405
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
F+ M E ++VIW LL +CRV+ +ELA+ A +L + ++V+LSNIY +G
Sbjct: 406 FIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGE 465
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNN 573
W +++ M D+G K S ++ ++ G L ++++ I + + IK N
Sbjct: 466 WFGSEKMRKLMDDSGVNK--EADSERLHHRLLFGFLVKQIN---ISPSCISYIKEYNVNP 520
Query: 574 HP 575
HP
Sbjct: 521 HP 522
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 60/372 (16%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV +G E ++ +I A + A +FD ++ V+W+AM G A+
Sbjct: 103 QVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRG 162
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF D P +K V N
Sbjct: 163 DIGAARDLF------DECP--------VKDLVSWN------------------------- 183
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPER 195
+I Y+ + A ++F ++ ER+VV W MI+GY+ CG + A LFE + +
Sbjct: 184 VMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKP 243
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK------DVISWNTMLSGYANNGDVEECKR 249
D++ +++S D ++ ++L + V+ N ++ YA G ++
Sbjct: 244 DIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHE 303
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +++V +WN ++GG A +G E +D F++ML +G+V P++ T V VL AC+ G
Sbjct: 304 VFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKML-KGKVRPDEITFVAVLIACSHGG 362
Query: 310 ALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLIT 363
+D F+ H Y + N+ ++DM + G+++ A + ++M + + +
Sbjct: 363 MVDKGREFFNLMQHKYR----VEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 364 WNTIISGLAMHG 375
W T++S +HG
Sbjct: 419 WRTLLSACRVHG 430
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 42/285 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ M AR++FD++ +++VVSWN M +GY + H + LF QM+++ P+
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPD 244
Query: 100 CFTFPIVLKSCVKINALREGEELHC----LVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
T +L +C L G+ LH + +NGF + +G ALI++Y+ ++++A+
Sbjct: 245 IVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSMKSAH 302
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
+VF M +++V W S++ G G ++ + +FE
Sbjct: 303 EVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFE------------------------- 337
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYA 270
K+ + D I++ +L ++ G V++ + F M E N+ + ++
Sbjct: 338 --KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLG 395
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
GL E + M E PN T+LSAC G ++ +K
Sbjct: 396 RAGLLKEAFEFIDTMKCE----PNSVIWRTLLSACRVHGEIELAK 436
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 262/451 (58%), Gaps = 9/451 (1%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P ++ V + +N L+ G ++H +L G + VG+ ++ Y++ I+++ V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARC----LFELAPERDVILWNTIVSGYIDVRNM 213
F + + + ++ + + +C + + + D+ + +++ Y +
Sbjct: 128 FNGIGD--YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEI 185
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+A K+FD M +DV SWN +L+GY +G ++ +FE MP RN+ SW +I GY+ +G
Sbjct: 186 NDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSG 245
Query: 274 LFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
L + L F M+ E V PN TI++VL ACA+L L+ + +H A G N V
Sbjct: 246 LAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASV 305
Query: 333 GNALIDMYAKCGIIENAVDVFNSMD--TKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
AL MYAKCG + +A + F+ ++ K+LI WNT+I+ A +G G A+S F EM A
Sbjct: 306 LIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQA 365
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD ITF G+L C+H GLV+ GL YF M+ YSI P++EHY C+ DLL RAGRLAE
Sbjct: 366 GIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAE 425
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A V MP+ A IW +LL +CR ++N+E+AE A +L LEP+N N+V+LSN+Y +
Sbjct: 426 ASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAE 485
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
GRW++V +++ ++ G KK PGCS IE+N
Sbjct: 486 AGRWQEVDKLRAIVKSQGTKKSPGCSWIEIN 516
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 48/273 (17%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA------------------ 70
GL+ Y+ +I + ++ A K+FD +T ++V SWNA
Sbjct: 164 GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIF 223
Query: 71 -------------MFNGYAQNEFHRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINA 115
M +GY+Q+ + + LF +M K D+ PN T VL +C +++
Sbjct: 224 ERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST 283
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM--DERNVVVWTSMI 173
L G ++H L + G +N V AL +Y+ ++ A F ++ +E+N++ W +MI
Sbjct: 284 LERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMI 343
Query: 174 NGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
Y S G + A R + + + D I + ++SG + K F+ M
Sbjct: 344 TAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM--STTY 401
Query: 230 SWNTMLSGYA-------NNGDVEECKRLFEEMP 255
S N + YA G + E +L EMP
Sbjct: 402 SINPRVEHYACVADLLGRAGRLAEASKLVGEMP 434
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 197/559 (35%), Positives = 278/559 (49%), Gaps = 75/559 (13%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR +F+K+ + VS+ M G AQN + +F M+ +PN T V+ +
Sbjct: 137 ARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSH 196
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV---- 168
+ + LH L K G A V T L+ +Y ++ A +F E+ ERNVV
Sbjct: 197 VGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVM 256
Query: 169 ---------------------------WTSMINGYISCG--------------------- 180
W ++I+GY+
Sbjct: 257 LNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNE 316
Query: 181 ----DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL---------------FD 221
D++SA C +A IV D + I+A + F+
Sbjct: 317 VMIVDLISA-CGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFE 375
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
K V SWN ++SG+ NG +E+ ++LF+EMPER+VFSW+ +I GY+ N L
Sbjct: 376 LGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQL 435
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F M+ G V PN+ T+V+V SA A LG L +W H Y N N + ALIDMYA
Sbjct: 436 FHEMVAGG-VQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYA 494
Query: 342 KCGIIENAVDVFNSMDTK--DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
KCG I A+ +F + + + WN II GLAMHG +L LF +++ P+ ITF
Sbjct: 495 KCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITF 554
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
IG+L AC H GLV+ G YF+ M Y+I P I+HYGCM+DLL RAGRL EA + +++MP
Sbjct: 555 IGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMP 614
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
++AD VIW LL +CR + NVE+ E A E L +L+ + A V+LSNIY D GRW D
Sbjct: 615 MKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFL 674
Query: 520 IKVAMRDTGFKKLPGCSSI 538
++ AM+ KK PGCS +
Sbjct: 675 VRRAMQSQRMKKSPGCSGV 693
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 148/577 (25%), Positives = 246/577 (42%), Gaps = 122/577 (21%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL---------------- 144
T LKSC + AL +G+++H LV K+G +NIFV +LI
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 145 ---------------YSTGKAIEAAYKVFGEMDERNVVVWTSMING-------------- 175
Y +++ A +F +M + V +T+M+ G
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172
Query: 176 ---------------------YISCGDIVSARCL----FELAPERDVILWNTIVSGYIDV 210
Y G I++ R L F+L E I+ +V Y
Sbjct: 173 KDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVC 232
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
++ AR LFD++P+++V++WN ML+GY+ +G V+ + LFE +P ++V SW +I GY
Sbjct: 233 SSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYV 292
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL------------------D 312
E L ++ ML G V PN+ IV ++SAC R A+ D
Sbjct: 293 QIERLGEALRMYRSMLRTG-VGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD 351
Query: 313 F--SKWVHVYA---EYN--------GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
F + +H YA E N G + +V NALI + + G+IE A +F+ M +
Sbjct: 352 FIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPER 411
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ +W+++ISG + + + AL LFHEM G P+ IT + + A +G + EG +
Sbjct: 412 DVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEG-RWA 470
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV-IWANLLGSCRV-- 476
+ SI ++D+ A+ G + A+ + +V W ++ +
Sbjct: 471 HEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHG 530
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTG---FKKLP 533
+ NV L + + ++P + +LS A + DTG FK +
Sbjct: 531 HANVSLKLFSQLQRVRIKPNSITFIGVLS------------ACCHAGLVDTGEKYFKGMK 578
Query: 534 GCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLP 570
+IE N + GC+ L R ++ A MI+ +P
Sbjct: 579 NLYNIEPN-IKHYGCMIDLLGRAGRLKEAAEMIRKMP 614
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ T+V+ L +C+ L AL + +H +G N+ V N+LI Y KC +I NA +F+
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 355 S-------------------------------MDTKDLITWNTIISGLAMHGRGAGALSL 383
+ M K +++ T++ GLA + A+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLV-----EEGLSYFQSMAMDYSIVPQIEHYGCM 438
F +M+ AG +P+ +T ++ A +H+G + LS+ + + + H C+
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
L A L + + E + V W +L Y L +LA + + K+
Sbjct: 232 CSSLGNARVLFDEIP-------ERNVVTWNVMLNG---YSKSGLVDLARDLFERIPAKDV 281
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
++ + + Y + R + R+ +M TG
Sbjct: 282 VSWGTIIDGYVQIERLGEALRMYRSMLRTG 311
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 124/317 (39%), Gaps = 78/317 (24%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN----- 73
Q +V +G + D+I II A ++ A F+ + +V SWNA+ +
Sbjct: 336 QQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRN 395
Query: 74 --------------------------GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
GY+QNE + LF +M PN T V
Sbjct: 396 GMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVF 455
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER--N 165
+ + L EG H +L N N + ALI++Y+ +I A ++F E+ +R +
Sbjct: 456 SAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSS 515
Query: 166 VVVWTSMINGYISCGDI-VSARCLFELAPERDVILWNTIV----------SGYID----- 209
V W ++I G G VS + +L +R I N+I +G +D
Sbjct: 516 VSPWNAIICGLAMHGHANVSLKLFSQL--QRVRIKPNSITFIGVLSACCHAGLVDTGEKY 573
Query: 210 ---VRNMI-----------------------EARKLFDQMP-KKDVISWNTMLSGYANNG 242
++N+ EA ++ +MP K DV+ W T+L+ +G
Sbjct: 574 FKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHG 633
Query: 243 DVEECKRLFEEMPERNV 259
+VE +R E + + ++
Sbjct: 634 NVEIGERAAENLAKLDI 650
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 284/521 (54%), Gaps = 44/521 (8%)
Query: 42 TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM----KKLDAM 97
+A A + +A +FD+I + +N + G A R V L+T+M
Sbjct: 20 SAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVR 79
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ TFP VL++C + A G ++H V+K G ++ FV ALI +++
Sbjct: 80 PDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHA----------- 128
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
SCG++ A LF+ D + W+ +++G ++ AR
Sbjct: 129 --------------------SCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAAR 168
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
LFD+ P KD++SWN M++ YA GD+ + LF+++PER+V SWN +I GY G
Sbjct: 169 DLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH 228
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE----YNGYQGNVCVG 333
L+ F++M G P+ T++++LSACA G LD + +H NG+ V +G
Sbjct: 229 ALELFEQMQRMGEK-PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFP--VVLG 285
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
NALIDMYAKCG +++A +VF SM KD+ TWN+I+ GLA+HG ++ +F +M
Sbjct: 286 NALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVR 345
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+ +L AC+H G+V++G +F M Y + P I+HYGCMVD+L RAG L EA +
Sbjct: 346 PDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFE 405
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
F+ M E ++VIW LL +CRV+ +ELA+ A +L + ++V+LSNIY +G
Sbjct: 406 FIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGE 465
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELD 554
W +++ M D+G K S ++ ++ G L ++++
Sbjct: 466 WFGSEKMRKLMDDSGVNK--EADSERLHHRLLFGFLVKQIN 504
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 60/372 (16%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV +G E ++ +I A + A +FD ++ V+W+AM G A+
Sbjct: 103 QVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRG 162
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF D P +K V N
Sbjct: 163 DIGAARDLF------DECP--------VKDLVSWN------------------------- 183
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPER 195
+I Y+ + A ++F ++ ER+VV W MI+GY+ CG + A LFE + +
Sbjct: 184 VMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKP 243
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK------DVISWNTMLSGYANNGDVEECKR 249
D++ +++S D ++ ++L + V+ N ++ YA G ++
Sbjct: 244 DIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHE 303
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +++V +WN ++GG A +G E +D F++ML +G+V P++ T V VL AC+ G
Sbjct: 304 VFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKML-KGKVRPDEITFVAVLIACSHGG 362
Query: 310 ALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLIT 363
+D F+ H Y + N+ ++DM + G+++ A + ++M + + +
Sbjct: 363 MVDKGREFFNLMQHKYR----VEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 364 WNTIISGLAMHG 375
W T++S +HG
Sbjct: 419 WRTLLSACRVHG 430
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 42/285 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ M AR++FD++ +++VVSWN M +GY + H + LF QM+++ P+
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPD 244
Query: 100 CFTFPIVLKSCVKINALREGEELHC----LVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
T +L +C L G+ LH + +NGF + +G ALI++Y+ ++++A+
Sbjct: 245 IVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSMKSAH 302
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
+VF M +++V W S++ G G ++ + +FE
Sbjct: 303 EVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFE------------------------- 337
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYA 270
K+ + D I++ +L ++ G V++ + F M E N+ + ++
Sbjct: 338 --KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLG 395
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
GL E + M E PN T+LSAC G ++ +K
Sbjct: 396 RAGLLKEAFEFIDTMKCE----PNSVIWRTLLSACRVHGEIELAK 436
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 311/609 (51%), Gaps = 85/609 (13%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
++S+ L K LHQ ++ GL+ ++ +++ A + A+ +FDK++ NV
Sbjct: 34 SNSKALHQGKQLHQ---HIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVF 90
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+W A+ Y++N V +++MK +P+ + FP V ++C ++ L G ++H V
Sbjct: 91 AWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDV 150
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------ 180
+ G ++ V +LI++YS + + +VF EM ER+V+ W SMI+GY+ G
Sbjct: 151 VICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSV 210
Query: 181 -------------------DIVSARC----------LFELAPERDVILWNTIVSGYIDVR 211
++ A C +FE E ++I T+VSGY +
Sbjct: 211 ELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIG 270
Query: 212 NMIEARKLFDQMPKK-----DVISWNTML--------------------------SGYAN 240
N ++ +F +M + D+ S +++L S Y +
Sbjct: 271 NHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKS 330
Query: 241 NGDV-----EECKRL------FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
G +CKR+ FE M +V +WN +I G+ + + L+ F +M G
Sbjct: 331 AGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSG 390
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ N TI TVL AC L K VH Y N + + V NALI MY+KCG I A
Sbjct: 391 -IMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTA 445
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+F++M ++DL++WNT+I G MHG G AL L +M ++ P+ +TF L AC+H
Sbjct: 446 YSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHS 505
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
GLV+EG+ F +M D+ P +EH+ C+VDLLARA RL +AV F+++MP++ IW+
Sbjct: 506 GLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSA 565
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
LL +CR +NV +A+LA E+L +LEP++ N+V LSNIY GRW D ++ M D G
Sbjct: 566 LLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDRGL 625
Query: 530 KKLPGCSSI 538
K G S I
Sbjct: 626 VKPSGYSWI 634
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 207/480 (43%), Gaps = 99/480 (20%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
F +L+ C AL +G++LH ++ G + F+ T L+++Y+ + +A +F +
Sbjct: 24 FQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDK 83
Query: 161 MDERNVVVWTSMINGYI------SCGDIVSARCLFELAPERDV----------ILW---- 200
+ + NV WT+++ Y C S L + P++ V +LW
Sbjct: 84 LSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVG 143
Query: 201 -------------------NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
N+++ Y ++ R++FD+M ++DV+SWN+M+SGY N
Sbjct: 144 IQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCN 203
Query: 242 GDVE-----------------------------------ECKRLFEEMPERNVFSWNGLI 266
G +E E +FE++ E N+ S L+
Sbjct: 204 GFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLV 263
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA--EYN 324
GY+ G + L F+ M++ FP+ ++ +VL +C LGAL + +H Y +
Sbjct: 264 SGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVD 323
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G AL+ MY KC I++A++VF MD D++TWN +I G G AL F
Sbjct: 324 SSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECF 383
Query: 385 HEMKNAGEMPDGITFIGILCAC-------THMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+M+ +G M + IT +L AC H + + S S++P +
Sbjct: 384 SKMQRSGIMNNQITISTVLPACDLKSGKQVHAYITKNSFS---------SVIPV---WNA 431
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++ + ++ G + A M I D V W ++G ++ L + AL+ L ++ +
Sbjct: 432 LIHMYSKCGCIGTAYSIFSNM-ISRDLVSWNTMIGGFGMHG---LGQFALQLLRDMSHSD 487
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 279/512 (54%), Gaps = 40/512 (7%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + A+ V+ ++ ++ + + FT+P VL++ + EG + H +K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GFR + + G++L+E+Y+ ++ A KVF EM R +V+W M+ YI CG +A L
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVAL 137
Query: 189 FE------LAPER--------------------------------DVILWNTIVSGYIDV 210
E + P+R ++ + N ++ Y
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDMYTKN 197
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ EA KLF+QMP +++ISW ++SGY G +++ + LF + E+++ W +I
Sbjct: 198 DCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACV 257
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+G F E L F+ M + RV P+ T+VT+L+ CA LGALD +W+H YAE + +
Sbjct: 258 QHGCFEEALTLFRDMQMQ-RVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDA 316
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+G ALIDMY+KCG IE +++VF M +D W II GLA +G+ AL LF +M+ +
Sbjct: 317 VLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRS 376
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PDG+TFIG+L AC H GLV+EG F +M Y I P++EHY C+V+LL RAG L E
Sbjct: 377 KVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDE 436
Query: 451 AVDFVKRMPIEADAV-IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
A + +PI DA+ ++ LL +C+ + NVE++E +R+ E + + +++SN+Y
Sbjct: 437 AERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYA 496
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RW+DV R++ M KK GCS IEV
Sbjct: 497 TASRWEDVIRVRGKMAHPTVKKNAGCSLIEVK 528
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 42/371 (11%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+ V +G Y ++ L ++ ARK+FD++ + +V WN M Y +
Sbjct: 69 RKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRC 128
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
++ V L QM++ P+ T + +C + L G +H + + N F N+ V
Sbjct: 129 GWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIH-VYMDNVFGFNLPVA 187
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+++Y+ +E A K+F +M RN++ WT +++GY G + AR LF E+D+I
Sbjct: 188 NALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLI 247
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMP---------------------------------- 224
LW +++ + EA LF M
Sbjct: 248 LWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYA 307
Query: 225 -----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
K D + ++ Y+ G +E+ +F M R+ +W +I G A NG L
Sbjct: 308 EQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRAL 367
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALID 338
+ F+ M +V P+ T + VLSAC G +D K H E + V + L++
Sbjct: 368 ELFQDM-QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVN 426
Query: 339 MYAKCGIIENA 349
+ + G+++ A
Sbjct: 427 LLGRAGLLDEA 437
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
Q+ AR +F++ +++++ W AM N Q+ + LF M+ P+ FT +L
Sbjct: 230 QLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLT 289
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
C + AL +GE +H + + + +GTALI++YS IE + +VF M R+
Sbjct: 290 CCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATA 349
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYIDVRNMIEARKL 219
WT++I G + G A LF+ V +L G +D E RK
Sbjct: 350 WTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVD-----EGRKQ 404
Query: 220 FDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
F M + V ++ +++ G ++E +RL ++P
Sbjct: 405 FHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVP 445
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 280/532 (52%), Gaps = 61/532 (11%)
Query: 30 LEKSDYITP-----------RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
L +SDY+T +II C + + A ++F + +N ++WN++ G +++
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 79 -----EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
E H+ LF ++ + P+ F++ I+L SC
Sbjct: 106 PSRMMEAHQ----LFDEIPE----PDTFSYNIML-SC----------------------- 133
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
Y E A F M ++ W +MI GY G++ AR LF
Sbjct: 134 -----------YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
E++ + WN ++SGYI+ ++ +A F P + V++W M++GY VE + +F++
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 254 MP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M +N+ +WN +I GY N + L F+ ML EG + PN + + + L C+ L AL
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQ 301
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ +H + +V +LI MY KCG + +A +F M KD++ WN +ISG A
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG AL LF EM + PD ITF+ +L AC H GLV G++YF+SM DY + PQ
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY CMVDLL RAG+L EA+ ++ MP A ++ LLG+CRV+KNVELAE A E+L +
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +N A +V L+NIY RW+DVAR++ M+++ K+PG S IE+ V
Sbjct: 482 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 41/250 (16%)
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH-GRGAGALSLFH 385
Q + N +I + G I+ A+ VF+ M K+ ITWN+++ G++ R A LF
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 386 EMKNAGEMPDGITFIGILCACTHMGL-VEEGLSYFQSMAMD------------------- 425
E+ PD ++ I+ +C + E+ S+F M
Sbjct: 118 EIPE----PDTFSY-NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEME 172
Query: 426 ------YSIVPQIE-HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
YS++ + E + M+ G L +A F K P+ V W ++ K
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG-VVAWTAMITGYMKAK 231
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
VELAE + +T KN + + + Y + R +D ++ AM + G + P S +
Sbjct: 232 KVELAEAMFKDMT--VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR--PNSSGL 287
Query: 539 EVNEVVMLGC 548
+LGC
Sbjct: 288 ---SSALLGC 294
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 307/539 (56%), Gaps = 16/539 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV SGL+ I +++ ++ + A K+F ++ + V+WN M +GY Q+
Sbjct: 256 QLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSG 315
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ F +M +P+ TF +L S K L ++HC ++++ +IF+ +
Sbjct: 316 LMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTS 375
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
ALI+ Y + + A K+F + + +VVV+T+MI+GY+ G + A +F +++P
Sbjct: 376 ALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISP 435
Query: 194 -ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM----LSGYANNGDVEECK 248
E ++ ++ G + ++ R+L + KK + + + YA G +
Sbjct: 436 NEITLVSILPVIGGLLALK---LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 492
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F + +R++ SWN +I A + +D F++M G F + +I LSACA L
Sbjct: 493 EIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICF-DCVSISAALSACANL 551
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+ F K +H + + +V + LIDMYAKCG ++ A++VF++M K++++WN+II
Sbjct: 552 PSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSII 611
Query: 369 SGLAMHGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+ HG+ +L LFHEM + +G PD ITF+ I+ C H+G V+EG+ +F+SM DY
Sbjct: 612 AAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYG 671
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I PQ EHY C+VDL RAGRL+EA + VK MP DA +W LLG+ R++KNVELA++A
Sbjct: 672 IQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVAS 731
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
RL +L+P N +V++SN + + G W+ V +++ M++ +K+PG S IE+N++ L
Sbjct: 732 SRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHL 790
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 229/475 (48%), Gaps = 21/475 (4%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K + + V + G++ ++++ +I A + ++ A K+FD++ ++ V WN M
Sbjct: 147 LKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVM 206
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NGYA+ +V+ F+ M+ PN TF VL C + G +LH LV+ +G
Sbjct: 207 LNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGL 266
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-E 190
+ +L+ +YS + A K+F M + V W MI+GY+ G + + F E
Sbjct: 267 DFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYE 326
Query: 191 LAPE---RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGD 243
+ D I +++++ N+ R++ + + D+ + ++ Y
Sbjct: 327 MISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRG 386
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V +++F + +V + +I GY +NGL + L+ F R L + ++ PN+ T+V++L
Sbjct: 387 VSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMF-RWLVKVKISPNEITLVSILP 445
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
L AL + +H + G+ +G A+IDMYAKCG + A ++F + +D+++
Sbjct: 446 VIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVS 505
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM-----GLVEEGLSY 418
WN++I+ A + A+ +F +M +G D ++ L AC ++ G G
Sbjct: 506 WNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMI 565
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
S+A+D + ++D+ A+ G L A++ M E + V W +++ +
Sbjct: 566 KHSLALD------VYSESTLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSIIAA 613
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 220/491 (44%), Gaps = 27/491 (5%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ--NVVS 67
L + Q+ V+ + + Y RI+ A + KMF ++ + ++
Sbjct: 42 SNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRP 101
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN++ + + + + + +M P+ TFP ++K+CV + + E L V
Sbjct: 102 WNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVS 161
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G N FV ++LI+ Y I+ A K+F + +++ V+W M+NGY CG S
Sbjct: 162 SLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIK 221
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFD---QMPKKDVISW--------NTMLS 236
F L D I N + + V ++ ++ L D Q+ V+S N++LS
Sbjct: 222 GFSLM-RMDQISPNAVT--FDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLS 278
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
Y+ G ++ +LF M + +WN +I GY +GL E L F M++ G V P+
Sbjct: 279 MYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSG-VLPDAI 337
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T ++L + ++ L++ + +H Y + ++ + +ALID Y KC + A +F+
Sbjct: 338 TFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQC 397
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC---ACTHMGLVE 413
++ D++ + +ISG +G AL +F + P+ IT + IL + L
Sbjct: 398 NSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGR 457
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGC-MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
E + D + GC ++D+ A+ GR+ A + R+ + D V W +++
Sbjct: 458 ELHGFIIKKGFDNRC-----NIGCAVIDMYAKCGRMNLAYEIFGRLS-KRDIVSWNSMIT 511
Query: 473 SCRVYKNVELA 483
C N A
Sbjct: 512 RCAQSDNPSAA 522
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 24/342 (7%)
Query: 83 TVVVLFTQMKKLDAMPNCFTF---------PIVLKSCVKINALREGEELHCLVLKNGFRA 133
+V F KK + N + F ++L+ C + LR+G+++H V+ N
Sbjct: 5 SVAKRFVPYKKSLPLRNSYRFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISG 64
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDER--NVVVWTSMINGYISCGDIVSARCL--- 188
+ + ++ +Y+ + K+F +D R ++ W S+I+ ++ G + A
Sbjct: 65 DSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFK 124
Query: 189 ---FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANN 241
F ++P DV + +V + ++N L D + + ++++ Y
Sbjct: 125 MLCFGVSP--DVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEY 182
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G ++ +LF+ + +++ WN ++ GYA G V+ F M + ++ PN T V
Sbjct: 183 GKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMD-QISPNAVTFDCV 241
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LS CA +D +H +G + N+L+ MY+KCG ++A+ +F M D
Sbjct: 242 LSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADT 301
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
+TWN +ISG G +L F+EM ++G +PD ITF +L
Sbjct: 302 VTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLL 343
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
+L C+ L L K VH + N G+ ++ MYA CG N +F +D++
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 360 -DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ WN+IIS G AL+ + +M G PD TF ++ AC + +G+ +
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGIEF 155
Query: 419 F----QSMAMD------YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
S+ MD S++ YG +D+ AG+L + V ++ D VIW
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYG-KIDV---AGKLFDRV-------LQKDCVIWN 204
Query: 469 NLL---GSCRVYKNVELAELALERLTELEPKNPANF-----VMLSNIYGDLG 512
+L C +V + +L R+ ++ P N F V S + DLG
Sbjct: 205 VMLNGYAKCGASDSV-IKGFSLMRMDQISP-NAVTFDCVLSVCASKLLIDLG 254
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 301/530 (56%), Gaps = 9/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV SGL+ + ++T ++ +Q+ ARK+FD + ++V WN M GY QN
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F +LF +M P+ TF L S + ++L++ +E+H ++++G ++++ +
Sbjct: 192 FMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNS 251
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI- 198
ALI+LY + A K+F + ++V++T+MI+GY+ G A +F ++ +I
Sbjct: 252 ALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIP 311
Query: 199 ---LWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLF 251
+++I+ + + R+L + K ++ + +++ YA G ++ +F
Sbjct: 312 NALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIF 371
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ ++ WN +I ++ +G E + F++M EG + + T+ LSACA + AL
Sbjct: 372 GRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKY-DCVTVSAALSACANIPAL 430
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H + ++ ++ +ALI+MYAKCG + A VFN M K+ + WN+II+
Sbjct: 431 HYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAY 490
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG A +L+LFH M G PD ITF+ IL +C H G VE+G+ YF+ M +Y I Q
Sbjct: 491 GYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQ 550
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY CM DL RAG L EA + + MP A +W LLG+CRV+ NVELAE+A L
Sbjct: 551 MEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLL 610
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+LEPKN +++L+++ D G+W+ V +I+ M++ G +K+PGCS IEVN
Sbjct: 611 DLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVN 660
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 223/466 (47%), Gaps = 21/466 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
IQ ++ G + ++ +I A + AR+ FDK+ D++ V WN M NGY Q
Sbjct: 32 IQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGE 91
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + LF M +A P+ TF VL + G +LH LV+++G VG
Sbjct: 92 SDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNT 151
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERD 196
L+ +YS G+ + A K+F M + ++VVW MI GY+ G + A LF + D
Sbjct: 152 LVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPD 211
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE---ECK----- 248
I + + + + ++ + +++ + + VI L Y N+ ++ +C+
Sbjct: 212 SITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI-----LDVYLNSALIDLYFKCRDAVMA 266
Query: 249 -RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++F + ++ + +I GY NG+ + L+ F R L + ++ PN T ++L ACA
Sbjct: 267 CKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIF-RWLLQKKMIPNALTFSSILPACAG 325
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L A+ + +H Y N + VG+A+++MYAKCG ++ A +F + KD I WN+I
Sbjct: 326 LAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSI 385
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ + G+ A+ LF +M G D +T L AC ++ + G + +
Sbjct: 386 ITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYG-KEIHGFMIKGA 444
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+ ++++ A+ G+L A V + E + V W +++ +
Sbjct: 445 FESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVAWNSIIAA 489
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 191/419 (45%), Gaps = 81/419 (19%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ +TFP V+K C +N +R G+ + ++L+ GF ++FV ++LI+LY+ IE A +
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDV-------------- 197
F +M +++ V+W MINGY+ CG+ SA LF E P+
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 198 -------------------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
++ NT+V+ Y R + +ARKLFD MP+ D++ WN M+ GY
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGY 187
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
NG +++ LF EM + P+ T
Sbjct: 188 VQNGFMDDASMLFNEM--------------------------------ISAGIKPDSITF 215
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+ L + A +L K +H Y +G +V + +ALID+Y KC A +FN
Sbjct: 216 TSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTK 275
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D++ + +ISG ++G AL +F + +P+ +TF IL AC + ++ G
Sbjct: 276 FDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335
Query: 419 FQSMAMDYSIVPQIEHY----GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
Y I ++E ++++ A+ GRL A R+ I+ DA+ W +++ S
Sbjct: 336 H-----GYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIK-DAICWNSIITS 388
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 174/373 (46%), Gaps = 11/373 (2%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+ K + +I +V G+ Y+ +I + + A KMF+ T ++V + AM
Sbjct: 226 SSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMI 285
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+GY N ++ + +F + + +PN TF +L +C + A++ G ELH ++KN
Sbjct: 286 SGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELE 345
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL- 191
VG+A++ +Y+ ++ A+ +FG + ++ + W S+I + G A LF
Sbjct: 346 EKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQM 405
Query: 192 ---APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDV 244
+ D + + +S ++ + +++ M K D+ + +++ YA G +
Sbjct: 406 GMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKL 465
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ +F M E+N +WN +I Y +G + L F ML EG + P+ T +T+LS+
Sbjct: 466 NIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEG-IQPDHITFLTILSS 524
Query: 305 CARLGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
C G + D ++ E G + + D++ + G ++ A +V SM +
Sbjct: 525 CGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAAS 584
Query: 364 -WNTIISGLAMHG 375
W T++ +HG
Sbjct: 585 VWGTLLGACRVHG 597
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
VFP+ T V+ C L + K + G+ ++ V ++LI +YA G IE+A
Sbjct: 6 VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR 65
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
F+ M KD + WN +I+G G A+ LF +M ++ PD +TF +L
Sbjct: 66 RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEA 125
Query: 411 LVEEGLSYFQSM---AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+VE G + +D+ VP + + +V + ++ +L +A MP + D V+W
Sbjct: 126 MVEYGRQLHGLVVRSGLDF--VPLVGN--TLVTVYSKGRQLGDARKLFDMMP-QIDLVVW 180
Query: 468 ANLLG 472
++G
Sbjct: 181 NRMIG 185
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 296/505 (58%), Gaps = 22/505 (4%)
Query: 54 RKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKI 113
R++FD + ++ VV W + YAQ+ + V LF M + P+ +T +L +C ++
Sbjct: 209 RRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTEL 268
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYS---TGKAIEAAYKVFGEMDERNVVVWT 170
+ R G++LH L L+ G ++ V L+++Y+ G+++ A +VF M + NV+ WT
Sbjct: 269 GSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWT 328
Query: 171 SMINGYISCGD------IVSARCLFE-LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
++++GY+ G I+ + L E + P I +++++ ++ + R++
Sbjct: 329 ALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH--ITYSSMLKACANLGDQDSGRQIHTHC 386
Query: 224 PKKDV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
K ++ + N ++S YA +G +EE + F+++ E+N+ S++G + G + + +
Sbjct: 387 VKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDY- 445
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+RM F T +++SA A +G L + +H + G+ + +GN+L+ M
Sbjct: 446 -QIERMELGISTF----TFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSM 500
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y++CG + +A VF+ M+ ++I+W ++ISGLA HG A AL LFH+M AG P+ +T+
Sbjct: 501 YSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTY 560
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
I +L AC+H GLV+EG +F+ M + ++P++EHY CMVDLL R+G + +A+DF+ MP
Sbjct: 561 IAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMP 620
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
+ DA++W LLG+C+ + N+++ E+A + +LEP++PA +V+LSN+Y + G W VAR
Sbjct: 621 CQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVAR 680
Query: 520 IKVAMRDTGFKKLPGCSSIEVNEVV 544
I+ MRD K G S + V+ +
Sbjct: 681 IRSLMRDKNLMKEKGLSWMHVDNTI 705
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 15/259 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI T V S L + + +++ A+ + AR FD++ ++N+VS++ +G ++
Sbjct: 381 QIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSN 440
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ Q+++++ + FTF ++ + + L +G+ LH L LK GF ++ +G
Sbjct: 441 TYQDY-----QIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGN 495
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPER 195
+L+ +YS + A +VF EM++ NV+ WTSMI+G G A LF +
Sbjct: 496 SLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKP 555
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRL 250
+ + + ++S + E ++ F M K + + M+ +G VE+
Sbjct: 556 NDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDF 615
Query: 251 FEEMP-ERNVFSWNGLIGG 268
EMP + + W L+G
Sbjct: 616 INEMPCQVDALVWKTLLGA 634
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 225 KKDVISWNTMLSGYANNGDVEECKRLFEEMPE--RNVFSWNGLIGGYANNGLFFEVLDAF 282
+ D + N++L+ Y+ V + +F+ MP R++ SW + + NG E L F
Sbjct: 81 ETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLF 140
Query: 283 KRMLTEGRVFPNDATIVTVLSAC--ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
L EG + PN T+ AC + L L + + + + +V VG ALIDM+
Sbjct: 141 GETLEEG-LLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMF 199
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
AK G + VF+ + + ++ W +I+ A G A+ LF +M G PD T
Sbjct: 200 AKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLS 259
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR---LAEAVDFVKR 457
+L ACT +G G S+A+ + +VD+ A++ L A + R
Sbjct: 260 SMLSACTELGSFRLG-QQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNR 318
Query: 458 MPIEADAVIWANLL 471
MP + + + W LL
Sbjct: 319 MP-KHNVMAWTALL 331
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/536 (35%), Positives = 285/536 (53%), Gaps = 71/536 (13%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIIT-ACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
T HL Q+ + V + S T +++ A +L + YAR++FD NV ++AM
Sbjct: 21 TLAHLKQLHGRSVVTARAASQSTTFQLLRFASLRLSCLPYARRLFDSTPHPNVFLYSAML 80
Query: 73 NGYAQNEF-----HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+ YA H + + +++ PN F +P+VL++ I ++ +H
Sbjct: 81 SAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAACAI-GVQLVRSIHSHAC 139
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF AY V + TS+++GY G
Sbjct: 140 KSGFH---------------------AYDV----------IRTSLLDGYSRYG------- 161
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
M++ARKLFD + +++VISW ++SGYA G + +
Sbjct: 162 ------------------------MMLDARKLFDGLTERNVISWTALVSGYARAGKIGDA 197
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF+ MPER+V +WN +I G NGLF E + RM+ EG N T+ VLSAC
Sbjct: 198 IVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEGFQL-NGTTVSCVLSACGH 256
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LG L K VH YA + V N LIDMY KCG ++ A +F+ + L TWN++
Sbjct: 257 LGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTTWNSL 316
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ LA+HG A+++F EM++ G PD +TF+G+L ACTH G V+EGL+YF+ M +
Sbjct: 317 INCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVDEGLTYFKLMCDELR 376
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P+IEHYGC+VDLL RAGR +A++ + M ++ D VIW +LL +CR ++ +ELAE ++
Sbjct: 377 IEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACRTHRQLELAEFSV 436
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR-DTGFKKLPGCSSIEVNE 542
+L +L P N VML+N+Y + G W++V +I+ M+ D KKLPGCS IEV+
Sbjct: 437 RKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIEVDR 492
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 290/552 (52%), Gaps = 24/552 (4%)
Query: 11 QLETTK---HLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQN 64
QLE + L+Q+ ++ S + ++ R+I T C + ++YAR +F+ I +
Sbjct: 12 QLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPS 71
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V WN+M GY+ + ++ + +M + P+ FTFP VLK+C + ++ G +H
Sbjct: 72 VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHG 131
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K GF N++V T L+ +Y + +VF ++ + NVV W S+I+G+++
Sbjct: 132 FVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSD 191
Query: 185 ARCLFELAPERDVILWNTIVSGYI----DVRNMIEAR------------KLFDQMPKKDV 228
A F V TI+ + ++++ + F +V
Sbjct: 192 AIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNV 251
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
I +++ YA GD+ + LF+ MPER + SWN +I GY+ NG E L F ML
Sbjct: 252 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G + P+ T ++V+ A G + +H Y G+ + + AL++MYAK G E+
Sbjct: 312 G-IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACT 407
A F ++ KD I W +I GLA HG G ALS+F M+ G PDGIT++G+L AC+
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H+GLVEEG YF M + + P +EHYGCMVD+L+RAGR EA VK MP++ + IW
Sbjct: 431 HIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIW 490
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
LL C +++N+EL + + E E +V+LSNIY GRW DV I+ +M+
Sbjct: 491 GALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSK 550
Query: 528 GFKKLPGCSSIE 539
K+ G SS+E
Sbjct: 551 RVDKVLGHSSVE 562
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 250/469 (53%), Gaps = 47/469 (10%)
Query: 120 EELHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
+HCL+LK G + TAL+ Y+ + + A ++F EM E+ +V T+M +++
Sbjct: 30 SSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVA 89
Query: 179 CGDIVSARCLF-------------ELA-----------------P-------------ER 195
G A +F LA P E
Sbjct: 90 SGQAAQAIAVFGDMVADGVFPDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIEP 149
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
DV + ++ Y + + +R++FD MP + I+WN ML YA +G V+ LF MP
Sbjct: 150 DVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYELFLAMP 209
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--VFPNDATIVTVLSACARLGALDF 313
R+V SWN ++ GY G E L F++M++ V PN T+ T+L ACA G L+
Sbjct: 210 RRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLET 269
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLA 372
WVH Y E N + + LIDMY KCG I+NA+ VF K DL +W T+I GLA
Sbjct: 270 GIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLA 329
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
MHGR AL +F M++ G PD +T +G+L AC H GLV+EGL YF SM + I P+I
Sbjct: 330 MHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKI 389
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCM+DLL R GRL EA ++ MP++ + VIW L +C+V+ N+EL ++A E LT
Sbjct: 390 EHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTR 449
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L+P +P VMLS++Y W +AR + M KK PGCSSIE+
Sbjct: 450 LDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELK 498
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 177/396 (44%), Gaps = 52/396 (13%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
L ++ +++A A L +AR++FD++ +Q +V AM + + + +F
Sbjct: 42 LHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFG 101
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINAL----REGEELHCLVLKNGFRANIFVGTALIELY 145
M P+ + L +C + G+++H L++ +G ++FV T LI +Y
Sbjct: 102 DMVADGVFPDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVY 161
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ + +VF +M R+ + W +M++ Y G + +A LF P RDV+ WNT+++
Sbjct: 162 GECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMA 221
Query: 206 GYIDVRNMIEARKLFDQM--PKK-----DVISWNTMLSGYANNGDVEE------------ 246
GY EA LF QM P +V + +T+L A G +E
Sbjct: 222 GYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNR 281
Query: 247 ---------------CK--------RLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF 282
CK ++FE+ P +R++FSW +I G A +G + L F
Sbjct: 282 MNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMF 341
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVCVGNALIDMY 340
M G + P+D T+V VL+ACA G +D + + A++ + +ID+
Sbjct: 342 DMMQDNG-ICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFR-ITPKIEHYGCMIDLL 399
Query: 341 AKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHG 375
+ G ++ A + +M + + W +S +HG
Sbjct: 400 GRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHG 435
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 129/342 (37%), Gaps = 83/342 (24%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I +VTSG+E +++ +I + ++ +R++FD + ++ ++WNAM + YA++
Sbjct: 137 KIHALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYARHG 196
Query: 80 FHRTVVVLFTQMKKLDAM----------------------------------PNCFTFPI 105
T LF M + D + PN T
Sbjct: 197 KVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMST 256
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L +C L G +H + +N + ++ LI++Y +I+ A +VF
Sbjct: 257 ILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVF------- 309
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAP-ERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
E AP +RD+ W T++ G +A ++FD M
Sbjct: 310 ------------------------EKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQ 345
Query: 225 K----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D ++ +L+ A+ G V+E F M + F I Y G ++L
Sbjct: 346 DNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK--FRITPKIEHY---GCMIDLLG 400
Query: 281 AFKRMLTEG----RVFPNDATIV---TVLSACARLGALDFSK 315
R L E R P D V LSAC G ++ K
Sbjct: 401 RVGR-LQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGK 441
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 293/522 (56%), Gaps = 33/522 (6%)
Query: 26 VTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+ G+ + D ++ +I+ ++ ++ ARK+FDK+ D+NVV+W M +GY + F +
Sbjct: 191 IFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDG 250
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+LF M++ N T ++L++C + EG ++H LVL GF + ++ ++I +
Sbjct: 251 FILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITM 310
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
YS +I+AA K F+L ++D++ WN+++
Sbjct: 311 YSRCYSIDAAAK-------------------------------QFDLMVKKDIVTWNSLI 339
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+GY+ N+ +A LF+ MP+KDV+SW T++ G+A+ G ++E LF+ MPE++ +W
Sbjct: 340 TGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTA 399
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I G + + F +ML + + PN T+ VLSA A + L+ +H
Sbjct: 400 VISGLVSIEEYEIAFHWFIKML-QSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKM 458
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ ++ + N+L+ MY+KCG +++A+ +F + +++ +NTII+GLA +G G AL +F
Sbjct: 459 SMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIF 518
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+M++ +P+ ITF+G+L AC H+GLVEEG YF M Y I P+ +HY CMVDLL R
Sbjct: 519 TKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCR 578
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG EAV V MP + +W +LG+ + +++AELA + L ELEP + +V+L
Sbjct: 579 AGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVIL 638
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
SN++ G + I++ + G KK PGCS I + + V L
Sbjct: 639 SNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHL 680
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
I+ A +F M +N V WT+++ Y +I AR +F P+ +V +N +++ Y
Sbjct: 63 IKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAY-HR 121
Query: 211 RNMI-EARKLFDQMPKKDVISWNTMLS-----------------------------GYAN 240
RNM+ EA +LF MP+++ +S+ TM++ GY+
Sbjct: 122 RNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSK 181
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM--------------- 285
G VE+ R+F+ M E++V SW+ +I G G E F +M
Sbjct: 182 VGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGY 241
Query: 286 -----LTEGRVF----------PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
L +G + N T+ +L AC +H G+ +
Sbjct: 242 MKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDA 301
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ N++I MY++C I+ A F+ M KD++TWN++I+G G A+ LF M
Sbjct: 302 YLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQK 361
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
D +++ ++C G ++E + FQ M
Sbjct: 362 ----DVVSWTTLICGFASEGRIDEFIGLFQMM 389
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 191/488 (39%), Gaps = 119/488 (24%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++TA A+ ++ AR++F+KI D NV S+NAM Y + LF+ M + N
Sbjct: 84 LLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQ----RN 139
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V E+LH + I LI YS +E A ++F
Sbjct: 140 SVSYATMITGFVHAGMFDMAEKLH------REKPVIVSSNVLINGYSKVGRVEDAVRIFD 193
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M E++VV W+SMI+G G IV AR LF+ P+R+V+ W ++ GY+ + + + L
Sbjct: 194 GMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFIL 253
Query: 220 FDQMPKK-------------------------------------DVISW--NTMLSGYAN 240
F M ++ DV ++ N++++ Y+
Sbjct: 254 FLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSR 313
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
++ + F+ M ++++ +WN LI GY +G + + F+ M P
Sbjct: 314 CYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENM-------P------- 359
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
Q +V LI +A G I+ + +F M KD
Sbjct: 360 --------------------------QKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKD 393
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF- 419
I W +ISGL A F +M + P+ T +L A M ++ +GL
Sbjct: 394 AIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHA 453
Query: 420 ----QSMAMDYSI-------------------------VPQIEHYGCMVDLLARAGRLAE 450
SM D SI VP + Y ++ LA+ G E
Sbjct: 454 IVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKE 513
Query: 451 AVDFVKRM 458
A++ +M
Sbjct: 514 ALEIFTKM 521
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 50/245 (20%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G I A +F P ++ + W +++ Y + + +AR++F+++P +V S+N M++ Y
Sbjct: 61 GCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYH 120
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
V+E LF MP+RN S+ +I G+ + G+F D +++ E V
Sbjct: 121 RRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMF----DMAEKLHREKPV-------- 168
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+ N LI+ Y+K G +E+AV +F+ M K
Sbjct: 169 ------------------------------IVSSNVLINGYSKVGRVEDAVRIFDGMAEK 198
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG--ITFIGILCACTHMGLVEEGLS 417
D+++W+++ISGL G+ A LF +MPD +T+ ++ M +++G
Sbjct: 199 DVVSWSSMISGLCRVGKIVEARKLF------DKMPDRNVVTWTLMIDGYMKMNFLKDGFI 252
Query: 418 YFQSM 422
F +M
Sbjct: 253 LFLNM 257
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 264/465 (56%), Gaps = 38/465 (8%)
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
R ELH V++ G ++ V L Y+ ++ + + G + + +TS I+ +
Sbjct: 38 RRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAH 97
Query: 177 ISCG----------DIVSARCL--------------------------FELAPERDVILW 200
S G D++S L F+LA D +
Sbjct: 98 SSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSLGRALHAYAFKLALSGDSYVA 157
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
++S Y + AR LFD+MP V+S ML+ YAN G +++ +RLF+ +P ++
Sbjct: 158 TALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFI 217
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
WN +I GY +G E L F+RML P++ T+V VLSA A+LG ++ KW+H Y
Sbjct: 218 CWNAMIDGYTQHGKPNEALQLFRRML-RSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSY 276
Query: 321 AEYNG-YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+ + Q NV V AL+DMY KCG +E+AV VF+ + KD++ WN +I+G AMHG
Sbjct: 277 VKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRK 336
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL +F ++++ G P ITFIG+L AC+H GLVEEG S+FQSM +Y I P+IEHYGCMV
Sbjct: 337 ALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMV 396
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAG + EA V+ + I DAV+W +LL +CR++KN+ L + + L N
Sbjct: 397 DLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSG 456
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++LSNIY +G+W++VAR++ M+ +G +K PGCS+IE++ V
Sbjct: 457 MYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKV 501
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 170/408 (41%), Gaps = 54/408 (13%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
T + ++ VV GL+ + R+ A A ++ ++ + + D + + +
Sbjct: 35 STARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAI 94
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+ ++ H + L + M +P T L +C L G LH K
Sbjct: 95 HAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC---RGLSLGRALHAYAFKLALS 151
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ +V TAL+ +Y+ AA +F EM + +VV T+M+ Y + G + AR LF+
Sbjct: 152 GDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGL 211
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD--------------VISWNTMLSG- 237
P +D I WN ++ GY EA +LF +M + V T+ SG
Sbjct: 212 PRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGK 271
Query: 238 -------------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
Y G +E+ +F + +++ WN +I GYA +
Sbjct: 272 WLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMH 331
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQ 327
G + L+ F ++ +G ++P D T + +L+AC+ G ++ F H Y G
Sbjct: 332 GDSRKALEMFVQLRDQG-LWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEY----GID 386
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMH 374
+ ++D+ + G+IE A + S+ T D + W ++++ +H
Sbjct: 387 PKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLH 434
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 266/515 (51%), Gaps = 49/515 (9%)
Query: 78 NEFHRTVVVLFTQMKKLDAM--------PNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
N F + +L Q + +A+ P+ T+ +L+ C+++ AL EG ++H +
Sbjct: 59 NNFKEAIDILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTS 118
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF + + ++++Y ++ A ++F EM ER++ W MI+GY G + AR LF
Sbjct: 119 GFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLF 178
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----------------------- 226
+ ERD W + SGY+ EA +LF M +
Sbjct: 179 DQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSL 238
Query: 227 -----------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
D + W+ + Y G + E + +F++ +R+V SW +I Y
Sbjct: 239 HLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRY 298
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
G E F +L G ++PN+ T VL+ACA A + K VH Y G+ +
Sbjct: 299 FKEGRREEGFALFSDLLKSG-IWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPS 357
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
+ L+ MY KCG I+NA VFN M DL++W ++ISG A +G+ AL F +
Sbjct: 358 SFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLK 417
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
+G PD ITF+G+L ACTH GLV++GL YF S+ + + +HY C++DLL+R+GRL
Sbjct: 418 SGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQ 477
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA D + +MPIE D +WA+LLG CR++ N++LA+ A E L E+EP+NPA + L+NIY
Sbjct: 478 EAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYA 537
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
G W VA ++ M G K PG S IE+ V
Sbjct: 538 TAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREV 572
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 165/378 (43%), Gaps = 74/378 (19%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+I+ A+ ++ ARK+FD++T+++ SW AM +GY +++ H + LF M++ +
Sbjct: 161 MISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKC 220
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N FT L + I +L G+E+H +L+ G + V +AL ++Y +I A +F
Sbjct: 221 NKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIF 280
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLF----------------------------E 190
+ +R+VV WT+MI+ Y G LF E
Sbjct: 281 DKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEE 340
Query: 191 LAPE-----------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
L + +T+V Y N+ AR++F+ MP+ D++SW +++SGYA
Sbjct: 341 LGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYA 400
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
NG +E + FE +L + P+ T V
Sbjct: 401 QNGQPDEALQFFE--------------------------------LLLKSGTQPDHITFV 428
Query: 300 TVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
VLSAC G +D ++ E +G LID+ ++ G ++ A D+ + M
Sbjct: 429 GVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPI 488
Query: 359 K-DLITWNTIISGLAMHG 375
+ D W +++ G +HG
Sbjct: 489 EPDKFLWASLLGGCRIHG 506
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 10/259 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++ GL+ + + + + AR +FDK D++VVSW AM + Y +
Sbjct: 243 EIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEG 302
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF+ + K PN FTF VL +C A G+++H + + GF + F +
Sbjct: 303 RREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAAS 362
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APER 195
L+ +Y+ I+ A +VF M ++V WTS+I+GY G A FEL +
Sbjct: 363 TLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQP 422
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRL 250
D I + ++S + + + FD + +K ++ + ++ + +G ++E + +
Sbjct: 423 DHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDI 482
Query: 251 FEEMP-ERNVFSWNGLIGG 268
++MP E + F W L+GG
Sbjct: 483 IDKMPIEPDKFLWASLLGG 501
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/407 (39%), Positives = 242/407 (59%), Gaps = 2/407 (0%)
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T L+ +++G A + A ++F M R+V W +M++G G + A+ +F P R+ +
Sbjct: 85 TLLLCHFASGDA-DGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSV 143
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEECKRLFEEMPER 257
WN +VSG+ +M A + F P+K D + W M+SGY + G+V + + FE MP R
Sbjct: 144 SWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVR 203
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
N+ SWN ++ GY N + L F+ M+ E V PN +T+ +VL C+ L AL F K +
Sbjct: 204 NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI 263
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H + N+ VG +L+ MY KCG + +A +F M T+D++ WN +ISG A HG G
Sbjct: 264 HQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDG 323
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A++LF MK+ G P+ ITF+ +L AC H GL + G+ F+ M Y I P+++HY C
Sbjct: 324 KEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSC 383
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
MVDLL RAG+L AVDF++ MP E + LL +CRVYKN+E AELA +L E +P++
Sbjct: 384 MVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQS 443
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V L+NIY +W DV+R++ M+D K PG S IE+ V+
Sbjct: 444 AGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVL 490
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 174/434 (40%), Gaps = 59/434 (13%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISC-GDIVSARCLFELAPERDVILWNTIVSGYID 209
+ A + F + + ++ GY G + AR LF+ P DV+ +NT++ +
Sbjct: 33 LAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHFA 92
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+ AR+LF MP +DV SWNTM+SG + +G VEE K +F MP RN SWN ++ G+
Sbjct: 93 SGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGF 152
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
A +G + F+ + DA + T
Sbjct: 153 ACSGDMSTAEEWFRNAPEK-----EDAVLWT----------------------------- 178
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM-K 388
A++ Y G + A+ F +M ++L++WN +++G + AL LF M +
Sbjct: 179 -----AMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVR 233
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
A P+ T +L C+++ + G Q M + + +V + + G L
Sbjct: 234 EANVQPNASTLSSVLLGCSNLSALGFGKQIHQ-WCMKLLLSRNLTVGTSLVSMYCKCGDL 292
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--LEPKNPANFVMLSN 506
+ A M D V W ++ + + + A ER+ + +EP V+L+
Sbjct: 293 SSACILFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLT- 350
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE--VVMLGCLSRELDRKSIVRAEAN 564
A I + D G + G + E V C+ L R + +
Sbjct: 351 -----------ACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVD 399
Query: 565 MIKLLPQNNHPLTF 578
I+ +P HP +
Sbjct: 400 FIRSMPFEPHPSAY 413
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 149/346 (43%), Gaps = 82/346 (23%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++F + ++V SWN M +G +++ V+F AMP +++ V
Sbjct: 99 ARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFL------AMP--------VRNSVS 144
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTS 171
NA+ G ++ + A + F E+ + V+WT+
Sbjct: 145 WNAMVSG-------------------------FACSGDMSTAEEWFRNAPEKEDAVLWTA 179
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK------ 225
M++GY+ G++V A FE P R+++ WN +V+GY+ + +A +LF M +
Sbjct: 180 MVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQP 239
Query: 226 ---------------------KDVISW-------------NTMLSGYANNGDVEECKRLF 251
K + W +++S Y GD+ LF
Sbjct: 240 NASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILF 299
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
EM R+V +WN +I GYA +G E ++ F+RM EG V PN T V VL+AC G
Sbjct: 300 GEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEG-VEPNWITFVVVLTACIHTGLC 358
Query: 312 DFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
DF + E G + V + ++D+ + G +E AVD SM
Sbjct: 359 DFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSM 404
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 15/238 (6%)
Query: 31 EKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF- 88
EK D + +++ + + A K F+ + +N+VSWNA+ GY +N + LF
Sbjct: 170 EKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFR 229
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
T +++ + PN T VL C ++AL G+++H +K N+ VGT+L+ +Y
Sbjct: 230 TMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKC 289
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD---------VIL 199
+ +A +FGEM R+VV W +MI+GY GD A LFE + V+L
Sbjct: 290 GDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVL 349
Query: 200 WNTIVSGYID--VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
I +G D ++ ++L+ P+ D ++ M+ G +E MP
Sbjct: 350 TACIHTGLCDFGIQCFEGMQELYGIEPRVD--HYSCMVDLLCRAGKLERAVDFIRSMP 405
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
K +HQ +++ L ++ + +++ + ++ A +F ++ ++VV+WNAM +GY
Sbjct: 261 KQIHQWCMKLL---LSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGY 317
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
AQ+ + + LF +MK PN TF +VL +C+
Sbjct: 318 AQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACI 353
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 298/517 (57%), Gaps = 34/517 (6%)
Query: 26 VTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+ G+ + D I+ ++ + ++ +AR++F+++ ++NVV+W AM +G+ + +
Sbjct: 181 IFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVG 240
Query: 85 VVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
LF +M+K + N T ++ ++C + +EG ++H LV + GF ++F+G A+I
Sbjct: 241 FGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIII 300
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
+Y +V AR +F++ +DV+ WN +
Sbjct: 301 MYC-------------------------------RFSFVVEARKIFDMMNRKDVVSWNAL 329
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
++GY+ + E LF++ +KDVISW TM++G++N G + + LF MP+++ +W
Sbjct: 330 IAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWT 389
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G+ NG + E + F ML + V PN T+ +VLSA A L L+ +H
Sbjct: 390 AVISGFVGNGEYEEAIYWFIEMLRK-VVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVK 448
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G + ++ + N+L+ MY KCG + + +F S+++ +++++N++I+G A +G G AL L
Sbjct: 449 MGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALEL 508
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
FH+M N G+ P+ ITF+G+L ACTH+GL+E+G +YF+SM Y I P HY C+VDLL
Sbjct: 509 FHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLG 568
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG L +A+D ++ MP E + +W LLG+ R++ +++A+LA +++ +LEP N A + +
Sbjct: 569 RAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAV 628
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
LS +Y GR +D ++++A G KK G S I V
Sbjct: 629 LSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 665
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 43/384 (11%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
IT + + A +F ++ +N +SW AM Y +N +F +M +
Sbjct: 38 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA--- 94
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
++ ++ + + N + GE A K+F E
Sbjct: 95 -SYNAMITAYTRSNPMMIGE---------------------------------ASKLFAE 120
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDVRNMIEARK 218
M ERN + + +MI G G + +A L+ P RD + N ++SGY+ V + EA +
Sbjct: 121 MRERNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATR 180
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+F+ M ++DVISW++M+ GY G + + LFE MPERNV +W +I G+ G +
Sbjct: 181 IFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVG 240
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
F RM EG V N T+ + AC+ G +H G++ +V +GNA+I
Sbjct: 241 FGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIII 300
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY + + A +F+ M+ KD+++WN +I+G + LF + + D I+
Sbjct: 301 MYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQK----DVIS 356
Query: 399 FIGILCACTHMGLVEEGLSYFQSM 422
+ ++ ++ G + + + F+ M
Sbjct: 357 WTTMITGFSNKGKMGKSIELFRMM 380
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/666 (22%), Positives = 249/666 (37%), Gaps = 151/666 (22%)
Query: 14 TTKHLHQIQTQVVTSG----LEKSDYITPRI-----------ITACAQLKQMTYARKMFD 58
TTK L +Q+ G L++++ I R+ +TA + + ARKMF+
Sbjct: 27 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 86
Query: 59 KITDQNVVSWNAMFNGYAQNE--FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
K+ + S+NAM Y ++ LF +M++ N ++ ++ + +
Sbjct: 87 KMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRE----RNSISYAAMITGLARAGMV 142
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
EEL+ L +R + ALI Y +E A ++F M ER+V+ W+SM++GY
Sbjct: 143 DNAEELY-LETPVEWRDPV-CSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGY 200
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK---------- 226
G I AR LFE PER+V+ W ++ G++ + LF +M K+
Sbjct: 201 CKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTL 260
Query: 227 ------------------------------DVISWNTMLSGYANNGDVEECKRLFEEMPE 256
DV N ++ Y V E +++F+ M
Sbjct: 261 TVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNR 320
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
++V SWN LI GY N + EG V F K
Sbjct: 321 KDVVSWNALIAGYVQND-----------EVEEGYVL--------------------FEK- 348
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
Q +V +I ++ G + ++++F M +D I W +ISG +G
Sbjct: 349 --------TQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGE 400
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF-----QSMAMDYSI--- 428
A+ F EM P+ +T +L A + + +GL M D SI
Sbjct: 401 YEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNS 460
Query: 429 ----------------------VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
P I + M+ A+ G EA++ +M E
Sbjct: 461 LVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPN 520
Query: 467 WANLLGSCRVYKNVELAEL------ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
LG +V L E +++ L ++EP P ++ + ++ G G D +
Sbjct: 521 EITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEP-GPHHYACIVDLLGRAGFLDDAIDL 579
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMI-KLLPQNNHPLTFI 579
+ +P C +LG SR R + + A I KL P N P +
Sbjct: 580 --------IRSMP-CEPHSGVWGALLGA-SRIHLRLDVAKLAAQQIFKLEPDNAAPYAVL 629
Query: 580 VVIFST 585
++S+
Sbjct: 630 SFLYSS 635
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L T QI T VV G+E I +++ + + ++F I N+VS+
Sbjct: 430 SAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSF 489
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
N+M G+AQN F + LF +M PN TF VL +C + L +G
Sbjct: 490 NSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQG 540
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/522 (32%), Positives = 293/522 (56%), Gaps = 33/522 (6%)
Query: 26 VTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+ G+ + D ++ +I+ ++ ++ ARK+FDK+ D+NVV+W M +GY + F +
Sbjct: 199 IFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDG 258
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+LF M++ N T ++L++C + EG ++H LVL GF + ++ ++I +
Sbjct: 259 FILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITM 318
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
YS +I+AA K F+L ++D++ WN+++
Sbjct: 319 YSRCYSIDAAAK-------------------------------QFDLMVKKDIVTWNSLI 347
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+GY+ N+ +A LF+ MP+KDV+SW T++ G+A+ G ++E LF+ MPE++ +W
Sbjct: 348 TGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTA 407
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I G + + F +ML + + PN T+ VLSA A + L+ +H
Sbjct: 408 VISGLVSIEEYEIAFHWFIKML-QSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKM 466
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ ++ + N+L+ MY+KCG +++A+ +F + +++ +NTII+GLA +G G AL +F
Sbjct: 467 SMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIF 526
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+M++ +P+ ITF+G+L AC H+GLVEEG YF M Y I P+ +HY CMVDLL R
Sbjct: 527 TKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCR 586
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG EAV V MP + +W +LG+ + +++AELA + L ELEP + +V+L
Sbjct: 587 AGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVIL 646
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
SN++ G + I++ + G KK PGCS I + + V L
Sbjct: 647 SNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHL 688
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 65/332 (19%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
I+ A +F M +N V WT+++ Y +I AR +F P+ +V +N +++ Y
Sbjct: 71 IKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAY-HR 129
Query: 211 RNMI-EARKLFDQMPKKDVISWNTMLS-----------------------------GYAN 240
RNM+ EA +LF MP+++ +S+ TM++ GY+
Sbjct: 130 RNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSK 189
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM--------------- 285
G VE+ R+F+ M E++V SW+ +I G G E F +M
Sbjct: 190 VGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGY 249
Query: 286 -----LTEGRVF----------PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
L +G + N T+ +L AC +H G+ +
Sbjct: 250 MKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDA 309
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ N++I MY++C I+ A F+ M KD++TWN++I+G G A+ LF M
Sbjct: 310 YLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQ- 368
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
D +++ ++C G ++E + FQ M
Sbjct: 369 ---KDVVSWTTLICGFASEGRIDEFIGLFQMM 397
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 191/488 (39%), Gaps = 119/488 (24%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++TA A+ ++ AR++F+KI D NV S+NAM Y + LF+ M + N
Sbjct: 92 LLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQ----RN 147
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V E+LH + I LI YS +E A ++F
Sbjct: 148 SVSYATMITGFVHAGMFDMAEKLH------REKPVIVSSNVLINGYSKVGRVEDAVRIFD 201
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M E++VV W+SMI+G G IV AR LF+ P+R+V+ W ++ GY+ + + + L
Sbjct: 202 GMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFIL 261
Query: 220 FDQMPKK-------------------------------------DVISW--NTMLSGYAN 240
F M ++ DV ++ N++++ Y+
Sbjct: 262 FLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSR 321
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
++ + F+ M ++++ +WN LI GY +G + + F+ M P
Sbjct: 322 CYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENM-------P------- 367
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
Q +V LI +A G I+ + +F M KD
Sbjct: 368 --------------------------QKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKD 401
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF- 419
I W +ISGL A F +M + P+ T +L A M ++ +GL
Sbjct: 402 AIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHA 461
Query: 420 ----QSMAMDYSI-------------------------VPQIEHYGCMVDLLARAGRLAE 450
SM D SI VP + Y ++ LA+ G E
Sbjct: 462 IVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKE 521
Query: 451 AVDFVKRM 458
A++ +M
Sbjct: 522 ALEIFTKM 529
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 50/245 (20%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G I A +F P ++ + W +++ Y + + +AR++F+++P +V S+N M++ Y
Sbjct: 69 GCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYH 128
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
V+E LF MP+RN S+ +I G+ + G+F D +++ E V
Sbjct: 129 RRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMF----DMAEKLHREKPV-------- 176
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+ N LI+ Y+K G +E+AV +F+ M K
Sbjct: 177 ------------------------------IVSSNVLINGYSKVGRVEDAVRIFDGMAEK 206
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG--ITFIGILCACTHMGLVEEGLS 417
D+++W+++ISGL G+ A LF +MPD +T+ ++ M +++G
Sbjct: 207 DVVSWSSMISGLCRVGKIVEARKLF------DKMPDRNVVTWTLMIDGYMKMNFLKDGFI 260
Query: 418 YFQSM 422
F +M
Sbjct: 261 LFLNM 265
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 295/532 (55%), Gaps = 11/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V+ +G + +++ ++ A+ T+AR++FD++ ++N+VSW+AM +GY Q
Sbjct: 25 LHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGE 84
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + L++QM +PN + F V+ +C ++A+ G+++H LK G+ + FV +
Sbjct: 85 PQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNS 141
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI +Y A VF E N V + ++I G++ + F+L ++ +I
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPD 201
Query: 201 NTIVSGYIDV----RNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFE 252
G + + N+ +L Q K ++ S N +++ Y+ ++E ++ F
Sbjct: 202 RFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR 261
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ E++V SWN LI ++ + L FK M E V P+D T + L+ACA L ++
Sbjct: 262 LIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMS 321
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H + ++ VGNAL++MYAKCG I A D+F+ M +L++WNTII+G
Sbjct: 322 HGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFG 381
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G A+ LF +M +G PD +TFIG+L AC H GLV++G YF SM Y I P I
Sbjct: 382 NHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDI 441
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH+ C++D+L RAGRL EA +++++ P D V+ +LL + R++ +V + E + L +
Sbjct: 442 EHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLK 501
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+P + +V+LSN+Y G W VA + ++ +G KK PG S IEVN V
Sbjct: 502 LQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSV 553
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 181/400 (45%), Gaps = 16/400 (4%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T +L C K ALR G LH VLK G ++++F+ ++ +Y+ A +VF EM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE---LAPERDVILWNTIVSGYIDVRNMIEARK 218
E+N+V W++MI+GY G+ A L+ L P V + +++S + + +K
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYV--FASVISACASLSAVTLGQK 122
Query: 219 LFDQMPK--KDVISW--NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+ + K + IS+ N+++S Y + +F PE N S+N LI G+ N
Sbjct: 123 IHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQ 182
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
L+ FK M +G + P+ + VL C L +H +GN
Sbjct: 183 LERGLEFFKLMRQQGLI-PDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM- 393
+I MY++ +I+ A F ++ KD+I+WNT+I+ + A L +F M +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD TF L AC + + G + M + + +V++ A+ G + A D
Sbjct: 302 PDDFTFTSALAACAGLASMSHG-KQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+M + + V W ++ + N L E A+E ++
Sbjct: 361 IFSKM-VHHNLVSWNTIIAG---FGNHGLGERAVELFEQM 396
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 172/368 (46%), Gaps = 12/368 (3%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+I ++ + G E +++ +I+ + Q + A +F + N VS+NA+ G+ +N
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + F M++ +P+ F F VL C L+ G ELHC +K + F+G
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER--- 195
+I +YS I+ A K F ++E++V+ W ++I C D +F+ E
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 196 --DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + + ++ + +M +++ + + +D+ N +++ YA G +
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M N+ SWN +I G+ N+GL ++ F++M G + P+ T + +L+AC G
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASG-IRPDSVTFIGLLTACNHAG 419
Query: 310 ALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTI 367
+D + + + E G ++ + LIDM + G + A + D + ++
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 368 ISGLAMHG 375
+S +HG
Sbjct: 480 LSASRLHG 487
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
E K ++ Q V L+ + +I IIT ++L + A K F I +++V+SWN +
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Query: 73 NGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ + H + +F M ++ + P+ FTF L +C + ++ G+++H +++
Sbjct: 276 AACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRL 335
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++ VG AL+ +Y+ I AY +F +M N+V W ++I G+ + G A LFE
Sbjct: 336 YQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFE 394
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 14/220 (6%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H QI ++ + L + + ++ A+ + YA +F K+ N+VSWN +
Sbjct: 317 LASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTI 376
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE-ELHCLVLKNG 130
G+ + V LF QM P+ TF +L +C + +G+ + + G
Sbjct: 377 IAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYG 436
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN-VVVWTSMINGYISCGDIV----SA 185
+I + LI++ + A + + N VV S+++ GD+V A
Sbjct: 437 IAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLA 496
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ L +L P S Y+ + N+ + ++D + +
Sbjct: 497 KWLLKLQP--------VTTSPYVLLSNLYASDGMWDSVAE 528
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 269/475 (56%), Gaps = 21/475 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ + +M A ++FD + ++NVVSWNAM G+ QN + F +M + D+
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSA-- 225
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL--YSTGKAIEAAYKV 157
+ ++ ++ L E + + + V I L Y ++ A ++
Sbjct: 226 --SLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQL 283
Query: 158 F--------GEMD----ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
F G+ D ERNVV W SMI Y+ DI SAR LF+ ERD I WNT++S
Sbjct: 284 FDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMIS 343
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
GY+ + +M EA LF +MP D ++WN+M+SG+A G++E + LF +P++N+ SWN +
Sbjct: 344 GYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSM 403
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GY NNG + + +++ML +G P+ T+ +VLS C+ AL +H
Sbjct: 404 IAGYENNGDYKGATELYRQMLLQGEK-PDRHTLSSVLSVCSGFAALHLGMQIHQQITKTV 462
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLF 384
++ + N+LI MY++CG I A +F+ + K++I+WN +I G A HG A AL LF
Sbjct: 463 IP-DIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELF 521
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
MK P ITFI +L AC H G V+EG +F+SMA ++ I P+IEH+ +VD++ R
Sbjct: 522 ELMKRLKVRPTYITFISVLNACAHAGXVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGR 581
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
G+L EA+D + MP E D +W LLG+CRV+ NVELA +A E L +LEP++ A
Sbjct: 582 HGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSA 636
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 201/443 (45%), Gaps = 74/443 (16%)
Query: 121 ELHCLV-----LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
LHC V KN +++ I I A +F M +RN+V W SMI G
Sbjct: 48 HLHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITG 107
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN--MIEARKLFDQMPKKDVISWNT 233
Y+ ++ AR LF+ P+RDV+ WN ++SGY+ R + E R LFD+MP++D +SWNT
Sbjct: 108 YVRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNT 167
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
M+SGY +G ++E +LF+ M ERNV SWN ++ G+ NG ++ F RM
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPER----- 222
Query: 294 NDATIVTVLSACARLGALDFSK---------------WVHVY------------------ 320
+ A++ +++ + G LD +K VH Y
Sbjct: 223 DSASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQ 282
Query: 321 -----AEYNG-------YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
Y+G ++ NV N++I Y K I +A +F+ M +D I+WNT+I
Sbjct: 283 LFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMI 342
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SG A LF EM N PD +T+ ++ G +E + F +
Sbjct: 343 SGYVRMSDMEEAWMLFQEMPN----PDTLTWNSMISGFAQKGNLELARALF-------AT 391
Query: 429 VPQ--IEHYGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLGSCRVYKNVELA 483
+PQ + + M+ G A + ++M ++ D +++L C + + L
Sbjct: 392 IPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLG 451
Query: 484 ELALERLTE-LEPKNPANFVMLS 505
+++T+ + P P N +++
Sbjct: 452 MQIHQQITKTVIPDIPINNSLIT 474
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 262/465 (56%), Gaps = 44/465 (9%)
Query: 120 EELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC 179
+++H L+NG F+ L++L + A +F ++ + +V ++ I + S
Sbjct: 5 KQIHAYSLRNGLDHTKFLIEKLLQL----PDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60
Query: 180 G----------DIVSARC----------------LFELAPER-------------DVILW 200
G + S C LF + P + D+
Sbjct: 61 GHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAM 120
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
++ Y + + AR+LFD+MP +D+ +WN++++GYA +G +E LF +MP RNV
Sbjct: 121 TALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVI 180
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SW LI GYA NG + + L+ F + E PN+ +I +VL AC++LGALD K + Y
Sbjct: 181 SWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAY 240
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAG 379
A NG+ N V NA+++++A+CG IE A VF+ + +K +L +WNT+I GLA+HGR
Sbjct: 241 ARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCID 300
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL L+ +M PD +TF+G+L ACTH G+V EG F+SM + + P++EHYGC+V
Sbjct: 301 ALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLV 360
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAG L EA + ++ MP+ D+VIW LLG+C + NVEL E+A E L +LEP NP
Sbjct: 361 DLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPG 420
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
N+V+LSNIY G W VAR++ M+ K G S IEV + +
Sbjct: 421 NYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGI 465
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 188/403 (46%), Gaps = 52/403 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L QI + +GL+ + ++ +++ QL + YA +FD+I +V +N ++
Sbjct: 4 LKQIHAYSLRNGLDHTKFLIEKLL----QLPDLPYACTLFDQIPKPSVYLYNKFIQTFSS 59
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+L+ QM PN ++F + +C + + G+ LH K+GF +++F
Sbjct: 60 IGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFA 119
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
TAL+++Y+ + +A ++F EM R++ W S+I GY G + +A LF P R+V
Sbjct: 120 MTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNV 179
Query: 198 ILWNTIVSGY-----------------------------------------IDVRNMIEA 216
I W ++SGY +D+ IEA
Sbjct: 180 ISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEA 239
Query: 217 RKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM-PERNVFSWNGLIGGYANNGLF 275
+ K +S N +L +A G++EE +++F+E+ +RN+ SWN +I G A +G
Sbjct: 240 YARNNGFFKNAYVS-NAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRC 298
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN- 334
+ L + +ML ++ P+D T V +L AC G + + + E + +Q + +
Sbjct: 299 IDALQLYDQMLIR-KMRPDDVTFVGLLLACTHGGMVAEGRQLFESME-SKFQVAPKLEHY 356
Query: 335 -ALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
L+D+ + G ++ A ++ +M D + W T++ + HG
Sbjct: 357 GCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHG 399
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 277/526 (52%), Gaps = 64/526 (12%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+T HL +I + GL++S+ I ++ CA L+++ YA ++F + N+
Sbjct: 19 KTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHTHNPNI------- 71
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+LF + K ++ F S +K A+ E
Sbjct: 72 -------------LLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYT---------L 109
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
A +F + + Y G + A G R+ V + + Y SC
Sbjct: 110 APLFKSASNLRYYVLGGCVHAHVVRLGFT--RHASVRVAALEVYASC------------- 154
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
ER M +A K+FD+M DV+ WN M+ G+ GD+E ++F
Sbjct: 155 -ER-----------------MGDASKVFDEMRDPDVVVWNLMIRGFCKMGDLETGMKVFG 196
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+M ER V SWN ++ A N + L+ F ML +G P+DA++VTVL CARLGA+D
Sbjct: 197 QMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQG-FEPDDASLVTVLPVCARLGAVD 255
Query: 313 FSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+W+H YA G+ Q + VGN+L+D Y KCG ++ A +FN M +K++++WN +ISGL
Sbjct: 256 IGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGL 315
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A +G G ++LF EM + G P+ TF+G+L C H+GLV+ G F SM++ + + P+
Sbjct: 316 AYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPK 375
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGC+VDLL R G + EA D + MP++ A +W LL +CR Y + E+AE A + L
Sbjct: 376 LEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELV 435
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
LEP N N+V+LSN+Y + GRW +V +++V MR G KK+PG S+
Sbjct: 436 RLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQSA 481
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 285/494 (57%), Gaps = 5/494 (1%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNE--FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
F+K+ ++VV+W + +GYA+ E R + + + + +PN FT V++ C ++
Sbjct: 196 FEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLG 255
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI 173
LR G+ +H L +K G + +G A+ E Y +AI+ A +V+ M + ++ V S+I
Sbjct: 256 VLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLI 315
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
G +S G I A +F E + + +N ++ GY ++++LF++M +++ S NT
Sbjct: 316 GGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENLTSLNT 375
Query: 234 MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
M+S Y+ NG+++E +LF++ ERN SWN ++ GY NG + E L+ + M V
Sbjct: 376 MISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAM-RRLSVD 434
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
+ +T + AC+ L + + +H + +Q NV VG AL+D Y+KCG + A
Sbjct: 435 YSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRS 494
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F S+ + ++ W +I+G A HG G+ A+ LF M + G +P+ TF+G+L AC H GLV
Sbjct: 495 FISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLV 554
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
EGL F SM Y + P IEHY C+VDLL R+G L EA +F+ +MPIEAD +IW LL
Sbjct: 555 CEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLN 614
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+ +K++E+ E A E+L L+P FV+LSN+Y LGRW +++ ++ +K
Sbjct: 615 ASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKD 674
Query: 533 PGCSSIEVNEVVML 546
PGCS IE+N + L
Sbjct: 675 PGCSWIELNNKIHL 688
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 195/450 (43%), Gaps = 74/450 (16%)
Query: 46 QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPI 105
++ ++ AR +FD++ ++ V SWN M +GY+ + + L + M + N +F
Sbjct: 53 KMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSA 112
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
VL +C + + G+++H L+LK+G+ VG+AL+
Sbjct: 113 VLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFC-------------------- 152
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ C I A +FE + + +LW+ +++GY+ M +A +F++MP
Sbjct: 153 -----------VHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPV 201
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+DV++W T++SGYA D C+R LD F M
Sbjct: 202 RDVVAWTTLISGYAKRED--GCER----------------------------ALDLFGCM 231
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
V PN+ T+ V+ CARLG L K VH G + +G A+ + Y C
Sbjct: 232 RRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEA 291
Query: 346 IENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILC 404
I++A V+ SM + L N++I GL GR A +F+E++ + + G
Sbjct: 292 IDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAM 351
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
+ G E+ F+ M+ + + M+ + ++ G L EAV + E +
Sbjct: 352 S----GQFEKSKRLFEKMSPE-----NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNY 402
Query: 465 VIWANLLGSCRV---YKNVELAELALERLT 491
V W +++ + YK +A+ RL+
Sbjct: 403 VSWNSMMSGYIINGKYKEALNLYVAMRRLS 432
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 153/394 (38%), Gaps = 84/394 (21%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
+VI N ++ + + EAR LFDQMP + V SWNTM+SGY+ G E L M
Sbjct: 40 NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMH 99
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
V N+ + VLSACAR G+ K
Sbjct: 100 RSC--------------------------------VALNEVSFSAVLSACARSGSFLLGK 127
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAK-CGIIENAV------------------------ 350
VH +GY+ VG+AL+ CGI E V
Sbjct: 128 QVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQD 187
Query: 351 ------DVFNSMDTKDLITWNTIISGLAMHGRGA-GALSLFHEMKNAGE-MPDGITFIGI 402
D+F M +D++ W T+ISG A G AL LF M+ + E +P+ T +
Sbjct: 188 MMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCV 247
Query: 403 LCACTHMGL-----VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
+ C +G+ V GL + D SI + + C + + A R+ E+
Sbjct: 248 VRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYES------ 301
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
M +A + +L+G +E AEL EL NP ++ ++ Y G+++
Sbjct: 302 MGGQASLNVANSLIGGLVSKGRIEEAELV---FYELRETNPVSYNLMIKGYAMSGQFEKS 358
Query: 518 ARIKVAMRDTGFKKLPGCSSI-----EVNEVVML 546
R+ M L S+ E++E V L
Sbjct: 359 KRLFEKMSPENLTSLNTMISVYSKNGELDEAVKL 392
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H I+T + + Y+ ++ ++ + A++ F I NV +W A+ NGYA
Sbjct: 460 HAHLIKTP-----FQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYA 514
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANI 135
+ ++LF M +PN TF VL +C + EG + H + G I
Sbjct: 515 YHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTI 574
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLFE 190
T +++L ++ A + +M E + ++W +++N D+ +A LF
Sbjct: 575 EHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERAAEKLFS 634
Query: 191 LAP 193
L P
Sbjct: 635 LDP 637
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
GNV N I K G +E A +F+ M + + +WNT+ISG ++ GR AL+L M
Sbjct: 39 GNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFM 98
Query: 388 KNAGEMPDGITFIGILCACTHMG 410
+ + ++F +L AC G
Sbjct: 99 HRSCVALNEVSFSAVLSACARSG 121
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 298/517 (57%), Gaps = 34/517 (6%)
Query: 26 VTSGLEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
+ G+ + D I+ ++ + ++ +AR++F+++ ++NVV+W AM +G+ + +
Sbjct: 260 IFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVG 319
Query: 85 VVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIE 143
LF +M+K + N T ++ ++C + +EG ++H LV + GF ++F+G A+I
Sbjct: 320 FGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIII 379
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
+Y +V AR +F++ +DV+ WN +
Sbjct: 380 MYC-------------------------------RFSFVVEARKIFDMMNRKDVVSWNAL 408
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
++GY+ + E LF++ +KDVISW TM++G++N G + + LF MP+++ +W
Sbjct: 409 IAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWT 468
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G+ NG + E + F ML + V PN T+ +VLSA A L L+ +H
Sbjct: 469 AVISGFVGNGEYEEAIYWFIEMLRK-VVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVK 527
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
G + ++ + N+L+ MY KCG + + +F S+++ +++++N++I+G A +G G AL L
Sbjct: 528 MGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALEL 587
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
FH+M N G+ P+ ITF+G+L ACTH+GL+E+G +YF+SM Y I P HY C+VDLL
Sbjct: 588 FHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLG 647
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG L +A+D ++ MP E + +W LLG+ R++ +++A+LA +++ +LEP N A + +
Sbjct: 648 RAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAV 707
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
LS +Y GR +D ++++A G KK G S I V
Sbjct: 708 LSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 744
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 43/384 (11%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
IT + + A +F ++ +N +SW AM Y +N +F +M +
Sbjct: 117 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA--- 173
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
++ ++ + + N + GE A K+F E
Sbjct: 174 -SYNAMITAYTRSNPMMIGE---------------------------------ASKLFAE 199
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPE--RDVILWNTIVSGYIDVRNMIEARK 218
M ERN + + +MI G G + +A L+ P RD + N ++SGY+ V + EA +
Sbjct: 200 MRERNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATR 259
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+F+ M ++DVISW++M+ GY G + + LFE MPERNV +W +I G+ G +
Sbjct: 260 IFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVG 319
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
F RM EG V N T+ + AC+ G +H G++ +V +GNA+I
Sbjct: 320 FGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIII 379
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY + + A +F+ M+ KD+++WN +I+G + LF + + D I+
Sbjct: 380 MYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQK----DVIS 435
Query: 399 FIGILCACTHMGLVEEGLSYFQSM 422
+ ++ ++ G + + + F+ M
Sbjct: 436 WTTMITGFSNKGKMGKSIELFRMM 459
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/666 (22%), Positives = 249/666 (37%), Gaps = 151/666 (22%)
Query: 14 TTKHLHQIQTQVVTSG----LEKSDYITPRI-----------ITACAQLKQMTYARKMFD 58
TTK L +Q+ G L++++ I R+ +TA + + ARKMF+
Sbjct: 106 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 165
Query: 59 KITDQNVVSWNAMFNGYAQNE--FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
K+ + S+NAM Y ++ LF +M++ N ++ ++ + +
Sbjct: 166 KMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRE----RNSISYAAMITGLARAGMV 221
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
EEL+ L +R + ALI Y +E A ++F M ER+V+ W+SM++GY
Sbjct: 222 DNAEELY-LETPVEWRDPV-CSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGY 279
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK---------- 226
G I AR LFE PER+V+ W ++ G++ + LF +M K+
Sbjct: 280 CKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTL 339
Query: 227 ------------------------------DVISWNTMLSGYANNGDVEECKRLFEEMPE 256
DV N ++ Y V E +++F+ M
Sbjct: 340 TVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNR 399
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
++V SWN LI GY N + EG V F K
Sbjct: 400 KDVVSWNALIAGYVQND-----------EVEEGYVL--------------------FEK- 427
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
Q +V +I ++ G + ++++F M +D I W +ISG +G
Sbjct: 428 --------TQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGE 479
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF-----QSMAMDYSI--- 428
A+ F EM P+ +T +L A + + +GL M D SI
Sbjct: 480 YEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNS 539
Query: 429 ----------------------VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
P I + M+ A+ G EA++ +M E
Sbjct: 540 LVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPN 599
Query: 467 WANLLGSCRVYKNVELAEL------ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
LG +V L E +++ L ++EP P ++ + ++ G G D +
Sbjct: 600 EITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEP-GPHHYACIVDLLGRAGFLDDAIDL 658
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMI-KLLPQNNHPLTFI 579
+ +P C +LG SR R + + A I KL P N P +
Sbjct: 659 --------IRSMP-CEPHSGVWGALLGA-SRIHLRLDVAKLAAQQIFKLEPDNAAPYAVL 708
Query: 580 VVIFST 585
++S+
Sbjct: 709 SFLYSS 714
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S L T QI T VV G+E I +++ + + ++F I N+VS+
Sbjct: 509 SAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSF 568
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG 119
N+M G+AQN F + LF +M PN TF VL +C + L +G
Sbjct: 569 NSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQG 619
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 295/532 (55%), Gaps = 11/532 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V+ +G + +++ ++ A+ T+AR++FD++ ++N+VSW+AM +GY Q
Sbjct: 25 LHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGE 84
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + L++QM +PN + F V+ +C ++A+ G+++H LK G+ + FV +
Sbjct: 85 PQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNS 141
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI +Y A VF E N V + ++I G++ + F+L ++ +I
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPD 201
Query: 201 NTIVSGYIDV----RNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFE 252
G + + N+ +L Q K ++ S N +++ Y+ ++E ++ F
Sbjct: 202 RFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR 261
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ E++V SWN LI ++ + L FK M E V P+D T + L+ACA L ++
Sbjct: 262 LIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMS 321
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H + ++ VGNAL++MYAKCG I A D+F+ M +L++WNTII+G
Sbjct: 322 HGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFG 381
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G A+ LF +M +G PD +TFIG+L AC H GLV++G YF SM Y I P I
Sbjct: 382 NHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDI 441
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EH+ C++D+L RAGRL EA +++++ P D V+ +LL + R++ +V + E + L +
Sbjct: 442 EHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLK 501
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+P + +V+LSN+Y G W VA + ++ +G KK PG S IEVN V
Sbjct: 502 LQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSV 553
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 181/400 (45%), Gaps = 16/400 (4%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T +L C K ALR G LH VLK G ++++F+ ++ +Y+ A +VF EM
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE---LAPERDVILWNTIVSGYIDVRNMIEARK 218
E+N+V W++MI+GY G+ A L+ L P V + +++S + + +K
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYV--FASVISACASLSAVTLGQK 122
Query: 219 LFDQMPK--KDVISW--NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+ + K + IS+ N+++S Y + +F PE N S+N LI G+ N
Sbjct: 123 IHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQ 182
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
L+ FK M +G + P+ + VL C L +H +GN
Sbjct: 183 LERGLEFFKLMRQQG-LIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM- 393
+I MY++ +I+ A F ++ KD+I+WNT+I+ + A L +F M +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD TF L AC + + G + M + + +V++ A+ G + A D
Sbjct: 302 PDDFTFTSALAACAGLASMSHG-KQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+M + + V W ++ + N L E A+E ++
Sbjct: 361 IFSKM-VHHNLVSWNTIIAG---FGNHGLGERAVELFEQM 396
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 172/368 (46%), Gaps = 12/368 (3%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
+I ++ + G E +++ +I+ + Q + A +F + N VS+NA+ G+ +N
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + F M++ +P+ F F VL C L+ G ELHC +K + F+G
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER--- 195
+I +YS I+ A K F ++E++V+ W ++I C D +F+ E
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300
Query: 196 --DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + + ++ + +M +++ + + +D+ N +++ YA G +
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M N+ SWN +I G+ N+GL ++ F++M G + P+ T + +L+AC G
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASG-IRPDSVTFIGLLTACNHAG 419
Query: 310 ALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTI 367
+D + + + E G ++ + LIDM + G + A + D + ++
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSL 479
Query: 368 ISGLAMHG 375
+S +HG
Sbjct: 480 LSASRLHG 487
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
E K ++ Q V L+ + +I IIT ++L + A K F I +++V+SWN +
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLI 275
Query: 73 NGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+ + H + +F M ++ + P+ FTF L +C + ++ G+++H +++
Sbjct: 276 AACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRL 335
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
++ VG AL+ +Y+ I AY +F +M N+V W ++I G+ + G A LFE
Sbjct: 336 YQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFE 394
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H QI ++ + L + + ++ A+ + YA +F K+ N+VSWN +
Sbjct: 317 LASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTI 376
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
G+ + V LF QM P+ TF +L +C + +G+
Sbjct: 377 IAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 275/489 (56%), Gaps = 12/489 (2%)
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
S+N +A RT + LF +M + P+ +T P +L + + H L+
Sbjct: 84 SYNVTLRFFASTR-PRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALL 142
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+ G +A+ +L+ +YS AA +VF + R+VV W +M+ Y G
Sbjct: 143 CRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVA 202
Query: 187 CLFELAPERDVILWNTIVSGYI-----DVRNMIEARKLFDQMPKKDV----ISWNTMLSG 237
+F + + N + + D +++ R L + + ++ + + ++
Sbjct: 203 RMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGM 262
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G++ E +R+F+ + ++V +WN +I GYA NG+ E + F M EG P+ T
Sbjct: 263 YEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEG-ASPDKIT 321
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+V VLSACA +GAL+ + YA + G GNV VG AL+DMY+KCG ++ AV VF +
Sbjct: 322 LVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLP 381
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNA-GEMPDGITFIGILCACTHMGLVEEGL 416
K+ TWN +I GLA +GRG A+ F M+N G PD ITFIG+L AC H GL+++G
Sbjct: 382 CKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGR 441
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+F S+ ++ I+P+IEHY CMVDLLARAG L EA DFV+++P +ADAV+ LL +CR
Sbjct: 442 RWFNSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRK 501
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
KNVE++E + R+ +LEP N N+V+ S IY R D A+++ MR+ G K+PGCS
Sbjct: 502 CKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCS 561
Query: 537 SIEVNEVVM 545
+EV+ V+
Sbjct: 562 WVEVSGKVL 570
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 150/341 (43%), Gaps = 10/341 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
GL+ D+ ++T + L AR++FD I ++VVSWNAM Y + V +F
Sbjct: 146 GLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMF 205
Query: 89 TQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
M A+ PN T +VL +C L G L V VG+AL+ +Y
Sbjct: 206 RDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEK 265
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY 207
+ A +VF + ++VV W +MI GY G A LF + + G
Sbjct: 266 CGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGV 325
Query: 208 IDVRNMIEARKLFDQMPK--------KDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
+ + A +L ++ +V ++ Y+ GD+++ ++F ++P +N
Sbjct: 326 LSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNE 385
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVH 318
+WN LI G A NG E + F+ M E + P+D T + VLSAC G L D +W +
Sbjct: 386 ATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFN 445
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+ + ++D+ A+ G +E A D + K
Sbjct: 446 SLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGK 486
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
++ V ++ +E + ++ + +MT AR++FD I ++VV+WNAM GYAQN
Sbjct: 240 LEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGM 299
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + LF M++ A P+ T VL +C + AL G EL G N++VGTA
Sbjct: 300 SKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTA 359
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-------LAP 193
L+++YS ++ A +VFG++ +N W ++I G G A FE L P
Sbjct: 360 LVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRP 419
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECK 248
D I + ++S + + + R+ F+ + + + ++ M+ A G +EE
Sbjct: 420 --DDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAW 477
Query: 249 RLFEEMP 255
E++P
Sbjct: 478 DFVEKIP 484
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/585 (32%), Positives = 296/585 (50%), Gaps = 77/585 (13%)
Query: 32 KSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM 91
K+ + I++ A+ ++ A ++FD I ++ VSW + GY Q + +F M
Sbjct: 39 KTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDM 98
Query: 92 KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
K +P FT VL SC + G+++H V+K G A + V +L+ +Y+ +
Sbjct: 99 VKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDL 158
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCG---------------DIVSARCLF------- 189
+ A VF M RN W +MI+ +++CG DIVS +
Sbjct: 159 KMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHG 218
Query: 190 ----------------ELAPER-------------DVILWNTIVSGYIDVRNMIEA---- 216
L P+R + + + + GYI VR M +A
Sbjct: 219 FDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYI-VRTMFDASGAV 277
Query: 217 -----------------RKLFDQ--MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
R++ +Q + DVI++ +L+GY GD+ +++F + +
Sbjct: 278 GNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDP 337
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+V +W +I GY NGL + ++ FK M++EG PN T+ +LSA + + +L+ K +
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPR-PNSFTLAAMLSASSSVTSLNHGKQI 396
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGR 376
H A +G + VGNAL MYAK G I A VFN + +D ++W ++I LA HG
Sbjct: 397 HASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGL 456
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
G A+ LF +M G PD IT++G+L ACTH GLVE+G SYF M + I P + HY
Sbjct: 457 GEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYA 516
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CMVDL RAG L EA FV+ MP+E D + W +LL SC+VYKNV+LA++A ERL +EP
Sbjct: 517 CMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPN 576
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
N + L+N+Y G+W D A+I+ M+ G KK G S +++
Sbjct: 577 NSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQ 621
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 192/445 (43%), Gaps = 52/445 (11%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N + N YA+ FH LF +M + F++ +L K L + ++ L+
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEM----PVKTTFSWNTILSGYAKQGKLEKAHQVFDLI-- 67
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV-VWTSMINGYISCGDIVS--- 184
R ++ T ++ G+ E A K+F +M + V+ ++ N SC S
Sbjct: 68 -PVRDSVSWTTIIVGYNQMGR-FEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGI 125
Query: 185 ----ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
+ +L V + N++++ Y ++ A+ +FD+M ++ SWN M+S + N
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G V+ FE + ER++ SWN +I G +G E L F +L + + P+ ++ +
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCG-------IIEN----- 348
LSACA L L F K +H Y + + VGNALI MYAK G IIE
Sbjct: 246 ALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISD 305
Query: 349 ---------------------AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
A +FNS+ D++ W +I G +G A+ +F M
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
+ G P+ T +L A + + + G + ++ ++ P + + + + A+AG
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAG 423
Query: 447 RLAEAVDFVKRMPIEADAVIWANLL 471
+ A + D V W +++
Sbjct: 424 SINGARKVFNLLRQNRDTVSWTSMI 448
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 185/426 (43%), Gaps = 77/426 (18%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN------ 73
++ + VV GL + ++ A+ + A+ +FD++ +N SWNAM +
Sbjct: 128 KVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCG 187
Query: 74 -------------------------GYAQNEFHRTVVVLFTQ-MKKLDAMPNCFTFPIVL 107
G Q+ F + F+ +K P+ F+ L
Sbjct: 188 RVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASAL 247
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE--MDERN 165
+C + L G+++H +++ F A+ VG ALI +Y+ +E A ++ + + + +
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLD 307
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-- 223
V+ +T+++NGY+ GDI AR +F + DV+ W ++ GY+ +A ++F M
Sbjct: 308 VIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVS 367
Query: 224 --PKKDVISWNTMLSG-----------------------------------YANNGDVEE 246
P+ + + MLS YA G +
Sbjct: 368 EGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSING 427
Query: 247 CKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+++F + + R+ SW +I A +GL E ++ F++MLT G + P+ T V VLSAC
Sbjct: 428 ARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG-IKPDHITYVGVLSAC 486
Query: 306 ARLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLIT 363
G ++ + + + + + ++D++ + G+++ A +M + D+I
Sbjct: 487 THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546
Query: 364 WNTIIS 369
W +++S
Sbjct: 547 WGSLLS 552
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G +V + N L+++YAK G +A D+FN M K +WNTI+SG A G+ L
Sbjct: 5 GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGK----LEKA 60
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
H++ + + D +++ I+ MG E+ + F M D + Q + A
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 445 AGR-LAEAV-DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
R + + V FV ++ + A + +LL ++++A++ +R ++ +N +++
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDR---MKLRNTSSWN 177
Query: 503 MLSNIYGDLGR 513
+ +++ + GR
Sbjct: 178 AMISLHMNCGR 188
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 286/529 (54%), Gaps = 9/529 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+ QV+ G I +++ + M AR++FD + ++V ++N M GYA++
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF +M++ PN +F +L C AL G+ +H + G ++ V T
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
ALI +Y +IE A +VF +M R+VV WT MI GY +I A LF E
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQP 362
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
D I + I++ ++ AR++ Q+ + D++ ++ YA G +++ +++F
Sbjct: 363 DRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVF 422
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ M R+V SW+ +IG Y NG E + F ++ V P+ T + +L+AC LGAL
Sbjct: 423 DAMSRRDVVSWSAMIGAYVENGCGEEAFETF-HLMKRNNVEPDVVTYINLLNACGHLGAL 481
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D ++ A ++ VGNALI+M K G IE A +F +M +D++TWN +I G
Sbjct: 482 DLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGY 541
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
++HG AL LF M P+ +TF+G+L AC+ G VEEG +F + IVP
Sbjct: 542 SLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPT 601
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+E YGCMVDLL RAG L EA + RMP++ ++ IW+ LL +CR+Y N+++AE A ER
Sbjct: 602 MELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCL 661
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
EP + A +V LS++Y G W++VA+++ M G +K GC+ IEV
Sbjct: 662 MSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEV 710
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 241/523 (46%), Gaps = 74/523 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q++ ++ SG + + Y +I + M AR+ FD + ++ VV+WNA+ GYAQ
Sbjct: 82 QVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLG 141
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF QM P+ TF IVL +C L+ G+E H V+K GF ++ +GT
Sbjct: 142 HVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGT 201
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
AL+ +Y G +++ A +VF + +R+V + MI GY GD A LF P
Sbjct: 202 ALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKP 261
Query: 194 ER---------------------------------DVILWNTIVSGYIDVRNMIEARKLF 220
R DV + ++ Y+ ++ AR++F
Sbjct: 262 NRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVF 321
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D+M +DV+SW M+ GYA N ++E+ LF M E
Sbjct: 322 DKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE------------------------ 357
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
EG + P+ T + +++ACA L ++ +H G+ ++ V AL+ MY
Sbjct: 358 -------EG-IQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMY 409
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
AKCG I++A VF++M +D+++W+ +I +G G A FH MK PD +T+I
Sbjct: 410 AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
+L AC H+G ++ G+ + + A+ +V I ++++ + G + A + M +
Sbjct: 470 NLLNACGHLGALDLGMEIY-TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM-V 527
Query: 461 EADAVIWANLLGSCRVYKNVELAELALER-LTELEPKNPANFV 502
+ D V W ++G ++ N A +R L E N FV
Sbjct: 528 QRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFV 570
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 197/433 (45%), Gaps = 38/433 (8%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ + + C+ + G+++ ++++G + NI+ LI+L+S + A + F +
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEAR 217
+ + VV W ++I GY G + A LF + A E +I + ++ + +
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182
Query: 218 KLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
+ Q+ K +S ++S Y G ++ +++F+ + +R+V ++N +IGGYA +G
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
+ F RM EG PN + +++L C+ AL + K VH G +V V
Sbjct: 243 DGEKAFQLFYRMQQEG-FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVA 301
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
ALI MY CG IE A VF+ M +D+++W +I G A + A LF M+ G
Sbjct: 302 TALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQ 361
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL---------AR 444
PD IT+I I+ AC +++ I Q+ G DLL A+
Sbjct: 362 PDRITYIHIINACASSA----------DLSLAREIHSQVVRAGFGTDLLVDTALVHMYAK 411
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE-----RLTELEPKNPA 499
G + +A M D V W+ ++G+ Y E A E + +EP +
Sbjct: 412 CGAIKDARQVFDAMS-RRDVVSWSAMIGA---YVENGCGEEAFETFHLMKRNNVEP-DVV 466
Query: 500 NFVMLSNIYGDLG 512
++ L N G LG
Sbjct: 467 TYINLLNACGHLG 479
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
L EG + T V + C L K V + +G Q N+ N LI +++ CG
Sbjct: 52 LGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGN 111
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
+ A F+S++ K ++TWN II+G A G A +LF +M + P ITF+ +L A
Sbjct: 112 MLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDA 171
Query: 406 CT 407
C+
Sbjct: 172 CS 173
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 292/542 (53%), Gaps = 47/542 (8%)
Query: 42 TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM----KKLDAM 97
+A A + +A +FD+I + +N + G A R V L+T+M
Sbjct: 20 SAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVR 79
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ TFP VL++C + A G ++H V+K G ++ FV ALI +++
Sbjct: 80 PDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHA----------- 128
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
SCG++ A LF+ D + W+ +++G ++ AR
Sbjct: 129 --------------------SCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAAR 168
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
LFD+ P KD++SWN M++ YA GD+ + LF+++PER+V SWN +I GY G
Sbjct: 169 DLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH 228
Query: 278 VLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE----YNGYQGNVCVG 333
L+ F++M G P+ T++++LSACA G LD + +H NG+ V +G
Sbjct: 229 ALELFEQMQRMGEK-PDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFP--VVLG 285
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
NALIDMYAKCG +++A +VF SM KD+ TWN+I+ GLA+HG ++ +F +M
Sbjct: 286 NALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVR 345
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
PD ITF+ +L AC+H G+V++G +F M Y + P I+HYGC+VD+L RAG L EA +
Sbjct: 346 PDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFE 405
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
F+ M E ++VIW LL +CRV+ +ELA+ A +L + ++V+LSNIY +G
Sbjct: 406 FIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGE 465
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNN 573
W +++ M D+G K S ++ ++ G L ++++ I + + IK N
Sbjct: 466 WFGSEKMRKLMDDSGVNK--EADSERLHHRLLFGFLVKQIN---ISPSCISYIKEYNVNP 520
Query: 574 HP 575
HP
Sbjct: 521 HP 522
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 60/372 (16%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV +G E ++ +I A + A +FD ++ V+W+AM G A+
Sbjct: 103 QVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRG 162
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF D P +K V N
Sbjct: 163 DIGAARDLF------DECP--------VKDLVSWN------------------------- 183
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPER 195
+I Y+ + A ++F ++ ER+VV W MI+GY+ CG + A LFE + +
Sbjct: 184 VMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKP 243
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK------DVISWNTMLSGYANNGDVEECKR 249
D++ +++S D ++ ++L + V+ N ++ YA G ++
Sbjct: 244 DIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHE 303
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M +++V +WN ++GG A +G E +D F++ML +G+V P++ T V VL AC+ G
Sbjct: 304 VFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKML-KGKVRPDEITFVAVLIACSHGG 362
Query: 310 ALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLIT 363
+D F+ H Y + N+ ++DM + G+++ A + ++M + + +
Sbjct: 363 MVDKGREFFNLMQHKYR----VEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 364 WNTIISGLAMHG 375
W T++S +HG
Sbjct: 419 WRTLLSACRVHG 430
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 42/285 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ M AR++FD++ +++VVSWN M +GY + H + LF QM+++ P+
Sbjct: 185 MITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPD 244
Query: 100 CFTFPIVLKSCVKINALREGEELHC----LVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
T +L +C L G+ LH + +NGF + +G ALI++Y+ ++++A+
Sbjct: 245 IVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGF--PVVLGNALIDMYAKCGSMKSAH 302
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
+VF M +++V W S++ G G ++ + +FE
Sbjct: 303 EVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFE------------------------- 337
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYA 270
K+ + D I++ +L ++ G V++ + F M E N+ + ++
Sbjct: 338 --KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLG 395
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
GL E + M E PN T+LSAC G ++ +K
Sbjct: 396 RAGLLKEAFEFIDTMKCE----PNSVIWRTLLSACRVHGEIELAK 436
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/417 (39%), Positives = 235/417 (56%), Gaps = 12/417 (2%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
I+ A +VF M ++V W +M++G G A +F + P R+ + WN +V+
Sbjct: 93 IDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACS 152
Query: 211 RNMIEARKLFDQMPKK-DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+M A LF P+K D I W M+SGY + G+V++ F MP RN+ SWN ++ GY
Sbjct: 153 GDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGY 212
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
N + L FK M+ + V PN +T+ +VL C+ L AL F + VH + N
Sbjct: 213 VKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRN 272
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V VG +L+ MY KCG + +A VF+ M TKD++ WN +ISG A HG G A+ LF +MK+
Sbjct: 273 VTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKD 332
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G +PD IT + +L AC H GL + G+ F++M Y I PQI+HY CMVDLL RAG L
Sbjct: 333 EGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLE 392
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
AV+ + MP E + LL +CRVYKN+E AE A +L E +P+N +V L+NIY
Sbjct: 393 RAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYA 452
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV-----------VMLGCLSRELDR 555
+W DV+R++ M+D K PG S +E+ V LG + +LDR
Sbjct: 453 VANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDR 509
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 176/435 (40%), Gaps = 59/435 (13%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIV---SARCLFELAPERDVILWNTIVSGY 207
+ A + F + + ++ GY ++ AR LF+ P D + +NT++S +
Sbjct: 28 LAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCH 87
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ AR++F MP KDV SWNTM+SG + NG EE +F MP RN SWN ++
Sbjct: 88 FACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVA 147
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
A +G D F+ + DA + T
Sbjct: 148 ALACSGDMGAAEDLFRNAPEK-----TDAILWT--------------------------- 175
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
A++ Y G ++ A++ F +M ++L++WN +++G + R AL +F M
Sbjct: 176 -------AMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTM 228
Query: 388 -KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
+++ P+ T +L C+++ + G Q M + + ++ + + G
Sbjct: 229 VEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQ-WCMKLPLSRNVTVGTSLLSMYCKCG 287
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
L +A M + D V W ++ + A E++ + E P +L+
Sbjct: 288 DLNDACKVFDEMSTK-DIVAWNAMISGYAQHGGGMQAIKLFEKMKD-EGVVPDWITLLAV 345
Query: 507 IYGDLGRWKDVARIKVAMRDTG---FKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEA 563
+ A I + D G F+ + IE ++ C+ L R ++
Sbjct: 346 L---------TACIHTGLCDFGIQCFETMQEAYKIE-PQIDHYSCMVDLLCRAGLLERAV 395
Query: 564 NMIKLLPQNNHPLTF 578
NMI +P HP +
Sbjct: 396 NMIHSMPFEPHPSAY 410
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 147/346 (42%), Gaps = 82/346 (23%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++F + ++V SWN M +G ++N +F M
Sbjct: 96 ARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP-------------------- 135
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTS 171
++N N A++ + + AA +F E+ + ++WT+
Sbjct: 136 --------------VRNAVSWN-----AMVAALACSGDMGAAEDLFRNAPEKTDAILWTA 176
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
M++GY+ G++ A F P R+++ WN +V+GY+ +A ++F M + ++
Sbjct: 177 MVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQP 236
Query: 232 N----------------------------------------TMLSGYANNGDVEECKRLF 251
N ++LS Y GD+ + ++F
Sbjct: 237 NASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVF 296
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+EM +++ +WN +I GYA +G + + F++M EG V P+ T++ VL+AC G
Sbjct: 297 DEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEG-VVPDWITLLAVLTACIHTGLC 355
Query: 312 DFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
DF + E + + + ++D+ + G++E AV++ +SM
Sbjct: 356 DFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSM 401
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 31 EKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF- 88
EK+D I +++ + A + F + +N+VSWNA+ GY +N + +F
Sbjct: 167 EKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFK 226
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
T ++ PN T VL C ++AL G ++H +K N+ VGT+L+ +Y
Sbjct: 227 TMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKC 286
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL-WNTIVS 205
+ A KVF EM +++V W +MI+GY G + A LFE + V+ W T+++
Sbjct: 287 GDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLA 344
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
GD+ + F + ++N L+ GYA + DA R L + P+ + T+
Sbjct: 26 GDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADA--RRLFDSIPHPDTVSYNTL 83
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LS G +D ++ V +V N ++ +K G E A +F M ++
Sbjct: 84 LSCHFACGDIDGARRVFSTMPVK----DVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNA 139
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
++WN +++ LA G A LF +NA E D I + ++ G V++ + +F +
Sbjct: 140 VSWNAMVAALACSGDMGAAEDLF---RNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGA 196
Query: 422 M 422
M
Sbjct: 197 M 197
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/583 (34%), Positives = 305/583 (52%), Gaps = 76/583 (13%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
I++ A+ ++ A ++F+++ + + VSW AM GY Q + +F +M D P
Sbjct: 85 ILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPT 144
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS-TGKAIEA----- 153
FT VL SC + L G ++H V+K+G + I V +L+ +Y+ +G + A
Sbjct: 145 QFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFD 204
Query: 154 -------------------------AYKVFGEMDERNVVVWTSMINGYISCG------DI 182
A F +M ER+VV W +MI+GY G DI
Sbjct: 205 RMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264
Query: 183 VSARCL--------FELAP------------------------ERDVI--LWNTIVSGYI 208
S + F LA E D + N ++S Y
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324
Query: 209 DVRNMIEARKLFDQ--MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
+ A+K+ +Q + DVI++ +L GY GD+ +R+F+ + R+V +W +I
Sbjct: 325 KSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMI 384
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY NG + ++ F+ M+ EG PN+ T+ T+LS + L +LD + +H A +G
Sbjct: 385 VGYVQNGFNQDAMELFRSMIKEGPK-PNNYTLATMLSVSSSLASLDHGRQIHASATRSGN 443
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGALSLFH 385
+V V NALI MYAK G I +A VFN + K D ITW ++I LA HG G AL+LF
Sbjct: 444 ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFE 503
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M G PD IT++G+L ACTH+GLVE+G SY+ M + I+P HY CM+DL RA
Sbjct: 504 RMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRA 563
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G L EA F++ MPIE D + W +LL SC+V+KNVELAE+A ERL +EP+N + L+
Sbjct: 564 GLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALA 623
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEVVMLG 547
N+Y G+W++ A I+ +M+D G KK G S +++ N+V + G
Sbjct: 624 NVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFG 666
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 183/431 (42%), Gaps = 73/431 (16%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---- 189
++F ++ Y+ G +E A++VF EM E + V WT+MI GY G +A +F
Sbjct: 78 SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMV 137
Query: 190 -ELAPERDVILWNTI-----------------------VSGYIDVRNM-----------I 214
+ P L N + +S YI V N +
Sbjct: 138 SDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A+ +FD+M K SWNTM+S + +G V+ + FE+M ER+V SWN +I GY +G
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGF 257
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E LD F +ML + P+ T+ + LSACA L L K +H + + VGN
Sbjct: 258 DREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN 317
Query: 335 ALIDMYAKCG-------IIENAV--------------------------DVFNSMDTKDL 361
ALI MY+K G IIE ++ +F+S+ +D+
Sbjct: 318 ALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDV 377
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ W +I G +G A+ LF M G P+ T +L + + ++ G S
Sbjct: 378 VAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHAS 437
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
A + ++ + A++G + +A + + D + W +++ + + E
Sbjct: 438 -ATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGE 496
Query: 482 LAELALERLTE 492
A ER+ E
Sbjct: 497 EALTLFERMLE 507
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 119/234 (50%), Gaps = 5/234 (2%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
V L N +++ Y + +A ++FD+MP K V SWN +LSGYA G +EE R+FEEMPE
Sbjct: 48 VFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPE 107
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
+ SW +I GY G F + F+ M+++ V P T+ VL++CA + L +
Sbjct: 108 PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDD-VPPTQFTLTNVLASCAAVECLGIGRK 166
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH + +G + V N+L++MYAK G A VF+ M K +WNT+IS G
Sbjct: 167 VHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGL 226
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A F +M D +++ ++ G E L F M MD S P
Sbjct: 227 VDLAQVQFEQMIER----DVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKP 276
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 190/436 (43%), Gaps = 87/436 (19%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF------- 72
++ + VV GL + ++ A+ A+ +FD++ ++ SWN M
Sbjct: 166 KVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSG 225
Query: 73 ------------------------NGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVL 107
+GY Q+ F R + +F++M + P+ FT L
Sbjct: 226 LVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASAL 285
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE--MDERN 165
+C + L+ G+++H +++ F VG ALI +YS +E A K+ + + +
Sbjct: 286 SACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLD 345
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-- 223
V+ +T++++GY+ GDI AR +F+ RDV+ W ++ GY+ +A +LF M
Sbjct: 346 VIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIK 405
Query: 224 --PKKD-----------------------------------VISWNTMLSGYANNGDVEE 246
PK + V N +++ YA +G + +
Sbjct: 406 EGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSIND 465
Query: 247 CKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ +F + +R+ +W +I A +GL E L F+RML G + P+ T V VLSAC
Sbjct: 466 ARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENG-IKPDHITYVGVLSAC 524
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCV------GNALIDMYAKCGIIENAVDVFNSMDTK 359
+G ++ + + YN Q + +ID++ + G+++ A +M +
Sbjct: 525 THVGLVEQGR-----SYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIE 579
Query: 360 -DLITWNTIISGLAMH 374
D+I W ++++ +H
Sbjct: 580 PDVIAWGSLLASCKVH 595
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
K +H G V + N L++ YAK G I +A VF+ M K + +WN I+SG A
Sbjct: 33 KSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKG 92
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
GR A +F EM PD +++ ++ MG E + F+ M D
Sbjct: 93 GRLEEAHRVFEEMPE----PDSVSWTAMIVGYNQMGQFENAIGMFREMVSD 139
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 281/527 (53%), Gaps = 9/527 (1%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
V +GL S ++ ++ + ++ R++F ++ +NVVSW A+ G + +++ +
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
V F++M + + +TF I LK+C AL G E+H +K GF + FV L +Y
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWN 201
+ +E +F +M R+VV WT++I + G A F E DV +
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPER 257
++SG ++ + +L + + + N++++ YA G + +F EM R
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR 382
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
++ SW+ +I GY+ G E + M EG P + + +VLSAC + L+ K +
Sbjct: 383 DIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPK-PTEFALASVLSACGNMAILEHGKQL 441
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H Y G + V +ALI+MY KCG IE A +F++ + D+++W +I+G A HG
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ LF ++ G PD +TFIG+L AC+H GLV+ G YF +M+ Y I P EHYGC
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
M+DLL RAGRL++A ++ MP D V+W+ LL +CRV+ +VE ER+ +LEP
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L+NIY G+W++ A I+ M+ G K PG S I+V ++V
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLV 668
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 220/464 (47%), Gaps = 43/464 (9%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCV 111
AR+MFDK++ ++ +SW + +GY ++LF M+ + + F + K+C
Sbjct: 68 ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ + GE LH +K G ++FVG+AL+++Y+ I +VF EM RNVV WT+
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTA 187
Query: 172 MINGYISCG----DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK- 226
+I G + G +V ++ E D + + D + R++ Q KK
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247
Query: 227 -DVISW--NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
DV S+ NT+ + Y G +E LFE+M R+V SW +I G + AF
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
RM E V PN+ T V+S CA L +++ + +H + G ++ V N+++ MYAKC
Sbjct: 308 RM-RESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G + ++ +F+ M +D+++W+TII+G + G + A L M+ G P +L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 404 CACTHMGLVEEGL---SYFQSMAMDYSIV---------------------------PQIE 433
AC +M ++E G +Y S+ ++++ + I
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMP---IEADAVIWANLLGSC 474
+ M++ A G E +D +++P + D+V + +L +C
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC 530
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 218/488 (44%), Gaps = 61/488 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q + G + S ++ + T + ++ Y +F+K++ ++VVSW + Q
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V F +M++ D PN +TF V+ C + + GE+LH L+L G A++ V
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL-------A 192
+++ +Y+ + ++ +F EM R++V W+++I GY G + A FEL
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEA---FELLSWMRMEG 414
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDVEECK 248
P+ +++S ++ + ++L + + + + +++ Y G +EE
Sbjct: 415 PKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
R+F+ ++ SW +I GYA +G EV+D F+++ G + P+ T + VLSAC+
Sbjct: 475 RIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG-LRPDSVTFIGVLSACSHA 533
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKCGIIENAVDVFNSMD-TKDLITWN 365
G +D + + A YQ + + +ID+ + G + +A + +M +D + W+
Sbjct: 534 GLVDLG-FRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV------------- 412
T++ +HG +++ + I + CA TH+ L
Sbjct: 593 TLLRACRVHG----------DVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAA 642
Query: 413 -------------EEGLSYFQSMAMDYSIV------PQIEHYGCMVDLLARAGRLAEAVD 453
E G S+ + + ++ V PQ E M+DLLA LA+ V
Sbjct: 643 DIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQ 702
Query: 454 FVKRMPIE 461
+P +
Sbjct: 703 ETGFLPYD 710
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 158/371 (42%), Gaps = 48/371 (12%)
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV-------- 228
+ G + +AR +F+ ++D I W T++SGY++ + EA LF M +
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 229 ------------ISWNTMLSGYA--------------------NNGDVEECKRLFEEMPE 256
+++ +L GYA NG + E +R+F EMP
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RNV SW +I G G E L F M RV + T L ACA GAL++ +
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMW-RSRVEYDSYTFAIALKACADSGALNYGRE 238
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H A G+ + V N L MY KCG +E + +F M +D+++W TII+ L G+
Sbjct: 239 IHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ 298
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
A+ F M+ + P+ TF ++ C ++ +E G ++ + + +
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWG-EQLHALILHLGLAASLSVEN 357
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT--ELE 494
++ + A+ G+L + M D V W+ ++ Y A E L+ +E
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAG---YSQGGHVSEAFELLSWMRME 413
Query: 495 PKNPANFVMLS 505
P F + S
Sbjct: 414 GPKPTEFALAS 424
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 5/288 (1%)
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+ + D+ N L G + +R+F++M +++ SW LI GY N E L F
Sbjct: 44 ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
K M E + + + AC +++ + +H YA G +V VG+AL+DMY K
Sbjct: 104 KNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK 163
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G I VF+ M +++++W II+GL G AL F EM + D TF
Sbjct: 164 NGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223
Query: 403 LCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L AC G + G + Q+M + + + + + + + G+L + ++M +
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR 281
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
D V W ++ + E A A R+ E + +P + + I G
Sbjct: 282 -DVVSWTTIITTLVQMGQEECAVQAFIRMRESDV-SPNEYTFAAVISG 327
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+H Q+ V++ GLE + + +I + + A ++FD + ++VSW AM NGY
Sbjct: 436 EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGY 495
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR--- 132
A++ + R V+ LF ++ ++ P+ TF VL +C H ++ GFR
Sbjct: 496 AEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACS-----------HAGLVDLGFRYFN 544
Query: 133 ----------ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
+ G + L G+ +A + + R+ VVW++++ GD+
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDV 604
Query: 183 VSAR 186
R
Sbjct: 605 ERGR 608
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 274/504 (54%), Gaps = 13/504 (2%)
Query: 45 AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
A+ + ARK+FD+I +NVVSW +M +G QN F + LF +M++ +P+ +T
Sbjct: 168 AKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMA 227
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
VL +C + +L +G +H V+K+G N F+ A++++Y +E A ++F E+
Sbjct: 228 SVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFV 287
Query: 165 NVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRNMIEARK 218
++V+WT+MI GY G + A LF + P I T++S +RN+ R
Sbjct: 288 DLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTI--ATVLSASAQLRNLSLGRL 345
Query: 219 LFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
+ K VI N ++ YA + E +F + ++V +WN LI GY N +
Sbjct: 346 IHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDM 405
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E L F +M +G P+ +IV LSAC LG L K H YA + NV V
Sbjct: 406 GNEALMLFSQMRVQGSS-PDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNT 464
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
AL+++Y KC + +A VF+ M ++ +TW +I G M G AG++ L ++M P
Sbjct: 465 ALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQP 524
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
+ + F IL C+H G+V G F SMA ++I P ++HY CMVD+LARAG L EA++F
Sbjct: 525 NEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEF 584
Query: 455 VKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRW 514
+++MP+ AD IW L C+++ +E E A+ R+ L P P +V++SN+Y GRW
Sbjct: 585 IQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRW 644
Query: 515 KDVARIKVAMRDTGFKKLPGCSSI 538
I+ M++ G KLPGCSS+
Sbjct: 645 DKSLAIRRLMQERGLVKLPGCSSV 668
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 14/372 (3%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ + V+ G+ + +IT ++ + ++ AR++FD++ ++V W M G
Sbjct: 239 LHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVG 298
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y QN ++LF+ K + +PN T VL + ++ L G +H + +K N
Sbjct: 299 YTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIEN 358
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE---- 190
V AL+++Y+ KA+ A +FG + ++VV W S+I GY+ A LF
Sbjct: 359 DVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRV 418
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS---WNT-MLSGYANNGDVEE 246
D I +S + + +++ + K+ +S NT +L+ Y D+
Sbjct: 419 QGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPS 478
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+R+F EM ERN +W +IGGY G +D +ML + + PN+ ++LS C+
Sbjct: 479 AQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKD-NIQPNEVVFTSILSTCS 537
Query: 307 RLGALDFSKWV-HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITW 364
G + K A+Y ++ ++D+ A+ G +E A++ M D+ W
Sbjct: 538 HTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIW 597
Query: 365 NTIISGLAMHGR 376
+ G +H R
Sbjct: 598 GAFLHGCKLHSR 609
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 172/376 (45%), Gaps = 15/376 (3%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L +C + +LR LH +L +G + T L+ Y+ + +A +V E +
Sbjct: 29 LLPACATLPSLRA---LHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPD 85
Query: 166 VVVWTSMINGYISCGDIVSA----RCLFELAPER--DVILWNTIVSGYIDVRNMIEARKL 219
+ + + + G A R + PE DV+L + + + + R+L
Sbjct: 86 PYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRL 145
Query: 220 FDQMPKK---DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFF 276
K D N ++ YA GD+E +++F+ + RNV SW ++ G NG
Sbjct: 146 HCNAVKAGGADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAE 205
Query: 277 EVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
E L F M E RV P++ T+ +VL AC LG+L +WVH +G N + A+
Sbjct: 206 EGLALFNEMREE-RVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAV 264
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMY KCG +E+A +F+ + DL+ W T+I G +G AL LF + K +P+
Sbjct: 265 LDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNS 324
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
+T +L A + + G +M++ ++ +VD+ A+ L+EA
Sbjct: 325 VTIATVLSASAQLRNLSLG-RLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFG 383
Query: 457 RMPIEADAVIWANLLG 472
R+ D V W +L+
Sbjct: 384 RIS-NKDVVTWNSLIA 398
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 282/516 (54%), Gaps = 22/516 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ +M A +MF + + +VVSWNA+ G+ QN + F +M + DA
Sbjct: 99 MISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDAA-- 156
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT--ALIELYSTGKAIEAAYKV 157
+ ++ ++ L E + ++G R + LI Y ++ A K+
Sbjct: 157 --SLSALVSGLIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKL 214
Query: 158 FGEMD-------------ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIV 204
F ++ RNVV W +MI Y+ G+IV AR LF+ ERD I WNT++
Sbjct: 215 FDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDTISWNTMI 274
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
SGY+++ +M EA +LF +MP D+ SWN M++G+A GD++ LF MP++N+ SWN
Sbjct: 275 SGYVNMLDMDEASRLFCEMPNPDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNS 334
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GY N + + F +M EG P+ T+ +VLS A + L +H
Sbjct: 335 VITGYEKNDDYIGAIKIFIQMQVEGEK-PDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKT 393
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSL 383
+V + NALI MY++CG I A +F+ + K++I+WN +I G A HG AL +
Sbjct: 394 VIP-DVPINNALITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIGGYASHGYAVEALEV 452
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F MK+ P ITFI +L AC H GLVEEG F+SMA ++ I P +EHY +VD+++
Sbjct: 453 FKLMKSFDVRPTHITFISVLHACAHAGLVEEGREIFESMADEFGIEPSVEHYASLVDIMS 512
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
R G+L +A+D + MP E D +W LL + +V+ +E+A +A E L LEP + A +V+
Sbjct: 513 RHGQLEQALDLINSMPFEPDKAVWGALLSAAKVHNKIEVARVAAEALIRLEPDSSAPYVL 572
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
L N+Y D+G+W A +++ M + KK S ++
Sbjct: 573 LYNMYADVGQWDSAAEVRIMMERSNIKKQAAYSWVD 608
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 173/339 (51%), Gaps = 33/339 (9%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID- 209
I+ A +F +M+E N V W ++I Y+ +I AR LF+ P+RD++ WN ++SGY+
Sbjct: 13 IDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIVSWNLMISGYVSC 72
Query: 210 --VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+R + E R LFD+MP++D++SWNTM+SGYA NG ++E R+F+ MPE +V SWN ++
Sbjct: 73 HGIRFLKEGRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVT 132
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G+ NG ++ F+RM + A++ ++S R G LD + V V E +G +
Sbjct: 133 GFLQNGDVARAIEYFERMPER-----DAASLSALVSGLIRNGELDEAARVVVRFERDGGR 187
Query: 328 GN--VCVGNALIDMYAKCGIIENAVDVFNSMD-------------TKDLITWNTIISGLA 372
+ N LI Y + ++ A +F+ + +++++WNT+I
Sbjct: 188 KENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYV 247
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
G A LF +M D I++ ++ +M ++E F M P I
Sbjct: 248 KAGNIVFARELFDQMMER----DTISWNTMISGYVNMLDMDEASRLFCEMPN-----PDI 298
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ M+ A+ G L D RMP + + V W +++
Sbjct: 299 FSWNKMIAGHAQIGDLDRVNDLFGRMP-QKNLVSWNSVI 336
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 141/290 (48%), Gaps = 17/290 (5%)
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI---VSARCLFE 190
N A+I Y + I A K+F EM +R++V W MI+GY+SC I R LF+
Sbjct: 27 NTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIVSWNLMISGYVSCHGIRFLKEGRNLFD 86
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
PERD++ WNT++SGY M EA ++F MP+ DV+SWN +++G+ NGDV
Sbjct: 87 RMPERDIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGDVARAIEY 146
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV-TVLSACARLG 309
FE MPER+ S + L+ G NG E R +G N T+++ R
Sbjct: 147 FERMPERDAASLSALVSGLIRNGELDEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRD 206
Query: 310 ALDFSKWVHVYAEY---------NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+D ++ + + + NV N +I Y K G I A ++F+ M +D
Sbjct: 207 RVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERD 266
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
I+WNT+ISG A LF EM N PD ++ ++ +G
Sbjct: 267 TISWNTMISGYVNMLDMDEASRLFCEMPN----PDIFSWNKMIAGHAQIG 312
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 123/273 (45%), Gaps = 38/273 (13%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
++I AQ+ + +F ++ +N+VSWN++ GY +N+ + + +F QM+ P
Sbjct: 303 KMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQVEGEKP 362
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ T VL I L+ G ++H LV K ++ + ALI +YS AI A +F
Sbjct: 363 DRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVI-PDVPINNALITMYSRCGAIIEAGTIF 421
Query: 159 GEMD-ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
E+ ++ V+ W +MI GY S G V A +F+L
Sbjct: 422 DEVKLQKEVISWNAMIGGYASHGYAVEALEVFKLM------------------------- 456
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVFSWNGLIGGYANN 272
K FD P I++ ++L A+ G VEE + +FE M E +V + L+ + +
Sbjct: 457 KSFDVRPTH--ITFISVLHACAHAGLVEEGREIFESMADEFGIEPSVEHYASLVDIMSRH 514
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
G + LD M E P+ A +LSA
Sbjct: 515 GQLEQALDLINSMPFE----PDKAVWGALLSAA 543
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 58/245 (23%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +S A NG ++E + LF++M E N SWN +I Y +R + + R
Sbjct: 1 NKKISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVK-----------RREIAKARK 49
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC-GI--IEN 348
++ Q ++ N +I Y C GI ++
Sbjct: 50 LFDEMP-----------------------------QRDIVSWNLMISGYVSCHGIRFLKE 80
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
++F+ M +D+++WNT+ISG A +GR AL +F M D +++ I+
Sbjct: 81 GRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMPEG----DVVSWNAIVTGFLQ 136
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIE--HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
G V + YF+ M P+ + +V L R G L EA V R E D
Sbjct: 137 NGDVARAIEYFERM-------PERDAASLSALVSGLIRNGELDEAARVVVR--FERDGGR 187
Query: 467 WANLL 471
NLL
Sbjct: 188 KENLL 192
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 290/573 (50%), Gaps = 75/573 (13%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K +H++ V GL + ++T C + + A++ F I D++VV +NA+
Sbjct: 245 LDEGKRIHKL---TVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
AQ+ + + +M+ N T+ +L +C AL G+ +H + ++G
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+++ +G A +I+ Y CGD+ AR LF
Sbjct: 362 SSDVQIGNA-------------------------------LISMYARCGDLPKARELFYT 390
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANN------ 241
P+RD+I WN I++GY + EA +L+ QM + V +++ +LS AN+
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 242 -----------------------------GDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
G + E + +FE R+V SWN +I G+A +
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G + F+ M E + P++ T +VLS C AL+ K +H +G Q +V +
Sbjct: 511 GSYETAYKLFQEMQNE-ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNL 569
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG- 391
GNALI+MY +CG +++A +VF+S+ +D+++W +I G A G A+ LF +M+N G
Sbjct: 570 GNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
PDG TF IL AC H GLV EG F SM +Y ++P IEHYGC+V LL RA R EA
Sbjct: 630 RPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEA 689
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
+ +MP DA +W LLG+CR++ N+ LAE A +L +NPA +++LSN+Y
Sbjct: 690 ETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAA 749
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW DVA+I+ M G +K PG S IEV+ ++
Sbjct: 750 GRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNII 782
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 245/488 (50%), Gaps = 13/488 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q+V +G+ +++ +I + + + A ++F ++ ++V+SWN++ + YAQ
Sbjct: 48 RIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQG 107
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + LF +M+ +PN T+ +L +C L G+++H ++K G++ + V
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPE---R 195
+L+ +Y + A +VF + R+VV + +M+ Y + LF +++ E
Sbjct: 168 SLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227
Query: 196 DVILWNTIVSGYIDVRNMIEARKLF----DQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
D + + ++ + + E +++ ++ D+ +++ GDV+ K+ F
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ + +R+V +N LI A +G E + + RM ++G V N T +++L+AC+ AL
Sbjct: 288 KGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG-VALNRTTYLSILNACSTSKAL 346
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H + +G+ +V +GNALI MYA+CG + A ++F +M +DLI+WN II+G
Sbjct: 347 EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGY 406
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A A+ L+ +M++ G P +TF+ +L AC + +G + + + I
Sbjct: 407 ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-LRSGIKSN 465
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
++++ R G L EA + + D + W +++ + + E A + +
Sbjct: 466 GHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQ 524
Query: 492 --ELEPKN 497
ELEP N
Sbjct: 525 NEELEPDN 532
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 201/414 (48%), Gaps = 27/414 (6%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
T+ +L++C + L E + +H +++ G +IF+ LI +Y +++ A++VF EM
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIE 215
R+V+ W S+I+ Y G A LFE P + I + +I++ +
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNK--ITYISILTACYSPAELEN 146
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+K+ Q+ K +D N++LS Y GD+ +++F + R+V S+N ++G YA
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
E L F +M +EG + P+ T + +L A LD K +H G ++
Sbjct: 207 KAYVKECLGLFGQMSSEG-ISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
VG AL+ M +CG +++A F + +D++ +N +I+ LA HG A ++ M++ G
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD-YSIVPQIEHYGCMVDLLARAGRLAE 450
+ T++ IL AC+ +E G ++ D +S QI + ++ + AR G L +
Sbjct: 326 VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN--ALISMYARCGDLPK 383
Query: 451 AVDFVKRMPIEADAVIWANLLG----------SCRVYKNVELAELALERLTELE 494
A + MP + D + W ++ + R+YK ++ + R+T L
Sbjct: 384 ARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 8/296 (2%)
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
E D + ++ R + EA+++ QM + D+ N +++ Y V + +
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+EMP R+V SWN LI YA G + F+ M G PN T +++L+AC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG-FIPNKITYISILTACYSPA 142
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ K +H GYQ + V N+L+ MY KCG + A VF + +D++++NT++
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
A L LF +M + G PD +T+I +L A T +++EG + ++ +
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG-KRIHKLTVEEGLN 261
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY-KNVELAE 484
I +V + R G + A K + + D V++ L+ + + NVE E
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQHGHNVEAFE 316
>gi|354805181|gb|AER41600.1| CRR4 [Oryza glaberrima]
Length = 540
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 275/524 (52%), Gaps = 75/524 (14%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY----- 145
M+ P FTF +L++C + R H +++ GF +++FV AL+++Y
Sbjct: 1 MRAQGVPPYGFTFTFLLRACALLGLPRPCGCFHGQIVRCGFGSDVFVQNALMDVYHRCGG 60
Query: 146 --STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
G + AA +VF EM +R+VV W S++ Y+S GD A FE PER+V+ WNT+
Sbjct: 61 GGGGGGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNTV 120
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK--------------- 248
V+G+ + +M+ A +FD+MP ++ +SWN M+SGYA +GDVE +
Sbjct: 121 VAGFARMGDMVTAWAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMDQKDVVSWT 180
Query: 249 ----------------RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR
Sbjct: 181 AMVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFR 240
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P++AT+V+V+SACA+LG++++ W+ + + V +GNALIDM+AKCG + A +
Sbjct: 241 PDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSI 300
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M+T+ +ITW T+ISG A +G AL +++ M G D FI L AC H GL+
Sbjct: 301 FYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAALAACAHGGLL 360
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EG S F M Y+I P++EHYGCMVDLL RA
Sbjct: 361 QEGWSIFNEMVERYNIQPRMEHYGCMVDLLGRA--------------------------- 393
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
EL E +++TELEP N + V++SN GRW V + +MR+ G +K+
Sbjct: 394 --------ELIEYVSKKITELEPFNSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKV 445
Query: 533 PGCSSIEVNEVV--MLGCLSRELDRKSIVRAEANMIKLLPQNNH 574
PG SSI+V V L +R RK I ++ L+
Sbjct: 446 PGSSSIQVGSEVHEFLAKDTRHKRRKEIYETVDGLMALMRHTEQ 489
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 161/390 (41%), Gaps = 97/390 (24%)
Query: 51 TYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
T A F+ + ++NVVSWN + G+A+ T +F D MP+
Sbjct: 100 TGAMGFFEAMPERNVVSWNTVVAGFARMGDMVTAWAVF------DRMPS----------- 142
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+N N+ +I Y+T +EAA VF MD+++VV WT
Sbjct: 143 -----------------RNAVSWNL-----MISGYATSGDVEAARSVFDRMDQKDVVSWT 180
Query: 171 SMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFD--------- 221
+M++ Y GD+ +A LF+ P ++++ WN +++GY EA + F
Sbjct: 181 AMVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFR 240
Query: 222 --------------QMPKKDVISW-----------------NTMLSGYANNGDVEECKRL 250
Q+ + +W N ++ +A GDV + +
Sbjct: 241 PDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGDVGRAQSI 300
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F +M R + +W +I G+A NGL + L + M EG V +D + L+ACA G
Sbjct: 301 FYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREG-VQLDDTVFIAALAACAHGGL 359
Query: 311 LD--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE------NAVDVFNSMDTKDLI 362
L +S + + YN Q + ++D+ + +IE ++ FNS
Sbjct: 360 LQEGWSIFNEMVERYN-IQPRMEHYGCMVDLLGRAELIEYVSKKITELEPFNS------- 411
Query: 363 TWNTIISGL-AMHGRGAGALSLFHEMKNAG 391
++ ++S A+ GR G + M+N G
Sbjct: 412 SYQVLVSNCSALEGRWDGVIDARTSMRNWG 441
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 30 LEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+++ D ++ +++A A++ + A ++FD + +N+VSWNAM GY N + + F
Sbjct: 171 MDQKDVVSWTAMVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTF 230
Query: 89 TQMKKLDAM--PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
Q+ L+ P+ T V+ +C ++ ++ + + K+ + +G ALI++++
Sbjct: 231 -QLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFA 289
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
+ A +F +M+ R ++ WT+MI+G+
Sbjct: 290 KCGDVGRAQSIFYKMETRCIITWTTMISGF 319
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 301/520 (57%), Gaps = 23/520 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A+ + ARK+F+ + ++ VV W M Y Q V LF M + P+
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST---GKAIEAAYK 156
+T ++ +C + + G++LH LVL+ G ++ V L+++Y+ +++E A K
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARK 308
Query: 157 VFGEMDERNVVVWTSMINGYISCG----DIVSARC-LFELAPERDVILWNTIVSGYIDVR 211
VF M NV+ WT++I+GY+ CG + V C + + E + + +++++ ++
Sbjct: 309 VFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLS 368
Query: 212 NMIEARKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ R++ ++ K + + N ++S YA +G +EE ++ F+++ ERN+ S + IG
Sbjct: 369 DQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG 428
Query: 268 --GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
G +N ++ + V + T ++LSA A +G + +H + G
Sbjct: 429 ETGRSNA--------SWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTG 480
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLF 384
++ + + N+L+ MY++CG +++A F+ M D ++I+W +IIS LA HG ALSLF
Sbjct: 481 FESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLF 540
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
H+M +G P+ +T+I +L AC+H+GLV+EG YF+SM D+ ++P++EHY CMVDLLAR
Sbjct: 541 HDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLAR 600
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
+G + EA++F+ MP +ADA++W LLG+CR Y+N+E+ E+A + +LEP++PA +V+L
Sbjct: 601 SGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLL 660
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
SN+Y G W +VARI+ MR K G S + V +
Sbjct: 661 SNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTI 700
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 26/264 (9%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI +V+ + + + + +++ A+ M ARK FD++ ++N++S ++ E
Sbjct: 375 QIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI-----GE 429
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R+ +Q++ +D + FTF +L + + +G++LH L +K GF ++ +
Sbjct: 430 TGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISN 489
Query: 140 ALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+L+ +YS ++ A + F EM D+ NV+ WTS+I+ G A LF D+I
Sbjct: 490 SLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFH-----DMI 544
Query: 199 L---------WNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDV 244
L + ++S V + E ++ F M K + + M+ A +G V
Sbjct: 545 LSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLV 604
Query: 245 EECKRLFEEMP-ERNVFSWNGLIG 267
+E EMP + + W L+G
Sbjct: 605 QEALEFINEMPCKADALVWKTLLG 628
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 16/295 (5%)
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANN 272
+ R L ++ D + N++L+ Y+ G V +R+F+ M R++ SW + N
Sbjct: 65 LHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRN 124
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV--YAEYNGYQG-N 329
G E L ML G + PN T+ AC G L S V +A G+ G +
Sbjct: 125 GAEQEALVLLGEMLESG-LRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWGTD 182
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V VG ALIDM+A+ G + A VFN + + ++ W +I+ G A+ LF M
Sbjct: 183 VSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLE 242
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL---LARAG 446
G PDG T ++ AC G G S+ + +V +VD+ L
Sbjct: 243 DGFEPDGYTMSSMVSACAEQGSAGLG-QQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLG---SCRVYKNVELAELALERLTE-LEPKN 497
+ A KRMP + + W L+ C +N EL E L E +EP +
Sbjct: 302 SMECARKVFKRMPTH-NVMSWTALISGYVQCGGQEN-NAVELLCEMLNESIEPNH 354
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 280/516 (54%), Gaps = 48/516 (9%)
Query: 48 KQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
K+ A ++FDK+ D++V+SWN+M +GY N + ++ QM L + T VL
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVL 258
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
C L G+ +H L +K+ F I L+++YS
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYS--------------------- 297
Query: 168 VWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK- 226
CGD+ A +FE ER+V+ W ++++GY A +L QM K+
Sbjct: 298 ----------KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEG 347
Query: 227 ---DVISWNTMLSGYANNGDVEECKRLFEEMP----ERNVFSWNGLIGGYANNGLFFEVL 279
DV++ ++L A +G ++ K + + + E N+F N L+ Y G
Sbjct: 348 VKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGAN 407
Query: 280 DAFKRMLTE---------GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
F M+ + G + P+ T+ +L ACA L AL+ K +H Y NGY +
Sbjct: 408 SVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
V NAL+D+Y KCG++ A +F+ + +KDL++W +ISG MHG G A++ F+EM++A
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDA 527
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD ++FI IL AC+H GL+E+G +F M D++I P++EHY CMVDLL+R G L++
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A +F++ +PI DA IW LL CR+Y ++ELAE ER+ ELEP+N +V+L+NIY +
Sbjct: 588 AYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 647
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+W++V R++ + G +K PGCS IE+ V L
Sbjct: 648 AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNL 683
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 214/447 (47%), Gaps = 64/447 (14%)
Query: 32 KSDYITPRIITACAQLK-QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
K+ + +P I ++C ++ T R + ++TD N + G +N +V Q
Sbjct: 38 KATFFSP-IFSSCLPIRISATPTRTIDRQVTDYNAKILHFCQLGNLENAME---LVCMCQ 93
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
+L+ T+ VL+ C +L +G+++H ++ N + +G L+ LY+T
Sbjct: 94 KSELETK----TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGD 149
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ +VF M+++NV +W M++ Y GD + CLF++ E+ I+
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEG 198
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ A +LFD++ +DVISWN+M+SGY +NG + ER
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNG-----------LTERG------------ 235
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
L+ +K+M+ G + + ATI++VL CA G L K VH A + ++ +
Sbjct: 236 --------LEIYKQMMYLG-IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRI 286
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
N L+DMY+KCG ++ A+ VF M +++++W ++I+G GR GA+ L +M+
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKE 346
Query: 391 GEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGC--MVDLLARA 445
G D + IL AC G ++ G Y ++ M+ ++ + C ++D+ +
Sbjct: 347 GVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNL------FVCNALMDMYTKC 400
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLG 472
G + A M ++ D + W ++G
Sbjct: 401 GSMDGANSVFSTMVVK-DIISWNTMIG 426
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 296/535 (55%), Gaps = 67/535 (12%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A+ + ARK+FD + ++ VV W + + Y Q E V LF + P+
Sbjct: 194 LIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPD 253
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST---GKAIEAAYK 156
+T ++ +C ++ ++R G +LH L L+ G ++ V L+++Y+ G+A++ A K
Sbjct: 254 RYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANK 313
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEA 216
VF M P+ DVI W ++SGY V++ ++
Sbjct: 314 VFERM-------------------------------PKNDVISWTALISGY--VQSGVQE 340
Query: 217 RK---LFDQMPKKDV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFS----WNGL 265
K LF +M + + I+++++L A+ D + +++ + + N S N L
Sbjct: 341 NKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNAL 400
Query: 266 IGGYANNGLFFEVLDAFKRM--------LTEGRVFPND------------ATIVTVLSAC 305
+ YA +G E F ++ +TEGR FP D +T +++SA
Sbjct: 401 VSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAA 460
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A +G L + +H + G+ + V N+L+ MY++CG +E+A FN + +++I+W
Sbjct: 461 ASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWT 520
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++ISGLA HG ALSLFH+M G P+ +T+I +L AC+H+GLV EG YF+SM D
Sbjct: 521 SMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD 580
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ ++P++EHY CMVDLLAR+G + EA++F+ MP++ADA++W LLG+CR + N+E+ E+
Sbjct: 581 HGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEI 640
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ + ELEP++PA +V+LSN+Y D G W +VARI+ AMRD K G S +EV
Sbjct: 641 TAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEV 695
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 11/273 (4%)
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE-RNVFSWNG 264
G + + + R L + +D + N++L+ Y+ G V + +F+ M R++ SW
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC--ARLGALDFSKWVHVYAE 322
+ A NG L ML G + PN T+ AC L L + + +
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESG-LLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHK 180
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+ +V VG+ALIDM A+ G + +A VF+ + K ++ W +IS A+
Sbjct: 181 MGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF + G PD T ++ ACT +G V GL S+A+ + +VD+
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGLASDACVSCGLVDMY 299
Query: 443 ARAGRLAEAVDFV----KRMPIEADAVIWANLL 471
A++ + +A+D+ +RMP + D + W L+
Sbjct: 300 AKSN-IGQAMDYANKVFERMP-KNDVISWTALI 330
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ + +G +++ +++ ++ + A + F+++ D+NV+SW +M +G A++
Sbjct: 470 QQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKH 529
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFV 137
+ + LF M PN T+ VL +C + +REG+E + +G +
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEH 589
Query: 138 GTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSARCLFELA 192
+++L + ++ A + EM + + +VW +++ S +I ++A+ + EL
Sbjct: 590 YACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELE 649
Query: 193 PERDVILWNTIVSGYIDV 210
P RD + + + Y D
Sbjct: 650 P-RDPAPYVLLSNLYADA 666
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 189/512 (36%), Positives = 283/512 (55%), Gaps = 19/512 (3%)
Query: 44 CAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF 103
C ++++ ARK+FD + +++VVSWN M NGY +N F T +V+F QM + +
Sbjct: 170 CGEVEE---ARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASV 226
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
VL +C + L G +H LV + I V AL+++Y+ +++ A VF M E
Sbjct: 227 VSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVE 285
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEAR 217
R+VV WTSMINGYI GD SA LF+ L P I I+ + N+ + R
Sbjct: 286 RDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTI--ALILLACASLNNLKDGR 343
Query: 218 KLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
L + K+ + S +++ YA + +F + WN L+ G +N
Sbjct: 344 CLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNK 403
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
L E + FK+ML EG V N AT ++L A L L ++ Y +G+ N+ V
Sbjct: 404 LATEAIGLFKKMLMEG-VEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVA 462
Query: 334 NALIDMYAKCGIIENAVDVFNSM--DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
+LID+Y+KCG +E+A +FN++ D +D+ W+ II+G MHG G A+SLF +M +G
Sbjct: 463 TSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSG 522
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+ +TF +L +C+H G+V++GL F+ M D+ +P +HY CMVDLL RAGR+ EA
Sbjct: 523 VKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEA 582
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
D +K MP +W LLG+C +++NVEL E+A L ELEP N N+V+L+ +Y L
Sbjct: 583 YDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAAL 642
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
GRW+D ++ M D G +K P S IE V
Sbjct: 643 GRWEDAENVRQRMDDIGLRKAPAHSLIEAGTV 674
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 225/515 (43%), Gaps = 77/515 (14%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
++ L +TK LH ++TSGL D I ++ A + ARK+FD++ + + +
Sbjct: 34 AQSLTSTKQLH---AHLITSGLLSID-IRSVLVATYAHCGYVHNARKLFDELRQRGTLLY 89
Query: 69 NAMFNGY-AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N M Y A+ ++ + V + D P+ +T+P V+K+C ++ + G LH L L
Sbjct: 90 NFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTL 149
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ F +++FV +L+ +Y +E A KVF M E++VV W +MINGY G +A
Sbjct: 150 VSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALV 209
Query: 188 LF--------------------------ELAPERDV------------ILWNTIVSGYID 209
+F EL R V I+ N +V Y
Sbjct: 210 VFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKIVSNALVDMYAK 269
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
+M EAR +FD M ++DV+SW +M++GY NGD +
Sbjct: 270 CGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAK------------------------ 305
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN 329
L FK M EG + PN TI +L ACA L L + +H +
Sbjct: 306 -------SALSLFKIMQIEG-LRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSE 357
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V V +LIDMYAKC + + VF K + WN ++SG + A+ LF +M
Sbjct: 358 VAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLM 417
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
G + T +L A + ++ ++ S M V I+ ++D+ ++ G L
Sbjct: 418 EGVEINAATCNSLLPAYGILADLQP-VNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLE 476
Query: 450 EAVDFVKRMPIEA-DAVIWANLLGSCRVYKNVELA 483
A +P++ D +W+ ++ ++ + E A
Sbjct: 477 SAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETA 511
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 177/381 (46%), Gaps = 25/381 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
++LE + +H + + V ++ ++ A+ M AR +FD + +++VVSW
Sbjct: 237 KELEVGRRVHGLVEEKVLG----KKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWT 292
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+M NGY N ++ + LF M+ PN T ++L +C +N L++G LH V+K
Sbjct: 293 SMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQ 352
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
+ + V T+LI++Y+ + ++ VF + V W ++++G + A LF
Sbjct: 353 RLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLF 412
Query: 190 EL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANN 241
+ E + N+++ Y + ++ + + + +S +++ Y+
Sbjct: 413 KKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKC 472
Query: 242 GDVEECKRLFEEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G +E ++F +P +++F W+ +I GY +G + FK+M+ G V PND T
Sbjct: 473 GSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSG-VKPNDVTFT 531
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN-----ALIDMYAKCGIIENAVDVFN 354
+VL +C+ G +D ++ + + + + N ++D+ + G ++ A D+
Sbjct: 532 SVLQSCSHAGMVDDGLYLFKFM----LKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIK 587
Query: 355 SMD-TKDLITWNTIISGLAMH 374
+M W ++ MH
Sbjct: 588 TMPFMPGHAVWGALLGACVMH 608
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 159/314 (50%), Gaps = 15/314 (4%)
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN---TMLSGYANNGDVEEC 247
LAP+ + +++ Y +++ ++L + ++S + +++ YA+ G V
Sbjct: 17 LAPK--TTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNA 74
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++LF+E+ +R +N +I Y G +FE + F ML P++ T V+ AC+
Sbjct: 75 RKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSE 134
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L +++ + +H + + ++ V N+L+ MY CG +E A VF++M K +++WNT+
Sbjct: 135 LLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTM 194
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAM 424
I+G +G AL +F++M ++G DG + + +L AC ++ +E G + +
Sbjct: 195 INGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVL 254
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
IV +VD+ A+ G + EA M +E D V W +++ + + + A
Sbjct: 255 GKKIVSN-----ALVDMYAKCGSMDEARLVFDNM-VERDVVSWTSMINGYILNGDAKSA- 307
Query: 485 LALERLTELEPKNP 498
L+L ++ ++E P
Sbjct: 308 LSLFKIMQIEGLRP 321
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 294/546 (53%), Gaps = 23/546 (4%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ LE K +H Q+V G +++ ++ A+L + + +F+ +T+ N VSWN
Sbjct: 181 DSLELGKMVH---AQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWN 237
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM +G N H LF +MK PN +T V K+ K+ + G+E+ +
Sbjct: 238 AMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL 297
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV---WTSMINGYISCGDIVSAR 186
G N+ VGTALI++YS ++ A VF + + N V W +MI+GY G A
Sbjct: 298 GIEGNVLVGTALIDMYSKCGSLHDARSVF-DTNFINCGVNTPWNAMISGYSQSGCSQEAL 356
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARK--LFDQMPKKDVISW----------NTM 234
L+ + + + + Y V N I A K F ++ V+ N +
Sbjct: 357 ELYVQMCQNGI---TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAI 413
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
Y+ G +E+ +++F+ M ER++ SW L+ Y+ + L E L F M EG PN
Sbjct: 414 ADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA-PN 472
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T +VL +CA L L++ + VH G C+ +ALIDMYAKCG I A VF+
Sbjct: 473 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 532
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ D+++W IISG A HG AL LF M+ +G + +T + +L AC+H G+VEE
Sbjct: 533 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEE 592
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
GL YFQ M Y +VP++EHY C++DLL R GRL +A++F+++MP+E + ++W LLG C
Sbjct: 593 GLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGC 652
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
RV+ NVEL E+A ++ + P+ A +V+LSN Y + G ++D ++ M+D G KK PG
Sbjct: 653 RVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPG 712
Query: 535 CSSIEV 540
S I V
Sbjct: 713 YSWISV 718
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 178/400 (44%), Gaps = 29/400 (7%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRAN--IFVGTALIELYSTGKAIEAAYKVFGEMDE 163
VL+ C + ++RE + +H LVLK+ F + + +YS AA VF EM +
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 164 RNVVVWTSMINGYISCGDIVSARCLF------ELAPER---DVILWNTIVSGYIDVRNMI 214
RNV WT MI G G F + P++ I+ + I +++ M+
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A+ + +S ++L+ YA G +E+ +F M E N SWN +I G +NGL
Sbjct: 190 HAQIVMRGFATHIFVS-TSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E D F RM G PN T+V+V A +L ++ K V A G +GNV VG
Sbjct: 249 HLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307
Query: 335 ALIDMYAKCGIIENAVDVF--NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
ALIDMY+KCG + +A VF N ++ WN +ISG + G AL L+ +M G
Sbjct: 308 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367
Query: 393 MPDGITFIGILCACT-----HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
D T+ + A G V G+ +D +V + D ++ G
Sbjct: 368 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVL--KCGLDLMVVSV---NNAIADAYSKCGF 422
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
L + RM E D V W L+ + Y L E AL
Sbjct: 423 LEDVRKVFDRME-ERDIVSWTTLVTA---YSQSSLGEEAL 458
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 301/534 (56%), Gaps = 14/534 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV SG++ I +++ ++ + A K+F ++ + V+WN M +GY Q+
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ F +M +P+ TF +L S K L +++HC ++++ +IF+ +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
ALI+ Y + + A +F + + +VVV+T+MI+GY+ G + + +F +++P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM----LSGYANNGDVEECKR 249
++ V G + + R+L + KK + + + YA G +
Sbjct: 440 NEITLVSILPVIGILLALKL--GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+FE + +R++ SWN +I A + +D F++M G + + +I LSACA L
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACANLP 556
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ F K +H + + +V + LIDMYAKCG ++ A++VF +M K++++WN+II+
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 370 GLAMHGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
HG+ +L LFHEM + +G PD ITF+ I+ +C H+G V+EG+ +F+SM DY I
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
PQ EHY C+VDL RAGRL EA + VK MP DA +W LLG+CR++KNVELAE+A
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+L +L+P N +V++SN + + W+ V +++ M++ +K+PG S IE+N+
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINK 790
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 229/471 (48%), Gaps = 11/471 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K + + V + G++ ++++ +I A + ++ K+FD++ ++ V WN M
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NGYA+ +V+ F+ M+ PN TF VL C + G +LH LV+ +G
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-E 190
+ +L+ +YS + A K+F M + V W MI+GY+ G + + F E
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 191 LAPE---RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGD 243
+ D I +++++ N+ +++ + + D+ + ++ Y
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V + +F + +V + +I GY +NGL+ + L+ F R L + ++ PN+ T+V++L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVKISPNEITLVSILP 449
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
L AL + +H + G+ +G A+IDMYAKCG + A ++F + +D+++
Sbjct: 450 VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+ A + A+ +F +M +G D ++ L AC ++ G +
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA-IHGFM 568
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ +S+ + ++D+ A+ G L A++ K M E + V W +++ +C
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 222/484 (45%), Gaps = 33/484 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQ 77
Q+ ++ + + Y RI+ A + KMF ++ ++ WN++ + + +
Sbjct: 56 QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N + + +M P+ TFP ++K+CV + + + L V G N FV
Sbjct: 116 NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFV 175
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
++LI+ Y I+ K+F + +++ V+W M+NGY CG + S F + D
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQ 234
Query: 198 ILWNTIVSGYIDVRNMIEARKLFD---QMPKKDVISW--------NTMLSGYANNGDVEE 246
I N + + V ++ ++ L D Q+ V+S N++LS Y+ G ++
Sbjct: 235 ISPNAVT--FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+LF M + +WN +I GY +GL E L F M++ G V P+ T ++L + +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG-VLPDAITFSSLLPSVS 351
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ L++ K +H Y + ++ + +ALID Y KC + A ++F+ ++ D++ +
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITF------IGILCACTHMGLVEEGLSYFQ 420
+ISG +G +L +F + P+ IT IGIL A + L E +
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA---LKLGRELHGFII 468
Query: 421 SMAMDYSIVPQIEHYGC-MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
D + GC ++D+ A+ GR+ A + +R+ + D V W +++ C N
Sbjct: 469 KKGFDNRC-----NIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Query: 480 VELA 483
A
Sbjct: 523 PSAA 526
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 174/386 (45%), Gaps = 32/386 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ E ++ QI ++ + ++T +I A + + ++ A+ +F + +VV +
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM +GY N + + +F + K+ PN T +L + AL+ G ELH ++K
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +G A+I++Y+ + AY++F + +R++V W SMI RC
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT-----------RCAQ 519
Query: 190 ELAPERDVILWNTI-VSGYI-DVRNMIEARKLFDQMPKK-----------------DVIS 230
P + ++ + VSG D ++ A +P + DV S
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
+T++ YA G+++ +F+ M E+N+ SWN +I N+G + L F M+ +
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 291 VFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ P+ T + ++S+C +G +D ++ E G Q ++D++ + G + A
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 350 VDVFNSMD-TKDLITWNTIISGLAMH 374
+ SM D W T++ +H
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 150/311 (48%), Gaps = 15/311 (4%)
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
++L++C N LR+G+++H ++ N + + ++ +Y+ + K+F +D R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 165 NVVV--WTSMINGYISCGDIVSARCL------FELAPERDVILWNTIVSGYIDVRNMIEA 216
+ W S+I+ ++ G + A F ++P DV + +V + ++N
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP--DVSTFPCLVKACVALKNFKGI 157
Query: 217 RKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
L D + + ++++ Y G ++ +LF+ + +++ WN ++ GYA
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G V+ F M + ++ PN T VLS CA +D +H +G +
Sbjct: 218 GALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
N+L+ MY+KCG ++A +F M D +TWN +ISG G +L+ F+EM ++G
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 393 MPDGITFIGIL 403
+PD ITF +L
Sbjct: 337 LPDAITFSSLL 347
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
+L AC+ L K VH + N G+ ++ MYA CG + +F +D +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 360 -DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+ WN+IIS +G AL+ + +M G PD TF ++ AC +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 290/540 (53%), Gaps = 23/540 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q+ GL + + + ++ AR++FD++ ++ V+WNA+ GYA+N
Sbjct: 38 VHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGL 97
Query: 81 HRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + +M+ + P+ T VL +C AL E+H L+ G + V
Sbjct: 98 PSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVS 157
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
TA+++ Y A+EAA VF M RN V W +MI+GY G+ A LF + V
Sbjct: 158 TAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVD 217
Query: 199 LWNTIVS---------GYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVE 245
+ + V GY+D E R++ + + + +V N +++ YA +
Sbjct: 218 VTDASVLAALQACGELGYLD-----EVRRVHELLVRVGLSSNVSVTNALITTYAKCKRAD 272
Query: 246 ECKRLFEEMPERNV-FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
++F E+ + SWN +I G+ N + F RM E V P+ T+V+V+ A
Sbjct: 273 LAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN-VRPDSFTLVSVIPA 331
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
A + ++W+H Y+ + +V V ALIDMY+KCG + A +F+S + +ITW
Sbjct: 332 VADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITW 391
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
N +I G HG G A+ LF EMK G +P+ TF+ +L AC+H GLV+EG YF SM
Sbjct: 392 NAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKK 451
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
DY + P +EHYG MVDLL RAG+L EA F+K MPIE ++ +LG+C+++KNVELAE
Sbjct: 452 DYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAE 511
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
+ + + EL P+ V+L+NIY + WKDVAR++ AM G +K PG S I++ NEV
Sbjct: 512 ESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEV 571
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 166/363 (45%), Gaps = 13/363 (3%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P TF +LK C L G +H + G + TAL +Y + A +V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSA-----RCLFELAPER-DVILWNTIVSGYIDVR 211
F M R+ V W +++ GY G SA R E ER D + +++ D R
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 212 NMIEARKLFD---QMPKKDVISWNT-MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ R++ + ++++ +T +L Y G VE + +F+ MP RN SWN +I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
GYA+NG E + F RM+ EG V DA+++ L AC LG LD + VH G
Sbjct: 194 GYADNGNATEAMALFWRMVQEG-VDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFHE 386
NV V NALI YAKC + A VFN + + K I+WN +I G + A LF
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
M+ PD T + ++ A + + + ++ + + + ++D+ ++ G
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQA-RWIHGYSIRHQLDQDVYVLTALIDMYSKCG 371
Query: 447 RLA 449
R++
Sbjct: 372 RVS 374
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 188/405 (46%), Gaps = 23/405 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A + L + +H + +GL++ ++ ++ A + + AR +FD + +N V
Sbjct: 130 ADARALHACREVHAF---ALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSV 186
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SWNAM +GYA N + LF +M + + L++C ++ L E +H L+
Sbjct: 187 SWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELL 246
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSA 185
++ G +N+ V ALI Y+ K + A +VF E+ +++ + W +MI G+ A
Sbjct: 247 VRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDA 306
Query: 186 RCLF---ELAPER-DVILWNTIVSGYIDVRNMIEARKL----FDQMPKKDVISWNTMLSG 237
LF +L R D +++ D+ + ++AR + +DV ++
Sbjct: 307 ERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDM 366
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G V +RLF+ +R+V +WN +I GY ++G ++ F+ M G PN+ T
Sbjct: 367 YSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGS-LPNETT 425
Query: 298 IVTVLSACARLGALD-FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
++VL+AC+ G +D K+ + G + + ++D+ + G ++ A +M
Sbjct: 426 FLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM 485
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
I G++++G GA L ++ A E I +G
Sbjct: 486 ---------PIEPGISVYGAMLGACKLHKNVELAEESAQIIFELG 521
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 291/527 (55%), Gaps = 7/527 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV G E++ + +I+ ++L + AR +FDK+ ++ V+WN+M GY +N
Sbjct: 215 QVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNG 274
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V +F +M+ P TF V+KSC + L + + C LK+GF + V T
Sbjct: 275 QDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVIT 334
Query: 140 ALIELYSTGKAIEAAYKVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+ S K ++ A +F M+E +NVV WT+MI+G + G A LF V
Sbjct: 335 ALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVK 394
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT----MLSGYANNGDVEECKRLFEEM 254
+ S + V + ++ ++ K + ++ +L Y G+ + ++FE +
Sbjct: 395 PNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEII 454
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR-LGALDF 313
+++ +W+ ++ GYA G E F +++ EG + PN+ T +V++ACA A +
Sbjct: 455 EAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG-IKPNEFTFSSVINACASPTAAAEQ 513
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K H YA +CV +AL+ MYAK G I++A +VF +DL++WN++ISG +
Sbjct: 514 GKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQ 573
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG+ AL +F EM+ D +TFIG++ ACTH GLVE+G YF SM D+ I P ++
Sbjct: 574 HGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMK 633
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY CM+DL +RAG L +A+ + MP A +W LLG+ RV++NVEL ELA E+L L
Sbjct: 634 HYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISL 693
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+P++ A +V+LSN+Y G W++ ++ M KK PG S IEV
Sbjct: 694 QPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEV 740
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 227/487 (46%), Gaps = 18/487 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q V GL + ++ + + + R++FD++ ++NVVSW ++ GY+ N
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V LF QM+ +PN +T V+ + V + G ++H +V+K+GF I V
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFN 233
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---ELAPERD 196
+LI LYS + A VF +M+ R+ V W SMI GY+ G + +F +LA +
Sbjct: 234 SLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKP 293
Query: 197 V-ILWNTIVSGYIDVRNMIEAR----KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
+ + +++ +R + + K D I ++ + ++++ LF
Sbjct: 294 THMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLF 353
Query: 252 EEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
M E +NV SW +I G NG + ++ F +M EG V PN T +L+ +
Sbjct: 354 SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG-VKPNHFTYSAILTVHYPV-- 410
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
F +H Y+ + VG AL+D Y K G +AV VF ++ KDL+ W+ +++G
Sbjct: 411 --FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAG 468
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A G A LFH++ G P+ TF ++ AC E F + A+ +
Sbjct: 469 YAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNN 528
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+ +V + A+ G + A + KR E D V W +++ Y A+ ALE
Sbjct: 529 ALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISG---YSQHGQAKKALEVF 584
Query: 491 TELEPKN 497
E++ +N
Sbjct: 585 DEMQKRN 591
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 26/369 (7%)
Query: 53 ARKMFDKITDQ--NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
A +FDKI + + N + Y++++ + + LF + P+ T V C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
+ G ++HC +K G ++ VGT+L+++Y + + +VF EM ERNVV WT
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 171 SMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYID---------VRNMIE 215
S++ GY G LF + P R + +T+++ ++ V M+
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTV--STVIAALVNEGVVGIGLQVHAMVV 221
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
+ +P +N+++S Y+ G + + + +F++M R+ +WN +I GY NG
Sbjct: 222 KHGFEEAIP-----VFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQD 276
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
EV + F +M G V P T +V+ +CA L L K + A +G+ + V A
Sbjct: 277 LEVFEIFNKMQLAG-VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITA 335
Query: 336 LIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
L+ +KC +++A+ +F+ M+ K++++W +ISG +G A++LF +M+ G P
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKP 395
Query: 395 DGITFIGIL 403
+ T+ IL
Sbjct: 396 NHFTYSAIL 404
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 10/241 (4%)
Query: 250 LFEEMPER--NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
LF+++P R + N L+ Y+ + E L+ F +L + P+++T+ V + CA
Sbjct: 47 LFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLL-HSSLQPDESTLSCVFNICA- 104
Query: 308 LGALD--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
G+LD + VH G +V VG +L+DMY K + + VF+ M +++++W
Sbjct: 105 -GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++++G + +G LF +M+ G +P+ T ++ A + G+V GL +M +
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQ-VHAMVVK 222
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL-GSCRVYKNVELAE 484
+ I + ++ L +R G L +A D +M I D V W +++ G R +++E+ E
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIAGYVRNGQDLEVFE 281
Query: 485 L 485
+
Sbjct: 282 I 282
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 294/547 (53%), Gaps = 23/547 (4%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ LE K +H Q+V G +++ ++ A+L + + +F+ +T+ N VSWN
Sbjct: 235 DSLELGKMVH---AQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWN 291
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM +G N H LF +MK PN +T V K+ K+ + G+E+ +
Sbjct: 292 AMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL 351
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV---WTSMINGYISCGDIVSAR 186
G N+ VGTALI++YS ++ A VF + + N V W +MI+GY G A
Sbjct: 352 GIEGNVLVGTALIDMYSKCGSLHDARSVF-DTNFINCGVNTPWNAMISGYSQSGCSQEAL 410
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARK--LFDQMPKKDVISW----------NTM 234
L+ + + + + Y V N I A K F ++ V+ N +
Sbjct: 411 ELYVQMCQNGI---TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAI 467
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
Y+ G +E+ +++F+ M ER++ SW L+ Y+ + L E L F M EG PN
Sbjct: 468 ADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA-PN 526
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T +VL +CA L L++ + VH G C+ +ALIDMYAKCG I A VF+
Sbjct: 527 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 586
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ D+++W IISG A HG AL LF M+ +G + +T + +L AC+H G+VEE
Sbjct: 587 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEE 646
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
GL YFQ M Y +VP++EHY C++DLL R GRL +A++F+++MP+E + ++W LLG C
Sbjct: 647 GLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGC 706
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
RV+ NVEL E+A ++ + P+ A +V+LSN Y + G ++D ++ M+D G KK PG
Sbjct: 707 RVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPG 766
Query: 535 CSSIEVN 541
S I V
Sbjct: 767 YSWISVK 773
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 178/400 (44%), Gaps = 29/400 (7%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRAN--IFVGTALIELYSTGKAIEAAYKVFGEMDE 163
VL+ C + ++RE + +H LVLK+ F + + +YS AA VF EM +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 164 RNVVVWTSMINGYISCGDIVSARCLF------ELAPER---DVILWNTIVSGYIDVRNMI 214
RNV WT MI G G F + P++ I+ + I +++ M+
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
A+ + +S ++L+ YA G +E+ +F M E N SWN +I G +NGL
Sbjct: 244 HAQIVMRGFATHIFVS-TSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E D F RM G PN T+V+V A +L ++ K V A G +GNV VG
Sbjct: 303 HLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361
Query: 335 ALIDMYAKCGIIENAVDVF--NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
ALIDMY+KCG + +A VF N ++ WN +ISG + G AL L+ +M G
Sbjct: 362 ALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421
Query: 393 MPDGITFIGILCACT-----HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
D T+ + A G V G+ +D +V + D ++ G
Sbjct: 422 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVL--KCGLDLMVVSV---NNAIADAYSKCGF 476
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
L + RM E D V W L+ + Y L E AL
Sbjct: 477 LEDVRKVFDRME-ERDIVSWTTLVTA---YSQSSLGEEAL 512
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 278/502 (55%), Gaps = 13/502 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ + ++ AR++FD++ ++NV SW ++ +GY + + LF QM + N
Sbjct: 119 MISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPE----KN 174
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ + + + E + + NI TA+++ Y I+ A+++F
Sbjct: 175 VVSWTTAVVGYAQNGFIDEARD----IFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFY 230
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
+M +RN+ W MI+G I+ + A LF P+R+ + W T+V+G M ARK
Sbjct: 231 QMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKY 290
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD MP KD+ +WN M++ Y + G + E LF MPE+N+ SWN LI GYA NG L
Sbjct: 291 FDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSL 350
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
ML PN+ TI +VL+AC + L H + G++ + + N L+
Sbjct: 351 RYLILML-RSNFKPNETTITSVLTACDSILEL---MQAHGLVIHLGFEQDKVLANGLVTT 406
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y++CG + +A +F+ ++ KD+++W +I + HG G AL +F M +G PDGITF
Sbjct: 407 YSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITF 466
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC+H GLV++G F SM+ Y + P+ EHY C+VD+L RAG + +A+ V MP
Sbjct: 467 VGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMP 526
Query: 460 I-EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
E D + LLG+CR++K+V LA E+L E EP + ++V+L+N Y G+W + A
Sbjct: 527 PHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFA 586
Query: 519 RIKVAMRDTGFKKLPGCSSIEV 540
++ M++ KK PG S IEV
Sbjct: 587 EVRKEMKERNVKKEPGFSQIEV 608
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 186/392 (47%), Gaps = 48/392 (12%)
Query: 15 TKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
T + +I T++ Y + I+ ++ ARK+FD++ ++ VS+ +M
Sbjct: 32 TPNPSKITTRIPFPVFASDTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITV 91
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y +N+ +LF ++ + N
Sbjct: 92 YLKNKDLPQAEILFREIPE---------------------------------------RN 112
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ +A+I Y ++ A +VF +M ERNV WTS+++GY G++ A LF PE
Sbjct: 113 VVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPE 172
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
++V+ W T V GY + EAR +F+QMP+K++I+W M+ Y N +++E LF +M
Sbjct: 173 KNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQM 232
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
P+RN++SWN +I G N E + F M N+ + T+++ AR G ++ +
Sbjct: 233 PQRNLYSWNIMISGCINANRLNEAIQLFNSMPQR-----NEVSWTTLVTGLARNGMMELA 287
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
+ Y ++ + ++ NA+I Y G + A ++FN M K++++WN +I G A +
Sbjct: 288 R---KYFDHMPTK-DIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARN 343
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
G + +L M + P+ T +L AC
Sbjct: 344 GPESNSLRYLILMLRSNFKPNETTITSVLTAC 375
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 50/321 (15%)
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV 210
++ A KVF EM R+ V + SMI Y+ D+ A LF PER+V+ + ++SGY+
Sbjct: 67 VKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRA 126
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+ +AR++FDQM +++V SW +++SGY G+V+E RLF +MPE+NV SW + GYA
Sbjct: 127 GRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYA 186
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
NG E D F +M + N+
Sbjct: 187 QNGFIDEARDIFNQMP----------------------------------------EKNI 206
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
A++ Y + I+ A ++F M ++L +WN +ISG R A+ LF+ M
Sbjct: 207 IAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQR 266
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
E +++ ++ G++E YF D+ I + M+ G +AE
Sbjct: 267 NE----VSWTTLVTGLARNGMMELARKYF-----DHMPTKDIAAWNAMITAYVDQGSMAE 317
Query: 451 AVDFVKRMPIEADAVIWANLL 471
A + MP E + V W L+
Sbjct: 318 ASNLFNLMP-EKNIVSWNALI 337
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 26/296 (8%)
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D N +S G V+E +++F+EMP R+ S+ +I Y N + F R +
Sbjct: 50 DTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILF-REI 108
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
E V + A I S R G LD ++ V+ + + NV +L+ Y K G +
Sbjct: 109 PERNVVADSAMI----SGYVRAGRLDKAR--QVFDQM--VERNVFSWTSLVSGYFKIGNV 160
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+ A+ +FN M K++++W T + G A +G A +F++M + I + ++ +
Sbjct: 161 DEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEK----NIIAWTAMVKSY 216
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYG--CMVDLLARAGRLAEAVDFVKRMPIEADA 464
++E F M PQ Y M+ A RL EA+ MP + +
Sbjct: 217 VENDEIDEAFELFYQM-------PQRNLYSWNIMISGCINANRLNEAIQLFNSMP-QRNE 268
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
V W L+ + +N + ELA + + K+ A + + Y D G + + +
Sbjct: 269 VSWTTLVTG--LARN-GMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNL 321
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 27/243 (11%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L Q V+ G E+ + ++T ++ + AR +FD++ +++VSW AM Y+
Sbjct: 381 LMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSN 440
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIF 136
+ + +F +M + A P+ TF +L +C +++G+ L + G
Sbjct: 441 HGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAE 500
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
+ L+++ + A KV EM C V L +D
Sbjct: 501 HYSCLVDILGRAGEMNKAMKVVSEMPPH-------------ECDGAVLGALLGACRLHKD 547
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
V L N I KL ++ P S+ + + YA G E + +EM E
Sbjct: 548 VGLANHI------------GEKLIEKEPTSSG-SYVLLANAYAACGKWNEFAEVRKEMKE 594
Query: 257 RNV 259
RNV
Sbjct: 595 RNV 597
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/587 (30%), Positives = 300/587 (51%), Gaps = 63/587 (10%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI V G + ++ A+ K++ + + F + ++N VSW+A+ G QN+
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQND 254
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R + LF +M+K + TF V +SC ++ALR G +LH LK F ++ +GT
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG-----DIVSARCLFELAP- 193
A +++Y + A K+F + N+ + ++I GY D VS F
Sbjct: 315 ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAV 374
Query: 194 -------------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM 234
+ ++ + N I+ Y ++EA +F++M +D +SWN +
Sbjct: 375 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 434
Query: 235 LSGYANNGD-------------------------------------VEECKRLFEEMPER 257
++ + NG+ +E+ ++L + + E+
Sbjct: 435 IAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ 494
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
V SWN +I G++ E F +ML G V P++ T T+L CA L ++ K +
Sbjct: 495 TVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG-VDPDNFTYATILDTCANLVTVELGKQI 553
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H Q + + + L+DMY+KCG +++ +F +D +TWN ++ G A HG G
Sbjct: 554 HAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLG 613
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL +F M+ P+ TF+ +L AC HMGLVE+GL YF SM +Y + PQ+EHY C
Sbjct: 614 EEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSC 673
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
+VD++ R+G++++A++ ++ MP EADAVIW LL C+++ NVE+AE A + +LEP++
Sbjct: 674 VVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPED 733
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A +V+LSNIY + G W +V +++ MR G KK PGCS IE+ V
Sbjct: 734 SAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEV 780
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 236/560 (42%), Gaps = 140/560 (25%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A+K+FD + +++VVSWN++ +GY N HR V+ +F QM ++ + + TF +VLKSC
Sbjct: 127 AQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSS 186
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ G ++H L +K GF ++ G+AL+++Y+ K ++ + + F M E+N V W+++
Sbjct: 187 LEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAI 246
Query: 173 INGYISCGDIVSARCLFE-----------------------LAPER-------------- 195
I G + D+ LF+ L+ R
Sbjct: 247 IAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDF 306
Query: 196 --DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN------------ 241
DV++ + Y+ N+ +A+KLF+ +P ++ S+N ++ GYA +
Sbjct: 307 GTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLS 366
Query: 242 ----------GDVE----------------------------ECKRL------FEEMPER 257
GD+E +C L FEEM R
Sbjct: 367 GAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR 426
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+ SWN +I + NG + L F R+ +RLG F
Sbjct: 427 DAVSWNAIIAAHEQNGNEEKTLSLF----IHNRIIK------------SRLGLDSF---- 466
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
VG ALIDMY+KCG++E A + + + + +++WN IISG ++ +
Sbjct: 467 --------------VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 512
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A F +M G PD T+ IL C ++ VE G + + +
Sbjct: 513 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISST 571
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE-----RLTE 492
+VD+ ++ G + + ++ P D V W ++ Y L E AL+ +L
Sbjct: 572 LVDMYSKCGNMQDFQLIFEKAP-NRDFVTWNAMVCG---YAQHGLGEEALKIFEYMQLEN 627
Query: 493 LEPKNPANFVMLSNIYGDLG 512
++P N A F+ + G +G
Sbjct: 628 VKP-NHATFLAVLRACGHMG 646
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 199/452 (44%), Gaps = 58/452 (12%)
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
T +++ FN +++ F + F+ + TF + + C AL G+
Sbjct: 5 TSRHLFPIRFFFNFQSKSPFKTLPISPFSSYQATPTKKK--TFSHIFQECSDRKALCPGK 62
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+ H ++ F+ +FV LI++Y +E A+KVF M +R+ V W +M+ GY G
Sbjct: 63 QAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRG 122
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYI---DVRNMIEA------------RKLFDQMPK 225
DI A+ LF+ PERDV+ WN+++SGY+ D R +I+ R F + K
Sbjct: 123 DIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLK 182
Query: 226 K------------------------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
DV++ + +L YA ++ + F MPE+N S
Sbjct: 183 SCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVS 242
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
W+ +I G N L+ FK M G V + +T +V +CA L AL +H +A
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAG-VGVSQSTFASVFRSCAGLSALRLGSQLHGHA 301
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
+ +V +G A +DMY KC + +A +FNS+ +L ++N II G A +G G
Sbjct: 302 LKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGL- 360
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
D ++ G AC + EGL ++M I ++D+
Sbjct: 361 -------------DEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVANAILDM 406
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+ G L EA + M + DAV W ++ +
Sbjct: 407 YGKCGALVEACLVFEEM-VSRDAVSWNAIIAA 437
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 4/300 (1%)
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
L E P V + N ++ YI ++ A K+FD MP++D +SWN ML GYA GD+
Sbjct: 70 LTEFKPT--VFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVA 127
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++LF+ MPER+V SWN LI GY +NG +V+D F +M G VF + T VL +C+
Sbjct: 128 QKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVF-DRTTFAVVLKSCSS 186
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L +H A G+ +V G+AL+DMYAKC ++ ++ F+SM K+ ++W+ I
Sbjct: 187 LEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAI 246
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G + G L LF EM+ AG TF + +C + + G S A+
Sbjct: 247 IAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG-SQLHGHALKTD 305
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ +D+ + L++A +P A ++G R K + L E++L
Sbjct: 306 FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSL 365
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 279/505 (55%), Gaps = 41/505 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++TA AQ+ ++ AR +FD+I + NVV+WNA+ GY QN + LF +M + N
Sbjct: 464 MMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM----PVKN 519
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ ++ V+ RE EL LIEL+ +G +
Sbjct: 520 SASWAAMIAGFVQNEESREALEL------------------LIELHRSGSVPSDS----- 556
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIE 215
+TS ++ + GD+ R + LA + + + N ++S Y N+ +
Sbjct: 557 --------SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVED 608
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
+F + KD +SWN+++SG + N +++ + +FE+MP+R+V SW +I Y G
Sbjct: 609 GSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHG 668
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
LD F ML G + PN T+ ++LSAC LGA+ + H G+ + VGN+
Sbjct: 669 EVALDLFLDMLARG-IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNS 727
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
LI MY KCG E+ VF M DLITWN ++ G A +G G A+ +F +M+ G +PD
Sbjct: 728 LITMYFKCGY-EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPD 786
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFV 455
++F+G+LCAC+H GLV+EG ++F SM Y I+P + HY CMVDLL RAG L+EA +
Sbjct: 787 QMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALI 846
Query: 456 KRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWK 515
+ MP++ D+VIW LLG+CR+++NVEL + ERL ++ A +V+LSN++ G W
Sbjct: 847 ENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWD 906
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEV 540
VA I+ M+D G K PG S I+V
Sbjct: 907 KVAEIRKLMKDQGLTKEPGISWIQV 931
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 212/410 (51%), Gaps = 32/410 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T +M+ AR++FD++ ++N VSW M +GY + +F +M + A P+
Sbjct: 301 VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPD 360
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
F +VL + ++ L L + +K G+ ++ VG+A++ Y+ +++ A F
Sbjct: 361 QSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFE 420
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
M ERN WT+MI + CG + A L+E PE+ V +++ Y V + +AR +
Sbjct: 421 TMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLI 480
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD++ +V++WN +++GY NG ++E K LF++MP +N SW +I G+ N E L
Sbjct: 481 FDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREAL 540
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ + G V P+D++ + LSACA +G ++ + +H A G Q N V N LI M
Sbjct: 541 ELLIELHRSGSV-PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISM 599
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH------------------------- 374
YAKCG +E+ VF ++ KD ++WN++ISGL+ +
Sbjct: 600 YAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAII 659
Query: 375 ------GRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
G G AL LF +M G P+ +T +L AC ++G ++ G +
Sbjct: 660 SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 196/390 (50%), Gaps = 52/390 (13%)
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF--------- 189
T + EL G+ +E A +VF EM +R+VV W SMINGY G + AR LF
Sbjct: 176 TRIQELGRLGR-VEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 190 ----------------------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
E ER+V+ WN ++SGY+ ++ ARKLFD+MP+K+
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKN 294
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML- 286
V SWN++++GY + + E + LF++MPERN SW +I GY + ++E D F +M
Sbjct: 295 VASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR 354
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
T R P+ + V VLSA L L+ + A GY+G+V VG+A+++ Y + G +
Sbjct: 355 TVAR--PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSL 412
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI--TFIGILC 404
+ A+ F +M ++ +W T+I+ A GR A+ L+ +P+ T ++
Sbjct: 413 DLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYE------RVPEQTVATKTAMMT 466
Query: 405 ACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
A +G +++ F D + P + + ++ + G L EA D ++MP++ A
Sbjct: 467 AYAQVGRIQKARLIF-----DEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSA 521
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELE 494
WA ++ + E + ALE L EL
Sbjct: 522 S-WAAMIAG---FVQNEESREALELLIELH 547
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 14/321 (4%)
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
P+ + NT + + + EAR++F++M ++DV+SWN+M++GY+ NG V+E + LF+
Sbjct: 167 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFD 226
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+N+ +W L+ GYA G E + F+ M TE V +A I S + G L
Sbjct: 227 AFVGKNIRTWTILLTGYAKEGRIEEAREVFESM-TERNVVSWNAMI----SGYVQNGDLK 281
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
++ ++ E + NV N+++ Y C + A ++F+ M ++ ++W +ISG
Sbjct: 282 NAR--KLFDEMP--EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYV 337
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
A +F +M PD F+ +L A T + +E + + +A+ +
Sbjct: 338 HISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLEL-IGSLRPIAIKTGYEGDV 396
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+++ R G L A+ F + MP E + W ++ + ++ A ER+ E
Sbjct: 397 VVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPE 455
Query: 493 LEPKNPANFVMLSNIYGDLGR 513
+ A + Y +GR
Sbjct: 456 ---QTVATKTAMMTAYAQVGR 473
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 52/294 (17%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I + + +G + + Y+ +I+ A+ + +F I ++ VSWN++ +G ++N
Sbjct: 577 IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYM 636
Query: 81 HRTVVVLFTQMKKLDAM-------------------------------PNCFTFPIVLKS 109
V+F +M K D + PN T +L +
Sbjct: 637 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSA 696
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C + A++ GE+ H L+ K GF +FVG +LI +Y E + VF EM E +++ W
Sbjct: 697 CGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC-GYEDGFCVFEEMPEHDLITW 755
Query: 170 TSMINGYISCGDIVSARCLFE------LAPERDV---ILWNTIVSGYIDVRNMIEARKLF 220
+++ G G A +FE + P++ +L +G +D E F
Sbjct: 756 NAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVD-----EGWAHF 810
Query: 221 DQMPKKD-----VISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGG 268
+ M +K V + M+ G + E + L E MP + + W L+G
Sbjct: 811 NSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA 864
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/374 (43%), Positives = 231/374 (61%), Gaps = 6/374 (1%)
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
+ SCG + + L +L D + NT+++ Y + ++ ARK+FD+M K V+SW
Sbjct: 85 FKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSW 144
Query: 232 NTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
TM+ YA E +LF M N+F WN +I G+ + + E L F M G
Sbjct: 145 ATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG- 203
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
V + T+ ++L AC LGAL+ KW+HVY E + +V +G AL+DMYAKCG IE+A+
Sbjct: 204 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 263
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
VF M KD++TW +I GLAM G+G AL LFHEM+ + PD ITF+G+L AC+H G
Sbjct: 264 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 323
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
LV EG++YF SM Y I P IEHYGCMVD+L RAGR+AEA D ++ MP+ D + L
Sbjct: 324 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 383
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
L +CR++ N+ +AE A ++L EL+PKN +V+LSNIY + W+ +++ M + K
Sbjct: 384 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 443
Query: 531 KLPGCSSIEVNEVV 544
K PGCS+IEV VV
Sbjct: 444 KPPGCSAIEVGGVV 457
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 173/382 (45%), Gaps = 50/382 (13%)
Query: 39 RIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDA 96
+I+ CA + YAR +F++I + + N++ GY R + LF Q+ L
Sbjct: 15 KIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMMLQG 73
Query: 97 M-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
+ P+ FTFP + KSC L EG++LHC K GF ++ ++ L+ +YS + +A
Sbjct: 74 LDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSAR 130
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-ELAPERDVILWNTIVSGYIDVRNMI 214
KVF +M ++VV W +MI Y A LF + ++ WN +++G+++ +
Sbjct: 131 KVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYE 190
Query: 215 EARKLFDQMP----KKDVISWNTMLSG--------------------------------- 237
EA LF++M K D ++ ++L
Sbjct: 191 EALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALV 250
Query: 238 --YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
YA G +E R+F+EMPE++V +W LI G A G + L+ F M V P+
Sbjct: 251 DMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM-QMSEVKPDA 309
Query: 296 ATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T V VL+AC+ G ++ + + G Q ++ ++DM + G I A D+
Sbjct: 310 ITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQ 369
Query: 355 SMD-TKDLITWNTIISGLAMHG 375
+M D ++S +HG
Sbjct: 370 NMPMAPDYFVLVGLLSACRIHG 391
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 48/283 (16%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS-------- 67
K LH T++ G YI ++ + + ARK+FDK+ +++VVS
Sbjct: 95 KQLHCHSTKL---GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAY 151
Query: 68 ------------------------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF 103
WN M NG+ ++ + + LF +M+ + T
Sbjct: 152 AQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTM 211
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
+L +C + AL G+ LH + K ++ +GTAL+++Y+ +IE+A +VF EM E
Sbjct: 212 ASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE 271
Query: 164 RNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRNMIEAR 217
++V+ WT++I G CG + A LF E+ P D I + +++ + E
Sbjct: 272 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKP--DAITFVGVLAACSHAGLVNEGI 329
Query: 218 KLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMP 255
F+ MP K + + M+ G + E + L + MP
Sbjct: 330 AYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 265/528 (50%), Gaps = 65/528 (12%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVSWNAM 71
T L Q +Q++ GL + R+I CA K + YA ++FDKI
Sbjct: 32 TMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPH--------- 82
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
P+ + + + + ++ R ++ +L
Sbjct: 83 --------------------------PDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSV 116
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
N F LI AIE ++ + +
Sbjct: 117 SPNKFTYPPLIRACCIDYAIEEGKQIHAH---------------------------VLKF 149
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
D N ++ Y++ +++ +AR++FD MP++DV+SW ++++GY+ G V++ + +F
Sbjct: 150 GFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVF 209
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E MPERN SWN +I Y + E F RM E V + ++LSAC LGAL
Sbjct: 210 ELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL-DKFVAASMLSACTGLGAL 268
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ KW+H Y E +G + + + +IDMY KCG +E A +VFN + K + +WN +I GL
Sbjct: 269 EQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGL 328
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG+G A+ LF EM+ PDGITF+ +L AC H GLVEEG YFQ M + P
Sbjct: 329 AMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPG 388
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EH+GCMVDLL RAG L EA + MP+ DA + L+G+CR++ N EL E +++
Sbjct: 389 MEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVI 448
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
ELEP N +V+L+N+Y GRW+DVA+++ M D G KK PG S IE
Sbjct: 449 ELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 496
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/539 (33%), Positives = 297/539 (55%), Gaps = 38/539 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++++ G + ++ +I A+ K+FD++ ++N V+WN++ + AQ
Sbjct: 196 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 255
Query: 80 FHRTVVVLFTQMKKLDA--MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+VLF +M++ + P+ FTF +L C +G ++H +++ NI V
Sbjct: 256 HFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 315
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP---- 193
T L+ +YS + A ++F M ERN W SMI GY G+ A LF+
Sbjct: 316 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI 375
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
+ D ++++S + + + + R+L + + + ++ I ++ YA G ++ +
Sbjct: 376 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 435
Query: 250 LFEEM--PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++++ +RN WN ++ GYAN GL E + F ML E + + T+VT+++
Sbjct: 436 VYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEML-ESDIEYDVLTMVTIVNL--- 491
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+ + AL+DMY+KCG I A VF++M+ K++++WN +
Sbjct: 492 ----------------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAM 529
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISG + HG AL L+ EM G P+ +TF+ IL AC+H GLVEEGL F SM DY+
Sbjct: 530 ISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYN 589
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I + EHY CMVDLL RAGRL +A +FV++MPIE + W LLG+CRV+K++++ LA
Sbjct: 590 IEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAA 649
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+RL EL+P+NP +V++SNIY GRWK+V I+ M+ G KK PG S IE+N + +
Sbjct: 650 QRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQI 708
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 278/598 (46%), Gaps = 53/598 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQ---LKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
I TQ++++G Y+ +I+ A+ L + YARK+F+++ ++N+ +WN M YA+
Sbjct: 93 IHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYAR 152
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ + +F +M K+ P+ FTF L+ C + + G+++H ++ GF+ + FV
Sbjct: 153 VDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 212
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------EL 191
G ALI++Y+ E+ KVF EM ERN V W S+I+ G A LF E
Sbjct: 213 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESED 272
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEEC 247
+ D + T+++ + RN + R++ + + K++I ++ Y+ G +
Sbjct: 273 GIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYA 332
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
K +F M ERN +SWN +I GY NG E L FK+M G + P+ ++ ++LS+C
Sbjct: 333 KEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG-IKPDCFSLSSMLSSCVS 391
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT--WN 365
L + +H + N + + L+DMYAKCG ++ A V++ KD T WN
Sbjct: 392 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWN 451
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL------CACTHM----GLVEEG 415
+I++G A G + + F EM + D +T + I+ A M G + +
Sbjct: 452 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKA 511
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA---DAVIWANLLG 472
+ F +M I + M+ ++ G EA+ + MP + + V + +L
Sbjct: 512 RTVFDNMNGK-----NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 473 SCRVYKNVELAELALERLTELEPK-----NPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
+C + L E L T ++ ++ + ++ G GR +D
Sbjct: 567 AC---SHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEF------- 616
Query: 528 GFKKLPGCSSIEVNEVVMLGC-LSRELDRKSIVRAEANMIKLLPQNNHPLTFIVVIFS 584
+K+P + ++ C + +++D + A + +L PQN P + I++
Sbjct: 617 -VEKMPIEPEVSTWGALLGACRVHKDMDMGRL--AAQRLFELDPQNPGPYVIMSNIYA 671
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 192/411 (46%), Gaps = 23/411 (5%)
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA---AY 155
N + +++ C+ N+ + G+ +H ++ NG+ + ++ T ++ LY+ ++ A
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
K+F EM ERN+ W +MI Y D + A +F+ + V N + + V +
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189
Query: 216 ARKLFDQMPKK--------DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+R Q+ K D N ++ YA D E C ++F+EM ERN +WN +I
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249
Query: 268 GYANNGLFFEVLDAFKRML-TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
A G F + L F RM +E + P+ T T+L+ CA + + +H +
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 309
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
N+ V L+ MY++CG + A ++FN M ++ +WN++I G +G AL LF +
Sbjct: 310 TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQ 369
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIEHYGCMVDLLA 443
M+ G PD + +L +C + ++G ++ M+ + Q+ +VD+ A
Sbjct: 370 MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV----VLVDMYA 425
Query: 444 RAGRLAEAVD-FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
+ G + A + + + + + +W ++L Y N L + + E+
Sbjct: 426 KCGSMDYAWKVYDQTIKKDRNTALWNSILAG---YANKGLKKESFNHFLEM 473
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 280/527 (53%), Gaps = 9/527 (1%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
V +GL S ++ ++ + ++ R++F ++ +NVVSW A+ G + +++ +
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
V F++M + + +TF I LK+C AL G E+H +K GF + FV L +Y
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWN 201
+ +E +F +M R+VV WT++I + G A F E DV +
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPER 257
++SG ++ + +L + + + N++++ YA G + +F EM R
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR 382
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
++ SW+ +I GY G E + M EG P + + +VLSAC + L+ K +
Sbjct: 383 DIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPK-PTEFALASVLSACGNMAILEHGKQL 441
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H Y G + V +ALI+MY KCG IE A +F++ + D+++W +I+G A HG
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
+ LF ++ G PD +TFIG+L AC+H GLV+ G YF +M+ Y I P EHYGC
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
M+DLL RAGRL++A ++ MP D V+W+ LL +CRV+ +VE ER+ +LEP
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+ L+NIY G+W++ A I+ M+ G K PG S I+V ++V
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLV 668
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 219/464 (47%), Gaps = 43/464 (9%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCV 111
AR+MFDK++ ++ +SW + +GY ++LF M+ + + F + K+C
Sbjct: 68 ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ + GE LH +K G ++FVG+AL+++Y+ I +VF EM RNVV WT+
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTA 187
Query: 172 MINGYISCG----DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK- 226
+I G + G +V ++ E D + + D + R++ Q KK
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247
Query: 227 -DVISW--NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
DV S+ NT+ + Y G +E LFE+M R+V SW +I G + AF
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
RM E V PN+ T V+S CA L +++ + +H + G ++ V N+++ MYAKC
Sbjct: 308 RM-RESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G + ++ +F+ M +D+++W+TII+G G + A L M+ G P +L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 404 CACTHMGLVEEGL---SYFQSMAMDYSIV---------------------------PQIE 433
AC +M ++E G +Y S+ ++++ + I
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMP---IEADAVIWANLLGSC 474
+ M++ A G E +D +++P + D+V + +L +C
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC 530
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 217/488 (44%), Gaps = 61/488 (12%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q + G + S ++ + T + ++ Y +F+K++ ++VVSW + Q
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V F +M++ D PN +TF V+ C + + GE+LH L+L G A++ V
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL-------A 192
+++ +Y+ + ++ +F EM R++V W+++I GY G + A FEL
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEA---FELLSWMRMEG 414
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQM----PKKDVISWNTMLSGYANNGDVEECK 248
P+ +++S ++ + ++L + + + + +++ Y G +EE
Sbjct: 415 PKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
R+F+ ++ SW +I GYA +G EV+D F+++ G + P+ T + VLSAC+
Sbjct: 475 RIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG-LRPDSVTFIGVLSACSHA 533
Query: 309 GALD--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWN 365
G +D F + + +Y G +ID+ + G + +A + +M +D + W+
Sbjct: 534 GLVDLGFHYFNAMSKKYQISPSKEHYG-CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV------------- 412
T++ +HG +++ + I + CA TH+ L
Sbjct: 593 TLLRACRVHG----------DVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAA 642
Query: 413 -------------EEGLSYFQSMAMDYSIV------PQIEHYGCMVDLLARAGRLAEAVD 453
E G S+ + + ++ V PQ E M+DLLA LA+ V
Sbjct: 643 DIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQ 702
Query: 454 FVKRMPIE 461
+P +
Sbjct: 703 ETGFLPYD 710
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 158/371 (42%), Gaps = 48/371 (12%)
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV-------- 228
+ G + +AR +F+ ++D I W T++SGY++ + EA LF M +
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 229 ------------ISWNTMLSGYA--------------------NNGDVEECKRLFEEMPE 256
+++ +L GYA NG + E +R+F EMP
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RNV SW +I G G E L F M RV + T L ACA GAL++ +
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMW-RSRVEYDSYTFAIALKACADSGALNYGRE 238
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H A G+ + V N L MY KCG +E + +F M +D+++W TII+ L G+
Sbjct: 239 IHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ 298
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
A+ F M+ + P+ TF ++ C ++ +E G ++ + + +
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWG-EQLHALILHLGLAASLSVEN 357
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT--ELE 494
++ + A+ G+L + M D V W+ ++ Y A E L+ +E
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAG---YXQGGHVSEAFELLSWMRME 413
Query: 495 PKNPANFVMLS 505
P F + S
Sbjct: 414 GPKPTEFALAS 424
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 5/288 (1%)
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+ + D+ N L G + +R+F++M +++ SW LI GY N E L F
Sbjct: 44 ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
K M E + + + AC +++ + +H YA G +V VG+AL+DMY K
Sbjct: 104 KNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK 163
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G I VF+ M +++++W II+GL G AL F EM + D TF
Sbjct: 164 NGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223
Query: 403 LCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L AC G + G + Q+M + + + + + + + G+L + ++M +
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR 281
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
D V W ++ + E A A R+ E + +P + + I G
Sbjct: 282 -DVVSWTTIITTLVQMGQEECAVQAFIRMRESDV-SPNEYTFAAVISG 327
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+H Q+ V++ GLE + + +I + + A ++FD + ++VSW AM NGY
Sbjct: 436 EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGY 495
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKNGFRAN 134
A++ + R V+ LF ++ ++ P+ TF VL +C + G + + K +
Sbjct: 496 AEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPS 555
Query: 135 IFVGTALIELY-STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+I+L G+ +A + + R+ VVW++++ GD+ R
Sbjct: 556 KEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGR 608
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 293/536 (54%), Gaps = 39/536 (7%)
Query: 20 QIQTQVVTSGLEKSDYITP-RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ- 77
Q+ + + +G+ SDYI ++ + + A +F+ NVV WN + + Q
Sbjct: 265 QLHSYLFKAGMS-SDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQI 323
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N+ ++ LF QM+ PN FT+P +L++C + GE++H L +K GF ++++V
Sbjct: 324 NDLAKSFE-LFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYV 382
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVSA-RCLFELAP 193
LI++YS +E A +V + E++VV WTSMI GY+ C D ++A + + +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGI 442
Query: 194 ERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
D I + +SG ++ M I AR ++ DV WN +++ YA G + E
Sbjct: 443 WPDNIGLASAISGCAGIKAMRQGLQIHAR-VYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
FEE+ ++ +WNGL+ G+A +GL E L F RM G V N T V+ LSA A L
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANL 560
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+ K +H G+ VGNALI +Y KCG E+A F+ M ++ ++WNTII
Sbjct: 561 AEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+ + HGRG AL F +MK +EGLSYF+SM+ Y I
Sbjct: 621 TSCSQHGRGLEALDFFDQMK------------------------KEGLSYFKSMSDKYGI 656
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
P+ +HY C++D+ RAG+L A FV+ MPI ADA++W LL +C+V+KN+E+ ELA +
Sbjct: 657 RPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAK 716
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ELEP + A++V+LSN Y G+W + +++ MRD G +K PG S IEV VV
Sbjct: 717 HLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVV 772
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 219/467 (46%), Gaps = 25/467 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I + +T GL K + +I ++ + AR++F++++ ++ VSW AM +GYAQN
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ L+ QM + +P + VL SC K +G +H K GF + FVG
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI LY + A +VF +M R+ V + ++I+G+ C A +FE L+P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKR 249
D + +++++ + ++ + +L + K D I ++L Y GDVE
Sbjct: 243 --DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALV 300
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F NV WN ++ + + + F +M T G + PN T +L C G
Sbjct: 301 IFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAG-IRPNQFTYPCILRTCTCTG 359
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+D + +H + G++ ++ V LIDMY+K G +E A V + KD+++W ++I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-----YFQSMAM 424
G H AL+ F EM+ G PD I + C + + +GL Y +
Sbjct: 420 GYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSG 479
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
D SI + +V+L AR GR+ EA + + D + W L+
Sbjct: 480 DVSI------WNALVNLYARCGRIREAFSSFEEIE-HKDEITWNGLV 519
>gi|357167336|ref|XP_003581113.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 687
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 303/561 (54%), Gaps = 38/561 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN--------------- 64
Q+ QVV SG E + + ++ + ++ A +FD + +N
Sbjct: 83 QVHCQVVKSGSENFEVVGASLLDFYSSCFDLSAAHMLFDTLHPRNERLWSPMVVALVRFN 142
Query: 65 -----------------VVSWNAMFNGYAQ--NEFHRTVVVLFTQM-KKLDAMPNCFTFP 104
V +W A+ +GYA+ ++ R + LF +M MPN FTF
Sbjct: 143 LLSDALDLLDRMPAPRDVFAWTAVISGYARGASDCCRKAIGLFVRMLADHGVMPNEFTFD 202
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
VL++CVK+ AL G +H +L++GF + + +AL++LY + A+ A V+ +++
Sbjct: 203 SVLRACVKMGALDFGRSVHGCLLRSGFDTDKLITSALVDLYCSSDAVADALLVYNDLEMP 262
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
+++ ++I G IS A+ +F PE D +N ++ Y + + +++F++MP
Sbjct: 263 SLITSNALIGGLISMHMTDEAKIVFSQMPEHDSSTYNLMIKAYGIEGKLEQCQRMFEKMP 322
Query: 225 KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFK 283
++++++ N+M+S NG +EE +LFE++ ERN +WN +I GY N E L F
Sbjct: 323 RRNIVTLNSMMSVLLQNGKLEEGLKLFEQIKDERNTITWNSMISGYIQNNHSSEALKLFV 382
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
M + + +T T+L AC +G ++ K VH + ++ N VG AL+DMY+KC
Sbjct: 383 TM-RRLSIICSPSTFPTLLHACGTVGTIEQGKMVHAHLCKTPFESNGYVGTALVDMYSKC 441
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G + +A+D F + + ++ +W ++I+GLA +G+ A+ F M P+ ITF+G+L
Sbjct: 442 GCVSDALDAFCCITSPNVASWTSVINGLAHNGQCLKAIVEFGRMLRHRINPNEITFLGLL 501
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
A + GLV +G+ +F SM Y ++P +EHY C VDLL R GR+ EA F+ MP+ AD
Sbjct: 502 MASSRAGLVNKGMRFFHSME-RYGLLPTVEHYTCAVDLLGRNGRIIEAEKFISAMPVPAD 560
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
V W LL +C ++E+ E E+L + K+ + +V +SNIY LG+W+DV +++
Sbjct: 561 GVAWGALLTACWYSMDLEMGEKVAEKLFFMGTKHKSAYVAMSNIYAKLGKWEDVVKVRTR 620
Query: 524 MRDTGFKKLPGCSSIEVNEVV 544
+R KK PGCS I V + V
Sbjct: 621 LRSLDAKKEPGCSWIGVKDTV 641
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 229/519 (44%), Gaps = 77/519 (14%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
+TA AR++FD + + VV+WNAM G+A+ + L +M + P+
Sbjct: 3 LTALLSSGDTAAARRLFDGMRRRTVVTWNAMVAGHARCGSFLDALDLAARMHRSGVSPSE 62
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
TF VL +C + L G ++HC V+K+G
Sbjct: 63 ATFASVLGACARGRRLCVGAQVHCQVVKSG------------------------------ 92
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
E VV S+++ Y SC D+ +A LF+ R+ LW+ +V + + +A L
Sbjct: 93 -SENFEVVGASLLDFYSSCFDLSAAHMLFDTLHPRNERLWSPMVVALVRFNLLSDALDLL 151
Query: 221 DQMP-KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
D+MP +DV +W ++SGYA G + C++ GLF
Sbjct: 152 DRMPAPRDVFAWTAVISGYA-RGASDCCRKAI---------------------GLFV--- 186
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
RML + V PN+ T +VL AC ++GALDF + VH +G+ + + +AL+D+
Sbjct: 187 ----RMLADHGVMPNEFTFDSVLRACVKMGALDFGRSVHGCLLRSGFDTDKLITSALVDL 242
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGL-AMHGRGAGALSLFHEMKNAGEMPDGIT 398
Y + +A+ V+N ++ LIT N +I GL +MH + +F +M D T
Sbjct: 243 YCSSDAVADALLVYNDLEMPSLITSNALIGGLISMHMTDEAKI-VFSQMPEH----DSST 297
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
+ ++ A G +E+ F+ M I M+ +L + G+L E + +++
Sbjct: 298 YNLMIKAYGIEGKLEQCQRMFEKMPRR-----NIVTLNSMMSVLLQNGKLEEGLKLFEQI 352
Query: 459 PIEADAVIWANLL-GSCRVYKNVELAEL--ALERLTELEPKNPANFVMLSNIYGDLGRWK 515
E + + W +++ G + + E +L + RL+ + +P+ F L + G +G +
Sbjct: 353 KDERNTITWNSMISGYIQNNHSSEALKLFVTMRRLSII--CSPSTFPTLLHACGTVGTIE 410
Query: 516 DVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELD 554
+ + T F+ + V+ GC+S LD
Sbjct: 411 QGKMVHAHLCKTPFESNGYVGTALVDMYSKCGCVSDALD 449
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 297/553 (53%), Gaps = 24/553 (4%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN---VVS 67
Q + KH QI TQ++ + ++ +I A+ + A +F IT + +V+
Sbjct: 154 QTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFS-ITHHHFKTIVT 212
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W ++ + H + LF QM+ PN FTF +L + + G++LH L+
Sbjct: 213 WTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIH 272
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF ANIFVGTAL+++Y+ + +A +VF +M ERN+V W SMI G+ A
Sbjct: 273 KHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVG 332
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEA----------RKLFDQMPKKDVISW----NT 233
+F +DV+ T++ + V +++ A R++ + K ++ N+
Sbjct: 333 VF-----KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
++ Y +E +LF+ + +R+V +WN L+ G+ N F E + F M EG + P
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG-ILP 446
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
++A+ TVL + A L AL +H GY N+C+ +LI MYAKCG + +A VF
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 506
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
++ ++I+W +IS +HG + LF M + G P +TF+ +L AC+H G VE
Sbjct: 507 EGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 566
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
EGL++F SM + + P EHY CMVDLL RAG L EA F++ MP++ +W LLG+
Sbjct: 567 EGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 626
Query: 474 CRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
CR Y N+++ A ERL E+EP NP N+V+L+N+ GR ++ ++ M G +K P
Sbjct: 627 CRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEP 686
Query: 534 GCSSIEVNEVVML 546
GCS I+V + +
Sbjct: 687 GCSWIDVKNMTFV 699
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 209/460 (45%), Gaps = 48/460 (10%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE-- 163
+L + ++ +L+ ++H ++ N + + F+ LI LY+ + A +F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKL 219
+ +V WTS+I + A LF P + +++I+S ++ ++L
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 220 FDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
+ K ++ ++ YA D+ R+F++MPERN+ SWN +I G+ +N L+
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNA 335
+ FK +L E V PN+ ++ +VLSACA +G L+F + VH G V N+
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387
Query: 336 LIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
L+DMY KC + V +F + +D++TWN ++ G + + A + F M+ G +PD
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPD 447
Query: 396 GITFIGILCACTHMGLVEEG---------LSYFQSMAMDYSIVPQIEHYGCMVD------ 440
+F +L + + + +G L Y ++M + S++ G +VD
Sbjct: 448 EASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFE 507
Query: 441 ------------------LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE- 481
L A ++ E + + IE V + +L +C VE
Sbjct: 508 GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 567
Query: 482 -LAEL-ALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
LA +++++ ++ P P ++ + ++ G G W D A+
Sbjct: 568 GLAHFNSMKKIHDMNP-GPEHYACMVDLLGRAG-WLDEAK 605
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 284/514 (55%), Gaps = 13/514 (2%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ A+ + ARK+F++I +NVVSW +M +G QN F ++LF +M++
Sbjct: 168 FVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQD 227
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+ P+ +T V+ +C + L +G +H V+K G +N F+ AL+++Y +E A
Sbjct: 228 NVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDA 287
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYI 208
VF E+ ++V+WT+MI GY G+ + A LF + P I T++S
Sbjct: 288 QCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTI--ATVLSASA 345
Query: 209 DVRNMIEARKLFDQMPKKDVISW----NTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+R++ R + K ++ + N ++ YA V E R+F + ++V +WN
Sbjct: 346 QLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNS 405
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
++ GYA N + + L FK+M +G P+ ++V LSA LG L K H YA +
Sbjct: 406 MLSGYAENNMCNDALMLFKQMSLKGPS-PDAISVVHALSASVCLGDLLIGKSFHGYAVKH 464
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ N+ V AL+++Y KCG + +A VF+ M+ ++ +TW +I G M G AG++ LF
Sbjct: 465 AFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLF 524
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
EM G P+ + F IL C+H G+V YF SMA ++I P ++HY CMVD+LAR
Sbjct: 525 GEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLAR 584
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG L EA++F+ MP++AD +W L C ++ ++ E A++R+ L P+ P +V++
Sbjct: 585 AGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLI 644
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
SN+Y G W+ I+ M++ G KLPG SSI
Sbjct: 645 SNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 214/450 (47%), Gaps = 25/450 (5%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
++++ A L + AR +FD + S+ M Q E H V L M++ P
Sbjct: 69 KLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCP 128
Query: 99 NC---FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
F + LK+C++ G LHC +K G A+ FV +L+++Y+ +E A
Sbjct: 129 EAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECAR 187
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYID 209
KVF + RNVV WTSM++G + G LF + P I T+++
Sbjct: 188 KVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTI--ATVITACSA 245
Query: 210 VRNMIEARKLFDQMPKKDVISWNTMLSG-----YANNGDVEECKRLFEEMPERNVFSWNG 264
+ + + R + + K+ ++S N+ +S Y G++E+ + +F+E+ ++ W
Sbjct: 246 LIGLHQGRWMHGSVIKQGLMS-NSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTT 304
Query: 265 LIGGYANNGLFFEVLDAFKRMLTE--GRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
+I GY NG LDA + L + + PN TI TVLSA A+L L + +H A
Sbjct: 305 MIVGYTQNG---NPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAV 361
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
G V NAL+DMYAKC + A +F S+ KD++ WN+++SG A + AL
Sbjct: 362 KLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALM 421
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
LF +M G PD I+ + L A +G + G S F A+ ++ + I +++L
Sbjct: 422 LFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKS-FHGYAVKHAFLSNIYVSTALLNLY 480
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ G L A M + ++V W ++G
Sbjct: 481 NKCGDLPSARRVFDEMN-DRNSVTWCAMIG 509
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 177/372 (47%), Gaps = 14/372 (3%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ + V+ GL + +I+ ++ + ++ A+ +FD+++ ++V W M G
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVG 308
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y QN + LF K + +PN T VL + ++ L G +H + +K G
Sbjct: 309 YTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEY 368
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL--- 191
V AL+++Y+ +A+ A ++FG + ++VV W SM++GY A LF+
Sbjct: 369 TVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSL 428
Query: 192 -APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEE 246
P D I +S + + +++ + K +S +L+ Y GD+
Sbjct: 429 KGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPS 488
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+R+F+EM +RN +W +IGGY G +D F ML +G V PND ++LS C+
Sbjct: 489 ARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDG-VHPNDVAFTSILSTCS 547
Query: 307 RLGALDFSK-WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITW 364
G + +K + A++ ++ ++D+ A+ G +E A++ ++M + D W
Sbjct: 548 HTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVW 607
Query: 365 NTIISGLAMHGR 376
+ G +H R
Sbjct: 608 GAFLHGCELHSR 619
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 13/293 (4%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ A L + +H I ++ GL + + ++ A+ + ++ A ++F I+++
Sbjct: 342 SASAQLRDLSLGRSIHGIAVKL---GLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNK 398
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VV+WN+M +GYA+N ++LF QM P+ + L + V + L G+ H
Sbjct: 399 DVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFH 458
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K+ F +NI+V TAL+ LY+ + +A +VF EM++RN V W +MI GY GD
Sbjct: 459 GYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSA 518
Query: 184 SARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTM 234
+ LF + V + + +I+S + A++ FD M + I+ + M
Sbjct: 519 GSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACM 578
Query: 235 LSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
+ A G++EE + MP + + W + G + +A KRM+
Sbjct: 579 VDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMM 631
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 291/554 (52%), Gaps = 19/554 (3%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
MK A +Q T + L + ++ S L ++ +I A L +++A +F
Sbjct: 3 MKANCIALIKQCVTLEALKSLHASILKSHLHP--HLCTSLIAQYASLGSISHAYALFSTS 60
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
NV WN + ++ R + L+++M +L FTFP +LK+C + G
Sbjct: 61 HSSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGA 120
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
H V+ G+ +++FV +L+ +Y + + +VF M ERNVV W+SM+ Y G
Sbjct: 121 RAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNG 180
Query: 181 DIVSARCLF------ELAPERDVILWNTIVSGYIDVRNMIEA----RKLFDQMPKKDVIS 230
LF +AP R +IV+ + EA R + D D
Sbjct: 181 RYEEGLLLFWRMLNEGIAPNR-----GSIVNAMACIHREHEADDFCRVVIDNGLDSDQSV 235
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
N + YA G ++ +R F + ++++ +W +I Y L L+ FK+M G
Sbjct: 236 QNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLG- 294
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ P+ T+++++ A + L + +++VH + ++ ++ + A+ID+Y KCG +E A
Sbjct: 295 IVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYAR 354
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG 410
F+ M ++LI+W+T+ISG MHG G AL LF +MK A PD I F+ +L AC+H G
Sbjct: 355 KCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQMK-ASIKPDHIAFVMVLSACSHGG 413
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
L+ EG F++M D+ + P+ EHY CMVDLL RAGRL+EA F++RMPI DA +W L
Sbjct: 414 LIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGAL 473
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
LG+CR++ N+E AE A L L+ +NP +++LSNIY G+ K+ I+ M+ G +
Sbjct: 474 LGACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVR 533
Query: 531 KLPGCSSIEVNEVV 544
K G + IE+ V
Sbjct: 534 KTVGHTIIEIKNKV 547
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 291/528 (55%), Gaps = 28/528 (5%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
+ T I + CA + +AR +FD++ D++VV+W AM +GYA N H + LF +M
Sbjct: 5 HATTLIKSLCAG-GALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAA 63
Query: 95 DAMPNCFTFPIVLKSCV--KINALREGEELHCLVLKNGFRANIFVGTALIELYST---GK 149
PN FT VL +C + E LH + ++ G +V ALIE Y++ G
Sbjct: 64 GVGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGV 123
Query: 150 AIEAAYKVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLF--------ELAPERDVILW 200
+E + K+F + R WTSM+ GY G + LF EL+P I
Sbjct: 124 GVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIAL 183
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ S + N+ ++L +K ++ N+++ Y + ++ + +RLF+E+PE
Sbjct: 184 HACAS----IANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPE 239
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
RN+ +WN +I Y+ + ++L E + PN T+ ++ SACA L +L F +
Sbjct: 240 RNLVTWNTMIAWYSQCNHLMAL-----QLLREMNLQPNCFTLTSITSACAGLASLRFGQQ 294
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH A Y ++ + NAL+DMY+KCG I NA +FN MD KD ++W ++I+G M+G
Sbjct: 295 VHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGY 354
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
++ LF M +AG PD + F+G++CAC H GLV+EG ++F+SM +Y++ P E YG
Sbjct: 355 ANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYG 414
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
C+ +LLARAGRL EA D + RMP D +W LLG+C+++KNVEL LA ++ E+ P
Sbjct: 415 CVTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPD 474
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+L+NIY +W + A + +R G +K G S I+V + +
Sbjct: 475 RAKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKI 522
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 287/530 (54%), Gaps = 41/530 (7%)
Query: 52 YARKMFDKI-TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
YA +F I + + +N +++ R ++ + +++ + + F+F +LK+
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
K++AL EG ELH + K + FV T +++Y++ I A VF EM R+VV W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 171 SMINGYISCG-------------------------DIVSA----------RCLFELAPER 195
+MI Y G +IVSA R ++E E
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 196 DVI----LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
DV L +V+ Y M AR+ F +M +++ M+SGY+ G +++ + +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
++ ++++ W +I Y + E L F+ M G + P+ ++ +V+SACA LG L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGIL 360
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D +KWVH NG + + + NALI+MYAKCG ++ DVF M +++++W+++I+ L
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL 420
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+MHG + ALSLF MK P+ +TF+G+L C+H GLVEEG F SM +Y+I P+
Sbjct: 421 SMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK 480
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGCMVDL RA L EA++ ++ MP+ ++ VIW +L+ +CR++ +EL + A +R+
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ELEP + V++SNIY RW+DV I+ M + K G S I+ N
Sbjct: 541 ELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQN 590
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 185/373 (49%), Gaps = 44/373 (11%)
Query: 45 AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
A ++ YAR +FD+++ ++VV+WN M Y + LF +MK + MP+
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
++ +C + +R ++ +++N R + + TAL+ +Y+ ++ A + F +M R
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
N+ V T+M++GY CG + A+ +F+ ++D++ W T++S Y++ EA ++F++M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 225 ----KKDVIS------------------W-----------------NTMLSGYANNGDVE 245
K DV+S W N +++ YA G ++
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ +FE+MP RNV SW+ +I + +G + L F RM E V PN+ T V VL C
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN-VEPNEVTFVGVLYGC 455
Query: 306 ARLGALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLI 362
+ G ++ K + + EYN G ++D++ + ++ A++V SM +++
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYG-CMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 363 TWNTIISGLAMHG 375
W +++S +HG
Sbjct: 515 IWGSLMSACRIHG 527
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 117/254 (46%), Gaps = 20/254 (7%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
+++ +++ ++ ++ A+ +FD+ +++V W M + Y ++++ + + +F +M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
P+ + V+ +C + L + + +H + NG + + + ALI +Y+ ++A
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVS 205
VF +M RNVV W+SMIN G+ A LF + +V +L+ S
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 206 GYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNV 259
G ++ E +K+F M + I+ + M+ + + E + E MP NV
Sbjct: 459 GLVE-----EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 260 FSWNGLIGGYANNG 273
W L+ +G
Sbjct: 514 VIWGSLMSACRIHG 527
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + + +GLE I +I A+ + R +F+K+ +NVVSW++M N + +
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNGFRANIFVGT 139
+ LF +MK+ + PN TF VL C + EG+++ + + +
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELAP 193
+++L+ + A +V M NVV+W S+ I+G + G + R L EL P
Sbjct: 486 CMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL-ELEP 544
Query: 194 ERD--VILWNTIVS---GYIDVRNM---IEARKLFDQ 222
+ D ++L + I + + DVRN+ +E + +F +
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 285/528 (53%), Gaps = 29/528 (5%)
Query: 36 ITPRIITAC--AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK 93
I ++I C + + A +F +I +V WN+M G+ N R ++L+ Q+ +
Sbjct: 27 ILSKLIDFCVDSXFGDINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIE 86
Query: 94 LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
P+ FTFP VLK+C I G+ +HC ++K+GF A+ + T L+ +Y + +++
Sbjct: 87 NGYSPDHFTFPFVLKACCAIADQDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKS 146
Query: 154 AYKVFGEMDERNVVVWTSMINGYIS----------------CG----DIVSARCLFELAP 193
KVF + NVV WT +I GY++ CG +I L A
Sbjct: 147 GLKVFDNIPIWNVVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCAR 206
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
RD ++T + +R F ++I +L YA G + + LF +
Sbjct: 207 SRD---FDTGQWVHQHIRK--AGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNK 261
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
MP+RN+ SWN +I Y E LD F M T G ++P+ AT ++VLS CA L AL
Sbjct: 262 MPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSG-IYPDKATFLSVLSVCAHLCALAL 320
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ VH Y G ++ + AL+DMYAK G + +A +F+S+ +D++ W ++I+GLAM
Sbjct: 321 GQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAM 380
Query: 374 HGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG G AL +F M +++ +PD IT+IG+L AC+H+GLVEE +F+ M YSIVP
Sbjct: 381 HGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGR 440
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCMVDLL+R+G EA ++ M I+ + I LL C++++N+ +A ERLTE
Sbjct: 441 EHYGCMVDLLSRSGHFGEAERLMETMAIQPNISIXGALLYGCQIHENLXVANQVKERLTE 500
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
LE V+LSNIY GRW+DV + M+ K+ G SS+E+
Sbjct: 501 LESCQSGAHVLLSNIYAKAGRWEDVNGTRKVMKHKRITKIIGHSSVEM 548
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 19/312 (6%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I +V SG E Y ++ M K+FD I NVV+W + GY N
Sbjct: 115 IHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQ 174
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-------RA 133
+ +F M PN T L C + G+ +H + K G+ +
Sbjct: 175 PYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNS 234
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---- 189
NI + TA++E+Y+ + + A +F +M +RN+V W SMIN Y A LF
Sbjct: 235 NIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMW 294
Query: 190 --ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGD 243
+ P++ L +++S + + + + + K D+ +L YA G
Sbjct: 295 TSGIYPDKATFL--SVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGG 352
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ +++F + +R+V W +I G A +G E L F+ M + + P+ T + VL
Sbjct: 353 LGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLF 412
Query: 304 ACARLGALDFSK 315
AC+ +G ++ +K
Sbjct: 413 ACSHVGLVEEAK 424
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 145/327 (44%), Gaps = 24/327 (7%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+I NTI+S ++M E +KL + K + G NN D+ +F ++
Sbjct: 1 MIHQNTILSLLARCKSMRELKKLRGLILSKLIDFCVDSXFGDINNADL-----VFRQIDA 55
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
+V+ WN +I G+ NN + +++++ G P+ T VL AC + D K
Sbjct: 56 PSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYS-PDHFTFPFVLKACCAIADQDCGKC 114
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H +G++ + L+ MY C +++ + VF+++ +++ W +I+G + +
Sbjct: 115 IHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQ 174
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACT-----------HMGLVEEGLSYFQSMAMD 425
AL +F +M + G P+ IT + L C H + + G F S +
Sbjct: 175 PYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNS 234
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY-KNVELAE 484
I+ ++++ A+ G A D +MP + + V W +++ + Y ++ E +
Sbjct: 235 NIILAT-----AILEMYAKCGSFKIARDLFNKMP-QRNIVSWNSMINAYNQYERHKEALD 288
Query: 485 LALERLTELEPKNPANFVMLSNIYGDL 511
L + T + A F+ + ++ L
Sbjct: 289 LFFDMWTSGIYPDKATFLSVLSVCAHL 315
>gi|242048094|ref|XP_002461793.1| hypothetical protein SORBIDRAFT_02g008110 [Sorghum bicolor]
gi|241925170|gb|EER98314.1| hypothetical protein SORBIDRAFT_02g008110 [Sorghum bicolor]
Length = 601
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 262/488 (53%), Gaps = 70/488 (14%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY---ST 147
M+ PN FTF +L++C + L +H +++ GF +++ V AL+ +Y
Sbjct: 103 MRAAGVSPNGFTFTFLLRACESLRRLPLCRCVHGQIVRCGFGSDVVVQNALLNVYYKCGD 162
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGY 207
+ A KVF M +R+VV W S++ Y+S GD A LFE PER+V+ WNTIV+ +
Sbjct: 163 PGDVGVARKVFDGMADRDVVSWNSIVGVYMSSGDTTGAMELFEAIPERNVVSWNTIVAAF 222
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE--------------- 252
+M+ A +FD+MP +D ISWN M+SGYA +G+VE + LF+
Sbjct: 223 TRAGDMVSAHAVFDRMPIRDAISWNLMISGYAGSGNVESARTLFDLMDRKDVVSWTAMVS 282
Query: 253 ----------------EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
+MP++N+ SWN +I GY +N + E L F++M+ EGR P++A
Sbjct: 283 AYAKIGDLDSARVLFDQMPDKNLVSWNAMITGYNHNSRYDEALRTFQQMMLEGRFMPDEA 342
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+V+V+SACA+LG++++ W+ Y + V +GNALIDM+AKCG + A F+ M
Sbjct: 343 TLVSVVSACAQLGSVEYCNWISSYISKSNTHITVALGNALIDMFAKCGDVGRARLAFDKM 402
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
T+ +ITW T+ISG A +G+ AL ++ ++ G D FI L AC H GL++EG
Sbjct: 403 KTRCVITWTTMISGFAYNGQFREALLIYSDICREGVTLDDTIFIAALAACAHGGLLQEGW 462
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
S F+ M Y IVP++EHYGC+VDLL RA
Sbjct: 463 SIFKQMVEHYGIVPRMEHYGCIVDLLGRA------------------------------- 491
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
EL E R+ E+EP N + V++SN GRW V + +RD G +K PG S
Sbjct: 492 ----ELTEYVSARVVEIEPFNSSYQVLVSNCSALEGRWGSVMDARKTLRDRGVEKTPGSS 547
Query: 537 SIEV-NEV 543
I+V NEV
Sbjct: 548 LIQVGNEV 555
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 30 LEKSDYIT-PRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
+++ D ++ +++A A++ + AR +FD++ D+N+VSWNAM GY N + + F
Sbjct: 269 MDRKDVVSWTAMVSAYAKIGDLDSARVLFDQMPDKNLVSWNAMITGYNHNSRYDEALRTF 328
Query: 89 TQMK-KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
QM + MP+ T V+ +C ++ ++ + + K+ + +G ALI++++
Sbjct: 329 QQMMLEGRFMPDEATLVSVVSACAQLGSVEYCNWISSYISKSNTHITVALGNALIDMFAK 388
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
+ A F +M R V+ WT+MI+G+ G A ++ V L +TI
Sbjct: 389 CGDVGRARLAFDKMKTRCVITWTTMISGFAYNGQFREALLIYSDICREGVTLDDTI 444
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 154/385 (40%), Gaps = 73/385 (18%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
I+ A + M A +FD++ ++ +SWN M +GYA + + LF M
Sbjct: 218 IVAAFTRAGDMVSAHAVFDRMPIRDAISWNLMISGYAGSGNVESARTLFDLMD------- 270
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
R ++ TA++ Y+ +++A +F
Sbjct: 271 --------------------------------RKDVVSWTAMVSAYAKIGDLDSARVLFD 298
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFE-------LAPERDVILWNTIVSGYIDVRN 212
+M ++N+V W +MI GY A F+ P+ ++ ++VS + +
Sbjct: 299 QMPDKNLVSWNAMITGYNHNSRYDEALRTFQQMMLEGRFMPDEATLV--SVVSACAQLGS 356
Query: 213 MIEARKLFDQMPKKD----VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ + + K + V N ++ +A GDV + F++M R V +W +I G
Sbjct: 357 VEYCNWISSYISKSNTHITVALGNALIDMFAKCGDVGRARLAFDKMKTRCVITWTTMISG 416
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEY 323
+A NG F E L + + EG V +D + L+ACA G L F + V Y
Sbjct: 417 FAYNGQFREALLIYSDICREG-VTLDDTIFIAALAACAHGGLLQEGWSIFKQMVEHYGIV 475
Query: 324 NGYQGNVCV----GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL-AMHGRGA 378
+ C+ G A + Y ++E ++ FNS ++ ++S A+ GR
Sbjct: 476 PRMEHYGCIVDLLGRAELTEYVSARVVE--IEPFNS-------SYQVLVSNCSALEGRWG 526
Query: 379 GALSLFHEMKNAG-EMPDGITFIGI 402
+ +++ G E G + I +
Sbjct: 527 SVMDARKTLRDRGVEKTPGSSLIQV 551
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 298/531 (56%), Gaps = 15/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G E + +IT + ++ AR +FDK+ ++ +SWNAM +GY +N
Sbjct: 219 EIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENG 278
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF+ M++L P+ T V +C ++ R G +H V+K+ F +I +
Sbjct: 279 GGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNN 338
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI++YS+ +E A VF M+ ++VV WT+MI +S A +++ E + IL
Sbjct: 339 SLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMM-ELEGIL 397
Query: 200 WN--TIVS--------GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ T+VS G++D+ + + + ++S N+++ Y+ V+
Sbjct: 398 PDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVS-NSLIDMYSKCKCVDNALE 456
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F + +NV SW LI G N FE L F++M + PN T+++VLSACAR+G
Sbjct: 457 VFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK--PNSVTLISVLSACARIG 514
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL K +H +A G + + NA++DMY +CG A++ FNS KD+ WN +++
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLT 573
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A G+ A+ LF +M PD ITFI +LCAC+ G+V EGL YF M Y++
Sbjct: 574 GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY C+VD+L RAG+L +A DF++ MPI DA IW LL +CR+++NVEL E+A +R
Sbjct: 634 PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKR 693
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ E + K+ +++L N+Y G W V++++ MR+ G PGCS +E+
Sbjct: 694 VFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEI 744
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 238/447 (53%), Gaps = 13/447 (2%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+F K+++++V SWN + GYA+ + L+ +M + PN +TFP VLK+C ++
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
+ G+E+H V++ GF +++ VG ALI +Y I A +F +M +R+ + W +MI+G
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----D 227
Y G + LF EL+ + D+I T+ S + N R + + K D
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+ N+++ Y++ G +EE + +F M ++V SW +I ++ L F+ ++ +K M
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG + P++ T+V+VLSACA +G LD +H A G +V V N+LIDMY+KC ++
Sbjct: 394 EG-ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVD 452
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
NA++VF ++ K++++W ++I GL ++ R AL F +MK + + P+ +T I +L AC
Sbjct: 453 NALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK-PNSVTLISVLSACA 511
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+G + G + A+ + ++D+ R GR A++ + D W
Sbjct: 512 RIGALMRG-KEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ--KKDVTAW 568
Query: 468 ANLLGSCRVYKNVELAELALERLTELE 494
LL +LA +++ ELE
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +LS + G++ + +F +M ER+VFSWN L+GGYA G F E L+ + RML +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW-AEI 194
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
PN T +VL CA + + K +H + G++ +V VGNALI MY KCG I NA
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M +D I+WN +ISG +G G L LF M+ PD IT + AC +
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G + I ++ + + GRL EA RM D V W ++
Sbjct: 315 ERLGRG-VHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMI 372
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
S +K + + ++ ELE P ++S
Sbjct: 373 ASLVSHK-LPFKAVETYKMMELEGILPDEITLVS 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 43/351 (12%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
T + E L+ + + VV S + +I + L ++ A +F ++ +
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVSW AM ++ V + M+ +P+ T VL +C I L G LH
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLH 423
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ +K G +++ V +LI++YS K ++ A +VF + +NVV WTS+I G
Sbjct: 424 EIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSF 483
Query: 184 SARCLFELAPER--------------------------------------DVILWNTIVS 205
A F E D L N I+
Sbjct: 484 EALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILD 543
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV----FS 261
Y+ + A F+ KKDV +WN +L+GYA G + LF++M E + +
Sbjct: 544 MYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEIT 602
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ L+ + +G+ E L+ F M + + PN V+ R G LD
Sbjct: 603 FISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLD 653
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 281 AFKRM--LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV--GNAL 336
A KR+ + E R+ + + +L C A D + VY + + +CV GNAL
Sbjct: 81 AMKRLESMLELRIEVEEDAYIALLRLCEWRRAPD--EGSRVYELVSSSKSCLCVRLGNAL 138
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+ M+ + G + +A VF M +D+ +WN ++ G A G AL+L+H M A P+
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
TF +L C + + G + + + ++ ++ + + G ++ A
Sbjct: 199 YTFPSVLKTCAGVSDIARG-KEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257
Query: 457 RMPIEADAVIW 467
+MP + D + W
Sbjct: 258 KMP-KRDRISW 267
>gi|354805142|gb|AER41563.1| CRR4 [Oryza australiensis]
Length = 599
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 272/508 (53%), Gaps = 71/508 (13%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY---STGKAIEAA 154
PN FTF +L++C + R +H +++ GF ++FV AL+++Y + AA
Sbjct: 107 PNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGGDVFVQNALMDVYYRCGGAGGVGAA 166
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMI 214
+VF +M E++VV W S++ Y+S GD A LFE PER+V+ WNT+V+G+ +M+
Sbjct: 167 RQVFDQMVEKDVVSWNSIVGVYMSSGDATGAMGLFEAMPERNVVSWNTVVAGFARAGDMV 226
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVE----------------------------- 245
AR +FD+MP ++ +SWN M+SGYA +GDVE
Sbjct: 227 TARTVFDRMPSRNAVSWNLMISGYATSGDVEAAHSVFDRMDQKDVVSWTAMVSAYAKIGD 286
Query: 246 --ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
K+LF+ MP +N+ SWN +I GY +N + E L F+ M+ EGR P++AT+V+V+S
Sbjct: 287 LDNAKQLFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVS 346
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
ACA+LG++++ W+ + + V +GNALIDM+AKCG + A F M T+ +IT
Sbjct: 347 ACAQLGSVEYCNWIGSFIGKSKIHLTVALGNALIDMFAKCGDVGRAQSFFYEMKTRCIIT 406
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W T+ISG A +G AL +++ M G D FI L AC H GL++EG S F M
Sbjct: 407 WTTMISGFAFNGFCREALLVYNNMCREGIELDDTVFIAALAACAHGGLLQEGWSIFNEMV 466
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
Y+I P++EHYGCMVDLL RA EL
Sbjct: 467 KQYNIQPRMEHYGCMVDLLGRA-----------------------------------ELI 491
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
E ++T+LEP NP+ V++SN GRW V + +MR+ G +K+PG S I+V
Sbjct: 492 EYVSNKITKLEPFNPSYQVLVSNCSALEGRWDGVIGARTSMRNWGIEKVPGSSLIQVGSE 551
Query: 544 V--MLGCLSRELDRKSIVRAEANMIKLL 569
V L +R +K I ++ L+
Sbjct: 552 VHEFLAKDTRHERKKEIYETVDGLMALM 579
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-- 97
+++A A++ + A+++FD + +N+VSWNAM GY N + + F Q+ L+
Sbjct: 277 MVSAYAKIGDLDNAKQLFDHMPVKNLVSWNAMITGYNHNSRYDEALRTF-QLMMLEGRFR 335
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P+ T V+ +C ++ ++ + + K+ + +G ALI++++ + A
Sbjct: 336 PDEATLVSVVSACAQLGSVEYCNWIGSFIGKSKIHLTVALGNALIDMFAKCGDVGRAQSF 395
Query: 158 FGEMDERNVVVWTSMINGY 176
F EM R ++ WT+MI+G+
Sbjct: 396 FYEMKTRCIITWTTMISGF 414
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 86/225 (38%), Gaps = 47/225 (20%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
V PN T +L ACA LG VH G+ G+V V NAL+D+Y +CG
Sbjct: 105 VPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGGDVFVQNALMDVYYRCGGAGGVG 164
Query: 351 ---DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
VF+ M KD+++WN+I+ G GA+ LF M
Sbjct: 165 AARQVFDQMVEKDVVSWNSIVGVYMSSGDATGAMGLFEAMPER----------------- 207
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ + +V ARAG + A RMP +AV W
Sbjct: 208 -----------------------NVVSWNTVVAGFARAGDMVTARTVFDRMP-SRNAVSW 243
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
++ +VE A +R+ + K+ ++ + + Y +G
Sbjct: 244 NLMISGYATSGDVEAAHSVFDRMDQ---KDVVSWTAMVSAYAKIG 285
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 298/531 (56%), Gaps = 15/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G E + +IT + ++ AR +FDK+ ++ +SWNAM +GY +N
Sbjct: 219 EIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENG 278
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF+ M++L P+ T V +C ++ R G +H V+K+ F +I +
Sbjct: 279 GGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNN 338
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+LI++YS+ +E A VF M+ ++VV WT+MI +S A +++ E + IL
Sbjct: 339 SLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMM-ELEGIL 397
Query: 200 WN--TIVS--------GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ T+VS G++D+ + + + ++S N+++ Y+ V+
Sbjct: 398 PDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVS-NSLIDMYSKCKCVDNALE 456
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F + +NV SW LI G N FE L F++M + PN T+++VLSACAR+G
Sbjct: 457 VFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK--PNSVTLISVLSACARIG 514
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL K +H +A G + + NA++DMY +CG A++ FNS KD+ WN +++
Sbjct: 515 ALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLT 573
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G A G+ A+ LF +M PD ITFI +LCAC+ G+V EGL YF M Y++
Sbjct: 574 GYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY C+VD+L RAG+L +A DF++ MPI DA IW LL +CR+++NVEL E+A +R
Sbjct: 634 PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKR 693
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ E + K+ +++L N+Y G W V++++ MR+ G PGCS +E+
Sbjct: 694 VFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEI 744
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 238/447 (53%), Gaps = 13/447 (2%)
Query: 56 MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
+F K+++++V SWN + GYA+ + L+ +M + PN +TFP VLK+C ++
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
+ G+E+H V++ GF +++ VG ALI +Y I A +F +M +R+ + W +MI+G
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273
Query: 176 YISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----D 227
Y G + LF EL+ + D+I T+ S + N R + + K D
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+ N+++ Y++ G +EE + +F M ++V SW +I ++ L F+ ++ +K M
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG + P++ T+V+VLSACA +G LD +H A G +V V N+LIDMY+KC ++
Sbjct: 394 EG-ILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVD 452
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT 407
NA++VF ++ K++++W ++I GL ++ R AL F +MK + + P+ +T I +L AC
Sbjct: 453 NALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK-PNSVTLISVLSACA 511
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+G + G + A+ + ++D+ R GR A++ + D W
Sbjct: 512 RIGALMRG-KEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ--KKDVTAW 568
Query: 468 ANLLGSCRVYKNVELAELALERLTELE 494
LL +LA +++ ELE
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N +LS + G++ + +F +M ER+VFSWN L+GGYA G F E L+ + RML +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW-AEI 194
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
PN T +VL CA + + K +H + G++ +V VGNALI MY KCG I NA
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M +D I+WN +ISG +G G L LF M+ PD IT + AC +
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G + I ++ + + GRL EA RM D V W ++
Sbjct: 315 ERLGRG-VHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMI 372
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
S +K + + ++ ELE P ++S
Sbjct: 373 ASLVSHK-LPFKAVETYKMMELEGILPDEITLVS 405
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 43/351 (12%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
T + E L+ + + VV S + +I + L ++ A +F ++ +
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+VVSW AM ++ V + M+ +P+ T VL +C I L G LH
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLH 423
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ +K G +++ V +LI++YS K ++ A +VF + +NVV WTS+I G
Sbjct: 424 EIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSF 483
Query: 184 SARCLFELAPER--------------------------------------DVILWNTIVS 205
A F E D L N I+
Sbjct: 484 EALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILD 543
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV----FS 261
Y+ + A F+ KKDV +WN +L+GYA G + LF++M E + +
Sbjct: 544 MYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEIT 602
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ L+ + +G+ E L+ F M + + PN V+ R G LD
Sbjct: 603 FISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLD 653
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 281 AFKRM--LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV--GNAL 336
A KR+ + E R+ + + +L C A D + VY + + +CV GNAL
Sbjct: 81 AMKRLESMLELRIEVEEDAYIALLRLCEWRRAPD--EGSRVYELVSSSKSCLCVRLGNAL 138
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+ M+ + G + +A VF M +D+ +WN ++ G A G AL+L+H M A P+
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
TF +L C + + G + + + ++ ++ + + G ++ A
Sbjct: 199 YTFPSVLKTCAGVSDIARG-KEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257
Query: 457 RMPIEADAVIW 467
+MP + D + W
Sbjct: 258 KMP-KRDRISW 267
>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 664
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 291/529 (55%), Gaps = 43/529 (8%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H H ++ V++S + ++++ + LK Y+ +F ++N +NA+ G
Sbjct: 49 HAHILRRGVLSS------RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVFNALIRGLT 102
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
+N V F M L P+ TFP VLKS K+ G LH LKN + F
Sbjct: 103 ENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSF 162
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER- 195
V +L+++Y+ + A++VF E P+R
Sbjct: 163 VRVSLVDMYAKTGQLNHAFQVF-------------------------------EETPDRI 191
Query: 196 ---DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
++LWN +V+GY ++M A LF MP+++ SW+T++ GY +NG++ K+LFE
Sbjct: 192 KKESILLWNVLVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVDNGELNRAKQLFE 251
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
MPE+NV SW LI G++ G + + + ML +G + PN+ T+ VLSAC++ GAL
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG-LKPNEYTVAAVLSACSKSGALG 310
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+H Y NG + + +G +L+DMYAKCG ++ A VF++M+ KD+++W +I G A
Sbjct: 311 SGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWA 370
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HGR A+ F +M +GE PD + F+ +L AC + G V+ GL++F SM +DY+I P +
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTL 430
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY +VDLL RAG+L EA + V+ MPI D WA L +C+ +K+ ++ L+ L E
Sbjct: 431 KHYVLVVDLLGRAGKLDEAHELVEYMPINPDLTTWAALYRACKAHKS-NRTDIVLQNLLE 489
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L+P+ +++ L + G+++DV + +++++ ++ GCS IE++
Sbjct: 490 LDPELRGSYIFLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIELD 538
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 261/479 (54%), Gaps = 71/479 (14%)
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
+V+ INA +H LK GF + +FV ALI +Y+
Sbjct: 29 LVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAM----------------- 71
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
CG + A+ +F+ +RD++ WNT++ GY E +LFD M
Sbjct: 72 --------------CGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMT 117
Query: 225 ----KKDVIS-------------W----------------------NTMLSGYANNGDVE 245
K D ++ W NT++ Y G++
Sbjct: 118 AANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLT 177
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
++LF+ MP+R+V SW +I GY+ F + + F+ M+ +V P+ T+ +VLSAC
Sbjct: 178 AARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMA-AKVKPDKVTVASVLSAC 236
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LG LD VH Y +G Q ++ VGN+LIDMY KCG++E A++VF+ M KD ++W
Sbjct: 237 AHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWT 296
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++ISGLA++G AL LF +M G P TF+GIL AC H GLV +GL YF+SM
Sbjct: 297 SVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESV 356
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ +VP ++HYGC+VDLL+R+G + +A +F+K+MPI D V+W LL +C+++ NV LAE+
Sbjct: 357 HGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEI 416
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A +RL EL+P + N+V+LSN Y + RW D +++ M D+ +K G SSIEV+ +V
Sbjct: 417 ATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMV 475
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 30/389 (7%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
TT ++ + ++ H+H ++ G E +++ +I A Q+ +A+KMFD + D+
Sbjct: 34 TTNINASTISSSIHVHALKL-----GFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 88
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
++VSWN + GY+Q ++ V+ LF M + + T ++ +C + + +
Sbjct: 89 DLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV 148
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ +N ++++G LI++Y + AA K+F M +R+V+ WTSMI GY
Sbjct: 149 KYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFS 208
Query: 184 SARCLFE------LAPERDVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWN 232
A LF+ + P++ + +++S G +DV + + + D+ N
Sbjct: 209 DAVKLFQEMMAAKVKPDKVTV--ASVLSACAHLGKLDVGWAVH-HYIRRHGVQADIYVGN 265
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+++ Y G VE+ +F M +++ SW +I G A NG LD F +ML EG V
Sbjct: 266 SLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREG-VQ 324
Query: 293 PNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
P T V +L ACA G ++ F V+ + CV +D+ ++ G I+
Sbjct: 325 PTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCV----VDLLSRSGNID 380
Query: 348 NAVDVFNSMD-TKDLITWNTIISGLAMHG 375
A + M D++ W ++S +HG
Sbjct: 381 KAYEFIKKMPIVPDVVVWRILLSACKLHG 409
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
A V++ + A S +HV+A G++ + V NALI MYA CG + A +F+
Sbjct: 25 APAALVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDG 84
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMG---LV 412
M +DL++WNT+I G + + + L LF M A D +T + I+ AC+H+G
Sbjct: 85 MLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFA 144
Query: 413 EEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
+ + Y + + +I+ Y ++D+ R G L A MP + D + W ++
Sbjct: 145 DSMVKYIKENNL------EIDVYLGNTLIDMYGRLGNLTAARKLFDNMP-KRDVISWTSM 197
Query: 471 L 471
+
Sbjct: 198 I 198
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 285/534 (53%), Gaps = 17/534 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V G E ++ ++ ++ + A K+F + ++V SWNAM +G+ QN
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + +MK + T +L C + + + G +H VLK+G +++FV
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI +YS ++ A VF +M+ R++V W S+I Y D +A F+ + P
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP 321
Query: 194 ER-DVILWNTIVSGYIDVR------NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+ V+ +I S D R + R+ D KDV+ N +++ YA G +
Sbjct: 322 DLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLD----KDVVIGNALVNMYAKLGYMNC 377
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+F+++P ++ SWN L+ GY NGL E +DA+ M PN T V+++ A +
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+GAL +H N +V V LID+Y KCG +E+A+ +F + + WN
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II+ L +HGRG AL LF +M D ITF+ +L AC+H GLV+EG F M +Y
Sbjct: 498 IIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEY 557
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P ++HYGCMVDLL RAG L +A + V+ MPI+ DA IW LL +C++Y N EL LA
Sbjct: 558 GIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLA 617
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+RL E++ +N +V+LSNIY + +W+ V +++ RD G +K PG SS+ V
Sbjct: 618 SDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVV 671
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
++++ +++ Y +GD+ + F+ + ++N+FSWN +I Y G + E ++ ++
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 286 LT---EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ G + P+ T +L AC L +D K VH G++ +V V +L+ +Y++
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSL--VD-GKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G+++ A VF M KD+ +WN +ISG +G AGAL + + MK G D IT I
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L C V G+ + + + + ++++ ++ GRL +A +M +
Sbjct: 229 LPVCAQSDDVINGV-LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR- 286
Query: 463 DAVIWANLLG----------SCRVYKNVELAELALERLT 491
D V W +++ + R +K ++L + + LT
Sbjct: 287 DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 275/534 (51%), Gaps = 69/534 (12%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVSWNAMFN 73
K L QIQ Q++ + + + + +T C + + YA+++F+ IT N WNA+
Sbjct: 2 KQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIR 61
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
Y+ ++ + + QM N +TFP +L++C + A+ E ++H LV+K GF +
Sbjct: 62 AYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGS 121
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
++F A +++ Y CG+I C
Sbjct: 122 DVFALNA-------------------------------LLHVYALCGEI---HC------ 141
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
AR+LFD +P++D +SWN M+ GY +GDV+ +F +
Sbjct: 142 ----------------------ARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLD 179
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA-TIVTVLSACARLGALD 312
MP +NV SW LI G G E L M G F D I ++L+ACA LGALD
Sbjct: 180 MPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAG--FELDGVAIASLLTACANLGALD 237
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM--DTKDLITWNTIISG 370
+W+H Y NG + +G AL++MY KCG +E A+ VF + + KD+ W +I G
Sbjct: 238 QGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDG 297
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A+HGRG AL F+ M+ G P+ ITF +L AC++ GLVEEG F+SM Y++ P
Sbjct: 298 FAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNP 357
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
IEHYGCMVDLL R+GRL EA + +K+MP++ AVIW LL +C ++++ L L
Sbjct: 358 SIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHL 417
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E++ + ++ L+ I G+WK+ A +++ M+ G PG SS+ +N +V
Sbjct: 418 VEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIV 471
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/614 (30%), Positives = 308/614 (50%), Gaps = 87/614 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITD-----QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
+ITACA + A + +K+ NVVSW+A+ G+AQN + + + +M+
Sbjct: 232 VITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVE 291
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+PN T VL +C ++ L G++LH + ++ F +N V AL+++Y + A
Sbjct: 292 GLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGA 351
Query: 155 YKVFGE-------------------------------MD----ERNVVVWTSMINGYI-- 177
K+F + MD ER ++ W S+I+GY+
Sbjct: 352 AKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRN 411
Query: 178 -------------------------------SCGDIVSARCLFELAPE-------RDVIL 199
+C D +S R E+ + D +
Sbjct: 412 FMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFV 471
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP---- 255
+V Y +++ A+ FD++ +KDV +WN ++SGY + +E + L E+M
Sbjct: 472 GGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGY 531
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
N+++WN ++ G N + F M ++ P+ T+ +L AC+RL L+ K
Sbjct: 532 HPNIYTWNSILAGLVENRQLDLTMQLFSEMQIS-KLRPDIYTVGIILPACSRLATLERGK 590
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
H ++ GY +V +G AL+DMYAKCG ++ A ++ + +L++ N +++ AMHG
Sbjct: 591 QAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHG 650
Query: 376 RGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
G +SLF M G +PD +TF+ +L +C H+G VE G +F M Y++ P ++HY
Sbjct: 651 HGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGY-YNVKPTLKHY 709
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEP 495
MVDLL+R+G+L EA + +K+MP+E D+V+W LLG C + N+EL E+A ERL ELEP
Sbjct: 710 TSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEP 769
Query: 496 KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE-VNEVVMLGCLSRELD 554
N N+V+L+N++ RW D+AR++ M+D G K PGCS IE NE+ R
Sbjct: 770 NNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHK 829
Query: 555 RKSIVRAEANMIKL 568
R + A + + L
Sbjct: 830 RAEEIYATLDYLAL 843
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 233/555 (41%), Gaps = 85/555 (15%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + +G + +I +++ A+ + A +F+ + +N+ SW A+ + Y +
Sbjct: 80 QVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHG 139
Query: 80 FHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+LF Q+ + D + + F FP+V K+C + ++ G +LH LV+K F NI+V
Sbjct: 140 LFEEAFLLF-QVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVS 198
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD-- 196
ALI++Y +++ A KV +M ER+ V W S+I + G + A E D
Sbjct: 199 NALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYS 258
Query: 197 ---VILWNTIVSGYID-----------VRNMIE------------------------ARK 218
V+ W+ ++ G+ R +E ++
Sbjct: 259 MPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQ 318
Query: 219 LFDQMPKKDVIS----WNTMLSGYANNGDVEECKRLFEEMPERNVFS------------- 261
L + + D IS N ++ Y GD+ ++F + +NV S
Sbjct: 319 LHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGD 378
Query: 262 ----------------------WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
WN +I GY N +F E F+ ML E + P+ T+
Sbjct: 379 VSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLG 438
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+VL+ACA +L K +H A G Q + VG AL++MY+KC + A F+ + K
Sbjct: 439 SVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEK 498
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D+ TWN +ISG + L +MK G P+ T+ IL ++ + F
Sbjct: 499 DVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLF 558
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRL---AEAVDFVKRMPIEADAVIWANLLGSCRV 476
M + + P I G ++ +R L +A + + D I A L+
Sbjct: 559 SEMQIS-KLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAK 617
Query: 477 YKNVELAELALERLT 491
+++ A+LA +R++
Sbjct: 618 CGSLKYAQLAYDRIS 632
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 199/449 (44%), Gaps = 56/449 (12%)
Query: 94 LDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
LD P N + VL SC + G+++H +K GF A+ F+ T L+++Y+ ++
Sbjct: 55 LDNKPLNTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLK 111
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYI 208
A +F M RN+ W ++++ Y+ G A LF++ E D ++ +
Sbjct: 112 DADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACS 171
Query: 209 DVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERN------ 258
+ ++ R+L + K ++ N ++ Y G +++ K++ +MPER+
Sbjct: 172 GLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNS 231
Query: 259 ------------------------------VFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
V SW+ +IGG+A NG E ++ RM E
Sbjct: 232 VITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVE 291
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G V PN T+ VL ACARL LD K +H Y + + N V NAL+D+Y +CG +
Sbjct: 292 GLV-PNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGG 350
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A +F K++++ NT+I G G + A LF M G I++ I+
Sbjct: 351 AAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVR 410
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYG-----CMVDLLARAGRLAEAVDFVKRMPIEAD 463
+ +E S FQ+M M+ I P G C + R G+ A VK + ++D
Sbjct: 411 NFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGL--QSD 468
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTE 492
+ L+ +++ A++A + + E
Sbjct: 469 TFVGGALVEMYSKCQDLTAAQVAFDEVME 497
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 135/297 (45%), Gaps = 52/297 (17%)
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--- 290
+L YA G +++ LFE MP RN+ SW ++ Y ++GLF E F+ + +G
Sbjct: 100 LLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELD 159
Query: 291 --VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
VFP V AC+ LG+++ + +H + N+ V NALIDMY KCG +++
Sbjct: 160 FFVFP------LVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDD 213
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A V M +D +TWN++I+ AC
Sbjct: 214 AKKVLVKMPERDSVTWNSVIT-----------------------------------ACAA 238
Query: 409 MGLVEEGLSYFQSM-AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA---DA 464
G+V E L + + M ++DYS+ P + + ++ A+ G EA++ + RM +E +A
Sbjct: 239 NGMVYEALEFLEKMKSLDYSM-PNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNA 297
Query: 465 VIWANLLGSCRVYKNVELAELALERLTELE-PKNPANFVMLSNIYGDLGRWKDVARI 520
A +L +C + ++L + +T + NP L ++Y G A+I
Sbjct: 298 QTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKI 354
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 133/298 (44%), Gaps = 44/298 (14%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I Q + GL+ ++ ++ ++ + +T A+ FD++ +++V +WNA+ +GY ++
Sbjct: 455 EIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSN 514
Query: 80 ----------------FHRTVVV-------------------LFTQMKKLDAMPNCFTFP 104
+H + LF++M+ P+ +T
Sbjct: 515 QIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVG 574
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
I+L +C ++ L G++ H +K G+ ++ +G AL+++Y+ +++ A + +
Sbjct: 575 IILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNP 634
Query: 165 NVVVWTSMINGYISCGDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNMIEARKLF 220
N+V +M+ G LF+ L D + + +++S + V ++ + F
Sbjct: 635 NLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFF 694
Query: 221 DQMP----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNG 273
D M K + + +M+ + +G + E L ++MP E + W L+GG +G
Sbjct: 695 DLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHG 752
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
Query: 294 NDATIVTVLSAC--ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N + +VL +C +LG K VH + G+ + + L+ MYA+CG++++A
Sbjct: 61 NTSKYASVLDSCKCPKLG-----KQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADF 115
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F +M ++L +W I+S HG A LF ++ G D F + AC+ +G
Sbjct: 116 LFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGS 175
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
VE G + + + I ++D+ + G L +A + +MP E D+V W +++
Sbjct: 176 VELG-RQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVI 233
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+C V A LE++ L+ P N V S + G +
Sbjct: 234 TACAANGMVYEALEFLEKMKSLDYSMP-NVVSWSAVIGGFAQ 274
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L T + Q + G + +I ++ A+ + YA+ +D+I++ N+VS NA
Sbjct: 582 RLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNA 641
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M A + + LF M L +P+ TF VL SCV + ++ G E L+
Sbjct: 642 MLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGYYN 701
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSA 185
+ + T++++L S + AY++ +M E + V+W +++ G ++ G+I ++A
Sbjct: 702 VKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAA 761
Query: 186 RCLFELAP 193
L EL P
Sbjct: 762 ERLIELEP 769
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/547 (33%), Positives = 287/547 (52%), Gaps = 50/547 (9%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVS 67
+L K L Q Q +V +G I ++I ++ + L + +A +F + + +
Sbjct: 7 HRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSMDDSFI 66
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC---VKINAL-------- 116
N M Y+ F ++++ +M+++D + FT+ VL++C +K +
Sbjct: 67 CNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDDQCFGHH 126
Query: 117 ---REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
R+G E+H +LK GF + V +L+ +YS + A +F EM + V
Sbjct: 127 IISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAVS----- 181
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
WN ++S Y V + A L + MP+ + +SWNT
Sbjct: 182 --------------------------WNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNT 215
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+L+ Y ++ +++FEEMPER+V SWN +I GY N + LD F M + +
Sbjct: 216 LLARYIRLNNLVAARKVFEEMPERDVVSWNSIISGYVNVKDYKGALDLFHSM-KQWNIRA 274
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ T +++L ACA LGAL+ K +H + Y+ +GNA++DMYAKCG + A++VF
Sbjct: 275 TEVTFISILGACAELGALEIGKKIHDSLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVF 334
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK--NAGEMPDGITFIGILCACTHMGL 411
N M+ K + WN +I GLA+HG AL +F MK + P+ ITFI +L AC+H GL
Sbjct: 335 NEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEDGDHKPNRITFIALLIACSHKGL 394
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ EG +F M Y I+P ++HYGCM+DLL+R G L EA +K P + +V+W LL
Sbjct: 395 LAEGRHFFSLMVTKYKIMPDLKHYGCMIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLL 454
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
G CR++++VEL E + +L ELEP ++V+LSNIY + RW DV R++ M + G K
Sbjct: 455 GGCRLHRHVELGEESFRKLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMINYGVCK 514
Query: 532 LPGCSSI 538
G S +
Sbjct: 515 KAGSSHV 521
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 288/587 (49%), Gaps = 83/587 (14%)
Query: 40 IITACAQLKQMTYARKMFDKITD--QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM 97
++ A A ++ A FD + ++ V NA+ + YA+ V +F + ++
Sbjct: 94 LVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153
Query: 98 -PNCFTFPIVLKSCVKIN--ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEA- 153
P+ ++F +L + + ++R +LHC VLK+G + V AL+ LY ++ EA
Sbjct: 154 RPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEAT 213
Query: 154 ---------------------------------AYKVFGEMDERNVVVWTSMINGYISCG 180
A VF E+D + VVW +MI+GY+ G
Sbjct: 214 RDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSG 273
Query: 181 DIVSARCLFE-------------------------------------------LAPERDV 197
V A LF PE +
Sbjct: 274 MAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAAL 333
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
+ N +V+ Y N+ AR++FD M KDV+SWNT+LSGY + +++ +FEEMP +
Sbjct: 334 PVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK 393
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
N SW ++ GY + G + L F +M +E V P D T ++AC LGAL K +
Sbjct: 394 NELSWMVMVSGYVHGGFAEDALKLFNKMRSEN-VKPCDYTYAGAIAACGELGALKHGKQL 452
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H + G++G+ GNALI MYA+CG ++ A +F M D ++WN +IS L HG G
Sbjct: 453 HGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHG 512
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
AL LF M G PD I+F+ +L AC H GLV+EG YF+SM D+ I+P +HY
Sbjct: 513 REALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTR 572
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++DLL RAGR+ EA D +K MP E IW +L CR ++EL A ++L ++ P++
Sbjct: 573 LIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQH 632
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+++LSN Y G W D AR++ MRD G KK PGCS IE V
Sbjct: 633 DGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L KH Q+ +V G E S+ +IT A+ + A MF + + + VSWNA
Sbjct: 442 ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNA 501
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M + Q+ R + LF +M P+ +F VL +C + EG + +K
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFR-YFESMKRD 560
Query: 131 FRANIFVG----TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIV-- 183
F I G T LI+L I A + M E +W ++++G + GD+
Sbjct: 561 F--GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELG 618
Query: 184 --SARCLFELAPERD---VILWNT 202
+A LF++ P+ D ++L NT
Sbjct: 619 AHAADQLFKMTPQHDGTYILLSNT 642
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/452 (38%), Positives = 256/452 (56%), Gaps = 43/452 (9%)
Query: 119 GEELHCLVLKNGFRA-NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
GE +HC LK GF ++ VG AL+ Y+ K+++ A KVF EM ER+VV WT++++GY
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYA 220
Query: 178 SCGDIVSARCLF----------------------------------------ELAPERDV 197
G A LF E R V
Sbjct: 221 RAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSV 280
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
L N +V + + AR++FD M KDV SW +M++ YA GD+E ++LF++MP R
Sbjct: 281 NLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRR 340
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
NV SW+ +I Y+ E + F+ M+ G V P DAT+V+VLSACA+LG LD +W+
Sbjct: 341 NVVSWSCMIAAYSQLNQPEEAVWLFREMIAAG-VDPIDATLVSVLSACAQLGCLDLGRWI 399
Query: 318 HV-YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+ Y N V +GNALIDM+AKCG + A +F+ M +++++WNT+I A+HG+
Sbjct: 400 YENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQ 459
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
A+ LF ++K +PD ITF+G+L +C+H GLV EG YF+ M M Y I P++EHY
Sbjct: 460 SEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYA 519
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
CM+DLL + G L EA + + MP+EAD W LL +CR++ NVE+ ++L EL+P
Sbjct: 520 CMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPS 579
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTG 528
+ +V++S IY +W V +++ MRD G
Sbjct: 580 DSGIYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 174/378 (46%), Gaps = 52/378 (13%)
Query: 45 AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTF 103
A K + A K+FD++ +++VVSW + +GYA+ LF +M + M PN T
Sbjct: 189 ANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTL 248
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
+ + ++ L G LH V + G ++ + AL++++ + A +VF M+
Sbjct: 249 VAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEV 308
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM 223
++V WTSM+N Y CGD+ SA LF+ P R+V+ W+ +++ Y + EA LF +M
Sbjct: 309 KDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREM 368
Query: 224 PKK----------------------DVISW------------------NTMLSGYANNGD 243
D+ W N ++ +A GD
Sbjct: 369 IAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGD 428
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V E +LF+EM ERNV SWN +I +A +G E + F+++ E + P+ T + +L+
Sbjct: 429 VGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGE-NIVPDQITFLGLLA 487
Query: 304 ACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+C+ G + F + Y + C +ID+ K G++E A +V M
Sbjct: 488 SCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYAC----MIDLLGKVGLLEEAFEVARGMPM 543
Query: 359 K-DLITWNTIISGLAMHG 375
+ D W +++ MHG
Sbjct: 544 EADEAGWGALLNACRMHG 561
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 38/299 (12%)
Query: 26 VTSGLEKSD-YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
V G+E D Y ++ A A+ + A ++F + +NVVSW+ M Y+Q
Sbjct: 302 VFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEA 361
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH-CLVLKNGFRANIFVGTALIE 143
V LF +M P T VL +C ++ L G ++ ++ N + +G ALI+
Sbjct: 362 VWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALID 421
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
+++ + A K+F EM ERNVV W +MI + G A LFE +++
Sbjct: 422 MFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIV----- 476
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERN 258
D I++ +L+ +++G V E +R F+EM E
Sbjct: 477 ----------------------PDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPR 514
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
V + +I GL E + + M E ++A +L+AC G ++ V
Sbjct: 515 VEHYACMIDLLGKVGLLEEAFEVARGMPMEA----DEAGWGALLNACRMHGNVEIGACV 569
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A+ + A K+FD++ ++NVVSWN M +A + + LF Q+K + +P+
Sbjct: 419 LIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPD 478
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG--TALIELYSTGKAIEAAYKV 157
TF +L SC + EG + ++ +R V +I+L +E A++V
Sbjct: 479 QITFLGLLASCSHSGLVSEGRR-YFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEV 537
Query: 158 FGEMD-ERNVVVWTSMINGYISCGDIVSARC----LFELAPERDVILWNTIVSGYIDVRN 212
M E + W +++N G++ C L EL P I Y+ +
Sbjct: 538 ARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGI--------YVLMSQ 589
Query: 213 MIEARKLFDQ--MPKKDVISWNTMLSGYAN 240
+ ++ +DQ M + + T+L G A
Sbjct: 590 IYASKNKWDQVKMLRMTMRDRGTVLDGIAT 619
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/346 (45%), Positives = 226/346 (65%), Gaps = 2/346 (0%)
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
I+ +++ GY M +ARKLFD + +++V+SW ++SGYA G V + LFE MPER
Sbjct: 155 IIRTSVLDGYSRHGMMADARKLFDGLTERNVVSWTALVSGYARAGKVGDAIVLFERMPER 214
Query: 258 NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV 317
+V +WN +I G + NGLF E + F RM+ G PN T+ VLSAC LG L K +
Sbjct: 215 DVAAWNAIIAGCSQNGLFVEAVGIFGRMVGAG-FRPNATTVSCVLSACGHLGMLKIGKLI 273
Query: 318 HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRG 377
H YA V N LIDMY KCG +E A +F+ + + L TWN++I+ LA+HG
Sbjct: 274 HCYAWRTCVGFGSSVLNGLIDMYGKCGNLEGARWIFDEVSDRSLTTWNSLINCLALHGHS 333
Query: 378 AGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC 437
A+S+F+EM+ G PD +TF+G+L ACTH G V+EG+ YF+ M ++ I P+IEHYGC
Sbjct: 334 KCAISVFNEMRGEGVEPDVVTFVGLLNACTHGGFVDEGIRYFELMQHEHGIEPEIEHYGC 393
Query: 438 MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKN 497
++DLL RAGR +A++ + M IEAD V+W +LL +CRV++ VE AELA+ +L EL+P N
Sbjct: 394 IIDLLGRAGRFQDALNVISDMRIEADEVMWGSLLNACRVHRQVEFAELAIRKLLELDPNN 453
Query: 498 PANFVMLSNIYGDLGRWKDVARIKVAMRDTGF-KKLPGCSSIEVNE 542
VML+N+Y + G W++V +++ +++ KKLPGCS IEV+
Sbjct: 454 ANYVVMLANVYSEGGLWEEVRKVRKFVKEENIGKKLPGCSWIEVDR 499
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 190/420 (45%), Gaps = 60/420 (14%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWN 69
+ T HL Q+ +G + T +I A +L +TYAR +FD +V ++
Sbjct: 18 RCSTRAHLEQLHAHAFVAGRAAAQTTTFHLIRFAAFRLSCLTYARHLFDATPHPSVFLYS 77
Query: 70 AMFNGYAQNEFHRTVVV-----------LFTQM-KKLDAMPNCFTFPIVLK--SCVKINA 115
A+ + Y + LF +M + PN F +P+VL+ S V +
Sbjct: 78 AILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVYPLVLRAASGVGVGI 137
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
++ +H K+GF + + T++++ YS + A K+F + ERNVV WT++++G
Sbjct: 138 VKS---IHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTERNVVSWTALVSG 194
Query: 176 YISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------PKKDVI 229
Y G + A LFE PERDV WN I++G +EA +F +M P +
Sbjct: 195 YARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRMVGAGFRPNATTV 254
Query: 230 S----------------------WNT-------MLSG----YANNGDVEECKRLFEEMPE 256
S W T +L+G Y G++E + +F+E+ +
Sbjct: 255 SCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCGNLEGARWIFDEVSD 314
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-K 315
R++ +WN LI A +G + F M EG V P+ T V +L+AC G +D +
Sbjct: 315 RSLTTWNSLINCLALHGHSKCAISVFNEMRGEG-VEPDVVTFVGLLNACTHGGFVDEGIR 373
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ + +G + + +ID+ + G ++A++V + M + D + W ++++ +H
Sbjct: 374 YFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEVMWGSLLNACRVH 433
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 33/315 (10%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
I + SG D I ++ ++ M ARK+FD +T++NVVSW A+ +GYA+
Sbjct: 140 SIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTERNVVSWTALVSGYARAG 199
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN----- 134
+VLF +M + D + ++ C + E + ++ GFR N
Sbjct: 200 KVGDAIVLFERMPERDVA----AWNAIIAGCSQNGLFVEAVGIFGRMVGAGFRPNATTVS 255
Query: 135 -IFVGTALIELYSTGKAIEA-AYKV---FGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
+ + + GK I A++ FG V +I+ Y CG++ AR +F
Sbjct: 256 CVLSACGHLGMLKIGKLIHCYAWRTCVGFGSS------VLNGLIDMYGKCGNLEGARWIF 309
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVE 245
+ +R + WN++++ + A +F++M + DV+++ +L+ + G V+
Sbjct: 310 DEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNACTHGGFVD 369
Query: 246 ECKRLFEEMP-----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
E R FE M E + + +I G F + L+ M R+ ++ +
Sbjct: 370 EGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDM----RIEADEVMWGS 425
Query: 301 VLSACARLGALDFSK 315
+L+AC ++F++
Sbjct: 426 LLNACRVHRQVEFAE 440
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 155/374 (41%), Gaps = 83/374 (22%)
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F RML GR PN VL A + +G + K +H +A +G+ G+ + +++D Y+
Sbjct: 107 FLRMLRHGRPAPNQFVYPLVLRAASGVG-VGIVKSIHSHACKSGFCGHDIIRTSVLDGYS 165
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK------------- 388
+ G++ +A +F+ + +++++W ++SG A G+ A+ LF M
Sbjct: 166 RHGMMADARKLFDGLTERNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAG 225
Query: 389 ------------------NAGEMPDGITFIGILCACTHMGLVEEG-----LSYFQSMAMD 425
AG P+ T +L AC H+G+++ G ++ +
Sbjct: 226 CSQNGLFVEAVGIFGRMVGAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFG 285
Query: 426 YSIVPQ-IEHYG------------------------CMVDLLARAGRLAEAVDFVKRM-- 458
S++ I+ YG +++ LA G A+ M
Sbjct: 286 SSVLNGLIDMYGKCGNLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRG 345
Query: 459 -PIEADAVIWANLLGSCR----VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+E D V + LL +C V + + EL ++ +EP+ ++ + ++ G GR
Sbjct: 346 EGVEPDVVTFVGLLNACTHGGFVDEGIRYFEL-MQHEHGIEPE-IEHYGCIIDLLGRAGR 403
Query: 514 WKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLPQNN 573
++D + MR IE +EV+ L+ + + AE + KLL +
Sbjct: 404 FQDALNVISDMR------------IEADEVMWGSLLNACRVHRQVEFAELAIRKLLELDP 451
Query: 574 HPLTFIVVIFSTFA 587
+ ++V++ + ++
Sbjct: 452 NNANYVVMLANVYS 465
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 297/516 (57%), Gaps = 12/516 (2%)
Query: 29 GLEKSDYIT-PRIITACAQLKQMTYARKMFDKI-TDQNVVSWNAMFNGYAQNEFHRTVVV 86
GL + D +T +IT +L M AR++FD++ + +NVV+W AM +GY +++ +
Sbjct: 71 GLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEM 130
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
LF +M + N ++ ++ + + + EL + + NI ++++
Sbjct: 131 LFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALV 182
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
I+ A +F M R+VV WT+M++G G + AR LF+ PER++I WN +++G
Sbjct: 183 QRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG 242
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
Y + EA +LF MP++D SWNTM++G+ N ++ + LF+ MPE+NV SW +I
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY N E L+ F +ML +G V PN T V++LSAC+ L L + +H + +
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLF 384
Q N V +AL++MY+K G + A +F++ + +DLI+WN++I+ A HG G A+ ++
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
++M+ G P +T++ +L AC+H GLVE+G+ +F+ + D S+ + EHY C+VDL R
Sbjct: 423 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 482
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AGRL + +F+ + +L +C V+ V +A+ ++++ E + +V++
Sbjct: 483 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLM 542
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
SNIY G+ ++ A +++ M++ G KK PGCS ++V
Sbjct: 543 SNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 18/312 (5%)
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER-DVILWN 201
EL GK EA K+F + ER+VV WT +I GYI GD+ AR LF+ R +V+ W
Sbjct: 55 ELCKVGKIAEAR-KLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWT 113
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+VSGY+ + + A LF +MP+++V+SWNTM+ GYA +G +++ LF+EMPERN+ S
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN ++ G E ++ F+RM V + ++ A+ G +D ++ +
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVV-----SWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
+ N+ NA+I YA+ I+ A +F M +D +WNT+I+G + A
Sbjct: 229 P----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M + I++ ++ EE L+ F M D S+ P + G V +
Sbjct: 285 GLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV---GTYVSI 337
Query: 442 LARAGRLAEAVD 453
L+ LA V+
Sbjct: 338 LSACSDLAGLVE 349
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYA 76
QI + S +K++ +T ++ ++ ++ ARKMFD + ++++SWN+M YA
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+ + + ++ QM+K P+ T+ +L +C + +G E
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 293/544 (53%), Gaps = 39/544 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A+L + +A + F+ + +++VVSWN M +Q+ R + L +M + +
Sbjct: 200 MLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLD 259
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L +C ++ +L G++LH V+++ + + +V +ALIELY+ + + A +VF
Sbjct: 260 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN 319
Query: 160 EMDERNVVVWT-----------------------------------SMINGYISCGDIVS 184
+ +RN V WT ++I+G + D+
Sbjct: 320 SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL 379
Query: 185 ARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
R L L R +++ N+++S Y ++ A +F M ++D++SW +M++ Y+
Sbjct: 380 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 439
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G++ + + F+ M RN +WN ++G Y +G + L + ML++ V P+ T VT
Sbjct: 440 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 499
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+ CA +GA + + G NV V NA I MY+KCG I A +F+ ++ KD
Sbjct: 500 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 559
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+++WN +I+G + HG G A F +M + G PD I+++ +L C+H GLV+EG YF
Sbjct: 560 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFD 619
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M + I P +EH+ CMVDLL RAG L EA D + +MP++ A +W LL +C+++ N
Sbjct: 620 MMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGND 679
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELAELA + + EL+ + ++++L+ IY D G+ D A+++ MRD G KK PG S +EV
Sbjct: 680 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 739
Query: 541 NEVV 544
V
Sbjct: 740 ENKV 743
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 192/456 (42%), Gaps = 51/456 (11%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFD-KITDQNVVSWNAMFNGYAQNE 79
+ ++VT GL + ++ ++ A ++ AR++ I + NV++ N M NGYA+
Sbjct: 42 LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 101
Query: 80 FHRTVVVLFTQMKKLDA------MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
LF +M + D M + SC + +L L K F
Sbjct: 102 SLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWG 161
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
+ V TAL++++ ++ A ++F +++ + SM+ GY I A FE
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 221
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV-------------------ISWNTM 234
ERDV+ WN +++ + EA L +M +K V + W
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 281
Query: 235 LSG--------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
L YA G +E KR+F + +RN SW LIGG
Sbjct: 282 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 341
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
F + ++ F +M E A + T++S C L + +H +G+ + V N
Sbjct: 342 FSKSVELFNQMRAELMAIDQFA-LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 400
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
+LI +YAKCG ++NA VF+SM +D+++W ++I+ + G A F M
Sbjct: 401 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMAT----R 456
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ IT+ +L A G E+GL + +M + P
Sbjct: 457 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 185/428 (43%), Gaps = 61/428 (14%)
Query: 97 MPNCFTFPIV--LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
+P+ T + L+SC AL LH ++ G + +F+ L+ Y + A+ A
Sbjct: 15 LPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDA 74
Query: 155 YKVF-GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS-------- 205
++ ++ E NV+ M+NGY G + A LF+ P RDV WNT++S
Sbjct: 75 RRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGS 134
Query: 206 ------------------------------------------GYIDVRNMIEARKLFDQM 223
GY+D A +LF Q+
Sbjct: 135 WMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDF-----ASRLFSQI 189
Query: 224 PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
+ + N+ML+GYA ++ FE+M ER+V SWN +I + +G E L
Sbjct: 190 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 249
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
M +G V + T + L+ACARL +L + K +H + Q + V +ALI++YAKC
Sbjct: 250 EMHRKG-VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 308
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G + A VFNS+ ++ ++W +I G + + ++ LF++M+ D ++
Sbjct: 309 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 368
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
C + + G S+ + I ++ L A+ G L A +FV E D
Sbjct: 369 SGCFNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERD 426
Query: 464 AVIWANLL 471
V W +++
Sbjct: 427 IVSWTSMI 434
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 34/307 (11%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFD-QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V L NT++ Y+ + +AR+L + + +VI+ N M++GYA G + + + LF+ MP
Sbjct: 55 VFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP 114
Query: 256 ERNVFSWNGLI-------------GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
R+V SWN L+ G L ++L F + F D + T L
Sbjct: 115 RRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKF-----DFWGDPDVETAL 169
Query: 303 -SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
R G +DF+ + E + + N+++ YAK I++A++ F M +D+
Sbjct: 170 VDMFVRCGYVDFASRLFSQIE----RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDV 225
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
++WN +I+ L+ GR AL L EM G D T+ L AC + + G Q
Sbjct: 226 VSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGK---QL 282
Query: 422 MAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY-- 477
A +PQI+ Y +++L A+ G EA + + ++V W L+G Y
Sbjct: 283 HAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYEC 341
Query: 478 --KNVEL 482
K+VEL
Sbjct: 342 FSKSVEL 348
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 28/257 (10%)
Query: 290 RVFPNDAT--IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
R+ P+ T + L +C GAL ++ +H G V + N L+ Y CG +
Sbjct: 13 RLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALS 72
Query: 348 NAVDVFNS-MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE------MPDGITFI 400
+A + + + ++IT N +++G A G + A LF M M D
Sbjct: 73 DARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPA 132
Query: 401 GILCACTHMG---LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
G +C +G L + L F D+ P +E +VD+ R G VDF R
Sbjct: 133 GSWMSCGALGCRELAPQLLGLFWK--FDFWGDPDVE--TALVDMFVRCGY----VDFASR 184
Query: 458 M--PIEADAVIWAN--LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
+ IE + N L G ++Y + A+E ++ ++ ++ M+ GR
Sbjct: 185 LFSQIERPTIFCRNSMLAGYAKLYG----IDHAIEYFEDMAERDVVSWNMMIAALSQSGR 240
Query: 514 WKDVARIKVAMRDTGFK 530
++ + V M G +
Sbjct: 241 VREALGLVVEMHRKGVR 257
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 273/503 (54%), Gaps = 67/503 (13%)
Query: 43 ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFT 102
A A ++ ++ +F + D ++ + A N + N +L+ Q+ PN FT
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +LKSC + + G+ +H VLK G + +V T
Sbjct: 131 FSSILKSC----STKSGKLIHTHVLKFGLGLDPYVATG---------------------- 164
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+++ Y GD+VSA+ K+FD+
Sbjct: 165 ---------LVDIYAKGGDVVSAQ-------------------------------KVFDR 184
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP++ ++S M++ YA G+VE + LF+ M ER++ SWN +I GY+ +G + L F
Sbjct: 185 MPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLF 244
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+++L +G+ P++ T+V LSAC+++GAL+ +W+HV+ + + NV V ALIDMY+K
Sbjct: 245 QKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSK 304
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN-AGEMPDGITFIG 401
CG +E AV VFN KD++ WN +I+G AMHG AL LF EM+ G P ITFIG
Sbjct: 305 CGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIG 364
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L AC H GLV EG+ F+SM +Y I P+IEHYGC+V LL RAG+L A + +K M +E
Sbjct: 365 TLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNME 424
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
AD+V+W+++LGSC+++ L + E L N +V+LSNIY +G ++ VA+++
Sbjct: 425 ADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVR 484
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
M++ G K PG S+IE++ V
Sbjct: 485 NLMKEKGIVKEPGISTIEIDNKV 507
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 147/345 (42%), Gaps = 51/345 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
E+S + +IT A+ + AR +FD++ ++++VSWN M +GY+Q+ F ++LF +
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 91 -MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+ P+ T L +C +I AL G +H V + R N+ V TALI++YS
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID 209
++E A VF + +++V W +MI GY + GY
Sbjct: 307 SLEEAVLVFNDTPRKDIVAWNAMITGY--------------------------AMHGYSQ 340
Query: 210 VRNMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMPER-----NV 259
+A +LFD+M + I++ L A+ G V E ++FE M + +
Sbjct: 341 -----DALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKI 395
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
+ L+ G + K M E + +VL +C G K +
Sbjct: 396 EHYGCLVSLLGRAGQLKRAYEIIKNMNMEA----DSVLWSSVLGSCKLHGEFMLGKEI-- 449
Query: 320 YAEYNGYQ--GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
AEY Q N + L ++YA G E V N M K ++
Sbjct: 450 -AEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIV 493
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 256/451 (56%), Gaps = 10/451 (2%)
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ T PI LKS ++ + LR GE+LH LK N V T+L+ LY+ + A +
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRN 212
VF EM + V WT++I Y+ GD+ A R F D +++ + +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 213 MIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ ++ + + V + Y G++ + + +F++M ++ +W ++GG
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
YA+NG E LD F M EG + P+ + LSAC RLGALD + +++ +
Sbjct: 248 YASNGHPREALDLFLAMQAEG-MKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
N +G ALIDMYAKCG A VF M KD+I WN +I GL M G A +L +M+
Sbjct: 307 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 366
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+G + TFIG+LC+CTH GL+++G YF +M Y I P+IEHYGCMVDLL+RAG L
Sbjct: 367 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 426
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA V MP+ A+AVI LLG C++++N ELAE L++L LEP N N+VMLSNIY
Sbjct: 427 QEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 486
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRW+D A++++ M+ G +K+P CS +E
Sbjct: 487 SNRGRWEDAAKLRLDMKAKGVEKVPACSWVE 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 154/367 (41%), Gaps = 19/367 (5%)
Query: 24 QVVTSGLEKSDYITPRIITAC----AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ L+ + P ++T+ A+ + A+++FD++ + V W A+ Y
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 151
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R V + P+ FT VL +C +I L GE + + G ++FV T
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 211
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A ++LY + A +VF +M ++ V W +M+ GY S G A LF +
Sbjct: 212 AAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKP 271
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----------YANNGDVEECKR 249
V+G + + A L Q + ++ W+ L YA G E
Sbjct: 272 DCYAVAGALSACTRLGALDLGRQAIR--MVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 329
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F++M ++++ WN +I G G ++ A + + V ND T + +L +C G
Sbjct: 330 VFQQMRKKDIIVWNAMILGLGMTG-HEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTG 388
Query: 310 AL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTI 367
+ D ++ H + + ++D+ ++ G+++ A + + M + + +
Sbjct: 389 LIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGAL 448
Query: 368 ISGLAMH 374
+ G +H
Sbjct: 449 LGGCKIH 455
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 307/641 (47%), Gaps = 118/641 (18%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS------------- 67
+ ++ SG + +I R+I ++ ++ YAR +FD+I ++V+
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94
Query: 68 --------------------WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVL 107
+NAM Y+ N + LF M++ + P+ +TF VL
Sbjct: 95 LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVL 154
Query: 108 KSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELY---------STGKAIEAAYKV 157
+ + + ++LHC V+K+G V ALI Y + + A K+
Sbjct: 155 GALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKL 214
Query: 158 FGEMDERNV-------------------------------VVWTSMINGYISCGDIVSAR 186
F EM R+ V W +MI+GY G + A
Sbjct: 215 FDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAF 274
Query: 187 CLFE-------------------------------------------LAPERDVILWNTI 203
+F AP+ + + N +
Sbjct: 275 EMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNAL 334
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
++ Y + A+++F++MP++D++SWN +LSGY N ++E K F EMPE+N+ SW
Sbjct: 335 ITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWI 394
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+I G A G E L F RM +G P D + +C+ LG+L + +H
Sbjct: 395 IMISGLAQIGFAEEALKFFNRMKLQG-FEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVR 453
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
GY+ ++ GNALI MYA+CG+++ A +F +M D I+WN +I+ L HG+G A+ L
Sbjct: 454 YGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIEL 513
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLA 443
F EM G +PD I+F+ ++ AC+H GLV+EG YF SM Y + P EHY ++DLL
Sbjct: 514 FEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLC 573
Query: 444 RAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVM 503
RAG+ +EA + ++ MP E A IW LL CR++ N++L A ERL EL+P++ +V+
Sbjct: 574 RAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVL 633
Query: 504 LSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LSN+Y G+W D+A+++ MRD G KK PGCS IEV V
Sbjct: 634 LSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKV 674
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + KH Q+ QVV G E S +IT A+ + A +F + + +SWNAM
Sbjct: 438 LGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAM 497
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG----EELHCLVL 127
Q+ + LF +M K +P+ +F V+ +C ++EG + +H +
Sbjct: 498 IAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYG 557
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGD 181
N + +I+L A +V M E +W ++ I+G I G
Sbjct: 558 VNPDEEHY---ARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLG- 613
Query: 182 IVSARCLFELAPERD--VILWNTIVSGYIDVRNMIEARKLF-DQMPKKDV-ISW------ 231
I +A LFEL P+ D +L + + + +M + RKL D+ KK+ SW
Sbjct: 614 IEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENK 673
Query: 232 -NTMLSGYANNGDVEECKRLFEEM 254
++ L G AN+ +V + E++
Sbjct: 674 VHSFLVGDANHPEVRQIYNYLEQL 697
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 298/531 (56%), Gaps = 11/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + V GLE + ++ A+ + + A ++F+ + ++V+WN M +G QN
Sbjct: 263 QLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNG 322
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
LF M++ A P+ T +L + +N L++G+E+H +++N ++F+ +
Sbjct: 323 LFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVS 382
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPER 195
AL+++Y + + A ++ +VV+ ++MI+GY+ G A R L E +
Sbjct: 383 ALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKP 442
Query: 196 DVILWNTIVSG-----YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ + +++ G + + I L + +K + + ++ YA G ++ +
Sbjct: 443 NAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE-SALMDMYAKCGRLDLSHYI 501
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F +M +++ +WN +I ++ NG E LD F++M EG + N+ TI LSACA L A
Sbjct: 502 FLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKY-NNITISAALSACASLPA 560
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+ + K +H + ++ +ALIDMYAKCG +E A+ VF M K+ ++WN+IIS
Sbjct: 561 IYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISA 620
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
HG ++SL H M+ G PD +TF+ ++ AC H GLVEEG+ FQ M Y I P
Sbjct: 621 YGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAP 680
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EH+ CMVDL +R+G+L +A+ F+ MP + DA IW LL +CRV++NVELA++A + L
Sbjct: 681 RMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQEL 740
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+L+P N +V++SNI GRW V++++ M+D K+PG S ++VN
Sbjct: 741 FKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN 791
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 208/453 (45%), Gaps = 11/453 (2%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
GL Y+ ++ A + AR FD I +++ V WN M +G + V LF
Sbjct: 171 GLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLF 230
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
M+ PN T L C L G +LH L +K G + V L+ +Y+
Sbjct: 231 RNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKC 290
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIV 204
+ ++ A+++F M + ++V W MI+G + G V A LF D I +++
Sbjct: 291 QCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLL 350
Query: 205 SGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
D+ + + +++ + + DV + ++ Y DV + L++ +V
Sbjct: 351 PALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVV 410
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+ +I GY NG+ E L F R L E + PN TI +VL CA + AL + +H Y
Sbjct: 411 IGSTMISGYVLNGMSEEALQMF-RYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGY 469
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
N Y+ V +AL+DMYAKCG ++ + +F M KD +TWN++IS + +G+ A
Sbjct: 470 VLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEA 529
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L LF +M G + IT L AC + + G + + I I ++D
Sbjct: 530 LDLFRQMCMEGIKYNNITISAALSACASLPAIYYG-KEIHGVTIKGPIKADIFAESALID 588
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+ A+ G L A+ + MP + + V W +++ +
Sbjct: 589 MYAKCGNLELALRVFEFMP-DKNEVSWNSIISA 620
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 208/501 (41%), Gaps = 81/501 (16%)
Query: 20 QIQTQVVTSG-LEKSDYIT--PRIITACAQLKQMTYARKMFDKITDQNVVS---WNAMFN 73
QI + V SG L +++ R++ ++ A +F + S WN +
Sbjct: 53 QIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIR 112
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
G+ H V+ + +M A P + T P V+KSC + A+ G +H G
Sbjct: 113 GFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGL 172
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-- 189
+++VG+AL+++Y+ + A F + ER+ V+W M++G I GD+ A LF
Sbjct: 173 ANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRN 232
Query: 190 -------------------------------------ELAPERDVILWNTIVSGYIDVRN 212
+ E +V + NT+++ Y +
Sbjct: 233 MRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQC 292
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ +A +LF+ MP+ D+++WN M+SG C N
Sbjct: 293 LDDAWRLFELMPQDDLVTWNGMISG---------C----------------------VQN 321
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
GLF E F M G P+ T+V++L A L L K VH Y N +V +
Sbjct: 322 GLFVEAFGLFYDMQRSG-ARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFL 380
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+AL+D+Y KC + A +++++ D++ +T+ISG ++G AL +F +
Sbjct: 381 VSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCI 440
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
P+ +T +L C M + G + + + ++D+ A+ GRL +
Sbjct: 441 KPNAVTIASVLPGCASMAALPLG-QQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSH 499
Query: 453 DFVKRMPIEADAVIWANLLGS 473
+M + D V W +++ S
Sbjct: 500 YIFLKMS-QKDEVTWNSMISS 519
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 167/377 (44%), Gaps = 19/377 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K ++ +V + + ++ ++ + + + A+ ++D +VV + M
Sbjct: 356 LNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTM 415
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY N + +F + + PN T VL C + AL G+++H VL+N +
Sbjct: 416 ISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAY 475
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+V +AL+++Y+ ++ ++ +F +M +++ V W SMI+ + G A LF
Sbjct: 476 ERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQ 535
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGD 243
+ N +S + + A ++ K D+ + + ++ YA G+
Sbjct: 536 MCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGN 595
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E R+FE MP++N SWN +I Y +GL E + M EG P+ T + ++S
Sbjct: 596 LELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYK-PDHVTFLALIS 654
Query: 304 ACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
ACA G ++ F Y + C ++D+Y++ G ++ A+ M
Sbjct: 655 ACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFAC----MVDLYSRSGKLDKAIQFIADMPF 710
Query: 359 K-DLITWNTIISGLAMH 374
K D W ++ +H
Sbjct: 711 KPDAGIWGALLHACRVH 727
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 250 LFEEMPERNVFS---WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA-TIVTVLSAC 305
+F +P S WN LI G+ G + + +M + DA T+ V+ +C
Sbjct: 92 VFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSC 151
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LGA+ + VH A G +V VG+AL+ MYA G++ NA D F+ + +D + WN
Sbjct: 152 AALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWN 211
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++ G G GA+ LF M+ +G P+ T L C + G + S+A+
Sbjct: 212 VMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSG-AQLHSLAVK 270
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ P++ ++ + A+ L +A + MP + D V W ++ C
Sbjct: 271 CGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMP-QDDLVTWNGMISGC 318
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 285/534 (53%), Gaps = 17/534 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ V G E ++ ++ ++ + A K+F + ++V SWNAM +G+ QN
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + +MK + T +L C + + + G +H VLK+G +++FV
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI +YS ++ A VF +M+ R++V W S+I Y D +A F+ + P
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP 321
Query: 194 ER-DVILWNTIVSGYIDVR------NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
+ V+ +I S D R + R+ D KDV+ N +++ YA G +
Sbjct: 322 DLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLD----KDVVIGNALVNMYAKLGYMNC 377
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+F+++P ++ SWN L+ GY NGL E +DA+ M PN T V+++ A +
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+GAL +H N +V V LID+Y KCG +E+A+ +F + + WN
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
II+ L +HGRG AL LF +M D ITF+ +L AC+H GLV+EG F M +Y
Sbjct: 498 IIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEY 557
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
I P ++HYGCMVDLL RAG L +A + V+ MPI+ DA IW LL +C++Y N EL LA
Sbjct: 558 GIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLA 617
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+RL E++ +N +V+LSNIY + +W+ V +++ RD G +K PG SS+ V
Sbjct: 618 SDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVV 671
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
++++ +++ Y +GD+ + F+ + ++N+FSWN +I Y G + E ++ ++
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 286 LT---EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+ G + P+ T +L AC L +D K VH G++ +V V +L+ +Y++
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSL--VD-GKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
G+++ A VF M KD+ +WN +ISG +G AGAL + + MK G D IT I
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L C V G+ + + + + ++++ ++ GRL +A +M +
Sbjct: 229 LPVCAQSDDVINGV-LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR- 286
Query: 463 DAVIWANLLG----------SCRVYKNVELAELALERLT 491
D V W +++ + R +K ++L + + LT
Sbjct: 287 DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/469 (37%), Positives = 250/469 (53%), Gaps = 47/469 (10%)
Query: 120 EELHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
+HCL+LK G + TAL+ Y+ + + A ++F EM E+ +V T+M +++
Sbjct: 29 SSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVA 88
Query: 179 CGDIVSARCLFE------LAPER------------------------------------- 195
G A +F + P+
Sbjct: 89 SGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVP 148
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
DV + ++ Y + + +R++FD MP + I+WN ML YA +G V+ +F MP
Sbjct: 149 DVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMP 208
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--VFPNDATIVTVLSACARLGALDF 313
R+V SWN ++ GY G E L F++M++ V PN T+ T+L ACA G L+
Sbjct: 209 RRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLET 268
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF-NSMDTKDLITWNTIISGLA 372
WVH Y E N + + LIDMY KCG I+NA+ VF + KDL +W T+I GLA
Sbjct: 269 GIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLA 328
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
MHGR AL +F M++ G PD +T +G+L AC H GLV+EGL YF SM + I P+I
Sbjct: 329 MHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKI 388
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCM+DLL R GRL EA ++ MP++ + VIW L +C+V+ N+EL ++A E LT
Sbjct: 389 EHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTR 448
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L+P +P VMLS++Y W +AR + M KK PGCSSIE+
Sbjct: 449 LDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELK 497
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 52/396 (13%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
L ++ +++A A L +AR++FD++ +Q +V AM + + + +F
Sbjct: 41 LHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFG 100
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINAL----REGEELHCLVLKNGFRANIFVGTALIELY 145
M P+ + L +C + G+ +H LV+ +G ++FV T LI +Y
Sbjct: 101 DMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVY 160
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ + +VF +M R+ + W +M++ Y G + +A +F P RDV+ WNT+++
Sbjct: 161 GESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLA 220
Query: 206 GYIDVRNMIEARKLFDQM--PKK-----DVISWNTMLSGYANNGDVEE------------ 246
GY EA LF QM P +V + +T+L A G +E
Sbjct: 221 GYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNR 280
Query: 247 ---------------CK--------RLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF 282
CK ++FE+ P ++++FSW +I G A +G + L F
Sbjct: 281 MNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMF 340
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVCVGNALIDMY 340
M G + P+D T+V VL+ACA G +D + + A++ + +ID+
Sbjct: 341 DMMQDNG-ICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFR-ITPKIEHYGCMIDLL 398
Query: 341 AKCGIIENAVDVFNSMDT-KDLITWNTIISGLAMHG 375
+ G ++ A + +M + + W +S +HG
Sbjct: 399 GRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHG 434
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 127/341 (37%), Gaps = 83/341 (24%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I VVTSG+ +++ +I + ++ +R++FD + ++ ++WNAM + YA++
Sbjct: 137 IHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGK 196
Query: 81 HRTVVVLFTQMKKLDAM----------------------------------PNCFTFPIV 106
T +F M + D + PN T +
Sbjct: 197 VDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTI 256
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L +C L G +H + +N + ++ LI++Y +I+ A +V
Sbjct: 257 LGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQV--------- 307
Query: 167 VVWTSMINGYISCGDIVSARCLFELAP-ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
FE AP ++D+ W T++ G +A ++FD M
Sbjct: 308 ----------------------FEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQD 345
Query: 226 ----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
D ++ +L+ A+ G V+E F M + F I Y G ++L
Sbjct: 346 NGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK--FRITPKIEHY---GCMIDLLGR 400
Query: 282 FKRMLTEG----RVFPNDATIV---TVLSACARLGALDFSK 315
R L E R P D V LSAC G ++ K
Sbjct: 401 VGR-LQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGK 440
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 293/544 (53%), Gaps = 39/544 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A+L + +A + F+ + +++VVSWN M +Q+ R + L +M + +
Sbjct: 210 MLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLD 269
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L +C ++ +L G++LH V+++ + + +V +ALIELY+ + + A +VF
Sbjct: 270 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN 329
Query: 160 EMDERNVVVWT-----------------------------------SMINGYISCGDIVS 184
+ +RN V WT ++I+G + D+
Sbjct: 330 SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL 389
Query: 185 ARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
R L L R +++ N+++S Y ++ A +F M ++D++SW +M++ Y+
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 449
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G++ + + F+ M RN +WN ++G Y +G + L + ML++ V P+ T VT
Sbjct: 450 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+ CA +GA + + G NV V NA I MY+KCG I A +F+ ++ KD
Sbjct: 510 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 569
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+++WN +I+G + HG G A F +M + G PD I+++ +L C+H GLV+EG YF
Sbjct: 570 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFD 629
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M + I P +EH+ CMVDLL RAG L EA D + +MP++ A +W LL +C+++ N
Sbjct: 630 MMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGND 689
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELAELA + + EL+ + ++++L+ IY D G+ D A+++ MRD G KK PG S +EV
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 749
Query: 541 NEVV 544
V
Sbjct: 750 ENKV 753
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 197/447 (44%), Gaps = 51/447 (11%)
Query: 30 LEKSDYITPRIIT------ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
L ++D P +IT A+ ++ A ++FD++ ++V SWN + +GY Q
Sbjct: 61 LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120
Query: 84 VVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
+ F M + D++PN FTF V+KSC + +L L K F + V TAL+
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 180
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
+++ ++ A ++F +++ + SM+ GY I A FE ERDV+ WN
Sbjct: 181 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDV-------------------ISWNTMLSG------ 237
+++ + EA L +M +K V + W L
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 238 --------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
YA G +E KR+F + +RN SW LIGG F + ++ F
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 360
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
+M E A + T++S C L + +H +G+ + V N+LI +YAKC
Sbjct: 361 QMRAELMAIDQFA-LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC 419
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G ++NA VF+SM +D+++W ++I+ + G A F M + IT+ +L
Sbjct: 420 GDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMAT----RNAITWNAML 475
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVP 430
A G E+GL + +M + P
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 153/325 (47%), Gaps = 44/325 (13%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFD-QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V L NT++ Y+ + +AR+L + + +VI+ N M++GYA G + + + LF+ MP
Sbjct: 39 VFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP 98
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS- 314
R+V SWN L+ GY F + L+ F M G PN T V+ +C LG + +
Sbjct: 99 RRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAP 158
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGI----------------------------- 345
+ + ++ +++ + G+ V AL+DM+ +CG
Sbjct: 159 QLLGLFWKFD-FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 217
Query: 346 --IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
I++A++ F M +D+++WN +I+ L+ GR AL L EM G D T+ L
Sbjct: 218 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 277
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIE 461
AC + + G Q A +PQI+ Y +++L A+ G EA + +
Sbjct: 278 TACARLFSLGWGK---QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-D 333
Query: 462 ADAVIWANLLGSCRVY----KNVEL 482
++V W L+G Y K+VEL
Sbjct: 334 RNSVSWTVLIGGSLQYECFSKSVEL 358
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 175/437 (40%), Gaps = 75/437 (17%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF-GEMDERN 165
L+SC AL LH ++ G + +F+ L+ Y + A+ A ++ ++ E N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-- 223
V+ M+NGY G + A LF+ P RDV WNT++SGY R ++ + F M
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 224 ---------------------------PKKDVISW-----------NTMLSGYANNGDVE 245
P+ + W ++ + G V+
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 246 ECKRLFEEMPERNVF-------------------------------SWNGLIGGYANNGL 274
RLF ++ +F SWN +I + +G
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
E L M +G V + T + L+ACARL +L + K +H + Q + V +
Sbjct: 251 VREALGLVVEMHRKG-VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
ALI++YAKCG + A VFNS+ ++ ++W +I G + + ++ LF++M+
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 395 DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDF 454
D ++ C + + G S+ + I ++ L A+ G L A +F
Sbjct: 370 DQFALATLISGCFNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EF 427
Query: 455 VKRMPIEADAVIWANLL 471
V E D V W +++
Sbjct: 428 VFSSMSERDIVSWTSMI 444
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 209/318 (65%), Gaps = 1/318 (0%)
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D ++NT+++ YA G + + + LF+EMP RN SW+ ++ GY G E L F RM
Sbjct: 142 DASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQ 201
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
E V P+D +V VL+ACA+ GAL+ KWVH Y + +G + N+ G AL+DMY+KCG +
Sbjct: 202 AED-VRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEV 260
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+ A+DVF M K+++ W T+I GLAMHGRG+ A+ LF +M+++G PD I FIG+LCAC
Sbjct: 261 QLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCAC 320
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
TH GLV++G F SM Y I P+IEHYGCMVDLLAR G L EA + +++MP+E DA+I
Sbjct: 321 THAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALI 380
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W L+ CR +KNVE AE + LEP +V+LSNIY GR I+ MR+
Sbjct: 381 WGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMRE 440
Query: 527 TGFKKLPGCSSIEVNEVV 544
G K PGCS++EVN V+
Sbjct: 441 KGVDKTPGCSTVEVNGVI 458
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 20/244 (8%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ ++ AR +FD++ +N VSW+AM NGY Q R + +F +M+ D P+
Sbjct: 149 LITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPD 208
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
VL +C + AL +G+ +H + +G + N+F GTAL+++YS ++ A VF
Sbjct: 209 DTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFE 268
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVSGYIDV 210
M +NV+ WT+MI G G A LF + +L +G +D
Sbjct: 269 RMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVD- 327
Query: 211 RNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNG 264
+ R+LFD M +K + + M+ A NG + E K + ++MP E + W
Sbjct: 328 ----KGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGA 383
Query: 265 LIGG 268
L+ G
Sbjct: 384 LMAG 387
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 145/356 (40%), Gaps = 55/356 (15%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL----HC 124
+A+ +++ + L+ + + +P T P +LKS A+ L H
Sbjct: 41 DALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHT 100
Query: 125 LVLKNGFRANIFVGTALIELYSTG-KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K G + V ALI +++ ++ + + + ++I Y G +
Sbjct: 101 HAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLA 160
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG------ 237
AR LF+ P R+ + W+ +V+GY+ + EA ++F +M +DV +T+L G
Sbjct: 161 DARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACA 220
Query: 238 ---------------------------------YANNGDVEECKRLFEEMPERNVFSWNG 264
Y+ G+V+ +FE M +NV +W
Sbjct: 221 QHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTT 280
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHV 319
+I G A +G E + F +M + G + P+D + VL AC G +D F V
Sbjct: 281 MIKGLAMHGRGSEAVMLFAQMESSG-IRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRK 339
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
Y G + + ++D+ A+ G + A ++ M + D + W +++G H
Sbjct: 340 Y----GIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFH 391
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 298/550 (54%), Gaps = 14/550 (2%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
T +H E L+ + +H V+ + Y+ ++T A+ + A+K+FD++ D+
Sbjct: 657 TACSHGEVLDFGRQVH---CDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK 713
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
V NAM + + N + L+ +MK + + FT +L C + + G +H
Sbjct: 714 EVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVH 773
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K ++N+ + +AL+ +Y + E A VF M ER+VV W SMI G+
Sbjct: 774 AEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFK 833
Query: 184 SARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----DVISWNTM 234
A LF + D + +++S + + N +E L K DV ++
Sbjct: 834 DALDLFRAMEKEGVKADSDVMTSVISAGLGLEN-VELGHLIHGFAIKRGLESDVFVACSL 892
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ Y+ G E + +F MP +N+ +WN +I Y+ NGL ++ ++L G + +
Sbjct: 893 VDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG-FYLD 951
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+I TVL A + + AL K +H Y ++ V NALIDMY KCG ++ A +F
Sbjct: 952 SVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFE 1011
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+M ++L+TWN++I+G HG A+ LF EMK + PD +TF+ ++ +C+H G+VEE
Sbjct: 1012 NMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEE 1071
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
GL+ FQ M ++Y + P++EHY +VDLL RAGRL +A F++ MPI+AD +W LL +C
Sbjct: 1072 GLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFAC 1131
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R ++N+EL EL + L ++EP +N+V L N+YG++ W A ++ +M+ G KK PG
Sbjct: 1132 RAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPG 1191
Query: 535 CSSIEVNEVV 544
CS IEV V
Sbjct: 1192 CSWIEVKNRV 1201
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 239/498 (47%), Gaps = 22/498 (4%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-----NV 65
L H I +VT GL+ YI +I + + A ++FDK+++ ++
Sbjct: 453 SLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDI 512
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN + +GY + + F +M++L P+ ++ IVL C +++ G ++H
Sbjct: 513 TVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGY 572
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDIVS 184
+++N F + ++ TALI +YS+ A+ +FG+++ R N+V W MI G++ G
Sbjct: 573 IIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEK 632
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN---------TML 235
+ L+ LA + L + +G + E F + DVI N ++L
Sbjct: 633 SLELYSLAKNENCKLVSASFTGAFTACSHGEVLD-FGRQVHCDVIKMNFQDDPYVCTSLL 691
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ YA +G VE+ K++F+++ ++ V N +I + NG ++ L + +M G +
Sbjct: 692 TMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGETPVDS 750
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
TI ++LS C+ +G+ DF + VH Q NV + +AL+ MY KCG E+A VF +
Sbjct: 751 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 810
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
M +D++ W ++I+G + R AL LF M+ G D ++ A + VE G
Sbjct: 811 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELG 870
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
A+ + + +VD+ ++ G AE+ + V + V W +++ SC
Sbjct: 871 -HLIHGFAIKRGLESDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAWNSMI-SCY 927
Query: 476 VYKNVELAELALERLTEL 493
+ L E+++ L ++
Sbjct: 928 SWNG--LPEMSINLLPQI 943
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 237/495 (47%), Gaps = 24/495 (4%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQ 77
QI ++ + E Y+ +I + + A +F K+ ++ N+V+WN M G+ +
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N + L++ K + +F +C L G ++HC V+K F+ + +V
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--LAPER 195
T+L+ +Y+ ++E A KVF ++ ++ V + +MI+ +I G A L+ A E
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 746
Query: 196 DV-------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
V +L V G D + A + M + +V + +L+ Y G E+
Sbjct: 747 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSM-QSNVAIQSALLTMYYKCGSTEDAD 805
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F M ER+V +W +I G+ N F + LD F+ M EG V + + +V+SA L
Sbjct: 806 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEG-VKADSDVMTSVISAGLGL 864
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
++ +H +A G + +V V +L+DMY+K G E+A VF+SM K+L+ WN++I
Sbjct: 865 ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 924
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
S + +G +++L ++ G D ++ +L A + + + +G + + + I
Sbjct: 925 SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT-LHAYQIRLQI 983
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL------GSC----RVYK 478
++ ++D+ + G L A + MP + V W +++ G+C R++K
Sbjct: 984 PSDLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFK 1042
Query: 479 NVELAELALERLTEL 493
++ +E A + +T L
Sbjct: 1043 EMKRSETAPDEVTFL 1057
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 201/441 (45%), Gaps = 48/441 (10%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
FTFP +LK+C ++ L G +H ++ G +++ ++ T+LI +Y + +A +VF +
Sbjct: 442 FTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDK 501
Query: 161 MDER-----NVVVWTSMINGYISCGDIVSARCLF----ELAPERD-----VIL------- 199
M E ++ VW +I+GY G F EL D ++L
Sbjct: 502 MSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLS 561
Query: 200 W---NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
W + GYI +RNM E + ++ Y++ E LF ++
Sbjct: 562 WYMAGRQIHGYI-IRNMFEGDPYLE----------TALIGMYSSCSRPMEAWSLFGKLEN 610
Query: 257 R-NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
R N+ +WN +IGG+ NG++ + L+ + E + A+ +AC+ LDF +
Sbjct: 611 RSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVS-ASFTGAFTACSHGEVLDFGR 669
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHG 375
VH +Q + V +L+ MYAK G +E+A VF+ + K++ N +IS +G
Sbjct: 670 QVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNG 729
Query: 376 RGAGALSLFHEMKNAGEMP-DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEH 434
R AL L+++MK AGE P D T +L C+ +G + G + + + S+ +
Sbjct: 730 RAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVVGSYDFGRT-VHAEVIKRSMQSNVAI 787
Query: 435 YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL-GSC--RVYKNVELAELALERLT 491
++ + + G +A D V E D V W +++ G C R +K+ L L R
Sbjct: 788 QSALLTMYYKCGSTEDA-DSVFYTMKERDVVAWGSMIAGFCQNRRFKDA----LDLFRAM 842
Query: 492 ELEPKNPANFVMLSNIYGDLG 512
E E + VM S I LG
Sbjct: 843 EKEGVKADSDVMTSVISAGLG 863
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 301/541 (55%), Gaps = 24/541 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I A++ ++ ARK+FD +T +N SW ++ +GY + LF QM + N
Sbjct: 133 MIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPE----RN 188
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
++ +V+ + + L+ + NI TA+++ Y AYK+F
Sbjct: 189 VVSWTMVVLGFARNGLMDHAGRFFYLMPEK----NIIAWTAMVKAYLDNGCFSEAYKLFL 244
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
EM ERNV W MI+G + + A LFE P+R+ + W +VSG + + ARK
Sbjct: 245 EMPERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKY 304
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD MP KD+ +W M++ + G ++E ++LF+++PE+NV SWN +I GYA N E L
Sbjct: 305 FDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEAL 364
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ F ML PN+ T+ +V+++C G ++ + H + G++ N + NALI +
Sbjct: 365 NLFVLMLRSC-FRPNETTMTSVVTSCD--GMVELMQ-AHAMVIHLGFEHNTWLTNALITL 420
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
Y+K G + +A VF + +KD+++W +I + HG G AL +F M +G PD +TF
Sbjct: 421 YSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTF 480
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+G+L AC+H+GLV +G F S+ Y++ P+ EHY C+VD+L RAG + EA+D V +P
Sbjct: 481 VGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIP 540
Query: 460 IEA-DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
A D + LLG+CR++ +V +A E+L ELEP + +V+L+N Y G+W + A
Sbjct: 541 PSARDEAVLVALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFA 600
Query: 519 RIKVAMRDTGFKKLPGCSSIEV---NEVVMLGCLSRELDRKSIVRAEANMIKLLPQNNHP 575
+++ MR+ K++PG S I++ N V ++G +S + E + +LL QN P
Sbjct: 601 KVRKRMRERNVKRIPGYSQIQITGKNHVFVVG-------ERSHPQIE-EIYRLLQQNLQP 652
Query: 576 L 576
L
Sbjct: 653 L 653
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 196/431 (45%), Gaps = 53/431 (12%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
IT + ++ ARK+FD++ ++ VS+N+M Y +N+ +F +M +
Sbjct: 72 ITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQ------- 124
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
N+ +A+I+ Y+ ++ A KVF
Sbjct: 125 --------------------------------RNVVAESAMIDGYAKVGRLDDARKVFDN 152
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M +RN WTS+I+GY SCG I A LF+ PER+V+ W +V G+ M A + F
Sbjct: 153 MTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARNGLMDHAGRFF 212
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
MP+K++I+W M+ Y +NG E +LF EMPERNV SWN +I G E +
Sbjct: 213 YLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIMISGCLRANRVDEAIG 272
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
F+ M N + ++S A+ + ++ Y + Y+ ++ A+I
Sbjct: 273 LFESMPDR-----NHVSWTAMVSGLAQNKMIGIAR---KYFDLMPYK-DMAAWTAMITAC 323
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
G+++ A +F+ + K++ +WNT+I G A + AL+LF M + P+ T
Sbjct: 324 VDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCFRPNETTMT 383
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
++ +C G+VE L +M + ++ L +++G L A +++
Sbjct: 384 SVVTSCD--GMVE--LMQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLK- 438
Query: 461 EADAVIWANLL 471
D V W ++
Sbjct: 439 SKDVVSWTAMI 449
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ +G ++E ++LF+EMP+R+ S+N +I Y N E FK M V
Sbjct: 69 NVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVV 128
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
+ ++ A++G LD ++ V N Q N +LI Y CG IE A+
Sbjct: 129 AES-----AMIDGYAKVGRLDDARKVF----DNMTQRNAFSWTSLISGYFSCGKIEEALH 179
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
+F+ M +++++W ++ G A +G A F+ M + I + ++ A G
Sbjct: 180 LFDQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEK----NIIAWTAMVKAYLDNGC 235
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
E F M + + M+ RA R+ EA+ + MP + + V W ++
Sbjct: 236 FSEAYKLFLEMPER-----NVRSWNIMISGCLRANRVDEAIGLFESMP-DRNHVSWTAMV 289
Query: 472 GSCRVYKNVELAE 484
K + +A
Sbjct: 290 SGLAQNKMIGIAR 302
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L Q V+ G E + ++T +IT ++ + AR +F+++ ++VVSW AM Y+
Sbjct: 395 LMQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSN 454
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+ + +F +M P+ TF +L +C + + +G L
Sbjct: 455 HGHGHHALQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRL 499
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 290/515 (56%), Gaps = 18/515 (3%)
Query: 44 CAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF 103
C ++K + K+F+ IT +NVV W +M GY +N+ + +VLF +M++ + N +T+
Sbjct: 201 CGEIKS---SYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTY 257
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
++ +C K+ AL +G+ H ++K+G + + T+L+++Y I A +VF E
Sbjct: 258 GTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 317
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFE----LAPERDVILWNTIVSGYIDVRNMIEARKL 219
++V+WT+MI GY G + A LF+ + + + + +++SG V N+ R +
Sbjct: 318 VDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSI 377
Query: 220 FDQMPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
K + W+T ++ YA + K +FE E+++ +WN +I G++ NG
Sbjct: 378 HGLSIKVGI--WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 435
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY--QGNVCV 332
E L F RM TE V PN T+ ++ SACA LG+L +H Y+ G+ +V V
Sbjct: 436 IHEALFLFHRMNTES-VMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHV 494
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
G AL+D YAKCG E+A +F++++ K+ ITW+ +I G G G+L LF EM +
Sbjct: 495 GTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQ 554
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
P+ TF +L AC+H G+V EG YF SM DY+ P +HY CMVD+LARAG L +A+
Sbjct: 555 KPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 614
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
D +++MPI+ D + L C ++ +L E+ ++++ +L P + + +V++SN+Y G
Sbjct: 615 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 674
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLG 547
RW ++ M+ G K+ G S +E +E + LG
Sbjct: 675 RWSQAKEVRNLMKQRGLSKIAGHSIME-SEFLALG 708
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 229/494 (46%), Gaps = 14/494 (2%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L Q + +GL I ++++ AR +FD+I + + W + Y
Sbjct: 72 LRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCL 131
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N V+ + + K + F LK+C ++ L G+++HC ++K N+ V
Sbjct: 132 NNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNV-V 190
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
T L+++Y+ I+++YKVF ++ RNVV WTSMI GY+ LF E V
Sbjct: 191 LTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSV 250
Query: 198 I----LWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKR 249
+ + T+V +R + + + + K + ++L Y GD+ +R
Sbjct: 251 LGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARR 310
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F E ++ W +I GY +NG E L F++M G + PN TI +VLS C +G
Sbjct: 311 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVG-IKPNCVTIASVLSGCGLVG 369
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ + +H + G + V NAL+ MYAKC +A VF KD++ WN+IIS
Sbjct: 370 NLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 428
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSI 428
G + +G AL LFH M MP+G+T + AC +G + G S + S+ + +
Sbjct: 429 GFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLA 488
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA-ELAL 487
+ ++D A+ G AE+ + E + + W+ ++G + + + EL
Sbjct: 489 SSSVHVGTALLDFYAKCGD-AESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFE 547
Query: 488 ERLTELEPKNPANF 501
E L + + N + F
Sbjct: 548 EMLKKQQKPNESTF 561
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 17/379 (4%)
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
CF ++L C I++LR+ H ++ NG +I + T L+ LY + + A VF
Sbjct: 59 CF---LLLSKCTNIDSLRQA---HGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFD 112
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIE 215
++ E + +W ++ Y + ++L + D I+++ + +V+++
Sbjct: 113 QIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDN 172
Query: 216 ARKLFDQM---PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+K+ Q+ P D + +L YA G+++ ++FE++ RNV W +I GY N
Sbjct: 173 GKKIHCQIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKN 232
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
L+ E L F RM E V N+ T T++ AC +L AL KW H +G + + C+
Sbjct: 233 DLYEEGLVLFNRM-RENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCL 291
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+L+DMY KCG I NA VFN DL+ W +I G +G ALSLF +M G
Sbjct: 292 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGI 351
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
P+ +T +L C +G +E G S +++ I +V + A+ + +A
Sbjct: 352 KPNCVTIASVLSGCGLVGNLELGRS-IHGLSIKVGIW-DTNVANALVHMYAKCYQNRDA- 408
Query: 453 DFVKRMPIEADAVIWANLL 471
+V M E D V W +++
Sbjct: 409 KYVFEMESEKDIVAWNSII 427
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 19/377 (5%)
Query: 16 KHLHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMF 72
+ LHQ ++ SG+E S + ++ + ++ AR++F++ + ++V W AM
Sbjct: 268 RALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 327
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY N + LF +M + PNC T VL C + L G +H L +K G
Sbjct: 328 VGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW 387
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+ V AL+ +Y+ A VF E+++V W S+I+G+ G I A LF
Sbjct: 388 -DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 446
Query: 193 PERDVI--------LWNTIVS-GYIDVRNMIEARKL-FDQMPKKDVISWNTMLSGYANNG 242
V+ L++ S G + + + + A + + V +L YA G
Sbjct: 447 NTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 506
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
D E + +F+ + E+N +W+ +IGGY G L+ F+ ML + + PN++T +VL
Sbjct: 507 DAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQK-PNESTFTSVL 565
Query: 303 SACARLGALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
SAC+ G ++ K + +Y +YN + + ++DM A+ G +E A+D+ M +
Sbjct: 566 SACSHTGMVNEGKKYFSSMYKDYN-FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQP 624
Query: 360 DLITWNTIISGLAMHGR 376
D+ + + G MH R
Sbjct: 625 DVRCFGAFLHGCGMHSR 641
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 295/533 (55%), Gaps = 11/533 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q+ G++ + A+ ++ AR++FD++ ++ V+WNA+ GYA+N
Sbjct: 81 VHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGL 140
Query: 81 HRTVVVLFTQMKKLDA-MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R + + +M++ + P+ T VL +C AL E H +++G + V T
Sbjct: 141 ARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVAT 200
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A+++ Y I AA VF M +N V W +MI+GY GD A LF E V +
Sbjct: 201 AILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDV 260
Query: 200 WNTIVSGYI----DVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
+ V + ++ + E ++ + + + +V N +++ Y+ V+ +F
Sbjct: 261 TDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVF 320
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+E+ R SWN +I G A NG + + F RM E V P+ T+V+V+ A A +
Sbjct: 321 DELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDP 379
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
++W+H Y+ +V V ALIDMYAKCG + A +FNS + +ITWN +I G
Sbjct: 380 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGY 439
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G A+ LF EMK+ G +P+ TF+ +L AC+H GLV+EG YF SM DY + P
Sbjct: 440 GSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPG 499
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYG MVDLL RAG+L EA F+++MP++ ++ +LG+C+++KNVELAE + +++
Sbjct: 500 MEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIF 559
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
EL P+ V+L+NIY + WKDVAR++ AM G +K PG S I++ NE+
Sbjct: 560 ELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEI 612
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 140/358 (39%), Gaps = 72/358 (20%)
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
F M A P TF +LK C L G +H + G + TAL +Y+
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISC-----------------GDIVSARCLFE 190
+ A +VF M R+ V W +++ GY G+ + L
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 191 LAP-----------------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
+ P E V + I+ Y ++ AR +FD MP K+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+SWN M+ GYA NGD E L F RM+
Sbjct: 227 SVSWNAMIDGYAQNGDSR-------------------------------EALALFNRMVE 255
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG V D +++ L AC LG LD VH G NV V NALI MY+KC ++
Sbjct: 256 EG-VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVD 314
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
A VF+ +D + ++WN +I G A +G A+ LF M+ PD T + ++ A
Sbjct: 315 LASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +V GL+ + + +IT ++ K++ A +FD++ + VSWNAM G AQN
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V LFT+M+ + P+ FT V+ + I+ + +H ++ +++V T
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI++Y+ + A +F ER+V+ W +MI+GY S G +A LFE + P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD------VISWNTMLSGYANNGDVEEC 247
L +++S + E R+ F M K+D + + TM+ G ++E
Sbjct: 463 NETTFL--SVLSACSHAGLVDEGREYFTSM-KEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
Query: 248 KRLFEEMP 255
++MP
Sbjct: 520 WAFIQKMP 527
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L AF M + G P T ++L CA G L + VH G AL +
Sbjct: 44 LAAFVAMSSAG-APPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK-NAGEMPDGI 397
MYAKC +A VF+ M +D + WN +++G A +G A+ + M+ GE PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 398 TFIGIL 403
T + +L
Sbjct: 163 TLVSVL 168
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 295/543 (54%), Gaps = 16/543 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + + LH T++ G +D I ++ A+ + A F + +NVV WN M
Sbjct: 388 LFSGQQLHAYTTKL---GFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVM 444
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
Y + R +F QM+ + +PN +T+P +LK+C+++ L GE++H ++K F
Sbjct: 445 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF 504
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG----DIVSARC 187
+ N +V + LI++Y+ ++ A+ + ++VV WT+MI GY + + R
Sbjct: 505 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 564
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGD 243
+ + D + VS ++ + E +++ Q D+ N +++ Y+ G+
Sbjct: 565 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGN 624
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+EE FE+ + +WN L+ G+ +G E L F RM EG + N+ T + +
Sbjct: 625 IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREG-IDSNNFTFGSAVK 683
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
A + + K VH GY V NA+I MYAKCG I +A F + K+ ++
Sbjct: 684 AASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS 743
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN +I+ + HG G+ AL F +M ++ P+ +T +G+L AC+H+GLV++G+ YF+SM
Sbjct: 744 WNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMN 803
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+Y + P+ EHY C+VD+L RAG L+ A DF+ MPIE DA++W LL +C V+KN+E+
Sbjct: 804 TEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIG 863
Query: 484 ELALERLTELEPKNPANFVMLSNIYGDLGRW--KDVARIKVAMRDTGFKKLPGCSSIEVN 541
E A L ELEP++ A +V+LSN+Y +W +D+ R K M++ G KK PG S IEV
Sbjct: 864 EFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQK--MKEKGVKKEPGQSWIEVK 921
Query: 542 EVV 544
+
Sbjct: 922 NSI 924
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 242/527 (45%), Gaps = 24/527 (4%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
+ QI +++ GL KS + +I ++ + AR++FD + ++ SW AM +G ++
Sbjct: 189 VEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSK 248
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
NE + LF M L MP + F VL +C KI +L GE+LH LVLK GF ++ +V
Sbjct: 249 NECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 308
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------L 191
AL+ LY ++ +A +F M +R+ V + ++ING CG A LF+ L
Sbjct: 309 CNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGL 368
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEEC 247
P+ + + ++V + ++L K S + +L+ YA D+E
Sbjct: 369 EPDSNTLA--SLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA 426
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK--RMLTEGRVFPNDATIVTVLSAC 305
F E NV WN ++ Y GL ++ ++F+ R + + PN T ++L C
Sbjct: 427 LNYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 483
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
RLG L+ + +H +Q N V + LIDMYAK G ++ A D+ KD+++W
Sbjct: 484 IRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 543
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
T+I+G + AL+ F +M + G D + + AC + ++EG + A
Sbjct: 544 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACV 602
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA-DAVIWANLLGSCRVYKNVELAE 484
+ +V L ++ G + EA ++ EA D + W L+ + N E A
Sbjct: 603 SGFSSDLPFQNALVTLYSKCGNIEEA--YLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 660
Query: 485 LALERLTELEPKNPANFVMLSNIYG--DLGRWKDVARIKVAMRDTGF 529
R+ E + NF S + + K ++ + TG+
Sbjct: 661 RVFARMNR-EGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 706
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 199/416 (47%), Gaps = 27/416 (6%)
Query: 98 PNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
PN T +L+ C+K N +L EG +LH +LK GF N + L++ Y ++ A K
Sbjct: 65 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALK 124
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI-------- 208
VF EM ER + W MI S CLF +V SG +
Sbjct: 125 VFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSV 184
Query: 209 --DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
DV I AR ++ + K ++ N ++ Y+ NG V+ +R+F+ + ++ SW +I
Sbjct: 185 AFDVVEQIHARIIYQGLGKSTIVC-NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMI 243
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
G + N E + F M G + P +VLSAC ++ +L+ + +H G+
Sbjct: 244 SGLSKNECEVEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
+ V NAL+ +Y G + +A +F++M +D +T+NT+I+GL+ G G A+ LF
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M+ G PD T ++ AC+ G + G + + + ++ +IE G +++L A+
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE--GALLNLYAKC 420
Query: 446 GRLAEAVDFVKRMPIEADAVIW----------ANLLGSCRVYKNVELAELALERLT 491
+ A+++ +E + V+W +L S R+++ +++ E+ + T
Sbjct: 421 SDIETALNYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 475
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 207/453 (45%), Gaps = 19/453 (4%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E LE + LH + V+ G Y+ +++ L + A +F ++ ++ V++N
Sbjct: 285 ESLEIGEQLHGL---VLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYN 341
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLK 128
+ NG +Q + + LF +M+ LD + P+ T ++ +C L G++LH K
Sbjct: 342 TLINGLSQCGYGEKAMELFKRMQ-LDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTK 400
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GF +N + AL+ LY+ IE A F E + NVV+W M+ Y D+ ++ +
Sbjct: 401 LGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 460
Query: 189 F------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGY 238
F E+ P + + +I+ I + ++ ++ Q+ K + + ++ Y
Sbjct: 461 FRQMQIEEIVPNQ--YTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMY 518
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G ++ + ++V SW +I GY + L F++ML G + ++ +
Sbjct: 519 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGL 577
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+SACA L AL + +H A +G+ ++ NAL+ +Y+KCG IE A F +
Sbjct: 578 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEA 637
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D I WN ++SG G AL +F M G + TF + A + +++G
Sbjct: 638 GDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQG-KQ 696
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
++ + E ++ + A+ G +++A
Sbjct: 697 VHAVITKTGYDSETEVCNAIISMYAKCGSISDA 729
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 218/469 (46%), Gaps = 16/469 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +Q++ G + + ++ +++ + A K+FD++ ++ + +WN M A
Sbjct: 89 KLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRS 148
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVG 138
V LF +M + PN TF VL++C + A E++H ++ G + V
Sbjct: 149 LSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVC 208
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI+LYS ++ A +VF + ++ W +MI+G V A LF ++
Sbjct: 209 NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRL 250
S + IE+ ++ +Q+ D N ++S Y + G + + +
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHI 328
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F M +R+ ++N LI G + G + ++ FKRM +G + P+ T+ +++ AC+ G
Sbjct: 329 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDG-LEPDSNTLASLVVACSSDGT 387
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L + +H Y G+ N + AL+++YAKC IE A++ F + ++++ WN ++
Sbjct: 388 LFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVA 447
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ + +F +M+ +P+ T+ IL C +G +E G S + S
Sbjct: 448 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG-EQIHSQIIKTSF-- 504
Query: 431 QIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
Q+ Y C ++D+ A+ G+L A D + R + D V W ++ Y
Sbjct: 505 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQY 552
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 13/288 (4%)
Query: 191 LAPERDVILWNTIVSGYIDVRNMI-EARKLFDQMPK----KDVISWNTMLSGYANNGDVE 245
+ P + W ++ G + + E RKL Q+ K + +L Y GD++
Sbjct: 63 IRPNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLD 120
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
++F+EMPER +F+WN +I A+ L +V F RM+ E V PN+ T VL AC
Sbjct: 121 GALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNEN-VTPNEGTFSGVLEAC 179
Query: 306 ARLG--ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
R G A D + +H Y G + V N LID+Y++ G ++ A VF+ + KD +
Sbjct: 180 -RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
W +ISGL+ + A+ LF +M G MP F +L AC + +E G +
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG-EQLHGLV 297
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ +V L G L A M + DAV + L+
Sbjct: 298 LKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS-QRDAVTYNTLI 344
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 279/533 (52%), Gaps = 78/533 (14%)
Query: 29 GLEKSDYITP-----------RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L +SDY+T +II + + A +F + +N VSWN++ G ++
Sbjct: 45 SLVRSDYLTKPSDEDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISK 104
Query: 78 N-----EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+ E H+ LF ++ + P+ F++ I+L C V F
Sbjct: 105 DPSRMMEAHQ----LFDEIPE----PDTFSYNIMLS---------------CYVRNGNF- 140
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
E A F M ++ W +MI GY G++ AR LF
Sbjct: 141 -------------------EKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLFYSM 181
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
E++ + WN ++SGYI+ ++ +A F P + V++W M++GY VE + +F+
Sbjct: 182 MEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 253 EMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+M ++N+ +WN +I GY N + L F+ ML EG + PN + + + L C+ L AL
Sbjct: 242 DMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSAL 300
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ +H I MY KCG + +A +F +M KD++ WN +ISG
Sbjct: 301 CLGRQIHQ-----------------IVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGY 343
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A HG AL LFHEM+++ PD ITF+ +L AC H GLV+ G++YF SM DY + P+
Sbjct: 344 AQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPR 403
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+HY CMVDLL RAG++ EA+ ++ MP A ++ LLG+CRV+KNVELAE A E+L
Sbjct: 404 PDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 463
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P+N A +V L+NIY W+DVAR++ M+++ K+PG S IE+ +
Sbjct: 464 ELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKI 516
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 154/355 (43%), Gaps = 37/355 (10%)
Query: 135 IFVGTALIELYSTGKA--IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
I VG+ L +S+ + + + Y + DE + +I + GDI A +F
Sbjct: 29 ILVGSCLSSTFSSPEPSLVRSDY-LTKPSDEDQIFPLNKIIATRVRSGDIDGALSVFHGM 87
Query: 193 PERDVILWNTIVSGYI-DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
++ + WN+++ G D M+EA +LFD++P+ D S+N MLS Y NG+ E+ + F
Sbjct: 88 RAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFF 147
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP ++ SWN +I GYA G + F M+ + N+ + ++S G
Sbjct: 148 NRMPFKDAASWNTMITGYARRGEMEKARVLFYSMMEK-----NEVSWNAMISGYIECG-- 200
Query: 312 DFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTII 368
D K H + A + G V A+I Y K +E A +F M K+L+TWN +I
Sbjct: 201 DLEKAAHFFKAAPFRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMI 256
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
SG + R L LF M G P+ L C+ + + G
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGRQ----------- 305
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELA 483
+ QI Y C L A +L EA+ + D V W ++ + N E A
Sbjct: 306 IHQIVMY-CKCGELGDAWKLFEAMK-------KKDVVAWNAMISGYAQHGNAEKA 352
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/615 (32%), Positives = 296/615 (48%), Gaps = 88/615 (14%)
Query: 17 HLHQIQTQVVTSGL----EKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVSWNA 70
HL+ + + T + + +++A A ++ + FD + ++ V NA
Sbjct: 68 HLYTLSPDLATPAVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNA 127
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLD--AMPNCFTFPIVLKSCVKIN--ALREGEELHCLV 126
M + +A+ V +F + D P+ ++F +L + +++ A+ +LHC V
Sbjct: 128 MISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAV 187
Query: 127 LKNGFRANIFVGTALIELYSTGKA----------------------------------IE 152
K G A + V ALI LY A +
Sbjct: 188 HKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVH 247
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----------------------- 189
AA F E+D VVW +MI+GY+ G A LF
Sbjct: 248 AARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACA 307
Query: 190 --------------------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI 229
+ PE + + N +V+ Y + A K+FD M KDV+
Sbjct: 308 NAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVV 367
Query: 230 SWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
SWNT+LSGY +G ++ R+F+EMP ++ SW ++ GY + GL + L F +M +E
Sbjct: 368 SWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSED 427
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
V P D T ++AC LGAL K +H + G++ + GNAL+ MYA+CG +++A
Sbjct: 428 -VKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDA 486
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
VF M D ++WN +IS L HG G AL LF +M G PD I+F+ IL AC H
Sbjct: 487 RLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHA 546
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
GLV++G YF+SM D+ I P +HY ++DLL RAGR+ EA D +K MP E IW
Sbjct: 547 GLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEA 606
Query: 470 LLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGF 529
+L CR+ ++EL A ++L ++ P++ +++LSN Y GRW D AR++ MRD G
Sbjct: 607 ILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGV 666
Query: 530 KKLPGCSSIEVNEVV 544
KK PGCS IEV V
Sbjct: 667 KKEPGCSWIEVGNKV 681
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 25/263 (9%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L KH Q+ +V G E S+ ++T A+ + AR +F + + + VSWNA
Sbjct: 444 ELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNA 503
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCLVLKN 129
M + Q+ R + LF QM P+ +F +L +C + +G + +
Sbjct: 504 MISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDF 563
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VS 184
G LI+L I A + M E +W ++++G GD+ +
Sbjct: 564 GISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYA 623
Query: 185 ARCLFELAPERD---VILWNTIVSG--YID---VRNMIEARKLFDQMPKKDVISW----- 231
A LF++ PE D ++L NT + ++D VR ++ R + K+ SW
Sbjct: 624 ADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGV----KKEPGCSWIEVGN 679
Query: 232 --NTMLSGYANNGDVEECKRLFE 252
+ L G + D E R E
Sbjct: 680 KVHVFLVGDTKHPDAHEVYRFLE 702
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/469 (37%), Positives = 250/469 (53%), Gaps = 47/469 (10%)
Query: 120 EELHCLVLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
+HCL+LK G + TAL+ Y+ + + A ++F EM E+ +V T+M +++
Sbjct: 29 SSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVA 88
Query: 179 CGDIVSARCLFE------LAPER------------------------------------- 195
G A +F + P+
Sbjct: 89 SGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVP 148
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
DV + ++ Y + + +R++FD MP + I+WN ML YA +G V+ +F MP
Sbjct: 149 DVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMP 208
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--VFPNDATIVTVLSACARLGALDF 313
R+V SWN ++ GY G E L F++M++ V PN T+ T+L ACA G L+
Sbjct: 209 RRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLET 268
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF-NSMDTKDLITWNTIISGLA 372
WVH Y E N + + LIDMY KCG I+NA+ VF + KDL +W T+I GLA
Sbjct: 269 GIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLA 328
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
MHGR AL +F M++ G PD +T +G+L AC H GLV+EGL YF SM + I P+I
Sbjct: 329 MHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKI 388
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGCM+DLL R GRL EA ++ MP++ + VIW L +C+V+ N+EL ++A E LT
Sbjct: 389 EHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTR 448
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
L+P +P VMLS++Y W +AR + M KK PGCSSIE+
Sbjct: 449 LDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELK 497
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 52/396 (13%)
Query: 30 LEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFT 89
L ++ +++A A L +AR++FD++ +Q +V AM + + + +F
Sbjct: 41 LHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFG 100
Query: 90 QMKKLDAMPNCFTFPIVLKSCVKINAL----REGEELHCLVLKNGFRANIFVGTALIELY 145
M P+ + L +C + G+ +H LV+ +G ++FV T LI +Y
Sbjct: 101 DMVADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVY 160
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ + +VF +M R+ + W +M++ Y G + +A +F P RDV+ WNT+++
Sbjct: 161 GESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLA 220
Query: 206 GYIDVRNMIEARKLFDQM--PKK-----DVISWNTMLSGYANNGDVEE------------ 246
GY EA LF QM P +V + +T+L A G +E
Sbjct: 221 GYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNR 280
Query: 247 ---------------CK--------RLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAF 282
CK ++FE+ P ++++FSW +I G A +G + L F
Sbjct: 281 MNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMF 340
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALD--FSKWVHVYAEYNGYQGNVCVGNALIDMY 340
M G + P+D T+V VL+ACA G +D + + A++ + +ID+
Sbjct: 341 DMMQDNG-ICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFR-ITPKIEHYGCMIDLL 398
Query: 341 AKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
+ G ++ A + +M + + W +S +HG
Sbjct: 399 GRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHG 434
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 127/341 (37%), Gaps = 83/341 (24%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I VVTSG+ +++ +I + ++ +R++FD + ++ ++WNAM + YA++
Sbjct: 137 IHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYARHGK 196
Query: 81 HRTVVVLFTQMKKLDAM----------------------------------PNCFTFPIV 106
T +F M + D + PN T +
Sbjct: 197 VDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTI 256
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L +C L G +H + +N + ++ LI++Y +I+ A +V
Sbjct: 257 LGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQV--------- 307
Query: 167 VVWTSMINGYISCGDIVSARCLFELAP-ERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
FE AP ++D+ W T++ G +A ++FD M
Sbjct: 308 ----------------------FEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQD 345
Query: 226 ----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
D ++ +L+ A+ G V+E F M + F I Y G ++L
Sbjct: 346 NGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAK--FRITPKIEHY---GCMIDLLGR 400
Query: 282 FKRMLTEG----RVFPNDATIV---TVLSACARLGALDFSK 315
R L E R P D V LSAC G ++ K
Sbjct: 401 IGR-LQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGK 440
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 304/561 (54%), Gaps = 37/561 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ--NVVSWNAMFNGYAQ 77
Q+ + GL + ++ A + YA ++FD++ + +VVSW A+ + Y+
Sbjct: 73 QVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSS 132
Query: 78 NEFHRTVVVLFTQMKKL---DAMPNCFTFPIVLKSCVKI-------NALREGEELHCLVL 127
N F +M+ + D C + L + V N LR G +H LV+
Sbjct: 133 NGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVV 192
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMINGYISCGDIVSA 185
K GF + +G +++ +YS K + A++VF +++R+VV W S+I+G+ G+ A
Sbjct: 193 KYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERA 252
Query: 186 RCLFE---------LAPERDVI---LWNTIVSGYIDVRNMIE---ARKLFDQMPKKDVIS 230
FE + P R + L + G ++ + + + + + KDV+
Sbjct: 253 LRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVV 312
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG- 289
+L +A G++ + +F+ + +NV W+ +I GY E L F++ML EG
Sbjct: 313 LTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGN 372
Query: 290 ----RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
V PN T+V+V++AC+RLGA + +H YA G + + +ALIDM AKCG
Sbjct: 373 MVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGD 432
Query: 346 IENAVDVFNSMD--TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
IE+ VF+ MD T+ +++W+++I +HG G AL LF EM+ G P+ IT+I +L
Sbjct: 433 IEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVL 492
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC+H GLVE+G S F SM DY + P +HY C+VDLL RAG L EA + + MPI+AD
Sbjct: 493 SACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKAD 552
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
+W +LL +C ++ N +L E+ +++ L+ + + V+L+N+Y D GRW DV R++V
Sbjct: 553 LALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVE 612
Query: 524 MRDTGFKKLPGCSSIEV-NEV 543
+R +G +K+PG S IE+ NEV
Sbjct: 613 LRRSGLRKIPGQSFIEIGNEV 633
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 224/507 (44%), Gaps = 112/507 (22%)
Query: 59 KITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR 117
I+ ++ WN++ A QN +T + FT+M+ N FTFP +LK+C + L
Sbjct: 12 SISHKDTFHWNSLIAKNATQNP--QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLL 69
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER--NVVVWTSMING 175
++H + + G A+ F AL++ Y A +VF EM E +VV WT++I+
Sbjct: 70 PTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISA 129
Query: 176 YIS-------------------------CG-DIVS-------------ARCLFELAPERD 196
Y S CG D+VS + CL +
Sbjct: 130 YSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHG 189
Query: 197 VI----------LWNTIVSGYIDVRNMIEARKLFDQMP--KKDVISWNTMLSGYANNGDV 244
++ L N++V Y +++ A ++F+ +P ++DV+SWN+++SG+ NG+
Sbjct: 190 LVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEA 249
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--VFPNDATIVTVL 302
E R FE+ M++EG V PN T++ +L
Sbjct: 250 ERALRTFED-------------------------------MVSEGTSAVEPNRVTVIALL 278
Query: 303 SACARLGALDFSKWVHVYAEYNGYQ----GNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+CA LG ++ S WVH Y +V V AL+DM+A+CG + A ++F+ ++
Sbjct: 279 KSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEG 338
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM------PDGITFIGILCACTHMGLV 412
K+++ W+ +I+G AL LF +M G M P+ +T + ++ AC+ +
Sbjct: 339 KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL--- 395
Query: 413 EEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLARAGRLAEAVDFVKRMPIEADAVI-W 467
G S SM Y++ ++ ++D+ A+ G + M V+ W
Sbjct: 396 --GASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSW 453
Query: 468 ANLLGSCRVYKNVELAELALERLTELE 494
++++G+ ++ + ALE +E+
Sbjct: 454 SSMIGAEGIHGE---GKRALELFSEMR 477
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD--QN 64
A +L ++ I V +GL++ I +I CA+ + + R++F ++ + +
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
VVSW++M + + + LF++M+ PN T+ VL +C + +G+
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509
Query: 125 LVLKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYI 177
+ K+ G L++L ++ A+ V M + ++ +W S+ ++G
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNC 569
Query: 178 SCGDIVSARCL 188
G+IV + L
Sbjct: 570 KLGEIVEKKIL 580
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 293/544 (53%), Gaps = 39/544 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A+L + +A + F+ + +++VVSWN M +Q+ R + L +M + +
Sbjct: 210 MLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLD 269
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T+ L +C ++ +L G++LH V+++ + + +V +ALIELY+ + + A +VF
Sbjct: 270 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN 329
Query: 160 EMDERNVVVWT-----------------------------------SMINGYISCGDIVS 184
+ +RN V WT ++I+G + D+
Sbjct: 330 SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL 389
Query: 185 ARCLFEL----APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYAN 240
R L L R +++ N+++S Y ++ A +F M ++D++SW +M++ Y+
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 449
Query: 241 NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT 300
G++ + + F+ M RN +WN ++G Y +G + L + ML++ V P+ T VT
Sbjct: 450 IGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+ CA +GA + + G NV V NA I MY+KCG I A +F+ ++ KD
Sbjct: 510 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 569
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
+++WN +I+G + HG G A F +M + G PD I+++ +L C+H GLV+EG YF
Sbjct: 570 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFD 629
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
M + I P +EH+ CMVDLL RAG L EA D + +MP++ A +W LL +C+++ N
Sbjct: 630 MMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGND 689
Query: 481 ELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
ELAELA + + EL+ + ++++L+ IY D G+ D A+++ MRD G KK PG S +EV
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 749
Query: 541 NEVV 544
V
Sbjct: 750 ENKV 753
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 198/447 (44%), Gaps = 51/447 (11%)
Query: 30 LEKSDYITPRIIT------ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRT 83
L ++D P +IT A+ ++ A ++FD++ ++V SWN + +GY Q
Sbjct: 61 LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120
Query: 84 VVVLFTQMKKL-DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALI 142
+ F M + D++PN FTF V+KSC + +L L K F + V TAL+
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 180
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
+++ ++ A ++F +++ + SM+ GY I A FE ERDV+ WN
Sbjct: 181 DMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNM 240
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDV-------------------ISWNTMLSG------ 237
+++ + EA L +M +K V + W L
Sbjct: 241 MIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL 300
Query: 238 --------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
YA G +E KR+F + +RN SW LIGG F + ++ F
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFN 360
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
+M E A + T++S C L + +H +G+ + V N+LI +YAKC
Sbjct: 361 QMRAELMAIDQFA-LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKC 419
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G ++NA VF+SM +D+++W ++I+ + G A F M + + IT+ +L
Sbjct: 420 GDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM----DTRNAITWNAML 475
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVP 430
A G E+GL + +M + P
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQKDVTP 502
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 44/325 (13%)
Query: 197 VILWNTIVSGYIDVRNMIEARKLFD-QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
V L NT++ Y + +AR+L + + +VI+ N M++GYA G + + + LF+ MP
Sbjct: 39 VFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP 98
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS- 314
R+V SWN L+ GY F + L+ F M G PN T V+ +C LG + +
Sbjct: 99 RRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAP 158
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGI----------------------------- 345
+ + ++ +++ + G+ V AL+DM+ +CG
Sbjct: 159 QLLGLFWKFD-FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 217
Query: 346 --IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
I++A++ F M +D+++WN +I+ L+ GR AL L EM G D T+ L
Sbjct: 218 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 277
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY--GCMVDLLARAGRLAEAVDFVKRMPIE 461
AC + + G Q A +PQI+ Y +++L A+ G EA + +
Sbjct: 278 TACARLFSLGWGK---QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-D 333
Query: 462 ADAVIWANLLGSCRVY----KNVEL 482
++V W L+G Y K+VEL
Sbjct: 334 RNSVSWTVLIGGSLQYECFSKSVEL 358
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 194/491 (39%), Gaps = 78/491 (15%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF-GEMDER 164
L+SC AL LH ++ G + +F+ L+ Y + A+ A ++ ++ E
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM- 223
NV+ M+NGY G + A LF+ P RDV WNT++SGY R ++ + F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 224 ----------------------------PKKDVISW-----------NTMLSGYANNGDV 244
P+ + W ++ + G V
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 245 EECKRLFEEMPERNVF-------------------------------SWNGLIGGYANNG 273
+ RLF ++ +F SWN +I + +G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVG 333
E L M +G V + T + L+ACARL +L + K +H + Q + V
Sbjct: 250 RVREALGLVVEMHRKG-VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA 308
Query: 334 NALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM 393
+ALI++YAKCG + A VFNS+ ++ ++W +I G + + ++ LF++M+
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 394 PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
D ++ C + + G S+ + I ++ L A+ G L A +
Sbjct: 369 IDQFALATLISGCFNRMDLCLG-RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-E 426
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGR 513
FV E D V W +++ + Y + A E ++ +N + + Y G
Sbjct: 427 FVFSSMSERDIVSWTSMITA---YSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGA 483
Query: 514 WKDVARIKVAM 524
+D ++ AM
Sbjct: 484 EEDGLKMYSAM 494
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 295/529 (55%), Gaps = 44/529 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ +VTSG+ + I ++++ + ++ ARK+FD++ +++ W M A+ +
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVSFYVECGKVLDARKVFDEMPKRDISGWVVMIGACARYGY 97
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++ + +F +M K + F P +LK+ + G+ +HCLVLK F ++ F+ ++
Sbjct: 98 YQESLDIFREMNKEGLKLDVFIVPSLLKASRNLLDREFGKMIHCLVLKCSFESDAFIVSS 157
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
LI++YS FGE +V+AR +F+ E+D++++
Sbjct: 158 LIDMYSK----------FGE---------------------VVNARKVFDDLGEQDLVVF 186
Query: 201 NTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFE---- 252
N ++SGY + EA L M K D+I+WN ++SG+++ G+ E+ + E
Sbjct: 187 NAMISGYANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEEKVSEILELMCL 246
Query: 253 --EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
MP+ V SW +I G +N + DAFK+MLT G ++PN ATI T+L AC L
Sbjct: 247 DGYMPD--VVSWTSIISGLVHNFQNEKAFDAFKQMLTHG-LYPNSATITTLLPACTTLAN 303
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+ K +H Y+ G + + V +AL+DMY KCG I A+ +F K +T+N++I
Sbjct: 304 MKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFC 363
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HG A+ LF +M+ GE D +TF IL AC+H GL + G + F M Y I P
Sbjct: 364 YANHGLSDKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEP 423
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHY CMVDLL RAG+L EA + +K M +E D +W LLG+CR + N+ELA +A +RL
Sbjct: 424 RLEHYACMVDLLGRAGKLVEAYEMMKTMRMEPDLFVWGALLGACRNHGNMELARIAAKRL 483
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
ELEP+N N ++L+++Y D+G W++V R+K ++ F++ G S +E
Sbjct: 484 AELEPENSGNGLLLTSLYADVGSWENVIRMKKMIKKKRFRRFLGSSWVE 532
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L KH +I V +GLE ++ ++ + ++ A +F K + V++N+M
Sbjct: 301 LANMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSM 360
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNG 130
YA + V LF QM+ + TF +L +C G+ L H + K
Sbjct: 361 IFCYANHGLSDKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYR 420
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI----VSA 185
+ +++L + AY++ M E ++ VW +++ + G++ ++A
Sbjct: 421 IEPRLEHYACMVDLLGRAGKLVEAYEMMKTMRMEPDLFVWGALLGACRNHGNMELARIAA 480
Query: 186 RCLFELAPE 194
+ L EL PE
Sbjct: 481 KRLAELEPE 489
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 267/454 (58%), Gaps = 24/454 (5%)
Query: 106 VLKSCVKI-----NALREGEELHCLVLKNGFR-ANIFVGTALI-ELYSTGKAIEAAYKVF 158
+LK C+ + ++ + ++H +++G N +G LI L S + A+++F
Sbjct: 38 ILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIF 97
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTI---VSGYIDVR 211
++ N+ W +MI GY + + A L+ E D + + ++ +DVR
Sbjct: 98 SQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVR 157
Query: 212 -----NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
+ I R F+ + V NT++ YA G E +LFE M ERN+ +WN +I
Sbjct: 158 EGEKVHSIAIRNGFESL----VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVI 213
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GYA NG E L F+ M G V P+ T+V++LSACA LGAL + HVY G
Sbjct: 214 NGYALNGRPNEALTLFREMGLRG-VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
GN+ GNAL+D+YAKCG I A VF+ M+ K +++W ++I GLA++G G AL LF E
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
++ G MP ITF+G+L AC+H G+V+EG YF+ M +Y IVP+IEHYGCMVDLL RAG
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 392
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ +A +F++ MP++ +AV+W LLG+C ++ ++ L E+A +L +LEPK+ ++V+LSN
Sbjct: 393 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSN 452
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+Y RW DV +++ M G KK PG S +E+
Sbjct: 453 LYASEQRWSDVHKVRRTMLREGVKKTPGHSLVEL 486
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 193/373 (51%), Gaps = 16/373 (4%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H I+ V + + Y+ +++ C+ M+YA ++F +I + N+ +WN M GYA
Sbjct: 60 HAFSIRHGVPLTNPDMGKYLIFTLLSFCSP---MSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
++E + L+ QM P+ T+P +LK+ K+ +REGE++H + ++NGF + +F
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LA 192
V L+ +Y+ E+A+K+F M ERN+V W S+INGY G A LF
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECK 248
E D +++S ++ + R+ M K ++ + N +L YA G + +
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
++F+EM E++V SW LI G A NG E L+ FK + +G + P++ T V VL AC+
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG-LMPSEITFVGVLYACSHC 355
Query: 309 GALD--FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWN 365
G +D F + + EY G + ++D+ + G+++ A + +M + + + W
Sbjct: 356 GMVDEGFDYFKRMKEEY-GIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 414
Query: 366 TIISGLAMHGRGA 378
T++ +HG A
Sbjct: 415 TLLGACTIHGHLA 427
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 304/561 (54%), Gaps = 37/561 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ--NVVSWNAMFNGYAQ 77
Q+ + GL + ++ A + YA ++FD++ + +VVSW A+ + Y+
Sbjct: 73 QVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSS 132
Query: 78 NEFHRTVVVLFTQMKKL---DAMPNCFTFPIVLKSCVKI-------NALREGEELHCLVL 127
N F +M+ + D C + L + V N LR G +H LV+
Sbjct: 133 NGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVV 192
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMINGYISCGDIVSA 185
K GF + +G +++ +YS K + A++VF +++R+VV W S+I+G+ G+ A
Sbjct: 193 KYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERA 252
Query: 186 RCLFE---------LAPERDVI---LWNTIVSGYIDVRNMIE---ARKLFDQMPKKDVIS 230
FE + P R + L + G ++ + + + + + KDV+
Sbjct: 253 LRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVV 312
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG- 289
+L +A G++ + +F+ + +NV W+ +I GY E L F++ML EG
Sbjct: 313 LTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGN 372
Query: 290 ----RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
V PN T+V+V++AC+RLGA + +H YA G + + +ALIDM AKCG
Sbjct: 373 MVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGD 432
Query: 346 IENAVDVFNSMD--TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
IE+ VF+ MD T+ +++W+++I +HG G AL LF EM+ G P+ IT+I +L
Sbjct: 433 IEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVL 492
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC+H GLVE+G S F SM DY + P +HY C+VDLL RAG L EA + + MPI+AD
Sbjct: 493 SACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKAD 552
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
+W +LL +C ++ N +L E+ +++ L+ + + V+L+N+Y D GRW DV R++V
Sbjct: 553 LALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVE 612
Query: 524 MRDTGFKKLPGCSSIEV-NEV 543
+R +G +K+PG S IE+ NEV
Sbjct: 613 LRRSGLRKIPGQSFIEIGNEV 633
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 224/507 (44%), Gaps = 112/507 (22%)
Query: 59 KITDQNVVSWNAMFNGYA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR 117
I+ ++ WN++ A QN +T + FT+M+ N FTFP +LK+C + L
Sbjct: 12 SISHKDTFHWNSLIAKNATQNP--QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLL 69
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER--NVVVWTSMING 175
++H + + G A+ F AL++ Y A +VF EM E +VV WT++I+
Sbjct: 70 PTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISA 129
Query: 176 YIS-------------------------CG-DIVS-------------ARCLFELAPERD 196
Y S CG D+VS + CL +
Sbjct: 130 YSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHG 189
Query: 197 VI----------LWNTIVSGYIDVRNMIEARKLFDQMP--KKDVISWNTMLSGYANNGDV 244
++ L N++V Y +++ A ++F+ +P ++DV+SWN+++SG+ NG+
Sbjct: 190 LVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEA 249
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR--VFPNDATIVTVL 302
E R FE+ M++EG V PN T++ +L
Sbjct: 250 ERALRTFED-------------------------------MVSEGTSAVEPNRVTVIALL 278
Query: 303 SACARLGALDFSKWVHVYAEYNGYQ----GNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+CA LG ++ S WVH Y +V V AL+DM+A+CG + A ++F+ ++
Sbjct: 279 KSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEG 338
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM------PDGITFIGILCACTHMGLV 412
K+++ W+ +I+G AL LF +M G M P+ +T + ++ AC+ +
Sbjct: 339 KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL--- 395
Query: 413 EEGLSYFQSMAMDYSIVPQIEH----YGCMVDLLARAGRLAEAVDFVKRMPIEADAVI-W 467
G S SM Y++ ++ ++D+ A+ G + M V+ W
Sbjct: 396 --GASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSW 453
Query: 468 ANLLGSCRVYKNVELAELALERLTELE 494
++++G+ ++ + ALE +E+
Sbjct: 454 SSMIGAEGIHGE---GKRALELFSEMR 477
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD--QN 64
A +L ++ I V +GL++ I +I CA+ + + R++F ++ + +
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
VVSW++M + + + LF++M+ PN T+ VL +C + +G+
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509
Query: 125 LVLKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYI 177
+ K+ G L++L ++ A+ V M + ++ +W S+ ++G
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNC 569
Query: 178 SCGDIVSARCL 188
G+IV + L
Sbjct: 570 KLGEIVEKKIL 580
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 250/448 (55%), Gaps = 65/448 (14%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
PN FT V+K+C I +L +G++ H ++K GF
Sbjct: 8 PNQFTLSTVVKACASIASLEQGKQAHNYIIKMGF-------------------------- 41
Query: 158 FGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
E +VVV T++++ Y CG ++ +A
Sbjct: 42 -----ESDVVVQTALVHMYARCG-------------------------------SLEDAG 65
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE 277
+FD+M ++ +WN M++G+A N D+++ +LF EM ER+V SW +I GYA NG E
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 278 VLDAFKRMLTEGRVFPNDATIV-TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNAL 336
L+ F +M G +D I+ +VLSACA L AL+ + H Y +G+ ++ VG+AL
Sbjct: 126 SLNVFNQMRKTG--MKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 337 IDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDG 396
+DMYAK G +E+A VF+ M ++ ++WN+II+G A HGRG A+ LF +M AG P+
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243
Query: 397 ITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVK 456
I+F+G+L AC+H GLV EG YF M +Y IVP + HY CM+DLL RAG L EA +F+
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303
Query: 457 RMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKD 516
MP+E D +W LLG+CR++ N ELA+ E L +E + +V+LSNIY G+W D
Sbjct: 304 GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDD 363
Query: 517 VARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A+++ M+D G K PG S IEV ++
Sbjct: 364 AAKVRKLMKDRGVMKQPGYSWIEVKTIM 391
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
E+S +IT AQ + M A K+F ++++++VVSW A+ GYAQN + + +F Q
Sbjct: 73 ERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQ 132
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M+K + F VL +C + AL G + H V+++GF +I VG+AL+++Y+ +
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS 192
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVSG 206
+E A +VF +M +RN V W S+I G G A LFE + + I + ++S
Sbjct: 193 MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252
Query: 207 YIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVF 260
+ E R F+ M + DV + M+ G ++E + MP E +V
Sbjct: 253 CSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVS 312
Query: 261 SWNGLIG 267
W L+G
Sbjct: 313 VWGALLG 319
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
V PN T+ TV+ ACA + +L+ K H Y G++ +V V AL+ MYA+CG +E+A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 351 DVFNS-------------------------------MDTKDLITWNTIISGLAMHGRGAG 379
VF+ M +D+++W +I+G A +G G
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
+L++F++M+ G D +L AC + +E G F + + I +V
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ-FHAYVVQSGFALDIVVGSALV 184
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK-NP 498
D+ A++G + +A +MP + + V W +++ C + A L E++ + K N
Sbjct: 185 DMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243
Query: 499 ANFV 502
+FV
Sbjct: 244 ISFV 247
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q VV SG + ++ A+ M A ++FDK+ +N VSWN++ G AQ+
Sbjct: 163 QFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHG 222
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
V+LF QM + PN +F VL +C + EG L+ +N G ++
Sbjct: 223 RGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHY 282
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMI 173
T +I+L ++ A M E +V VW +++
Sbjct: 283 TCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALL 318
>gi|414589212|tpg|DAA39783.1| TPA: hypothetical protein ZEAMMB73_012385 [Zea mays]
Length = 590
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 294/582 (50%), Gaps = 85/582 (14%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITAC-----AQLKQMTYARKMFDKITDQNVV 66
L++ +HL Q Q++ GL S + P +++A + +Q A + + + V
Sbjct: 12 LKSPRHLLQTHAQLLARGLSASPRLLPVLVSAAFSVSPSSPRQAAAAAILGAAGSGASTV 71
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAM----------PNCFTFPIVLKSCVKINAL 116
+ N + A A PN FTF +L++C + L
Sbjct: 72 AHNTLIERLAGIGGGGGGGGRGCSAADALAAYAAMRAAGVYPNGFTFTFLLRACESLRRL 131
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELY---STGKAIEAAYKVFGEMDERNVVVWTSMI 173
+H +++ GF +++ V AL+ +Y S + A +VF EM R+VV W S++
Sbjct: 132 FLCRCVHGQIVRCGFGSDVVVQNALLNVYYKCSDPGDVGIARQVFDEMANRDVVSWNSIV 191
Query: 174 NGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
Y+S GD A LFE PER+V+ WNTIV+ + +M+ AR +FD+MP +D ISWN
Sbjct: 192 GVYMSNGDAAGAMELFEAMPERNVVSWNTIVAAFTRAGDMVSARAVFDRMPIRDAISWNL 251
Query: 234 MLSGYANNGDVE-------------------------------ECKRLFEEMPERNVFSW 262
M+SGYA +G+VE + LF++MP++N+ SW
Sbjct: 252 MISGYATSGNVESAWSLFDIMDRKDVVSWTAMVSAYAKIGELDSARVLFDQMPDKNLVSW 311
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N +I GY +N + + L F++M+ EGR P++AT+V+V+SACA+LG++++ W+ Y
Sbjct: 312 NAMITGYNHNLRYDDALCTFQQMMLEGRFMPDEATLVSVVSACAQLGSVEYCNWISSYIS 371
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
+ V +GNAL+DM+AKCG + A VFN M T+ ITW T+ISG A +G+ AL
Sbjct: 372 KSNTHITVALGNALVDMFAKCGDVGRAHLVFNKMKTRCTITWTTMISGFAYNGQFREALL 431
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLL 442
++++M G D F+ L AC H GL++EG S F M IVP++EHYGC+VDLL
Sbjct: 432 VYNDMCREGVTLDDTVFVAALGACAHGGLLQEGWSIFNQMVEYCRIVPRMEHYGCIVDLL 491
Query: 443 ARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFV 502
RA EL+E ++ E+EP N + V
Sbjct: 492 GRA-----------------------------------ELSEYVSTKIVEMEPFNSSYQV 516
Query: 503 MLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
++SN GRW V + MRD G +K PG S I+V NEV
Sbjct: 517 LVSNCSALEGRWDSVMDARRTMRDCGVEKTPGSSLIQVGNEV 558
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 278/537 (51%), Gaps = 73/537 (13%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV---VSWNA 70
T HL Q T ++ L ++D R I A L +Y+ +F ++ V N
Sbjct: 25 TLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVYNNI 84
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
++ Y+ N + V +F +++L + ++ P VLKS V +N G+++HC+ + G
Sbjct: 85 IYALYSSNA--KLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTG 142
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
N+ V ++LI++Y SC D+ SAR
Sbjct: 143 LDKNVSVCSSLIQMY--------------------------------SCYDVCSAR---- 166
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
KLFD+ + N M+ Y GDV ++L
Sbjct: 167 ---------------------------KLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKL 198
Query: 251 FEEMPERN--VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
F+ M ER+ VFSW +I GY E + F+RM E V P++ I+ VLSACA L
Sbjct: 199 FDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLEN-VKPDEIAILAVLSACADL 257
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
GAL +W+H Y E + V + N+LIDMYAK G I A+++F +M K +ITW T+I
Sbjct: 258 GALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMI 317
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+GLA+HG G AL +F M+ + P+ +TFI IL AC+H+GLVE G YF SM Y
Sbjct: 318 AGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYG 377
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P+IEHYGCM+DLL RAG L EA + V RMP EA+A IW +LL + + ELAE AL
Sbjct: 378 IEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEAL 437
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
LT LEP + N+ +LSN Y LGRW + ++ M+D G +K+PG S IEVN +V
Sbjct: 438 RHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIV 494
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 264/496 (53%), Gaps = 34/496 (6%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++TA Q Q+ +FDK+ ++ VSWN M +G+ + + F QM + +PN
Sbjct: 46 VMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPN 105
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+T +L++ + ++H L G N+FVG++LI Y+ K EA + F
Sbjct: 106 DYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFN 165
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKL 219
++ ++V W ++++ Y+ G V A+ F+ P+R++I W T+V+GY+ + + +AR +
Sbjct: 166 DISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSV 225
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
FD M +++V+SW M+SGY N + +LF M
Sbjct: 226 FDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLM------------------------- 260
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
FK TE R PN T +VL ACA +L +H +G +V +L+DM
Sbjct: 261 --FK---TETR--PNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDM 313
Query: 340 YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITF 399
YAKCG ++ A VF S+ K+L++WN II G A HG AL F MK G PD +TF
Sbjct: 314 YAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVG-TPDEVTF 372
Query: 400 IGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ +L AC H GLVEEG +F M Y I ++EHY CMVDL RAGR EA + +K MP
Sbjct: 373 VNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMP 432
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVAR 519
E D V+W LL +C ++ N+EL E A ER+ LE +P ++ +LS I G+ G W V
Sbjct: 433 FEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNE 492
Query: 520 IKVAMRDTGFKK-LPG 534
++ M++ G KK PG
Sbjct: 493 LRDTMKERGIKKQTPG 508
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 160/351 (45%), Gaps = 53/351 (15%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ +I A A LK+ + F+ I+ ++V SWNA+ + Y + +
Sbjct: 142 FVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYME------LGKFVDAQTAF 195
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D MP + NI T L+ Y K + A
Sbjct: 196 DQMP---------------------------------QRNIISWTTLVNGYVKNKQVNKA 222
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDV 210
VF +M ERNVV WT+MI+GY+ V A LF L + + +++++
Sbjct: 223 RSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGS 282
Query: 211 RNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
++I +L + K DVI +++ YA GD++ +FE + ++N+ SWN +I
Sbjct: 283 SSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAII 342
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK--WVHVYAEYN 324
GGYA++GL L+ F RM G P++ T V VLSAC G ++ + + + +Y
Sbjct: 343 GGYASHGLATRALEEFDRMKVVGT--PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKY- 399
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
G Q + + ++D+Y + G + A ++ +M + D++ W +++ +H
Sbjct: 400 GIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLH 450
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ ++ SG+ ++ A+ M A +F+ I D+N+VSWNA+ GYA +
Sbjct: 290 QLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHG 349
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
+ F +MK + P+ TF VL +CV + EGE+ ++ K G +A +
Sbjct: 350 LATRALEEFDRMKVV-GTPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHY 408
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
+ +++LY + A + M E +VV+W +++ +CG + S L E A ER
Sbjct: 409 SCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALL---AACG-LHSNLELGEYAAER 462
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 315 KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH 374
K H + N N+ N ++ Y + I D+F+ M KD ++WN ++SG
Sbjct: 25 KQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRT 84
Query: 375 GRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
G F +M AG +P+ T +L A
Sbjct: 85 RNSEGLYRCFLQMGRAGVVPNDYTISTLLRA 115
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 288/537 (53%), Gaps = 18/537 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI V+ G E + +I + ++ RK+FD++ +N++SW M +GY QN
Sbjct: 159 QIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNS 218
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F + LF +M +L P+ F VL SC + AL +G ++H +K +N FV
Sbjct: 219 FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKN 278
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
LI++Y+ + A KVF M E+NV+ + +MI GY S + A EL E V L
Sbjct: 279 GLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEA---LELFHEMRVRL 335
Query: 200 WN----TIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEEC 247
+ T VS + V + A +L Q+ D+ + + ++ Y+ V++
Sbjct: 336 FPPSLLTFVS-LLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDA 394
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +FEEM E+++ WN + GY + E L + L R PN+ T +++A +
Sbjct: 395 RHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS-TLQFSRQKPNEFTFAALITAASN 453
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L +L + H G V NAL+DMYAKCG IE A +FNS +D++ WN++
Sbjct: 454 LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSM 513
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
IS A HG AL +F EM G P+ +TF+ +L AC+H G VE+GL++F SM +
Sbjct: 514 ISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFG 572
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I P EHY C+V LL R+G+L EA +F+++MPIE A++W +LL +CR+ NVEL + A
Sbjct: 573 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAA 632
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E +PK+ ++++LSNI+ G W DV +++ M + K PG S IEVN V
Sbjct: 633 EMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKV 689
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 239/483 (49%), Gaps = 15/483 (3%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
QL + Q+ VV SG ++ Y+ +I ++ + AR +FD++ ++ V+W
Sbjct: 49 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTT 108
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY + + LF QM++ + +P+ + VL +C + L G+++H VL+ G
Sbjct: 109 IIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 168
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF- 189
++ V LI+ Y+ ++A K+F +M +N++ WT+MI+GY+ A LF
Sbjct: 169 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 228
Query: 190 ---ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNG 242
L + D ++++ + + + R++ K ++ S N ++ YA +
Sbjct: 229 EMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSN 288
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND-ATIVTV 301
+ + K++F+ M E+NV S+N +I GY++ E L+ F M R+FP T V++
Sbjct: 289 LLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRV--RLFPPSLLTFVSL 346
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L A L AL+ SK +H G ++ G+ALID+Y+KC +++A VF M+ KD+
Sbjct: 347 LGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDI 406
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF-Q 420
+ WN + G H AL L+ ++ + + P+ TF ++ A +++ + G + Q
Sbjct: 407 VVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQ 466
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV 480
+ M P + + +VD+ A+ G + EA I D V W +++ + +
Sbjct: 467 LVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEA 523
Query: 481 ELA 483
E A
Sbjct: 524 EEA 526
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
LE + Q+ + + LE ++++ +I A+ + A+K+FD + +QNV+S+NAM
Sbjct: 252 LEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAM 311
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
GY+ E + LF +M+ P+ TF +L + AL +++H L++K G
Sbjct: 312 IEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGV 371
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-- 189
++F G+ALI++YS ++ A VF EM+E+++VVW +M GY + A L+
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYST 431
Query: 190 -ELAPER-DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGD 243
+ + ++ + + +++ ++ ++ ++ +Q+ K + N ++ YA G
Sbjct: 432 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 491
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+EE +++F R+V WN +I +A +G E L F+ M+ EG + PN T V VLS
Sbjct: 492 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG-IQPNYVTFVAVLS 550
Query: 304 ACARLGALD 312
AC+ G ++
Sbjct: 551 ACSHAGXVE 559
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
+ G E L F + + PN+ + +V+ AC +LG ++ +H + +G+ +V
Sbjct: 13 DEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 72
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
VG +LID Y+K G IE A VF+ + K +TW TII+G GR +L LF +M+
Sbjct: 73 YVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRET 132
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYF-----QSMAMDYSIVPQIEHYGCMVDLLARA 445
+PD +L AC+ + +E G + MD S+V ++D +
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV------NVLIDFYTKC 186
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLL 471
R+ +M ++ + + W ++
Sbjct: 187 NRVKAGRKLFDQMVVK-NIISWTTMI 211
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
+ L + +H Q Q+V GL+ ++T ++ A+ + ARKMF+ ++VV W
Sbjct: 451 ASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCW 510
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M + +AQ+ + +F +M K PN TF VL +C + +G +
Sbjct: 511 NSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG 570
Query: 129 NGFRANIFVGTALIELYS-TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
G + ++ L +GK EA + E +VW S+++ G++ +
Sbjct: 571 FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKY 630
Query: 188 LFELAPERD-------VILWNTIVSG--YIDVRNMIEARKLFDQMPKKDVI 229
E+A D ++L N S + DV +K+ D+M +V+
Sbjct: 631 AAEMAISTDPKDSGSYILLSNIFASKGMWADV------KKVRDRMDSSEVV 675
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 298/539 (55%), Gaps = 17/539 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ ++ G E ++ +I ++ + AR +FD++ ++ V WN M NGY +N
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR-----ANI 135
+F +M++ + PN TF VL C + G +LH LV+ +G AN
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-LAPE 194
F ALI++Y + +E A K+F + ++VV T+MI+GY+ G +A +F L E
Sbjct: 289 F---ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE 345
Query: 195 R---DVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEEC 247
R + + +++ + + ++L + K + ++ YA G ++
Sbjct: 346 RMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLA 405
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ F + +++ WN +I + NG E +D F++M G + + +I LSACA
Sbjct: 406 HQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKY-DCVSISAALSACAN 464
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
L AL + K +H + ++ ++ +ALIDMY+KCG ++ A VF++M+ K+ ++WN+I
Sbjct: 465 LPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSI 524
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ HGR +L+LFH M G PD +TF+ I+ AC H G V+EG+ YF+ M +
Sbjct: 525 IAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELG 584
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
I+ ++EHY CMVDL RAGRL EA + MP DA +W LLG+CR++ NVELAE+A
Sbjct: 585 IMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVAS 644
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
L +L+P+N +V+LSN++ + G+W+ V +I+ M++ G +K+PGCS I+VN +
Sbjct: 645 RNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHM 703
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 220/467 (47%), Gaps = 19/467 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q++ +G+ + + +++ A+ +F ++ WN M G+
Sbjct: 67 QAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMG 126
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ + +M +P+ +TFP V+K+C +N++ G +H + GF ++FVG+
Sbjct: 127 QFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGS 186
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
+LI+ YS I A +F M ++ V+W M+NGY+ GD +A +F E P
Sbjct: 187 SLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNP 246
Query: 194 ER-------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
V +++ + ++ + L P + + ++ Y DVE
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFA---LIDIYFKCRDVEM 303
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+++F++ ++ +I GY NG+ L+ F+ +L E R+ N T+ +VL ACA
Sbjct: 304 ARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQE-RMRANSVTLASVLPACA 362
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
L AL K +H + NG+ G+ VG+A++DMYAKCG ++ A F + KD + WN+
Sbjct: 363 GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNS 422
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+ + +G+ A+ LF +M AG D ++ L AC ++ + G + M
Sbjct: 423 MITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG-KEIHAFMMRG 481
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+ + ++D+ ++ G L A M E + V W +++ +
Sbjct: 482 AFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAA 527
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 166/419 (39%), Gaps = 93/419 (22%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+L++C + L +G + H +L NG N +GT L+ +Y A A +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 166 VVVWTSMINGY----------------------------------------ISCGDIVSA 185
W MI G+ ++ G +V
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
+ F + E DV + ++++ Y + + +AR LFD+MP KD + WN ML+GY NGD +
Sbjct: 172 KIQF-MGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+F EM +R T PN T VLS C
Sbjct: 231 NATGVFMEM----------------------------RRTETN----PNSVTFACVLSVC 258
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGN--ALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
A ++F +H +G + + V N ALID+Y KC +E A +F+ D++
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVV 318
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
+ISG ++G AL +F + + +T +L AC + + G
Sbjct: 319 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG------KE 372
Query: 424 MDYSIVPQIEHYGCMV-----DLLARAGRLAEAVDFVKRMPI---EADAVIWANLLGSC 474
+ I+ C V D+ A+ GRL D + I + DAV W +++ SC
Sbjct: 373 LHGHILKNGHGGSCYVGSAIMDMYAKCGRL----DLAHQTFIGISDKDAVCWNSMITSC 427
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ ++ +G S Y+ I+ A+ ++ A + F I+D++ V WN+M +QN
Sbjct: 372 ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNG 431
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF QM +C + L +C + AL G+E+H +++ FR+++F +
Sbjct: 432 KPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAES 491
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
ALI++YS ++ A +VF M+E+N V W S+I Y + G + + LF
Sbjct: 492 ALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFH 542
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 8/177 (4%)
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+V++L C L + H NG N +G L+ MY CG +A ++F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL- 416
WN +I G M G+ AL + +M G +PD TF ++ AC + V G
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 417 --SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
Q M + + ++ + G + +A RMP D V+W +L
Sbjct: 169 VHDKIQFMGFELDVFVG----SSLIKFYSENGCIHDARYLFDRMP-SKDGVLWNVML 220
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/530 (34%), Positives = 285/530 (53%), Gaps = 41/530 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+ +++ G + + + I A ++ AR +FDKI N W + Y++
Sbjct: 49 SLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIPRTNPRRWIVLIGAYSRCG 108
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
++ + +F ++++ P+ + P VLK+C ++ G +LH L+LKN ++ +V +
Sbjct: 109 YYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCS 168
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
ALI++Y+ G++ AR +FE +D++
Sbjct: 169 ALIDMYAKS-------------------------------GEVEKARRVFESMAGKDLVA 197
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
N +VSGY EA L ++M K ++++WNT+++G++ G+ E + LF+EM
Sbjct: 198 LNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEME 257
Query: 256 ----ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E +V SW +I G+ N E D F+RML G P ATI ++L ACA +G
Sbjct: 258 ANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAG-FHPTSATISSLLPACASVGNG 316
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H ++ G + +V V AL+DMYAKCG A +F M ++ TWN++I G
Sbjct: 317 RCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGY 376
Query: 372 AMHGRGAGALSLFHEMKNAGEMP-DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HG A+ LFH+MK+ E D +TF IL AC H GLV+ G S FQ M Y IVP
Sbjct: 377 ANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDLGRSLFQLMQSKYGIVP 436
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHY CMVD+ RAG+LAEA D +K MP++ D +W LLG+CR + +ELAE A + L
Sbjct: 437 RVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGACRKHGEIELAEEAAKHL 496
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+ELEP + N ++LS+IY + G W V ++K M+ KK PGCS IE
Sbjct: 497 SELEPGSVGNSLLLSDIYANAGSWGHVVKLKKMMKKRKMKKFPGCSWIET 546
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 161/379 (42%), Gaps = 44/379 (11%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
H + T + LH T ++ + LE Y+ +I A+ ++ AR++F+ + +++V
Sbjct: 140 GHLSEKTTGRKLH---TLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLV 196
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+ NAM +GYA + + L +M+ L PN T+ ++ +I EL +
Sbjct: 197 ALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEM 256
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI-SCGDIVSA 185
NG ++ T++I + E A+ F M ++ I+ + +C + +
Sbjct: 257 EANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNG 316
Query: 186 RCLFE-------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
RC E L E+DV + +V Y EA+ LF +M +++ +WN+M+ GY
Sbjct: 317 RCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGY 376
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
AN+G E LF +M + D K++ + T
Sbjct: 377 ANHGYCNEAIELFHQMKD-----------------------DDEKKL--------DHLTF 405
Query: 299 VTVLSACARLGALDFSKWV-HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+L+ACA G +D + + + G V ++D++ + G + A D+ +M
Sbjct: 406 TAILTACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMP 465
Query: 358 TK-DLITWNTIISGLAMHG 375
K DL W ++ HG
Sbjct: 466 VKPDLYVWGALLGACRKHG 484
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+ ++ C R L+F + +H +G I YA CG I++A +F+ +
Sbjct: 32 IELIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIPR 91
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ W +I + G ALS+F E++ G P +L AC H+ G
Sbjct: 92 TNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRK- 150
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
++ + S+ ++D+ A++G + +A + M + + A + G Y
Sbjct: 151 LHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSG----YA 206
Query: 479 NVELAELALERLTELE 494
+ LAE AL + E++
Sbjct: 207 HHGLAEEALNLVEEMQ 222
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 283/542 (52%), Gaps = 71/542 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ--MTYARKMFDKITDQNVVS 67
E+ + HL Q QV T+GL+ + + R++ C+ Q +TYA ++F++I +
Sbjct: 13 EKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHHPTLCI 72
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N + + N +FT+M P+ +T P VLK+C ALR+ C
Sbjct: 73 CNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACA---ALRD-----C--- 121
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
S GK M++GY S
Sbjct: 122 ------------------SLGK----------------------MVHGYSS--------- 132
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
+L D+ + N++++ Y ++I AR +FD+MP+ +SW+ M+SGYA GDV+
Sbjct: 133 --KLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSA 190
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ F+E PE++ W +I GY N F E L F R+L V P+++ V++LSACA
Sbjct: 191 RLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLF-RLLQLTHVVPDESIFVSILSACAH 249
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
LGALD W+H Y ++ + +L+DMYAKCG +E A +F+SM +D++ WN +
Sbjct: 250 LGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAM 309
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
ISGLAMHG GA AL +F EM+ G PD ITFI + AC++ G+ EGL M+ Y
Sbjct: 310 ISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYE 369
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA-----DAVIWANLLGSCRVYKNVEL 482
I P+ EHYGC+VDLL+RAG EA+ ++R+ + + + W L +C + +L
Sbjct: 370 IEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQL 429
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
AE A +RL LE + +V+LSN+Y G+ D R++ MR+ G K PGCSS+E++
Sbjct: 430 AERAAKRLLRLE-NHSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSVEIDG 488
Query: 543 VV 544
VV
Sbjct: 489 VV 490
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 298/550 (54%), Gaps = 14/550 (2%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
T +H E L+ + +H V+ + Y+ ++T A+ + A+K+FD++ D+
Sbjct: 252 TACSHGEVLDFGRQVH---CDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK 308
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
V NAM + + N + L+ +MK + + FT +L C + + G +H
Sbjct: 309 EVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVH 368
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
V+K ++N+ + +AL+ +Y + E A VF M ER+VV W SMI G+
Sbjct: 369 AEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFK 428
Query: 184 SARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKK-----DVISWNTM 234
A LF + D + +++S + + N +E L K DV ++
Sbjct: 429 DALDLFRAMEKEGVKADSDVMTSVISAGLGLEN-VELGHLIHGFAIKRGLESDVFVACSL 487
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ Y+ G E + +F MP +N+ +WN +I Y+ NGL ++ ++L G + +
Sbjct: 488 VDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG-FYLD 546
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+I TVL A + + AL K +H Y ++ V NALIDMY KCG ++ A +F
Sbjct: 547 SVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFE 606
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+M ++L+TWN++I+G HG A+ LF EMK + PD +TF+ ++ +C+H G+VEE
Sbjct: 607 NMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEE 666
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
GL+ FQ M ++Y + P++EHY +VDLL RAGRL +A F++ MPI+AD +W LL +C
Sbjct: 667 GLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFAC 726
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
R ++N+EL EL + L ++EP +N+V L N+YG++ W A ++ +M+ G KK PG
Sbjct: 727 RAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPG 786
Query: 535 CSSIEVNEVV 544
CS IEV V
Sbjct: 787 CSWIEVKNRV 796
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 229/498 (45%), Gaps = 41/498 (8%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-----NV 65
L H I +VT GL+ YI +I + + A ++FDK+++ ++
Sbjct: 67 SLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDI 126
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN + +GY + + F +M++L + G ++H
Sbjct: 127 TVWNPVIDGYFKYGHFEEGLAQFCRMQEL-------------------SWYMAGRQIHGY 167
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDIVS 184
+++N F + ++ TALI +YS+ A+ +FG+++ R N+V W MI G++ G
Sbjct: 168 IIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEK 227
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN---------TML 235
+ L+ LA + L + +G + E F + DVI N ++L
Sbjct: 228 SLELYSLAKNENCKLVSASFTGAFTACSHGEVLD-FGRQVHCDVIKMNFQDDPYVCTSLL 286
Query: 236 SGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
+ YA +G VE+ K++F+++ ++ V N +I + NG ++ L + +M G +
Sbjct: 287 TMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGETPVDS 345
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
TI ++LS C+ +G+ DF + VH Q NV + +AL+ MY KCG E+A VF +
Sbjct: 346 FTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYT 405
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
M +D++ W ++I+G + R AL LF M+ G D ++ A + VE G
Sbjct: 406 MKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELG 465
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
A+ + + +VD+ ++ G AE+ + V + V W +++ SC
Sbjct: 466 -HLIHGFAIKRGLESDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAWNSMI-SCY 522
Query: 476 VYKNVELAELALERLTEL 493
+ L E+++ L ++
Sbjct: 523 SWNG--LPEMSINLLPQI 538
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 237/494 (47%), Gaps = 24/494 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQN 78
QI ++ + E Y+ +I + + A +F K+ ++ N+V+WN M G+ +N
Sbjct: 163 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 222
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ L++ K + +F +C L G ++HC V+K F+ + +V
Sbjct: 223 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 282
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE--LAPERD 196
T+L+ +Y+ ++E A KVF ++ ++ V + +MI+ +I G A L+ A E
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 342
Query: 197 V-------ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
V +L V G D + A + M + +V + +L+ Y G E+
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSM-QSNVAIQSALLTMYYKCGSTEDADS 401
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F M ER+V +W +I G+ N F + LD F+ M EG V + + +V+SA L
Sbjct: 402 VFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEG-VKADSDVMTSVISAGLGLE 460
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
++ +H +A G + +V V +L+DMY+K G E+A VF+SM K+L+ WN++IS
Sbjct: 461 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ +G +++L ++ G D ++ +L A + + + +G + + + I
Sbjct: 521 CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT-LHAYQIRLQIP 579
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL------GSC----RVYKN 479
++ ++D+ + G L A + MP + V W +++ G+C R++K
Sbjct: 580 SDLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKE 638
Query: 480 VELAELALERLTEL 493
++ +E A + +T L
Sbjct: 639 MKRSETAPDEVTFL 652
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 196/422 (46%), Gaps = 29/422 (6%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
FTFP +LK+C ++ L G +H ++ G +++ ++ T+LI +Y + +A +VF +
Sbjct: 56 FTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDK 115
Query: 161 MDER-----NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIE 215
M E ++ VW +I+GY G F E + + GYI +RNM E
Sbjct: 116 MSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYI-IRNMFE 174
Query: 216 ARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGGYANNGL 274
+ ++ Y++ E LF ++ R N+ +WN +IGG+ NG+
Sbjct: 175 GDPYLE----------TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGM 224
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGN 334
+ + L+ + E + A+ +AC+ LDF + VH +Q + V
Sbjct: 225 WEKSLELYSLAKNENCKLVS-ASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCT 283
Query: 335 ALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMP 394
+L+ MYAK G +E+A VF+ + K++ N +IS +GR AL L+++MK AGE P
Sbjct: 284 SLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK-AGETP 342
Query: 395 -DGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVD 453
D T +L C+ +G + G + + + S+ + ++ + + G +A D
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRT-VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA-D 400
Query: 454 FVKRMPIEADAVIWANLL-GSC--RVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
V E D V W +++ G C R +K+ L L R E E + VM S I
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDA----LDLFRAMEKEGVKADSDVMTSVISAG 456
Query: 511 LG 512
LG
Sbjct: 457 LG 458
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 295/536 (55%), Gaps = 21/536 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + V GLE+ + +++ A+ + + A ++F+ + ++V+WN M +G QN
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF M + A P+ T +L + +N L++G+E+H +++N + F+ +
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+++Y + + A ++ +VV+ +++I+GY+ G A +F +L
Sbjct: 383 ALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFR------YLL 436
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE--------ECKRL- 250
I + V +++ A +P I + + Y VE +C RL
Sbjct: 437 EQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLD 496
Query: 251 -----FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
F +M ++ +WN +I ++ NG E LD F++M EG + N+ TI + LSAC
Sbjct: 497 LSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY-NNVTISSALSAC 555
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A L A+ + K +H + ++ +ALIDMYAKCG +E A+ VF M K+ ++WN
Sbjct: 556 ASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWN 615
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+IIS HG ++S H M+ G PD +TF+ ++ AC H GLVEEGL FQ M +
Sbjct: 616 SIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKE 675
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I P++EH+ CMVDL +R+GRL +A+ F+ MP + DA IW LL +CRV++NVELA++
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
A + L +L+P N +V++SNI GRW V++++ M+D K+PG S ++VN
Sbjct: 736 ASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN 791
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 223/489 (45%), Gaps = 12/489 (2%)
Query: 27 TSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVV 86
+GL Y+ +I + + AR FD + ++ V WN M +GY + V
Sbjct: 169 ATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVR 228
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
LF M+ PN T L C L G +LH L +K G + V L+ +Y+
Sbjct: 229 LFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYA 288
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNT 202
+ ++ A+++F + ++V W MI+G + G + A LF D + +
Sbjct: 289 KCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVS 348
Query: 203 IVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
++ D+ + + +++ + + D + ++ Y DV + L++ +
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAID 408
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVH 318
V + +I GY NG+ + L F R L E + PN T+ +VL ACA + AL + +H
Sbjct: 409 VVIGSTVISGYVLNGMSEKALQMF-RYLLEQCIKPNAVTVASVLPACASISALPLGQEIH 467
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
Y N Y+G V +AL+DMYAKCG ++ + +F+ M KD +TWN++IS + +G
Sbjct: 468 GYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQ 527
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
AL LF +M G + +T L AC + + G + + I I +
Sbjct: 528 EALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYG-KEIHGVIIKGPIKADIFAESAL 586
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
+D+ A+ G + A+ + MP + + V W +++ + + V+ + L R+ E E P
Sbjct: 587 IDMYAKCGNMELALRVFEFMP-DKNEVSWNSIISAYGAHGLVKESVSFLHRMQE-EGYKP 644
Query: 499 ANFVMLSNI 507
+ L+ I
Sbjct: 645 DHVTFLALI 653
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 196/449 (43%), Gaps = 75/449 (16%)
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKINALREGEELH 123
+ WN + G+ H V+ + +M A P + T P V+KSC + A+ G +H
Sbjct: 105 LPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVH 164
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
G ++++VG+ALI++YS + A F M R+ V+W M++GYI GD+
Sbjct: 165 RTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVG 224
Query: 184 SARCLF---------------------------------------ELAPERDVILWNTIV 204
A LF + E++V + NT++
Sbjct: 225 GAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLL 284
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
S Y R + +A +LF+ +P+ D+++WN M+SG NG ++E
Sbjct: 285 SMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEAL---------------- 328
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
GLF ++L + R P+ T+V++L A L L K VH Y N
Sbjct: 329 --------GLFCDMLRSGAR--------PDSVTLVSLLPALTDLNGLKQGKEVHGYIIRN 372
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ + +AL+D+Y KC + A +++++ D++ +T+ISG ++G AL +F
Sbjct: 373 CVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMF 432
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+ P+ +T +L AC + + G + + + ++D+ A+
Sbjct: 433 RYLLEQCIKPNAVTVASVLPACASISALPLG-QEIHGYVLRNAYEGKCYVESALMDMYAK 491
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGS 473
GRL + +M ++ D V W +++ S
Sbjct: 492 CGRLDLSHYIFSKMSLK-DEVTWNSMISS 519
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 171/377 (45%), Gaps = 19/377 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L K ++ ++ + + ++ ++ + + + AR ++D +VV + +
Sbjct: 356 LNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTV 415
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GY N + +F + + PN T VL +C I+AL G+E+H VL+N +
Sbjct: 416 ISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAY 475
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+V +AL+++Y+ ++ ++ +F +M ++ V W SMI+ + G+ A LF
Sbjct: 476 EGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQ 535
Query: 192 APERDVILWNTIVSGYIDVRNMIEA-------RKLFDQMP-KKDVISWNTMLSGYANNGD 243
+ N +S + + A + + P K D+ + + ++ YA G+
Sbjct: 536 MCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGN 595
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+E R+FE MP++N SWN +I Y +GL E + RM EG P+ T + ++S
Sbjct: 596 MELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYK-PDHVTFLALIS 654
Query: 304 ACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
ACA G ++ F Y + C ++D+Y++ G ++ A+ M
Sbjct: 655 ACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFAC----MVDLYSRSGRLDKAIQFIADMPF 710
Query: 359 K-DLITWNTIISGLAMH 374
K D W ++ +H
Sbjct: 711 KPDAGIWGALLHACRVH 727
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 19/327 (5%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRAN---IFVGTALIELYSTGKAIEAAYKVFGEMD 162
+L+ CV L G ++H + +G +N + + T L+ +Y + A VF +
Sbjct: 38 LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 163 ER---NVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVS-----GYI 208
+ + W +I G+ + G A + AP D +V G +
Sbjct: 98 RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157
Query: 209 DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ ++ R DV + ++ Y++ G + + + F+ MP R+ WN ++ G
Sbjct: 158 SLGRLVH-RTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDG 216
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
Y G + F+ M G PN AT+ LS CA L +H A G +
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSG-CEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQ 275
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
V V N L+ MYAKC +++A +F + DL+TWN +ISG +G AL LF +M
Sbjct: 276 EVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDML 335
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEG 415
+G PD +T + +L A T + +++G
Sbjct: 336 RSGARPDSVTLVSLLPALTDLNGLKQG 362
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 282/563 (50%), Gaps = 71/563 (12%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I ++ G + + ++ A++ + A +F+KI ++VSWNA+ G +E
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
H + L QMK+ PN FT LK+C + G +LH ++K +++FV
Sbjct: 340 HEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG 399
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILW 200
L+++YS C + AR F L PE+D+I W
Sbjct: 400 LVDMYS-------------------------------KCDLLEDARMAFNLLPEKDLIAW 428
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKK---------------------------------- 226
N I+SGY +EA LF +M K+
Sbjct: 429 NAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVK 488
Query: 227 -----DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
D+ N+++ Y VE+ +R+FEE ++ S+ +I YA G E L
Sbjct: 489 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKL 548
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
F M + + P+ ++L+ACA L A + K +HV+ G+ ++ GN+L++MYA
Sbjct: 549 FLEM-QDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYA 607
Query: 342 KCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIG 401
KCG I++A F+ + + +++W+ +I GLA HG G AL LF++M G P+ IT +
Sbjct: 608 KCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVS 667
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
+L AC H GLV E YF+SM + P EHY CM+DLL RAG++ EAV+ V +MP E
Sbjct: 668 VLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFE 727
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
A+A +W LLG+ R++K+VEL A E L LEP+ V+L+NIY G+W++VA ++
Sbjct: 728 ANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVR 787
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
MRD+ KK PG S IEV + V
Sbjct: 788 RLMRDSKVKKEPGMSWIEVKDKV 810
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 256/539 (47%), Gaps = 31/539 (5%)
Query: 11 QLETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
Q TTK L QI + SGL I +I ++ + YARK+ D+ ++ ++VS
Sbjct: 65 QCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVS 124
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
W+A+ +GYAQN ++ F +M L N FTF VLK+C + LR G+++H +V+
Sbjct: 125 WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVV 184
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS---CGDIVS 184
+GF ++FV L+ +Y+ + ++F E+ ERNVV W ++ + Y+ CG+ V
Sbjct: 185 VSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVG 244
Query: 185 ---ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSG 237
L + P + +++V+ +R+ + + + K D S N ++
Sbjct: 245 LFYEMVLSGIKPNEFSL--SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDM 302
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
YA GD+ + +FE++ + ++ SWN +I G + + L+ +M G + PN T
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG-ICPNIFT 361
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+ + L ACA +G + + +H + ++ V L+DMY+KC ++E+A FN +
Sbjct: 362 LSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 421
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE---- 413
KDLI WN IISG + + ALSLF EM G + T IL + + +V
Sbjct: 422 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 481
Query: 414 -EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
GLS D +V ++D + + +A + I D V + +++
Sbjct: 482 VHGLSVKSGFHSDIYVV------NSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMIT 534
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLS--NIYGDLGRWKDVARIKVAMRDTGF 529
+ Y E A + ++E K P FV S N +L ++ ++ V + GF
Sbjct: 535 AYAQYGQGEEALKLFLEMQDMELK-PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGF 592
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 188/438 (42%), Gaps = 80/438 (18%)
Query: 98 PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
P ++ +L C +LR G ++H + K+G + + LI LYS + A K+
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 158 FGEMDERNVVVWTSMINGYISCG------------DIVSARC-LFELAP----------- 193
E E ++V W+++I+GY G ++ +C F +
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 194 ---------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
E DV + NT+V Y +++++LFD++P+++V+SWN + S Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
E LF EM VL K PN+ ++
Sbjct: 234 VQIDFCGEAVGLFYEM-----------------------VLSGIK---------PNEFSL 261
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
++++AC L K +H Y GY + NAL+DMYAK G + +A+ VF +
Sbjct: 262 SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ 321
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D+++WN +I+G +H AL L +MK +G P+ T L AC MGL E G
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQL 381
Query: 419 FQS---MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW-ANLLGSC 474
S M M+ + + +VD+ ++ L +A +P E D + W A + G
Sbjct: 382 HSSLMKMDMESDLFVSVG----LVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISGYS 436
Query: 475 RVYKNVELAELALERLTE 492
+ ++++E L +E E
Sbjct: 437 QYWEDMEALSLFVEMHKE 454
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 19/280 (6%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI 60
+K T G L+ Q+ V SG Y+ +I + + + A ++F++
Sbjct: 467 LKSTAG-----LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 521
Query: 61 TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
T ++VS+ +M YAQ + LF +M+ ++ P+ F +L +C ++A +G+
Sbjct: 522 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 581
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+LH +LK GF +IF G +L+ +Y+ +I+ A + F E+ ER +V W++MI G G
Sbjct: 582 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHG 641
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRN----MIEARKLFDQMPKKDVISWNTMLS 236
A LF + V + + + N + EA+ F+ M +++ + M
Sbjct: 642 HGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESM--EELFGFKPMQE 699
Query: 237 GYA-------NNGDVEECKRLFEEMP-ERNVFSWNGLIGG 268
YA G + E L +MP E N W L+G
Sbjct: 700 HYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 739
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
A ++ +G P + +LS C +L +H + +G + + N LI++Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
+KC A + + DL++W+ +ISG A +G G GAL FHEM G + TF
Sbjct: 102 SKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 401 GILCACT 407
+L AC+
Sbjct: 162 SVLKACS 168
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 296/545 (54%), Gaps = 13/545 (2%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN 64
T A +++L K LH + ++ G + +++ + ++ ++ Y K+FDK++ +N
Sbjct: 84 TYARTKELNKGKQLHAM---LIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN 140
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
+VSW ++ G+A N + + F QM+ + F VL++C + A++ G ++HC
Sbjct: 141 MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHC 200
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
LV+K GF +FVG+ L ++YS + A K F EM ++ V+WTSMI+G++ GD
Sbjct: 201 LVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKK 260
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLS 236
A + DV + ++ + + ++A + + + N +
Sbjct: 261 ALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTD 320
Query: 237 GYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPND 295
Y+ +GD+ +F+ + ++ S +I GY + L F + G + PN+
Sbjct: 321 MYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRG-IEPNE 379
Query: 296 ATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS 355
T +++ ACA L+ +H ++ + V + L+DMY KCG+ ++++ +F+
Sbjct: 380 FTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDE 439
Query: 356 MDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
++ D I WNT++ + HG G A+ F+ M + G P+ +TF+ +L C+H G+VE+G
Sbjct: 440 IENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG 499
Query: 416 LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCR 475
L+YF SM Y +VP+ EHY C++DLL RAG+L EA DF+ MP E + W + LG+C+
Sbjct: 500 LNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACK 559
Query: 476 VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
++ ++E A+ A ++L +LEP+N V+LSNIY +W+DV ++ ++D KLPG
Sbjct: 560 IHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGY 619
Query: 536 SSIEV 540
S +++
Sbjct: 620 SWVDI 624
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 196/470 (41%), Gaps = 89/470 (18%)
Query: 85 VVLFTQMKKL----DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
++ F+ +K L + + T ++++ + L +G++LH ++++ G N F+
Sbjct: 56 IISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNH 115
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---DIVSARCLFELAPER-- 195
+ LYS ++ K+F +M +RN+V WTS+I G+ + +S+ C + E
Sbjct: 116 FLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIAT 175
Query: 196 ----------------------------------DVILWNTIVSGYIDVRNMIEARKLFD 221
++ + + + Y + +A K F+
Sbjct: 176 QFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFE 235
Query: 222 QMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDA 281
+MP KD + W +M+ G+ NGD F + L A
Sbjct: 236 EMPCKDAVLWTSMIDGFVKNGD-------------------------------FKKALTA 264
Query: 282 FKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYA 341
+ +M+T+ VF + + + LSAC+ L A F K +H G++ +GNAL DMY+
Sbjct: 265 YMKMVTDD-VFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYS 323
Query: 342 KCGIIENAVDVFN-SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
K G + +A +VF D +++ II G + ALS F +++ G P+ TF
Sbjct: 324 KSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFT 383
Query: 401 GILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
++ AC + +E G + Q + ++ P + +VD+ + G ++ +
Sbjct: 384 SLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHSIQLFDEIE 441
Query: 460 IEADAVIWANLLGSCRVYKNVELAELALERLT-----ELEPKNPANFVML 504
D + W L+G V+ L A+E L+P N FV L
Sbjct: 442 -NPDEIAWNTLVG---VFSQHGLGRNAIETFNGMIHRGLKP-NAVTFVNL 486
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 295/533 (55%), Gaps = 11/533 (2%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ Q+ G++ + A+ ++ AR++FD++ ++ V+WNA+ GYA+N
Sbjct: 81 VHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGL 140
Query: 81 HRTVVVLFTQMKKLDA-MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R + + +M++ + P+ T VL +C AL E H +++G + V T
Sbjct: 141 ARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVAT 200
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
A+++ Y I AA VF M +N V W +MI+GY GD A LF E V +
Sbjct: 201 AILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDV 260
Query: 200 WNTIVSGYI----DVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLF 251
+ V + ++ + E ++ + + + +V N +++ Y+ V+ +F
Sbjct: 261 TDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVF 320
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+E+ R SWN +I G A NG + + F RM E V P+ T+V+V+ A A +
Sbjct: 321 DELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDP 379
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
++W+H Y+ +V V ALIDMYAKCG + A +FNS + +ITWN +I G
Sbjct: 380 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGY 439
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG G A+ LF EMK+ G +P+ TF+ +L AC+H GLV+EG YF SM DY + P
Sbjct: 440 GSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPG 499
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYG MVDLL RAG+L EA F+++MP++ ++ +LG+C+++KNVELAE + +++
Sbjct: 500 MEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIF 559
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
EL P+ V+L+NIY + WKDVAR++ AM G +K PG S I++ NE+
Sbjct: 560 ELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEI 612
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 140/358 (39%), Gaps = 72/358 (20%)
Query: 88 FTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST 147
F M A P TF +LK C L G +H + G + TAL +Y+
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 148 GKAIEAAYKVFGEMDERNVVVWTSMINGYISC-----------------GDIVSARCLFE 190
+ A +VF M R+ V W +++ GY G+ + L
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 191 LAP-----------------------ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD 227
+ P E V + I+ Y ++ AR +FD MP K+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 228 VISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLT 287
+SWN M+ GYA NGD E L F RM+
Sbjct: 227 SVSWNAMIDGYAQNGDSR-------------------------------EALALFNRMVE 255
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIE 347
EG V D +++ L AC LG LD VH G NV V NALI MY+KC ++
Sbjct: 256 EG-VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVD 314
Query: 348 NAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
A VF+ +D + ++WN +I G A +G A+ LF M+ PD T + ++ A
Sbjct: 315 LASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA 372
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 15/248 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +V GL+ + + +IT ++ K++ A +FD++ + VSWNAM G AQN
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V LFT+M+ + P+ FT V+ + I+ + +H ++ +++V T
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAP 193
ALI++Y+ + A +F ER+V+ W +MI+GY S G +A LFE + P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKD------VISWNTMLSGYANNGDVEEC 247
L +++S + E R+ F M K+D + + TM+ G ++E
Sbjct: 463 NETTFL--SVLSACSHAGLVDEGREYFTSM-KEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519
Query: 248 KRLFEEMP 255
++MP
Sbjct: 520 WAFIQKMP 527
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L AF M + G P T ++L CA G L + VH G AL +
Sbjct: 44 LAAFVAMSSAG-APPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK-NAGEMPDGI 397
MYAKC +A VF+ M +D + WN +++G A +G A+ + M+ GE PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 398 TFIGIL 403
T + +L
Sbjct: 163 TLVSVL 168
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 256/451 (56%), Gaps = 10/451 (2%)
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ T PI LKS ++ + LR GE+LH LK N V T+L+ LY+ + A +
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRN 212
VF EM + V WT++I Y+ GD+ A R F D +++ + +
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 213 MIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ ++ + + V + Y G++ + + +F++M ++ +W ++GG
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
YA+NG E LD F M EG + P+ + LSAC RLGALD + +++ +
Sbjct: 703 YASNGHPREALDLFLAMQAEG-MKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 761
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
N +G ALIDMYAKCG A VF M KD+I WN +I GL M G A +L +M+
Sbjct: 762 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 821
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+G + TFIG+LC+CTH GL+++G YF +M Y I P+IEHYGCMVDLL+RAG L
Sbjct: 822 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 881
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA V MP+ A+AVI LLG C++++N ELAE L++L LEP N N+VMLSNIY
Sbjct: 882 QEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 941
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRW+D A++++ M+ G +K+P CS +E
Sbjct: 942 SNRGRWEDAAKLRLDMKAKGVEKVPACSWVE 972
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 156/374 (41%), Gaps = 19/374 (5%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITAC----AQLKQMTYARKMFDKITDQNVVSWNAMF 72
H + Q+ L+ + P ++T+ A+ + A+++FD++ + V W A+
Sbjct: 540 HPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 599
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y R V + P+ FT VL +C +I L GE + + G
Sbjct: 600 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 659
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
++FV TA ++LY + A +VF +M ++ V W +M+ GY S G A LF
Sbjct: 660 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 719
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----------YANNG 242
+ V+G + + A L Q + ++ W+ L YA G
Sbjct: 720 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIR--MVDWDEFLDNPVLGTALIDMYAKCG 777
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
E +F++M ++++ WN +I G G ++ A + + V ND T + +L
Sbjct: 778 STVEAWVVFQQMRKKDIIVWNAMILGLGMTG-HEKIAFALVGQMEKSGVKLNDNTFIGLL 836
Query: 303 SACARLGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKD 360
+C G + D ++ H + + ++D+ ++ G+++ A + + M +
Sbjct: 837 CSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPAN 896
Query: 361 LITWNTIISGLAMH 374
+ ++ G +H
Sbjct: 897 AVILGALLGGCKIH 910
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/365 (45%), Positives = 225/365 (61%), Gaps = 19/365 (5%)
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP 255
D L + +VS Y R + EAR++FD+MP++D +N +LS YA G V+ ++LF EM
Sbjct: 123 DPFLGSALVSFYAKSRLLDEARRVFDEMPRRDTAVYNALLSAYARCGLVDAAEKLFGEMT 182
Query: 256 ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSK 315
ERNV SW ++ GYA NG ++ F M V PN+ T+ +VL ACA +GA++
Sbjct: 183 ERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQPNELTVSSVLPACAAVGAMELGT 242
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMH 374
V YA G+ GNV V NAL++MYAKCG I+ A VF + +DL +WNT+I A+H
Sbjct: 243 KVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHRRDLCSWNTMIMAFAVH 302
Query: 375 GRGAGALSLFHEMK------------------NAGEMPDGITFIGILCACTHMGLVEEGL 416
G AL+LFH+++ G PDGITF+G++ ACTH GLV+EG
Sbjct: 303 GLWMEALALFHKLRVRISCSNSLVYFFSIPTHMTGVKPDGITFVGVILACTHGGLVDEGK 362
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
F SM D+SI P+IEHYGCMVDLL RAG L EA + MP E DAVIW LLG+C
Sbjct: 363 LIFNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSMIISMPAEPDAVIWGALLGACSF 422
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ N+ELAE A+++L LEP+N AN V+LSNIY G+W VA++ +++ KK G S
Sbjct: 423 HGNIELAETAVDKLMYLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYS 482
Query: 537 SIEVN 541
IE++
Sbjct: 483 FIELD 487
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 72/320 (22%)
Query: 123 HCLVLKNGFRA--NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
H L++K+G A + F+G+AL+ Y+ + ++ A +VF EM R+ V+ ++++ Y CG
Sbjct: 110 HALLVKSGHFASGDPFLGSALVSFYAKSRLLDEARRVFDEMPRRDTAVYNALLSAYARCG 169
Query: 181 DIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM-------PKKDVIS--- 230
+ +A LF ER+V+ W +VSGY A + F +M P + +S
Sbjct: 170 LVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQPNELTVSSVL 229
Query: 231 ------------------------------WNTMLSGYANNGDVEECKRLFEEMPE-RNV 259
N +L YA G ++ ++F+ + R++
Sbjct: 230 PACAAVGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHRRDL 289
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTE-----------------GRVFPNDATIVTVL 302
SWN +I +A +GL+ E L F ++ V P+ T V V+
Sbjct: 290 CSWNTMIMAFAVHGLWMEALALFHKLRVRISCSNSLVYFFSIPTHMTGVKPDGITFVGVI 349
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVG------NALIDMYAKCGIIENAVDVFNSM 356
AC G +D K + +N + + + ++D+ + G+++ A + SM
Sbjct: 350 LACTHGGLVDEGKLI-----FNSMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSMIISM 404
Query: 357 DTK-DLITWNTIISGLAMHG 375
+ D + W ++ + HG
Sbjct: 405 PAEPDAVIWGALLGACSFHG 424
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 31/333 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMP 98
+++A A+ + A K+F ++T++NVVSW AM +GYAQN H V F +M + P
Sbjct: 161 LLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQP 220
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
N T VL +C + A+ G ++ G N+FV AL+E+Y+ +I+ A++VF
Sbjct: 221 NELTVSSVLPACAAVGAMELGTKVEEYARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVF 280
Query: 159 -GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEAR 217
G R++ W +MI + G + A LF R + N++V + +M
Sbjct: 281 QGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVR-ISCSNSLVYFFSIPTHMTGV- 338
Query: 218 KLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY-------A 270
K D I++ ++ + G V+E K +F M FS N I Y
Sbjct: 339 -------KPDGITFVGVILACTHGGLVDEGKLIFNSMEAD--FSINPRIEHYGCMVDLLG 389
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWV---HVYAEYNGYQ 327
GL E M E P+ +L AC+ G ++ ++ +Y E
Sbjct: 390 RAGLLKEAYSMIISMPAE----PDAVIWGALLGACSFHGNIELAETAVDKLMYLEPQNTA 445
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
V + N +YA G + V+ + KD
Sbjct: 446 NLVILSN----IYASSGKWDGVAQVWKLLKEKD 474
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALIDMYAK---------------- 342
+LS+ A F+ H +G+ G+ +G+AL+ YAK
Sbjct: 93 LLSSPAAASHAPFALCSHALLVKSGHFASGDPFLGSALVSFYAKSRLLDEARRVFDEMPR 152
Query: 343 ---------------CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
CG+++ A +F M +++++W ++SG A +GR A+ F EM
Sbjct: 153 RDTAVYNALLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEAAVETFLEM 212
Query: 388 -KNAGEMPDGITFIGILCACTHMGLVEEG 415
+ AG P+ +T +L AC +G +E G
Sbjct: 213 WEGAGVQPNELTVSSVLPACAAVGAMELG 241
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 281/511 (54%), Gaps = 19/511 (3%)
Query: 45 AQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF 103
++ QM +A +F T + NV ++NA+ +G+ N F + +M+ MP+ FTF
Sbjct: 3 SKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTF 62
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
P +K+C+ + E +++H L+ K G ++F+G+AL+ Y +E A F E+
Sbjct: 63 PCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI 119
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDV----RNMIEARKL 219
R+VV+W +M+NGY G F + V+ V+G + V ++ R +
Sbjct: 120 RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRII 179
Query: 220 FDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLF 275
K V N+++ Y +E+ +FE M E+++FSWN + + G
Sbjct: 180 HGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDH 239
Query: 276 FEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ------GN 329
L RML G + P+ T+ TVL AC+ L AL + +H Y +G +
Sbjct: 240 DGTLRLLDRMLGAG-IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 298
Query: 330 VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
V + NA+IDMYAKCG + +A VF M KD+ +WN +I G MHG G AL +F M
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 358
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLA 449
PD +TF+G+L AC+H G V +G ++ M Y + P IEHY C++D+L RAG+L
Sbjct: 359 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 418
Query: 450 EAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
EA + MPIEA+ V+W LL +CR++K+ LAE+A +R+ ELEP++ ++V++SN+YG
Sbjct: 419 EAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYG 478
Query: 510 DLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
+GR+++V ++ MR +K PGCS IE+
Sbjct: 479 AVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 509
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 178/377 (47%), Gaps = 25/377 (6%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
+ +I + GLE +I ++ + M +A+ F+++ ++VV WNAM NGYAQ
Sbjct: 75 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 134
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
V+ F +M +P+ FT +L + L G +H +K G+ + + V
Sbjct: 135 IGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 194
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAP 193
+LI++Y K IE A ++F M E+++ W S+ + + CGD L +
Sbjct: 195 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGI 254
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLF----------DQMPKKDVISWNTMLSGYANNGD 243
+ D++ T++ + ++ R++ D DV+ N ++ YA G
Sbjct: 255 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGS 314
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
+ + +FE M ++V SWN +I GY +G E L+ F RM E ++ P++ T V VLS
Sbjct: 315 MRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRM-CEVQLKPDEVTFVGVLS 373
Query: 304 ACARLGALDFSK--WVHVYAEYN---GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
AC+ G + + + ++Y+ + CV IDM + G ++ A ++ +M
Sbjct: 374 ACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCV----IDMLGRAGQLDEAYELALTMPI 429
Query: 359 K-DLITWNTIISGLAMH 374
+ + + W +++ +H
Sbjct: 430 EANPVVWRALLAACRLH 446
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 280/530 (52%), Gaps = 47/530 (8%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
F + V++W ++ + + F +M+ P+ FP VLKSC + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYST----GKAIEAAYKVFGEMDERNVVVWTSM 172
R GE +H +++ G +++ G AL+ +Y+ G I VF EM +R
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG-NVFDEMPQRTSNSGDED 180
Query: 173 INGY--ISCGDIVSARCLFELAPERDVILWNTIVSGYID----------VRNM------- 213
+ I I S R +FE+ P +DV+ +NTI++GY VR M
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 214 ------------------IEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
I+ +++ + +K DV ++++ YA + +E+ +R+F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ R+ SWN L+ GY NG + E L F++M+T +V P +V+ ACA L L
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATL 359
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H Y G+ N+ + +AL+DMY+KCG I+ A +F+ M+ D ++W II G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A+HG G A+SLF EMK G P+ + F+ +L AC+H+GLV+E YF SM Y + +
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY + DLL RAG+L EA +F+ +M +E +W+ LL SC V+KN+ELAE E++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
++ +N +V++ N+Y GRWK++A++++ MR G +K P CS IE+
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 169/335 (50%), Gaps = 19/335 (5%)
Query: 54 RKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKI 113
R++F+ + ++VVS+N + GYAQ+ + + + +M D P+ FT VL +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
+ +G+E+H V++ G +++++G++L+++Y+ IE + +VF + R+ + W S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 174 NGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPK---- 225
GY+ G A LF V + +++++ + + ++L + +
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
++ + ++ Y+ G+++ +++F+ M + SW +I G+A +G E + F+ M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 286 LTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMY 340
+G V PN V VL+AC+ +G +D F+ VY G + A+ D+
Sbjct: 436 KRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY----GLNQELEHYAAVADLL 490
Query: 341 AKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAMH 374
+ G +E A + + M + + W+T++S ++H
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 6/229 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G++ YI ++ A+ ++ + ++F ++ ++ +SWN++ GY QN
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF QM P F V+ +C + L G++LH VL+ GF +NIF+ +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL+++YS I+AA K+F M+ + V WT++I G+ G A LFE + V
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+ + +++ V + EA F+ M K V N L YA D+
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTK--VYGLNQELEHYAAVADL 489
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/451 (38%), Positives = 256/451 (56%), Gaps = 10/451 (2%)
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ T PI LKS ++ + LR GE+LH LK N V T+L+ LY+ + A +
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 157 VFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYIDVRN 212
VF EM + V WT++I Y+ GD+ A R F D +++ + +
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 213 MIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ ++ + + V + Y G++ + + +F++M ++ +W ++GG
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG 328
YA+NG E LD F M EG + P+ + LSAC RLGALD + +++ +
Sbjct: 727 YASNGHPREALDLFLAMQAEG-MKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 785
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
N +G ALIDMYAKCG A VF M KD+I WN +I GL M G A +L +M+
Sbjct: 786 NPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQME 845
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
+G + TFIG+LC+CTH GL+++G YF +M Y I P+IEHYGCMVDLL+RAG L
Sbjct: 846 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLL 905
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA V MP+ A+AVI LLG C++++N ELAE L++L LEP N N+VMLSNIY
Sbjct: 906 QEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIY 965
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRW+D A++++ M+ G +K+P CS +E
Sbjct: 966 SNRGRWEDAAKLRLDMKAKGVEKVPACSWVE 996
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 156/374 (41%), Gaps = 19/374 (5%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITAC----AQLKQMTYARKMFDKITDQNVVSWNAMF 72
H + Q+ L+ + P ++T+ A+ + A+++FD++ + V W A+
Sbjct: 564 HPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALI 623
Query: 73 NGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
Y R V + P+ FT VL +C +I L GE + + G
Sbjct: 624 TAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVA 683
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
++FV TA ++LY + A +VF +M ++ V W +M+ GY S G A LF
Sbjct: 684 QSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAM 743
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----------YANNG 242
+ V+G + + A L Q + ++ W+ L YA G
Sbjct: 744 QAEGMKPDCYAVAGALSACTRLGALDLGRQAIR--MVDWDEFLDNPVLGTALIDMYAKCG 801
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
E +F++M ++++ WN +I G G ++ A + + V ND T + +L
Sbjct: 802 STVEAWVVFQQMRKKDIIVWNAMILGLGMTG-HEKIAFALVGQMEKSGVKLNDNTFIGLL 860
Query: 303 SACARLGAL-DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKD 360
+C G + D ++ H + + ++D+ ++ G+++ A + + M +
Sbjct: 861 CSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPAN 920
Query: 361 LITWNTIISGLAMH 374
+ ++ G +H
Sbjct: 921 AVILGALLGGCKIH 934
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 303/559 (54%), Gaps = 21/559 (3%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y+ +I ++ K + AR +FD++ +++ SWNAM +GY Q+ + + L ++ +
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D++ T +L +C + G +H +K+G + +FV LI+LY+ +
Sbjct: 246 DSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE-RDVILWNTIVSGY 207
KVF M R+++ W S+I Y + A LF+ + P+ +I +I+S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 208 IDVR--NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
D+R ++ L +D+ N ++ YA G V+ + +F +P +V SWN +
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GYA NG E ++ + M EG + N T V+VL AC++ GAL +H NG
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+V V +L DMY KCG +E+A+ +F + + + WNT+I+ HG G A+ LF
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM + G PD ITF+ +L AC+H GLV+EG F+ M DY I P ++HYGCMVD+ RA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G+L A+ F+K M ++ DA IW LL +CRV+ NV+L ++A E L E+EP++ V+LS
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN---EVVMLG----CLSRELDRK-S 557
N+Y G+W+ V I+ G +K PG SS+EV+ EV G + E+ R+ +
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 558 IVRAEANMIKLLPQNNHPL 576
++A+ MI +P + L
Sbjct: 722 ALQAKLKMIGYVPDHRFVL 740
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 256/507 (50%), Gaps = 29/507 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L++ K LH ++V S ++ I+ +++ L + AR FD I +++V +WN M
Sbjct: 67 LQSAKCLH---ARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 72 FNGYAQNEFHRTVVVLFTQ-MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+GY + V+ F+ M P+ TFP VLK+C + +G ++HCL LK G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFG 180
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +++V +LI LYS KA+ A +F EM R++ W +MI+GY G+ A L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 191 LAPERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
D + +++S + + I + + + + +S N ++ YA G +
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS-NKLIDLYAEFGRLR 299
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+C+++F+ M R++ SWN +I Y N + F+ M R+ P+ T++++ S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASIL 358
Query: 306 ARLGALDFSKWVHVYAEYNG-YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
++LG + + V + G + ++ +GNA++ MYAK G++++A VFN + D+I+W
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYF---- 419
NTIISG A +G + A+ +++ M+ GE+ + T++ +L AC+ G + +G+
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 420 -QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
+ +D +V + D+ + GRL +A+ ++P ++V W L+ +
Sbjct: 479 KNGLYLDVFVVTS------LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHG 531
Query: 479 NVELAELAL-ERLTELEPKNPANFVML 504
+ E A + E L E + FV L
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTL 558
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 22/230 (9%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +++ +GL ++ + + ++ A +F +I N V WN + + +
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
V+LF +M P+ TF +L +C + EG+ ++ + G ++
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELA 192
++++Y +E A K M + + +W ++ ++G + G I S LFE+
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH-LFEVE 650
Query: 193 PER---DVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTM 234
PE V+L N S G ++R++ + L + W++M
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL------RKTPGWSSM 694
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/609 (31%), Positives = 297/609 (48%), Gaps = 81/609 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q +++ SG + YI+ ++I + + A + I D V S++++ + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F++M +P+ P + K C +++A + G+++HC+ +G + FV
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS-ARCLFELAP---ER 195
+L +Y + A KVF M E++VV ++++ GY G + R L E+ E
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK------------------------------ 225
+++ WN I+SG+ EA +F +M
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275
Query: 226 ---------KDVISWNTMLSGYANNGDVEECKRLFEEMP--------------------- 255
KD + ML Y +G V +LF+E
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335
Query: 256 --------------ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
E NV SW +I G A NG E L+ F+ M G V PN TI ++
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNRVTIPSM 394
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L AC + AL + H +A +V VG+ALIDMYAKCG I+ + VFN M TK+L
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNL 454
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ WN++++G +MHG+ +S+F + PD I+F +L AC +GL +EG YF
Sbjct: 455 VCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNM 514
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M+ +Y I P++EHY CMV+LL RAG+L EA D +K +P E D+ +W LL SCR+ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVD 574
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAE+A ++L LEP+NP +V++SNIY G W +V I+ M G KK PGCS I+V
Sbjct: 575 LAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 542 EVV--MLGC 548
V +L C
Sbjct: 635 NKVYTLLAC 643
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 269/455 (59%), Gaps = 13/455 (2%)
Query: 98 PNCFTFPIVLKSCVKI-NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYK 156
P+ TFP +KS ++ + L G +LH LK +N V T+L+ LY+ + A K
Sbjct: 72 PSHLTFPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQK 131
Query: 157 VFGEMDER-NVVVWTSMINGYISCGD----IVSARCLFELAPERDVILWNTIVSGYIDVR 211
F EM + + V WT++I Y+ G I AR F D +++ V
Sbjct: 132 AFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVA 191
Query: 212 NMIEARKLFDQMPKKDVISWNTMLSG-----YANNGDVEECKRLFEEMPERNVFSWNGLI 266
+++ +++ +K+ I+ N ++ Y G++++ + +F++M ++V +W ++
Sbjct: 192 DLVTGEEVWTA-AEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMV 250
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GGYA+NG E L+ F M EG + P+ T+ LSAC RLGALD + V +++
Sbjct: 251 GGYASNGHPREALELFFAMQVEG-MRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEV 309
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
GN +G ALIDMYAKCG A VF M +D+I WN +I GL M G A +L +
Sbjct: 310 LGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQ 369
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
MK +G + TFIG+LC+CTH GLV++G YF++M Y I P+IEHYG MVDLL+RAG
Sbjct: 370 MKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAG 429
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
L EA ++ MP+EA+AV+W LLG C++++N +LAE L++L +LEP N N+V+LSN
Sbjct: 430 LLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSN 489
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
IY + GRW+D A++++ M+ G +K+P S +E++
Sbjct: 490 IYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVELD 524
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 10/259 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ T G+ + ++ + + +M AR +FDK+ +++VV+W AM GYA N
Sbjct: 198 EVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNG 257
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
R + LF M+ P+C+T L +C ++ AL G + ++ + N +GT
Sbjct: 258 HPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGT 317
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
ALI++Y+ + A+ VF +M R+++VW +MI G G A L + + L
Sbjct: 318 ALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGMTL 377
Query: 200 WNTIVSGYI----DVRNMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRL 250
+ G + + + R+ F M + + + M+ + G ++E +L
Sbjct: 378 NDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQL 437
Query: 251 FEEMP-ERNVFSWNGLIGG 268
++MP E N W L+GG
Sbjct: 438 IQDMPMEANAVVWGALLGG 456
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 207/318 (65%), Gaps = 1/318 (0%)
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D ++NT+++ YA G V + + LF+EMP RN SW+ ++ GY G E L F RM
Sbjct: 276 DASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ 335
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
+G V P+D +V VL+ACA+LG L+ KWVH Y + N + V +G AL+DMYAKCG +
Sbjct: 336 ADG-VRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEM 394
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+ A++VF M K+++ W T+I GLAMHGRG+ AL LF +M+ G PD I FIG LCAC
Sbjct: 395 QLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCAC 454
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
TH GLV++G F SM Y I P+IEHYGCMVDLLAR G L EA + V++MP++ DA+I
Sbjct: 455 THTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALI 514
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W L+ CR +KNVELAE ++ ELEP +V+L NIY GR I+ MR+
Sbjct: 515 WGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMRE 574
Query: 527 TGFKKLPGCSSIEVNEVV 544
G K PGCS++E+ V+
Sbjct: 575 KGVDKTPGCSTVEIKGVI 592
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 10/239 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ ++T AR +FD++ +N VSW+AM NGY Q R + LF +M+ P+
Sbjct: 283 LITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPD 342
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
VL +C ++ L +G+ +H + N R +F+GTAL+++Y+ ++ A +VF
Sbjct: 343 DTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFK 402
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIE 215
M E+NV+ WT+MI G G A LF L + D I + + + +
Sbjct: 403 VMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDK 462
Query: 216 ARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGG 268
R+LFD M +K + + M+ A NG + E + + E+MP + + W L+ G
Sbjct: 463 GRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAG 521
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 143/357 (40%), Gaps = 57/357 (15%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL----HC 124
NA+ A + + L+ + + P T P +LKS A+ L H
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHA 234
Query: 125 LVLKNGFRANIFVGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
+K G + V ALI +++ G+ + A + + + ++I Y G +
Sbjct: 235 HAVKLGLAGFLLVSNALIRVHAGILGR-LSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----- 237
AR LF+ P R+ + W+ +V+GY+ + EA LF +M V +T+L G
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 238 ----------------------------------YANNGDVEECKRLFEEMPERNVFSWN 263
YA G+++ +F+ M E+NV +W
Sbjct: 354 AQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT 413
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVH 318
+I G A +G E L+ F +M G V P+D + L AC G +D F V
Sbjct: 414 TMIKGLAMHGRGSEALELFSQMERLG-VKPDDIAFIGALCACTHTGLVDKGRELFDSMVR 472
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
Y G + + ++D+ A+ G++ A ++ M K D + W +++G H
Sbjct: 473 KY----GIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 42/268 (15%)
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR----LGALDFSKWVH 318
N LI A + L + +L G P T+ ++L + A GA + VH
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGH-HPTPHTLPSLLKSLALSPAVPGARGLALAVH 233
Query: 319 VYAEYNGYQGNVCVGNALIDMYAK-CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR- 376
+A G G + V NALI ++A G + +A+ + + + D T+NT+I+ A GR
Sbjct: 234 AHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 377 ------------------------------GAGALSLFHEMKNAGEMPDGITFIGILCAC 406
G AL LF M+ G PD +G+L AC
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+G++E+G + +I + +VD+ A+ G + A++ K M E + +
Sbjct: 354 AQLGVLEQG-KWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK-EKNVLA 411
Query: 467 WANLLGSCRVYKNVELAELALERLTELE 494
W ++ ++ ALE +++E
Sbjct: 412 WTTMIKGLAMHGR---GSEALELFSQME 436
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ A+ +M A ++F + ++NV++W M G A + + LF+QM++L
Sbjct: 379 FLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERL 438
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
P+ F L +C + +G EL +V K G + I +++L + +
Sbjct: 439 GVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNE 498
Query: 154 AYKVFGEMDER-NVVVWTSMING 175
A ++ +M + + ++W +++ G
Sbjct: 499 AREMVEKMPMKPDALIWGALMAG 521
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 295/532 (55%), Gaps = 8/532 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++ S Y+ ++ + +M+YA ++FD++ +++ ++WN+M G+ QN
Sbjct: 133 EIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNG 192
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + F ++ + P+ + +L + ++ L G+E+H +KN +N+ +G
Sbjct: 193 LYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGN 252
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER---- 195
LI++YS + A VF +M ++++ WT++I Y A L +
Sbjct: 253 TLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDV 312
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK---DVISWNTMLSGYANNGDVEECKRLFE 252
D ++ + + +R + A+++ K+ D++ N ++ YA+ G++ R+FE
Sbjct: 313 DTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFE 372
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ ++V SW +I Y +NGL E L F ++ E V P+ T+V++LSA A L AL+
Sbjct: 373 SIKCKDVVSWTSMISCYVHNGLANEALGVF-YLMKETSVEPDSITLVSILSAAASLSALN 431
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +H + G+ N+L+DMYA CG +ENA VF +K L+ W T+I+
Sbjct: 432 KGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYG 491
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
MHGRG A+ LF M++ +PD ITF+ +L AC+H GL+ EG ++M Y + P
Sbjct: 492 MHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWP 551
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHY C+VDLL RA L EA FVK M IE A +W LG+CR++ N +L E+A ++L +
Sbjct: 552 EHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLD 611
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L+P +P ++V++SN++ GRWKDV +++ M+ G KK PGCS IEV V
Sbjct: 612 LDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKV 663
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 197/394 (50%), Gaps = 15/394 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN-VVSWNAMFNGYAQN 78
+I ++ G + ++ +++ A+ + ARK+FD++ ++N VVSWN++ + Y+ N
Sbjct: 31 EIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLN 90
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ LF +M+K N +T L++C + + G E+H +LK+ +++V
Sbjct: 91 GQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVA 150
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELA 192
AL+ ++ + A ++F E+DE++ + W SMI G+ G A F L
Sbjct: 151 NALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLK 210
Query: 193 PERDVILWNTIVS----GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECK 248
P+ +V L + + + GY+ I A + + + I NT++ Y+ V
Sbjct: 211 PD-EVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIG-NTLIDMYSKCCCVAYAG 268
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F++M +++ SW +I YA N E L +++ T+G + + I + L AC+ L
Sbjct: 269 LVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKG-MDVDTMMIGSTLLACSGL 327
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
L +K VH Y G ++ + N +ID+YA CG I A +F S+ KD+++W ++I
Sbjct: 328 RCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMI 386
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
S +G AL +F+ MK PD IT + I
Sbjct: 387 SCYVHNGLANEALGVFYLMKETSVEPDSITLVSI 420
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 201/459 (43%), Gaps = 101/459 (22%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
M+ L + FTFP VLK+C + + G E+H L++K G+ + +FV +L+ +Y+
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 151 IEAAYKVFGEMDERN-VVVWTSMINGYISCGDIVSARCLF-------------------- 189
I A K+F M+ERN VV W S+I+ Y G + A LF
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 190 --------ELAPE-----------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS 230
+L E DV + N +V+ ++ M A ++FD++ +KD I+
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
WN+M++G+ NG E + F + + N
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDAN-------------------------------- 208
Query: 291 VFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAV 350
+ P++ +++++L+A RLG L K +H YA N N+ +GN LIDMY+KC + A
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAG 268
Query: 351 DVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT--- 407
VF+ M KDLI+W T+I+ A + AL L +++ G D + L AC+
Sbjct: 269 LVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLR 328
Query: 408 --------HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
H ++ GLS M ++D+ A G + A + +
Sbjct: 329 CLSHAKEVHGYTLKRGLSDLMMQNM-------------IIDVYADCGNINYATRMFESIK 375
Query: 460 IEADAVIWANLLGSCRVYK---NVELAELALERLTELEP 495
+ D V W +++ SC V+ N L L + T +EP
Sbjct: 376 CK-DVVSWTSMI-SCYVHNGLANEALGVFYLMKETSVEP 412
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 298/531 (56%), Gaps = 8/531 (1%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I V+ S + ++ +I A+ +M A +F + D + +SWN+M +G+ QN
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 363
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + + +M+ P+ ++ + + G ++H +KNG +++ VG +
Sbjct: 364 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNS 423
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERD 196
L+++Y+ +++ +F +M +++VV WT++I G+ G A LF + D
Sbjct: 424 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 483
Query: 197 VILWNTIV---SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
V++ ++I+ SG + ++ E + D++ N ++ Y G+V+ R+FE
Sbjct: 484 VMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFEL 543
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
+ ++V SW +I Y +NGL E L+ F ++ E V P+ ++V++LSA A L AL
Sbjct: 544 IEFKDVVSWTSMISCYVHNGLANEALELF-HLMKETGVEPDSISLVSILSAAASLSALKK 602
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K +H + G+ + + L+DMYA+CG +E + +VFN + KDL+ W ++I+ M
Sbjct: 603 GKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGM 662
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G A+ LF M++ PD I F+ +L AC+H GL+ EG + +SM +Y + P E
Sbjct: 663 HGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPE 722
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY C+VDLL RA L EA FVK M +E A +W LLG+C+++ N EL E+A ++L E+
Sbjct: 723 HYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEM 782
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+P+NP N+V++SN+Y RWKDV +++ M+ +G KK PGCS IEV V
Sbjct: 783 DPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKV 833
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 239/494 (48%), Gaps = 26/494 (5%)
Query: 19 HQIQTQVVTS-GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
Q+ ++TS L S +++ R++ + + A K+FD + + + +WNAM Y
Sbjct: 98 QQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVT 157
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N + L+ +M+ + TFP +LK+C + R G E+H L +K G+ + +FV
Sbjct: 158 NGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFV 217
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDIVSARCLF------E 190
+++ +Y+ + A ++F M E+ +VV W SMI+ Y S G + A LF
Sbjct: 218 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS 277
Query: 191 LAPERDVI---LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LAP L S +I I A L +V N +++ YA G + E
Sbjct: 278 LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY-YINVFVANALIAMYARFGKMGEA 336
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+F M + + SWN ++ G+ NGL+ E L + M G+ P+ ++++++A AR
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK-PDLVAVISIIAASAR 395
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
G +H YA NG ++ VGN+L+DMYAK ++ +F+ M KD+++W TI
Sbjct: 396 SGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTI 455
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G A +G + AL LF E++ G D + IL AC+ + L+ + S +
Sbjct: 456 IAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLI-SSVKEIHSYIIRKG 514
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRM--PIE-ADAVIWANLLGSCRVYK---NVE 481
+ + G +VD+ G VD+ RM IE D V W +++ SC V+ N
Sbjct: 515 LSDLVLQNG-IVDVYGECGN----VDYAARMFELIEFKDVVSWTSMI-SCYVHNGLANEA 568
Query: 482 LAELALERLTELEP 495
L L + T +EP
Sbjct: 569 LELFHLMKETGVEP 582
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 248/542 (45%), Gaps = 84/542 (15%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNA 70
L+ ++ ++ + G ++ I+ + + AR++FD++ + ++VVSWN+
Sbjct: 193 LKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNS 252
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
M + Y+ N + LF +M+K PN +TF L++C + +++G +H VLK+
Sbjct: 253 MISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS 312
Query: 131 FRANIFVGTALIELYST-GKAIEAAYKVFGEMDERNVVVWTSMINGYISCG--------- 180
+ N+FV ALI +Y+ GK EAA +F MD+ + + W SM++G++ G
Sbjct: 313 YYINVFVANALIAMYARFGKMGEAA-NIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 181 ----------DIV--------SARCLFEL------------APERDVILWNTIVSGYIDV 210
D+V SAR L + D+ + N++V Y
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
+M +FD+MP KDV+SW T+++G+A NG LF E+
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLE------------- 478
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G+ +V+ I ++L AC+ L + K +H Y G ++
Sbjct: 479 --GIDLDVM-----------------MISSILLACSGLKLISSVKEIHSYIIRKGLS-DL 518
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
+ N ++D+Y +CG ++ A +F ++ KD+++W ++IS +G AL LFH MK
Sbjct: 519 VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKET 578
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
G PD I+ + IL A + +++G + V + +VD+ AR G L +
Sbjct: 579 GVEPDSISLVSILSAAASLSALKKG-KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEK 637
Query: 451 A---VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
+ +F++ D V+W +++ + ++ A + L R E E P + ++ +
Sbjct: 638 SRNVFNFIRN----KDLVLWTSMINAYGMH-GCGRAAIDLFRRMEDESIAPDHIAFVAVL 692
Query: 508 YG 509
Y
Sbjct: 693 YA 694
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 191/440 (43%), Gaps = 84/440 (19%)
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFT----FPIVLKSCVKINALREGEELHC-LVLKNGFR 132
NE +++ LF P+ F+ + VL+ C AL EG+++H ++ N
Sbjct: 57 NEAFQSLTDLFANQS-----PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALF 111
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE-- 190
++F+ T L+ +Y + A K+F M + + W +MI Y++ G+ + + L+
Sbjct: 112 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 171
Query: 191 --------------------LAPERD-----------------VILWNTIVSGYIDVRNM 213
L +R V + N+IV Y ++
Sbjct: 172 RVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDL 231
Query: 214 IEARKLFDQMP-KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
AR+LFD+MP K+DV+SWN+M+S Y++NG E RLF EM
Sbjct: 232 NGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM------------------ 273
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
+ + PN T V L AC + ++H + Y NV V
Sbjct: 274 --------------QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NALI MYA+ G + A ++F +MD D I+WN+++SG +G AL +HEM++AG+
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
PD + I I+ A G G+ + AM + ++ +VD+ A+ +
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQ-IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 438
Query: 453 DFVKRMPIEADAVIWANLLG 472
+MP + D V W ++
Sbjct: 439 CIFDKMP-DKDVVSWTTIIA 457
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 152/314 (48%), Gaps = 10/314 (3%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S + T H QI + +GL+ + ++ A+ M Y +FDK+ D++VV
Sbjct: 391 AASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVV 450
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
SW + G+AQN H + LF +++ + +L +C + + +E+H +
Sbjct: 451 SWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYI 510
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
++ G +++ + ++++Y ++ A ++F ++ ++VV WTSMI+ Y+ G A
Sbjct: 511 IRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEAL 569
Query: 187 CLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSGY 238
LF L E D I +I+S + + + +++ + +K + +T++ Y
Sbjct: 570 ELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMY 629
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G +E+ + +F + +++ W +I Y +G +D F+RM E + P+
Sbjct: 630 ARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDES-IAPDHIAF 688
Query: 299 VTVLSACARLGALD 312
V VL AC+ G ++
Sbjct: 689 VAVLYACSHSGLMN 702
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 294/534 (55%), Gaps = 24/534 (4%)
Query: 32 KSDYITPRIITACAQLKQMTYAR-------KMFDKITDQNVVSWNAMFNGYAQNEFHRTV 84
K+ Y+ + C + R K+F+K+ ++N V+W M Q +
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEA 255
Query: 85 VVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+ LF +M P+ FT V+ +C + L G++LH +++G + VG LI +
Sbjct: 256 IDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINM 315
Query: 145 Y---STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG-------DIVSARCLFELAPE 194
Y S ++ AA K+F ++ + NV WT+MI GY+ G D+ L + P
Sbjct: 316 YAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPN 375
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNTMLSGYANNGDVEECKRL 250
+++ + ++ + ++F K S N+++S YA +G +++ ++
Sbjct: 376 H--FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKA 433
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ + E+N+ S+N +I YA N E L+ F + +G + + T ++LS A +G
Sbjct: 434 FDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG-MGASAFTFASLLSGAASIGT 492
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+ + +H +G + N V NALI MY++CG IE+A VF M+ +++I+W +II+G
Sbjct: 493 IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITG 552
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A HG AL LFH+M G P+ +T+I +L AC+H+GLV EG +F+SM ++ ++P
Sbjct: 553 FAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIP 612
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++EHY CMVD+L R+G L+EA+ F+ MP +ADA++W LG+CRV+ N+EL + A + +
Sbjct: 613 RMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMI 672
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
E EP +PA +++LSN+Y +W +V+ I+ AM++ K GCS +EV V
Sbjct: 673 IEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKV 726
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 205/410 (50%), Gaps = 16/410 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI-TDQNVVSWNAMFNGYAQNE 79
+ ++ S L+ +I+ ++ Q A +F + + ++++SW+AM + +A N
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNN 147
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF-RANIFVG 138
++ F M + PN + F ++C + G+ + V+K G+ ++++ VG
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVG 207
Query: 139 TALIELYSTGKA-IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-EL---AP 193
LI+++ G+ + +A+KVF +M ERN V WT MI + G A LF E+
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY 267
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYAN---NGDVEE 246
E D + ++S ++ ++ ++L Q + D +++ YA +G +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLF-FEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+++F+++ + NVFSW +I GY G + E LD F+ M+ V PN T + L AC
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT-HVIPNHFTFSSTLKAC 386
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A L AL + V +A G+ CV N+LI MYA+ G I++A F+ + K+LI++N
Sbjct: 387 ANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYN 446
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEG 415
T+I A + AL LF+E+++ G TF +L +G + +G
Sbjct: 447 TVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 139/294 (47%), Gaps = 13/294 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ T V G + + +I+ A+ ++ ARK FD + ++N++S+N + + YA+N
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +++ + FTF +L I + +GE++H V+K+G + N V
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
ALI +YS IE+A++VF +M++RNV+ WTS+I G+ G A LF E V
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI-----SWNTMLSGYANNGDVEECKRL 250
+ + ++S V + E K F M + + + M+ +G + E +
Sbjct: 577 NLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQF 636
Query: 251 FEEMPER-NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
MP + + W +G +G E+ +M+ E P+D +LS
Sbjct: 637 INSMPYKADALVWRTFLGACRVHG-NLELGKHAAKMIIEQE--PHDPAAYILLS 687
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
NNG + + + M+ +G P+ T L C R + D VH + Q +
Sbjct: 43 NNGRLHKAISTLEHMVHQGS-HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSM-DTKDLITWNTIISGLAMHGRGAGALSLFHEMKN 389
N+LI +Y+KCG E A +F M ++DLI+W+ ++S A + G AL F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 390 AGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGC-MVDLLARA-GR 447
G P+ F AC+ V G S F + + GC ++D+ + G
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIF-GFVVKTGYLQSDVCVGCGLIDMFVKGRGD 220
Query: 448 LAEAVDFVKRMPIEADAVIW 467
L A ++MP E +AV W
Sbjct: 221 LVSAFKVFEKMP-ERNAVTW 239
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 264/500 (52%), Gaps = 66/500 (13%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +F I + + WN M +A+++ + F QM D+ P+ T+ +L +C
Sbjct: 79 AHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTS 138
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+LREG+++H VL NG+ YS+ NV + + +
Sbjct: 139 SLSLREGQQVHSKVLTNGY-------------YSS-----------------NVFLMSKL 168
Query: 173 INGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
+N Y + +V G + + ARK+FD M +++V+ WN
Sbjct: 169 VNFYAA------------------------VVGG--EGAALASARKVFDDMSERNVVCWN 202
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+ML+GY G+++ +R+F EMPERNV SW +I GYA NG + L+ F +M G V
Sbjct: 203 SMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAG-VE 261
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGN----VCVGNALIDMYAKCGIIEN 348
+ ++ L+ACA LG L W+H Y + N V + NALI MYA CG+I+
Sbjct: 262 LDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMIDE 321
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG---EMPDGITFIGILCA 405
A +VF M + ++W ++I+ A G L +F M+ G PDGITFIG+LCA
Sbjct: 322 AYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCA 381
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C+H GLV+EG F+ M + I P+IEHYGCMVDLL+RAG L EA + + MP++ +
Sbjct: 382 CSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVKPNNA 441
Query: 466 IWANLLGSCRVYKNVELAELALERL-TELEPKNPANFV-MLSNIYGDLGRWKDVARIKVA 523
+W LLG CR Y+N ELA L ++L E +P A ++ +L+ +Y +W+DVA ++
Sbjct: 442 VWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVATVRQK 501
Query: 524 MRDTGFKKLPGCSSIEVNEV 543
M G KK G S +++NEV
Sbjct: 502 MVAMGVKKPAGQSWVQINEV 521
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 26/208 (12%)
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF + + I WN +I A A ++ F++M PD T+ +L ACT
Sbjct: 82 VFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTSSLS 141
Query: 412 VEEGLS---------YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
+ EG Y+ S S + + Y +V LA A M E
Sbjct: 142 LREGQQVHSKVLTNGYYSSNVFLMSKL--VNFYAAVVG--GEGAALASARKVFDDMS-ER 196
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+ V W ++L N++ A E+ +N ++ + + Y G+ K +
Sbjct: 197 NVVCWNSMLAGYMRRGNLDGAR---RIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFD 253
Query: 523 AMRDTGFKKLPGCSSIEVNEVVMLGCLS 550
MR G +E+++VV+L L+
Sbjct: 254 QMRKAG---------VELDQVVLLAALT 272
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 201/616 (32%), Positives = 301/616 (48%), Gaps = 103/616 (16%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ-MKKLDAMPNCFTFPIVLKSCVKINA 115
FD I +++V +WN M +GY + V+ F+ M P+ TFP VLK+C
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RT 98
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
+ +G ++HCL LK GF +++V +LI LYS KA+ A +F EM R++ W +MI+G
Sbjct: 99 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158
Query: 176 YISCGDIVSARCL----------------------------------------------- 188
Y G+ A L
Sbjct: 159 YCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRD 218
Query: 189 ----FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------PK------------- 225
F+ RD+I WN+I+ Y + A LF +M P
Sbjct: 219 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 278
Query: 226 ---------------------KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+D+ N ++ YA G V+ + +F +P +V SWN
Sbjct: 279 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 338
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
+I GYA NG E ++ + M EG + N T V+VL AC++ GAL +H N
Sbjct: 339 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 398
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G +V V +L DMY KCG +E+A+ +F + + + WNT+I+ HG G A+ LF
Sbjct: 399 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 458
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
EM + G PD ITF+ +L AC+H GLV+EG F+ M DY I P ++HYGCMVD+ R
Sbjct: 459 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 518
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG+L A+ F+K M ++ DA IW LL +CRV+ NV+L ++A E L E+EP++ V+L
Sbjct: 519 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 578
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN---EVVMLG----CLSRELDRK- 556
SN+Y G+W+ V I+ G +K PG SS+EV+ EV G + E+ R+
Sbjct: 579 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 638
Query: 557 SIVRAEANMIKLLPQN 572
+ ++A+ MI +P +
Sbjct: 639 TALQAKLKMIGYVPDH 654
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 95/230 (41%), Gaps = 22/230 (9%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +++ +GL ++ + + ++ A +F +I N V WN + + +
Sbjct: 390 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 449
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
V+LF +M P+ TF +L +C + EG+ + G ++
Sbjct: 450 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 509
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELA 192
++++Y +E A K M + + +W ++ ++G + G I S LFE+
Sbjct: 510 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH-LFEVE 568
Query: 193 PER---DVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTM 234
PE V+L N S G ++R++ + L + W++M
Sbjct: 569 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL------RKTPGWSSM 612
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/534 (36%), Positives = 281/534 (52%), Gaps = 69/534 (12%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQN--VVSWNAMFNGY 75
L QI QVVT L + +T +I K AR +FD + + WN M Y
Sbjct: 90 LQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVMIRTY 149
Query: 76 AQNEFHRTVVVLFTQMKKLDA----MPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
++ + + LF +M LD +P+ +TF V+ SC +L GE +H
Sbjct: 150 SKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVH-------- 201
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
G +++ + E N+ V S+IN C V AR
Sbjct: 202 ----------------GMVVKSGF-------ESNLYVGNSVIN---MCS--VFAR----- 228
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
M +ARK+F+QM ++DV SW ++L GYA +G+++ LF
Sbjct: 229 ---------------------MEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELF 267
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
MP RN SW +I G+ G + E L F ML + RV PN+A +V VLSACA LGAL
Sbjct: 268 NMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHLGAL 327
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D W+H+Y + G + + + ALIDMYAKCG I+ A VFN + +D++++ ++ISGL
Sbjct: 328 DQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGL 387
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ HG G AL +F++M + MP+ IT +G+L C+H GLVEEG S +M + I P+
Sbjct: 388 SYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGIAPK 447
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGC +DLL RAG L A++ VK MP+E D VIW LL + R++ NV L E + +
Sbjct: 448 IEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISHIG 507
Query: 492 ELEPKNP-ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+L+ + V+LSN+Y LGRW+ V ++ M D + PGCS IEVN +V
Sbjct: 508 QLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLV 561
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 307/551 (55%), Gaps = 23/551 (4%)
Query: 9 SEQLETTKHLHQ--IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
S+ L+ + LH ++TQ+ LE + +IT A+ + + ARK FD++ + +V
Sbjct: 71 SKDLKQGQLLHAMILETQL----LEFDIILGTALITMYARCRDLELARKTFDEMGKKTLV 126
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQM--KKLDAM-PNCFTFPIVLKSCVKINALREGEELH 123
+WNA+ GY++N HR + ++ M K + M P+ TF L +C + + +G E+
Sbjct: 127 TWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIE 186
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+ +G+ ++ V ALI +YS ++E+A KVF + R+V+ W +MI+GY G
Sbjct: 187 ARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAAT 246
Query: 184 SARCLFELA----PERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTML 235
A LF+ P+ +V+ + +++ ++ ++ + R + ++ + D++ N +L
Sbjct: 247 QALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLL 306
Query: 236 SGYAN-NGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+ Y + +EE +++FE + R+V +WN LI Y G + LD FK+M E V PN
Sbjct: 307 NMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN-VAPN 365
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ T+ VLSACA LGA K VH + +V + N+L++MY +CG +++ V VF
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFA 425
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
++ K L++W+T+I+ A HG L F E+ G D +T + L AC+H G+++E
Sbjct: 426 AIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE 485
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G+ F SM D+ + P H+ CMVDLL+RAGRL A + + MP DAV W +LL C
Sbjct: 486 GVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545
Query: 475 RVYKNVELAELALERLTELEPKNPANFV-MLSNIYGDLGRWKDVARIKVAMRDTGFKKLP 533
+++ + + A ++L ELE ++ + V +LSN+Y + GRW DV + + +K P
Sbjct: 546 KLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARKNP 602
Query: 534 GCSSIEVNEVV 544
GCS IE+N+ V
Sbjct: 603 GCSYIEINDTV 613
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 192/377 (50%), Gaps = 16/377 (4%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +F I N VSW + +A+N +R + + +M P+ F + + C
Sbjct: 11 ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSS 70
Query: 113 INALREGEELHCLVLKNG-FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
L++G+ LH ++L+ +I +GTALI +Y+ + +E A K F EM ++ +V W +
Sbjct: 71 SKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNA 130
Query: 172 MINGYISCGDIVSARCLFE----LAPE---RDVI-----LWNTIVSGYIDVRNMIEARKL 219
+I GY GD A +++ +PE D I L+ V G I IEAR +
Sbjct: 131 LIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTV 190
Query: 220 FDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
D I N +++ Y+ G +E +++F+ + R+V +WN +I GYA G + L
Sbjct: 191 ASGYA-SDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM 339
+ F+RM PN T + +L+AC L L+ + +H + +GY+ ++ +GN L++M
Sbjct: 250 ELFQRM-GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNM 308
Query: 340 YAKC-GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
Y KC +E A VF + T+D+ITWN +I +G+ AL +F +M+ P+ IT
Sbjct: 309 YTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEIT 368
Query: 399 FIGILCACTHMGLVEEG 415
+L AC +G +G
Sbjct: 369 LSNVLSACAVLGAKRQG 385
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G V + +F + N SW ++ +A NG + E L ++RM+ EG + P+ A
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGAM 60
Query: 298 IVTVLSACARLGALDFSKWVH-VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
V + C+ L + +H + E + ++ +G ALI MYA+C +E A F+ M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA---GEMPDGITFIGILCACTHMGLVE 413
K L+TWN +I+G + +G GAL ++ +M + G PD ITF L AC+ +G +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 414 EGLSY-FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+G +++A Y+ +++ ++++ ++ G L A R+ D + W ++
Sbjct: 181 QGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMIS 237
Query: 473 SCRVYKNVELAELALERLTELEPKNP 498
Y A ALE + P +P
Sbjct: 238 G---YAKQGAATQALELFQRMGPNDP 260
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG + +A+ VF++++ + ++W I++ A +G AL + M G PDG
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 399 FIGILCACTHMGLVEEG 415
F+ + C+ +++G
Sbjct: 61 FVVAIGVCSSSKDLKQG 77
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 280/502 (55%), Gaps = 13/502 (2%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
AR++FD++ ++N V+W M +GYA +F M++ + N F F VL +
Sbjct: 165 AREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAV 224
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ G+++HCL +K G + + AL+ +Y+ +++ + +VF +++N + W++M
Sbjct: 225 PEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAM 284
Query: 173 INGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK- 225
I GY GD A LF + P ++ +++ D + E +++ + + K
Sbjct: 285 ITGYAQSGDSHKALKLFSRMHFAGINPSEFTLV--GVLNACSDACAVEEGKQVHNYLLKL 342
Query: 226 ---KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
+ ++ YA +G E+ ++ F + + ++ W +I GY NG + L +
Sbjct: 343 GFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLY 402
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
RM EG + PN+ T+ +VL AC+ L A D + +H G V +G+AL MYAK
Sbjct: 403 CRMQMEG-ILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAK 461
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG +E VF M +D+I+WN +ISGL+ +G G AL LF EM+ PD +TF+ +
Sbjct: 462 CGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNV 521
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+HMGLV+ G YF+ M ++ ++P++EHY CMVD+L+RAG+L EA +F++ I+
Sbjct: 522 LSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDH 581
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+W LLG+CR Y+N EL A E+L EL + + +V+LS IY LGR +DV R++
Sbjct: 582 GLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRS 641
Query: 523 AMRDTGFKKLPGCSSIEVNEVV 544
M+ G K PGCS IE+ V
Sbjct: 642 MMKVRGVSKEPGCSWIELKSNV 663
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 244/471 (51%), Gaps = 17/471 (3%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H + L+ + LH ++ +S Y+ +I A+ + A+ +FD+I +++V+S
Sbjct: 19 HQKSLQKGRALHAQIIKLASSS--SCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVIS 76
Query: 68 WNAMFNGYAQN--EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
WN + NGY+Q V+ LF +M+ + +PN TF + + ++++ G++ H +
Sbjct: 77 WNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAV 136
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K ++FVG++L+ +Y + A +VF M ERN V W +MI+GY A
Sbjct: 137 AIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEA 196
Query: 186 RCLFELA--PERDV--ILWNTIVSGYIDVRNMIEARKLFDQMPKKD-----VISWNTMLS 236
+FEL E DV + +++S + V +++ K + K + N +++
Sbjct: 197 FEVFELMRREEEDVNEFAFTSVLSA-LAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVT 255
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA G +++ ++FE ++N +W+ +I GYA +G + L F RM G + P++
Sbjct: 256 MYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAG-INPSEF 314
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+V VL+AC+ A++ K VH Y G++ + + AL+DMYAK G+ E+A FN +
Sbjct: 315 TLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYL 374
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
DL+ W ++I+G +G ALSL+ M+ G +P+ +T +L AC+++ ++G
Sbjct: 375 QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGR 434
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ + Y + ++ + + A+ G L E +RMP E D + W
Sbjct: 435 Q-IHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP-ERDIISW 483
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 83/395 (21%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI V +GL I ++T A+ + + ++F+ D+N ++W+AM GYAQ+
Sbjct: 233 QIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSG 292
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF++M P+ FT VL +C A+ EG+++H +LK GF + +++ T
Sbjct: 293 DSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMT 352
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG---DIVSARCLFELA---P 193
AL+++Y+ E A K F + + ++V+WTSMI GY+ G D +S C ++ P
Sbjct: 353 ALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILP 412
Query: 194 ER---------------------------------DVILWNTIVSGYIDVRNMIEARKLF 220
+V + + + + Y N+ E +F
Sbjct: 413 NELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVF 472
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+MP++D+ISWN M+SG + NG +E LFEEM +++
Sbjct: 473 RRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQD---------------------- 510
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN--GYQGNVCVGNALID 338
P+D T V VLSAC+ +G +D S W++ ++ G V ++D
Sbjct: 511 ----------TKPDDVTFVNVLSACSHMGLVD-SGWLYFRMMFDEFGLLPKVEHYACMVD 559
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
+ ++ G + A K+ I TI GL +
Sbjct: 560 VLSRAGKLYEA---------KEFIESTTIDHGLCL 585
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 122/242 (50%), Gaps = 5/242 (2%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFE--VLDAFKRMLTEG 289
N++++ YA + + K +F+ + ++V SWN LI GY+ G V++ F+RM +
Sbjct: 47 NSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRAD- 105
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ PN T + +A + L ++ F + H A +V VG++L++MY K G++ A
Sbjct: 106 NILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEA 165
Query: 350 VDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+VF+ M ++ +TW T+ISG A+ A +F M+ E + F +L A
Sbjct: 166 REVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVP 225
Query: 410 GLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWAN 469
V+ G +A+ ++ + +V + A+ G L +++ V M + +++ W+
Sbjct: 226 EFVDSG-KQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQ-VFEMSNDKNSITWSA 283
Query: 470 LL 471
++
Sbjct: 284 MI 285
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/371 (42%), Positives = 236/371 (63%), Gaps = 5/371 (1%)
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWNTIVSGYIDVRNMIEARKLFDQ 222
R+V V ++ ++ Y D+ SA LF + DV+ W T+V+G+ + ++ AR FD
Sbjct: 105 RDVYVLSAAVSAYFRATDVASAERLFSYTKDVADVVTWTTMVTGHANTGDLERARWFFDA 164
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP+++V+SWN ML YA+ G + + ++LF+ MP RN SW+ ++ G + E L F
Sbjct: 165 MPERNVVSWNAMLGAYASAGMLSKARKLFDIMPSRNAASWSSMVTGLVRSNRCEEALRVF 224
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
M+ G V PN++ +V+ +SAC+ L +L+ WVH YA+ ++ + A++DMY K
Sbjct: 225 SEMIGMG-VVPNESALVSAVSACSLLRSLEHGVWVHAYAKRELQGMSLVLATAIVDMYGK 283
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGI 402
CG I NAV VF +M K++ +WN++I+GLAM+GR ALSLF +M+ AG P+ ITFIG+
Sbjct: 284 CGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFIGL 343
Query: 403 LCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA 462
L AC+H GLV+EG F M + I P EHYG MVDLL RAG + EAVDFV MP+E
Sbjct: 344 LGACSHSGLVDEGRWLFNMMVNGFGIQPVQEHYGLMVDLLGRAGHVREAVDFVNSMPVEP 403
Query: 463 DAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKV 522
+W L G+C+++ VEL E ++L ELEP++ + +++LSNIYG RW D+A ++
Sbjct: 404 HPGLWGALAGACKIHGEVELGEEIAKKLIELEPRHGSRYILLSNIYGASNRWDDMATVRR 463
Query: 523 AMRDTGFKKLP 533
++D +K+P
Sbjct: 464 LLKD---RKVP 471
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 24/245 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++ A A ++ ARK+FD + +N SW++M G ++ + +F++M + +PN
Sbjct: 176 MLGAYASAGMLSKARKLFDIMPSRNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPN 235
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
+ +C + +L G +H + ++ + TA++++Y I A +VF
Sbjct: 236 ESALVSAVSACSLLRSLEHGVWVHAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFA 295
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF---ELAPER--DV----ILWNTIVSGYIDV 210
M +N+ W SMI G G + A LF ++A R D+ +L SG +D
Sbjct: 296 AMPVKNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVD- 354
Query: 211 RNMIEARKLFDQM-------PKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSW 262
E R LF+ M P ++ + M+ G V E MP E + W
Sbjct: 355 ----EGRWLFNMMVNGFGIQPVQE--HYGLMVDLLGRAGHVREAVDFVNSMPVEPHPGLW 408
Query: 263 NGLIG 267
L G
Sbjct: 409 GALAG 413
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
++T A + AR FD + ++NVVSWNAM YA + +L K D MP
Sbjct: 145 MVTGHANTGDLERARWFFDAMPERNVVSWNAMLGAYA------SAGMLSKARKLFDIMPS 198
Query: 99 -NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
N ++ ++ V+ N E + ++ G N + + S +++E V
Sbjct: 199 RNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPNESALVSAVSACSLLRSLEHGVWV 258
Query: 158 FG----EMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
E+ ++V+ T++++ Y CG I +A +F P +++ WN++++G
Sbjct: 259 HAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGLAMNGRE 318
Query: 214 IEARKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKRLFEEM 254
++A LF +M V I++ +L +++G V+E + LF M
Sbjct: 319 MQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMM 363
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 304/594 (51%), Gaps = 99/594 (16%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I+ C + A+ +FD++ +N V++NAM GY QN V LF +M + D
Sbjct: 48 ISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERD----I 103
Query: 101 FTFPIVLKSCVKINALREGEELHCLV----------LKNGFRANIFVGTAL--------- 141
F++ ++ +K + E+ + + +G+ +N +G AL
Sbjct: 104 FSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLK 163
Query: 142 ---------IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
L GK ++ A + F EM R++ WT+MI+G S G IV AR LFE
Sbjct: 164 DVVSWNLVIAGLVGVGK-VDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDM 222
Query: 193 PERDVILWNTIVSGYID-----------------------------VRN--MIEARKLFD 221
P RDV WNT+++GYI+ VRN + +A +LF
Sbjct: 223 PVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLFV 282
Query: 222 QMPKK-------------------------------DVISWNTMLSGYANNGDVEECKRL 250
+MP+K D +SW ++ GY G+V+ +
Sbjct: 283 EMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSI 342
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FE MP R+ +WN +I G N E L F +M EG FP++AT +VL+ C+ L
Sbjct: 343 FELMPARDATAWNVIIWGLGENDHGEEGLKFFVKM-KEGGPFPDEATFTSVLTICSDLPT 401
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L + +H G+ V V NA++ +YA+CG +A+ +F++M + D I+WN+II G
Sbjct: 402 LHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIICG 461
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
LA +G G A+ +F +M++ P+ ITF+G+L AC+H GLV++G YF M + P
Sbjct: 462 LAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEP 521
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMP---IEADAVIWANLLGSCRVYKNVELAELAL 487
IEHY C+VDLL R G + EA+ F+++M +E A +W +LG+CR++KN+++ E+A
Sbjct: 522 TIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVGEIAG 581
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ER+ E+EP N +++L+ +Y G+ +D R+ V MR+ G KK P CS +EVN
Sbjct: 582 ERILEIEPHNSGVYIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVN 635
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 150/385 (38%), Gaps = 63/385 (16%)
Query: 30 LEKSDYITP----RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
LEKS + +I + ++ A +F+ + ++ +WN + G +N+ +
Sbjct: 312 LEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGL 371
Query: 86 VLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY 145
F +MK+ P+ TF VL C + L G ++H V K GF + V A++ LY
Sbjct: 372 KFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLY 431
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
+ +A +F M + + W S+I G G+ V A +FE D+
Sbjct: 432 ARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDI-------- 483
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-----ERNVF 260
K + I++ +LS ++ G V++ K F+ M E +
Sbjct: 484 -------------------KPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIE 524
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC-----ARLGALDFSK 315
+ ++ GL E + ++M G P + VL AC ++G + +
Sbjct: 525 HYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVP-ASVWGAVLGACRIHKNMQVGEIAGER 583
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL-----ITW------ 364
+ + +G V L +MY G E+A V+ M K + +W
Sbjct: 584 ILEIEPHNSG------VYIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVNGS 637
Query: 365 -NTIISGLAMH---GRGAGALSLFH 385
+ +SG + H R G L L H
Sbjct: 638 GHVFLSGDSSHPQFSRVCGVLGLLH 662
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 13/225 (5%)
Query: 15 TKHL-HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL QI QV +G ++ ++T A+ A +F + + +SWN++
Sbjct: 401 TLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIIC 460
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE-ELHCLVLKNGFR 132
G A N + +F +M+ +D PN TF VL +C + +G+ + K
Sbjct: 461 GLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLE 520
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV----VVWTSM-----INGYISCGDIV 183
I T +++L I+ A +M+ V VW ++ I+ + G+I
Sbjct: 521 PTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVGEIA 580
Query: 184 SARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
R L E+ P + + + Y+ +A +++ +M +K V
Sbjct: 581 GERIL-EIEPHNSGV-YIILAEMYLSSGKREDAERVWVRMREKGV 623
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 289/520 (55%), Gaps = 14/520 (2%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y+ +I + + AR +FD++ +++ SWNAM +GY Q+ + + L ++ +
Sbjct: 186 YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM 245
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D++ T +L +C + G +H +K+G + +FV LI+LY+ +++
Sbjct: 246 DSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDC 301
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE-RDVILWNTIVSGY 207
KVF M R+++ W S+I Y + A LF+ + P+ +I +I+S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 208 IDVR--NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
++R ++ L +D+ N ++ YA G V+ + +F +P ++V SWN +
Sbjct: 362 GEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTI 421
Query: 266 IGGYANNGLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
I GYA NG E ++ + M EG + N T V+VL AC++ GAL +H N
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 481
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G +V VG +L DMY KCG +++A+ +F + + + WNT+I+ HG G A+ LF
Sbjct: 482 GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 541
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
EM + G PD ITF+ +L AC+H GLV+EG F+ M DY I P ++HYGCMVDL R
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGR 601
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AG+L A++F+K MP++ DA IW LL +CRV+ NV+L ++A E L E+EP++ V+L
Sbjct: 602 AGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 661
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
SN+Y G+W+ V I+ G +K PG SS+EV+ V
Sbjct: 662 SNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKV 701
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 256/503 (50%), Gaps = 20/503 (3%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L++ K LH ++V S ++ I+ +++ L + AR FD I +++V +WN M
Sbjct: 67 LQSAKCLH---ARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLM 123
Query: 72 FNGYAQNEFHRTVVVLFTQ-MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+GY + + V+ F+ M P+ TFP VLK+C + +G ++HCL LK G
Sbjct: 124 ISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFG 180
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +++V +LI LY A+ A +F EM R++ W +MI+GY G+ A L +
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD 240
Query: 191 LAPERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
D + +++S + + I + + + + +S N ++ YA G ++
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS-NKLIDLYAEFGSLK 299
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+C+++F+ M R++ SWN +I Y N + F+ M R+ P+ T++++ S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLS-RIQPDCLTLISLASIL 358
Query: 306 ARLGALDFSKWVHVYAEYNG-YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
++LG + + V + G + ++ +GNA++ MYAK G++++A VFN + KD+I+W
Sbjct: 359 SQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISW 418
Query: 365 NTIISGLAMHGRGAGALSLFHEM-KNAGEMP-DGITFIGILCACTHMGLVEEGLSYFQSM 422
NTIISG A +G + A+ +++ M + GE+ + T++ +L AC+ G + +G+
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMK-LHGR 477
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+ + + + D+ + GRL +A+ ++P ++V W L+ + + E
Sbjct: 478 LLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEK 536
Query: 483 AELAL-ERLTELEPKNPANFVML 504
A + E L E + FV L
Sbjct: 537 AVMLFKEMLDEGVKPDHITFVTL 559
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +++ +GL ++ + + ++ A +F +I N V WN + + +
Sbjct: 473 KLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHG 532
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
V+LF +M P+ TF +L +C + EGE ++ + G ++
Sbjct: 533 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHY 592
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELA 192
+++LY +E A M + + +W ++ ++G + G I S LFE+
Sbjct: 593 GCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEH-LFEVE 651
Query: 193 PER---DVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTM 234
PE V+L N S G ++R++ + L + W++M
Sbjct: 652 PEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGL------RKTPGWSSM 695
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 278/490 (56%), Gaps = 46/490 (9%)
Query: 91 MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKA 150
++KL+ +F L+SC ++ L+ +H +++ ++F + LI +
Sbjct: 9 LRKLELKNPKLSF---LESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNL 62
Query: 151 IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAPER--------- 195
++ A +VF ++ N+ ++ S I G+ D + + L P+
Sbjct: 63 LDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKA 122
Query: 196 ------------------------DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW 231
DV + N++V+ Y + ++ A +F ++ DV+SW
Sbjct: 123 CTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSW 182
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
+M++GY +GDV ++LF++MPE+N+ +W+ +I GYA N F + ++ + + +EG V
Sbjct: 183 TSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEG-V 241
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
N+ +V+V+++CA LGAL+ + H Y N N+ +G AL+DMYA+CG I+ A+
Sbjct: 242 HANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIW 301
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGL 411
VF+ + +D ++W T+I+G AMHG AL F M+ AG P ITF +L AC+H GL
Sbjct: 302 VFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGL 361
Query: 412 VEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
VE GL F+SM DY I P++EHYGCMVDLL RAG+LAEA FV MP++ +A IW LL
Sbjct: 362 VERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
G+CR++KN E+AE A + L EL+P++ +V+LSNIY +W++V I+ M++ G K
Sbjct: 422 GACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVK 481
Query: 532 LPGCSSIEVN 541
PG + E++
Sbjct: 482 PPGYTLFEMD 491
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 186/410 (45%), Gaps = 50/410 (12%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E T HL I ++ + + +I+ + YA ++F +I + N+ +N
Sbjct: 23 ESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYN 82
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
+ G++ ++ + Q K+ +P+ T+P ++K+C + +L G + H ++++
Sbjct: 83 SFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRH 142
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++++V +L+ +YST I++A VF + +VV WTSM+ GYI GD+ SAR LF
Sbjct: 143 GFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLF 202
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG------------ 237
+ PE++++ W+ ++SGY +A +L+ + + V + T++
Sbjct: 203 DKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALE 262
Query: 238 ---------------------------YANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
YA G +++ +F+++P R+ SW LI G+A
Sbjct: 263 LGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFA 322
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNG 325
+G + L+ F RM G + P + T VLSAC+ G ++ F Y
Sbjct: 323 MHGYAEKALEYFSRMEKAG-LTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPR 381
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ C ++D+ + G + A N M K + W ++ +H
Sbjct: 382 LEHYGC----MVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIH 427
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 263/444 (59%), Gaps = 30/444 (6%)
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI--SCGDIV 183
+ N N+F+ TA+I Y++ +AA+ ++ M R + + I ++ SC D++
Sbjct: 98 IFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVL 157
Query: 184 SA-----------RCLFELAPERDVILWNTIVSGYIDVRNMI-EARKLFDQMPKKDVISW 231
+ + F P ++ IV Y + I AR++FD+M ++ V+SW
Sbjct: 158 GSNATKMVHTQVLKSGFGGYP----VVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSW 213
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML----- 286
M+SGYA G+ + LFE MPER+V +WN LI G A NG F E + FKRM+
Sbjct: 214 TAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALE 273
Query: 287 ---TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG-NVCVGNALIDMYAK 342
+ PN T+ + LSAC G L KW+H Y + Y G + + NAL+DMY K
Sbjct: 274 GNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYV-FKTYPGQDSFISNALLDMYGK 332
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFI 400
CG ++ A VF+ + K+L +WN++I+ LA+HG A+ LF E+ + G+ P+ +TF+
Sbjct: 333 CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV 392
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPI 460
G+L ACTH GLVE+G SYF+ M DY I PQIEH+GC++DLL RAGR EA++ V+ M I
Sbjct: 393 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 452
Query: 461 EADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARI 520
E D V+W +LL +C+++ +LAE ++++L E++PKN +ML+NIY + G+W +V ++
Sbjct: 453 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV 512
Query: 521 KVAMRDTGFKKLPGCSSIEVNEVV 544
+ +++ K PGCS IEV+ V
Sbjct: 513 RRLLKEKNAYKTPGCSWIEVDNQV 536
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 198/422 (46%), Gaps = 56/422 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITAC-AQLKQMTYARKMFDKITDQNVVSW 68
E+ HL Q+Q +++ G ++ + +++ C L + YAR +FD +T NV +
Sbjct: 51 EKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLY 110
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVL 127
AM YA + +L+ M + A+ PN F +P VL+SC + + +H VL
Sbjct: 111 TAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVL 170
Query: 128 KNGFRANIFVGTALIELYSTGKA-IEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
K+GF V TA+++ YS + I +A ++F EM ER VV WT+MI+GY G+ SA
Sbjct: 171 KSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNFDSAI 230
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM----------------------- 223
LFE PERDV WN +++G EA LF +M
Sbjct: 231 ELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGS 290
Query: 224 -------------------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERN 258
P +D N +L Y G+++ +R+F+ + +N
Sbjct: 291 ALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKN 350
Query: 259 VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALD--FSK 315
+ SWN LI A +G +D F ++ G V PN+ T V VL+AC G ++ +S
Sbjct: 351 LTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSY 410
Query: 316 WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
+ + +Y+ + + LID+ + G E A++V M+ + D + W ++++ +H
Sbjct: 411 FEMMRRDYD-IEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIH 469
Query: 375 GR 376
GR
Sbjct: 470 GR 471
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 137/363 (37%), Gaps = 82/363 (22%)
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
D+ + +F+ + NVF + +I YA+ ++ M+ G + PN+ V
Sbjct: 90 ADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHV 149
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDM---------------------- 339
L +C + + +K VH +G+ G V A++D
Sbjct: 150 LRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERT 209
Query: 340 ----------YAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM-- 387
YA+ G ++A+++F SM +D+ WN +I+G A +G A+ LF M
Sbjct: 210 VVSWTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVL 269
Query: 388 -------KNAGEMPDGITFIGILCACTHMGLVE-------------EGLSYFQSMAM--- 424
+ P+ T L AC H G++ G F S A+
Sbjct: 270 LALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDM 329
Query: 425 --------------DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM-----PIEADAV 465
D + + + +++ LA G A+D + ++ + V
Sbjct: 330 YGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEV 389
Query: 466 IWANLLGSCR----VYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
+ +L +C V K E+ + R ++EP+ +F L ++ G GR+++ +
Sbjct: 390 TFVGVLNACTHGGLVEKGYSYFEM-MRRDYDIEPQ-IEHFGCLIDLLGRAGRFEEAMEVV 447
Query: 522 VAM 524
M
Sbjct: 448 RGM 450
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 298/531 (56%), Gaps = 8/531 (1%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I V+ S + ++ +I A+ +M A +F + D + +SWN+M +G+ QN
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 399
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
+ + + +M+ P+ ++ + + G ++H +KNG +++ VG +
Sbjct: 400 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNS 459
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERD 196
L+++Y+ +++ +F +M +++VV WT++I G+ G A LF + D
Sbjct: 460 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 519
Query: 197 VILWNTIV---SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
V++ ++I+ SG + ++ E + D++ N ++ Y G+V+ R+FE
Sbjct: 520 VMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFEL 579
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDF 313
+ ++V SW +I Y +NGL E L+ F ++ E V P+ ++V++LSA A L AL
Sbjct: 580 IEFKDVVSWTSMISCYVHNGLANEALELF-HLMKETGVEPDSISLVSILSAAASLSALKK 638
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K +H + G+ + + L+DMYA+CG +E + +VFN + KDL+ W ++I+ M
Sbjct: 639 GKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGM 698
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG G A+ LF M++ PD I F+ +L AC+H GL+ EG + +SM +Y + P E
Sbjct: 699 HGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPE 758
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
HY C+VDLL RA L EA FVK M +E A +W LLG+C+++ N EL E+A ++L E+
Sbjct: 759 HYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEM 818
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+P+NP N+V++SN+Y RWKDV +++ M+ +G KK PGCS IEV V
Sbjct: 819 DPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKV 869
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 239/494 (48%), Gaps = 26/494 (5%)
Query: 19 HQIQTQVVTS-GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
Q+ ++TS L S +++ R++ + + A K+FD + + + +WNAM Y
Sbjct: 134 QQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVT 193
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N + L+ +M+ + TFP +LK+C + R G E+H L +K G+ + +FV
Sbjct: 194 NGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFV 253
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSMINGYISCGDIVSARCLF------E 190
+++ +Y+ + A ++F M E+ +VV W SMI+ Y S G + A LF
Sbjct: 254 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS 313
Query: 191 LAPERDVI---LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LAP L S +I I A L +V N +++ YA G + E
Sbjct: 314 LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY-YINVFVANALIAMYARFGKMGEA 372
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+F M + + SWN ++ G+ NGL+ E L + M G+ P+ ++++++A AR
Sbjct: 373 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK-PDLVAVISIIAASAR 431
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
G +H YA NG ++ VGN+L+DMYAK ++ +F+ M KD+++W TI
Sbjct: 432 SGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTI 491
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G A +G + AL LF E++ G D + IL AC+ + L+ + S +
Sbjct: 492 IAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLI-SSVKEIHSYIIRKG 550
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRM--PIE-ADAVIWANLLGSCRVYK---NVE 481
+ + G +VD+ G VD+ RM IE D V W +++ SC V+ N
Sbjct: 551 LSDLVLQNG-IVDVYGECGN----VDYAARMFELIEFKDVVSWTSMI-SCYVHNGLANEA 604
Query: 482 LAELALERLTELEP 495
L L + T +EP
Sbjct: 605 LELFHLMKETGVEP 618
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 240/519 (46%), Gaps = 84/519 (16%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITD-QNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK 93
++ I+ + + AR++FD++ + ++VVSWN+M + Y+ N + LF +M+K
Sbjct: 252 FVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK 311
Query: 94 LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST-GKAIE 152
PN +TF L++C + +++G +H VLK+ + N+FV ALI +Y+ GK E
Sbjct: 312 ASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGE 371
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCG-------------------DIV--------SA 185
AA +F MD+ + + W SM++G++ G D+V SA
Sbjct: 372 AA-NIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 430
Query: 186 RCLFEL------------APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
R L + D+ + N++V Y +M +FD+MP KDV+SW T
Sbjct: 431 RSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 490
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+++G+A NG LF E+ G+ +V+
Sbjct: 491 IIAGHAQNGSHSRALELFREVQLE---------------GIDLDVM-------------- 521
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
I ++L AC+ L + K +H Y G ++ + N ++D+Y +CG ++ A +F
Sbjct: 522 ---MISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMF 577
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
++ KD+++W ++IS +G AL LFH MK G PD I+ + IL A + ++
Sbjct: 578 ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALK 637
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA---VDFVKRMPIEADAVIWANL 470
+G + V + +VD+ AR G L ++ +F++ D V+W ++
Sbjct: 638 KG-KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN----KDLVLWTSM 692
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG 509
+ + ++ A + L R E E P + ++ +Y
Sbjct: 693 INAYGMH-GCGRAAIDLFRRMEDESIAPDHIAFVAVLYA 730
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 191/440 (43%), Gaps = 84/440 (19%)
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFT----FPIVLKSCVKINALREGEELHC-LVLKNGFR 132
NE +++ LF P+ F+ + VL+ C AL EG+++H ++ N
Sbjct: 93 NEAFQSLTDLFANQS-----PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALF 147
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS-------------- 178
++F+ T L+ +Y + A K+F M + + W +MI Y++
Sbjct: 148 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 207
Query: 179 ------------------CGDIVSARCLFE---LAPERD----VILWNTIVSGYIDVRNM 213
CG + RC E LA + V + N+IV Y ++
Sbjct: 208 RVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDL 267
Query: 214 IEARKLFDQMP-KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
AR+LFD+MP K+DV+SWN+M+S Y++NG E RLF EM
Sbjct: 268 NGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM------------------ 309
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
+ + PN T V L AC + ++H + Y NV V
Sbjct: 310 --------------QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NALI MYA+ G + A ++F +MD D I+WN+++SG +G AL +HEM++AG+
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
PD + I I+ A G G+ + AM + ++ +VD+ A+ +
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQ-IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 474
Query: 453 DFVKRMPIEADAVIWANLLG 472
+MP + D V W ++
Sbjct: 475 CIFDKMP-DKDVVSWTTIIA 493
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I ++ G + ++ A+ + +R +F+ I ++++V W +M N Y +
Sbjct: 641 EIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHG 700
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-LHCLVLKNGFRANIFVG 138
R + LF +M+ P+ F VL +C + EG L + +
Sbjct: 701 CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHY 760
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELA 192
L++L +E AY+ M+ E VW ++ I+ G+I +A+ L E+
Sbjct: 761 VCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI-AAQKLLEMD 819
Query: 193 PE 194
PE
Sbjct: 820 PE 821
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 303/550 (55%), Gaps = 16/550 (2%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T A S LE H I ++ L K+ ++ ++ A+ + AR++F+++ D+
Sbjct: 436 STCAASHDLEMGSQFHSI---IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ V+WN + Y Q+E LF +M + + LK+C ++ L +G+++H
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
CL +K G ++ G++LI++YS I+ A KVF + E +VV ++I GY S ++
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLE 611
Query: 184 SARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TM 234
A LF+ R V I + TIV ++ + Q+ K+ S ++
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 235 LSGYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
L Y N+ + E LF E+ +++ W G++ G++ NG + E L +K M +G V P
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG-VLP 730
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ AT VTVL C+ L +L + +H + + + N LIDMYAKCG ++ + VF
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 354 NSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
+ M + ++++WN++I+G A +G AL +F M+ + MPD ITF+G+L AC+H G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+G F+ M Y I +++H CMVDLL R G L EA DF++ ++ DA +W++LLG
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CR++ + E++ E+L ELEP+N + +V+LSNIY G W+ ++ MRD G KK+
Sbjct: 911 ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 533 PGCSSIEVNE 542
PG S I+V +
Sbjct: 971 PGYSWIDVEQ 980
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 222/457 (48%), Gaps = 39/457 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ ++ + G++ + I+ A+ Q++YA K FD +++V +WN+M + Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGK 140
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V+ F + + PN FTF IVL +C + + G ++HC ++K G N + G A
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----D 196
L+++Y+ I A +VF + + N V WT + +GY+ G A +FE + D
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ + T+++ YI + + +AR LF +M DV++WN M+SG+ G C+ + E
Sbjct: 261 HLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG----CETVAIE--- 313
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
FF + + V +T+ +VLSA + LD
Sbjct: 314 -----------------YFFN--------MRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH A G N+ VG++L+ MY+KC +E A VF +++ K+ + WN +I G A +G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
+ LF +MK++G D TF +L C +E G S F S+ + + +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGN 467
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+VD+ A+ G L +A +RM + D V W ++GS
Sbjct: 468 ALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 229/467 (49%), Gaps = 25/467 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + + GL + Y+ +++ ++ ++M A K+F+ + ++N V WNAM GYA N
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V+ LF MK + FTF +L +C + L G + H +++K N+FVG A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERD 196
L+++Y+ A+E A ++F M +R+ V W ++I Y+ + A LF+ D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFE 252
+ + V + + +++ K +D+ + ++++ Y+ G +++ +++F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+PE +V S N LI GY+ N L E + F+ MLT G V P++ T T++ AC + +L
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLT 646
Query: 313 FSKWVHVYAEYNGYQG-NVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISG 370
H G+ +G +L+ MY + A +F+ + + K ++ W ++SG
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ +G AL + EM++ G +PD TF+ +L C+ + + EG + +S++
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-------HSLIF 759
Query: 431 QIEH------YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ H ++D+ A+ G + + M ++ V W +L+
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 189/375 (50%), Gaps = 10/375 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I +L ++ AR +F +++ +VV+WN M +G+ + + F M+K
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL + + L G +H +K G +NI+VG++L+ +YS + +EAA KVF
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIE 215
++E+N V W +MI GY G+ LF D + +++S ++
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ + K K++ N ++ YA G +E+ +++FE M +R+ +WN +IG Y
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ E D FKRM G + + A + + L AC + L K VH + G ++
Sbjct: 507 DENESEAFDLFKRMNLCG-IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
G++LIDMY+KCGII++A VF+S+ +++ N +I+G + + A+ LF EM G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG 624
Query: 392 EMPDGITFIGILCAC 406
P ITF I+ AC
Sbjct: 625 VNPSEITFATIVEAC 639
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 194/449 (43%), Gaps = 47/449 (10%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI ++ GLE++ Y ++ A+ +++ AR++F+ I D N V W +F+GY +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V++F +M+ P+ F V+ + +++ L++ L+ ++
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR----LLFGEMSSPDVVAWN 296
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC---------GDIVSARCLFE 190
+I + A + F M + +V S + +S G +V A + +
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI-K 355
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
L ++ + +++VS Y M A K+F+ + +K+ + WN M+ GYA+NG+ + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F +M GY +D T ++LS CA
Sbjct: 416 FMDMKS----------SGYN----------------------IDDFTFTSLLSTCAASHD 443
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ H N+ VGNAL+DMYAKCG +E+A +F M +D +TWNTII
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ A LF M G + DG L ACTH+ + +G +++ +
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDR 562
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ ++D+ ++ G + +A +P
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 32/297 (10%)
Query: 212 NMIEARKLFDQMPKKDVISW----------------------NTMLSGYANNGDVEECKR 249
+ ++RK+FD+MP++ ++ N ++ YA V ++
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
F+ + E++V +WN ++ Y++ G +VL +F + E ++FPN T VLS CAR
Sbjct: 117 QFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF-ENQIFPNKFTFSIVLSTCARET 174
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
++F + +H G + N G AL+DMYAKC I +A VF + + + W + S
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G G A+ +F M++ G PD + F+ ++ +G +++ F M+
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----S 289
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDF---VKRMPIEADAVIWANLLGSCRVYKNVELA 483
P + + M+ + G A+++ +++ +++ ++L + + N++L
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 285/542 (52%), Gaps = 78/542 (14%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLK---QMTYARKMFDKITDQNVVSWNAMFNG 74
L QI Q++ + L + R+I C+ + YA +F +I N + A+ G
Sbjct: 22 LRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKG 81
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
++ ++L+ +M L CL +G
Sbjct: 82 FSDTSNPVESLILYARM------------------------------LSCLNYSSGVE-- 109
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+S ++A K+ + R V G ++ F
Sbjct: 110 ----------FSIPSVLKACGKLLAFDEGRQVH------------GQVLKTHLWF----- 142
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
D + N++V YID + AR++FD+MP +DV+SWN+M++GY G++E LF+EM
Sbjct: 143 -DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEM 201
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
PER++ S N +I GY K ML+ G + P+ IV+VLSA A LG ++
Sbjct: 202 PERDLVSCNAMIDGYG------------KEMLSLG-LRPDGPAIVSVLSAIADLGFVEEG 248
Query: 315 KWVHVYAEYNGYQ-GNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLA 372
KW+H Y N + + +G+ALIDMY+KCG IENA VF S+ +++ WN++ISGLA
Sbjct: 249 KWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLA 308
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG AL +F EM+ P+ ITF+G+L C+H GLVEEG YF+SM Y IVP+I
Sbjct: 309 IHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRI 368
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HYGCM+DL RAGRL +A+ ++ MP EAD + W +L + + ++E+ + A R E
Sbjct: 369 QHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIE 428
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRE 552
L P + +++V+LSNIY GRW DVA+I++ MR G KK+ GCSS+ VN V L +E
Sbjct: 429 LAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLGKE 488
Query: 553 LD 554
LD
Sbjct: 489 LD 490
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 207/318 (65%), Gaps = 1/318 (0%)
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
D ++NT+++ YA G V + + LF+EMP RN SW+ ++ GY G E L F RM
Sbjct: 276 DASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQ 335
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
+G V P+D +V VL+ACA+LG L+ KWVH Y + N + V +G AL+DMYAKCG +
Sbjct: 336 ADG-VRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEM 394
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCAC 406
+ A++VF M K+++ W T+I GLAMHGRG+ AL LF +M+ G PD I FIG LCAC
Sbjct: 395 QLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCAC 454
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
TH GLV++G F SM Y I P+IEHYGCMVDLLAR G L EA + V++MP++ DA+I
Sbjct: 455 THTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALI 514
Query: 467 WANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRD 526
W L+ CR +KNVELAE ++ ELEP +V+L NIY GR I+ MR+
Sbjct: 515 WGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMRE 574
Query: 527 TGFKKLPGCSSIEVNEVV 544
G K PGCS++E+ V+
Sbjct: 575 KGVDKTPGCSTVEIKGVI 592
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 10/239 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+ITA A+ ++T AR +FD++ +N VSW+AM NGY Q R + LF +M+ P+
Sbjct: 283 LITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPD 342
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
VL +C ++ L +G+ +H + N R +F+GTAL+++Y+ ++ A +VF
Sbjct: 343 DTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFK 402
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLF----ELAPERDVILWNTIVSGYIDVRNMIE 215
M E+NV+ WT+MI G G A LF L + D I + + + +
Sbjct: 403 VMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDK 462
Query: 216 ARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSWNGLIGG 268
R+LFD M +K + + M+ A NG + E + + E+MP + + W L+ G
Sbjct: 463 GRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAG 521
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 143/357 (40%), Gaps = 57/357 (15%)
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL----HC 124
NA+ A + + L+ + + P T P +LKS A+ L H
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALAVHA 234
Query: 125 LVLKNGFRANIFVGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI 182
+K G + V ALI +++ G+ + A + + + ++I Y G +
Sbjct: 235 HAVKLGLAGFLLVSNALIRVHAGILGR-LSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 183 VSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----- 237
AR LF+ P R+ + W+ +V+GY+ + EA LF +M V +T+L G
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 238 ----------------------------------YANNGDVEECKRLFEEMPERNVFSWN 263
YA G+++ +F+ M E+NV +W
Sbjct: 354 AQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWT 413
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVH 318
+I G A +G E L+ F +M G V P+D + L AC G +D F V
Sbjct: 414 TMIKGLAMHGRGSEALELFSQMERLG-VKPDDIAFIGALCACTHTGLVDKGRELFDSMVR 472
Query: 319 VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMH 374
Y G + + ++D+ A+ G++ A ++ M K D + W +++G H
Sbjct: 473 KY----GIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 42/268 (15%)
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR----LGALDFSKWVH 318
N LI A + L + +L G P T+ ++L + A GA + VH
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGH-HPTPHTLPSLLKSLALSPAVPGARGLALAVH 233
Query: 319 VYAEYNGYQGNVCVGNALIDMYAK-CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR- 376
+A G G + V NALI ++A G + +A+ + + + D T+NT+I+ A GR
Sbjct: 234 AHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGRV 293
Query: 377 ------------------------------GAGALSLFHEMKNAGEMPDGITFIGILCAC 406
G AL LF M+ G PD +G+L AC
Sbjct: 294 TDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAAC 353
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+G++E+G + +I + +VD+ A+ G + A++ K M E + +
Sbjct: 354 AQLGVLEQG-KWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK-EKNVLA 411
Query: 467 WANLLGSCRVYKNVELAELALERLTELE 494
W ++ ++ ALE +++E
Sbjct: 412 WTTMIKGLAMHGR---GSEALELFSQME 436
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ A+ +M A ++F + ++NV++W M G A + + LF+QM++L
Sbjct: 379 FLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERL 438
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEEL-HCLVLKNGFRANIFVGTALIELYSTGKAIEA 153
P+ F L +C + +G EL +V K G + I +++L + +
Sbjct: 439 GVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNE 498
Query: 154 AYKVFGEMDER-NVVVWTSMING 175
A ++ +M + + ++W +++ G
Sbjct: 499 AREMVEKMPMKPDALIWGALMAG 521
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 291/561 (51%), Gaps = 74/561 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ + ++ G + + YI ++ + ++ A+++FD++ +NVV+WN++ +GY
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVG 159
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M K+ P F+ VL C ++ + G ++H L +K GF NI VGT
Sbjct: 160 CPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGT 219
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
LI+LYS G I+A +R +F+L PER++I
Sbjct: 220 CLIDLYSKGWNIDA-------------------------------SRLMFDLMPERNIIT 248
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGDVEECK----RLF 251
W ++V+GY + + A L M + + +++N +LS ++++ D++ CK R+
Sbjct: 249 WTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRII 308
Query: 252 EEMPERNVF---------------------------------SWNGLIGGYANNGLFFEV 278
E E N + SWN +IGG +N G
Sbjct: 309 REGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAA 368
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L F +M G + + T +VL A + LD K +H GY N+ V N L+
Sbjct: 369 LKCFSKMRQAG-IDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVS 427
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MYA+CG I +A VF+ MD D+I+WN+++SG A HG G A+ LF +M+ +G PD T
Sbjct: 428 MYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTT 487
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSI-VPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
F+ +L AC H+GL+++GL YF M DYS+ P EHY MVDL +RAG L+EA DF+
Sbjct: 488 FLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINT 547
Query: 458 MPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDV 517
MPIE ++ LL +C+V+ NVE+A ++L ++ P +P +V+LSN+ +G W +V
Sbjct: 548 MPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNV 607
Query: 518 ARIKVAMRDTGFKKLPGCSSI 538
A I+ M D G +K PG S I
Sbjct: 608 ASIRKVMCDRGVRKEPGYSWI 628
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P + ++S+CA+ G++ +H G+ NV + +AL+DMY KCG + +A +
Sbjct: 77 PTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRL 136
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F+ M ++++TWN++ISG G A+ LF EM G P + +L C M
Sbjct: 137 FDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDT 196
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ G+ ++M I C++DL ++ + + MP E + + W +++
Sbjct: 197 KLGIQ-VHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMP-ERNIITWTSMVA 254
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 214/343 (62%)
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+++ Y + AR +FDQ KD+ WN M+SGY +G++ + LF+ MP RNV S
Sbjct: 109 SLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSGNLACARELFDVMPARNVVS 168
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
W +IG YA E ++ F+RM E + P+ +++VLSAC LGA+D +WVH +
Sbjct: 169 WTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFV 228
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G + + NA+IDMY K G + AV+VF MD K ++TW T+I+G A+HG G A+
Sbjct: 229 VRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAI 288
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
+F M+ P+ +TF+ IL AC+H+GL + G YF+ M Y I ++EHYGCMVDL
Sbjct: 289 EMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDL 348
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
L RAG L EA D V+ MP +A+A IW LL + R + + EL + AL L ELEP N N+
Sbjct: 349 LGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNY 408
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
++LSNIY + RW DV++++ M+D G + +PG SSIEV+ +V
Sbjct: 409 ILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSIEVDGMV 451
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 52/335 (15%)
Query: 107 LKSCVKINALRE--GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
L + KI LR G +LH ++++ G ++ V +LI+ Y + + +A VF + ++
Sbjct: 74 LNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDK 133
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
++ W MI+GY+ G++ AR LF++ P R+V+ W T++ Y ++ +EA ++F +M
Sbjct: 134 DIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQ 193
Query: 225 KK-----------------------DVISW-----------------NTMLSGYANNGDV 244
+ D+ W N ++ Y G V
Sbjct: 194 VEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCV 253
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ +FE M +++V +W +I G+A +GL E ++ F+RM E V PND T + +LSA
Sbjct: 254 RKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMEN-VAPNDVTFLAILSA 312
Query: 305 CARLGALDFSKWVH--VYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DL 361
C+ +G D +W + ++Y Q G ++D+ + G + A D+ M K +
Sbjct: 313 CSHVGLTDLGRWYFKIMVSQYRIKQRVEHYG-CMVDLLGRAGYLMEAQDLVQDMPFKANA 371
Query: 362 ITWNTIISGLAMHGRGA-GALSLFH----EMKNAG 391
W +++ HG G +L H E N+G
Sbjct: 372 AIWGALLAAARTHGDAELGKQALLHLIELEPHNSG 406
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 46/298 (15%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY---- 75
Q+ + +V +GL +++ +I ++ AR +FD+ TD+++ WN M +GY
Sbjct: 90 QLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSG 149
Query: 76 -------------AQNEFHRTVVV-LFTQMKK-LDAM-------------PNCFTFPIVL 107
A+N T V+ + QMK+ ++A+ P+ VL
Sbjct: 150 NLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVL 209
Query: 108 KSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV 167
+C + A+ GE +H V++ G I + A+I++Y + A +VF MD+++VV
Sbjct: 210 SACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVV 269
Query: 168 VWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEARKLFD 221
WT++I G+ G + A +F +AP L ++ + ++ R F
Sbjct: 270 TWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDL--GRWYFK 327
Query: 222 QMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNG 273
M K+ V + M+ G + E + L ++MP + N W L+ +G
Sbjct: 328 IMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHG 385
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
G + V +LI Y CG + +A VF+ KD+ WN +ISG G A A LF
Sbjct: 99 GLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSGNLACARELF 158
Query: 385 H------------------EMKNAGEM--------------PDGITFIGILCACTHMGLV 412
+MK E PDG+ + +L AC +G V
Sbjct: 159 DVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVLSACGDLGAV 218
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ G + + + QI ++D+ + G + +AV+ + M + V W ++
Sbjct: 219 DLG-EWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMD-QKSVVTWTTVIA 276
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYG-------DLGRW 514
++ + L + + R E+E P + L+ + DLGRW
Sbjct: 277 GFALH-GLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRW 324
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 290/550 (52%), Gaps = 46/550 (8%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R+I + AR++FD I + + + + + + + +++ +++ P
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 162
Query: 99 NCFTFPIVLKSC-VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
+ F K+C V +ALR +E+H + G +++FVG ALI Y K +E A +V
Sbjct: 163 DMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 221
Query: 158 FGEMDERNVVVWTSMINGYISCG-----------------------------------DI 182
F ++ R+VV WTS+ + Y+ CG D+
Sbjct: 222 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281
Query: 183 VSARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
S + + A ++ + + +VS Y ++ EAR +FD MP +DV+SWN +L+ Y
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341
Query: 239 ANNGDVEECKRLFEEMPERNV----FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
N + E+ LF +M V +WN +IGG NG E ++ F++M G PN
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG-FKPN 400
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ TI ++L AC+ L K +H Y + G++ AL+ MYAKCG + + +VF+
Sbjct: 401 EITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFD 460
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M KD++ WNT+I AMHG G AL LF +M + P+ +TF G+L C+H LVEE
Sbjct: 461 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEE 520
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G+ F SM D+ + P HY C+VD+ +RAGRL EA F++ MP+E A W LL +C
Sbjct: 521 GVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC 580
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
RVYKNVELA+++ ++L E+EP NP N+V L NI W + +++++ M++ G K PG
Sbjct: 581 RVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPG 640
Query: 535 CSSIEVNEVV 544
CS ++V V
Sbjct: 641 CSWLQVGNKV 650
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L+ K +I V G+ + ++ +++ A+ + AR +FD + ++VVSWN
Sbjct: 277 ELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNG 336
Query: 71 MFNGYAQNEFHRT-----------------------------------VVVLFTQMKKLD 95
+ Y +N+ + V +F +M+K+
Sbjct: 337 VLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG 396
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
PN T +L +C LR G+E+HC V ++ ++ TAL+ +Y+ + +
Sbjct: 397 FKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSR 456
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVR 211
VF M ++VV W +MI G+ A LF+ + + + + ++SG R
Sbjct: 457 NVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSR 516
Query: 212 NMIEARKLF-----DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
+ E ++F D + + D ++ ++ Y+ G + E + + MP E +W L
Sbjct: 517 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 576
Query: 266 IGG 268
+
Sbjct: 577 LAA 579
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 281/524 (53%), Gaps = 9/524 (1%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G ++ +I A + + AR +FD I +++VSW M YA+N F+ + LF
Sbjct: 166 GHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLF 225
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
QM+ + PN FT LKSC+ + A G+ +H LK + ++FVG AL+ELY+
Sbjct: 226 NQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKS 285
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYI 208
I A ++F EM + +++ W+ MI Y A LF + V+ N + +
Sbjct: 286 GEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVL 345
Query: 209 DVRNMIEARKLFDQMPK--------KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
+ L Q+ +V N ++ YA G++E +LFEE+P+RN
Sbjct: 346 QACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV 405
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
+WN +I GY G ++ F ML E + P + T +VL A A L AL+ +H
Sbjct: 406 TWNTIIVGYVQLGDGERAMNLFTHML-EHDMQPTEVTYSSVLRASASLAALEPGLQIHSL 464
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
Y + V N+LIDMYAKCG I +A F+ M+ +D ++WN +I G +MHG A
Sbjct: 465 TIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEA 524
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L+LF M++ P+ +TF+G+L AC++ GL+ +G ++F+SM+ DY I P IEHY CMV
Sbjct: 525 LNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVW 584
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL R GR EA+ + + + ++W LLG+C ++K V+L + + + E+EP + A
Sbjct: 585 LLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDAT 644
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
V+LSN+Y GRW +VA ++ M+ +K PG S +E VV
Sbjct: 645 HVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVV 688
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 159/392 (40%), Gaps = 73/392 (18%)
Query: 119 GEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYIS 178
G+ LHC +LK G ++F L+ Y +++ A K+F EM + N + + ++ GY
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 179 CGDIVSA---------------------------------------RCLFELAPERDVIL 199
A C+++L D +
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
++ Y N+ AR +FD + KD++SW M++ YA N EE +LF +M
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR---- 229
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
I GY PN+ TI L +C L A + K VH
Sbjct: 230 ------IMGYK----------------------PNNFTISGALKSCLGLEAFNVGKSVHG 261
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
A Y ++ VG AL+++YAK G I +A +F M DLI W+ +I+ A R
Sbjct: 262 CALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKE 321
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
AL LF M+ +P+ TF +L AC ++ G S + + + + ++
Sbjct: 322 ALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG-KQIHSCVLKFGLNSNVFVSNAIM 380
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
D+ A+ G + ++ + +P D V W ++
Sbjct: 381 DVYAKCGEIENSMKLFEELPDRND-VTWNTII 411
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 10/259 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI + V+ GL + +++ I+ A+ ++ + K+F+++ D+N V+WN + GY Q
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LFT M + D P T+ VL++ + AL G ++H L +K + + V
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
+LI++Y+ I A F +M++R+ V W +MI GY G + A LF++ D
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKP 538
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRL 250
+ + ++S + + + + F+ M K I + M+ G +E +L
Sbjct: 539 NKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKL 598
Query: 251 FEEMP-ERNVFSWNGLIGG 268
E+ + +V W L+G
Sbjct: 599 IGEIAYQPSVMVWRALLGA 617
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 21/336 (6%)
Query: 179 CGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTM 234
C +I +CL L + I+ D I + L + K+ D+ + N +
Sbjct: 20 CRNIHHQQCLSALDSHSYAHMLQQIIRNGADP---IAGKHLHCHILKRGTSLDLFAQNIL 76
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
L+ Y + +++ +LF+EMP+ N S+ L GY+ + F + L R+ EG N
Sbjct: 77 LNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEV-N 135
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T+L + +H G+ + VG ALID Y+ G ++ A VF+
Sbjct: 136 PFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFD 195
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
+ KD+++W +++ A + +L LF++M+ G P+ T G L +C +
Sbjct: 196 DICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNV 255
Query: 415 GLSYFQSM---AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G S D+ + I +++L A++G + +A + MP + D + W+ ++
Sbjct: 256 GKSVHGCALKGCYDHDLFVGIA----LLELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMI 310
Query: 472 GSCRVYKNVELAELALERLTELEPKN--PANFVMLS 505
Y + ++ AL+ + + P NF S
Sbjct: 311 AR---YAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 285/525 (54%), Gaps = 10/525 (1%)
Query: 29 GLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
G + + ++ +I ++ AR +FD + +++ SWNAM +G QN + +
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTG 148
+M+ N T +L C ++ + +H V+K+G ++FV ALI +Y+
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 149 KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP----ERDVILWNTIV 204
+E A K F +M +VV W S+I Y D V+A F + D++ ++
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 205 SGYIDVRNMIEARKLFDQMPKK-----DVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
S R+ +R + + ++ DV+ N ++ YA G ++ ++FE + ++V
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDV 484
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SWN LI GYA NGL E ++ +K M + PN T V++L A A +GAL +H
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG 544
Query: 320 YAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAG 379
+V V LID+Y KCG + +A+ +F + + +TWN IIS +HG
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604
Query: 380 ALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMV 439
L LF EM + G PD +TF+ +L AC+H G VEEG F+ M +Y I P ++HYGCMV
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMV 663
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPA 499
DLL RAG L A F+K MP++ DA IW LLG+CR++ N+EL + A +RL E++ KN
Sbjct: 664 DLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVG 723
Query: 500 NFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+LSNIY ++G+W+ V +++ R+ G KK PG S+IEVN V
Sbjct: 724 YYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 281/575 (48%), Gaps = 33/575 (5%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S + K LH + +V +G +S +I+ R++ A L ++ +R FD+I ++V +W
Sbjct: 129 STKTPFAKCLHAL---LVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTW 185
Query: 69 NAMFNGYAQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N+M + Y N FH + + + + P+ +TFP VLK+C L +G +HC
Sbjct: 186 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAF 242
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA-R 186
K GF+ N+FV +LI +YS A +F +M R++ W +MI+G I G+ A
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302
Query: 187 CLFELAPERDVILWNTIVS--------GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
L E+ E + + T+VS G I +I + + + D+ N +++ Y
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL-EFDLFVSNALINMY 361
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G++E+ ++ F++M +V SWN +I Y N F +M G P+ T+
Sbjct: 362 AKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNG-FQPDLLTL 420
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGY-QGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
V++ S A+ S+ VH + G+ +V +GNA++DMYAK G++++A VF +
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIL 480
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACTHMGLVEEGL 416
KD+I+WNT+I+G A +G + A+ ++ M+ E +P+ T++ IL A H+G +++G+
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 540
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+ ++ + C++D+ + GRL +A+ ++P E+ +V W ++ +
Sbjct: 541 R-IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES-SVTWNAIISCHGI 598
Query: 477 YKNVELA-ELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGC 535
+ + E +L E L E + FV L + G ++ M++ G K
Sbjct: 599 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP---- 654
Query: 536 SSIEVNEVVMLGCLSRELDRKSIVRAEANMIKLLP 570
+ GC+ L R + IK +P
Sbjct: 655 ------SLKHYGCMVDLLGRAGYLEMAYGFIKDMP 683
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 107/249 (42%), Gaps = 15/249 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I +V+ + L ++ +I + ++ A +F ++ ++ V+WNA+ + + +
Sbjct: 541 RIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHG 600
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ LF +M P+ TF +L +C + EG+ L+ + G + ++
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 660
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELAP 193
+++L +E AY +M + + +W ++ I+G I G S R LFE+
Sbjct: 661 CMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR-LFEVDS 719
Query: 194 ER--DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG------YANNGDVE 245
+ +L + I + + + R L + K W+T+ Y N
Sbjct: 720 KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHP 779
Query: 246 ECKRLFEEM 254
+CK ++EE+
Sbjct: 780 KCKEIYEEL 788
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 302/575 (52%), Gaps = 26/575 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +V +G E + ++ +I + + + A +FD + ++ V+WN M GYA
Sbjct: 226 QVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIG 285
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F+ +F +M+ + F LK C + L ++LHC V+KNG+ + T
Sbjct: 286 FYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT 345
Query: 140 ALIELYSTGKAIEAAYKVFGEMDE-RNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
AL+ YS +++ A+K+F D NVV WT+MI G++ + A LF V
Sbjct: 346 ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVR 405
Query: 198 ---ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISW--------NTMLSGYANNGDVEE 246
++T+++G + L Q+ + + ++ +L Y G+V E
Sbjct: 406 PNHFTYSTVLAG--------KPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVE 457
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
R+F +P +++ +W+ ++ G A + ++ F +++ EG V PN+ T +V++AC+
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEG-VKPNEYTFSSVINACS 516
Query: 307 RLGA-LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A ++ K +H A +G +CV +AL+ MY+K G IE+A VF + +D+++WN
Sbjct: 517 SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWN 576
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
++I+G HG AL +F M+N G D +TFIG+L ACTH GLVEEG YF M D
Sbjct: 577 SMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD 636
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y I +IEHY CMVDL +RAG +A+D + MP A IW LL +CRV++N+EL +L
Sbjct: 637 YHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKL 696
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV- 544
A E+L L+P + +V+LSNI+ G W++ A ++ M + KK GCS IE+ +
Sbjct: 697 AAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIF 756
Query: 545 --MLGCLSRELDRKSIVRAEANMIKLLPQNNHPLT 577
+ G +S + E IKL P T
Sbjct: 757 SFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDT 791
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 209/463 (45%), Gaps = 19/463 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q + SG + + ++ + + R +FD++ +NVVSW ++ +GYA+N
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNG 184
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V+ L QM+ PN FTF VL + + + G ++H +++KNGF FV
Sbjct: 185 LNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCN 244
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
ALI +Y + + A VF M R+ V W MI GY + G + +F V L
Sbjct: 245 ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKL 304
Query: 200 WNTIVSGYIDV----RNMIEARKLFDQMPK------KDVISWNTMLSGYANNGDVEECKR 249
T+ + + R + ++L + K +D+ + ++ Y+ V+E +
Sbjct: 305 SRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT--ALMVTYSKCSSVDEAFK 362
Query: 250 LFEEM-PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
LF NV +W +IGG+ N + +D F +M EG V PN T TVL+ +
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREG-VRPNHFTYSTVLA--GKP 419
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
+L + Y Y+ V AL+D Y K G + + VF S+ KD++ W+ ++
Sbjct: 420 SSLLSQLHAQIIKAY--YEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAML 477
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
+GLA A+ +F ++ G P+ TF ++ AC+ E + A+
Sbjct: 478 TGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGK 537
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ ++ + ++ G + A R E D V W +++
Sbjct: 538 SNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMI 579
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 209/470 (44%), Gaps = 27/470 (5%)
Query: 52 YARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCV 111
YA ++FD+ +++ +N + +++N R + LF + + T LK C
Sbjct: 56 YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
+ G ++HC LK+GF ++ VGT+L+++Y + E +F EM +NVV WTS
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 172 MINGYISCG------DIVSARCL-------FELAPERDVILWNTIVSGYIDVRNMIEARK 218
+++GY G +++ + F A + +I+ G + V MI
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ N ++ Y + V + + +F+ M R+ +WN +IGGYA G + E
Sbjct: 236 F-----EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
F RM G V + T L C++ L+F+K +H NGY+ + AL+
Sbjct: 291 FQMFHRMRLAG-VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349
Query: 339 MYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGI 397
Y+KC ++ A +F+ D +++TW +I G + A+ LF +M G P+
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409
Query: 398 TFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKR 457
T+ +L L + + Q + Y VP + ++D + G + E+
Sbjct: 410 TYSTVLAGKPSSLLSQ---LHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYS 464
Query: 458 MPIEADAVIWANLLGSCRVYKNVELA-ELALERLTELEPKNPANFVMLSN 506
+P + D V W+ +L ++ E A E+ ++ + E N F + N
Sbjct: 465 IPAK-DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 52/357 (14%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L Q+ Q++ + EK + ++ A + + + ++F I +++V+W+AM G AQ
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQ 482
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALRE-GEELHCLVLKNGFRANIF 136
+ +F Q+ K PN +TF V+ +C A E G+++H +K+G +
Sbjct: 483 TRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALC 542
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V +AL+ +YS IE+A KVF +ER++V W SMI GY GD A +F++ +
Sbjct: 543 VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQG 602
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM-- 254
+ L D +++ +L+ + G VEE ++ F M
Sbjct: 603 LPL---------------------------DDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
Query: 255 ---PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI-VTVLSACA---- 306
++ + ++ ++ Y+ G+F + +D + G FP TI T+L+AC
Sbjct: 636 DYHIDKKIEHYSCMVDLYSRAGMFDKAMD-----IINGMPFPASPTIWRTLLAACRVHRN 690
Query: 307 -RLGALDFSKWVHVYAEYNGYQGNVCVGNALI-DMYAKCGIIENAVDVFNSMDTKDL 361
LG L K V + Q N VG L+ +++A G E V MD + +
Sbjct: 691 LELGKLAAEKLVSL-------QPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKV 740
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 36/256 (14%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSW 68
S T +H QI V SG + ++ ++T ++ + A K+F + ++++VSW
Sbjct: 516 SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSW 575
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
N+M GY Q+ + + +F M+ + TF VL +C + EGE+ +++K
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
Query: 129 N-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ I + +++LYS + A MD +ING
Sbjct: 636 DYHIDKKIEHYSCMVDLYSRAGMFDKA------MD---------IINGMP---------- 670
Query: 188 LFELAPERDVILWNTIVSGYIDVRNM----IEARKLFDQMPKKDVISWNTMLSGYANNGD 243
F +P +W T+++ RN+ + A KL P D + + + + +A G+
Sbjct: 671 -FPASP----TIWRTLLAACRVHRNLELGKLAAEKLVSLQP-NDAVGYVLLSNIHAVAGN 724
Query: 244 VEECKRLFEEMPERNV 259
EE + + M ER V
Sbjct: 725 WEEKAHVRKLMDERKV 740
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 290/530 (54%), Gaps = 53/530 (10%)
Query: 92 KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELY--STGK 149
K + A C + +L+ C ++ +++ +H ++ + R + F +I L+ S+
Sbjct: 5 KYVKASQRCLS---LLEQCRTMSQIKQ---MHSHLIVSASRLDPFAAGKIISLFAVSSNA 58
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------------------- 190
I AYK+F + R +W ++I ++ + +A L++
Sbjct: 59 DISHAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLR 118
Query: 191 ---------LAPERDVI---------LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN 232
LA VI + N ++ Y + ++ ARKLFD +DVI+W
Sbjct: 119 ACTDNSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWT 178
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
+++GY +G VE + LF++MPERN SW+ +I GY + G+F E L+ F + G +
Sbjct: 179 ALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTG-LR 237
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
PN A IV L+AC+ LG+LD +W+H Y + NG + + +G AL+DMYAKCG IE A V
Sbjct: 238 PNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSV 297
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F M KD + ++ISGLA HG+ A A+ LF M++ +P+ +TFI +L AC+ MGLV
Sbjct: 298 FEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLV 357
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+EGL F M++ Y I P ++HYGCMVDLL RAG L EA V+ MP+E D+ + LL
Sbjct: 358 DEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLN 417
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
SCRV+ +VEL + +E L E + V+LSN+Y +W V +++ M KK+
Sbjct: 418 SCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKV 477
Query: 533 PGCSSIEVNEVVMLGCLSREL-DRKSIVRAEANMIKLLPQNNHPLTFIVV 581
PGCSSIE++ G +S + S +R E M+ LL +NH L F+++
Sbjct: 478 PGCSSIEID-----GSVSEFIAGDMSYLRVEDVMLVLLGIDNH-LKFLLL 521
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 196/413 (47%), Gaps = 54/413 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIIT--ACAQLKQMTYARKMFDKITDQNVVS 67
EQ T + Q+ + ++ S + +II+ A + +++A K+F + +
Sbjct: 18 EQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFI 77
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN + + + + T + L+ M + +PN +TF VL++C + + G H V+
Sbjct: 78 WNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPV--GLASHAQVI 135
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G+ + FV LI LY+ ++EAA K+F R+V+ WT++INGY+ G + AR
Sbjct: 136 KLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARE 195
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------------------------ 223
LF+ PER+ + W+ +++GY+ + EA +LF+ +
Sbjct: 196 LFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGS 255
Query: 224 ---------------PKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGG 268
+ D + ++ YA G +E +FE+MP+++ F++ LI G
Sbjct: 256 LDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISG 315
Query: 269 YANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEY 323
AN+G + + F RM +E +V PN+ T + VLSAC+R+G +D F+ VY
Sbjct: 316 LANHGQSADAIQLFGRMQSE-KVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIE 374
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
G Q C ++D+ + G++E A + M + D +++ +HG
Sbjct: 375 PGVQHYGC----MVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHG 423
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 72/355 (20%)
Query: 146 STGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVS 205
S K ++A+ + +++ + ++ ++ IVSA L A + + L+ VS
Sbjct: 2 SASKYVKASQRCLSLLEQCRTMSQIKQMHSHL----IVSASRLDPFAAGKIISLF--AVS 55
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
D+ + A KLF +P + WNT++ R+F E E
Sbjct: 56 SNADISH---AYKLFLSLPHRTTFIWNTII-------------RIFVEKNENAT------ 93
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA--------------RLG-- 309
L +K ML G PN+ T VL AC +LG
Sbjct: 94 ------------ALSLYKNMLQTG-FLPNNYTFSFVLRACTDNSPVGLASHAQVIKLGWE 140
Query: 310 ALDF--SKWVHVYAEYNGYQG-----------NVCVGNALIDMYAKCGIIENAVDVFNSM 356
+ DF + +H+YA ++ + +V ALI+ Y K G +E A ++F+ M
Sbjct: 141 SYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELFDQM 200
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
++ ++W+ +I+G G AL LF++++ G P+ +G L AC+++G ++ G
Sbjct: 201 PERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGR 260
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + + + ++ +VD+ A+ G + A ++MP + DA + +L+
Sbjct: 261 WIHAYVDRNGTELDRVLGTA-LVDMYAKCGCIEIACSVFEKMP-DKDAFAFTSLI 313
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 291/559 (52%), Gaps = 72/559 (12%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
F++ QNVVSW A +G+ +N + + LF ++ + PN TF V+++C ++
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY 176
G + LV+K GF + V +LI L I+ A +VF M++R+VV WT++++ Y
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 177 ISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK----------- 225
+ GD+ AR +F+ PER+ I W+ +++ Y EA KLF +M +
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 226 ----------------------------KDVISWNTMLSGYANNGDVEECKRLFEEMPER 257
KDV ++++ Y G ++ + +F+ + E+
Sbjct: 321 CTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK 380
Query: 258 NVFSWNGLIGGYANNGLFF-------------------------------EVLDAFKRML 286
NV WN ++GGY+ NG +VL+ F +L
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGII 346
G+ PN +T +VL ACA + +LD VH G Q ++ VG AL DMYAKCG I
Sbjct: 441 VSGQT-PNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 347 ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCA 405
++ VF M K+ I+W +I GLA G +L LF EM+ E+ P+ + + +L A
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFA 559
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C+H GLV++GL YF SM Y I P+ +HY C+VDLL+R+GRL EA +F++ +P + +A
Sbjct: 560 CSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 466 IWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
WA LL C+ YK+ ++AE ++L +L N A +V+LSNIY GRW DV+ I+ MR
Sbjct: 620 AWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMR 679
Query: 526 DTGFKKLPGCSSIEVNEVV 544
+ G KK GCS +EV V
Sbjct: 680 EKGLKKSGGCSWVEVRNQV 698
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 175/393 (44%), Gaps = 47/393 (11%)
Query: 89 TQMKKLDAMPNCFTFPIVLKSCVKI-------NALREGEELHCLVLKNGFRANIFVGTAL 141
T + L A+ +F ++CV + + +G LH ++K GF + ++ L
Sbjct: 3 TTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWN 201
+ LY + ++ E D ++VV MI+ Y+ G++V AR LF+ PER+ + W+
Sbjct: 63 LILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWS 122
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
++SG + + E+ F++ P ++V+SW +SG
Sbjct: 123 ALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG------------------------ 158
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
+ NGL FE L F R+L G V PND T +V+ AC LG +
Sbjct: 159 -------FVRNGLNFEALKLFFRLLESG-VRPNDVTFTSVVRACGELGDFGLGMSILGLV 210
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G++ + V N+LI + + G I+ A VF+ M+ +D+++W I+ G A
Sbjct: 211 VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREAR 270
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
+F EM E I++ ++ + G EE L F M + P I + C +
Sbjct: 271 RIFDEMPERNE----ISWSAMIARYSQSGYAEEALKLFSKMVQE-GFKPNISCFACTLSA 325
Query: 442 LARAGRLAEAVDF---VKRMPIEADAVIWANLL 471
LA L+ ++ V ++ I+ D I ++L+
Sbjct: 326 LASLRALSAGINIHGHVTKIGIDKDVFIGSSLI 358
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA---- 76
I V G++K +I +I + + R +FD I ++NVV WN+M GY+
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 77 ---------------------------QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKS 109
+NE V+ +F + PN TF VL +
Sbjct: 398 LEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 110 CVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVW 169
C I +L +G +H ++K G + +IFVGTAL ++Y+ I ++ +VF M E+N + W
Sbjct: 458 CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISW 517
Query: 170 TSMINGYISCGDIVSARCLFE 190
T MI G G V + LFE
Sbjct: 518 TVMIQGLAESGFAVESLILFE 538
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 280/529 (52%), Gaps = 70/529 (13%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFNG 74
+ Q+ + GLE+ ++ +++ +L Y R +F ++ N W A+ G
Sbjct: 54 QVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRG 113
Query: 75 YA-QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
YA Q F ++S + N++R + G
Sbjct: 114 YALQGPF--------------------------MESVLLYNSMR----------RQGIGP 137
Query: 134 NIFVGTALIELYSTGKAIEAAYKV-FGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
F TAL+ KA AA V G R V T +I G+ S
Sbjct: 138 VSFTFTALL------KACSAALDVNLG----RQVHTQTILIGGFGS-------------- 173
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
D+ + NT++ Y+ + ++FD+M +DVISW +++ YA G++E LF+
Sbjct: 174 ---DLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFD 230
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+P +++ +W ++ GYA N E L+ F+RM G V ++ T+V V+SACA+LGA
Sbjct: 231 GLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAG-VKTDEVTLVGVISACAQLGAAK 289
Query: 313 FSKWVHVYAEYNGY--QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
++ WV AE +G+ NV VG+ALIDMYAKCG +E+A VF M+ +++ +++++I G
Sbjct: 290 YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
AMHG A+ LF EM P+ +TFIG+L AC+H G+VE+G F M + + P
Sbjct: 350 FAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP 409
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
+HY CMVDLL RAGRL EA++ VK MP+ +W LLG+CR++ N ++A++A L
Sbjct: 410 SEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHL 469
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
ELEP N+++LSNIY GRW DV++++ MR G KK PGCS +E
Sbjct: 470 FELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVE 518
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 157/366 (42%), Gaps = 55/366 (15%)
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ +F+++ N F W LI GYA G F E + + M +G + P T +L AC+
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQG-IGPVSFTFTALLKACSA 151
Query: 308 LGALDFSKWVHVYA-EYNGYQGNVCVGNALIDMYAKCGII-------------------- 346
++ + VH G+ ++ VGN LIDMY KCG +
Sbjct: 152 ALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTS 211
Query: 347 -----------ENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPD 395
E A ++F+ + KD++ W +++G A + R AL +F M+ AG D
Sbjct: 212 LIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTD 271
Query: 396 GITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP--QIEHYGCMVDLLARAGRLAEAVD 453
+T +G++ AC +G + ++ + +A P + ++D+ A+ G + +A
Sbjct: 272 EVTLVGVISACAQLGAAKYA-NWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYK 330
Query: 454 FVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL-----TELEPKNPANFVMLSNIY 508
+RM E + +++++ ++ LA A+E TE++P N F+ +
Sbjct: 331 VFERME-ERNVYSYSSMIVGFAMHG---LAGAAMELFDEMLKTEIKP-NRVTFIGVLTAC 385
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSRELDRKSIVRAEANMIKL 568
G + ++ F + C + +E C+ L R + N++K+
Sbjct: 386 SHAGMVEQGQQL--------FAMMEECHGVAPSED-HYACMVDLLGRAGRLEEALNLVKM 436
Query: 569 LPQNNH 574
+P N H
Sbjct: 437 MPMNPH 442
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 281/540 (52%), Gaps = 39/540 (7%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPR--IITACAQLKQMTYARKMFDKITDQNVV 66
S + H +I + G + I + ++T A+ ++T AR +F++I D VV
Sbjct: 294 STMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVV 353
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP--NCFTFPIVLKSCVKINALREGEELHC 124
SWNAM GY QN LF D MP N ++ ++ + E +L
Sbjct: 354 SWNAMITGYMQNGMVDEAKELF------DRMPFRNTISWAGMIAGYAQNGRSEEALDLLQ 407
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+ +NG ++ T+ S A+E +V V
Sbjct: 408 ALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLA---------------------VK 446
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
A C F + + N ++S Y RNM R++F++M KD +SWN+ ++ N +
Sbjct: 447 AGCQF------NSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNML 500
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
E+ + +F+ M R+V SW +I YA E ++ FK ML E PN + +LS
Sbjct: 501 EDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEK-PNSPILTILLSV 559
Query: 305 CARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
C LG+ + +H A +G + V NAL+ MY KCG ++ VF+SM+ +D+ TW
Sbjct: 560 CGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSH-KVFDSMEERDIFTW 618
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
NT I+G A HG G A+ ++ M++ G +P+ +TF+G+L AC+H GLV+EG +F+SM+
Sbjct: 619 NTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSR 678
Query: 425 DYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAE 484
DY + P +EHY CMVDLL R G + A F+ MPIE D VIW+ LLG+C+++KN E+
Sbjct: 679 DYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGR 738
Query: 485 LALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
A E+L EP N N+VMLSNIY LG W +VA ++ M+ G K PGCS +++ V
Sbjct: 739 RAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKV 798
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 203/388 (52%), Gaps = 6/388 (1%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
++T +QM A +F ++ +N+V+W M +GY + E H +F M A P+
Sbjct: 163 MVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPD 222
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYST-GKAIEAAYKVF 158
F VL + + L E L LVLK GF +++ +GT+++ +Y+ A++ A K F
Sbjct: 223 QSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFF 282
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
M ERN W++MI G I +A ++ P + + +++G + EAR
Sbjct: 283 DGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARI 342
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LF+Q+P V+SWN M++GY NG V+E K LF+ MP RN SW G+I GYA NG E
Sbjct: 343 LFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEA 402
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
LD + + G + P+ +++ + AC+ +GAL+ + VH A G Q N V NALI
Sbjct: 403 LDLLQALHRNG-MLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALIS 461
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KC +E VFN M KD ++WN+ I+ L + A +F M + D ++
Sbjct: 462 MYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSR----DVVS 517
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ I+ A +E + +F++M ++
Sbjct: 518 WTTIISAYAQAERGDEAVEFFKTMLHEH 545
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 188/389 (48%), Gaps = 19/389 (4%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
++ ++ LRE E V +I ++I Y +E A +F + NV
Sbjct: 40 IRELARLGRLREARE----VFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNV 95
Query: 167 VVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK 226
T +++GY G ++ AR +F+ PER+ + WN +VS Y+ ++ AR+LFD MP +
Sbjct: 96 RTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR 155
Query: 227 DVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRML 286
DV SWN+M++GY ++ + + LF++MP+RN+ +W +I GY + D F+ M
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215
Query: 287 TEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK-CGI 345
EG P+ + +VLSA L L + + G++ +V +G +++++Y +
Sbjct: 216 HEG-ASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASA 274
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
++ A+ F+ M ++ TW+T+I+ L+ GR A++++ +P + L
Sbjct: 275 LDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR-DPVKSIPSQTALLTGLAR 333
Query: 406 CTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAV 465
C G + E F+ + P + + M+ + G + EA + RMP + +
Sbjct: 334 C---GRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-NTI 384
Query: 466 IWANLLGSCRVYKNVELAELALERLTELE 494
WA ++ Y +E AL+ L L
Sbjct: 385 SWAGMIAG---YAQNGRSEEALDLLQALH 410
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARK----------- 55
+H LET + +H + V +G + + Y+ +I+ + + M Y R+
Sbjct: 429 SHIGALETGRQVHSL---AVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTV 485
Query: 56 --------------------MFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
+FD + ++VVSW + + YAQ E V F M
Sbjct: 486 SWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEH 545
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
PN I+L C + + + G+++H + +K+G + + V AL+ +Y + ++
Sbjct: 546 EKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SH 604
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN--- 212
KVF M+ER++ W + I G G A ++E V+ G ++ +
Sbjct: 605 KVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAG 664
Query: 213 -MIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
+ E + F M + ++ + M+ GDV+ ++ +MP E + W+ L
Sbjct: 665 LVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSAL 724
Query: 266 IGG 268
+G
Sbjct: 725 LGA 727
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 292/530 (55%), Gaps = 9/530 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ V+ SG E + ++ ++ + ARK+F+ + + V+WN + GY QN
Sbjct: 267 QVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNG 326
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
F LF M P+ TF L S ++ +LR +E+H ++++ ++++ +
Sbjct: 327 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 386
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPER 195
ALI++Y G +E A K+F + +V V T+MI+GY+ G + A R L +
Sbjct: 387 ALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVP 446
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPKK---DVISWNTMLSG-YANNGDVEECKRLF 251
+ + +++ + + ++L + KK ++++ + ++ YA G ++ F
Sbjct: 447 NSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFF 506
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
M E + WN +I ++ NG +D F++M G F + ++ + LS+ A L AL
Sbjct: 507 RRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKF-DSVSLSSALSSAANLPAL 565
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ K +H Y N + + V +ALIDMY+KCG + A VFN M K+ ++WN+II+
Sbjct: 566 YYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAY 625
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
HG L LFHEM AG PD +TF+ I+ AC H GLV EG+ YF M +Y I +
Sbjct: 626 GNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGAR 685
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY CMVDL RAGRL EA D +K MP DA +W LLG+CR++ NVELA+LA L
Sbjct: 686 MEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLL 745
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+PKN +V+LSN++ D G W V +++ M++ G +K+PG S I+VN
Sbjct: 746 ELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVN 795
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 221/497 (44%), Gaps = 81/497 (16%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ TQ++ G+ ++ R++ +++ +F + N + WN M G
Sbjct: 65 QVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLG 124
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ ++ + +M + P+ +TFP V+K+C +N + +H GF ++FVG+
Sbjct: 125 WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGS 184
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDI----------------- 182
ALI+LY+ I A +VF E+ +R+ ++W M++GY+ GD
Sbjct: 185 ALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV 244
Query: 183 --VSARCLFELAPER--------------------DVILWNTIVSGYIDVRNMIEARKLF 220
V+ C+ + R D + NT+V+ Y N+ +ARKLF
Sbjct: 245 NSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
+ MP+ D ++WN +++GY NG +E LF
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNA--------------------------- 337
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMY 340
M++ G V P+ T + L + G+L K VH Y + +V + +ALID+Y
Sbjct: 338 ----MISAG-VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIY 392
Query: 341 AKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFI 400
K G +E A +F D+ +ISG +HG A++ F + G +P+ +T
Sbjct: 393 FKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMA 452
Query: 401 GILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY----GCMVDLLARAGRLAEAVDFVK 456
+L AC + ++ G + + D + Q+E+ + D+ A+ GRL A +F +
Sbjct: 453 SVLPACAALAALKLG----KELHCDI-LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFR 507
Query: 457 RMPIEADAVIWANLLGS 473
RM E D++ W +++ S
Sbjct: 508 RMS-ETDSICWNSMISS 523
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 19/311 (6%)
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
+ ++C + +++ ++H ++ G + + ++ LY I +F ++ N
Sbjct: 50 LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCN 109
Query: 166 VVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYID-------VRN 212
+ W MI G G A + ++P++ + G ++ V N
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
AR L + D+ + ++ YA+NG + + +R+F+E+P+R+ WN ++ GY +
Sbjct: 170 --TARSLGFHV---DLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKS 224
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G F + F M T + N T +LS CA G VH +G++ + V
Sbjct: 225 GDFNNAMGTFCGMRTSYSMV-NSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQV 283
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
N L+ MY+KCG + +A +FN+M D +TWN +I+G +G A LF+ M +AG
Sbjct: 284 ANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGV 343
Query: 393 MPDGITFIGIL 403
PD +TF L
Sbjct: 344 KPDSVTFASFL 354
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 73/403 (18%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
+ +H ++ + +V + Y+ +I + + ARK+F + T +V AM +
Sbjct: 362 SLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMIS 421
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
GY + + + F + + +PN T VL +C + AL+ G+ELHC +LK
Sbjct: 422 GYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLEN 481
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL-- 191
+ VG+A+ ++Y+ ++ AY+ F M E + + W SMI+ + G A LF
Sbjct: 482 IVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMG 541
Query: 192 -------------------------------------APERDVILWNTIVSGYIDVRNMI 214
A D + + ++ Y +
Sbjct: 542 MSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLA 601
Query: 215 EARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGL 274
AR +F+ M K+ +SWN++++ Y N+G EC
Sbjct: 602 LARCVFNLMAGKNEVSWNSIIAAYGNHGCAREC--------------------------- 634
Query: 275 FFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVHVYAEYNGYQGNVCVG 333
LD F ML G V P+ T + ++SAC G + + + H G +
Sbjct: 635 ----LDLFHEMLRAG-VHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHY 689
Query: 334 NALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGLAMHG 375
++D+Y + G + A D SM T D W T++ +HG
Sbjct: 690 ACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHG 732
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
++ AC+ + ++ VH G + + ++ +Y CG I + ++F ++
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+ + WN +I GL M G AL + +M + PD TF ++ AC + V +
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCM-VV 167
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ A + ++ L A G + +A +P + D ++W +L
Sbjct: 168 HNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP-QRDTILWNVML 218
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 280/544 (51%), Gaps = 68/544 (12%)
Query: 2 KDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDK 59
K T A + T K L QI TQ+V +GL + + + + + A + Y+ ++ D+
Sbjct: 9 KHPTIALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQ 68
Query: 60 ITDQNVVSWNAMFNGYAQN-EFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALR 117
+ + N+M Y+++ H++ ++ D M P+ +TF
Sbjct: 69 CAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTF-------------- 114
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
N V T G A+ A G
Sbjct: 115 ----------------NFLVRTCAQSACEAGPAVHGALIKHG------------------ 140
Query: 178 SCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG 237
FE P + + ++ Y ++ + ++F+ + K D++ TM+S
Sbjct: 141 -----------FEYDPHVE----SGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSA 185
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
A GD+ + LF+ MP+R+ SWN +I GYA G E L+ FK M +G V N+ +
Sbjct: 186 CAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDG-VKVNEVS 244
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+++V++AC LGALD KW H Y E N Q V +G AL+DMY KCG ++ A+ VF M+
Sbjct: 245 MISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMN 304
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K++ TW+T I GLAM+G G L LF MK+ G P+ ITFI +L C+ +G V+EG S
Sbjct: 305 EKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRS 364
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
+F SM D+ I P++EHYGCMVDL RAGRL EA++F+ MP++ A W LL +CR+Y
Sbjct: 365 HFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMY 424
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
KN+EL E A +L E+E KN +V LSNIY D G W V+ ++ +M+ G KLPGCS
Sbjct: 425 KNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSV 484
Query: 538 IEVN 541
+EVN
Sbjct: 485 MEVN 488
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 290/542 (53%), Gaps = 26/542 (4%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ V+ +G + ++ ++ A+ M ARK+FD + +NVV W + GY QN
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V +F M + + P+ FT I L +C + ++ G++ H ++K + +G A
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI-----NGYISCGDIVSARCLFELAPER 195
L LYS +++++ K F E E++V+ WT++I NG G + LFE
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 196 D------VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
D + L +TI S + ++ + KL + ++ N+++ Y G ++E K
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHE---SNLRITNSLVYLYLKCGCIDEAKN 238
Query: 250 LFEEMPERNVFSWNGLIGGYAN-----------NGLFFEVLDAFKRMLTEGRVFPNDATI 298
LF M +N+ +WN +I G+A E L + ++ GR P+ T+
Sbjct: 239 LFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRK-PDLFTL 297
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
++L+ C+RL AL+ + +H +G+ +V VG AL+DMY KCG IE A F M T
Sbjct: 298 SSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMST 357
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
+ LI+W ++I+ A HG+ AL LF +M+ AG P+ ITF+G+L AC+H G+V+E L Y
Sbjct: 358 RTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEY 417
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
F+ M +Y I P ++HYGC+VD+ R GRL EA D +KRM +E + IW L+ CR +
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
N EL A E+L +L+P++ +V+L N+Y RW+DV+ ++ M++ KL S I
Sbjct: 478 NEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRI 537
Query: 539 EV 540
+
Sbjct: 538 SI 539
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 138/278 (49%), Gaps = 24/278 (8%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+H + T++ G E + IT ++ + + A+ +F+++ +N+++WNAM G+A
Sbjct: 203 QVHSLSTKL---GHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHA 259
Query: 77 Q-----------NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
Q + + ++ ++ + P+ FT +L C ++ AL +GE++H
Sbjct: 260 QAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQ 319
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K+GF +++ VGTAL+++Y +IE A K F +M R ++ WTSMI + G A
Sbjct: 320 TIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHA 379
Query: 186 RCLFE---LAPER-DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLS 236
LFE LA R + I + +++ + EA + F+ M K+ I + ++
Sbjct: 380 LQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVD 439
Query: 237 GYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYANNG 273
+ G ++E + + M E N F W LI G N+G
Sbjct: 440 MFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 11/197 (5%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI Q + SG + ++ + + ARK F ++ + ++SW +M +A++
Sbjct: 315 QIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHG 374
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF M+ PN TF VL +C + E E + +++ ++ +
Sbjct: 375 QSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALE-YFEIMQKEYKIKPVMDH 433
Query: 140 --ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD----IVSARCLFELA 192
L++++ ++ A+ V MD E N +W +I G + G+ +A L +L
Sbjct: 434 YGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLK 493
Query: 193 P---ERDVILWNTIVSG 206
P E V+L N +S
Sbjct: 494 PRSTETYVVLLNMYISA 510
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 291/542 (53%), Gaps = 16/542 (2%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L K + V+ GLE + +I ++ A ++F +I + +VV +
Sbjct: 274 ELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSL 333
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF---PIVLKSCVKINALREGEELHCLVL 127
M + + +++ +F QM + PN +TF IV +N R +H ++
Sbjct: 334 MISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRS---IHAHIV 390
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K+GF V A++ +Y A++ A F M ++ W ++++G+ S +
Sbjct: 391 KSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLR 450
Query: 188 LFE-------LAPERDVILWNTIVSGYIDVRNMIEARK-LFDQMPKKDVISWNTMLSGYA 239
+F+ LA + + + +D+R + + + D +L Y
Sbjct: 451 IFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYV 510
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
G + +F+ + ER+VFSW ++ YA + ++ F+ ML E + PNDAT+
Sbjct: 511 QAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKR-PNDATLA 569
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
T LS C+ L L +H Y +G+ +V V +AL+DMY KCG + +A +F+ DT
Sbjct: 570 TSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTH 628
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
DL+ WNTII G A HG G AL F EM + G +PD ITF+G+L AC+H GL++EG YF
Sbjct: 629 DLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYF 688
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
+ ++ Y I P +EHY CMVD+LA+AG+LAEA + MP+ DA +W +LG+CR++ N
Sbjct: 689 KLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGN 748
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+E+AE A E+L E +P + ++ ++LSNIY DL RW DVA+++ + D G KK PGCS IE
Sbjct: 749 IEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIE 808
Query: 540 VN 541
+N
Sbjct: 809 IN 810
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 202/444 (45%), Gaps = 19/444 (4%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ Q V Y++ ++ A ++ A + ++ VSWNA+ N YA++
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ V+++F ++ + + +T P VLK C+++ + G+ +H LV+K G + +
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNN 301
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY------ISCGDIVSARCLFELAP 193
LIE+YS + E AY+VF +DE +VV + MI+ + DI + P
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361
Query: 194 ERDVILWNTIV---SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
+ + IV +G +++ I A + + + + ++ Y G V++
Sbjct: 362 NQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVC-DAIVGMYVKTGAVQDAILA 420
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F+ M ++ SWN L+ G+ + L FK ++ EG V N T V +L C L
Sbjct: 421 FDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEG-VLANKYTYVGILRCCTSLMD 479
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L F VH +G+QG+ V L+DMY + G NA VF+ + +D+ +W ++S
Sbjct: 480 LRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMST 539
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYS 427
A G A+ F M + P+ T L C+ + + GL SY + S
Sbjct: 540 YAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSS 599
Query: 428 IVPQIEHYGCMVDLLARAGRLAEA 451
+V +VD+ + G LA+A
Sbjct: 600 VVSSA-----LVDMYVKCGNLADA 618
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 157/341 (46%), Gaps = 32/341 (9%)
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
++ L+ C ALR G+ LH +L++G R + F+ +L+ +Y + A VF M
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI---------LWNTIVSGYIDVRN 212
R+VV WT+M++ + GD +A LF E V+ L V +
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 213 MIEARK-----LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ A+ LFD ++++ Y + G+V+ +R + P R+ SWN L+
Sbjct: 182 QVHAQAVKLEGLFDPYVS------SSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLN 235
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
YA +G + +V+ F +++ G + T+ TVL C LG + VH G +
Sbjct: 236 EYARDGDYAKVMLVFDKLVESGDEI-SKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLE 294
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
+ + N LI+MY+KC E+A +VF +D D++ + +IS H A +F +M
Sbjct: 295 TDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQM 354
Query: 388 KNAGEMPDGITFIGI-----------LCACTHMGLVEEGLS 417
+ G P+ TF+G+ LC H +V+ G S
Sbjct: 355 SDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFS 395
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 223/519 (42%), Gaps = 35/519 (6%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
A S L K LH +++ SG ++ ++ + ++ AR +FD + ++VV
Sbjct: 71 AASRALRRGKALH---ARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVV 127
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
+W AM + + LF +M + +PN F LK+C + L ++H
Sbjct: 128 AWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQA 187
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K + +V ++L+E Y + ++ A + + R+ V W +++N Y GD
Sbjct: 188 VKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVM 247
Query: 187 CLF----ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGY 238
+F E E T++ +++ + + + K+ D + N ++ Y
Sbjct: 248 LVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMY 307
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
+ E+ +F + E +V + +I + + + E D F +M G V PN T
Sbjct: 308 SKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMG-VKPNQYTF 366
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
V + +R G ++ + +H + +G+ V +A++ MY K G +++A+ F+ M
Sbjct: 367 VGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQG 426
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL-- 416
D+ +WNT++SG L +F E+ G + + T++GIL CT + + G
Sbjct: 427 PDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQV 486
Query: 417 ------SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
S FQ DY + ++D+ +AG A R+ E D W +
Sbjct: 487 HACVLKSGFQG---DYDVSKM------LLDMYVQAGCFTNARLVFDRLK-ERDVFSWTVV 536
Query: 471 LGSCRVYKNVELAELALERLTEL--EPKNPANFVMLSNI 507
+ + Y + E A+E + E K P + + +++
Sbjct: 537 MST---YAKTDEGEKAIECFRSMLRENKRPNDATLATSL 572
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 295/603 (48%), Gaps = 79/603 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q +++ SG + YI+ ++I + + A + I D + S++++ + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F++M +P+ P + K C +++A + G+++HC+ +G + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 140 ALIELYSTGKAIEAAYKVFGEMDER----------------------------------- 164
++ +Y + A KVF M ++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 165 NVVVWTSMINGYIS-------------------CGDIVSARCLFELAPERDVILWNTIVS 205
N+V W +++G+ C D V+ + + +++ ++
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 206 GYIDVRNMIEAR--------------------KLFDQMPKKDVISWNTMLSGYANNGDVE 245
GY+ + +++ + LF+Q + N ++G + NG V+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 246 ECKRLFEEMPER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
+ +FE E+ NV SW +I G A NG E L+ F+ M G V PN TI ++
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNHVTIPSM 394
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L AC + AL + H +A NV VG+ALIDMYAKCG I + VFN M TK+L
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ WN++++G +MHG+ +S+F + PD I+F +L AC +GL +EG YF+
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M+ +Y I P++EHY CMV+LL RAG+L EA D +K MP E D+ +W LL SCR+ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAE+A E+L LEP+NP +V+LSNIY G W +V I+ M G KK PGCS I+V
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 542 EVV 544
V
Sbjct: 635 NRV 637
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 290/550 (52%), Gaps = 46/550 (8%)
Query: 39 RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP 98
R+I + AR++FD I + + + + + + + +++ +++ P
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76
Query: 99 NCFTFPIVLKSC-VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
+ F K+C V +ALR +E+H + G +++FVG ALI Y K +E A +V
Sbjct: 77 DMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 135
Query: 158 FGEMDERNVVVWTSMINGYISCG-----------------------------------DI 182
F ++ R+VV WTS+ + Y+ CG D+
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195
Query: 183 VSARCLFELAPERDVIL----WNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGY 238
S + + A +++ + +VS Y ++ EAR +FD MP +DV+SWN +L+ Y
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255
Query: 239 ANNGDVEECKRLFEEMPERNV----FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
N + E+ LF +M V +WN +IGG NG E ++ F++M G PN
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG-FKPN 314
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ TI ++L AC+ L K +H Y + G++ AL+ MYAKCG + + +VF+
Sbjct: 315 EITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFD 374
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M KD++ WNT+I AMHG G AL LF +M + P+ +TF G+L C+H LVEE
Sbjct: 375 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEE 434
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G+ F SM D+ + P HY C+VD+ +RAGRL EA F++ MP+E A W LL +C
Sbjct: 435 GVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC 494
Query: 475 RVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPG 534
RVYKNVELA+++ ++L E+EP NP N+V L NI W + +++++ M++ G K PG
Sbjct: 495 RVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPG 554
Query: 535 CSSIEVNEVV 544
CS ++V V
Sbjct: 555 CSWLQVGNKV 564
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L+ K +I V G+ + ++ +++ A+ + AR +FD + ++VVSWN
Sbjct: 191 ELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNG 250
Query: 71 MFNGYAQNEFHRT-----------------------------------VVVLFTQMKKLD 95
+ Y +N+ + V +F +M+K+
Sbjct: 251 VLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG 310
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
PN T +L +C LR G+E+HC V ++ ++ TAL+ +Y+ + +
Sbjct: 311 FKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSR 370
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVR 211
VF M ++VV W +MI G+ A LF+ + + + + ++SG R
Sbjct: 371 NVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSR 430
Query: 212 NMIEARKLF-----DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
+ E ++F D + + D ++ ++ Y+ G + E + + MP E +W L
Sbjct: 431 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 490
Query: 266 IGG 268
+
Sbjct: 491 LAA 493
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 289/531 (54%), Gaps = 37/531 (6%)
Query: 15 TKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
T L + Q++ G+ S + ++++ + LK Y+ +F ++N NA+ G
Sbjct: 42 TASLRHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRG 100
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+N + V F M +L P+ TFP VLKS K+ G LH LKN +
Sbjct: 101 LTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCD 160
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
FV +L+++Y+ ++ A++VF E +P+
Sbjct: 161 SFVRLSLVDMYAKTGQLKHAFQVF-------------------------------EESPD 189
Query: 195 R----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
R +++WN +++GY ++M A LF MP+++ SW+T++ GY ++G++ K+L
Sbjct: 190 RIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQL 249
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FE MPE+NV SW LI G++ G + + + ML +G + PN+ TI VLSAC++ GA
Sbjct: 250 FELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG-LKPNEYTIAAVLSACSKSGA 308
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L +H Y NG + + +G AL+DMYAKCG ++ A VF++M+ KD+++W +I G
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A+HGR A+ F +M +GE PD + F+ +L AC + V+ GL++F SM +DY+I P
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++HY +VDLL RAG+L EA + V+ MPI D WA L +C+ +K AE + L
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNL 488
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+P+ +++ L + G +DV + +++++ ++ G S IE++
Sbjct: 489 LELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELD 539
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/588 (32%), Positives = 303/588 (51%), Gaps = 51/588 (8%)
Query: 1 MKDTTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFD 58
+K T E+ T H QI Q++ L + R+I +A + + A +F
Sbjct: 30 LKHATLILLEKCSTRDHFKQILAQIMRINLIGQTFPMSRLILFSAITHPENLDMAVLLFR 89
Query: 59 KITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR 117
T N+ +N M + + + + + PN TF +L++ L
Sbjct: 90 HHTPHPNLYIYNTMISALSLSL--NQSFAFYNSLLSSCIYPNRSTFLFLLQAS---KFLS 144
Query: 118 EGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYI 177
+ ++HC + G ++ L+++Y + + AY+VF +M + V + MI GY
Sbjct: 145 QVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYA 204
Query: 178 SCG-DIVSARCLFE-----LAPER-----------------------------------D 196
G +I + + L E L P+ +
Sbjct: 205 KKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSN 264
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+IL N ++ Y+ + + A+ +F+ + +KD ISWNTM++GYA G++E FE+MP
Sbjct: 265 LILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPC 324
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
R++ SWN +I GYA G V F+ M+ E ++P+ TI+ ++SA A +GAL +W
Sbjct: 325 RDLVSWNSIIAGYAQKGDCLMVQRLFENMVAEN-IWPDFVTIINLVSAAAEIGALHHGRW 383
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
+H + + + +G+A IDMY KCG I+ A VF + KD+ W T+I+G A HG
Sbjct: 384 IHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGY 443
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
G+ AL LF+EM+ MP+ +TF+ +L AC+H G V +GL F SM Y I P +EHYG
Sbjct: 444 GSKALQLFYEMQEY-VMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYG 502
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPK 496
C+VDLL R+GR +E D ++ MP++ IW +L +CR Y N+E+AE+A + L +LEP+
Sbjct: 503 CLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPE 562
Query: 497 NPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+LSNIY GRWK +I+ M G KK GCSS+ V+ ++
Sbjct: 563 KEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGII 610
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 295/533 (55%), Gaps = 9/533 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q + V +G Y+ ++ + + ARK+FD++ ++N VSW M +GYA ++
Sbjct: 139 QAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSD 198
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V +F M++ + + N F VL + + G ++H L +KNG A + V
Sbjct: 199 IADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVAN 258
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
AL+ +Y+ +++ A + F ++N + W++M+ GY GD A LF V+
Sbjct: 259 ALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLP 318
Query: 200 WNTIVSGYI----DVRNMIEARKL----FDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
+ G I D+ ++E +++ F + + ++ YA G + + ++ F
Sbjct: 319 SEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGF 378
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
E + + +V W +I GY NG + L+ + +M E RV PN+ T+ +VL AC+ L AL
Sbjct: 379 ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQME-RVIPNELTMASVLRACSSLAAL 437
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D K +H G++ V +G+AL MY KCG +++ +F M ++D+I+WN +ISGL
Sbjct: 438 DQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGL 497
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ +G G AL LF +M G PD +TF+ +L AC+HMGLV+ G YF+ M +++I P
Sbjct: 498 SQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPM 557
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY CMVD+L+RAG+L EA +F++ ++ +W LLG+C+ ++N EL A E+L
Sbjct: 558 VEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLV 617
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL + +V+LS+IY LG ++V R++ M+ G K PGCS IE+ +V
Sbjct: 618 ELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLV 670
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 256/520 (49%), Gaps = 21/520 (4%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITD--QNV 65
H++ + + LH +++ +G S Y+T + A+ +++A +FD I D ++
Sbjct: 23 HNKNILKGRTLH---ARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDD 79
Query: 66 VSWNAMFNGYAQNEFHRT---VVVLFTQMKKLD-AMPNCFTFPIVLKSCVKINALREGEE 121
VSWN++ N ++QN + + LF +M + + +PN T V + ++ + G++
Sbjct: 80 VSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQ 139
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
H + +K G +++VG++L+ +Y + A K+F M ERN V W +MI+GY S
Sbjct: 140 AHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDI 199
Query: 182 IVSARCLFELAPERDVI----LWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS----WNT 233
A +FEL + I +++S + R++ K +++ N
Sbjct: 200 ADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANA 259
Query: 234 MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
+++ YA G +++ R FE ++N +W+ ++ GYA G + L F +M + G V P
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSG-VLP 318
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
++ T+V V++AC+ L A+ K +H +A G+ + V +A++DMYAKCG + +A F
Sbjct: 319 SEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGF 378
Query: 354 NSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVE 413
+ D++ W +II+G +G G L+L+ +M+ +P+ +T +L AC+ + ++
Sbjct: 379 ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALD 438
Query: 414 EGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW-ANLLG 472
+G + + Y ++ + + + G L + RMP D + W A + G
Sbjct: 439 QG-KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP-SRDVISWNAMISG 496
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ + EL + L E +P FV L + +G
Sbjct: 497 LSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 180/410 (43%), Gaps = 79/410 (19%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM--DER 164
L C + +G LH +LK G ++I+V + LY+ + A +F + +++
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 165 NVVVWTSMINGY---------------------------------------ISCGDIVSA 185
+ V W S+IN + + D+V+
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137
Query: 186 RCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANN 241
+ +A + DV + +++++ Y + +ARKLFD+MP+++ +SW TM+SGYA++
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASS 197
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
++ +FE M N+ + +V
Sbjct: 198 DIADKAVEVFELMRREEEIQ--------------------------------NEFALTSV 225
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
LSA + + VH A NG V V NAL+ MYAKCG +++AV F K+
Sbjct: 226 LSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNS 285
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
ITW+ +++G A G AL LF++M ++G +P T +G++ AC+ + V EG S
Sbjct: 286 ITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEG-KQMHS 344
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
A Q+ +VD+ A+ G LA+A + + + D V+W +++
Sbjct: 345 FAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ-QPDVVLWTSII 393
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P ++ L C + + +H G ++ V N +++YAK + +A+ +
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 353 FNSM--DTKDLITWNTIISGLAMHGRGAG---ALSLFHEMKNAGE-MPDGITFIGILCAC 406
F+S+ + KD ++WN++I+ + + + A+SLF M A +P+ T G+ A
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 407 THMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVI 466
+++ V G S+A+ + ++++ + G + +A RMP E + V
Sbjct: 129 SNLSDVVAG-KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP-ERNTVS 186
Query: 467 WANLLGSCRVYKNVELAELALE 488
WA ++ Y + ++A+ A+E
Sbjct: 187 WATMISG---YASSDIADKAVE 205
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 295/573 (51%), Gaps = 75/573 (13%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L K +H + +V SG + + A+ +Q+ ARK+FD++ ++++VSWN
Sbjct: 150 ELRVGKEIHGL---LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY+QN R + + M + + P+ T VL + + + G+E+H +++G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F + + + TAL+++Y+ CG + +AR LF+
Sbjct: 267 FDSLVNISTALVDMYA-------------------------------KCGSLETARQLFD 295
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------P-------------------- 224
ER+V+ WN+++ Y+ N EA +F +M P
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 225 -------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
++V N+++S Y +V+ +F ++ R + SWN +I G+A
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG + L+ F +M + V P+ T V+V++A A L +KW+H + NV
Sbjct: 416 NGRPIDALNYFSQMRSR-TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V AL+DMYAKCG I A +F+ M + + TWN +I G HG G AL LF EM+
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+G+TF+ ++ AC+H GLVE GL F M +YSI ++HYG MVDLL RAGRL EA
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
DF+ +MP++ ++ +LG+C+++KNV AE A ERL EL P + V+L+NIY
Sbjct: 595 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAA 654
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
W+ V +++V+M G +K PGCS +E+ NEV
Sbjct: 655 SMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 238/502 (47%), Gaps = 32/502 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E+ + K L QI V +GL + + ++++ + + A ++F+ I + V ++
Sbjct: 45 ERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYH 104
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M G+A+ + F +M+ D P + F +LK C LR G+E+H L++K+
Sbjct: 105 TMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIV 183
GF ++F T L +Y+ + + A KVF M ER++V W +++ GY G ++V
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 184 SARCLFELAPERDVILWNTIVS--------GYIDVRNMIEA---RKLFDQMPKKDVISWN 232
+ C L P + TIVS I V I R FD + V
Sbjct: 225 KSMCEENLKPS-----FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL----VNIST 275
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
++ YA G +E ++LF+ M ERNV SWN +I Y N E + F++ML EG V
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VK 334
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P D +++ L ACA LG L+ +++H + G NV V N+LI MY KC ++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F + ++ L++WN +I G A +GR AL+ F +M++ PD T++ ++ A + +
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ + M + + +VD+ A+ G + A + M E W ++
Sbjct: 455 HHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMID 512
Query: 473 SCRVYKNVELAELALERLTELE 494
Y + ALE E++
Sbjct: 513 G---YGTHGFGKAALELFEEMQ 531
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 292/537 (54%), Gaps = 21/537 (3%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
++ ++ A ++ ++ ARK+FD+I D++VVSW +M Y QNE ++LF +M++
Sbjct: 170 FVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREG 229
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
N FT ++ +C K+ L +G+ +H V+KNG N ++ T+L+ +Y I A
Sbjct: 230 FLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDA 289
Query: 155 YKVFGEMDER------NVVVWTSMINGYISCG------DIVSARCLFELAPERDVILWNT 202
VF E ++V WT+MI GY G ++ + + + + P + + +
Sbjct: 290 RSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILP--NSVTLAS 347
Query: 203 IVSGYIDVRNMIEARKLFDQMPK---KDVISWNTMLSGYANNGDVEECKRLFEEMPERNV 259
++S + N++ + L + K D N+++ YA G + + +F +++V
Sbjct: 348 LLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDV 407
Query: 260 FSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHV 319
SWN +I GYA +G +E LD F RM E P+ T+V VLSACA +GA +H
Sbjct: 408 VSWNSVISGYAQSGSAYEALDLFNRMRMES-FLPDAVTVVGVLSACASVGAHQIGLSLHG 466
Query: 320 YA-EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGA 378
+A +Y ++ VG AL++ YAKCG +A VF+ M K+ +TW +I G M G G
Sbjct: 467 FALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGV 526
Query: 379 GALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCM 438
G+L+LF +M +P+ + F +L AC+H G+VEEGL F M + + VP ++HY CM
Sbjct: 527 GSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACM 586
Query: 439 VDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNP 498
VDLLARAG L EA+DF+ +MP++ ++ L C ++ N + E+A+ R+ EL P
Sbjct: 587 VDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQA 646
Query: 499 ANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE--VNEVVMLGCLSREL 553
+V++SN+Y GRW V ++ ++ G K+PG S +E VN + L L
Sbjct: 647 CYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNNTTHVNVLQSHL 703
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 222/463 (47%), Gaps = 45/463 (9%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKK-LDAMP 98
+I+ A + +AR +F ++ S+ + + N+ H VV + + L +
Sbjct: 74 LISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGSFN 133
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
+ F I+LK+ ++ + +LHC +LK+ A+ FV T+L++ YS + A KVF
Sbjct: 134 DLVVFSILLKTASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARKVF 192
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
E+ +R+VV WTSMI Y V C E ++L+N + G++D N+
Sbjct: 193 DEIPDRSVVSWTSMIVAY------VQNEC-----AEEGLMLFNRMREGFLD-GNVFTVGS 240
Query: 219 LFDQMPK---------------KDVISWN-----TMLSGYANNGDVEECKRLFEEMPER- 257
L K K+ I N ++L+ Y GD+ + + +F+E
Sbjct: 241 LVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVST 300
Query: 258 -----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
++ W +I GY G L+ F R+ PN T+ ++LSACA+L +
Sbjct: 301 CGGGDDLVFWTAMIVGYTQRGYPQAALELFTDK-KWYRILPNSVTLASLLSACAQLENIV 359
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
K +HV G + + N+L+DMYAKCG+I +A VF + KD+++WN++ISG A
Sbjct: 360 MGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYA 418
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
G AL LF+ M+ +PD +T +G+L AC +G + GLS A+ Y +V
Sbjct: 419 QSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLS-LHGFALKYGLVSSS 477
Query: 433 EHYG-CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ G +++ A+ G A M E +AV WA ++G C
Sbjct: 478 IYVGTALLNFYAKCGDATSARMVFDGMG-EKNAVTWAAMIGGC 519
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 171/380 (45%), Gaps = 27/380 (7%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT------DQNVVSW 68
LHQ + V+ +G+E + Y+ ++ + + AR +FD+ + ++V W
Sbjct: 251 LHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFW 310
Query: 69 NAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
AM GY Q + + + LFT K +PN T +L +C ++ + G+ LH LV+K
Sbjct: 311 TAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVK 370
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G + + +L+++Y+ I A+ VF +++VV W S+I+GY G A L
Sbjct: 371 YGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDL 429
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARK---------LFDQMPKKDVISWNTMLSGYA 239
F + V G + + A + L + + +L+ YA
Sbjct: 430 FNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYA 489
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
GD + +F+ M E+N +W +IGG G L F+ ML E V PN+
Sbjct: 490 KCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELV-PNEVVFT 548
Query: 300 TVLSACARLGALDFSKWVHVY--AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
T+L+AC+ G ++ + + E N + ++ ++D+ A+ G ++ A+D + M
Sbjct: 549 TLLAACSHSGMVEEGLMIFDFMCKELN-FVPSMKHYACMVDLLARAGNLQEALDFIDKMP 607
Query: 358 TKDLITWNTIISGLAMHGRG 377
+ + + G +HG G
Sbjct: 608 VQPGVG----VFGAFLHGCG 623
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+ GAH Q+ + H ++ +V+S + Y+ ++ A+ T AR +FD + ++
Sbjct: 454 SVGAH--QIGLSLHGFALKYGLVSSSI----YVGTALLNFYAKCGDATSARMVFDGMGEK 507
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
N V+W AM G + LF M K + +PN F +L +C + EG +
Sbjct: 508 NAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIF 567
Query: 124 CLVLKN-GFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCG- 180
+ K F ++ +++L + ++ A +M + V V+ + ++G CG
Sbjct: 568 DFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHG---CGL 624
Query: 181 ----DI--VSARCLFELAPERD---VILWNTIVS----GYI-DVRNMIEARKL 219
D V+ R + EL P++ V++ N S G + +VR MI+ R L
Sbjct: 625 HSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGL 677
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 281/546 (51%), Gaps = 73/546 (13%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIIT--ACAQLKQMTYARKMFDKITDQNVVS 67
E + QIQ +TSGL + R+++ A + + ++ ++F +I + +
Sbjct: 20 ENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISN 79
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN++ G+++ + V +F +M + P+ T+P + K+ +++ LR +HC +
Sbjct: 80 WNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRLALAVHCRIA 139
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
K G + F+ +LI +Y SCGDI SAR
Sbjct: 140 KEGLWFDRFIANSLIHMYG-------------------------------SCGDIGSAR- 167
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
K+FD+M ++ +SWN ML GYA GD++
Sbjct: 168 ------------------------------KVFDEMLIRNSVSWNAMLDGYAKCGDLDSA 197
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+++FE MP+R+V SW+ +I G G + L F+RM G N+ T+V+VL ACA
Sbjct: 198 RQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPK-ANEVTMVSVLCACAH 256
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNS--MDTKDLITWN 365
LGAL+ + +H Y N + + + +L+DMYAKCG IE A+ VF MD D++ WN
Sbjct: 257 LGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWN 316
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
TII GLA HG +L LF EM+ G +PD IT++ + AC H GLV E +F+S+
Sbjct: 317 TIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQ 376
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+VP+ EHY CMVD+L+RAG+LAEA DF+ +MP+E A + LL C ++ +LAE
Sbjct: 377 -GMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAER 435
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVM 545
+L ELEP + ++ LSN+Y + W + ++ AM G KK PG S +EV
Sbjct: 436 VGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEV----- 490
Query: 546 LGCLSR 551
LG L R
Sbjct: 491 LGTLHR 496
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,078,227,800
Number of Sequences: 23463169
Number of extensions: 378282347
Number of successful extensions: 988318
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8027
Number of HSP's successfully gapped in prelim test: 3489
Number of HSP's that attempted gapping in prelim test: 775925
Number of HSP's gapped (non-prelim): 61368
length of query: 589
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 441
effective length of database: 8,886,646,355
effective search space: 3919011042555
effective search space used: 3919011042555
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)