BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007808
(589 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 328/530 (61%), Gaps = 5/530 (0%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
+ Q+ Q++ L + +I P++I+A + +Q A ++F+++ + NV N++ +A
Sbjct: 34 QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHA 93
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
QN +F++M++ + FT+P +LK+C + L + +H + K G ++I+
Sbjct: 94 QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 137 VGTALIELYST--GKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V ALI+ YS G + A K+F +M ER+ V W SM+ G + G++ AR LF+ P+
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
RD+I WNT++ GY R M +A +LF++MP+++ +SW+TM+ GY+ GD+E + +F++M
Sbjct: 214 RDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKM 273
Query: 255 P--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
P +NV +W +I GYA GL E +M+ G F + A ++++L+AC G L
Sbjct: 274 PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-DAAAVISILAACTESGLLS 332
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+H + + N V NAL+DMYAKCG ++ A DVFN + KDL++WNT++ GL
Sbjct: 333 LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLG 392
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG G A+ LF M+ G PD +TFI +LC+C H GL++EG+ YF SM Y +VPQ+
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
EHYGC+VDLL R GRL EA+ V+ MP+E + VIW LLG+CR++ V++A+ L+ L +
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
L+P +P N+ +LSNIY W+ VA I+ M+ G +K G SS+E+ +
Sbjct: 513 LDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELED 562
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 170/417 (40%), Gaps = 94/417 (22%)
Query: 107 LKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNV 166
L C +N +++ LH +++ ++ + LI S + A +VF ++ E NV
Sbjct: 26 LPKCANLNQVKQ---LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 167 VVWTSMINGYISCGDIVSARCLF------------------------------------- 189
+ S+I + A +F
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 190 --ELAPERDVILWNTIVSGY-----IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG 242
+L D+ + N ++ Y + VR +A KLF++M ++D +SWN+ML G G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVR---DAMKLFEKMSERDTVSWNSMLGGLVKAG 199
Query: 243 DVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
++ + +RLF+EMP+R++ SWN ++ GYA + + F++M P T+
Sbjct: 200 ELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM-------PERNTV---- 248
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM--DTKD 360
W + ++ Y+K G +E A +F+ M K+
Sbjct: 249 ------------SW-----------------STMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
++TW II+G A G A L +M +G D I IL ACT GL+ G+
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR-IH 338
Query: 421 SMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
S+ ++ ++D+ A+ G L +A D +P + D V W +L V+
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVH 394
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 334/576 (57%), Gaps = 45/576 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITAC---AQLKQMTYARKMFDKITDQNVVSWN 69
+T + L I Q++ GL ++Y ++I C + + YA +F I + N++ WN
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
MF G+A + + + L+ M L +PN +TFP VLKSC K A +EG+++H VLK
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
G +++V T+LI +Y +E A+KVF + R+VV +T++I GY S G I +A+ LF
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVIS------------------- 230
+ P +DV+ WN ++SGY + N EA +LF M K +V
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 231 -------W-------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
W N ++ Y+ G++E LFE +P ++V SWN LIGGY
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE--YNGYQG 328
+ L+ E L F+ ML G PND T++++L ACA LGA+D +W+HVY + G
Sbjct: 344 HMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
+ +LIDMYAKCG IE A VFNS+ K L +WN +I G AMHGR + LF M+
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G PD ITF+G+L AC+H G+++ G F++M DY + P++EHYGCM+DLL +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
EA + + M +E D VIW +LL +C+++ NVEL E E L ++EP+NP ++V+LSNIY
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
GRW +VA+ + + D G KK+PGCSSIE++ VV
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 327/577 (56%), Gaps = 42/577 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRI--ITACAQLKQMTYARKMFDKITDQNVVS 67
E+ + + L Q ++ +G Y ++ + A + + YARK+FD+I N +
Sbjct: 38 ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFA 97
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLV 126
WN + YA + F M + PN +TFP ++K+ ++++L G+ LH +
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
+K+ +++FV +LI Y + +++A KVF + E++VV W SMING++ G A
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 187 CLFELAPERDV---------------------------------------ILWNTIVSGY 207
LF+ DV L N ++ Y
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ +A++LFD M +KD ++W TML GYA + D E + + MP++++ +WN LI
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
Y NG E L F + + + N T+V+ LSACA++GAL+ +W+H Y + +G +
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N V +ALI MY+KCG +E + +VFNS++ +D+ W+ +I GLAMHG G A+ +F++M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ A P+G+TF + CAC+H GLV+E S F M +Y IVP+ +HY C+VD+L R+G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L +AV F++ MPI +W LLG+C+++ N+ LAE+A RL ELEP+N V+LSNI
Sbjct: 518 LEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNI 577
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
Y LG+W++V+ ++ MR TG KK PGCSSIE++ ++
Sbjct: 578 YAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
LS +A+ +E +++F+E+P+ N F+WN LI YA+ + AF M++E + +PN
Sbjct: 74 LSSFAS---LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
T ++ A A + +L + +H A + +V V N+LI Y CG +++A VF
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
++ KD+++WN++I+G G AL LF +M++ +T +G+L AC + +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 415 G---LSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
G SY + ++ ++ M+D+ + G + +A M E D V W +L
Sbjct: 251 GRQVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 305
Query: 472 GSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKK 531
Y E E A E L + K+ + L + Y G+ + + F +
Sbjct: 306 DG---YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV--------FHE 354
Query: 532 LPGCSSIEVNEVVMLGCLS 550
L ++++N++ ++ LS
Sbjct: 355 LQLQKNMKLNQITLVSTLS 373
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/526 (37%), Positives = 314/526 (59%), Gaps = 6/526 (1%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARK-MFDKITDQNVVSWNAMFNGY 75
HL+QI +++ GLE+ + I++ + +F+++ WN + GY
Sbjct: 25 HLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGY 84
Query: 76 AQN-EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+ F TV +L M+ A P+ +TFP+V+K C +R G +H LVL+ GF +
Sbjct: 85 SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKD 144
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
+ VGT+ ++ Y K + +A KVFGEM ERN V WT+++ Y+ G++ A+ +F+L PE
Sbjct: 145 VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE 204
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEM 254
R++ WN +V G + +++ A+KLFD+MPK+D+IS+ +M+ GYA GD+ + LFEE
Sbjct: 205 RNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEA 264
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS 314
+V +W+ LI GYA NG E F M + V P++ +V ++SAC+++G +
Sbjct: 265 RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELC 323
Query: 315 KWV--HVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ V +++ N + + V ALIDM AKCG ++ A +F M +DL+++ +++ G+A
Sbjct: 324 EKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMA 382
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
+HG G+ A+ LF +M + G +PD + F IL C LVEEGL YF+ M YSI+
Sbjct: 383 IHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASP 442
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY C+V+LL+R G+L EA + +K MP EA A W +LLG C ++ N E+AE+ L E
Sbjct: 443 DHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE 502
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
LEP++ ++V+LSNIY L RW DVA ++ M + G K+ G S I
Sbjct: 503 LEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/503 (39%), Positives = 296/503 (58%), Gaps = 11/503 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMP- 98
+++ AQ + AR +FD++ ++N VSWNA+ + Y QN +LF + +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 99 NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF 158
NC +L VK + E + + ++ +I Y+ I+ A ++F
Sbjct: 223 NC-----LLGGFVKKKKIVEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 159 GEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARK 218
E ++V WT+M++GYI + AR LF+ PER+ + WN +++GY+ M A++
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
LFD MP ++V +WNTM++GYA G + E K LF++MP+R+ SW +I GY+ +G FE
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
L F +M EG N ++ + LS CA + AL+ K +H GY+ VGNAL+
Sbjct: 394 LRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG IE A D+F M KD+++WNT+I+G + HG G AL F MK G PD T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
+ +L AC+H GLV++G YF +M DY ++P +HY CMVDLL RAG L +A + +K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P E DA IW LLG+ RV+ N ELAE A +++ +EP+N +V+LSN+Y GRW DV
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
+++V MRD G KK+PG S IE+
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQ 655
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 228/485 (47%), Gaps = 32/485 (6%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
HS + T + + QT+ + + I++ + + A ++F ++ + VS
Sbjct: 38 HSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS 97
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
+N M +GY +N LF +M + D + ++ +++K V+ L + EL ++
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMP 153
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
+ ++ ++ Y+ ++ A VF M E+N V W ++++ Y+ + A
Sbjct: 154 ER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ ++ WN ++ G++ + ++EAR+ FD M +DV+SWNT+++GYA +G ++E
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
++LF+E P ++VF+W ++ GY N + E + F +M N+ + +L+ +
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-----NEVSWNAMLAGYVQ 324
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
++ +K + NV N +I YA+CG I A ++F+ M +D ++W +
Sbjct: 325 GERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+G + G AL LF +M+ G + +F L C + +E G +
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG------KQLHGR 434
Query: 428 IVPQIEHYGCMVD-----LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
+V GC V + + G + EA D K M + D V W ++ Y
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAG---YSRHGF 490
Query: 483 AELAL 487
E+AL
Sbjct: 491 GEVAL 495
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 112 KINAL-REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE-----AAYKVFGEMDERN 165
K AL R ++LH L NG + +S +A + + K + + +
Sbjct: 5 KFRALSRRAQQLHYTSL-NGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSD 63
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPK 225
+ W I+ Y+ G A +F+ P + +N ++SGY+ ARKLFD+MP+
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE 123
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
+D++SWN M+ GY N ++ + + LFE MPER+V SWN ++ GYA NG + F RM
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 286 LTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGI 345
+ ND + +LSA + ++ + + E + N L+ + K
Sbjct: 184 PEK-----NDVSWNALLSAYVQNSKMEEACMLFKSRE----NWALVSWNCLLGGFVKKKK 234
Query: 346 IENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCA 405
I A F+SM+ +D+++WNTII+G A G+ A LF E + D T+ ++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSG 290
Query: 406 CTHMGLVEEGLSYFQSMAMD------------------------YSIVP--QIEHYGCMV 439
+VEE F M + ++P + + M+
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 440 DLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
A+ G+++EA + +MP + D V WA ++
Sbjct: 351 TGYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 52/303 (17%)
Query: 21 IQTQVVTSGLEKSDYITPR-------IITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
IQ ++V E D + R ++ Q ++M A+++FD + +NV +WN M
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 74 GYAQ--------NEFHR-----------------------TVVVLFTQMKKLDAMPNCFT 102
GYAQ N F + + LF QM++ N +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F L +C + AL G++LH ++K G+ FVG AL+ +Y +IE A +F EM
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFE------LAPERDVILWNTIVSGYIDVRNMIEA 216
+++V W +MI GY G A FE L P+ ++ ++S + +
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV--AVLSACSHTGLVDKG 529
Query: 217 RKLFDQMPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMP-ERNVFSWNGLIGGYA 270
R+ F M + + N+ M+ G +E+ L + MP E + W L+G
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 271 NNG 273
+G
Sbjct: 590 VHG 592
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T A LE K LH ++V G E ++ ++ + + A +F ++ +
Sbjct: 417 STCADVVALELGKQLH---GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE-L 122
++VSWN M GY+++ F + F MK+ P+ T VL +C + +G +
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 123 HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGD 181
+ + G N +++L +E A+ + M E + +W +++ G+
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 182 I----VSARCLFELAPE 194
+A +F + PE
Sbjct: 594 TELAETAADKIFAMEPE 610
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 314/602 (52%), Gaps = 78/602 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV----------- 65
++ + V+ SG +I R+I A ++ + R++FDK+ +N+
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 66 --------------------VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPI 105
+WN+M +G+AQ++ + F M K + N ++F
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 106 VLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN 165
VL +C +N + +G ++H L+ K+ F +++++G+AL+++YS + A +VF EM +RN
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 166 VVVWTSMINGYISCGDIVSARCLFELAPE------------------------------- 194
VV W S+I + G V A +F++ E
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 195 ---------RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
D+IL N V Y + EAR +FD MP ++VI+ +M+SGYA +
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ +F +M ERNV SWN LI GY NG E L F +L V P + +L AC
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKAC 396
Query: 306 ARLGALDFSKWVHVYAEYNGY------QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
A L L HV+ +G+ + ++ VGN+LIDMY KCG +E VF M +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D ++WN +I G A +G G AL LF EM +GE PD IT IG+L AC H G VEEG YF
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM D+ + P +HY CMVDLL RAG L EA ++ MP++ D+VIW +LL +C+V++N
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 480 VELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ L + E+L E+EP N +V+LSN+Y +LG+W+DV ++ +MR G K PGCS I+
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 540 VN 541
+
Sbjct: 637 IQ 638
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 219/496 (44%), Gaps = 96/496 (19%)
Query: 94 LDAMPNCFTFPIVLKSCVK--INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAI 151
L + + F +L SC+K ++A+ +H V+K+GF IF+ LI+ YS ++
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSL 71
Query: 152 EAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVR 211
E +VF +M +RN+ W S++ G G + A LF PERD WN++VSG+
Sbjct: 72 EDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 131
Query: 212 NMIEARKLFDQMPKK---------------------------------------DVISWN 232
EA F M K+ DV +
Sbjct: 132 RCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
++ Y+ G+V + +R+F+EM +RNV SWN LI + NG E LD F+ ML E RV
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML-ESRVE 250
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNG-YQGNVCVGNALIDMYAKCGIIENAVD 351
P++ T+ +V+SACA L A+ + VH N + ++ + NA +DMYAKC I+ A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 352 VFNSMDTKDLI-------------------------------TWNTIISGLAMHGRGAGA 380
+F+SM +++I +WN +I+G +G A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 381 LSLFHEMKNAGEMPDGITFIGILCAC-----------THMGLVEEGLSYFQSMAMDYSIV 429
LSLF +K P +F IL AC H+ +++ G FQS D V
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-FQSGEEDDIFV 429
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW-ANLLGSCRVYKNVELAELALE 488
++D+ + G + E ++M +E D V W A ++G + E EL E
Sbjct: 430 GN-----SLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 489 RLTELEPKNPANFVML 504
L E P + M+
Sbjct: 484 MLESGE--KPDHITMI 497
Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 281 AFKRMLTEGRVFPNDATIVTVLSAC--ARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+F ++ + F + + +L +C ++L A+ + ++VH +G+ + + N LID
Sbjct: 5 SFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAI-YVRYVHASVIKSGFSNEIFIQNRLID 63
Query: 339 MYAKCGIIENAVDVFN-------------------------------SMDTKDLITWNTI 367
Y+KCG +E+ VF+ SM +D TWN++
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
+SG A H R AL F M G + + +F +L AC+ + + +G+ S+
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ-VHSLIAKSP 182
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ + +VD+ ++ G + +A M + + V W +L+
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLI 225
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/533 (37%), Positives = 304/533 (57%), Gaps = 36/533 (6%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQL--KQMTYARKMFDKITDQNVVSWNAMFN 73
+ L QI + G++ Y T ++I CA + YAR++ + + +N +
Sbjct: 19 RALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 78
Query: 74 GYAQ-NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
GY++ +E H +V V M+K P+ F+F V+K+ +LR G ++HC LK+G
Sbjct: 79 GYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLE 138
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
+++FVGT LI +Y CG + AR +F+
Sbjct: 139 SHLFVGTTLIGMYG-------------------------------GCGCVEFARKVFDEM 167
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
+ +++ WN +++ ++ AR++FD+M ++ SWN ML+GY G++E KR+F
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
EMP R+ SW+ +I G A+NG F E F+ + G + PN+ ++ VLSAC++ G+ +
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG-MSPNEVSLTGVLSACSQSGSFE 286
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD-LITWNTIISGL 371
F K +H + E GY V V NALIDMY++CG + A VF M K +++W ++I+GL
Sbjct: 287 FGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGL 346
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
AMHG+G A+ LF+EM G PDGI+FI +L AC+H GL+EEG YF M Y I P+
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGCMVDL R+G+L +A DF+ +MPI A++W LLG+C + N+ELAE +RL
Sbjct: 407 IEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLN 466
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
EL+P N + V+LSN Y G+WKDVA I+ +M KK S +EV + +
Sbjct: 467 ELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTM 519
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/579 (35%), Positives = 325/579 (56%), Gaps = 45/579 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA--QLKQMTYARKMFDKITDQNVVS 67
E+ + HL QIQ Q++ +GL + + R+I CA + + + Y+ K+ I + N+ S
Sbjct: 61 EKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFS 120
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKK---LDAMPNCFTFPIVLKSCVKINALREGEELHC 124
WN G++++E + +L+ QM + ++ P+ FT+P++ K C + G +
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY-------- 176
VLK V A I ++++ +E A KVF E R++V W +INGY
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 177 ------------------------ISC---GDIVSARCLFELAPERDVILWNTIVSGYID 209
SC GD+ + +E E + + +V+ +D
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 210 V----RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
+ ++ EAR++FD + K+ ++SW TM+SGYA G ++ ++LF++M E++V WN +
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
IGG + L F+ M T P++ T++ LSAC++LGALD W+H Y E
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
NV +G +L+DMYAKCG I A+ VF+ + T++ +T+ II GLA+HG + A+S F+
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM +AG PD ITFIG+L AC H G+++ G YF M +++ PQ++HY MVDLL RA
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G L EA ++ MP+EADA +W LL CR++ NVEL E A ++L EL+P + +V+L
Sbjct: 540 GLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLD 599
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+YG+ W+D R + M + G +K+PGCSSIEVN +V
Sbjct: 600 GMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIV 638
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 319/562 (56%), Gaps = 42/562 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI +V G K ++ ++ A+ ++ ARK+FD+++++NVVSW +M GYA+ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 80 FHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
F + V LF +M + + PN T V+ +C K+ L GE+++ + +G N +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV- 197
+AL+++Y AI+ A ++F E N+ + +M + Y+ G A +F L + V
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 198 ------------------ILWNTIVSGYIDVRNMIE---------------------ARK 218
ILW GY+ +RN E A +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 219 LFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+FD+M K V++WN++++GY NG+V+ FE MPE+N+ SWN +I G LF E
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
++ F M ++ V + T++++ SAC LGALD +KW++ Y E NG Q +V +G L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
M+++CG E+A+ +FNS+ +D+ W I +AM G A+ LF +M G PDG+
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+G L AC+H GLV++G F SM + + P+ HYGCMVDLL RAG L EAV ++ M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
P+E + VIW +LL +CRV NVE+A A E++ L P+ ++V+LSN+Y GRW D+A
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 519 RIKVAMRDTGFKKLPGCSSIEV 540
+++++M++ G +K PG SSI++
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQI 715
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 269/617 (43%), Gaps = 68/617 (11%)
Query: 5 TGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQL---KQMTYARKMFDKIT 61
T + + +T L + GL+ +++ +L + +++A+++F+
Sbjct: 35 TPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSE 94
Query: 62 DQNVV-SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGE 120
+N++ GYA + ++LF +M P+ +TFP L +C K A G
Sbjct: 95 SYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 121 ELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
++H L++K G+ ++FV +L+ Y+ +++A KVF EM ERNVV WTSMI GY
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 181 DIVSARCLF-------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT 233
A LF E+ P ++ ++S + ++ K++ + + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMV--CVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 234 MLSG----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG 289
M+S Y ++ KRLF+E N+ N + Y GL E L F M+ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 290 RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQG--NVCVGNALIDMYAKC---- 343
V P+ ++++ +S+C++L + + K H Y NG++ N+C NALIDMY KC
Sbjct: 333 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALIDMYMKCHRQD 389
Query: 344 ----------------------GIIEN-----AVDVFNSMDTKDLITWNTIISGLAMHGR 376
G +EN A + F +M K++++WNTIISGL
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 377 GAGALSLFHEMKNA-GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHY 435
A+ +F M++ G DG+T + I AC H+G ++ + + + I +
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLG 508
Query: 436 GCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE--L 493
+VD+ +R G A+ + D W +G+ + N E A + + E L
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVMLGCLSREL 553
+P A FV G + I +M KL G S E V GC+ L
Sbjct: 568 KPDGVA-FVGALTACSHGGLVQQGKEIFYSML-----KLHGVSP----EDVHYGCMVDLL 617
Query: 554 DRKSIVRAEANMIKLLP 570
R ++ +I+ +P
Sbjct: 618 GRAGLLEEAVQLIEDMP 634
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/524 (37%), Positives = 302/524 (57%), Gaps = 7/524 (1%)
Query: 25 VVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQNEFHR 82
++ +E + I + + A + YARK+FD+ D + +S N+M Y + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 83 TVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTAL 141
L+ ++K P+ FTF + KSC + +G +LH + + GF A+++V T +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 142 IELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILW 200
+++Y+ + A F EM R+ V WT++I+GYI CG++ A LF+ P +DV+++
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIY 179
Query: 201 NTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVF 260
N ++ G++ +M AR+LFD+M K VI+W TM+ GY N D++ ++LF+ MPERN+
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
SWN +IGGY N E + F+ M + P+D TI++VL A + GAL +W H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGA 380
+ V V A++DMY+KCG IE A +F+ M K + +WN +I G A++G A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 381 LSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVD 440
L LF M E PD IT + ++ AC H GLVEEG +F M + + +IEHYGCMVD
Sbjct: 360 LDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVD 417
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPAN 500
LL RAG L EA D + MP E + +I ++ L +C YK++E AE L++ ELEP+N N
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 501 FVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
+V+L N+Y RW D +K MR KK GCS IE+N +V
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIV 521
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 171/378 (45%), Gaps = 82/378 (21%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ +Q+ G Y++ ++ A+ +M AR FD++ ++ VSW A+ +GY +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIR-- 156
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
L K D MP+ +K V NA+ +G +K+G
Sbjct: 157 ----CGELDLASKLFDQMPH-------VKDVVIYNAMMDG------FVKSG--------- 190
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVIL 199
+ +A ++F EM + V+ WT+MI+GY + DI +AR LF+ PER+++
Sbjct: 191 ----------DMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 200 WNTIVSGYIDVRNMIEARKLFDQMP----------------------------------- 224
WNT++ GY + E +LF +M
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 225 -----KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVL 279
K V +L Y+ G++E+ KR+F+EMPE+ V SWN +I GYA NG L
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 280 DAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALID 338
D F M+ E + P++ T++ V++AC G ++ KW HV E G + ++D
Sbjct: 361 DLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 339 MYAKCGIIENAVDVFNSM 356
+ + G ++ A D+ +M
Sbjct: 418 LLGRAGSLKEAEDLITNM 435
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 326/575 (56%), Gaps = 47/575 (8%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQ---MTYARKMFDKI--------T 61
+T+ ++QI +++ +G+ K+ +T RI+ A A ++ +AR +F +
Sbjct: 23 KTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGE 82
Query: 62 DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
++ WNA+ ++ + R ++L M + + F+ +VLK+C ++ ++ G +
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 122 LHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD 181
+H + K G +++F+ LI LY + + ++F M +R+ V + SMI+GY+ CG
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 182 IVSARCLFELAP----------------------------------ERDVILWNTIVSGY 207
IVSAR LF+L P E+D+I WN+++ GY
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 262
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
+ + +A+ LFD MP++DV++W TM+ GYA G V K LF++MP R+V ++N ++
Sbjct: 263 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY-AEYNGY 326
GY N E L+ F M E + P+D T+V VL A A+LG L + +H+Y E Y
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY 382
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHE 386
G +G ALIDMY+KCG I++A+ VF ++ K + WN +I GLA+HG G A + +
Sbjct: 383 LGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 441
Query: 387 MKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG 446
++ PD ITF+G+L AC+H GLV+EGL F+ M + I P+++HYGCMVD+L+R+G
Sbjct: 442 IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 501
Query: 447 RLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSN 506
+ A + ++ MP+E + VIW L +C +K E EL + L NP+++V+LSN
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 507 IYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+Y G WKDV R++ M++ +K+PGCS IE++
Sbjct: 562 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 290/473 (61%), Gaps = 41/473 (8%)
Query: 112 KINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
++ + E ++++ ++ +G + F+ T +++ + ++ A ++F ++ NV ++ S
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 172 MINGYI---------------------------------SCGDIVSARC-------LFEL 191
+I Y SC + S L +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
P V+ N ++ Y+ ++++A K+FD+M ++DVISWN++LSGYA G +++ K LF
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
M ++ + SW +I GY G + E +D F+ M G + P++ ++++VL +CA+LG+L
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISLISVLPSCAQLGSL 257
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
+ KW+H+YAE G+ V NALI+MY+KCG+I A+ +F M+ KD+I+W+T+ISG
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A HG GA+ F+EM+ A P+GITF+G+L AC+H+G+ +EGL YF M DY I P+
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
IEHYGC++D+LARAG+L AV+ K MP++ D+ IW +LL SCR N+++A +A++ L
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
ELEP++ N+V+L+NIY DLG+W+DV+R++ +R+ KK PG S IEVN +V
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIV 490
Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 202/408 (49%), Gaps = 43/408 (10%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+++++ +I ++ GL +S ++ +++ C +++ M YA ++F+++++ NV +N
Sbjct: 18 QRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYN 77
Query: 70 AMFNGYAQNEFHRTVVVLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLK 128
++ Y N + V+ ++ Q+ +K +P+ FTFP + KSC + + G+++H + K
Sbjct: 78 SIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK 137
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
G R ++ ALI++Y + A+KVF EM ER+V+ W S+++GY G + A+ L
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 189 FELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVIS-------------- 230
F L ++ ++ W ++SGY + +EA F +M + D IS
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 231 ----W-----------------NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGY 269
W N ++ Y+ G + + +LF +M ++V SW+ +I GY
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 270 ANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQG 328
A +G ++ F M +V PN T + +LSAC+ +G ++ + + +
Sbjct: 318 AYHGNAHGAIETFNEM-QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 329 NVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHG 375
+ LID+ A+ G +E AV++ +M K D W +++S G
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPG 424
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 317/571 (55%), Gaps = 43/571 (7%)
Query: 13 ETTKHLHQIQTQVVTSGLEKSDYITPRI-ITACAQLK-QMTYARKMFDKITDQNVVSWNA 70
+TT Q+ +Q +T G+ + ++ + C++L ++YA K+F KI + +VV WN
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNN 104
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKN 129
M G+++ + V L+ M K P+ TFP +L + AL G++LHC V+K
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGD-------- 181
G +N++V AL+++YS ++ A VF + +V W MI+GY +
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 182 ----------------IVSARC---------------LFELAPERDVILWNTIVSGYIDV 210
+V + C + E E + L N +V+ Y
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 211 RNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA 270
M A ++F M +DVISW +++ GY G+++ + F++MP R+ SW +I GY
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 271 NNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNV 330
G F E L+ F+ M + G + P++ T+V+VL+ACA LG+L+ +W+ Y + N + +V
Sbjct: 345 RAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
VGNALIDMY KCG E A VF+ MD +D TW ++ GLA +G+G A+ +F +M++
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
PD IT++G+L AC H G+V++ +F M D+ I P + HYGCMVD+L RAG + E
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A + +++MP+ ++++W LLG+ R++ + +AELA +++ ELEP N A + +L NIY
Sbjct: 524 AYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAG 583
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
RWKD+ ++ + D KK PG S IEVN
Sbjct: 584 CKRWKDLREVRRKIVDVAIKKTPGFSLIEVN 614
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 308/538 (57%), Gaps = 56/538 (10%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACA----QLKQMTYARKMFDKITDQNVVSWN 69
T + L QI + SG + I+ CA + + YA K+F+++ +N SWN
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 70 AMFNGYAQNEFHRTVV--VLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLV 126
+ G+++++ + ++ LF +M + + PN FTFP VLK+C K ++EG+++H L
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSAR 186
LK GF + FV + L+ +Y + CG + AR
Sbjct: 155 LKYGFGGDEFVMSNLVRMY-------------------------------VMCGFMKDAR 183
Query: 187 CLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEE 246
LF +++I + +V M + RK +++ WN M+ GY GD +
Sbjct: 184 VLFY----KNIIEKDMVV--------MTDRRK-----RDGEIVLWNVMIDGYMRLGDCKA 226
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+ LF++M +R+V SWN +I GY+ NG F + ++ F+ M +G + PN T+V+VL A +
Sbjct: 227 ARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAIS 285
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
RLG+L+ +W+H+YAE +G + + +G+ALIDMY+KCGIIE A+ VF + +++ITW+
Sbjct: 286 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+I+G A+HG+ A+ F +M+ AG P + +I +L AC+H GLVEEG YF M
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ P+IEHYGCMVDLL R+G L EA +F+ MPI+ D VIW LLG+CR+ NVE+ +
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ++ P + +V LSN+Y G W +V+ +++ M++ +K PGCS I+++ V+
Sbjct: 466 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVL 523
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 361 bits (927), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 322/557 (57%), Gaps = 26/557 (4%)
Query: 5 TGAHSEQ-----LETTKH---LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKM 56
+G HS+ +++ H L QI +++ GL+ S ++ ++I A + +T+AR++
Sbjct: 16 SGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
FD + + WNA+ GY++N + +++++ M+ P+ FTFP +LK+C ++ L
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG--EMDERNVVVWTSMIN 174
+ G +H V + GF A++FV LI LY+ + + +A VF + ER +V WT++++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVS 195
Query: 175 GYISCGDIVSARCLFELAPERDVIL-WNTIVS---GYIDVRNMIEARKLFDQMPKKDV-- 228
Y G+ + A +F + DV W +VS + ++++ + R + + K +
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 229 -----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK 283
IS NTM YA G V K LF++M N+ WN +I GYA NG E +D F
Sbjct: 256 EPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 284 RMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKC 343
M+ + V P+ +I + +SACA++G+L+ ++ ++ Y + Y+ +V + +ALIDM+AKC
Sbjct: 313 EMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 344 GIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL 403
G +E A VF+ +D++ W+ +I G +HGR A+SL+ M+ G P+ +TF+G+L
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
AC H G+V EG +F MA D+ I PQ +HY C++DLL RAG L +A + +K MP++
Sbjct: 432 MACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 464 AVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVA 523
+W LL +C+ +++VEL E A ++L ++P N ++V LSN+Y W VA ++V
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 524 MRDTGFKKLPGCSSIEV 540
M++ G K GCS +EV
Sbjct: 551 MKEKGLNKDVGCSWVEV 567
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 358 bits (919), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 302/534 (56%), Gaps = 35/534 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+Q T K L ++ + L + + + ITAC K++ A ++ + NV +N
Sbjct: 36 KQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYN 95
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
A+F G+ + L+ +M + P+ +T+ ++K+ A R GE L + K
Sbjct: 96 ALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKF 153
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF ++ + T LI+ YS + G I AR +F
Sbjct: 154 GFGFHVKIQTTLIDFYS-------------------------------ATGRIREARKVF 182
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
+ PERD I W T+VS Y V +M A L +QM +K+ + N +++GY G++E+ +
Sbjct: 183 DEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAES 242
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF +MP +++ SW +I GY+ N + E + F +M+ EG + P++ T+ TV+SACA LG
Sbjct: 243 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG-IIPDEVTMSTVISACAHLG 301
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
L+ K VH+Y NG+ +V +G+AL+DMY+KCG +E A+ VF ++ K+L WN+II
Sbjct: 302 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 361
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GLA HG AL +F +M+ P+ +TF+ + ACTH GLV+EG ++SM DYSIV
Sbjct: 362 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 421
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
+EHYG MV L ++AG + EA++ + M E +AVIW LL CR++KN+ +AE+A +
Sbjct: 422 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 481
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL-PGCSSIEVNE 542
L LEP N + +L ++Y + RW+DVA I+ MR+ G +K+ PG SSI +++
Sbjct: 482 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDK 535
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 357 bits (917), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 292/520 (56%), Gaps = 34/520 (6%)
Query: 9 SEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACA---QLKQMTYARKMFDKITDQNV 65
+E+ ++ + Q ++ +GL + +++ A + K ++YA + ++I N
Sbjct: 46 TERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNG 105
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+ N++ YA + + +F +M P+ ++F VLK+C EG ++H L
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
+K+G ++FV L+ +Y E A KV M
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM------------------------ 201
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
P RD + WN+++S Y++ + EAR LFD+M +++V SWN M+SGYA G V+
Sbjct: 202 -------PVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVK 254
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
E K +F+ MP R+V SWN ++ YA+ G + EVL+ F +ML + P+ T+V+VLSAC
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LG+L +WVHVY + +G + + AL+DMY+KCG I+ A++VF + +D+ TWN
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWN 374
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
+IIS L++HG G AL +F EM G P+GITFIG+L AC H+G++++ F+ M+
Sbjct: 375 SIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y + P IEHYGCMVDLL R G++ EA + V +P + +++ +LLG+C+ + +E AE
Sbjct: 435 YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAER 494
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMR 525
RL EL ++ + + +SN+Y GRW+ V + MR
Sbjct: 495 IANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 310/560 (55%), Gaps = 42/560 (7%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRII--TACAQLKQMTYARKMFDKITDQNVVS 67
+ + + L QI +V +GL + + +I + + + YA K+FD+I +V
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
N + G AQ+ V L+T+M+K P+ +TF VLK+C K+ G H V+
Sbjct: 80 CNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVV 139
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
++GF N +V ALI ++ +CGD+ A
Sbjct: 140 RHGFVLNEYVKNALILFHA-------------------------------NCGDLGIASE 168
Query: 188 LFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEEC 247
LF+ + + + W+++ SGY + EA +LFD+MP KD ++WN M++G +++
Sbjct: 169 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA 228
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
+ LF+ E++V +WN +I GY N G E L FK M G P+ TI+++LSACA
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE-HPDVVTILSLLSACAV 287
Query: 308 LGALDFSKWVHVYA-EYNGYQGNVCVG----NALIDMYAKCGIIENAVDVFNSMDTKDLI 362
LG L+ K +H+Y E ++ VG NALIDMYAKCG I+ A++VF + +DL
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TWNT+I GLA+H G++ +F EM+ P+ +TFIG++ AC+H G V+EG YF M
Sbjct: 348 TWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y+I P I+HYGCMVD+L RAG+L EA FV+ M IE +A++W LLG+C++Y NVEL
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+ A E+L + ++V+LSNIY G+W V +++ DT KK G S IE ++
Sbjct: 467 GKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Query: 543 --VVMLGCLSRELDRKSIVR 560
++M LS E + +S R
Sbjct: 527 DKLMMRYLLSSEPESRSRGR 546
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 6 GAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRI-----------------ITACAQLK 48
G SE + + H++ +TSG K I + IT C + K
Sbjct: 164 GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCK 223
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
+M AR++FD+ T+++VV+WNAM +GY + + + +F +M+ P+ T +L
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 109 SCVKINALREGEELHCLVLKNG-FRANIFVGT----ALIELYSTGKAIEAAYKVFGEMDE 163
+C + L G+ LH +L+ ++I+VGT ALI++Y+ +I+ A +VF + +
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 164 RNVVVWTSMINGYISCGDIVSARCLFELAPE-RDVILWNTIV-----------SGYIDVR 211
R++ W ++I G + A E+ E + + +W V SG +D
Sbjct: 344 RDLSTWNTLIVGLA----LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD-- 397
Query: 212 NMIEARKLFDQMP-----KKDVISWNTMLSGYANNGDVEECKRLFEEMP-ERNVFSWNGL 265
E RK F M + ++ + M+ G +EE E M E N W L
Sbjct: 398 ---EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 454
Query: 266 IGG 268
+G
Sbjct: 455 LGA 457
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 303/535 (56%), Gaps = 9/535 (1%)
Query: 14 TTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFN 73
T HL QI ++ L ++ ++ +Q Y+ +F N+ +N++ N
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
G+ N + LF ++K + FTFP+VLK+C + ++ + G +LH LV+K GF
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---- 189
++ T+L+ +YS + A+K+F E+ +R+VV WT++ +GY + G A LF
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEAR---KLFDQMP-KKDVISWNTMLSGYANNGDVE 245
E+ + D ++S + V ++ K ++M +K+ T+++ YA G +E
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ + +F+ M E+++ +W+ +I GYA+N E ++ F +ML E + P+ +IV LS+C
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIVGFLSSC 323
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
A LGALD +W + + + N+ + NALIDMYAKCG + +VF M KD++ N
Sbjct: 324 ASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMN 383
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
ISGLA +G + ++F + + G PDG TF+G+LC C H GL+++GL +F +++
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
Y++ +EHYGCMVDL RAG L +A + MP+ +A++W LL CR+ K+ +LAE
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 486 ALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
L+ L LEP N N+V LSNIY GRW + A ++ M G KK+PG S IE+
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIEL 558
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 274/482 (56%), Gaps = 11/482 (2%)
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN A + L+ M + + P+ F+FP +LKSC ++ G++LHC V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERN--VVVWTSMINGYISCGDIVSA 185
K G FV TALI +Y + A KVF E + + V + ++I+GY + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIE----ARKLFDQMPK----KDVISWNTMLSG 237
+F E V + + + G + + + E R L Q K +V N+ ++
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G VE +RLF+EMP + + +WN +I GY+ NGL ++VL+ +++M + G V P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCPDPFT 259
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
+V+VLS+CA LGA V E NG+ NV V NA I MYA+CG + A VF+ M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K L++W +I MHG G L LF +M G PDG F+ +L AC+H GL ++GL
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
F++M +Y + P EHY C+VDLL RAGRL EA++F++ MP+E D +W LLG+C+++
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
KNV++AELA ++ E EP N +V++SNIY D + + RI+V MR+ F+K PG S
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 538 IE 539
+E
Sbjct: 500 VE 501
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 21/372 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYA 76
Q+ V G E ++ +I+ + + ARK+F++ + Q V +NA+ +GY
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIF 136
N +F +MK+ + T ++ C L G LH +K G + +
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 137 VGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERD 196
V + I +Y ++EA ++F EM + ++ W ++I+GY G L+E
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPK--------KDVISWNTMLSGYANNGDVEECK 248
V + + + A+K+ ++ K +V N +S YA G++ + +
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKAR 312
Query: 249 RLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARL 308
+F+ MP +++ SW +IG Y +G+ L F M+ G + P+ A V VLSAC+
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-IRPDGAVFVMVLSACSHS 371
Query: 309 GALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLI 362
G D F Y G + C L+D+ + G ++ A++ SM + D
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSC----LVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 363 TWNTIISGLAMH 374
W ++ +H
Sbjct: 428 VWGALLGACKIH 439
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 309/544 (56%), Gaps = 13/544 (2%)
Query: 9 SEQLETTKHLH---QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNV 65
S+ + + +H Q+ ++ SG + + + ++ + +++ ARK+FD++T+++V
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 66 VSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCL 125
+SWN++ NGY N + +F QM + T V C + G +H +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 126 VLKNGF-RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
+K F R + F T L+++YS +++A VF EM +R+VV +TSMI GY G
Sbjct: 322 GVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 185 ARCLFELAPER----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKD----VISWNTMLS 236
A LFE E DV +++ R + E +++ + + + D + N ++
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 237 GYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDA 296
YA G ++E + +F EM +++ SWN +IGGY+ N E L F +L E R P++
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 297 TIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
T+ VL ACA L A D + +H Y NGY + V N+L+DMYAKCG + A +F+ +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 357 DTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL 416
+KDL++W +I+G MHG G A++LF++M+ AG D I+F+ +L AC+H GLV+EG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 417 SYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRV 476
+F M + I P +EHY C+VD+LAR G L +A F++ MPI DA IW LL CR+
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 477 YKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCS 536
+ +V+LAE E++ ELEP+N +V+++NIY + +W+ V R++ + G +K PGCS
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 537 SIEV 540
IE+
Sbjct: 741 WIEI 744
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 210/417 (50%), Gaps = 16/417 (3%)
Query: 42 TACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCF 101
T C LK+ A ++FD++ + + WN + N A++ + LF +M + +
Sbjct: 140 TNCGDLKE---ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 102 TFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEM 161
TF V KS + ++ GE+LH +LK+GF VG +L+ Y + +++A KVF EM
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 162 DERNVVVWTSMINGYISCGDIVSARCLFEL----APERDVILWNTIVSGYIDVRNMIEAR 217
ER+V+ W S+INGY+S G +F E D+ ++ +G D R +I
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR-LISLG 315
Query: 218 KLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ + K S NT+L Y+ GD++ K +F EM +R+V S+ +I GYA
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
GL E + F+ M EG + P+ T+ VL+ CAR LD K VH + + N ++ V
Sbjct: 376 GLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
NAL+DMYAKCG ++ A VF+ M KD+I+WNTII G + + ALSLF+ +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 393 M-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
PD T +L AC + ++G M +VD+ A+ G L
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 202/479 (42%), Gaps = 87/479 (18%)
Query: 58 DKIT--DQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINA 115
D IT D++V N + ++ V L K D P T VL+ C +
Sbjct: 52 DSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKS 109
Query: 116 LREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMING 175
L++G+E+ + NGF + +G+ L +Y+ ++ A +VF E+ + W ++N
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 176 YISCGDIVSARCLFE--------------------LAPERDV------------------ 197
GD + LF+ + R V
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 198 -ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ N++V+ Y+ + + ARK+FD+M ++DVISWN++++GY +NG E+
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG--------- 280
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
L F +ML G + + ATIV+V + CA + +
Sbjct: 281 ----------------------LSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRA 317
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH + N L+DMY+KCG +++A VF M + ++++ ++I+G A G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGL---SYFQSMAMDYSIVPQIE 433
A+ LF EM+ G PD T +L C L++EG + + + + I
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS-- 435
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG----SCRVYKNVELAELALE 488
++D+ A+ G + EA M ++ D + W ++G +C + + L L LE
Sbjct: 436 --NALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLE 491
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 291/514 (56%), Gaps = 18/514 (3%)
Query: 33 SDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMK 92
S YI R+I AR +F+ + ++NVVSW AM GY Q LF +M
Sbjct: 87 SGYIKNRMIVE---------ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 93 KLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIE 152
+ N ++ ++ + + + +L+ ++ ++ T +I ++
Sbjct: 138 E----RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVD 189
Query: 153 AAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRN 212
A +F EM ERNVV WT+MI GY + AR LFE+ PE+ + W +++ GY
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 213 MIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ +A + F+ MP K VI+ N M+ G+ G++ + +R+F+ M +R+ +W G+I Y
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERK 309
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G E LD F +M +G V P+ +++++LS CA L +L + + VH + + +V V
Sbjct: 310 GFELEALDLFAQMQKQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
+ L+ MY KCG + A VF+ +KD+I WN+IISG A HG G AL +FHEM ++G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 393 MPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAV 452
MP+ +T I IL AC++ G +EEGL F+SM + + P +EHY C VD+L RAG++ +A+
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 453 DFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLG 512
+ ++ M I+ DA +W LLG+C+ + ++LAE+A ++L E EP N +V+LS+I
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRS 548
Query: 513 RWKDVARIKVAMRDTGFKKLPGCSSIEVNEVVML 546
+W DVA ++ MR K PGCS IEV + V +
Sbjct: 549 KWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHM 582
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 164/377 (43%), Gaps = 52/377 (13%)
Query: 41 ITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNC 100
I+ +++ ++ ARK FD + + + SWN++ +GY N + LF +M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE------- 76
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGE 160
N+ L+ Y + I A VF
Sbjct: 77 --------------------------------RNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 161 MDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLF 220
M ERNVV WT+M+ GY+ G + A LF PER+ + W + G ID + +ARKL+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 221 DQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLD 280
D MP KDV++ M+ G G V+E + +F+EM ERNV +W +I GY N +D
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNR----VD 220
Query: 281 AFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY--QGNVCVGNALID 338
+++ V P T +S + L S + E+ V NA+I
Sbjct: 221 VARKLF---EVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
+ + G I A VF+ M+ +D TW +I G AL LF +M+ G P +
Sbjct: 274 GFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS 333
Query: 399 FIGILCACTHMGLVEEG 415
I IL C + ++ G
Sbjct: 334 LISILSVCATLASLQYG 350
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 45/281 (16%)
Query: 144 LYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTI 203
L GK I A K F + + + W S+++GY S G AR LF+ ER+V+ WN +
Sbjct: 27 LSRIGK-INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGL 85
Query: 204 VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWN 263
VSGYI R ++EAR +F+ MP+++V+SW M+ GY G V E + LF MPERN SW
Sbjct: 86 VSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWT 145
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEY 323
+ GG ++G + + R + + V+++ +G L
Sbjct: 146 VMFGGLIDDG-----------RIDKARKLYDMMPVKDVVASTNMIGGL------------ 182
Query: 324 NGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSL 383
+ G ++ A +F+ M ++++TW T+I+G + R A L
Sbjct: 183 -----------------CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 384 FHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAM 424
F M E +++ +L T G +E+ +F+ M M
Sbjct: 226 FEVMPEKTE----VSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 94/258 (36%), Gaps = 50/258 (19%)
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPN 294
+S + G + E ++ F+ + + + SWN ++ GY +NGL E F M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 295 DATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN 354
+ NV N L+ Y K +I A +VF
Sbjct: 75 -------------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 355 SMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEE 414
M +++++W ++ G G A SLF M E+ + F GL+++
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---------GGLIDD 154
Query: 415 GLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
G D V + M+ L R GR+ EA M E + V W ++
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGY 213
Query: 475 RVYKNVELAELALERLTE 492
R V++A E + E
Sbjct: 214 RQNNRVDVARKLFEVMPE 231
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 18/195 (9%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + ++ Q+ +V + Y+ ++T + ++ A+ +FD+ + ++++ WN++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+GYA + + +F +M MPN T +L +C L EG E+ +
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM----- 458
Query: 132 RANIFVGTALIELYST-----GKA--IEAAYKVFGEMD-ERNVVVWTSMINGYISCGDI- 182
+ F T +E YS G+A ++ A ++ M + + VW +++ + +
Sbjct: 459 -ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Query: 183 ---VSARCLFELAPE 194
V+A+ LFE P+
Sbjct: 518 LAEVAAKKLFENEPD 532
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 292/542 (53%), Gaps = 71/542 (13%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
H L+T K H ++ +GL + + + I AC+ + YA +F N
Sbjct: 24 HGNNLKTLKQSH---CYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYL 80
Query: 68 WNAMFNGYA---QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
N M + + H + ++ ++ L A P+ FTFP VLK V+++ + G ++H
Sbjct: 81 HNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHG 140
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+ GF +++ V T LI++ Y SCG
Sbjct: 141 QVVVFGFDSSVHVVTGLIQM-------------------------------YFSCG---- 165
Query: 185 ARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+ +ARK+FD+M KDV WN +L+GY G++
Sbjct: 166 ---------------------------GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 245 EECKRLFEEMP--ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVL 302
+E + L E MP RN SW +I GYA +G E ++ F+RML E V P++ T++ VL
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN-VEPDEVTLLAVL 257
Query: 303 SACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLI 362
SACA LG+L+ + + Y ++ G V + NA+IDMYAK G I A+DVF ++ ++++
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 363 TWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM 422
TW TII+GLA HG GA AL++F+ M AG P+ +TFI IL AC+H+G V+ G F SM
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 423 AMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVEL 482
Y I P IEHYGCM+DLL RAG+L EA + +K MP +A+A IW +LL + V+ ++EL
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 483 AELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
E AL L +LEP N N+++L+N+Y +LGRW + ++ M+ G KK+ G SSIEV
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 543 VV 544
V
Sbjct: 498 RV 499
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 348 bits (893), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 294/535 (54%), Gaps = 69/535 (12%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACA-QLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
HL Q+Q+ ++ SGL S ++ +++ C +L ++YAR +FD+ + N + A+ Y
Sbjct: 39 HLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY 98
Query: 76 AQN-EFHRTVVVLFTQM--KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFR 132
+ + H + F ++ + PN F +P+VLKS +++ +H + K+GF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF- 157
Query: 133 ANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELA 192
LY VVV T++++ Y S
Sbjct: 158 ----------HLY--------------------VVVQTALLHSYAS-------------- 173
Query: 193 PERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
V ++ AR+LFD+M +++V+SW MLSGYA +GD+ LFE
Sbjct: 174 ----------------SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+MPER+V SWN ++ NGLF E + F+RM+ E + PN+ T+V VLSACA+ G L
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQ 277
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+K +H +A +V V N+L+D+Y KCG +E A VF K L WN++I+ A
Sbjct: 278 LAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 373 MHGRGAGALSLFHEMK--NAGEM-PDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+HGR A+++F EM N ++ PD ITFIG+L ACTH GLV +G YF M + I
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+IEHYGC++DLL RAGR EA++ + M ++AD IW +LL +C+++ +++LAE+A++
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
L L P N M++N+YG++G W++ R + ++ K PG S IE+ NEV
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEV 512
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 299/503 (59%), Gaps = 17/503 (3%)
Query: 56 MFDKITDQ-NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN 114
+F++ D+ +V SWN++ A++ ++ F+ M+KL P +FP +K+C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 115 ALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMIN 174
+ G++ H G++++IFV +ALI +YST +E A KVF E+ +RN+V WTSMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 175 GYISCGDIVSARCLFE--LAPERD----VILWNTIVSGYIDVRNMIEARKLFDQMPK--- 225
GY G+ + A LF+ L E D + L + + I + + A+ L + +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 226 -----KDVISWNTMLSGYANNGD--VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+ V NT+L YA G+ V +++F+++ +++ S+N ++ YA +G+ E
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALID 338
+ F+R++ V N T+ TVL A + GAL K +H G + +V VG ++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 339 MYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGIT 398
MY KCG +E A F+ M K++ +W +I+G MHG A AL LF M ++G P+ IT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 399 FIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
F+ +L AC+H GL EG +F +M + + P +EHYGCMVDLL RAG L +A D ++RM
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 459 PIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVA 518
++ D++IW++LL +CR++KNVELAE+++ RL EL+ N +++LS+IY D GRWKDV
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 519 RIKVAMRDTGFKKLPGCSSIEVN 541
R+++ M++ G K PG S +E+N
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELN 533
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 176/379 (46%), Gaps = 30/379 (7%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q Q G + +++ +I + ++ ARK+FD+I +N+VSW +M GY N
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 80 FHRTVVVLFTQM-----KKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
V LF + DAM + V+ +C ++ A E +H V+K GF
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 134 NIFVGTALIELYSTG--KAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFEL 191
+ VG L++ Y+ G + A K+F ++ +++ V + S+++ Y G A +F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 192 APERDVILWNTIV----------SGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSG 237
+ V+ +N I SG + + I DQ+ + DVI +++
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH-----DQVIRMGLEDDVIVGTSIIDM 331
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y G VE ++ F+ M +NV SW +I GY +G + L+ F M+ G V PN T
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYIT 390
Query: 298 IVTVLSACARLG-ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSM 356
V+VL+AC+ G ++ +W + G + + ++D+ + G ++ A D+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 357 DTK-DLITWNTIISGLAMH 374
K D I W+++++ +H
Sbjct: 451 KMKPDSIIWSSLLAACRIH 469
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 7 AHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVV 66
+HS L K +H QV+ GLE + II + ++ ARK FD++ ++NV
Sbjct: 298 SHSGALRIGKCIHD---QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
Query: 67 SWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREG-EELHCL 125
SW AM GY + + LF M PN TF VL +C EG + +
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM 414
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER-NVVVWTSM-----INGYISC 179
+ G + +++L ++ AY + M + + ++W+S+ I+ +
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVEL 474
Query: 180 GDIVSARCLFEL 191
+I AR LFEL
Sbjct: 475 AEISVAR-LFEL 485
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 294/535 (54%), Gaps = 38/535 (7%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ L + ++++ L + + +++ A A LK + ARK+FD+I ++NV+ N M Y
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
N F+ V +F M + P+ +TFP VLK+C + G ++H K G + +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER 195
FVG L+ +Y GK CG + AR + + R
Sbjct: 176 FVGNGLVSMY--GK-----------------------------CGFLSEARLVLDEMSRR 204
Query: 196 DVILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNG--DVEECKR 249
DV+ WN++V GY + +A ++ +M D + ++L +N +V K
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKD 264
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F +M ++++ SWN +IG Y N + E ++ + RM +G P+ +I +VL AC
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGDTS 323
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL K +H Y E N+ + NALIDMYAKCG +E A DVF +M ++D+++W +IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
GRG A++LF +++++G +PD I F+ L AC+H GL+EEG S F+ M Y I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P++EH CMVDLL RAG++ EA F++ M +E + +W LLG+CRV+ + ++ LA ++
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +L P+ +V+LSNIY GRW++V I+ M+ G KK PG S++EVN ++
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 298/516 (57%), Gaps = 13/516 (2%)
Query: 49 QMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLK 108
++ ARK+FD + ++NVVSW A+ GY N LF +M + N ++ ++L
Sbjct: 94 EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLI 149
Query: 109 SCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVV 168
++ + + +L+ ++ + NI + + L G+ ++ A ++F EM ER+V+
Sbjct: 150 GFLQDGRIDDACKLYEMIPD---KDNIARTSMIHGLCKEGR-VDEAREIFDEMSERSVIT 205
Query: 169 WTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDV 228
WT+M+ GY + AR +F++ PE+ + W +++ GY+ + +A +LF+ MP K V
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
I+ N M+SG G++ + +R+F+ M ERN SW +I + NG E LD F M +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G V P T++++LS CA L +L K VH + +V V + L+ MY KCG +
Sbjct: 326 G-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACT 407
+ +F+ +KD+I WN+IISG A HG G AL +F EM +G P+ +TF+ L AC+
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
+ G+VEEGL ++SM + + P HY CMVD+L RAGR EA++ + M +E DA +W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
+LLG+CR + +++AE ++L E+EP+N +++LSN+Y GRW DVA ++ M+
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 528 GFKKLPGCSSIEVNEVV---MLGCLSRELDRKSIVR 560
+K PGCS EV V G ++ +++SI++
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILK 600
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 37/367 (10%)
Query: 154 AYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNM 213
A K+F EM +RN++ W +++GY+ G+I AR +F+L PER+V+ W +V GY+ +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 214 IEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNG 273
A LF +MP+K+ +SW ML G+ +G +++ +L+E +P+++ + +I G G
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 274 LFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN--------- 324
E + F M R T+VT R+ D K V E
Sbjct: 187 RVDEAREIFDEM--SERSVITWTTMVTGYGQNNRVD--DARKIFDVMPEKTEVSWTSMLM 242
Query: 325 GYQGN-----------------VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
GY N V NA+I + G I A VF+SM ++ +W T+
Sbjct: 243 GYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDY 426
I +G AL LF M+ G P T I IL C + + G + Q + +
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELA 486
+ + ++ + + G L ++ R P D ++W +++ Y + L E A
Sbjct: 363 DV--DVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISG---YASHGLGEEA 416
Query: 487 LERLTEL 493
L+ E+
Sbjct: 417 LKVFCEM 423
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 18/285 (6%)
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYA 239
G I AR LF+ + + WN++V+GY +ARKLFD+MP +++ISWN ++SGY
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYM 90
Query: 240 NNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIV 299
NG+++E +++F+ MPERNV SW L+ GY +NG F +M + +V +
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV-----SWT 145
Query: 300 TVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
+L + G +D + ++ E + N+ ++I K G ++ A ++F+ M +
Sbjct: 146 VMLIGFLQDGRIDDACKLY---EMIPDKDNI-ARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
+ITW T+++G + R A +F M E +++ +L G +E+ F
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNGRIEDAEELF 257
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADA 464
+ M + I M+ L + G +A+A M DA
Sbjct: 258 EVMPVKPVIA-----CNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%), Gaps = 49/329 (14%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
E+S ++T Q ++ ARK+FD + ++ VSW +M GY QN LF
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 91 M-------------------------KKLDAMP--NCFTFPIVLKSCVKINALREGEELH 123
M + D+M N ++ V+K + E +L
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD----ERNVVVWTSMINGYISC 179
L+ K G R +++ + ++ ++ +V ++ + +V V + ++ YI C
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 180 GDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP-----KKDVISWNTM 234
G++V ++ +F+ P +D+I+WN+I+SGY EA K+F +MP K + +++
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 235 LSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYA-------NNGLFFEVLDAFKRMLT 287
LS + G VEE +++E M +VF + YA G F E ++ M
Sbjct: 440 LSACSYAGMVEEGLKIYESM--ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 288 EGRVFPNDATIVTVLSACARLGALDFSKW 316
E P+ A ++L AC LD +++
Sbjct: 498 E----PDAAVWGSLLGACRTHSQLDVAEF 522
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 31/293 (10%)
Query: 232 NTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
N ++ + G + E ++LF+ +++ SWN ++ GY N + + F M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 292 FPNDATIVT---VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
D I++ ++S + G +D ++ V + NV AL+ Y G ++
Sbjct: 75 --PDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDV 128
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTH 408
A +F M K+ ++W ++ G GR A L+ + + D I ++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCK 184
Query: 409 MGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWA 468
G V+E F M+ + S++ + MV + R+ +A MP E V W
Sbjct: 185 EGRVDEAREIFDEMS-ERSVIT----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWT 238
Query: 469 NLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
++L +E A E L E+ P P + + + LG+ ++A+ +
Sbjct: 239 SMLMGYVQNGRIEDA----EELFEVMPVKPV--IACNAMISGLGQKGEIAKAR 285
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L + H Q+ Q+V + Y+ ++T + ++ ++ +FD+ ++++ WN++
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 72 FNGYAQNEFHRTVVVLFTQMK-KLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+GYA + + +F +M PN TF L +C + EG +++
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/518 (37%), Positives = 287/518 (55%), Gaps = 24/518 (4%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I+ A+ +++ A +F+K+ ++N VSW+AM G+ QN + VVLF +M D+ P
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL 201
Query: 100 CFTFPIVLKSCVKINALREGEEL--HCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKV 157
C ++ +K L E + L +G ++ LI Y +EAA +
Sbjct: 202 C----ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL 257
Query: 158 F------------GEMDER---NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
F GE ER NVV W SMI Y+ GD+VSAR LF+ +RD I WNT
Sbjct: 258 FDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNT 317
Query: 203 IVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSW 262
++ GY+ V M +A LF +MP +D SWN M+SGYA+ G+VE + FE+ PE++ SW
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSW 377
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N +I Y N + E +D F RM EG P+ T+ ++LSA L L +H
Sbjct: 378 NSIIAAYEKNKDYKEAVDLFIRMNIEGEK-PDPHTLTSLLSASTGLVNLRLGMQMHQIV- 435
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DLITWNTIISGLAMHGRGAGAL 381
+V V NALI MY++CG I + +F+ M K ++ITWN +I G A HG + AL
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
+LF MK+ G P ITF+ +L AC H GLV+E + F SM Y I PQ+EHY +V++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
+ G+ EA+ + MP E D +W LL +CR+Y NV LA +A E ++ LEP++ +
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
V+L N+Y D+G W + +++++ M KK G S ++
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 188/404 (46%), Gaps = 81/404 (20%)
Query: 122 LHCLVLKN----------GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTS 171
L CL+ N GFRA L ++ +G EA +F +++ RN V W +
Sbjct: 21 LKCLLCANSFSTSVSSSLGFRA---TNKELNQMIRSGYIAEAR-DIFEKLEARNTVTWNT 76
Query: 172 MINGYISCGDIVSARCLFELAPERDVILWNTIVSGYID---VRNMIEARKLFDQMPKKDV 228
MI+GY+ ++ AR LF++ P+RDV+ WNT++SGY+ +R + EARKLFD+MP +D
Sbjct: 77 MISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDS 136
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
SWNTM+SGYA N + E LFE+MPERN SW+ +I G+ NG + F++M +
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK 196
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWV-------------HVYAEYN------GYQG- 328
+ + + +++ + L + WV VYA YN G +G
Sbjct: 197 -----DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA-YNTLIVGYGQRGQ 250
Query: 329 -----------------------------NVCVGNALIDMYAKCGIIENAVDVFNSMDTK 359
NV N++I Y K G + +A +F+ M +
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 360 DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYF 419
D I+WNT+I G R A +LF EM N D ++ ++ +G VE YF
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYF 366
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEAD 463
+ +++ + ++ + EAVD RM IE +
Sbjct: 367 EKTPEKHTV-----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGE 405
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 290/534 (54%), Gaps = 17/534 (3%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
I Q V G + + I+ + ++ ARK+FD++ +++ + WN M +GY +NE
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 81 HRTVVVLFTQM-----KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ + +F + +LD T +L + ++ LR G ++H L K G ++
Sbjct: 201 YVESIQVFRDLINESCTRLDTT----TLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-EL--- 191
+V T I LYS I+ +F E + ++V + +MI+GY S G+ + LF EL
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 192 -APERDVILWNTI-VSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKR 249
A R L + + VSG++ + I L +S + + Y+ ++E ++
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVS-TALTTVYSKLNEIESARK 375
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
LF+E PE+++ SWN +I GY NGL + + F+ M + PN TI +LSACA+LG
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSACAQLG 434
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL KWVH ++ ++ V ALI MYAKCG I A +F+ M K+ +TWNT+IS
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G +HG+G AL++F+EM N+G P +TF+ +L AC+H GLV+EG F SM Y
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P ++HY CMVD+L RAG L A+ F++ M IE + +W LLG+CR++K+ LA E+
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 490 LTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
L EL+P N V+LSNI+ + A ++ + K PG + IE+ E
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 208/466 (44%), Gaps = 16/466 (3%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
HL Q Q++ G + ++ + L + YAR +F + +V +N + G++
Sbjct: 35 HLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFS 94
Query: 77 QNEFHRTVVVLFTQMKK-LDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
NE + + +F ++K D PN T+ + + R G +H + +G + +
Sbjct: 95 VNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSEL 154
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-----E 190
+G+ ++++Y +E A KVF M E++ ++W +MI+GY V + +F E
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSG----YANNGDVEE 246
D I+ +++ + ++ K S + +L+G Y+ G ++
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
LF E + ++ ++N +I GY +NG L FK ++ G +T+V+++
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL-RSSTLVSLVPVS- 332
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
G L +H Y + + + V AL +Y+K IE+A +F+ K L +WN
Sbjct: 333 --GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDY 426
+ISG +G A+SLF EM+ + P+ +T IL AC +G + G + +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRST 449
Query: 427 SIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
I ++ + A+ G +AEA M + + V W ++
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMIS 494
Score = 39.3 bits (90), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 30/201 (14%)
Query: 294 NDATIVTVLSACARLGALDFSK---------WVHVYAEYNGYQGNVCVGNALIDMYAKCG 344
+ AT T + ++ LDF K H +G++ ++ + L + G
Sbjct: 7 SSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLG 66
Query: 345 IIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGIL 403
I A D+F S+ D+ +N ++ G +++ +LS+F ++ + ++ P+ T+ +
Sbjct: 67 AIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAI 126
Query: 404 CACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAG---------RLAEAVDF 454
A + G +D GC +LL + R+ +A
Sbjct: 127 SAASGFRDDRAGRVIHGQAVVD----------GCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 455 VKRMPIEADAVIWANLLGSCR 475
RMP E D ++W ++ R
Sbjct: 177 FDRMP-EKDTILWNTMISGYR 196
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 332 bits (851), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 300/571 (52%), Gaps = 59/571 (10%)
Query: 26 VTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVV 85
+ +G + ++ ++ ++ + ++ ARK+FD+++ +VVSWN++ YA+ + +
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 86 VLFTQM-KKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIEL 144
+F++M + P+ T VL C + G++LHC + + N+FVG L+++
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 145 YSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILW 200
Y+ ++ A VF M ++VV W +M+ GY G A LFE E DV+ W
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 201 NTIVSGYIDVRNMIEA----RKLFDQMPKKDVISWNTMLSGYAN---------------- 240
+ +SGY EA R++ K + ++ ++LSG A+
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 241 -------NGDVEE-------------CKR------LFEEMP--ERNVFSWNGLIGGYANN 272
NG +E CK+ +F+ + ER+V +W +IGGY+ +
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 273 GLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
G + L+ M E + PN TI L ACA L AL K +H YA N Q N
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAV 511
Query: 332 ---VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMK 388
V N LIDMYAKCG I +A VF++M K+ +TW ++++G MHG G AL +F EM+
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 389 NAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRL 448
G DG+T + +L AC+H G++++G+ YF M + + P EHY C+VDLL RAGRL
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 449 AEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIY 508
A+ ++ MP+E V+W L CR++ VEL E A E++TEL + ++ +LSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 509 GDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
+ GRWKDV RI+ MR G KK PGCS +E
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 250/520 (48%), Gaps = 62/520 (11%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKI--TDQNVVS 67
+ +T + I ++++ G+ + +T +I+ + +++A + + +D V
Sbjct: 36 HKCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 94
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVL 127
WN++ Y N + LF M L P+ +TFP V K+C +I+++R GE H L L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARC 187
GF +N+FVG AL+ +YS +++ A KVF EM +VV W S+I Y G A
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 188 LFE------------------LAP----------------------ERDVILWNTIVSGY 207
+F L P +++ + N +V Y
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPER----NVFSWN 263
M EA +F M KDV+SWN M++GY+ G E+ RLFE+M E +V +W+
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 264 GLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA-- 321
I GYA GL +E L ++ML+ G + PN+ T+++VLS CA +GAL K +H YA
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Query: 322 -----EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK--DLITWNTIISGLAMH 374
NG+ V N LIDMYAKC ++ A +F+S+ K D++TW +I G + H
Sbjct: 394 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 375 GRGAGALSLFHEM--KNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQ 431
G AL L EM ++ P+ T L AC + + G + ++ + VP
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
C++D+ A+ G +++A M + + V W +L+
Sbjct: 514 FVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLM 551
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 24/325 (7%)
Query: 234 MLSGYANNGDVEECKRLFEEMPERN--VFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRV 291
++S Y + G + L P + V+ WN LI Y +NG + L F M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 292 FPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P++ T V AC + ++ + H + G+ NV VGNAL+ MY++C + +A
Sbjct: 125 -PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 352 VFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA-GEMPDGITFIGILCACTHMG 410
VF+ M D+++WN+II A G+ AL +F M N G PD IT + +L C +G
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 411 LVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANL 470
G A+ ++ + C+VD+ A+ G + EA M ++ D V W +
Sbjct: 244 THSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAM 301
Query: 471 LGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFK 530
+ E A E++ E I D+ W A A R G++
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQE------------EKIKMDVVTW-SAAISGYAQRGLGYE 348
Query: 531 KLPGC-----SSIEVNEVVMLGCLS 550
L C S I+ NEV ++ LS
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLS 373
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 331 bits (849), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 283/522 (54%), Gaps = 43/522 (8%)
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+++ +N M A + V+ LF +++ P+ FT P+VLKS ++ + EGE++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
+K G + +V +L+ +Y++ IE +KVF EM +R+VV W +I+ Y+ G
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 184 SARCLFELAP---------------------------------------ERDVILWNTIV 204
A +F+ E V + N +V
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALV 189
Query: 205 SGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNG 264
+ + +AR +FD M K+V W +M+ GY + G ++E + LFE P ++V W
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 265 LIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYN 324
++ GY F E L+ F+ M T G + P++ +V++L+ CA+ GAL+ KW+H Y N
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 325 GYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLF 384
+ VG AL+DMYAKCG IE A++VF + +D +W ++I GLAM+G AL L+
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
+EM+N G D ITF+ +L AC H G V EG F SM +++ P+ EH C++DLL R
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Query: 445 AGRLAEAVDFVKRMPIEADAV---IWANLLGSCRVYKNVELAELALERLTELEPKNPANF 501
AG L EA + + +M E+D ++ +LL + R Y NV++AE E+L ++E + +
Sbjct: 429 AGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH 488
Query: 502 VMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEV 543
+L+++Y RW+DV ++ M+D G +K PGCSSIE++ V
Sbjct: 489 TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGV 530
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 43/379 (11%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
++ V +GLE Y++ ++ A L ++ K+FD++ ++VVSWN + + Y N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 79 EFHRTVVVLFTQMKKLDAMP-NCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ +F +M + + + T L +C + L GE ++ V+ F ++ +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
G AL++++ ++ A VF M ++NV WTSM+ GY+S G I AR LFE +P +DV
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 198 ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEECK----- 248
+LW +++GY+ EA +LF M + N ++L+G A G +E+ K
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 249 ------------------------------RLFEEMPERNVFSWNGLIGGYANNGLFFEV 278
+F E+ ER+ SW LI G A NG+
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRA 364
Query: 279 LDAFKRMLTEGRVFPNDATIVTVLSACARLGAL-DFSKWVHVYAEYNGYQGNVCVGNALI 337
LD + M G V + T V VL+AC G + + K H E + Q + LI
Sbjct: 365 LDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 338 DMYAKCGIIENAVDVFNSM 356
D+ + G+++ A ++ + M
Sbjct: 424 DLLCRAGLLDEAEELIDKM 442
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 293/531 (55%), Gaps = 13/531 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQM-TYARKMFDKITD-QNVVSWNAMFNGYAQ 77
QIQTQ++T L + D I +++T + +Y+ + I + S+N + + YA
Sbjct: 24 QIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAV 83
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ R + + P+ FTFP V K+C K + +REG+++H +V K GF +I+V
Sbjct: 84 CDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYV 143
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF---ELAPE 194
+L+ Y A KVFGEM R+VV WT +I G+ G A F ++ P
Sbjct: 144 QNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPN 203
Query: 195 RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVI----SWNTMLSGYANNGDVEECKRL 250
+ + SG + ++ + + + K+ + + N ++ Y + + R+
Sbjct: 204 LATYVCVLVSSGRVGCLSL--GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRV 261
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F E+ +++ SWN +I G + E +D F M T + P+ + +VLSACA LGA
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
+D +WVH Y G + + +G A++DMYAKCG IE A+++FN + +K++ TWN ++ G
Sbjct: 322 VDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG 381
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSM-AMDYSIV 429
LA+HG G +L F EM G P+ +TF+ L AC H GLV+EG YF M + +Y++
Sbjct: 382 LAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLF 441
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNV-ELAELALE 488
P++EHYGCM+DLL RAG L EA++ VK MP++ D I +L +C+ + EL + L+
Sbjct: 442 PKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILD 501
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
++E ++ +V+LSNI+ RW DVARI+ M+ G K+PG S IE
Sbjct: 502 SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
L H + ++T+G++ +I I+ A+ + A ++F+ I +NV +WNA
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEE 121
+ G A + + F +M KL PN TF L +C + EG
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 289/545 (53%), Gaps = 15/545 (2%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
Q E + QI VV GL Y+ +++ ++ + A +F + D+ + WN
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM YA+N++ + + LF M++ +P+ FT V+ C + G+ +H + K
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
++ + +AL+ LYS AY VF M+E+++V W S+I+G G A +F
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 190 --------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSG 237
L P+ D++ ++ + + + ++ M K +V ++++
Sbjct: 463 GDMKDDDDSLKPDSDIM--TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 238 YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDAT 297
Y+ G E ++F M N+ +WN +I Y+ N L +D F ML++G +FP+ +
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVS 579
Query: 298 IVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD 357
I +VL A + +L K +H Y G + + NALIDMY KCG + A ++F M
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 358 TKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS 417
K LITWN +I G HG ALSLF EMK AGE PD +TF+ ++ AC H G VEEG +
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKN 699
Query: 418 YFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
F+ M DY I P +EHY MVDLL RAG L EA F+K MPIEAD+ IW LL + R +
Sbjct: 700 IFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH 759
Query: 478 KNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSS 537
NVEL L+ E+L +EP+ + +V L N+Y + G + A++ M++ G K PGCS
Sbjct: 760 HNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSW 819
Query: 538 IEVNE 542
IEV++
Sbjct: 820 IEVSD 824
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 233/489 (47%), Gaps = 28/489 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK-------ITDQNVVSWNAMFN 73
I VV G +I ++ + + YA ++FD ++ ++V WN+M +
Sbjct: 82 IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 74 GYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALR--EGEELHCLVLKNGF 131
GY + + V F +M P+ F+ IV+ K R EG+++H +L+N
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 132 RANIFVGTALIELY-STGKAIEAAYKVFGEM-DERNVVVWTSMINGYISCGDIVSARCLF 189
+ F+ TALI++Y G +I+ A++VF E+ D+ NVV+W MI G+ G S+ L+
Sbjct: 202 DTDSFLKTALIDMYFKFGLSID-AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 190 ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANN 241
LA V L +T +G + + E Q+ D ++LS Y+
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 242 GDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
G V E + +F + ++ + WN ++ YA N + LD F M + V P+ T+ V
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM-RQKSVLPDSFTLSNV 379
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
+S C+ LG ++ K VH Q + +AL+ +Y+KCG +A VF SM+ KD+
Sbjct: 380 ISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM 439
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGE--MPDGITFIGILCACTHMGLVEEGLSYF 419
+ W ++ISGL +G+ AL +F +MK+ + PD + AC + + GL
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH 499
Query: 420 QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
SM + +V + ++DL ++ G A+ M E + V W +++ SC Y
Sbjct: 500 GSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SC--YSR 554
Query: 480 VELAELALE 488
L EL+++
Sbjct: 555 NNLPELSID 563
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 212/449 (47%), Gaps = 11/449 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ-NVVSWNAMFNGYAQN 78
QI ++ + L+ ++ +I + A ++F +I D+ NVV WN M G+ +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ + L+ K +F L +C + G ++HC V+K G + +V
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVC 310
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
T+L+ +YS + A VF + ++ + +W +M+ Y SA LF ++ V+
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 199 LWNTIVSGYIDVRNMI----EARKLFDQMPKKDVISWNT----MLSGYANNGDVEECKRL 250
+ +S I +++ + + ++ K+ + S +T +L+ Y+ G + +
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT-VLSACARLG 309
F+ M E+++ +W LI G NG F E L F M + D+ I+T V +ACA L
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
AL F VH G NV VG++LID+Y+KCG+ E A+ VF SM T++++ WN++IS
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
+ + ++ LF+ M + G PD ++ +L A + + +G S + I
Sbjct: 551 CYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-LHGYTLRLGIP 609
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRM 458
++D+ + G A + K+M
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 173/395 (43%), Gaps = 24/395 (6%)
Query: 101 FTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVF-- 158
FTFP +LK+C + L G+ +H V+ G+R + F+ T+L+ +Y ++ A +VF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 159 -----GEMDERNVVVWTSMINGYISCGDIVSA----RCLFELAPERDVILWNTIVSGYID 209
+ R+V VW SMI+GY R + D + +VS
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 210 VRNMI--EARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLFEEMPER-NVFSW 262
N E +++ M + D ++ Y G + R+F E+ ++ NV W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVT-VLSACARLGALDFSKWVHVYA 321
N +I G+ +G+ LD + ML + +T T L AC++ F + +H
Sbjct: 241 NVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
G + V +L+ MY+KCG++ A VF+ + K L WN +++ A + G AL
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M+ +PD T ++ C+ +GL G S + I ++ L
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL-FKRPIQSTSTIESALLTL 417
Query: 442 LARAGRLAEAVDFVKRMPIEADAVIWANLL-GSCR 475
++ G +A K M E D V W +L+ G C+
Sbjct: 418 YSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCK 451
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Query: 261 SWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVY 320
S N I G + + L + + + + T ++L AC+ L L + K +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 321 AEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFN-------SMDTKDLITWNTIISGLAM 373
G++ + + +L++MY KCG ++ AV VF+ + +D+ WN++I G
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITF---IGILC 404
R + F M G PD + + ++C
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/503 (35%), Positives = 277/503 (55%), Gaps = 67/503 (13%)
Query: 43 ACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFT 102
A A ++ ++ +F + D ++ + A N + N +L+ Q+ + PN FT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 103 FPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMD 162
F +LKSC + + G+ +H VLK G + +V T
Sbjct: 133 FSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATG---------------------- 166
Query: 163 ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQ 222
+++ Y GD+VSA+ K+FD+
Sbjct: 167 ---------LVDVYAKGGDVVSAQ-------------------------------KVFDR 186
Query: 223 MPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAF 282
MP++ ++S M++ YA G+VE + LF+ M ER++ SWN +I GYA +G + L F
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 283 KRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAK 342
+++L EG+ P++ T+V LSAC+++GAL+ +W+HV+ + + + NV V LIDMY+K
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 343 CGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKN-AGEMPDGITFIG 401
CG +E AV VFN KD++ WN +I+G AMHG AL LF+EM+ G P ITFIG
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 402 ILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIE 461
L AC H GLV EG+ F+SM +Y I P+IEHYGC+V LL RAG+L A + +K M ++
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 462 ADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIK 521
AD+V+W+++LGSC+++ + L + E L L KN +V+LSNIY +G ++ VA+++
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 522 VAMRDTGFKKLPGCSSIEVNEVV 544
M++ G K PG S+IE+ V
Sbjct: 487 NLMKEKGIVKEPGISTIEIENKV 509
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 31 EKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQ 90
E+S + +IT A+ + AR +FD + ++++VSWN M +GYAQ+ F ++LF +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 91 -MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGK 149
+ + P+ T L +C +I AL G +H V + R N+ V T LI++YS
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 150 AIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
++E A VF + +++V W +MI GY G A LF
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 328 bits (841), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 294/528 (55%), Gaps = 7/528 (1%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ T VV +GL+K+ ++ +I + + AR +FDK ++VV+WN+M +GYA N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F M+ + +F V+K C + LR E+LHC V+K GF + + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
AL+ YS A+ A ++F E+ NVV WT+MI+G++ A LF + V
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNT----MLSGYANNGDVEECKRLFEEM 254
S + +I ++ Q+ K + +T +L Y G VEE ++F +
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 255 PERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA-LDF 313
++++ +W+ ++ GYA G + F LT+G + PN+ T ++L+ CA A +
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 314 SKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAM 373
K H +A + ++CV +AL+ MYAK G IE+A +VF KDL++WN++ISG A
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 374 HGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIE 433
HG+ AL +F EMK DG+TFIG+ ACTH GLVEEG YF M D I P E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 434 HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTEL 493
H CMVDL +RAG+L +A+ ++ MP A + IW +L +CRV+K EL LA E++ +
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 693
Query: 494 EPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
+P++ A +V+LSN+Y + G W++ A+++ M + KK PG S IEV
Sbjct: 694 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 741
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 224/492 (45%), Gaps = 26/492 (5%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
Q+ Q + G + ++ + RK+FD++ ++NVV+W + +GYA+N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 79 EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVG 138
+ V+ LF +M+ PN FTF L + G ++H +V+KNG I V
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
+LI LY + A +F + + ++VV W SMI+GY + G + A +F V
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 199 LWNTIVSGYIDV-RNMIEARKLFDQMPKKDVISW---------NTMLSGYANNGDVEECK 248
L + + I + N+ E R F + V+ + ++ Y+ + +
Sbjct: 293 LSESSFASVIKLCANLKELR--FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 249 RLFEEMP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
RLF+E+ NV SW +I G+ N E +D F M +G V PN+ T +L+A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPV 409
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+ + VH Y+ + VG AL+D Y K G +E A VF+ +D KD++ W+ +
Sbjct: 410 ISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGIL--CACTHMGLVEEGLSYFQSMAMD 425
++G A G A+ +F E+ G P+ TF IL CA T+ + + F A+
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG--KQFHGFAIK 523
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
+ + ++ + A+ G + A + KR E D V W +++ Y A
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG---YAQHGQAMK 579
Query: 486 ALERLTELEPKN 497
AL+ E++ +
Sbjct: 580 ALDVFKEMKKRK 591
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 213/482 (44%), Gaps = 83/482 (17%)
Query: 53 ARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVK 112
A +FDK ++ S+ ++ G++++ + LF + +L +C F VLK
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 113 INALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSM 172
+ G +LHC +K GF ++ VGT+L++ Y G + KVF EM ERNVV WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 173 INGYI--SCGDIV------------------SARCLFELAPE------------------ 194
I+GY S D V A L LA E
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 195 -RDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNG-DVEECKRLFE 252
+ + + N++++ Y+ N+ +AR LFD+ K V++WN+M+SGYA NG D+E
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL----- 280
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
G+F+ + + R+ ++++ +V+ CA L L
Sbjct: 281 --------------------GMFYSMRLNYVRL--------SESSFASVIKLCANLKELR 312
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLITWNTIISGL 371
F++ +H G+ + + AL+ Y+KC + +A+ +F + ++++W +ISG
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+ A+ LF EMK G P+ T+ IL A + ++ + Q + +Y
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSST 429
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+ ++D + G++ EA + + D V W+ +L Y E A++
Sbjct: 430 VG--TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG---YAQTGETEAAIKMFG 483
Query: 492 EL 493
EL
Sbjct: 484 EL 485
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 206 GYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
G + + A LFD+ P +D S+ ++L G++ +G +E KRLF +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR--------- 86
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
+G + +F VL AT+ C L F + +H G
Sbjct: 87 LGMEMDCSIFSSVLKV-------------SATL------CDEL----FGRQLHCQCIKFG 123
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+ +V VG +L+D Y K ++ VF+ M ++++TW T+ISG A + L+LF
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
M+N G P+ TF L G+ GL ++ + + I +++L +
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ-VHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLL 471
G + +A + +++ V W +++
Sbjct: 243 GNVRKARILFDKTEVKS-VVTWNSMI 267
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 280/532 (52%), Gaps = 61/532 (11%)
Query: 30 LEKSDYITP-----------RIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQN 78
L +SDY+T +II C + + A ++F + +N ++WN++ G +++
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 79 -----EFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
E H+ LF ++ + P+ F++ I+L SC
Sbjct: 106 PSRMMEAHQ----LFDEIPE----PDTFSYNIML-SC----------------------- 133
Query: 134 NIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAP 193
Y E A F M ++ W +MI GY G++ AR LF
Sbjct: 134 -----------YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
E++ + WN ++SGYI+ ++ +A F P + V++W M++GY VE + +F++
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 254 MP-ERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
M +N+ +WN +I GY N + L F+ ML EG + PN + + + L C+ L AL
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQ 301
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ +H + +V +LI MY KCG + +A +F M KD++ WN +ISG A
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQI 432
HG AL LF EM + PD ITF+ +L AC H GLV G++YF+SM DY + PQ
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 433 EHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTE 492
+HY CMVDLL RAG+L EA+ ++ MP A ++ LLG+CRV+KNVELAE A E+L +
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
Query: 493 LEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +N A +V L+NIY RW+DVAR++ M+++ K+PG S IE+ V
Sbjct: 482 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKV 533
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 41/250 (16%)
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMH-GRGAGALSLFH 385
Q + N +I + G I+ A+ VF+ M K+ ITWN+++ G++ R A LF
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 386 EMKNAGEMPDGITFIGILCACTHMGL-VEEGLSYFQSMAMD------------------- 425
E+ PD ++ I+ +C + E+ S+F M
Sbjct: 118 EIPE----PDTFSY-NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEME 172
Query: 426 ------YSIVPQIE-HYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
YS++ + E + M+ G L +A F K P+ V W ++ K
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG-VVAWTAMITGYMKAK 231
Query: 479 NVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSI 538
VELAE + +T KN + + + Y + R +D ++ AM + G + P S +
Sbjct: 232 KVELAEAMFKDMT--VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR--PNSSGL 287
Query: 539 EVNEVVMLGC 548
+LGC
Sbjct: 288 ---SSALLGC 294
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 290/552 (52%), Gaps = 24/552 (4%)
Query: 11 QLETTK---HLHQIQTQVVTSGLEKSDYITPRII---TACAQLKQMTYARKMFDKITDQN 64
QLE + L+Q+ ++ S + ++ R+I T C + ++YAR +F+ I +
Sbjct: 12 QLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPS 71
Query: 65 VVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC 124
V WN+M GY+ + ++ + +M + P+ FTFP VLK+C + ++ G +H
Sbjct: 72 VYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHG 131
Query: 125 LVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVS 184
V+K GF N++V T L+ +Y + +VF ++ + NVV W S+I+G+++
Sbjct: 132 FVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSD 191
Query: 185 ARCLFELAPERDVILWNTIVSGYI----DVRNMIEAR------------KLFDQMPKKDV 228
A F V TI+ + ++++ + F +V
Sbjct: 192 AIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNV 251
Query: 229 ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTE 288
I +++ YA GD+ + LF+ MPER + SWN +I GY+ NG E L F ML
Sbjct: 252 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 289 GRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIEN 348
G + P+ T ++V+ A G + +H Y G+ + + AL++MYAK G E+
Sbjct: 312 G-IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 349 AVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE-MPDGITFIGILCACT 407
A F ++ KD I W +I GLA HG G ALS+F M+ G PDGIT++G+L AC+
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 408 HMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW 467
H+GLVEEG YF M + + P +EHYGCMVD+L+RAGR EA VK MP++ + IW
Sbjct: 431 HIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIW 490
Query: 468 ANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDT 527
LL C +++N+EL + + E E +V+LSNIY GRW DV I+ +M+
Sbjct: 491 GALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSK 550
Query: 528 GFKKLPGCSSIE 539
K+ G SS+E
Sbjct: 551 RVDKVLGHSSVE 562
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 325 bits (833), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 301/534 (56%), Gaps = 14/534 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q+ VV SG++ I +++ ++ + A K+F ++ + V+WN M +GY Q+
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ F +M +P+ TF +L S K L +++HC ++++ +IF+ +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF------ELAP 193
ALI+ Y + + A +F + + +VVV+T+MI+GY+ G + + +F +++P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTM----LSGYANNGDVEECKR 249
++ V G + + R+L + KK + + + YA G +
Sbjct: 440 NEITLVSILPVIGILLALKL--GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+FE + +R++ SWN +I A + +D F++M G + + +I LSACA L
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACANLP 556
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+ F K +H + + +V + LIDMYAKCG ++ A++VF +M K++++WN+II+
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 370 GLAMHGRGAGALSLFHEM-KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSI 428
HG+ +L LFHEM + +G PD ITF+ I+ +C H+G V+EG+ +F+SM DY I
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 429 VPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALE 488
PQ EHY C+VDL RAGRL EA + VK MP DA +W LLG+CR++KNVELAE+A
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASS 736
Query: 489 RLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
+L +L+P N +V++SN + + W+ V +++ M++ +K+PG S IE+N+
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINK 790
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 229/471 (48%), Gaps = 11/471 (2%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K + + V + G++ ++++ +I A + ++ K+FD++ ++ V WN M
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
NGYA+ +V+ F+ M+ PN TF VL C + G +LH LV+ +G
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF-E 190
+ +L+ +YS + A K+F M + V W MI+GY+ G + + F E
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 191 LAPE---RDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGYANNGD 243
+ D I +++++ N+ +++ + + D+ + ++ Y
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 244 VEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLS 303
V + +F + +V + +I GY +NGL+ + L+ F R L + ++ PN+ T+V++L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVKISPNEITLVSILP 449
Query: 304 ACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLIT 363
L AL + +H + G+ +G A+IDMYAKCG + A ++F + +D+++
Sbjct: 450 VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 364 WNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMA 423
WN++I+ A + A+ +F +M +G D ++ L AC ++ G +
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKA-IHGFM 568
Query: 424 MDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC 474
+ +S+ + ++D+ A+ G L A++ K M E + V W +++ +C
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 222/484 (45%), Gaps = 33/484 (6%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKIT--DQNVVSWNAMFNGYAQ 77
Q+ ++ + + Y RI+ A + KMF ++ ++ WN++ + + +
Sbjct: 56 QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N + + +M P+ TFP ++K+CV + + + L V G N FV
Sbjct: 116 NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFV 175
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
++LI+ Y I+ K+F + +++ V+W M+NGY CG + S F + D
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQ 234
Query: 198 ILWNTIVSGYIDVRNMIEARKLFD---QMPKKDVISW--------NTMLSGYANNGDVEE 246
I N + + V ++ ++ L D Q+ V+S N++LS Y+ G ++
Sbjct: 235 ISPNAVT--FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 247 CKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACA 306
+LF M + +WN +I GY +GL E L F M++ G V P+ T ++L + +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG-VLPDAITFSSLLPSVS 351
Query: 307 RLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNT 366
+ L++ K +H Y + ++ + +ALID Y KC + A ++F+ ++ D++ +
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 367 IISGLAMHGRGAGALSLFHEMKNAGEMPDGITF------IGILCACTHMGLVEEGLSYFQ 420
+ISG +G +L +F + P+ IT IGIL A + L E +
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLA---LKLGRELHGFII 468
Query: 421 SMAMDYSIVPQIEHYGC-MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKN 479
D + GC ++D+ A+ GR+ A + +R+ + D V W +++ C N
Sbjct: 469 KKGFDNRC-----NIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Query: 480 VELA 483
A
Sbjct: 523 PSAA 526
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 174/386 (45%), Gaps = 32/386 (8%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
+ E ++ QI ++ + ++T +I A + + ++ A+ +F + +VV +
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
AM +GY N + + +F + K+ PN T +L + AL+ G ELH ++K
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLF 189
GF +G A+I++Y+ + AY++F + +R++V W SMI RC
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMIT-----------RCAQ 519
Query: 190 ELAPERDVILWNTI-VSGYI-DVRNMIEARKLFDQMPKK-----------------DVIS 230
P + ++ + VSG D ++ A +P + DV S
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 231 WNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR 290
+T++ YA G+++ +F+ M E+N+ SWN +I N+G + L F M+ +
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 291 VFPNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENA 349
+ P+ T + ++S+C +G +D ++ E G Q ++D++ + G + A
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 350 VDVFNSMD-TKDLITWNTIISGLAMH 374
+ SM D W T++ +H
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 150/311 (48%), Gaps = 15/311 (4%)
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
++L++C N LR+G+++H ++ N + + ++ +Y+ + K+F +D R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 165 NVVV--WTSMINGYISCGDIVSARCL------FELAPERDVILWNTIVSGYIDVRNMIEA 216
+ W S+I+ ++ G + A F ++P DV + +V + ++N
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP--DVSTFPCLVKACVALKNFKGI 157
Query: 217 RKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
L D + + ++++ Y G ++ +LF+ + +++ WN ++ GYA
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCV 332
G V+ F M + ++ PN T VLS CA +D +H +G +
Sbjct: 218 GALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 333 GNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGE 392
N+L+ MY+KCG ++A +F M D +TWN +ISG G +L+ F+EM ++G
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 393 MPDGITFIGIL 403
+PD ITF +L
Sbjct: 337 LPDAITFSSLL 347
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK- 359
+L AC+ L K VH + N G+ ++ MYA CG + +F +D +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 360 -DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHM 409
+ WN+IIS +G AL+ + +M G PD TF ++ AC +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 287/530 (54%), Gaps = 41/530 (7%)
Query: 52 YARKMFDKI-TDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSC 110
YA +F I + + +N +++ R ++ + +++ + + F+F +LK+
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 111 VKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWT 170
K++AL EG ELH + K + FV T +++Y++ I A VF EM R+VV W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 171 SMINGYISCG-------------------------DIVSA----------RCLFELAPER 195
+MI Y G +IVSA R ++E E
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 196 DVI----LWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLF 251
DV L +V+ Y M AR+ F +M +++ M+SGY+ G +++ + +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
++ ++++ W +I Y + E L F+ M G + P+ ++ +V+SACA LG L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGIL 360
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
D +KWVH NG + + + NALI+MYAKCG ++ DVF M +++++W+++I+ L
Sbjct: 361 DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL 420
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
+MHG + ALSLF MK P+ +TF+G+L C+H GLVEEG F SM +Y+I P+
Sbjct: 421 SMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK 480
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHYGCMVDL RA L EA++ ++ MP+ ++ VIW +L+ +CR++ +EL + A +R+
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
ELEP + V++SNIY RW+DV I+ M + K G S I+ N
Sbjct: 541 ELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQN 590
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 185/373 (49%), Gaps = 44/373 (11%)
Query: 45 AQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFP 104
A ++ YAR +FD+++ ++VV+WN M Y + LF +MK + MP+
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 105 IVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDER 164
++ +C + +R ++ +++N R + + TAL+ +Y+ ++ A + F +M R
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 165 NVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMP 224
N+ V T+M++GY CG + A+ +F+ ++D++ W T++S Y++ EA ++F++M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 225 ----KKDVIS------------------W-----------------NTMLSGYANNGDVE 245
K DV+S W N +++ YA G ++
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+ +FE+MP RNV SW+ +I + +G + L F RM E V PN+ T V VL C
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN-VEPNEVTFVGVLYGC 455
Query: 306 ARLGALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMD-TKDLI 362
+ G ++ K + + EYN G ++D++ + ++ A++V SM +++
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYG-CMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 363 TWNTIISGLAMHG 375
W +++S +HG
Sbjct: 515 IWGSLMSACRIHG 527
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 117/254 (46%), Gaps = 20/254 (7%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
+++ +++ ++ ++ A+ +FD+ +++V W M + Y ++++ + + +F +M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
P+ + V+ +C + L + + +H + NG + + + ALI +Y+ ++A
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV---------ILWNTIVS 205
VF +M RNVV W+SMIN G+ A LF + +V +L+ S
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 206 GYIDVRNMIEARKLFDQMPKKDVIS-----WNTMLSGYANNGDVEECKRLFEEMP-ERNV 259
G ++ E +K+F M + I+ + M+ + + E + E MP NV
Sbjct: 459 GLVE-----EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 260 FSWNGLIGGYANNG 273
W L+ +G
Sbjct: 514 VIWGSLMSACRIHG 527
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + + +GLE I +I A+ + R +F+K+ +NVVSW++M N + +
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHC-LVLKNGFRANIFVGT 139
+ LF +MK+ + PN TF VL C + EG+++ + + +
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 140 ALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELAP 193
+++L+ + A +V M NVV+W S+ I+G + G + R L EL P
Sbjct: 486 CMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL-ELEP 544
Query: 194 ERD--VILWNTIVS---GYIDVRNM---IEARKLFDQ 222
+ D ++L + I + + DVRN+ +E + +F +
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 297/516 (57%), Gaps = 12/516 (2%)
Query: 29 GLEKSDYIT-PRIITACAQLKQMTYARKMFDKI-TDQNVVSWNAMFNGYAQNEFHRTVVV 86
GL + D +T +IT +L M AR++FD++ + +NVV+W AM +GY +++ +
Sbjct: 71 GLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEM 130
Query: 87 LFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYS 146
LF +M + N ++ ++ + + + EL + + NI ++++
Sbjct: 131 LFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALV 182
Query: 147 TGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNTIVSG 206
I+ A +F M R+VV WT+M++G G + AR LF+ PER++I WN +++G
Sbjct: 183 QRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG 242
Query: 207 YIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLI 266
Y + EA +LF MP++D SWNTM++G+ N ++ + LF+ MPE+NV SW +I
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302
Query: 267 GGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY 326
GY N E L+ F +ML +G V PN T V++LSAC+ L L + +H + +
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 327 QGNVCVGNALIDMYAKCGIIENAVDVFNS--MDTKDLITWNTIISGLAMHGRGAGALSLF 384
Q N V +AL++MY+K G + A +F++ + +DLI+WN++I+ A HG G A+ ++
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Query: 385 HEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLAR 444
++M+ G P +T++ +L AC+H GLVE+G+ +F+ + D S+ + EHY C+VDL R
Sbjct: 423 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 482
Query: 445 AGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVML 504
AGRL + +F+ + +L +C V+ V +A+ ++++ E + +V++
Sbjct: 483 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLM 542
Query: 505 SNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEV 540
SNIY G+ ++ A +++ M++ G KK PGCS ++V
Sbjct: 543 SNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 18/312 (5%)
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER-DVILWN 201
EL GK EA K+F + ER+VV WT +I GYI GD+ AR LF+ R +V+ W
Sbjct: 55 ELCKVGKIAEAR-KLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWT 113
Query: 202 TIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFS 261
+VSGY+ + + A LF +MP+++V+SWNTM+ GYA +G +++ LF+EMPERN+ S
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 262 WNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYA 321
WN ++ G E ++ F+RM V + ++ A+ G +D ++ +
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVV-----SWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 322 EYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGAL 381
+ N+ NA+I YA+ I+ A +F M +D +WNT+I+G + A
Sbjct: 229 P----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 382 SLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDL 441
LF M + I++ ++ EE L+ F M D S+ P + G V +
Sbjct: 285 GLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV---GTYVSI 337
Query: 442 LARAGRLAEAVD 453
L+ LA V+
Sbjct: 338 LSACSDLAGLVE 349
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 19 HQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDK--ITDQNVVSWNAMFNGYA 76
QI + S +K++ +T ++ ++ ++ ARKMFD + ++++SWN+M YA
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 77 QNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL 122
+ + + ++ QM+K P+ T+ +L +C + +G E
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 280/530 (52%), Gaps = 47/530 (8%)
Query: 57 FDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINAL 116
F + V++W ++ + + F +M+ P+ FP VLKSC + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 117 REGEELHCLVLKNGFRANIFVGTALIELYST----GKAIEAAYKVFGEMDERNVVVWTSM 172
R GE +H +++ G +++ G AL+ +Y+ G I VF EM +R
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG-NVFDEMPQRTSNSGDED 180
Query: 173 INGY--ISCGDIVSARCLFELAPERDVILWNTIVSGYID----------VRNM------- 213
+ I I S R +FE+ P +DV+ +NTI++GY VR M
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 214 ------------------IEARKLFDQMPKK----DVISWNTMLSGYANNGDVEECKRLF 251
I+ +++ + +K DV ++++ YA + +E+ +R+F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 252 EEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGAL 311
+ R+ SWN L+ GY NG + E L F++M+T +V P +V+ ACA L L
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATL 359
Query: 312 DFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGL 371
K +H Y G+ N+ + +AL+DMY+KCG I+ A +F+ M+ D ++W II G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 372 AMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQ 431
A+HG G A+SLF EMK G P+ + F+ +L AC+H+GLV+E YF SM Y + +
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLT 491
+EHY + DLL RAG+L EA +F+ +M +E +W+ LL SC V+KN+ELAE E++
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 492 ELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
++ +N +V++ N+Y GRWK++A++++ MR G +K P CS IE+
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 169/335 (50%), Gaps = 19/335 (5%)
Query: 54 RKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKI 113
R++F+ + ++VVS+N + GYAQ+ + + + +M D P+ FT VL +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 114 NALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMI 173
+ +G+E+H V++ G +++++G++L+++Y+ IE + +VF + R+ + W S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 174 NGYISCGDIVSARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPK---- 225
GY+ G A LF V + +++++ + + ++L + +
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 226 KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRM 285
++ + ++ Y+ G+++ +++F+ M + SW +I G+A +G E + F+ M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 286 LTEGRVFPNDATIVTVLSACARLGALD-----FSKWVHVYAEYNGYQGNVCVGNALIDMY 340
+G V PN V VL+AC+ +G +D F+ VY G + A+ D+
Sbjct: 436 KRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY----GLNQELEHYAAVADLL 490
Query: 341 AKCGIIENAVDVFNSMDTKDLIT-WNTIISGLAMH 374
+ G +E A + + M + + W+T++S ++H
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 115/229 (50%), Gaps = 6/229 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
+I V+ G++ YI ++ A+ ++ + ++F ++ ++ +SWN++ GY QN
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ + LF QM P F V+ +C + L G++LH VL+ GF +NIF+ +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV-- 197
AL+++YS I+AA K+F M+ + V WT++I G+ G A LFE + V
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 198 --ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDV 244
+ + +++ V + EA F+ M K V N L YA D+
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTK--VYGLNQELEHYAAVADL 489
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 303/559 (54%), Gaps = 21/559 (3%)
Query: 35 YITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKL 94
Y+ +I ++ K + AR +FD++ +++ SWNAM +GY Q+ + + L ++ +
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 95 DAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAA 154
D++ T +L +C + G +H +K+G + +FV LI+LY+ +
Sbjct: 246 DSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 155 YKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------LAPE-RDVILWNTIVSGY 207
KVF M R+++ W S+I Y + A LF+ + P+ +I +I+S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 208 IDVR--NMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGL 265
D+R ++ L +D+ N ++ YA G V+ + +F +P +V SWN +
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 266 IGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNG 325
I GYA NG E ++ + M EG + N T V+VL AC++ GAL +H NG
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 326 YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFH 385
+V V +L DMY KCG +E+A+ +F + + + WNT+I+ HG G A+ LF
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 386 EMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARA 445
EM + G PD ITF+ +L AC+H GLV+EG F+ M DY I P ++HYGCMVD+ RA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 446 GRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLS 505
G+L A+ F+K M ++ DA IW LL +CRV+ NV+L ++A E L E+EP++ V+LS
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 506 NIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN---EVVMLG----CLSRELDRK-S 557
N+Y G+W+ V I+ G +K PG SS+EV+ EV G + E+ R+ +
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 558 IVRAEANMIKLLPQNNHPL 576
++A+ MI +P + L
Sbjct: 722 ALQAKLKMIGYVPDHRFVL 740
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 256/507 (50%), Gaps = 29/507 (5%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L++ K LH ++V S ++ I+ +++ L + AR FD I +++V +WN M
Sbjct: 67 LQSAKCLH---ARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 72 FNGYAQNEFHRTVVVLFTQ-MKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+GY + V+ F+ M P+ TFP VLK+C + +G ++HCL LK G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFG 180
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F +++V +LI LYS KA+ A +F EM R++ W +MI+GY G+ A L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 191 LAPERDVILWNTIVSGYIDVRNM-----IEARKLFDQMPKKDVISWNTMLSGYANNGDVE 245
D + +++S + + I + + + + +S N ++ YA G +
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS-NKLIDLYAEFGRLR 299
Query: 246 ECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSAC 305
+C+++F+ M R++ SWN +I Y N + F+ M R+ P+ T++++ S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASIL 358
Query: 306 ARLGALDFSKWVHVYAEYNG-YQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITW 364
++LG + + V + G + ++ +GNA++ MYAK G++++A VFN + D+I+W
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 365 NTIISGLAMHGRGAGALSLFHEMKNAGEM-PDGITFIGILCACTHMGLVEEGLSYF---- 419
NTIISG A +G + A+ +++ M+ GE+ + T++ +L AC+ G + +G+
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 420 -QSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
+ +D +V + D+ + GRL +A+ ++P ++V W L+ +
Sbjct: 479 KNGLYLDVFVVTS------LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHG 531
Query: 479 NVELAELAL-ERLTELEPKNPANFVML 504
+ E A + E L E + FV L
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTL 558
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 22/230 (9%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +++ +GL ++ + + ++ A +F +I N V WN + + +
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN-GFRANIFVG 138
V+LF +M P+ TF +L +C + EG+ ++ + G ++
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 139 TALIELYSTGKAIEAAYKVFGEMD-ERNVVVWTSM-----INGYISCGDIVSARCLFELA 192
++++Y +E A K M + + +W ++ ++G + G I S LFE+
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH-LFEVE 650
Query: 193 PER---DVILWNTIVS-----GYIDVRNMIEARKLFDQMPKKDVISWNTM 234
PE V+L N S G ++R++ + L + W++M
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL------RKTPGWSSM 694
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 303/550 (55%), Gaps = 16/550 (2%)
Query: 4 TTGAHSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ 63
+T A S LE H I ++ L K+ ++ ++ A+ + AR++F+++ D+
Sbjct: 436 STCAASHDLEMGSQFHSI---IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 64 NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELH 123
+ V+WN + Y Q+E LF +M + + LK+C ++ L +G+++H
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 124 CLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIV 183
CL +K G ++ G++LI++YS I+ A KVF + E +VV ++I GY S ++
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLE 611
Query: 184 SARCLFELAPERDV----ILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN-----TM 234
A LF+ R V I + TIV ++ + Q+ K+ S ++
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 235 LSGYANNGDVEECKRLFEEMPE-RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFP 293
L Y N+ + E LF E+ +++ W G++ G++ NG + E L +K M +G V P
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG-VLP 730
Query: 294 NDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVF 353
+ AT VTVL C+ L +L + +H + + + N LIDMYAKCG ++ + VF
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 354 NSMDTK-DLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
+ M + ++++WN++I+G A +G AL +F M+ + MPD ITF+G+L AC+H G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+G F+ M Y I +++H CMVDLL R G L EA DF++ ++ DA +W++LLG
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 473 SCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKL 532
+CR++ + E++ E+L ELEP+N + +V+LSNIY G W+ ++ MRD G KK+
Sbjct: 911 ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 533 PGCSSIEVNE 542
PG S I+V +
Sbjct: 971 PGYSWIDVEQ 980
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 222/457 (48%), Gaps = 39/457 (8%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ ++ + G++ + I+ A+ Q++YA K FD +++V +WN+M + Y+
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGK 140
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V+ F + + PN FTF IVL +C + + G ++HC ++K G N + G A
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----D 196
L+++Y+ I A +VF + + N V WT + +GY+ G A +FE + D
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPE 256
+ + T+++ YI + + +AR LF +M DV++WN M+SG+ G C+ + E
Sbjct: 261 HLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG----CETVAIE--- 313
Query: 257 RNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKW 316
FF + + V +T+ +VLSA + LD
Sbjct: 314 -----------------YFFN--------MRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 317 VHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGR 376
VH A G N+ VG++L+ MY+KC +E A VF +++ K+ + WN +I G A +G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 377 GAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYG 436
+ LF +MK++G D TF +L C +E G S F S+ + + +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGN 467
Query: 437 CMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGS 473
+VD+ A+ G L +A +RM + D V W ++GS
Sbjct: 468 ALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 229/467 (49%), Gaps = 25/467 (5%)
Query: 21 IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEF 80
+ + + GL + Y+ +++ ++ ++M A K+F+ + ++N V WNAM GYA N
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 81 HRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTA 140
V+ LF MK + FTF +L +C + L G + H +++K N+FVG A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 141 LIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAPERD 196
L+++Y+ A+E A ++F M +R+ V W ++I Y+ + A LF+ D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 197 VILWNTIVSGYIDVRNMIEARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFE 252
+ + V + + +++ K +D+ + ++++ Y+ G +++ +++F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+PE +V S N LI GY+ N L E + F+ MLT G V P++ T T++ AC + +L
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLT 646
Query: 313 FSKWVHVYAEYNGYQG-NVCVGNALIDMYAKCGIIENAVDVFNSMDT-KDLITWNTIISG 370
H G+ +G +L+ MY + A +F+ + + K ++ W ++SG
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ +G AL + EM++ G +PD TF+ +L C+ + + EG + +S++
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-------HSLIF 759
Query: 431 QIEH------YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLL 471
+ H ++D+ A+ G + + M ++ V W +L+
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 189/375 (50%), Gaps = 10/375 (2%)
Query: 40 IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPN 99
+I +L ++ AR +F +++ +VV+WN M +G+ + + F M+K
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 100 CFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFG 159
T VL + + L G +H +K G +NI+VG++L+ +YS + +EAA KVF
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 160 EMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVRNMIE 215
++E+N V W +MI GY G+ LF D + +++S ++
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 216 ARKLFDQMPK----KDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
+ + K K++ N ++ YA G +E+ +++FE M +R+ +WN +IG Y
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
+ E D FKRM G + + A + + L AC + L K VH + G ++
Sbjct: 507 DENESEAFDLFKRMNLCG-IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
G++LIDMY+KCGII++A VF+S+ +++ N +I+G + + A+ LF EM G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG 624
Query: 392 EMPDGITFIGILCAC 406
P ITF I+ AC
Sbjct: 625 VNPSEITFATIVEAC 639
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 194/449 (43%), Gaps = 47/449 (10%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
QI ++ GLE++ Y ++ A+ +++ AR++F+ I D N V W +F+GY +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
V++F +M+ P+ F V+ + +++ L++ L+ ++
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR----LLFGEMSSPDVVAWN 296
Query: 140 ALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISC---------GDIVSARCLFE 190
+I + A + F M + +V S + +S G +V A + +
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI-K 355
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
L ++ + +++VS Y M A K+F+ + +K+ + WN M+ GYA+NG+ + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F +M GY +D T ++LS CA
Sbjct: 416 FMDMKS----------SGYN----------------------IDDFTFTSLLSTCAASHD 443
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L+ H N+ VGNAL+DMYAKCG +E+A +F M +D +TWNTII
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
+ A LF M G + DG L ACTH+ + +G +++ +
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDR 562
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMP 459
+ ++D+ ++ G + +A +P
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 32/297 (10%)
Query: 212 NMIEARKLFDQMPKKDVISW----------------------NTMLSGYANNGDVEECKR 249
+ ++RK+FD+MP++ ++ N ++ YA V ++
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
F+ + E++V +WN ++ Y++ G +VL +F + E ++FPN T VLS CAR
Sbjct: 117 QFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF-ENQIFPNKFTFSIVLSTCARET 174
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
++F + +H G + N G AL+DMYAKC I +A VF + + + W + S
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
G G A+ +F M++ G PD + F+ ++ +G +++ F M+
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----S 289
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDF---VKRMPIEADAVIWANLLGSCRVYKNVELA 483
P + + M+ + G A+++ +++ +++ ++L + + N++L
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 289/531 (54%), Gaps = 37/531 (6%)
Query: 15 TKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
T L + Q++ G+ S + ++++ + LK Y+ +F ++N NA+ G
Sbjct: 42 TASLRHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRG 100
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
+N + V F M +L P+ TFP VLKS K+ G LH LKN +
Sbjct: 101 LTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCD 160
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
FV +L+++Y+ ++ A++VF E +P+
Sbjct: 161 SFVRLSLVDMYAKTGQLKHAFQVF-------------------------------EESPD 189
Query: 195 R----DVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRL 250
R +++WN +++GY ++M A LF MP+++ SW+T++ GY ++G++ K+L
Sbjct: 190 RIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQL 249
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
FE MPE+NV SW LI G++ G + + + ML +G + PN+ TI VLSAC++ GA
Sbjct: 250 FELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG-LKPNEYTIAAVLSACSKSGA 308
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L +H Y NG + + +G AL+DMYAKCG ++ A VF++M+ KD+++W +I G
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVP 430
A+HGR A+ F +M +GE PD + F+ +L AC + V+ GL++F SM +DY+I P
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 431 QIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERL 490
++HY +VDLL RAG+L EA + V+ MPI D WA L +C+ +K AE + L
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNL 488
Query: 491 TELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
EL+P+ +++ L + G +DV + +++++ ++ G S IE++
Sbjct: 489 LELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELD 539
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 295/573 (51%), Gaps = 75/573 (13%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNA 70
+L K +H + +V SG + + A+ +Q+ ARK+FD++ ++++VSWN
Sbjct: 150 ELRVGKEIHGL---LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 71 MFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNG 130
+ GY+QN R + + M + + P+ T VL + + + G+E+H +++G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 131 FRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE 190
F + + + TAL+++Y+ CG + +AR LF+
Sbjct: 267 FDSLVNISTALVDMYA-------------------------------KCGSLETARQLFD 295
Query: 191 LAPERDVILWNTIVSGYIDVRNMIEARKLFDQM------P-------------------- 224
ER+V+ WN+++ Y+ N EA +F +M P
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 225 -------------KKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYAN 271
++V N+++S Y +V+ +F ++ R + SWN +I G+A
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415
Query: 272 NGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVC 331
NG + L+ F +M + V P+ T V+V++A A L +KW+H + NV
Sbjct: 416 NGRPIDALNYFSQMRSR-TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 332 VGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAG 391
V AL+DMYAKCG I A +F+ M + + TWN +I G HG G AL LF EM+
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 392 EMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
P+G+TF+ ++ AC+H GLVE GL F M +YSI ++HYG MVDLL RAGRL EA
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Query: 452 VDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGDL 511
DF+ +MP++ ++ +LG+C+++KNV AE A ERL EL P + V+L+NIY
Sbjct: 595 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAA 654
Query: 512 GRWKDVARIKVAMRDTGFKKLPGCSSIEV-NEV 543
W+ V +++V+M G +K PGCS +E+ NEV
Sbjct: 655 SMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 238/502 (47%), Gaps = 32/502 (6%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E+ + K L QI V +GL + + ++++ + + A ++F+ I + V ++
Sbjct: 45 ERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYH 104
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKN 129
M G+A+ + F +M+ D P + F +LK C LR G+E+H L++K+
Sbjct: 105 TMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 130 GFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG------DIV 183
GF ++F T L +Y+ + + A KVF M ER++V W +++ GY G ++V
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 184 SARCLFELAPERDVILWNTIVS--------GYIDVRNMIEA---RKLFDQMPKKDVISWN 232
+ C L P + TIVS I V I R FD + V
Sbjct: 225 KSMCEENLKPS-----FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL----VNIST 275
Query: 233 TMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
++ YA G +E ++LF+ M ERNV SWN +I Y N E + F++ML EG V
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VK 334
Query: 293 PNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDV 352
P D +++ L ACA LG L+ +++H + G NV V N+LI MY KC ++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 353 FNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLV 412
F + ++ L++WN +I G A +GR AL+ F +M++ PD T++ ++ A + +
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 413 EEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLG 472
+ + M + + +VD+ A+ G + A + M E W ++
Sbjct: 455 HHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMID 512
Query: 473 SCRVYKNVELAELALERLTELE 494
Y + ALE E++
Sbjct: 513 G---YGTHGFGKAALELFEEMQ 531
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 286/509 (56%), Gaps = 21/509 (4%)
Query: 44 CAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTF 103
C ++K A K+F+ IT +NVV W +M GY +N+ +VLF +M++ + + N +T+
Sbjct: 189 CGEIKS---AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Query: 104 PIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDE 163
++ +C K++AL +G+ H ++K+G + + T+L+++Y I A +VF E
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305
Query: 164 RNVVVWTSMINGYISCGDIVSARCLF------ELAPERDVILWNTIVSGYIDVRNMIEAR 217
++V+WT+MI GY G + A LF E+ P + + +++SG + N+ R
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP--NCVTIASVLSGCGLIENLELGR 363
Query: 218 KLFDQMPKKDVISWNT-----MLSGYANNGDVEECKRLFEEMPERNVFSWNGLIGGYANN 272
+ K + W+T ++ YA + K +FE E+++ +WN +I G++ N
Sbjct: 364 SVHGLSIKVGI--WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQN 421
Query: 273 GLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGY--QGNV 330
G E L F RM +E V PN T+ ++ SACA LG+L +H Y+ G+ +V
Sbjct: 422 GSIHEALFLFHRMNSES-VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 331 CVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEMKNA 390
VG AL+D YAKCG ++A +F++++ K+ ITW+ +I G G G+L LF EM
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 391 GEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGRLAE 450
+ P+ TF IL AC H G+V EG YF SM DY+ P +HY CMVD+LARAG L +
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 451 AVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNIYGD 510
A+D +++MPI+ D + L C ++ +L E+ ++++ +L P + + +V++SN+Y
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 511 LGRWKDVARIKVAMRDTGFKKLPGCSSIE 539
GRW ++ M+ G K+ G S++E
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/549 (25%), Positives = 249/549 (45%), Gaps = 17/549 (3%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
L Q + +GL I ++++ AR +FD+I + + W M Y
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCL 119
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
N+ VV L+ + K + F LK+C ++ L G+++HC ++K N+ V
Sbjct: 120 NKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-V 178
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDV 197
T L+++Y+ I++A+KVF ++ RNVV WTSMI GY+ LF E +V
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 198 I----LWNTIVSGYIDVRNMIEARKLFDQMPKKDV----ISWNTMLSGYANNGDVEECKR 249
+ + T++ + + + + + K + ++L Y GD+ +R
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEG-RVFPNDATIVTVLSACARL 308
+F E ++ W +I GY +NG E L F++M +G + PN TI +VLS C +
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM--KGVEIKPNCVTIASVLSGCGLI 356
Query: 309 GALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTII 368
L+ + VH + G + V NAL+ MYAKC +A VF KD++ WN+II
Sbjct: 357 ENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 415
Query: 369 SGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYS 427
SG + +G AL LFH M + P+G+T + AC +G + G S + S+ + +
Sbjct: 416 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 475
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSC-RVYKNVELAELA 486
+ ++D A+ G ++ + E + + W+ ++G + + EL
Sbjct: 476 ASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 487 LERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAM-RDTGFKKLPGCSSIEVNEVVM 545
E L + + N + F + + G G + + +M +D F + V+ +
Sbjct: 535 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 594
Query: 546 LGCLSRELD 554
G L + LD
Sbjct: 595 AGELEQALD 603
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 19/375 (5%)
Query: 18 LHQ---IQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNG 74
LHQ +V SG+E S + ++ + ++ AR++F++ + ++V W AM G
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 75 YAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRAN 134
Y N + LF +MK ++ PNC T VL C I L G +H L +K G +
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-D 376
Query: 135 IFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPE 194
V AL+ +Y+ A VF E+++V W S+I+G+ G I A LF
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Query: 195 RDVI--------LWNTIVS-GYIDVRNMIEARKL-FDQMPKKDVISWNTMLSGYANNGDV 244
V L++ S G + V + + A + + V +L YA GD
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDP 496
Query: 245 EECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSA 304
+ + +F+ + E+N +W+ +IGGY G L+ F+ ML + + PN++T ++LSA
Sbjct: 497 QSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQK-PNESTFTSILSA 555
Query: 305 CARLGALDFSK--WVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTK-DL 361
C G ++ K + +Y +YN + + ++DM A+ G +E A+D+ M + D+
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYN-FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 362 ITWNTIISGLAMHGR 376
+ + G MH R
Sbjct: 615 RCFGAFLHGCGMHSR 629
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 79/199 (39%), Gaps = 13/199 (6%)
Query: 301 VLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKD 360
+LS C + +L S H NG G++ + L+ +Y G ++A VF+ + D
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 361 LITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQ 420
W ++ ++ + L+ + G D I F L ACT + ++ G +
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG----K 162
Query: 421 SMAMDYSIVPQIEH--YGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYK 478
+ VP ++ ++D+ A+ G + A + + + V W +++ Y
Sbjct: 163 KIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG---YV 218
Query: 479 NVELAELALERLTELEPKN 497
+L E L + N
Sbjct: 219 KNDLCEEGLVLFNRMRENN 237
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 295/603 (48%), Gaps = 79/603 (13%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
Q +++ SG + YI+ ++I + + A + I D + S++++ + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGT 139
+ +F++M +P+ P + K C +++A + G+++HC+ +G + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 140 ALIELYSTGKAIEAAYKVFGEMDER----------------------------------- 164
++ +Y + A KVF M ++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 165 NVVVWTSMINGYIS-------------------CGDIVSARCLFELAPERDVILWNTIVS 205
N+V W +++G+ C D V+ + + +++ ++
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 206 GYIDVRNMIEAR--------------------KLFDQMPKKDVISWNTMLSGYANNGDVE 245
GY+ + +++ + LF+Q + N ++G + NG V+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 246 ECKRLFEEMPER----NVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTV 301
+ +FE E+ NV SW +I G A NG E L+ F+ M G V PN TI ++
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNHVTIPSM 394
Query: 302 LSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDL 361
L AC + AL + H +A NV VG+ALIDMYAKCG I + VFN M TK+L
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 362 ITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQS 421
+ WN++++G +MHG+ +S+F + PD I+F +L AC +GL +EG YF+
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 422 MAMDYSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVE 481
M+ +Y I P++EHY CMV+LL RAG+L EA D +K MP E D+ +W LL SCR+ NV+
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 482 LAELALERLTELEPKNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVN 541
LAE+A E+L LEP+NP +V+LSNIY G W +V I+ M G KK PGCS I+V
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 542 EVV 544
V
Sbjct: 635 NRV 637
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 191/466 (40%), Gaps = 86/466 (18%)
Query: 11 QLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQ------- 63
+L K QI SGL+ ++ + + +M ARK+FD+++D+
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187
Query: 64 ----------------------------NVVSWNAMFNGYAQNEFHRTVVVLFTQMKKLD 95
N+VSWN + +G+ ++ +H+ VV+F ++ L
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 96 AMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFVGTALIELYSTGKAIEAAY 155
P+ T VL S L G +H V+K G + V +A+I++Y +
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 156 KVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPER----DVILWNTIVSGYIDVR 211
+F + + V + I G G + A +FEL E+ +V+ W +I++G
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 212 NMIEARKLFDQMP----KKDVISWNTMLSG------------------------------ 237
IEA +LF +M K + ++ +ML
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427
Query: 238 -----YANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVF 292
YA G + + +F MP +N+ WN L+ G++ +G EV+ F+ ++ R+
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM-RTRLK 486
Query: 293 PNDATIVTVLSACARLGALDFS-KWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVD 351
P+ + ++LSAC ++G D K+ + +E G + + + ++++ + G ++ A D
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 352 VFNSMD-TKDLITWNTIISGLAMHGR----GAGALSLFH-EMKNAG 391
+ M D W +++ + A LFH E +N G
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG 592
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 295/539 (54%), Gaps = 16/539 (2%)
Query: 16 KHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGY 75
+ LH T++ G ++ I ++ A+ + A F + +NVV WN M Y
Sbjct: 409 QQLHAYTTKL---GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 76 AQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANI 135
+ R +F QM+ + +PN +T+P +LK+C+++ L GE++H ++K F+ N
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 136 FVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG----DIVSARCLFEL 191
+V + LI++Y+ ++ A+ + ++VV WT+MI GY + + R + +
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMP----KKDVISWNTMLSGYANNGDVEEC 247
D + VS ++ + E +++ Q D+ N +++ Y+ G +EE
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACAR 307
FE+ + +WN L+ G+ +G E L F RM EG + N+ T + + A +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASE 704
Query: 308 LGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTI 367
+ K VH GY V NALI MYAKCG I +A F + TK+ ++WN I
Sbjct: 705 TANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAI 764
Query: 368 ISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYS 427
I+ + HG G+ AL F +M ++ P+ +T +G+L AC+H+GLV++G++YF+SM +Y
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 428 IVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ P+ EHY C+VD+L RAG L+ A +F++ MPI+ DA++W LL +C V+KN+E+ E A
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884
Query: 488 ERLTELEPKNPANFVMLSNIYGDLGRW--KDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L ELEP++ A +V+LSN+Y +W +D+ R K M++ G KK PG S IEV +
Sbjct: 885 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK--MKEKGVKKEPGQSWIEVKNSI 941
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 243/527 (46%), Gaps = 24/527 (4%)
Query: 18 LHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
+ QI +++ GL S + +I ++ + AR++FD + ++ SW AM +G ++
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
NE + LF M L MP + F VL +C KI +L GE+LH LVLK GF ++ +V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE------L 191
AL+ LY + +A +F M +R+ V + ++ING CG A LF+ L
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 192 APERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWN----TMLSGYANNGDVEEC 247
P+ + L + +V+ D + ++L K S N +L+ YA D+E
Sbjct: 386 EPDSNT-LASLVVACSAD-GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 248 KRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFK--RMLTEGRVFPNDATIVTVLSAC 305
F E NV WN ++ Y GL ++ ++F+ R + + PN T ++L C
Sbjct: 444 LDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 306 ARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWN 365
RLG L+ + +H +Q N V + LIDMYAK G ++ A D+ KD+++W
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 366 TIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMD 425
T+I+G + AL+ F +M + G D + + AC + ++EG + A
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACV 619
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEA-DAVIWANLLGSCRVYKNVELAE 484
+ +V L +R G++ E+ ++ EA D + W L+ + N E A
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEES--YLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 485 LALERLTELEPKNPANFVMLSNIYG--DLGRWKDVARIKVAMRDTGF 529
R+ E + NF S + + K ++ + TG+
Sbjct: 678 RVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 203/430 (47%), Gaps = 33/430 (7%)
Query: 90 QMKKLDAM------PNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVGTALI 142
Q K++D++ PN T +L+ C+K N +L EG +LH +LK G +N + L
Sbjct: 68 QEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLF 127
Query: 143 ELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVILWNT 202
+ Y + A+KVF EM ER + W MI S I LF +V
Sbjct: 128 DFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEG 187
Query: 203 IVSGYI----------DVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFE 252
SG + DV I AR L+ + V+ N ++ Y+ NG V+ +R+F+
Sbjct: 188 TFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFD 246
Query: 253 EMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALD 312
+ ++ SW +I G + N E + F M G + P +VLSAC ++ +L+
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLE 305
Query: 313 FSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLA 372
+ +H G+ + V NAL+ +Y G + +A +F++M +D +T+NT+I+GL+
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 373 MHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQ 431
G G A+ LF M G PD T ++ AC+ G + G + + + ++ +
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 432 IEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIW----------ANLLGSCRVYKNVE 481
IE G +++L A+ + A+D+ +E + V+W +L S R+++ ++
Sbjct: 426 IE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 482 LAELALERLT 491
+ E+ + T
Sbjct: 483 IEEIVPNQYT 492
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 221/470 (47%), Gaps = 18/470 (3%)
Query: 20 QIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNE 79
++ +Q++ GL+ + ++ ++ + A K+FD++ ++ + +WN M A
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 80 FHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKIN-ALREGEELHCLVLKNGFRANIFVG 138
V LF +M + PN TF VL++C + A E++H +L G R + V
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 139 TALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFELAPERDVI 198
LI+LYS ++ A +VF + ++ W +MI+G A LF ++
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 199 LWNTIVSGYIDVRNMIEARKLFDQMP--------KKDVISWNTMLSGYANNGDVEECKRL 250
S + IE+ ++ +Q+ D N ++S Y + G++ + +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 251 FEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGA 310
F M +R+ ++N LI G + G + ++ FKRM +G + P+ T+ +++ AC+ G
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGT 404
Query: 311 LDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
L + +H Y G+ N + AL+++YAKC IE A+D F + ++++ WN ++
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIV 429
+ + +F +M+ +P+ T+ IL C +G +E G + Q + ++
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--- 521
Query: 430 PQIEHYGC--MVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVY 477
Q+ Y C ++D+ A+ G+L A D + R + D V W ++ Y
Sbjct: 522 -QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQY 569
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 206/453 (45%), Gaps = 19/453 (4%)
Query: 10 EQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWN 69
E LE + LH + V+ G Y+ +++ L + A +F ++ ++ V++N
Sbjct: 302 ESLEIGEQLHGL---VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 70 AMFNGYAQNEFHRTVVVLFTQMKKLDAM-PNCFTFPIVLKSCVKINALREGEELHCLVLK 128
+ NG +Q + + LF +M LD + P+ T ++ +C L G++LH K
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 129 NGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCL 188
GF +N + AL+ LY+ IE A F E + NVV+W M+ Y D+ ++ +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 189 F------ELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK----DVISWNTMLSGY 238
F E+ P + + +I+ I + ++ ++ Q+ K + + ++ Y
Sbjct: 478 FRQMQIEEIVPNQ--YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 239 ANNGDVEECKRLFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATI 298
A G ++ + ++V SW +I GY + L F++ML G + ++ +
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGL 594
Query: 299 VTVLSACARLGALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDT 358
+SACA L AL + +H A +G+ ++ NAL+ +Y++CG IE + F +
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 359 KDLITWNTIISGLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSY 418
D I WN ++SG G AL +F M G + TF + A + +++G
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG-KQ 713
Query: 419 FQSMAMDYSIVPQIEHYGCMVDLLARAGRLAEA 451
++ + E ++ + A+ G +++A
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%)
Query: 12 LETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAM 71
L+ K QI Q SG ++T ++ ++ + F++ + ++WNA+
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 72 FNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGF 131
+G+ Q+ + + +F +M + N FTF +K+ + +++G+++H ++ K G+
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 132 RANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCG 180
+ V ALI +Y+ +I A K F E+ +N V W ++IN Y G
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 293/575 (50%), Gaps = 50/575 (8%)
Query: 17 HLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYA 76
H+ Q+ ++V ++ +++ ++I+ + + A +FD+IT +N S+NA+ Y
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 77 QNEFHRTVVVLFTQ------MKKLDAMPNCFTFPIVLKSCVKINALREG---EELHCLVL 127
E + LF A P+ + VLK+ + G ++H V+
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 128 KNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGY----------- 176
+ GF +++FVG +I Y+ IE+A KVF EM ER+VV W SMI+GY
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 177 -----ISCGDI---------------VSARCLFELAPER---------DVILWNTIVSGY 207
++C D S+ +F L + D+ L N ++ Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 208 IDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEEMPERNVFSWNGLIG 267
++ AR LFD+M +KD +++ ++SGY +G V+E LF EM + +WN +I
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 268 GYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAEYNGYQ 327
G N EV+++F+ M+ G PN T+ ++L + L K +H +A NG
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSR-PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 328 GNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALSLFHEM 387
N+ V ++ID YAK G + A VF++ + LI W II+ A+HG A SLF +M
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 388 KNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIVPQIEHYGCMVDLLARAGR 447
+ G PD +T +L A H G + F SM Y I P +EHY CMV +L+RAG+
Sbjct: 459 QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGK 518
Query: 448 LAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALERLTELEPKNPANFVMLSNI 507
L++A++F+ +MPI+ A +W LL V ++E+A A +RL E+EP+N N+ +++N+
Sbjct: 519 LSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANL 578
Query: 508 YGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNE 542
Y GRW++ ++ M+ G KK+PG S IE +
Sbjct: 579 YTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEK 613
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 8 HSEQLETTKHLHQIQTQVVTSGLEKSDYITPRIITACAQLKQMTYARKMFDKITDQNVVS 67
+S L+ K +H + +G + + Y+T II A+L + A+++FD D+++++
Sbjct: 378 YSSNLKGGKEIHAF---AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA 434
Query: 68 WNAMFNGYAQNEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEEL-HCLV 126
W A+ YA + + LF QM+ L P+ T VL + + + ++
Sbjct: 435 WTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSML 494
Query: 127 LKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVV-VWTSMINGYISCGDIVSA 185
K + ++ + S + A + +M + VW +++NG GD+ A
Sbjct: 495 TKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIA 554
Query: 186 R--C--LFELAPE 194
R C LFE+ PE
Sbjct: 555 RFACDRLFEMEPE 567
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 294/536 (54%), Gaps = 12/536 (2%)
Query: 20 QIQTQVVTSGLEKSDYITPR--IITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQ 77
Q+ V G + + ++T ++ + +++++ A +F++I +++ V++N + GY +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 78 NEFHRTVVVLFTQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRANIFV 137
+ + + LF +M++ P+ FTF VLK+ V ++ G++LH L + GF + V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 138 GTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSARCLFE----LAP 193
G +++ YS + +F EM E + V + +I+ Y ++ F +
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQ--MPKKDVI--SWNTMLSGYANNGDVEECKR 249
+R + T++S ++ ++ R+L Q + D I N+++ YA EE +
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 250 LFEEMPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLG 309
+F+ +P+R SW LI GY GL L F +M + + +T TVL A A
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFA 466
Query: 310 ALDFSKWVHVYAEYNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIIS 369
+L K +H + +G NV G+ L+DMYAKCG I++AV VF M ++ ++WN +IS
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 370 GLAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLSYFQSMAMDYSIV 429
A +G G A+ F +M +G PD ++ +G+L AC+H G VE+G YFQ+M+ Y I
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 430 PQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELALER 489
P+ +HY CM+DLL R GR AEA + MP E D ++W+++L +CR++KN LAE A E+
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 490 LTELEP-KNPANFVMLSNIYGDLGRWKDVARIKVAMRDTGFKKLPGCSSIEVNEVV 544
L +E ++ A +V +SNIY G W+ V +K AMR+ G KK+P S +EVN +
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKI 702
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 179/407 (43%), Gaps = 51/407 (12%)
Query: 126 VLKNGFRANIFVGTALIELYSTGKAIEAAYKVFGEMDERNVVVWTSMINGYISCGDIVSA 185
++K GF + ++E + AA KV+ EM +N V +MI+G++ GD+ SA
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 186 RCLFELAPERDVILWNTIVSGYIDVRNMIEARKLFDQMPKK------DVISWNTMLSGYA 239
R LF+ P+R V+ W ++ Y + EA KLF QM + D +++ T+L G
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 240 NN------GDVE-------------------------ECKR------LFEEMPERNVFSW 262
+ G V E +R LFEE+PE++ ++
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTF 218
Query: 263 NGLIGGYANNGLFFEVLDAFKRMLTEGRVFPNDATIVTVLSACARLGALDFSKWVHVYAE 322
N LI GY +GL+ E + F +M G P+D T VL A L + +H +
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQ-PSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 323 YNGYQGNVCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISGLAMHGRGAGALS 382
G+ + VGN ++D Y+K + +F+ M D +++N +IS + + +L
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 383 LFHEMKNAGEMPDGITFIGILCACTHMGLVEEGLS-YFQSMAMDYSIVPQIEHYG-CMVD 440
F EM+ G F +L ++ ++ G + Q++ + I H G +VD
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVD 394
Query: 441 LLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAELAL 487
+ A+ EA K +P + V W L+ S V K + A L L
Sbjct: 395 MYAKCEMFEEAELIFKSLP-QRTTVSWTALI-SGYVQKGLHGAGLKL 439
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 143/309 (46%), Gaps = 18/309 (5%)
Query: 194 ERDVILWNTIVSGYIDVRNMIEARKLFDQMPKKDVISWNTMLSGYANNGDVEECKRLFEE 253
+ D N IV + + ARK++D+MP K+ +S NTM+SG+ GDV + LF+
Sbjct: 45 DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDA 104
Query: 254 MPERNVFSWNGLIGGYANNGLFFEVLDAFKRMLTEGR-VFPNDATIVTVLSACARLGALD 312
MP+R V +W L+G YA N F E F++M P+ T T+L C +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 313 FSKWVHVYAEYNGYQGN--VCVGNALIDMYAKCGIIENAVDVFNSMDTKDLITWNTIISG 370
VH +A G+ N + V N L+ Y + ++ A +F + KD +T+NT+I+G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 371 LAMHGRGAGALSLFHEMKNAGEMPDGITFIGILCACT-----HMGLVEEGLSYFQSMAMD 425
G ++ LF +M+ +G P TF G+L A +G LS + D
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 426 YSIVPQIEHYGCMVDLLARAGRLAEAVDFVKRMPIEADAVIWANLLGSCRVYKNVELAEL 485
S+ QI +D ++ R+ E MP E D V + ++ S Y + E
Sbjct: 285 ASVGNQI------LDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISS---YSQADQYEA 334
Query: 486 ALERLTELE 494
+L E++
Sbjct: 335 SLHFFREMQ 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,359,147
Number of Sequences: 539616
Number of extensions: 9055374
Number of successful extensions: 27963
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 18954
Number of HSP's gapped (non-prelim): 2234
length of query: 589
length of database: 191,569,459
effective HSP length: 123
effective length of query: 466
effective length of database: 125,196,691
effective search space: 58341658006
effective search space used: 58341658006
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)