Query 007810
Match_columns 589
No_of_seqs 375 out of 1657
Neff 6.1
Searched_HMMs 46136
Date Thu Mar 28 15:38:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007810.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007810hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 4E-115 8E-120 920.0 31.1 478 109-589 41-528 (571)
2 COG1621 SacC Beta-fructosidase 100.0 6.9E-94 1.5E-98 776.4 41.8 407 116-589 27-450 (486)
3 smart00640 Glyco_32 Glycosyl h 100.0 1.8E-88 4E-93 738.8 48.4 421 122-588 1-437 (437)
4 TIGR01322 scrB_fam sucrose-6-p 100.0 2E-87 4.3E-92 732.2 45.7 401 117-589 13-435 (445)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 4.6E-79 9.9E-84 636.8 26.2 299 122-440 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 1.6E-68 3.5E-73 552.2 33.0 286 128-443 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 2.8E-55 6.1E-60 450.0 30.5 266 131-433 1-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 1.5E-38 3.2E-43 322.4 27.3 242 132-405 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 1.5E-35 3.3E-40 300.2 28.0 268 131-426 1-285 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 1.5E-25 3.2E-30 236.6 25.0 193 131-342 8-255 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 5.6E-22 1.2E-26 204.7 19.4 189 121-318 4-282 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 1.5E-19 3.2E-24 187.6 20.8 184 108-318 52-246 (294)
13 cd09004 GH43_bXyl Glycosyl hyd 99.8 1.3E-18 2.8E-23 178.4 20.1 192 127-353 5-197 (275)
14 cd08993 GH43_DUF377 Glycosyl h 99.8 7.4E-19 1.6E-23 179.8 16.8 161 132-313 2-169 (268)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.7 3.5E-16 7.6E-21 160.7 22.0 186 128-344 6-200 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 3.5E-15 7.7E-20 153.0 20.5 195 132-353 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.6 4.3E-14 9.3E-19 142.8 20.6 191 132-353 2-201 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.6 2.6E-13 5.7E-18 140.3 20.9 180 132-344 2-204 (294)
19 cd08998 GH43_ABN_1 Glycosyl hy 99.5 1.3E-12 2.7E-17 135.2 20.9 129 130-275 1-137 (288)
20 cd08992 GH43_like_1 Glycosyl h 99.5 5.1E-13 1.1E-17 141.6 18.2 171 118-296 24-241 (349)
21 PF11837 DUF3357: Domain of un 99.5 3.6E-15 7.8E-20 132.8 -0.8 97 14-114 7-106 (106)
22 cd08984 GH43_5 Glycosyl hydrol 99.5 2.9E-12 6.4E-17 133.2 19.0 169 130-318 11-193 (294)
23 cd08985 GH43_6 Glycosyl hydrol 99.4 8.6E-11 1.9E-15 120.7 21.6 197 132-364 5-211 (265)
24 cd08979 GH_J Glycosyl hydrolas 99.3 2.6E-11 5.7E-16 123.0 15.3 157 108-275 38-209 (276)
25 PF04041 DUF377: Domain of unk 99.3 2E-11 4.4E-16 128.4 11.9 160 135-311 36-201 (312)
26 PF04616 Glyco_hydro_43: Glyco 99.3 4.1E-10 8.9E-15 115.3 21.1 183 128-344 8-200 (286)
27 cd09000 GH43_XYL_1 Glycosyl hy 99.3 4.2E-10 9.1E-15 116.5 20.7 168 128-318 6-186 (288)
28 cd08983 GH43_4 Glycosyl hydrol 99.2 8.5E-10 1.8E-14 114.1 21.9 170 128-318 16-195 (276)
29 cd09003 GH43_AXH_1 Glycosyl hy 99.2 6.4E-10 1.4E-14 116.9 20.8 186 128-343 7-215 (311)
30 PF08244 Glyco_hydro_32C: Glyc 99.2 1E-10 2.2E-15 99.8 10.3 73 508-588 9-86 (86)
31 cd08992 GH43_like_1 Glycosyl h 99.2 1.2E-09 2.5E-14 116.3 18.8 189 110-317 86-309 (349)
32 cd08981 GH43_2 Glycosyl hydrol 99.1 6E-09 1.3E-13 108.6 19.6 135 128-274 4-142 (291)
33 cd08988 GH43_ABN Glycosyl hydr 99.0 1.8E-08 3.8E-13 104.2 20.3 130 131-275 1-139 (279)
34 cd08989 GH43_XYL Glycosyl hydr 98.9 9.7E-08 2.1E-12 98.3 20.0 125 128-274 6-136 (269)
35 cd08993 GH43_DUF377 Glycosyl h 98.8 2.5E-08 5.4E-13 102.2 11.6 98 193-299 3-104 (268)
36 cd09001 GH43_XYL_2 Glycosyl hy 98.8 1.7E-07 3.7E-12 96.4 17.7 169 128-343 9-191 (269)
37 cd08980 GH43_1 Glycosyl hydrol 98.8 2.6E-07 5.7E-12 95.6 18.9 187 132-353 2-204 (288)
38 cd08986 GH43_7 Glycosyl hydrol 98.8 3.2E-07 6.8E-12 94.5 17.9 130 129-274 1-150 (269)
39 cd09002 GH43_XYL_3 Glycosyl hy 98.7 2.6E-07 5.5E-12 95.8 13.8 122 128-274 13-134 (280)
40 PF02435 Glyco_hydro_68: Levan 98.7 1.2E-06 2.7E-11 94.7 18.5 183 131-318 63-309 (428)
41 cd08995 GH32_Aec43_like Glycos 98.6 1E-06 2.2E-11 90.6 17.0 152 110-275 37-200 (280)
42 COG2152 Predicted glycosylase 98.6 3E-07 6.4E-12 94.9 12.3 150 135-300 35-192 (314)
43 cd08994 GH43_like_2 Glycosyl h 98.6 2.6E-07 5.7E-12 95.6 12.1 108 131-243 81-198 (291)
44 cd08982 GH43_3 Glycosyl hydrol 98.6 2.6E-06 5.5E-11 89.2 18.8 108 131-275 4-111 (295)
45 cd08987 GH62 Glycosyl hydrolas 98.6 3.3E-06 7.1E-11 87.4 18.7 210 115-365 6-230 (303)
46 cd08978 GH_F Glycosyl hydrolas 98.5 2.8E-06 6E-11 85.8 16.1 156 127-296 56-215 (271)
47 cd08983 GH43_4 Glycosyl hydrol 98.4 1.4E-06 3.1E-11 90.1 11.5 78 238-318 4-87 (276)
48 cd08999 GH43_ABN_2 Glycosyl hy 98.4 6E-06 1.3E-10 84.9 15.9 153 131-297 63-226 (287)
49 cd08772 GH43_62_32_68 Glycosyl 98.4 1.1E-05 2.3E-10 81.9 15.9 156 128-295 58-223 (286)
50 cd08991 GH43_bXyl_2 Glycosyl h 98.3 2.4E-05 5.2E-10 81.0 16.9 154 129-296 54-227 (294)
51 cd08990 GH43_AXH_like Glycosyl 98.3 2.1E-05 4.6E-10 80.8 16.1 150 128-298 62-218 (274)
52 cd08986 GH43_7 Glycosyl hydrol 98.2 1.2E-05 2.6E-10 82.8 13.0 121 254-399 2-147 (269)
53 PF04041 DUF377: Domain of unk 98.2 5.4E-06 1.2E-10 87.5 9.6 106 187-301 29-137 (312)
54 cd08996 GH32_B_Fructosidase Gl 98.2 1.6E-05 3.5E-10 82.5 12.8 153 110-275 39-201 (298)
55 cd08998 GH43_ABN_1 Glycosyl hy 98.1 9.3E-05 2E-09 76.6 16.9 149 129-291 57-213 (288)
56 PF04616 Glyco_hydro_43: Glyco 97.9 0.00011 2.4E-09 75.2 13.3 173 110-296 40-222 (286)
57 TIGR01322 scrB_fam sucrose-6-p 97.8 0.00019 4E-09 79.4 13.5 155 110-275 62-225 (445)
58 cd09002 GH43_XYL_3 Glycosyl hy 97.8 0.00037 8E-09 72.3 13.8 68 239-318 7-74 (280)
59 cd08981 GH43_2 Glycosyl hydrol 97.8 0.00034 7.4E-09 73.1 13.6 66 252-318 4-77 (291)
60 cd08989 GH43_XYL Glycosyl hydr 97.8 0.00013 2.7E-09 75.3 9.9 78 240-343 1-87 (269)
61 cd08997 GH68 Glycosyl hydrolas 97.6 0.0011 2.3E-08 71.1 14.6 175 110-295 48-284 (349)
62 smart00640 Glyco_32 Glycosyl h 97.6 0.00051 1.1E-08 75.8 12.2 155 110-275 45-215 (437)
63 cd08988 GH43_ABN Glycosyl hydr 97.6 0.0028 6.1E-08 65.6 16.7 144 130-291 57-214 (279)
64 COG2152 Predicted glycosylase 97.6 0.0003 6.5E-09 73.1 8.9 117 177-302 12-141 (314)
65 cd09004 GH43_bXyl Glycosyl hyd 97.5 0.0023 5.1E-08 65.7 15.2 137 132-297 68-212 (275)
66 cd08980 GH43_1 Glycosyl hydrol 97.5 0.0028 6E-08 65.7 14.9 146 125-274 108-259 (288)
67 cd09001 GH43_XYL_2 Glycosyl hy 97.3 0.0055 1.2E-07 63.2 15.4 131 132-295 78-212 (269)
68 cd08985 GH43_6 Glycosyl hydrol 97.3 0.009 2E-07 61.5 16.9 146 130-299 65-215 (265)
69 cd00260 Sialidase Sialidases o 97.3 0.0075 1.6E-07 63.9 15.9 167 115-298 59-240 (351)
70 cd09003 GH43_AXH_1 Glycosyl hy 97.1 0.018 4E-07 60.7 16.4 167 112-300 55-248 (311)
71 cd09000 GH43_XYL_1 Glycosyl hy 97.0 0.022 4.7E-07 59.1 16.1 143 130-295 68-218 (288)
72 COG3507 XynB Beta-xylosidase [ 97.0 0.0078 1.7E-07 67.2 13.3 140 162-318 56-215 (549)
73 PF13088 BNR_2: BNR repeat-lik 97.0 0.024 5.2E-07 57.7 15.8 164 116-297 32-200 (275)
74 PF13088 BNR_2: BNR repeat-lik 96.2 0.078 1.7E-06 53.9 13.0 146 141-299 1-153 (275)
75 cd08982 GH43_3 Glycosyl hydrol 96.1 0.053 1.2E-06 56.9 11.8 134 127-272 88-237 (295)
76 PF03664 Glyco_hydro_62: Glyco 96.1 0.61 1.3E-05 47.6 18.4 172 120-318 13-195 (271)
77 PF00251 Glyco_hydro_32N: Glyc 96.0 0.091 2E-06 55.3 12.7 137 110-260 45-190 (308)
78 cd08987 GH62 Glycosyl hydrolas 95.5 0.4 8.7E-06 50.3 14.8 143 131-296 79-230 (303)
79 cd00260 Sialidase Sialidases o 94.1 8 0.00017 40.9 20.9 146 158-318 45-207 (351)
80 COG3940 Predicted beta-xylosid 90.4 1.5 3.4E-05 43.9 8.9 105 136-245 137-248 (324)
81 PF13859 BNR_3: BNR repeat-lik 90.3 1.1 2.4E-05 47.6 8.4 86 193-296 124-212 (310)
82 PF13810 DUF4185: Domain of un 85.0 19 0.00041 38.4 13.8 158 130-299 94-275 (316)
83 PTZ00334 trans-sialidase; Prov 80.0 11 0.00024 44.8 10.5 121 156-296 215-349 (780)
84 COG3507 XynB Beta-xylosidase [ 75.2 43 0.00092 38.3 12.9 79 125-212 86-167 (549)
85 PF13810 DUF4185: Domain of un 67.8 24 0.00052 37.6 8.6 95 198-298 102-211 (316)
86 PF15176 LRR19-TM: Leucine-ric 51.2 25 0.00053 31.4 4.2 29 29-57 10-38 (102)
87 PF02435 Glyco_hydro_68: Levan 39.9 5.8E+02 0.013 28.6 13.6 127 140-275 143-319 (428)
88 PF10898 DUF2716: Protein of u 38.0 22 0.00047 33.7 2.0 36 113-148 80-119 (143)
89 PF03664 Glyco_hydro_62: Glyco 33.6 5.8E+02 0.012 26.7 14.0 71 131-211 77-153 (271)
90 COG1621 SacC Beta-fructosidase 25.0 5.4E+02 0.012 29.3 10.6 94 137-237 107-204 (486)
91 PF12111 PNPase_C: Polyribonuc 24.0 26 0.00056 25.9 0.0 11 115-125 7-17 (39)
92 PF12273 RCR: Chitin synthesis 23.6 72 0.0016 29.3 2.9 11 140-150 81-91 (130)
93 PF11807 DUF3328: Domain of un 20.4 1.2E+02 0.0027 29.0 4.0 11 29-39 3-13 (217)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-115 Score=919.99 Aligned_cols=478 Identities=49% Similarity=0.873 Sum_probs=445.0
Q ss_pred ccccccccccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCC
Q 007810 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN 188 (589)
Q Consensus 109 ~~~~~~~w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~ 188 (589)
|++...+++||.|||||++|||||| +|++|+|||||||||.+++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 6777788999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeeeeCCCC
Q 007810 189 GVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDG 266 (589)
Q Consensus 189 Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~~g 266 (589)
|||||||+++++|..++||||...+.+|+|.+|++.|.+||.|++|.|.++||++.++ .++....||||+++|++++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999888899999999999999999999999999999988 67888999999999999999
Q ss_pred eEEEEEeeecCCeeeEEEEEeCCCCCcEEcccccccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCCc
Q 007810 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (589)
Q Consensus 267 ~w~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~~ 346 (589)
+|+|++|++.+++|.+++|+|+||++|+..+.+++....+|||||||||||..++.+|++++..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988899999999999999999999999888899999999999999999999999988888999999999999
Q ss_pred ceEEEEEEecCCCCcccCCCCCcccccceecccCcCccceeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccCcccEEE
Q 007810 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (589)
Q Consensus 347 ~~~Y~vG~~d~~~~~f~p~~~~~D~g~~~~lD~G~fYA~qtf~d~~~gRril~GW~~~~d~~~~~~~~gWag~lslPRel 426 (589)
.++|+||+||+++.+|+|++...++..++++|||+|||+|||+|..++|||+|||++||++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999889999999888877788999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCeEEecchHHHHhhhccCeeeeeEEEcCCceeeecccccceeeeeeEEEEe-eccccc-----cccccccc-C
Q 007810 427 LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSGA-----MEEGYGCS-G 499 (589)
Q Consensus 427 ~L~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~l~~g~~~~l~~~~~~~ldi~~~fel~-~~~~~~-----~~~~~~~~-~ 499 (589)
+|++..|..|.||||+|+|.||.......+..+++|+..+....++.|.|++++|++. ++.+.. .+-.+-|. .
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~ 437 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTG 437 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecccccccccCccccccceeeecC
Confidence 9998678899999999999999988777777888999999999999999999999887 443321 12346784 6
Q ss_pred CCccccccCccEEEEEEcCCCCceEEEEEEecCCCCCCeeEEEeeCCCCCCCCCccccccceEEEccCCCEEEEEEEEec
Q 007810 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVSH 579 (589)
Q Consensus 500 g~~~r~~~g~fGl~v~a~~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rSs~~~~~~~~~~g~~~pv~~~e~~~LRIlVD~ 579 (589)
+...++.+||||+.++++.+++|+|+++|.+.|...+-.+.+|.|.+|||++.+..|..+|+.++|..+++++||+||||
T Consensus 438 ~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~~d~~k~~~~afvdv~~~~~islr~LiDh 517 (571)
T KOG0228|consen 438 GSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLAEDNYKPSIGAFVDVYPHQKISLRSLIDH 517 (571)
T ss_pred CcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCccccccccccceeeEEEecCCCccchhhhhhh
Confidence 77788999999999999999999999999998865533788999999999999999999999999977899999999999
Q ss_pred -EEEEEEcCCC
Q 007810 580 -IWKTMSQGSA 589 (589)
Q Consensus 580 -~VEiF~n~G~ 589 (589)
|||+|+|+|+
T Consensus 518 sivEsyg~~G~ 528 (571)
T KOG0228|consen 518 SIVESYGNGGK 528 (571)
T ss_pred hhHHHhccCCc
Confidence 9999999996
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.9e-94 Score=776.39 Aligned_cols=407 Identities=32% Similarity=0.627 Sum_probs=324.2
Q ss_pred cccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeE
Q 007810 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (589)
Q Consensus 116 w~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSa 195 (589)
-+||.|||+||.||||||||++|++|+|||||||||+++.||+||||||+|+|||||+++|+||.|+++||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEcccCC----CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEE
Q 007810 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (589)
Q Consensus 196 vv~~dG~~~l~YTG~~~----~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~Mv 271 (589)
|+ .+|.+.+||||+.. .+.|.||+|+|+|+ .+|+|+.+|||+..|+++ +.+||||||+|. ++|+|||+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCcEEEE
Confidence 86 68999999999864 25689999999996 799998789999999887 899999998896 78999999
Q ss_pred Eeee-cCCeeeEEEEEeCCCCCcEEcccccccCCCCC-ceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCC----
Q 007810 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT---- 345 (589)
Q Consensus 272 iGa~-~~~~G~i~lY~S~Dl~~W~~~~~l~~~~~~~g-mwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~---- 345 (589)
+||+ .+.+|.|+||+|+||++|++.++|..+....| ||||||||+|+++ +.+.++++ ..+.+..
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~~~~pq--------g~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVLLFWPQ--------GLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--CceEEcce--------eeecCCCcCCC
Confidence 9998 46789999999999999999999987644444 9999999999865 34444444 3443321
Q ss_pred -cceEEEEEEecCCCCcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCC--CCCcCCCCcccCc
Q 007810 346 -KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQT 421 (589)
Q Consensus 346 -~~~~Y~vG~~d~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~--~~~~~~gWag~ls 421 (589)
....|++|.||++ +|+..... ..+||+| ||||+|||.++ ++|||++|||++|+.. .|+...||+||||
T Consensus 249 ~~~~~Y~vG~~dg~--~f~~~~~~-----~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGK--EFKLDDGQ-----FRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccc--eeEecCCC-----ceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 2467999999997 55554321 4689999 99999999996 7999999999999987 6777789999999
Q ss_pred ccEEEEEecCCCCeEEecchHHHHhhhccCeeeeeEEEcCCceeeecccccceeeeeeEEEEeecccccccccccccCCC
Q 007810 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGA 501 (589)
Q Consensus 422 lPRel~L~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~l~~g~~~~l~~~~~~~ldi~~~fel~~~~~~~~~~~~~~~~g~ 501 (589)
|||||+|+ +| +|+|+||+||++||.+...+..+.++... .+....+.+++++ +.+ .. .|.
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~~--~l~~~~~~~~~l~--~~~--~~--------~~~--- 380 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGNS--KLELPSGDAYELD--LDL--IW--------TDA--- 380 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccce--eeeccCCccEEEE--EEe--ec--------ccc---
Confidence 99999995 34 89999999999999997777777776542 3333334444332 111 11 111
Q ss_pred ccccccCccEEEEEEcCCCCceEEEEEEecCCCCCCeeEEEeeCCCCCCCCCccccccceEE--EccCCCEEEEEEEEec
Q 007810 502 IDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKV--PVLQGEKLSMRILVSH 579 (589)
Q Consensus 502 ~~r~~~g~fGl~v~a~~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rSs~~~~~~~~~~g~~~--pv~~~e~~~LRIlVD~ 579 (589)
..+|+.++.+.. .+.+.... ..+++||++| ... ...++.++ .+..+.+++||||||+
T Consensus 381 ------~~~~~~l~~~~~-----~~~~~~~~------~~l~ldR~~s---~~f-~~~~~~~r~~~~~~~~~v~l~if~D~ 439 (486)
T COG1621 381 ------TSFGLELRMGLN-----LVGYDVEN------ETLTLDRSDS---PLF-TVQDGETRECFIENGAKVHLRIFVDN 439 (486)
T ss_pred ------ceEEEEeecCcc-----eecccccc------ceEEEecccc---ccc-cccCCceeeeccCCCceEEEEEEEeC
Confidence 136777765543 23333321 1388999988 111 12233333 3334566899999999
Q ss_pred -EEEEEEcCCC
Q 007810 580 -IWKTMSQGSA 589 (589)
Q Consensus 580 -~VEiF~n~G~ 589 (589)
+||||+|+||
T Consensus 440 ssvEiF~NdGe 450 (486)
T COG1621 440 SSVEIFINDGE 450 (486)
T ss_pred CeEEEEEcCCc
Confidence 9999999996
No 3
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=1.8e-88 Score=738.77 Aligned_cols=421 Identities=49% Similarity=0.915 Sum_probs=326.2
Q ss_pred eeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCC
Q 007810 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (589)
Q Consensus 122 Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (589)
||+|+.||||||||++|++|+|||||||+|+++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 567
Q ss_pred eEEEEEcccCCC-------ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEee
Q 007810 202 QIVMLYTGSTDK-------SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (589)
Q Consensus 202 ~~~l~YTG~~~~-------~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (589)
++++||||+... ..+.|+.|.+.|+ .+|+|+++||||.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999997421 1233355555554 8999998899999777766789999999876 44799999998
Q ss_pred e-cCCeeeEEEEEeCCCCCcEEcccccccC-CCC-CceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCCcceEEE
Q 007810 275 K-IGKTGISLVYQTTDFKTYELLDEYLHAV-PGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (589)
Q Consensus 275 ~-~~~~G~i~lY~S~Dl~~W~~~~~l~~~~-~~~-gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~ 351 (589)
+ .++.|++++|+|+||++|++.+.++... ... +||||||||+|++++ ...||||.+|.......+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 7 4568999999999999999999987542 333 599999999998653 23699999998866678999
Q ss_pred EEEecCCCCcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCC-CCCcCCCCcccCcccEEEEEe
Q 007810 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE-SDDLEKGWASVQTIPRTVLYD 429 (589)
Q Consensus 352 vG~~d~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~-~~~~~~gWag~lslPRel~L~ 429 (589)
+|.|+++ .+|+|+... +...+.++|+| +|||+|||.+++.+||||||||++++.. ....+.||+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999873 479887643 22334589999 9999999999755699999999999742 222338999999999999996
Q ss_pred cCCCCeEEecchHHHHhhhccCeeeeeEEEcCCceeeecc--cccceeeeeeEEEEeecccccccccccccCCCcccccc
Q 007810 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDI--GVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAM 507 (589)
Q Consensus 430 ~~~g~~L~q~Pv~El~~LR~~~~~~~~~~l~~g~~~~l~~--~~~~~ldi~~~fel~~~~~~~~~~~~~~~~g~~~r~~~ 507 (589)
.++| +|+|+||+||++||.. .......+..+....+.. ..+.+++|+++|+... .. .
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~--------------~~-----~ 360 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS--------------GG-----A 360 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEEEeCC--------------Cc-----c
Confidence 4455 7999999999999954 233344444332211111 1334556665554320 00 1
Q ss_pred CccEEEEEEcCCCCceEEEEEEecCCCCCCeeEEEeeCCCCCCCCC-ccccccceEEEccCCCEEEEEEEEec-EEEEEE
Q 007810 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPD-VFKQVHGSKVPVLQGEKLSMRILVSH-IWKTMS 585 (589)
Q Consensus 508 g~fGl~v~a~~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rSs~~~~-~~~~~~g~~~pv~~~e~~~LRIlVD~-~VEiF~ 585 (589)
++|||.++++++.++.+.|.|+..++ .+++||++|+.... .........+++..+++++||||||+ |||||+
T Consensus 361 ~~~~l~~~~~~~~~~~~~i~~~~~~~------~l~vdR~~~~~~~~~~~~~~~~~~~~~~~~~~~~lri~vD~ssvEvf~ 434 (437)
T smart00640 361 GPFGLLVLASEDLSEQTAVYFDVSKG------TLCLDRRSSGTSNDEVFKGVRGATVPVDPGETLSLRILVDHSSVEIFA 434 (437)
T ss_pred eeEEEEEEeCCCCCceEEEEEEcCCe------EEEEecCCCCCCcccccccceeeeeecCCCCeEEEEEEEeceEEEEEe
Confidence 35899999988888899999986543 38899977653111 11111111223444678999999999 999999
Q ss_pred cCC
Q 007810 586 QGS 588 (589)
Q Consensus 586 n~G 588 (589)
|||
T Consensus 435 ndG 437 (437)
T smart00640 435 NGG 437 (437)
T ss_pred CCC
Confidence 998
No 4
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=2e-87 Score=732.19 Aligned_cols=401 Identities=29% Similarity=0.530 Sum_probs=315.1
Q ss_pred ccceeeeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEE
Q 007810 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (589)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (589)
+||+|||+|+.||||||||++|++|+|||||||+|+++.||+|+||||+|+|||||+++|+||.|+++||..|||||||+
T Consensus 13 ~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsav 92 (445)
T TIGR01322 13 WRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSAV 92 (445)
T ss_pred cCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EccCCeEEEEEcccCC----CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEE
Q 007810 197 ILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTI 272 (589)
Q Consensus 197 v~~dG~~~l~YTG~~~----~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~Mvi 272 (589)
+ .+|+++|||||+.. ...+.||+|+|.|+ .+|+|+. +|||.+++.....+||||+| |+ .+|+|||++
T Consensus 93 ~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~~ 163 (445)
T TIGR01322 93 D-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMVI 163 (445)
T ss_pred e-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEEE
Confidence 6 68999999999753 23688999999986 7999984 59998755544679999999 54 478999999
Q ss_pred eeec-CCeeeEEEEEeCCCCCcEEcccccccC----CCCC-ceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCC-
Q 007810 273 GSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT- 345 (589)
Q Consensus 273 Ga~~-~~~G~i~lY~S~Dl~~W~~~~~l~~~~----~~~g-mwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~- 345 (589)
|++. +..|++++|+|+||++|++.+.+.... ...| ||||||||+|++ ||||.+|....
T Consensus 164 g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~~ 228 (445)
T TIGR01322 164 GAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGLD 228 (445)
T ss_pred EEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEeccccC
Confidence 9874 556899999999999999999887543 2234 999999999962 45555554321
Q ss_pred ---------cceEEEEEEecCCCCcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCCCCCcCCC
Q 007810 346 ---------KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415 (589)
Q Consensus 346 ---------~~~~Y~vG~~d~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~~~~~~~g 415 (589)
..+.|++|+||..+.+|++++. ..++|+| +|||+|||.++ ++||||||||++|+...++.+.|
T Consensus 229 ~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~~ 301 (445)
T TIGR01322 229 ASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRDG 301 (445)
T ss_pred cccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccCC
Confidence 1357999999987789987642 2579999 89999999986 69999999999998877777889
Q ss_pred CcccCcccEEEEEecCCCCeEEecchHHHHhhhccCeeeeeEEEcCCceeeecccccceeeeeeEEEEeecccccccccc
Q 007810 416 WASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGY 495 (589)
Q Consensus 416 Wag~lslPRel~L~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~l~~g~~~~l~~~~~~~ldi~~~fel~~~~~~~~~~~~ 495 (589)
|+|+|||||+|.|+ +| +|+|+||+||++||.+... ..+. .....+... ..+++|+++++.
T Consensus 302 W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~---~~~~-~~~~~~~~~-~~~~~l~~~~~~------------ 361 (445)
T TIGR01322 302 WAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI---NVFG-DQEHTLPGL-NGEFELILDLEK------------ 361 (445)
T ss_pred cccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc---cccc-cccccccCC-CceEEEEEEecC------------
Confidence 99999999999996 45 8999999999999986532 0111 111112111 124444333221
Q ss_pred cccCCCccccccCccEEEEEEcCCCCceEEEEEEecCCCCCCeeEEEeeCCCCCCCCCccccccceEEEccCCCEEEEEE
Q 007810 496 GCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRI 575 (589)
Q Consensus 496 ~~~~g~~~r~~~g~fGl~v~a~~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rSs~~~~~~~~~~g~~~pv~~~e~~~LRI 575 (589)
+. ...|||.+ .+. ++.+.|.|+..++ .+++||++|+....... . ..+++..+++++|||
T Consensus 362 ----~~-----~~~~~l~~-~~~--~~~~~i~~~~~~~------~l~~dr~~~~~~~~~~~-~--~~~~~~~~~~~~l~i 420 (445)
T TIGR01322 362 ----DS-----AFELGLAL-TNK--GEETLLTIDADEG------KVTLDRRSSGNLEDYGG-T--RSCPLPNTKKVSLHI 420 (445)
T ss_pred ----CC-----ccEEEEEE-eCC--CCeEEEEEECcCC------EEEEEccCCCCcCCccc-e--EEEEcCCCCeEEEEE
Confidence 00 12478887 442 4679999987643 38899998864311110 0 123444567899999
Q ss_pred EEec-EEEEEEcCCC
Q 007810 576 LVSH-IWKTMSQGSA 589 (589)
Q Consensus 576 lVD~-~VEiF~n~G~ 589 (589)
|||+ |||||+|||+
T Consensus 421 ~vD~s~vEvFvn~G~ 435 (445)
T TIGR01322 421 FIDKSSVEIFINDGE 435 (445)
T ss_pred EEECCEEEEEECCCE
Confidence 9999 9999999996
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=4.6e-79 Score=636.75 Aligned_cols=299 Identities=42% Similarity=0.850 Sum_probs=249.8
Q ss_pred eeecCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCC
Q 007810 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (589)
Q Consensus 122 Hf~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (589)
||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|++++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred eEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcC-CCceecC-CCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCe
Q 007810 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (589)
Q Consensus 202 ~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~-~nPVl~~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~ 279 (589)
+++|||||+.....|.|++|+|.|.+ .+|+|++ +||||.. |++ ...+||||+|+|. ++++|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999996654 8999998 4999985 445 7799999999987 5699999999987788
Q ss_pred eeEEEEEeCCCCCcEEcccccccCC-CCCceeeeeEEEecccCcccceeccCCCCeEEEEEeec----CCCcceEEEEEE
Q 007810 280 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 354 (589)
Q Consensus 280 G~i~lY~S~Dl~~W~~~~~l~~~~~-~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~----~~~~~~~Y~vG~ 354 (589)
|++++|+|+||++|++.+.+..... ..+||||||||+|++++. .+...+|||.+|. .....++|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999886543 345999999999997621 0224568999988 345678999999
Q ss_pred ecCCCCcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCCCC-CcCCCCcccCcccEEEEEecCC
Q 007810 355 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESD-DLEKGWASVQTIPRTVLYDNKT 432 (589)
Q Consensus 355 ~d~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~~~-~~~~gWag~lslPRel~L~~~~ 432 (589)
||..+.+|+++.. ...++|+| +|||+|||.+++++|||+||||+++++... ..+.||+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 9877789987621 14799999 699999999985569999999999987532 23689999999999999975 4
Q ss_pred CCeEEecc
Q 007810 433 GSNVVQWP 440 (589)
Q Consensus 433 g~~L~q~P 440 (589)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 56899998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=1.6e-68 Score=552.19 Aligned_cols=286 Identities=42% Similarity=0.798 Sum_probs=243.9
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~Y 207 (589)
||||||||++|++|+||||||++|.++.||+++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999876559999999
Q ss_pred cccCC---CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-CCeeeEE
Q 007810 208 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (589)
Q Consensus 208 TG~~~---~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G~i~ 283 (589)
||... ...+.|++|+|+|. +.+|+|...+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|+++
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 45799999999853 289999988998863 3345689999999664 499999999874 4578999
Q ss_pred EEEeCCCCCcEEccccc-ccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCC------cceEEEEEEec
Q 007810 284 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTYN 356 (589)
Q Consensus 284 lY~S~Dl~~W~~~~~l~-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~------~~~~Y~vG~~d 356 (589)
+|+|+||++|++.+.+. ......+|||||+||++++ ..||||..|.... ...+|++|+||
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999998874 2222335999999999973 1378888887643 34689999999
Q ss_pred CCCCcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccCcccEEEEEecCCCCe
Q 007810 357 PANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSN 435 (589)
Q Consensus 357 ~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~g~~ 435 (589)
+. +|+++.. ...++|+| +|||+|||.++ ++|||+||||++++...+..+.||+|+|||||+|.|++ ++ +
T Consensus 221 ~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~ 290 (298)
T cd08996 221 GT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-R 290 (298)
T ss_pred CC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-E
Confidence 86 5555311 14689999 89999999997 79999999999999877788999999999999999975 33 8
Q ss_pred EEecchHH
Q 007810 436 VVQWPVEE 443 (589)
Q Consensus 436 L~q~Pv~E 443 (589)
|.|+||+|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=2.8e-55 Score=449.99 Aligned_cols=266 Identities=23% Similarity=0.413 Sum_probs=219.6
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCC--CCcEEEEEEecCccCcEeccccCCC-CCccCCCcEEEeeEEEccCCeEEEEE
Q 007810 131 NDPNGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLY 207 (589)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~w--G~~~WGHA~S~DLvhW~~~p~AL~P-d~~~D~~Gv~SGSavv~~dG~~~l~Y 207 (589)
.||. ++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.| +..+|..|||||||++ .+|+++|||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 4886 899999999999999999988 8999999999999999999999988 4577889999999986 679999999
Q ss_pred cccCCC--ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-----CCee
Q 007810 208 TGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG 280 (589)
Q Consensus 208 TG~~~~--~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-----~~~G 280 (589)
||+... ..+.|++|+|.|+ .+|+|...+||+.+++++...+||||+|+|.+.+|+|||++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 997642 4688999999886 899999878998755566667899999976545799999999874 4678
Q ss_pred eEEEEEeCCCCCcEEcccccccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC-CcceEEEEEEecCCC
Q 007810 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPAN 359 (589)
Q Consensus 281 ~i~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~-~~~~~Y~vG~~d~~~ 359 (589)
++++|+|+||++|++.+.+... ....|||||++|+++ | ||||..|... .....|++|+.. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~------------g---~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG------------D---WWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC------------C---EEEEEEEeccCCCcEEEEEeCCC--C
Confidence 9999999999999999876533 234599999999996 1 7888888753 235679999622 2
Q ss_pred CcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccCcccEEEEEecCCC
Q 007810 360 DKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (589)
Q Consensus 360 ~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~g 433 (589)
+.|..... ..+| | +|||+|||.++ +||||||||++++.+.++.++||+|+|| ||+|.+. ++|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~-~~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQN-EDG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEEC-CCC
Confidence 35543221 2478 6 89999999996 8999999999999888888999999999 6778876 356
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=1.5e-38 Score=322.36 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=190.7
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCcEeccccC--CCCCccCCCcEEEeeEEEccCCeEEEEEc
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYT 208 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~-~~WGHA~S~DLvhW~~~p~AL--~Pd~~~D~~Gv~SGSavv~~dG~~~l~YT 208 (589)
||+.+. |+||||||++|.+..|+. .+||||+|+|++||++.+.+| .|...+|..+||+||++...+|+++|+||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 555544 889999999999877654 568999999999999999887 56678899999999998755599999999
Q ss_pred ccCC--CccceEEEEEeCCCCCCCcceEEEcCCCcee-----cCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-CCee
Q 007810 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (589)
Q Consensus 209 G~~~--~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl-----~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G 280 (589)
+... ...+.|++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 45788999999986 899998767754 222233456899999976533499999999874 3457
Q ss_pred eEEEEEeCCCCCcEEccccc--ccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC-CcceEEEEEEecC
Q 007810 281 ISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNP 357 (589)
Q Consensus 281 ~i~lY~S~Dl~~W~~~~~l~--~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~-~~~~~Y~vG~~d~ 357 (589)
++.+|+|+|+++|++.+.+. .......+||||++|+++ .+|+|..+... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~---------------g~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID---------------GRWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC---------------CEEEEEEEecCccCCccEEEEeccc
Confidence 88999999999999988763 222234599999999986 27888888654 4467899998876
Q ss_pred CCCcccCCCCCcccccceecccC-cCccceeEecCCCCcEEEEEeccCC
Q 007810 358 ANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 405 (589)
Q Consensus 358 ~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~ 405 (589)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455532 2367888 8999999998646999999999986
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=1.5e-35 Score=300.21 Aligned_cols=268 Identities=26% Similarity=0.391 Sum_probs=203.5
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCC----CCCccCCCcEEEeeEEEccCCeEEEE
Q 007810 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVML 206 (589)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~l~ 206 (589)
|||| +++++|+||||||++|.+ ++++|+|++|+||+||++++.+|. |..+++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999975 678999999999999999998884 67778889999999987655999999
Q ss_pred EcccCC-CccceEEEEEeCCCCCCCcceEEEcCCCceecC-CCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-CCeeeEE
Q 007810 207 YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (589)
Q Consensus 207 YTG~~~-~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G~i~ 283 (589)
||+... ...+.|++|+|+|+. ..|++...+||+.. +......++|||+|++ +++|+|||++++.. ...+.|.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~-d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFE-DDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEE-cCCCCEEEEEccccCCCCCeEE
Confidence 999753 346889999998863 45776655566543 2233456899999954 45699999998763 2356788
Q ss_pred EEEeCCCCCcEEcccc--cccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC------CcceEEEEEEe
Q 007810 284 VYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD------TKVDHYAIGTY 355 (589)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~------~~~~~Y~vG~~ 355 (589)
+++|+|+.+|+..+.. .......+++|||++|+++ .+|+|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~---------------g~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN---------------GKYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC---------------CEEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 2222344699999999986 16788777654 23456888865
Q ss_pred cCCCCcccCCCCCc-ccccceecccC-cCccceeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccCcccEEE
Q 007810 356 NPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (589)
Q Consensus 356 d~~~~~f~p~~~~~-D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GW~~~~d~~~~~~~~gWag~lslPRel 426 (589)
+ .+.|++..... -.-.....|.+ .+||+++|.++ ++|++|++|+.+++.... ...+|+++|+|||++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 3 34676543110 00011235566 79999999987 799999999998875433 567999999999986
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.94 E-value=1.5e-25 Score=236.56 Aligned_cols=193 Identities=22% Similarity=0.215 Sum_probs=138.4
Q ss_pred cCCccc-eEECCEEEEEEeeCCCC----CCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEE
Q 007810 131 NDPNGP-LFYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (589)
Q Consensus 131 NDPNG~-~y~~G~YHLFYQ~nP~~----~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l 205 (589)
-|..|- +-++|+.-+|+...|.. +.|+.+||||++|+||+||++.+. |.|+.++|..|||||||++..||+++|
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 356663 44688644999887764 468899999999999999999554 668899999999999998766799999
Q ss_pred EEcccCC----CccceEEEEEeCCCCCCCcceEEEcC--CCceecCC--------------CCCCCCCCCCCeeeeeCCC
Q 007810 206 LYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPD 265 (589)
Q Consensus 206 ~YTG~~~----~~~q~q~lA~s~D~~D~~l~~w~K~~--~nPVl~~p--------------~g~~~~~fRDP~V~w~~~~ 265 (589)
||||+.. .....|++|.+.+.. +..|.+.. ..+++.+. +.-...+||||+||..+++
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 9999853 235778888775531 12333221 12343321 1112568999999543337
Q ss_pred CeEEEEEeeecC-C---------------------------eeeEEE--EEeCCCCCcEEcccccccCCCCCceeeeeEE
Q 007810 266 GKWRLTIGSKIG-K---------------------------TGISLV--YQTTDFKTYELLDEYLHAVPGTGMWECVDFY 315 (589)
Q Consensus 266 g~w~MviGa~~~-~---------------------------~G~i~l--Y~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf 315 (589)
|+|||+++++.. . .|+|.+ ++|+|+.+|++.++|+.+......||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998632 2 255544 4778999999999998653334579999999
Q ss_pred EecccCcccceeccCCCCeEEEEEeec
Q 007810 316 PVAINGSVGLDTSATGPGIKHVLKASL 342 (589)
Q Consensus 316 ~l~~~~~~~l~~s~~g~~~k~vl~~s~ 342 (589)
+++ | ||+|..|.
T Consensus 244 ~~~------------g---k~yL~~s~ 255 (349)
T cd08997 244 FHN------------G---KYYLFTIS 255 (349)
T ss_pred EEC------------C---EEEEEEeC
Confidence 996 2 78887773
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.89 E-value=5.6e-22 Score=204.68 Aligned_cols=189 Identities=19% Similarity=0.262 Sum_probs=140.9
Q ss_pred eeeecCCCcccCCccceEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEecCcc-CcEeccccCCCC--CccCCCcEEE
Q 007810 121 FHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWT 192 (589)
Q Consensus 121 ~Hf~P~~gwmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-G~~~WGHA~S~DLv-hW~~~p~AL~Pd--~~~D~~Gv~S 192 (589)
.+|..+..++-+|. ++.. +|+||||||.+|.+.. | ....||||+|+|++ +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788888999998 6665 4899999999887644 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEcccCC-------CccceEEEEEeCCCCCCCcceEEEcCCCceecCC-C-----------------
Q 007810 193 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-R----------------- 247 (589)
Q Consensus 193 GSavv~~dG~~~l~YTG~~~-------~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p-~----------------- 247 (589)
++++. .+|+++|+||+... ...+.+++|+|.+. +.+|++. .+|||.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99976 57999999999753 12466777887663 1466664 34544220 0
Q ss_pred -------------------------------------------CCCCCCCCCCeeeeeCCCCeEEEEEeeec----CCee
Q 007810 248 -------------------------------------------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTG 280 (589)
Q Consensus 248 -------------------------------------------g~~~~~fRDP~V~w~~~~g~w~MviGa~~----~~~G 280 (589)
.....++|||+| |+ .+|+|||++++.. +..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 001245799999 66 5699999999874 3467
Q ss_pred eEEEEEeCCCCCcEEcccccc----c-CC----CCCceeeeeEE-Eec
Q 007810 281 ISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVA 318 (589)
Q Consensus 281 ~i~lY~S~Dl~~W~~~~~l~~----~-~~----~~gmwECPdlf-~l~ 318 (589)
.+.+|+|+|+++|++.+.+.. . .+ ...|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999987741 1 11 23599999999 665
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.84 E-value=1.5e-19 Score=187.65 Aligned_cols=184 Identities=21% Similarity=0.262 Sum_probs=134.7
Q ss_pred ccccc-ccccccceeeeecCCCc----ccCCccceEECCEEEEEEeeCCCCC--CCCCcEEEEEEecCccCcEeccccCC
Q 007810 108 NWTNA-MFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAMV 180 (589)
Q Consensus 108 ~~~~~-~~~w~Rp~~Hf~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~--~wG~~~WGHA~S~DLvhW~~~p~AL~ 180 (589)
..+.. +..|+|...-+.+...| +.+|. +++++|+||||||++|..+ .++.++|+||+|+||++|+..++++.
T Consensus 52 a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~ 130 (294)
T cd08984 52 ASSKDGGATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL 130 (294)
T ss_pred EEeCCCCCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc
Confidence 34445 66776655333332222 34676 7889999999999998753 34579999999999999999887632
Q ss_pred CCCccCCCcEEEeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeee
Q 007810 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (589)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (589)
+..++++++++.+.+|+++|+||+... .+.+++|.|.|+ .+|++. .+++.. ...++|+|
T Consensus 131 -----~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v- 189 (294)
T cd08984 131 -----DSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV- 189 (294)
T ss_pred -----CCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-
Confidence 245799999987667999999998633 356789999886 899985 455542 23489999
Q ss_pred eeCCCCeEEEEEeeecCCeeeEEEEEeCCCCCcEEcccccccCC---C-CCceeeeeEEEec
Q 007810 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP---G-TGMWECVDFYPVA 318 (589)
Q Consensus 261 w~~~~g~w~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~~~~---~-~gmwECPdlf~l~ 318 (589)
|+ .+|+|||+++. ..| +.+|+|+|+.+|++.+.++.... . ..+++||+++..+
T Consensus 190 ~k-~~g~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 190 FR-WKGYYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred eE-ECCEEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 44 57999999753 235 56999999999999998775321 1 2378999999764
No 13
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.81 E-value=1.3e-18 Score=178.45 Aligned_cols=192 Identities=15% Similarity=0.186 Sum_probs=137.6
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCC-CccCCCcEEEeeEEEccCCeEEE
Q 007810 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVM 205 (589)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd-~~~D~~Gv~SGSavv~~dG~~~l 205 (589)
.||++||+. ++++|+||||++....+. ....|.+++|+||+||++++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~i-~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPEI-RIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCCe-EEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 468999994 778999999998765432 25789999999999999999998764 356778999999875 6899999
Q ss_pred EEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEE
Q 007810 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (589)
Q Consensus 206 ~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY 285 (589)
+||+. +.+++|+|+|+. ..|++..++|++.+.. ....++||.|| .+.+|+|||++++. .++.++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998763 5788755678876432 23578999995 45789999999863 1222233
Q ss_pred EeCCCCCcEEcccccccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCCcceEEEEE
Q 007810 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (589)
Q Consensus 286 ~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~vG 353 (589)
-|+|+.+|+.....+ ......+.|||.+|+.+ | +++|..|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~------------G---~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGS-EITPKNYFEGPFMFKRN------------G---IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceee-eccCCCceecceEEEEC------------C---EEEEEEECCCCCCCCceEE
Confidence 468888886543332 11223489999999875 2 6777777644322234443
No 14
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.80 E-value=7.4e-19 Score=179.78 Aligned_cols=161 Identities=19% Similarity=0.216 Sum_probs=122.2
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEecc-ccCCC--CCccCCCcEEEeeEEEccCCeEEEEEc
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYT 208 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p-~AL~P--d~~~D~~Gv~SGSavv~~dG~~~l~YT 208 (589)
|| |+++++|+||||||.++.. +.++||||+|+|++||+..+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 56 5889999999999987643 56899999999999999876 34556 5678889999999875 6999999999
Q ss_pred ccCC-CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec---CCeeeEEE
Q 007810 209 GSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI---GKTGISLV 284 (589)
Q Consensus 209 G~~~-~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~---~~~G~i~l 284 (589)
+... ...+.+++|.|+|+ .+|+|.. .+ +. ...||++++....+|+|+|+..... +..+.+.+
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-------~~~~d~~~~p~~~~g~y~m~~r~~~~~~~~~~~I~l 142 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-------PNNRDGILFPEKINGKYVMLHRPFEYGGTSPPDMWL 142 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-------CCCCCEEEeeEEECCEEEEEEccccCCCCCCCcEEE
Confidence 9763 34578999999986 8999973 21 11 1347888843235899999986432 34678899
Q ss_pred EEeCCCCCcEEcccccccCCCCCceeeee
Q 007810 285 YQTTDFKTYELLDEYLHAVPGTGMWECVD 313 (589)
Q Consensus 285 Y~S~Dl~~W~~~~~l~~~~~~~gmwECPd 313 (589)
++|+|+.+|+..+.++.. ..+.||+-.
T Consensus 143 A~S~Dl~~W~~~~~~~~~--~~~~wd~~~ 169 (268)
T cd08993 143 SFSPDLVHWGNHRFVLSP--RPNHWEQLK 169 (268)
T ss_pred EECCCcCccCCCeEEecC--CCCceeece
Confidence 999999999987666533 223476543
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.73 E-value=3.5e-16 Score=160.67 Aligned_cols=186 Identities=20% Similarity=0.175 Sum_probs=129.4
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCc-cCCCcEEEeeEEEccCCeEEEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVML 206 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~-~D~~Gv~SGSavv~~dG~~~l~ 206 (589)
+.+-||. +++++|+|+||+..... ..|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 4567997 77889999999985432 67999999999999999988877654 4566789888865 68999999
Q ss_pred EcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCee---eE
Q 007810 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---IS 282 (589)
Q Consensus 207 YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G---~i 282 (589)
||+.... ..+.+++|+|.|.. ..|++.. .+++..+. .....+||.|++ +++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v~~-d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSFFT-DTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCeEE-CCCCCEEEEEeccCCCCCCCceE
Confidence 9998642 34567788887652 5798864 33333222 235679999954 468999999986532211 13
Q ss_pred EEE-EeCCCCCcEEccc-ccccC--CCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC
Q 007810 283 LVY-QTTDFKTYELLDE-YLHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (589)
Q Consensus 283 ~lY-~S~Dl~~W~~~~~-l~~~~--~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~ 344 (589)
.+. -|+|+.+|.-... ++... ....++|||.+|+.+ | +++|..|...
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~------------g---~yyl~~S~~~ 200 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG------------G---YYYLFYSAGG 200 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC------------C---EEEEEEEcCC
Confidence 232 3688888864322 22111 123489999999985 2 6788877643
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.67 E-value=3.5e-15 Score=153.04 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=137.6
Q ss_pred CCccceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCcEeccccCCCCC--ccCCCcEEEeeEEEccCCeEEEE
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVML 206 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHA~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~~dG~~~l~ 206 (589)
||. +++++|+||||.......+. +....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 887 67789999999987654432 2334689999999999999999887543 36788999999875 79999999
Q ss_pred EcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEE
Q 007810 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (589)
Q Consensus 207 YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~ 286 (589)
||+......+.+++|+|+|+. ..|++....|++...+ ......||.+++ +++|++||++++. .++.+.--
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf~-d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVFI-DDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEEE-CCCCCEEEEECCc---CCEEEEEe
Confidence 998754345667899997752 5798865455554221 235678999954 5689999999864 23444446
Q ss_pred eCCCCCcEEccccccc-----CCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCCcceEEEEE
Q 007810 287 TTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (589)
Q Consensus 287 S~Dl~~W~~~~~l~~~-----~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~vG 353 (589)
|+|+.+|+-....+.. ....+..|+|.+|+.+ .+++|..|........|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------G~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN---------------GTYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC---------------CEEEEEEECCCCcEEEEEEc
Confidence 7899999754433321 1123478999999875 27788887654334445544
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.61 E-value=4.3e-14 Score=142.79 Aligned_cols=191 Identities=23% Similarity=0.191 Sum_probs=128.1
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCC----CCCccCCCcEEEeeEEEccCCeEEEEE
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLY 207 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~l~Y 207 (589)
||. ++.++|+|||||..... ....++.++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 887 78889999999987642 234678999999999999998875 44456678899999875 579999999
Q ss_pred cccCC-CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecC--CeeeEEE
Q 007810 208 TGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLV 284 (589)
Q Consensus 208 TG~~~-~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~--~~G~i~l 284 (589)
|+... ...+.+++|+|+|+ ..|.+....+ .+. ......+||.|++ +++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~---~~~-~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKVIR---PPT-SNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccccC---cCc-cCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEEE
Confidence 99743 23467889999886 4555432111 111 1234679999954 467999999986532 2456777
Q ss_pred EEeCCCCCcEEcccc-c-ccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCCcceEEEEE
Q 007810 285 YQTTDFKTYELLDEY-L-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (589)
Q Consensus 285 Y~S~Dl~~W~~~~~l-~-~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~vG 353 (589)
+++++...|...... . .......+.|||.+|+.+ .+++|..|........|.++
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN---------------GYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEEC---------------CEEEEEEEeCCCCCCCceEE
Confidence 888765444321211 1 111233489999999975 16777777654322234444
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.56 E-value=2.6e-13 Score=140.25 Aligned_cols=180 Identities=18% Similarity=0.128 Sum_probs=124.1
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCC-ccCCCcEEEeeEEEccCCeEEEEEccc
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 210 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~l~YTG~ 210 (589)
||. +++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 887 78889999999886542 23578999999999999998887655 36778999999875 689999999987
Q ss_pred CCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCC---eeeEEEEE
Q 007810 211 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQ 286 (589)
Q Consensus 211 ~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~---~G~i~lY~ 286 (589)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.+++ +.+|+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778899998752 57877532232 21 1 3567999964 4679999999764221 24444446
Q ss_pred eCCCCCcEEccc--c--ccc--------------CCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC
Q 007810 287 TTDFKTYELLDE--Y--LHA--------------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (589)
Q Consensus 287 S~Dl~~W~~~~~--l--~~~--------------~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~ 344 (589)
+.|+.+|.-... . ... .....+-|+|.+++.+ | +++|..|...
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~------------g---~yyl~ys~~~ 204 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN------------G---RYYLTYSANH 204 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC------------C---EEEEEEECCC
Confidence 788877642110 0 000 0112378999999885 1 6777777543
No 19
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.51 E-value=1.3e-12 Score=135.15 Aligned_cols=129 Identities=22% Similarity=0.242 Sum_probs=98.8
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCC-------ccCCCcEEEeeEEEccCCe
Q 007810 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-------WYDINGVWTGSATILPDGQ 202 (589)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-------~~D~~Gv~SGSavv~~dG~ 202 (589)
+.||. +++++|+||||+... .+++++|+||+||++.+.+|.+.. ..+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46997 788999999999864 589999999999999998876543 23467899999875 6999
Q ss_pred EEEEEcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeee
Q 007810 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 203 ~~l~YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
++|+||+.... ..+.+++|+|+|+ ....|++. +||+...++......+||.++. +++|++||+.++.
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~---~~gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~ 137 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTL---PDGPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSF 137 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCC---CCCCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeec
Confidence 99999987543 3456788999775 12589874 5887654332334678999964 4689999999864
No 20
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.51 E-value=5.1e-13 Score=141.60 Aligned_cols=171 Identities=21% Similarity=0.259 Sum_probs=121.4
Q ss_pred cceeeeecCCCc-ccCCccceEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEecCccCcEeccccCCCC-
Q 007810 118 RTSFHFQPEKNW-MNDPNGPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPD- 182 (589)
Q Consensus 118 Rp~~Hf~P~~gw-mNDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wG~~~WGHA~S~DLvhW~~~p~AL~Pd- 182 (589)
.|..=+.+..+. ..||..+++.+|+|||||++... .+ .|.....+||+|+||+||+..+.+|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 444445555554 46998899999999999997531 11 1446778999999999999999888654
Q ss_pred -CccCCCcEEEeeEEEccCCeEEEEEcccCCC----ccceEEEEEeCCCCCCCcceEEEcCCCceecCCC-C--------
Q 007810 183 -QWYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR-H-------- 248 (589)
Q Consensus 183 -~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~----~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~-g-------- 248 (589)
..||..++|..+++ ..+|+++|+|++.... ..+.+++|+|.++. ..|++. .+||+.+.. +
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 35899999999987 4799999999975321 23567999998762 469986 689986521 1
Q ss_pred ---------CCCCCCCCCeeeeeCCCCeEEEEEeeecC--------CeeeEEEEEeCCCC-CcEEc
Q 007810 249 ---------IGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 296 (589)
Q Consensus 249 ---------~~~~~fRDP~V~w~~~~g~w~MviGa~~~--------~~G~i~lY~S~Dl~-~W~~~ 296 (589)
++...+.||.|+ + .+|+|||++.+... ..-++.|..|+++. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 334457899995 3 58999999865321 11246677888864 46543
No 21
>PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides. ; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B.
Probab=99.48 E-value=3.6e-15 Score=132.82 Aligned_cols=97 Identities=41% Similarity=0.621 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH-HhhcCCCCCCCCC--CCCCCCCCCCCCCCCCCCccc
Q 007810 14 YPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI-INQTQKPLPSQNN--IVPTSKPTSFSNPEPRGVAEG 90 (589)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (589)
|+|||+.+.+... ++.++||++|++++|+++++||++||+++ ++.++. +.... .......++...+.|||+++|
T Consensus 7 Y~PLP~~~~~~~~-~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~SRGv~~G 83 (106)
T PF11837_consen 7 YTPLPDSSESAPG-PGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQS--PDGSSVSSSSPPPSPETATPVSRGVSEG 83 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCcccCC-CCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccCC--CCccccccCCCCCCCccccCCCCCcccC
Confidence 9999975554432 24556888899999999999999999998 222211 11111 122334445555689999999
Q ss_pred ccccccccccccccCCCccccccc
Q 007810 91 VSAKSNSHLLRNIKGSYNWTNAMF 114 (589)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ 114 (589)
||||++....+. ..+|||+|+||
T Consensus 84 VSEKS~~~~~~~-~~~FpWtNaML 106 (106)
T PF11837_consen 84 VSEKSNGAGSGA-GNSFPWTNAML 106 (106)
T ss_dssp --------------------HHHH
T ss_pred cccccccCccCC-CCCCCCccccC
Confidence 999998874444 67899999997
No 22
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.46 E-value=2.9e-12 Score=133.16 Aligned_cols=169 Identities=18% Similarity=0.231 Sum_probs=118.9
Q ss_pred ccCCccceEE--CCEEEEEEee-C---CCC-CCCC-CcEEEEEEecC-ccCcEeccccCCCCCccCCCcEEEeeEEEccC
Q 007810 130 MNDPNGPLFY--KGWYHLFYQY-N---PDS-AVWG-NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD 200 (589)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wG-~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~d 200 (589)
.-||. ++++ +|+|||||.. . |.. ..|. ...+|+|+|+| |+||+.++.++.++..+....+|.++++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 68998 7777 7899999942 1 111 2343 25799999999 99999998777665555667799999875 68
Q ss_pred CeEEEEEcccCC-----CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeee
Q 007810 201 GQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 201 G~~~l~YTG~~~-----~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
|+++||||.... ......++|+|+|+ .+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 12356788999885 7899853 33211 1245799995 44679999998643
Q ss_pred cCCeeeEEEEEeCCCCCcEEcccccccCCCCCceeeeeEEEec
Q 007810 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (589)
Q Consensus 276 ~~~~G~i~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~ 318 (589)
. ....+.+..|+|+.+|+..+.++. ...-|+|.+|+.+
T Consensus 156 ~-~~~~~~~a~s~D~~~w~~~~~~i~----~~~~EgP~v~k~~ 193 (294)
T cd08984 156 R-RGSTTYAADSEDLYHWTVEGPVLG----DRPHEGPNVFRWK 193 (294)
T ss_pred C-CCeEEEEEECCCCCEEEeCCcccc----CCCCCCCCeeEEC
Confidence 2 222356678999999998665442 1134899998864
No 23
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.36 E-value=8.6e-11 Score=120.68 Aligned_cols=197 Identities=18% Similarity=0.104 Sum_probs=130.7
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCC----ccCCCcEEEeeEEEcc-CCeEEEE
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVML 206 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~----~~D~~Gv~SGSavv~~-dG~~~l~ 206 (589)
|| ++++++|+|++|-.+...+..+ ...|-..+|+||+||+.++.||.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~~-~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDTA-FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCcc-cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 44 3788899999998775432111 24577889999999999999998764 3455679999987643 6999999
Q ss_pred EcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEE
Q 007810 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (589)
Q Consensus 207 YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY 285 (589)
|++...+ ....+++|+|++.. ..|+... .+. +.+ ...|||.||+ ++||++||++++..+. .+.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~-DdDG~~Yl~~~~~~~~--~i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV-DDDGTAYLLYSDRDNS--DLYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE-cCCCCEEEEEecCCCC--ceEEE
Confidence 9986432 34678899997653 5687642 222 222 4679999965 5789999999875322 23445
Q ss_pred E-eCCCCCcEEcccccccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC---CcceEEEEEEecCCCCc
Q 007810 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD---TKVDHYAIGTYNPANDK 361 (589)
Q Consensus 286 ~-S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~---~~~~~Y~vG~~d~~~~~ 361 (589)
+ ++|+..+.- .... .......|||.+|+.+ .+++|..|... .....|++.+ + -.+.
T Consensus 149 ~L~~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~---------------g~YYL~~S~~t~~~~~~~~y~~s~-s-~~GP 208 (265)
T cd08985 149 RLTDDYLSVTG--EVTT-VFVGAGREAPAIFKRN---------------GKYYLLTSGLTGWNPNDARYATAT-S-ILGP 208 (265)
T ss_pred EeCCCcccccc--eEEE-ccCCCccccceEEEEC---------------CEEEEEEccCCCccCCceEEEEec-C-CCCC
Confidence 4 367777642 2221 1123478999999985 27888877542 2345677764 1 1245
Q ss_pred ccC
Q 007810 362 WTP 364 (589)
Q Consensus 362 f~p 364 (589)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 653
No 24
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.32 E-value=2.6e-11 Score=122.98 Aligned_cols=157 Identities=21% Similarity=0.274 Sum_probs=107.7
Q ss_pred cccccccccccceeee--ecC----CCcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCC
Q 007810 108 NWTNAMFTWQRTSFHF--QPE----KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180 (589)
Q Consensus 108 ~~~~~~~~w~Rp~~Hf--~P~----~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~ 180 (589)
..+.....|+|..--+ .|. .+.+-||. +++.+ |+|||||..+... ......+++|+|+|++||+..+..+.
T Consensus 38 a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~ 115 (276)
T cd08979 38 ASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPV 115 (276)
T ss_pred EEcCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcc
Confidence 3345556666554333 122 24466887 56677 9999999976532 23357899999999999999876542
Q ss_pred -------CCCccCCCcEEEeeEEEccC-CeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCC
Q 007810 181 -------PDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252 (589)
Q Consensus 181 -------Pd~~~D~~Gv~SGSavv~~d-G~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~ 252 (589)
+...++...+.+++++.+++ |+++|+|++........+.+|.|.|+ .+|++....+ ....+....
T Consensus 116 ~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~ 188 (276)
T cd08979 116 PRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDG 188 (276)
T ss_pred eeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCC
Confidence 22334556788999876544 89999999876544577889999986 8999864332 112222345
Q ss_pred CCCCCeeeeeCCCCeEEEEEeee
Q 007810 253 DFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 253 ~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
.+.+|.++ + .+|+|+|++.+.
T Consensus 189 ~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 189 QLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred cCccceEE-E-ECCEEEEEEEec
Confidence 78899994 3 469999998865
No 25
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.28 E-value=2e-11 Score=128.36 Aligned_cols=160 Identities=23% Similarity=0.247 Sum_probs=110.5
Q ss_pred cceEECCE--EEEEEeeCCCCCCCCCcEEEEEEecCccCcEecc-ccCCCCCccCCCcEEEeeEEEccCCeEEEEEcccC
Q 007810 135 GPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (589)
Q Consensus 135 G~~y~~G~--YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~ 211 (589)
|++.++|. |||+|...- ...+..+.|.|.|+|.+||+..+ ++|.|+..|+..||....++. .+|+++|+||+.+
T Consensus 36 gai~~~~~~R~~l~yr~~~--~~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYG--SDIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEE--SSSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeEC--CCCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 45656665 888886542 22223489999999999999886 789999999999999999985 5889999999987
Q ss_pred CCccceEEEEEeCCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEEeC
Q 007810 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (589)
Q Consensus 212 ~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~S~ 288 (589)
... ..+++|+|+|. .+|+|.. +++.+.. ......-||-..|-...+|+|+|+.+ .+.+.+..|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 543 56799999997 8999984 2222111 01111225655543346899999987 3457788999
Q ss_pred CCCCcEEcccccccCCCCCceee
Q 007810 289 DFKTYELLDEYLHAVPGTGMWEC 311 (589)
Q Consensus 289 Dl~~W~~~~~l~~~~~~~gmwEC 311 (589)
|+++|+.....+.+ ...++||+
T Consensus 180 Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB---STTSSCS
T ss_pred Cccccccccccccc-CCCCcChh
Confidence 99999876553322 23457887
No 26
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.27 E-value=4.1e-10 Score=115.29 Aligned_cols=183 Identities=20% Similarity=0.194 Sum_probs=124.4
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccC--CCcE-EEeeEEEccCCeEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--INGV-WTGSATILPDGQIV 204 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D--~~Gv-~SGSavv~~dG~~~ 204 (589)
+..-||. ++.++|.|+||+...... ..+..++|+||+||+..+.++.+....+ ..+. |.++++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5668998 888999999999876543 4578999999999999997776654322 3333 999987 4799999
Q ss_pred EEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCC--eeeE
Q 007810 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGIS 282 (589)
Q Consensus 205 l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~--~G~i 282 (589)
|+|+.........+++|++++.. ..|+... .+++. ...-.||.+++ +++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~-d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFV-DDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEE-ETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEE-ecCCCcEEeCcccCCCccceeE
Confidence 99993333345668899998763 6888753 22222 23557999965 4679999999876332 2344
Q ss_pred EEEE-eCCCCCcEEcc-ccc-ccC--CCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCC
Q 007810 283 LVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (589)
Q Consensus 283 ~lY~-S~Dl~~W~~~~-~l~-~~~--~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~ 344 (589)
.+.+ ++|...+.... ... ... ...+.-|+|-+|..+ | +++|..|...
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~------------g---~yYl~~s~~~ 200 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG------------G---KYYLFYSAGG 200 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET------------T---EEEEEEEESG
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcC------------C---CEEEEEeccC
Confidence 4444 46676666544 222 211 134578999999985 1 6777777543
No 27
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.26 E-value=4.2e-10 Score=116.49 Aligned_cols=168 Identities=21% Similarity=0.197 Sum_probs=109.5
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCc--c----CCCcEEEeeEEEccCC
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--Y----DINGVWTGSATILPDG 201 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~--~----D~~Gv~SGSavv~~dG 201 (589)
+.+-||. ++.++|.|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677998 88889999998532211 134789999999999999988754321 1 345799999875 699
Q ss_pred eEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecC----
Q 007810 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---- 277 (589)
Q Consensus 202 ~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~---- 277 (589)
+++|+|++........+++|.+++.. ..|+. |++.. ...+||.||+ +++|++||+.+....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998753333456788887653 45652 33321 2568999965 478999999876421
Q ss_pred -CeeeEEEEEeCCCCCcEEccccc--ccCCCCCceeeeeEEEec
Q 007810 278 -KTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVA 318 (589)
Q Consensus 278 -~~G~i~lY~S~Dl~~W~~~~~l~--~~~~~~gmwECPdlf~l~ 318 (589)
..+.+.+.+. |...|+..+... .........|+|.+|+.+
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~ 186 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD 186 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC
Confidence 1233444433 334455444321 111122468999999875
No 28
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.25 E-value=8.5e-10 Score=114.09 Aligned_cols=170 Identities=14% Similarity=0.107 Sum_probs=112.9
Q ss_pred CcccCCccceEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEcc-CCeE
Q 007810 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQI 203 (589)
Q Consensus 128 gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-G~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~-dG~~ 203 (589)
+-+.||. +++. +|+||||+.-.-....+ +.....+++|+||+||+..+.++.... ...++|...++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4567998 6666 89999999865322222 346789999999999999887643221 24568999988654 7999
Q ss_pred EEEEcccCCC---ccceEEE--EEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCC
Q 007810 204 VMLYTGSTDK---SVQVQNL--AYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (589)
Q Consensus 204 ~l~YTG~~~~---~~q~q~l--A~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~ 278 (589)
+|+|+..... ....+++ |.+.|. .+|+.. .|++.+ + ....|+.++ + .+|+|||+.....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~p--~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTEP--KVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCcc-----cccCCC--eEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC-
Confidence 9999987532 1222333 333354 688752 456542 2 356899985 3 35999999864322
Q ss_pred eeeEEEEEeCCCC-CcEEcccccccCCCCCceeeeeEEEec
Q 007810 279 TGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVA 318 (589)
Q Consensus 279 ~G~i~lY~S~Dl~-~W~~~~~l~~~~~~~gmwECPdlf~l~ 318 (589)
..+.+.+|++|. .|+...... .......|-|.+|+..
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~ 195 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLN 195 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEEC
Confidence 346677899876 676554321 1122368999999986
No 29
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.24 E-value=6.4e-10 Score=116.89 Aligned_cols=186 Identities=14% Similarity=0.228 Sum_probs=121.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCC---------CCCCcEEEEEEecCccCcEeccccCCC--CCccCCCcEEEeeEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSA---------VWGNITWGHAVSADLIHWLYLPIAMVP--DQWYDINGVWTGSAT 196 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wG~~~WGHA~S~DLvhW~~~p~AL~P--d~~~D~~Gv~SGSav 196 (589)
.+.-||. ++.++|+|+||....-... .+....+--.+|+||+||+.++.++.| ...| ..++|.++++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4678998 5788999999997643321 122345778899999999999988873 2234 3478999987
Q ss_pred EccC----CeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCC-CCCCCCC-CCCCeeeeeCCCCeEEE
Q 007810 197 ILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRL 270 (589)
Q Consensus 197 v~~d----G~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p-~g~~~~~-fRDP~V~w~~~~g~w~M 270 (589)
. .+ |+++|+|+.. ...+++|+|+++. ..|+...+.|++... ++..... -.||.+|+ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 5 56 9999999853 2347899987652 689875457777532 2321122 36999965 57899999
Q ss_pred EEeeecC-----CeeeEEEEE-eCCCCCcEEcccccccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecC
Q 007810 271 TIGSKIG-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (589)
Q Consensus 271 viGa~~~-----~~G~i~lY~-S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~ 343 (589)
+.|+... ..+.+.+.+ ++|+..- .++... ....+.+|+|-+|+-+ | +++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~------------G---~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN------------G---TYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC------------C---EEEEEEeCC
Confidence 9985321 112344444 3466432 233211 1112479999999874 2 677777653
No 30
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.20 E-value=1e-10 Score=99.82 Aligned_cols=73 Identities=25% Similarity=0.369 Sum_probs=54.9
Q ss_pred CccEEEEEEcCCCCceEEEEEEecCCCCCCeeEEEeeCCCCCCCCCccccccce---EEEccC-CCEEEEEEEEec-EEE
Q 007810 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGS---KVPVLQ-GEKLSMRILVSH-IWK 582 (589)
Q Consensus 508 g~fGl~v~a~~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rSs~~~~~~~~~~g~---~~pv~~-~e~~~LRIlVD~-~VE 582 (589)
++|||.|+++.+.+|.|.|+|+..++ .+++||++|+... ....++. ..++.. ++.++||||||+ +||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~~------~l~vDR~~s~~~~--~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvE 80 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPANG------TLTVDRTNSGIND--FSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVE 80 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTTT------EEEEEETTSSTTS--CCCEEEEEEEEEETTTTESEEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCCC------EEEEeCCCCcccc--cccccCcceEEeeccCCCCcEEEEEEEeCCEEE
Confidence 46899999888889999999986543 3999999998321 1222332 224433 467899999999 999
Q ss_pred EEEcCC
Q 007810 583 TMSQGS 588 (589)
Q Consensus 583 iF~n~G 588 (589)
||+|||
T Consensus 81 iFvNdG 86 (86)
T PF08244_consen 81 IFVNDG 86 (86)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999998
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.17 E-value=1.2e-09 Score=116.25 Aligned_cols=189 Identities=19% Similarity=0.225 Sum_probs=122.3
Q ss_pred cccccccccceeeeec-CCC-c----ccCCccceEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-CcEecc-ccCC
Q 007810 110 TNAMFTWQRTSFHFQP-EKN-W----MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLP-IAMV 180 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P-~~g-w----mNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHA~S~DLv-hW~~~p-~AL~ 180 (589)
+.....|+|-..=|.+ +.+ | +..|. +++++|+|||||+..-. ...-...+.|.|+|++.. .|+++. +.|.
T Consensus 86 S~Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~ 164 (349)
T cd08992 86 SKDGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILS 164 (349)
T ss_pred CCCCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEec
Confidence 4445678766533322 121 3 34465 67889999999985321 111123567888888866 698765 4565
Q ss_pred CCC------------------ccCCCcEEEeeEEEccCCeEEEEEcccCC-------CccceEEEEEeCCCCCCCcceEE
Q 007810 181 PDQ------------------WYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWV 235 (589)
Q Consensus 181 Pd~------------------~~D~~Gv~SGSavv~~dG~~~l~YTG~~~-------~~~q~q~lA~s~D~~D~~l~~w~ 235 (589)
|+. .||..++...+++ ..+|+++|||+|+.. ...+.+++|+|+++- ..|+
T Consensus 165 p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~ 239 (349)
T cd08992 165 PSNDGIWKGDEDNRFLVKKKGSFDSHKVHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYV 239 (349)
T ss_pred CCcCCceeeccCceeEeccCCCcccCceECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCE
Confidence 642 3667777777765 579999999999752 134678999998873 6799
Q ss_pred EcCCCceecCCCCCCCCCCCCCeeeeeCCCCeE-EEEEeeecCCeeeEEEEEeCCCCCcEEcccccccCCCCCceeeeeE
Q 007810 236 KYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDF 314 (589)
Q Consensus 236 K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w-~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdl 314 (589)
|.+.|||+... + ..+| |+. .+.+ .|+..-. .++|. +..|+|.++|+....+.......|..+|||-
T Consensus 240 r~~~nPi~~~~------~--~~~~-~~~-~~~~~~~~~~d~-~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~ 306 (349)
T cd08992 240 KSPYNPITNSG------H--ETCV-WQY-KGGIAAMLTTDG-PEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDA 306 (349)
T ss_pred eCCCCcccCCC------C--ceEE-Eec-CCceEEEEeccC-CCCce--EEeCCCCccEEEeeeccCCCccccCccCccc
Confidence 99889998531 2 2377 974 4556 5554322 23354 4579999999987766543334566777776
Q ss_pred EEe
Q 007810 315 YPV 317 (589)
Q Consensus 315 f~l 317 (589)
+.-
T Consensus 307 ~~~ 309 (349)
T cd08992 307 DED 309 (349)
T ss_pred ccC
Confidence 543
No 32
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.09 E-value=6e-09 Score=108.59 Aligned_cols=135 Identities=19% Similarity=0.151 Sum_probs=93.9
Q ss_pred CcccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCC-ccCCCcEEEeeEEEccCCeEE
Q 007810 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (589)
Q Consensus 128 gwmNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~ 204 (589)
.++-||. ++++ +|+||||..............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578998 7777 99999999764322111123578999999999999998886543 3445679999986 4799999
Q ss_pred EEEcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEee
Q 007810 205 MLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (589)
Q Consensus 205 l~YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (589)
|+|+..... ....+.+|++++.. ..|+.....|+... .....||.+| .+.||++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCceE-EcCCCCEEEEEEe
Confidence 999876432 22345788886652 57887543454221 1235799995 4578999999864
No 33
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.04 E-value=1.8e-08 Score=104.22 Aligned_cols=130 Identities=20% Similarity=0.262 Sum_probs=89.3
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCcc-------CCCcEEEeeEEEccCCeE
Q 007810 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQI 203 (589)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~~ 203 (589)
-||. ++.++|+|+||.... .+..++|+||+||+..+.||.+...+ ...++|...++. .+|++
T Consensus 1 ~DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 3887 777899999997631 36789999999999999888643322 235799999864 68999
Q ss_pred EEEEcccCCC-ccceEEEEEeCCCCCCCc-ceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeee
Q 007810 204 VMLYTGSTDK-SVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 204 ~l~YTG~~~~-~~q~q~lA~s~D~~D~~l-~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
+|+|++.... ..+.+++|++++...|.- ..|++ ..+|+.+... ....-.||.+|+ ++||++||+.|+.
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~ 139 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSF 139 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEeccc
Confidence 9999986432 245678999987632210 11432 2466553211 112447999965 4789999998853
No 34
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.92 E-value=9.7e-08 Score=98.28 Aligned_cols=125 Identities=18% Similarity=0.141 Sum_probs=87.9
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCcc------CCCcEEEeeEEEccCC
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~------D~~Gv~SGSavv~~dG 201 (589)
+..-||. ++.++|.|+||+..... .......+|+||+||+..+.++...... ...++|...++. .+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECC
Confidence 5567998 78899999999854211 1124678999999999988776542211 245799999864 699
Q ss_pred eEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEee
Q 007810 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (589)
Q Consensus 202 ~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (589)
+++|+|+.........+.+|++++.. ..|+. |+... ..-.||.+|+ +++|+.||+.|.
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecC
Confidence 99999998644334567889887653 45653 44322 1347999965 579999999874
No 35
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.82 E-value=2.5e-08 Score=102.24 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=75.6
Q ss_pred eeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCC--CCCCCCCCCCCeeeeeCCCCeEEE
Q 007810 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRL 270 (589)
Q Consensus 193 GSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~~g~w~M 270 (589)
..++ ..+|+++|+||+........+++|+|.|+ ++|++.+ +|+|.++ ...+...++||.|+ + .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 3454 47999999999876555678999999996 8999975 5655442 23456788999995 3 5889999
Q ss_pred EEeeec--CCeeeEEEEEeCCCCCcEEcccc
Q 007810 271 TIGSKI--GKTGISLVYQTTDFKTYELLDEY 299 (589)
Q Consensus 271 viGa~~--~~~G~i~lY~S~Dl~~W~~~~~l 299 (589)
++++.. .....+.+++|+|+.+|++.+..
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998864 34457889999999999998654
No 36
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=98.82 E-value=1.7e-07 Score=96.44 Aligned_cols=169 Identities=15% Similarity=0.090 Sum_probs=107.7
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCc-----------cCCCcEEEeeEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSAT 196 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~-----------~D~~Gv~SGSav 196 (589)
++.-||. +++++|+|+||....-. ...+...+|+||+||+..+.++..... --..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 5567998 77889999999864211 113567899999999999877643211 013579999986
Q ss_pred EccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec
Q 007810 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (589)
Q Consensus 197 v~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~ 276 (589)
. .+|+++|+|+.. ...+.+|++++.. ..|+.. .++ ....||.+++ +.+|+.||+.+..
T Consensus 83 ~-~~gkyy~yys~~----~~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTN----TGGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEec----CCCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEE-cCCCCEEEEeCCC-
Confidence 5 699999999985 2346788886652 467543 121 1447999965 4789999998743
Q ss_pred CCeeeEEEEE-eCCCCCcEEcc-cccccCC-CCCceeeeeEEEecccCcccceeccCCCCeEEEEEeecC
Q 007810 277 GKTGISLVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (589)
Q Consensus 277 ~~~G~i~lY~-S~Dl~~W~~~~-~l~~~~~-~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~ 343 (589)
+ +.+.+ ++|+....-.. .++.... ..+.-|-|.+++-+ .+++|..|..
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------G~YYl~~S~~ 191 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN---------------GYYYIFNIAW 191 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC---------------CEEEEEEecC
Confidence 2 22333 56665552111 1221111 12367999998753 2677777654
No 37
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.81 E-value=2.6e-07 Score=95.59 Aligned_cols=187 Identities=14% Similarity=0.092 Sum_probs=113.4
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccC--CCCC-ccCCCcEEEeeEEEccCCeEEEEEc
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQ-WYDINGVWTGSATILPDGQIVMLYT 208 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL--~Pd~-~~D~~Gv~SGSavv~~dG~~~l~YT 208 (589)
||. ++.+++.|+||+.-.. .....++|+||+||+....++ .+.. .....++|...++. .+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEE
Confidence 887 7778899999986321 346789999999999865332 2322 13456799999864 6999999999
Q ss_pred ccCC--CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecC---CeeeEE
Q 007810 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISL 283 (589)
Q Consensus 209 G~~~--~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~---~~G~i~ 283 (589)
.... ...+.+++|.+++..++ +..|+.. .+++... + ..--||.++ .+ +|++||+++.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEE
Confidence 8753 23456677887653223 3689874 3443211 1 223699995 43 5999999875421 122344
Q ss_pred EEEeCCCCCcEEcccc--cccCC----C--CCceeeeeEEEecccCcccceeccCCCCeEEEEEeecCCCcceEEEEE
Q 007810 284 VYQTTDFKTYELLDEY--LHAVP----G--TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (589)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~----~--~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~vG 353 (589)
+.+..+...+. ++. +.... . .+.-|-|.+++.+ .+++|..|........|.+|
T Consensus 144 ~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~---------------G~yYl~yS~~~~~~~~Y~v~ 204 (288)
T cd08980 144 IAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN---------------GKVFLTYSASGSWTPDYCLG 204 (288)
T ss_pred EEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC---------------CEEEEEEECCCCCCCCCEEE
Confidence 45544433332 221 11110 1 1346888888774 16777777654434456665
No 38
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.77 E-value=3.2e-07 Score=94.55 Aligned_cols=130 Identities=20% Similarity=0.185 Sum_probs=86.9
Q ss_pred cccCCccceEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEecCccCcEeccccCCCCCc------------cCCCcE
Q 007810 129 WMNDPNGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGV 190 (589)
Q Consensus 129 wmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-G~~~WGHA~S~DLvhW~~~p~AL~Pd~~------------~D~~Gv 190 (589)
||-||. ++.. +|.|+|+......+. .| .....-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 689998 5555 679999987543221 01 1234568999999999999877754321 235679
Q ss_pred EEeeEEEccCCeEEEEEcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCC-ceecCCCCCCCCCCCCCeeeeeCCCCeE
Q 007810 191 WTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (589)
Q Consensus 191 ~SGSavv~~dG~~~l~YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~n-PVl~~p~g~~~~~fRDP~V~w~~~~g~w 268 (589)
|...+.. .+|+++|+|+..... ....+.+|.+++.. ..|+..... |+ ..-.||.+| .+.||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCE
Confidence 9999864 689999999976432 23456677766542 568764322 11 134699995 4578999
Q ss_pred EEEEee
Q 007810 269 RLTIGS 274 (589)
Q Consensus 269 ~MviGa 274 (589)
||+.+.
T Consensus 145 Yl~~~~ 150 (269)
T cd08986 145 YLVWHN 150 (269)
T ss_pred EEEeeC
Confidence 999874
No 39
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.67 E-value=2.6e-07 Score=95.82 Aligned_cols=122 Identities=18% Similarity=0.205 Sum_probs=85.6
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~Y 207 (589)
+..-||. +++.+|+|+|+..-.. + .....-.+|+||+||+..+.++.+. ..++|...++ ..+|+++|+|
T Consensus 13 ~~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yy 81 (280)
T cd09002 13 GDYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYF 81 (280)
T ss_pred CCCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEE
Confidence 3445997 7888999999765211 1 1246778999999999988877542 4579999876 4799999999
Q ss_pred cccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEee
Q 007810 208 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (589)
Q Consensus 208 TG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (589)
+.......+.+.+|++.+.. ..|++ |+... .....||.+|+ +.+|++||+.+.
T Consensus 82 s~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred EeecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 98754444567888886552 46764 22111 12236999966 578999999863
No 40
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.65 E-value=1.2e-06 Score=94.72 Aligned_cols=183 Identities=20% Similarity=0.187 Sum_probs=113.1
Q ss_pred cCCccce-EECCEEEEEEeeCCCC----CCCCCcEEEEEEecCcc----CcEeccccCCCCCcc-CCCcEEEeeEEEcc-
Q 007810 131 NDPNGPL-FYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP- 199 (589)
Q Consensus 131 NDPNG~~-y~~G~YHLFYQ~nP~~----~~wG~~~WGHA~S~DLv----hW~~~p~AL~Pd~~~-D~~Gv~SGSavv~~- 199 (589)
-|+.|-+ -++|+.-+|-.--|.. ..|+.-|.++..|++.. +|++.+.++.....+ ...--|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 4566644 4699666676665543 24677899999999999 999999877554431 23457999999887
Q ss_pred CCeEEEEEcccCC----Cccce---EE--EEEeCCCCCCCcceEEEcCCCceecCCCCC--C------CCCCCCCeeeee
Q 007810 200 DGQIVMLYTGSTD----KSVQV---QN--LAYPADPSDPLLLDWVKYPGNPVLVPPRHI--G------PKDFRDPTTAWA 262 (589)
Q Consensus 200 dG~~~l~YTG~~~----~~~q~---q~--lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~--~------~~~fRDP~V~w~ 262 (589)
||++.||||.... ...|. ++ ++...|.+ .-+..|++. ..++. +.|. . ...||||++| .
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~-v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~f-~ 217 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDG-VWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHVF-E 217 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTE-EEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEEE-E
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCc-eeEccccce--eEeec-cchhhhhChhhcCCccccCCeeE-E
Confidence 8999999998532 11222 22 23333321 122344443 34444 4332 1 2679999994 5
Q ss_pred C-CCCeEEEEEeeec-------------------------C--------CeeeEEEEEeCC--CCCcEEcccccccCCCC
Q 007810 263 G-PDGKWRLTIGSKI-------------------------G--------KTGISLVYQTTD--FKTYELLDEYLHAVPGT 306 (589)
Q Consensus 263 ~-~~g~w~MviGa~~-------------------------~--------~~G~i~lY~S~D--l~~W~~~~~l~~~~~~~ 306 (589)
+ .+|+-||+.-+.. . ..|+|-|.+.+| +..|+++++|+.+..-.
T Consensus 218 DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~ 297 (428)
T PF02435_consen 218 DPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVN 297 (428)
T ss_dssp ETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTB
T ss_pred CCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccc
Confidence 4 6899888875320 0 257777777754 56899999999875444
Q ss_pred CceeeeeEEEec
Q 007810 307 GMWECVDFYPVA 318 (589)
Q Consensus 307 gmwECPdlf~l~ 318 (589)
...|-|+++.++
T Consensus 298 de~ERP~iv~~~ 309 (428)
T PF02435_consen 298 DELERPHIVFMN 309 (428)
T ss_dssp S-EEEEEEEEET
T ss_pred ccccCCcEEEEC
Confidence 589999999996
No 41
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.64 E-value=1e-06 Score=90.63 Aligned_cols=152 Identities=18% Similarity=0.154 Sum_probs=97.4
Q ss_pred cccccccccceeeeecCCCc-----ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEecc--ccCCCC
Q 007810 110 TNAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMVPD 182 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gw-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p--~AL~Pd 182 (589)
|..+..|++...-+.|+.++ +-.|+ ++..+|+|||||.-+... .......++|+|+|+++|+..+ +.+.+.
T Consensus 37 S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~ 114 (280)
T cd08995 37 TKDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADG 114 (280)
T ss_pred ccCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCc
Confidence 44466776666556664332 23344 566789999999865322 1124578999999999999875 334323
Q ss_pred CccCCCcEEEeeEEEcc-CCeEEEEEcccCC----CccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCC
Q 007810 183 QWYDINGVWTGSATILP-DGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDP 257 (589)
Q Consensus 183 ~~~D~~Gv~SGSavv~~-dG~~~l~YTG~~~----~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP 257 (589)
..++...+-...++.++ +|+++|+|.+... .....+.++.|.|+ .+|+.. .+++.+..+ ..+=-|
T Consensus 115 ~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~~---~~~E~P 184 (280)
T cd08995 115 EGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGLY---FMPECP 184 (280)
T ss_pred cccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCCc---ceeecc
Confidence 34444445567776543 5899999976542 22345667888886 899875 455543211 235578
Q ss_pred eeeeeCCCCeEEEEEeee
Q 007810 258 TTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 258 ~V~w~~~~g~w~MviGa~ 275 (589)
.+ ++ .+|+|+|+++.+
T Consensus 185 ~l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 185 DL-FK-MGDWWYLVYSEF 200 (280)
T ss_pred eE-EE-ECCEEEEEEEec
Confidence 88 44 679999999865
No 42
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.62 E-value=3e-07 Score=94.87 Aligned_cols=150 Identities=23% Similarity=0.254 Sum_probs=110.8
Q ss_pred cceEECCEEEEEEeeC--CCCCCCCCcEEEEEEecCccC-cEecc-ccCCC-CCccCCCcEEEeeEEEccCCeEEEEEcc
Q 007810 135 GPLFYKGWYHLFYQYN--PDSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVMLYTG 209 (589)
Q Consensus 135 G~~y~~G~YHLFYQ~n--P~~~~wG~~~WGHA~S~DLvh-W~~~p-~AL~P-d~~~D~~Gv~SGSavv~~dG~~~l~YTG 209 (589)
+++++++++||+|.-- -+...-.-.|.+-|.|+|+++ |+-.+ +.+.| ..+++.-||....++. .+|+++|.|||
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~mtYTa 113 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYMTYTA 113 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEEEEEe
Confidence 5788999999999861 001111346788899999999 99776 77889 5578889999999975 68999999999
Q ss_pred cCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-CC--eeeEEEEE
Q 007810 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GK--TGISLVYQ 286 (589)
Q Consensus 210 ~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~--~G~i~lY~ 286 (589)
.+.. .+..++|.++|. .+|+|.+ +++ +| ++||-.++=...+|+|.|+---.. +. .+-+.+..
T Consensus 114 ~s~~-g~~~~la~t~~f-----~n~~rig--~i~-~p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~niwia~ 178 (314)
T COG2152 114 YSDK-GPRLALAVTKDF-----LNWERIG--AIF-PP------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNIWIAF 178 (314)
T ss_pred cCCC-Ccccchhhhhhh-----hhhhhcc--ccc-CC------CCCCceEeeEEecCcEEEEEeecccccCccCceEEEE
Confidence 8543 577899999997 7899963 333 22 556766643345789998854322 22 46788999
Q ss_pred eCCCCCcEEccccc
Q 007810 287 TTDFKTYELLDEYL 300 (589)
Q Consensus 287 S~Dl~~W~~~~~l~ 300 (589)
|.|+.+|.....++
T Consensus 179 S~dl~~w~~~~~~l 192 (314)
T COG2152 179 SPDLEHWGIHRKLL 192 (314)
T ss_pred cCCccCCCccceee
Confidence 99999998765554
No 43
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.62 E-value=2.6e-07 Score=95.57 Aligned_cols=108 Identities=25% Similarity=0.334 Sum_probs=81.3
Q ss_pred cCCccceEECCEEEEEEeeCCCC----CCCCCcEEEEEEecC-ccCcEec-cccCCCCC-ccCCCcEEEeeEEEccCCeE
Q 007810 131 NDPNGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSAD-LIHWLYL-PIAMVPDQ-WYDINGVWTGSATILPDGQI 203 (589)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHA~S~D-LvhW~~~-p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~ 203 (589)
-+|. +++++|+|||||..+... ...++...|+|+|+| +-+|+.+ .++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 3675 677899999999976431 122356899999999 4699984 46676654 36788899999986558999
Q ss_pred EEEEcccCCC---ccceEEEEEeCCCCCCCcceEEEcCCCcee
Q 007810 204 VMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243 (589)
Q Consensus 204 ~l~YTG~~~~---~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl 243 (589)
+|+|+|+... ..+.|++|+|.|.. .+|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998642 35778999998863 579998666664
No 44
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.60 E-value=2.6e-06 Score=89.18 Aligned_cols=108 Identities=26% Similarity=0.422 Sum_probs=73.9
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEEccc
Q 007810 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210 (589)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~ 210 (589)
-||. ++.++|+|+||-... + +..+|+||+||+..+.++. ..++|..++.. .+|++++.|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~~ 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTASTY 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeCC
Confidence 6998 678899999886642 1 3689999999999987753 46799999864 688876665532
Q ss_pred CCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeee
Q 007810 211 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 211 ~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
.+.+|+++|.- .-.|... .+. ......||.+|+ +.||++||+.|..
T Consensus 66 ------~~~v~~s~~p~---gp~w~~~--~~~-------~~~~~IDp~vf~-DdDGk~Yl~~g~~ 111 (295)
T cd08982 66 ------NSRIYKTADPL---SGPWEEV--DKS-------FPPGLADPALFI-DDDGRLYLYYGCS 111 (295)
T ss_pred ------CceEEEeCCCC---CCCcccc--ccc-------cCCCccCCceEE-CCCCCEEEEEecC
Confidence 23578876652 1235442 010 112457999965 5789999998753
No 45
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.59 E-value=3.3e-06 Score=87.41 Aligned_cols=210 Identities=16% Similarity=0.302 Sum_probs=129.3
Q ss_pred ccccceeeeecCCCc---ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCC----CCCccCC
Q 007810 115 TWQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDI 187 (589)
Q Consensus 115 ~w~Rp~~Hf~P~~gw---mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~ 187 (589)
+|.-..--.+|..|| +-||- .++++|+||+|-..+.. ..|+-+-+. |+||...+-|+. +.. ..
T Consensus 6 ~w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~ 75 (303)
T cd08987 6 RWTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MT 75 (303)
T ss_pred eeccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCCC------CCceeeeec-ccCHhHhccchhhcccCCC--CC
Confidence 343344456788899 79998 67788999999876431 224333444 999998886652 221 23
Q ss_pred CcEEEeeEE-EccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCC
Q 007810 188 NGVWTGSAT-ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266 (589)
Q Consensus 188 ~Gv~SGSav-v~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g 266 (589)
.+.|...++ ..+++++||+|+. + ..+.|++.|..+| ..|... .|++...........-|+.|+ ..++
T Consensus 76 ~~fwAPqVfyf~pk~kwYL~Yq~---~---~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd~ 143 (303)
T cd08987 76 GYRVAPQVFYFAPQNKWYLIYQW---W---PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDDT 143 (303)
T ss_pred cccccCEEeeeccCCEEEEEEec---C---ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCCC
Confidence 467888875 1478999999994 1 2478999998877 467653 577653222233456899995 3578
Q ss_pred eEEEEEeeecCCeeeEEEEEeC-CCCCcE--Ecc--cccccCCCCCceeeeeEEEecccCcccceeccCCCCeEEEEEee
Q 007810 267 KWRLTIGSKIGKTGISLVYQTT-DFKTYE--LLD--EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKAS 341 (589)
Q Consensus 267 ~w~MviGa~~~~~G~i~lY~S~-Dl~~W~--~~~--~l~~~~~~~gmwECPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s 341 (589)
+.||.... ..| .||+|+ .+.+.- +-. .+..........|-|+.|++.+ . .+++|.++
T Consensus 144 ~~YLff~~---dnG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~G------------~-~~Ylmive 205 (303)
T cd08987 144 NCYLFFSD---DNG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVKG------------Q-NQYLLIVE 205 (303)
T ss_pred CEEEEEec---CCC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEECC------------C-eEEEEEEE
Confidence 88888642 234 467763 222221 100 1111111124799999999972 2 37888888
Q ss_pred cCCCcceEEEEEEec--CCCCcccCC
Q 007810 342 LDDTKVDHYAIGTYN--PANDKWTPD 365 (589)
Q Consensus 342 ~~~~~~~~Y~vG~~d--~~~~~f~p~ 365 (589)
.....+..|+++ |- --.+.|+|.
T Consensus 206 A~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 206 AIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred ecCCCCCCeEEE-EEcCCCCCCceec
Confidence 766544457777 32 223467653
No 46
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.52 E-value=2.8e-06 Score=85.84 Aligned_cols=156 Identities=17% Similarity=0.148 Sum_probs=97.0
Q ss_pred CCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEE
Q 007810 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (589)
Q Consensus 127 ~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~ 206 (589)
.+-+-+|. +++++|+|||||+.+..+ ......+.|+|+|+.+|........+. ....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~~--~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPPT--SNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcCc--cCCCCccCcceEEcCCCCEEEE
Confidence 45677887 788999999999987542 234568999999999997654211111 1234678899988777999999
Q ss_pred EcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec--CCeeeEE
Q 007810 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTGISL 283 (589)
Q Consensus 207 YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~--~~~G~i~ 283 (589)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ ++ .+|+|||++.+.. ...-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 9875321 1244566766553 22322 233321111111224458888 44 5799999987642 2233566
Q ss_pred EEEeCCCC-CcEEc
Q 007810 284 VYQTTDFK-TYELL 296 (589)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (589)
+++|++.. -|+..
T Consensus 202 ~~~s~~~~Gp~~~~ 215 (271)
T cd08978 202 YATSDSIDGPYVKK 215 (271)
T ss_pred EEECCCCCCCcCcC
Confidence 77887763 35543
No 47
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.43 E-value=1.4e-06 Score=90.13 Aligned_cols=78 Identities=24% Similarity=0.408 Sum_probs=56.4
Q ss_pred CCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-----CCeeeEEEEEeCCCCCcEEcccccccCCCCC-ceee
Q 007810 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWEC 311 (589)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-----~~~G~i~lY~S~Dl~~W~~~~~l~~~~~~~g-mwEC 311 (589)
.++|||.+.. +...+|||+|++..++|+|||+..... .....+.+|+|+||++|+..+.+....+..+ +| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 3689998643 458999999976436899999876432 1223578999999999998877653323334 67 9
Q ss_pred eeEEEec
Q 007810 312 VDFYPVA 318 (589)
Q Consensus 312 Pdlf~l~ 318 (589)
|++|...
T Consensus 81 Pev~~d~ 87 (276)
T cd08983 81 PEAFWDA 87 (276)
T ss_pred ccceEcC
Confidence 9999875
No 48
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.43 E-value=6e-06 Score=84.91 Aligned_cols=153 Identities=16% Similarity=0.130 Sum_probs=93.9
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEeccccC-C-CCCccCCCcEEEeeEEEccCCeEEEEE
Q 007810 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAM-V-PDQWYDINGVWTGSATILPDGQIVMLY 207 (589)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL-~-Pd~~~D~~Gv~SGSavv~~dG~~~l~Y 207 (589)
..|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+..+ . +. +..+....++++++||+++|+|
T Consensus 63 waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~---~~~~~~Dp~v~~d~dG~~Yl~~ 136 (287)
T cd08999 63 WAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE---GEGGAIDPSFFTDTDGKRYLVW 136 (287)
T ss_pred cCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC---CCCCccCCCeEECCCCCEEEEE
Confidence 3454 678899999999876443 235678999999965 898765322 2 22 2345677888877799999999
Q ss_pred cccCCC--ccceEEEE-EeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec--CC--ee
Q 007810 208 TGSTDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GK--TG 280 (589)
Q Consensus 208 TG~~~~--~~q~q~lA-~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~--~~--~G 280 (589)
.+.... ..+.+.++ .+.|. .+|+... ..++.+........+=-|.+ ++ .+|+|||++.+.. .. .=
T Consensus 137 ~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y 208 (287)
T cd08999 137 KSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTY 208 (287)
T ss_pred eccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCE
Confidence 754321 12234444 44443 5665421 22333222222233456888 44 5899999987642 11 22
Q ss_pred eEEEEEeCCCC-CcEEcc
Q 007810 281 ISLVYQTTDFK-TYELLD 297 (589)
Q Consensus 281 ~i~lY~S~Dl~-~W~~~~ 297 (589)
.+.+++|+|+. .|+...
T Consensus 209 ~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 209 AVGVARSKSLLGPYVKAP 226 (287)
T ss_pred EEEEEEeCCCcCCcCCCC
Confidence 46678999976 777643
No 49
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.37 E-value=1.1e-05 Score=81.86 Aligned_cols=156 Identities=17% Similarity=0.157 Sum_probs=98.1
Q ss_pred CcccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-cEecc-ccCCCCC--ccCCCcEEEeeEEEccCCe
Q 007810 128 NWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVPDQ--WYDINGVWTGSATILPDGQ 202 (589)
Q Consensus 128 gwmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvh-W~~~p-~AL~Pd~--~~D~~Gv~SGSavv~~dG~ 202 (589)
+-+-.|. +++.+ |+|+|||.-... ..+....+.|+|+|+.. |+... ..+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455666 66777 999999987643 22456789999999876 55432 1122221 2233457889988776699
Q ss_pred EEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec----CC
Q 007810 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GK 278 (589)
Q Consensus 203 ~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~----~~ 278 (589)
++|+|.+........+.+|.|+|. .+|++....+++.... ....+--|.++ + .+|+|||++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998764333456789999886 7888753222222211 22455679984 4 5799999997653 22
Q ss_pred eeeEEEEEeCC-CCCcEE
Q 007810 279 TGISLVYQTTD-FKTYEL 295 (589)
Q Consensus 279 ~G~i~lY~S~D-l~~W~~ 295 (589)
.-.+.+++|++ +-.|+.
T Consensus 206 ~y~~~~~~~~~~~g~~~~ 223 (286)
T cd08772 206 TYSIGYARSESDTGPYVP 223 (286)
T ss_pred CcceEEEEccCCCCCccc
Confidence 23455566655 344544
No 50
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.30 E-value=2.4e-05 Score=81.01 Aligned_cols=154 Identities=15% Similarity=0.145 Sum_probs=89.3
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEE
Q 007810 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (589)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~Y 207 (589)
.+-.|. +++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. ...+.++++.++||+++|+|
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~ 126 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYY 126 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEE
Confidence 344676 788999999999876432 234678999999977 6887654333321 34567888888789999999
Q ss_pred cccCCCc--cceEEEEEeCCCCCCCcceEEEcCC---CceecC-------CCC----CCCCCCCCCeeeeeCCCCeEEEE
Q 007810 208 TGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------PRH----IGPKDFRDPTTAWAGPDGKWRLT 271 (589)
Q Consensus 208 TG~~~~~--~q~q~lA~s~D~~D~~l~~w~K~~~---nPVl~~-------p~g----~~~~~fRDP~V~w~~~~g~w~Mv 271 (589)
+...... ...+..+.+.|. .+|..... .|+..+ +.. ....-.=-|.+ .+ .+|+|||+
T Consensus 127 ~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ 199 (294)
T cd08991 127 SRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLT 199 (294)
T ss_pred EecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEE
Confidence 8654321 223344555553 45542111 122111 000 01111235777 34 57999999
Q ss_pred Eeeec-CCee-eEEEEEeCC-CCCcEEc
Q 007810 272 IGSKI-GKTG-ISLVYQTTD-FKTYELL 296 (589)
Q Consensus 272 iGa~~-~~~G-~i~lY~S~D-l~~W~~~ 296 (589)
..+.. .... .+.+.+|++ +-.|+..
T Consensus 200 ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 200 YSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 86532 1111 355667776 4567764
No 51
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.29 E-value=2.1e-05 Score=80.79 Aligned_cols=150 Identities=15% Similarity=0.050 Sum_probs=91.8
Q ss_pred CcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEecccc-CCCCCccCCCcEEEeeEEEccCCeEEE
Q 007810 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MVPDQWYDINGVWTGSATILPDGQIVM 205 (589)
Q Consensus 128 gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~A-L~Pd~~~D~~Gv~SGSavv~~dG~~~l 205 (589)
+-+-.|. +++++|+|||||..... .+....|+|+|+|.. .|+..... +.+ ...+.......+++++.||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455676 78899999999987643 235678999999976 79987532 322 22233456788888877899999
Q ss_pred EEcccCCCccceEEEEE-eCCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeee
Q 007810 206 LYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (589)
Q Consensus 206 ~YTG~~~~~~q~q~lA~-s~D~~D~~l~~w~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~ 281 (589)
+|.+. +...+|. +.|. .+|+.. ..+|..+. .....-+==|.+ ++ .+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99864 2344443 3343 666542 22332111 101111235777 44 6899999987642 344
Q ss_pred EEEEEeCCCC-CcEEccc
Q 007810 282 SLVYQTTDFK-TYELLDE 298 (589)
Q Consensus 282 i~lY~S~Dl~-~W~~~~~ 298 (589)
+.+.+|+++. -|+..+.
T Consensus 201 ~~~a~s~~p~GP~~~~g~ 218 (274)
T cd08990 201 IAYATSDSPLGPFTYRGV 218 (274)
T ss_pred EEEEEcCCCCCCcccCcE
Confidence 5556777764 3554443
No 52
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.24 E-value=1.2e-05 Score=82.81 Aligned_cols=121 Identities=15% Similarity=0.121 Sum_probs=70.0
Q ss_pred CCCCeeeeeCCCCeEEEEEeeecC---------CeeeEEEEEeCCCCCcEEcccccccCC--------------CCCcee
Q 007810 254 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP--------------GTGMWE 310 (589)
Q Consensus 254 fRDP~V~w~~~~g~w~MviGa~~~---------~~G~i~lY~S~Dl~~W~~~~~l~~~~~--------------~~gmwE 310 (589)
||||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|++.+.++...+ ..+..+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999995 4467889998664321 123577999999999999887764321 122334
Q ss_pred eeeEEEecccCcccceeccCCCCeEEEEEeecCCC--cceEEEEEEecCCCCcccCCCCCcccccceecccCcCccceeE
Q 007810 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSF 388 (589)
Q Consensus 311 CPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~~~--~~~~Y~vG~~d~~~~~f~p~~~~~D~g~~~~lD~G~fYA~qtf 388 (589)
||+++.++ | |++|-.+.... ......+.+=|.-.+.|+..... + .+. .-.-+..|
T Consensus 81 AP~v~~~~------------g---~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIK------------G---RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSLF 137 (269)
T ss_pred CceEEEEC------------C---EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCceE
Confidence 99999985 1 67777665431 12223333323223455532110 0 011 12336678
Q ss_pred ecCCCCcEEEE
Q 007810 389 YDPYKKRRIVW 399 (589)
Q Consensus 389 ~d~~~gRril~ 399 (589)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 5777665
No 53
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.20 E-value=5.4e-06 Score=87.52 Aligned_cols=106 Identities=22% Similarity=0.295 Sum_probs=79.7
Q ss_pred CCcEEEeeEEEccCCe--EEEEEcccCCCccc-eEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeC
Q 007810 187 INGVWTGSATILPDGQ--IVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 263 (589)
Q Consensus 187 ~~Gv~SGSavv~~dG~--~~l~YTG~~~~~~q-~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~ 263 (589)
...||-..|++. +|. ++|+|.+....... .+.+|.|.|+ .+|++. .+||+.|...++....-||.|..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~-- 99 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK-- 99 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE--
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE--
Confidence 467999999864 554 89999887655444 7899999997 899986 58999875555555678999975
Q ss_pred CCCeEEEEEeeecCCeeeEEEEEeCCCCCcEEcccccc
Q 007810 264 PDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (589)
Q Consensus 264 ~~g~w~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~ 301 (589)
.+++|||++.+......++.+.+|+||++|+..+..+.
T Consensus 100 i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 46899999988755555677899999999999986654
No 54
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.19 E-value=1.6e-05 Score=82.48 Aligned_cols=153 Identities=18% Similarity=0.176 Sum_probs=96.8
Q ss_pred cccccccccceeeeecCCCcccCCcc-----ceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEec-CccCcEecccc-CCC
Q 007810 110 TNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPIA-MVP 181 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmNDPNG-----~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHA~S~-DLvhW~~~p~A-L~P 181 (589)
|..++.|++..-=+.|... .|.+| .+..+ |+|+|||.-+......+...-++|+|+ |+++|+..+.. +.+
T Consensus 39 S~Dlv~W~~~~~al~p~~~--~d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~ 116 (298)
T cd08996 39 SKDLVHWEHLPVALAPDDP--YDSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIP 116 (298)
T ss_pred ecCccceeECCcccCCCCc--ccCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEc
Confidence 4456677655433444222 23333 34456 999999986543211235677899999 89999987632 221
Q ss_pred CCccCCCcEEEeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeee
Q 007810 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 261 (589)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w 261 (589)
....+..+.....++. .+|+++|+|++...+......++.|+|+ ++|++. .++.... +.....+=-|.++
T Consensus 117 ~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l~- 186 (298)
T cd08996 117 PPDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDLF- 186 (298)
T ss_pred CCCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcEE-
Confidence 1222345567888765 5699999999876544566788999886 899985 3443211 1122356688884
Q ss_pred eCCC--CeEEEEEeee
Q 007810 262 AGPD--GKWRLTIGSK 275 (589)
Q Consensus 262 ~~~~--g~w~MviGa~ 275 (589)
+ -+ ++|+|+++..
T Consensus 187 ~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 187 P-LDVEGKWVLIFSPQ 201 (298)
T ss_pred E-ECCCCeEEEEECCC
Confidence 3 46 9999999865
No 55
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.13 E-value=9.3e-05 Score=76.64 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=88.1
Q ss_pred cccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEE
Q 007810 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (589)
Q Consensus 129 wmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DL--vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~ 206 (589)
-+..|. +++.+|+|||||.-+..+. +....++|+|+|+ -.|+..++.+.+...+....+..+++++++||+++|+
T Consensus 57 ~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 57 NLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 345565 6788999999998764321 2456799999998 7999877666554332334577888888779999999
Q ss_pred EcccCCCccceEEEEEe-CCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-C---Cee-
Q 007810 207 YTGSTDKSVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G---KTG- 280 (589)
Q Consensus 207 YTG~~~~~~q~q~lA~s-~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~---~~G- 280 (589)
|.+... .+.+|.. .|.+.+ ..+... ...++..+.. ..-.=.|++ ++ .+|+|||++.+.. . ..+
T Consensus 134 ~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCce
Confidence 965321 2333333 222211 222110 0112222111 112347888 44 6899999876431 1 112
Q ss_pred eEEEEEeCCCC
Q 007810 281 ISLVYQTTDFK 291 (589)
Q Consensus 281 ~i~lY~S~Dl~ 291 (589)
++.+++|+++.
T Consensus 203 ~v~~~~s~~~~ 213 (288)
T cd08998 203 NIRVGRSKSIT 213 (288)
T ss_pred EEEEEEcCCCC
Confidence 46688888753
No 56
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.95 E-value=0.00011 Score=75.18 Aligned_cols=173 Identities=14% Similarity=0.137 Sum_probs=100.7
Q ss_pred cccccccccceeeeecCCCcccCCcc------ceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEeccccCCCC
Q 007810 110 TNAMFTWQRTSFHFQPEKNWMNDPNG------PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPD 182 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmNDPNG------~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd 182 (589)
+..+..|......+.+...+....++ +++.+|+|||||...... .....+.|+|++.. .|+.....+.+
T Consensus 40 S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~- 115 (286)
T PF04616_consen 40 SKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP- 115 (286)
T ss_dssp ESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE-
T ss_pred CCCCcccccceeeecccccccccccccccCCeEEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec-
Confidence 34466787777777665544422222 677899999999922111 23457899999986 89987644333
Q ss_pred CccCCCcEEEeeEEEccCCeEEEEEcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeee
Q 007810 183 QWYDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 261 (589)
Q Consensus 183 ~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w 261 (589)
...+..+++++++||+.+|+|.+.... ..+.+.+|...+.. .++.......+..........-+=-|++ +
T Consensus 116 ----~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~ 186 (286)
T PF04616_consen 116 ----GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-F 186 (286)
T ss_dssp ----SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-E
T ss_pred ----cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-E
Confidence 234667888888779999999886442 23445555443321 4444432122222111111112224777 4
Q ss_pred eCCCCeEEEEEeeec-CCeeeEEEEEeCCCCC-cEEc
Q 007810 262 AGPDGKWRLTIGSKI-GKTGISLVYQTTDFKT-YELL 296 (589)
Q Consensus 262 ~~~~g~w~MviGa~~-~~~G~i~lY~S~Dl~~-W~~~ 296 (589)
+ .+|+|||++.+.. ...=.+.+++|+|+.. |+..
T Consensus 187 k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~~ 222 (286)
T PF04616_consen 187 K-HGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEWK 222 (286)
T ss_dssp E-ETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEET
T ss_pred E-cCCCEEEEEeccCCCCCceEEEeeccCCCCceeec
Confidence 4 6899999987642 2223466789999865 4443
No 57
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.84 E-value=0.00019 Score=79.40 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=91.4
Q ss_pred cccccccccceeeeecCCCc----ccCCccceEECCEEEEEEeeCCCCCCCC-CcEEEEEEecCccCcEecc-ccCCCCC
Q 007810 110 TNAMFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPDQ 183 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHA~S~DLvhW~~~p-~AL~Pd~ 183 (589)
+..++.|++-.-=+.|..-| +-.++ .+..+|++||||.-+.....+. ...-.+|+|+|+.+|+..+ ++|.+..
T Consensus 62 S~Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~ 140 (445)
T TIGR01322 62 SKDLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPP 140 (445)
T ss_pred CCCccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCC
Confidence 34466776544444454322 12333 3457999999999764322222 2234689999999999876 4555432
Q ss_pred ccCCCcEEEeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCC---CCCCCCCCCCeee
Q 007810 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTA 260 (589)
Q Consensus 184 ~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~---g~~~~~fRDP~V~ 260 (589)
.....+.-...++ ..+|+++|+|.+..........+..|+|+ ++|+.. .++..+.. +.....+=-|.+
T Consensus 141 ~~~~~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl- 211 (445)
T TIGR01322 141 AGYTAHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPDL- 211 (445)
T ss_pred CCCcCcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCeE-
Confidence 2112234456654 46899999997754332234467778775 899986 34543321 111123557777
Q ss_pred eeCCCCeEEEEEeee
Q 007810 261 WAGPDGKWRLTIGSK 275 (589)
Q Consensus 261 w~~~~g~w~MviGa~ 275 (589)
+. -+|+|+|+++..
T Consensus 212 f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 212 FS-LDGQDVLLFSPQ 225 (445)
T ss_pred EE-ECCcEEEEEecc
Confidence 33 578999998754
No 58
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=97.78 E-value=0.00037 Score=72.33 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=48.8
Q ss_pred CCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEEeCCCCCcEEcccccccCCCCCceeeeeEEEec
Q 007810 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (589)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~ 318 (589)
.||||. .++.||.|++ .+++|||+.++. +..+.+.+|+|+||.+|+..+..+.. ...++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~-~~~~gi~i~~S~DL~~W~~~g~~~~~-~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSF-KYTPGLVIWHSRDLVNWTPVGPALPE-YEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcch-hcCCCEEEEECCCcCCceEccccccC-CCCCEE-cCeeEEEC
Confidence 488875 2568999954 478999975532 22234779999999999998776543 223589 89998865
No 59
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.78 E-value=0.00034 Score=73.07 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=47.1
Q ss_pred CCCCCCeeeeeCCCCeEEEEEeeecC-----CeeeEEEEEeCCCCCcEEcccccccCC---CCCceeeeeEEEec
Q 007810 252 KDFRDPTTAWAGPDGKWRLTIGSKIG-----KTGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVA 318 (589)
Q Consensus 252 ~~fRDP~V~w~~~~g~w~MviGa~~~-----~~G~i~lY~S~Dl~~W~~~~~l~~~~~---~~gmwECPdlf~l~ 318 (589)
..+|||+|++...+|+|||+..+... ..| +-+|+|+||++|+..+.++.... ......+|++...+
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~g-i~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTG-FDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCc-EEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC
Confidence 46899999765458999999765421 123 67999999999999887764322 12345689998764
No 60
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=97.76 E-value=0.00013 Score=75.29 Aligned_cols=78 Identities=21% Similarity=0.281 Sum_probs=55.0
Q ss_pred CceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEEeCCCCCcEEcccccccC---------CCCCcee
Q 007810 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 310 (589)
Q Consensus 240 nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~~~---------~~~gmwE 310 (589)
||||. .++.||.|+. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67763 3678999953 57899999765322233 6689999999999988765421 122478
Q ss_pred eeeEEEecccCcccceeccCCCCeEEEEEeecC
Q 007810 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (589)
Q Consensus 311 CPdlf~l~~~~~~~l~~s~~g~~~k~vl~~s~~ 343 (589)
||+++..+ | ||+|-.+..
T Consensus 70 AP~v~~~~------------G---~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD------------G---KFWLIYTAV 87 (269)
T ss_pred cceEEEEC------------C---EEEEEEecc
Confidence 99999875 2 677766654
No 61
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.61 E-value=0.0011 Score=71.13 Aligned_cols=175 Identities=17% Similarity=0.163 Sum_probs=101.3
Q ss_pred cccccccccceeeeecCCCccc-----CCccceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCcE----eccc
Q 007810 110 TNAMFTWQRTSFHFQPEKNWMN-----DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWL----YLPI 177 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmN-----DPNG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHA~S~DLvhW~----~~p~ 177 (589)
+..+..|.+ .-++.|+ +|.- -+..++..+|+|||||.-+-.... .-....++|+++|+..|. .+..
T Consensus 48 S~dlv~W~~-~~~l~p~-~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~ 125 (349)
T cd08997 48 SRAGGNWID-GGKVFPD-GLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHE 125 (349)
T ss_pred eCCCCcccC-CCccCCC-CcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccce
Confidence 444556655 3345553 3311 122222235999999997632111 123678999999985444 3334
Q ss_pred cCCCCC-ccCC-------------CcEEEeeEEEcc-CCeEEEEEcccCCCc---------------------------c
Q 007810 178 AMVPDQ-WYDI-------------NGVWTGSATILP-DGQIVMLYTGSTDKS---------------------------V 215 (589)
Q Consensus 178 AL~Pd~-~~D~-------------~Gv~SGSavv~~-dG~~~l~YTG~~~~~---------------------------~ 215 (589)
.+.++. .|+. ...-...++.++ +|+.+|++++++... .
T Consensus 126 lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 205 (349)
T cd08997 126 LFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQN 205 (349)
T ss_pred eeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCcccccccccccccccccccccccccc
Confidence 455654 3321 123355666655 589999999986421 1
Q ss_pred ceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecC-------CeeeEEEEEeC
Q 007810 216 QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVYQTT 288 (589)
Q Consensus 216 q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~-------~~G~i~lY~S~ 288 (589)
-+++||++++. .|.+|+-+ .|++.+. +. ....-+|.++ + .+|+|||+..++.. ....+..|.|+
T Consensus 206 G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v-~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsd 276 (349)
T cd08997 206 GNVGIAVAKND---DLTEWKLL--PPLLEAN-GV-NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSD 276 (349)
T ss_pred ceEEEEEecCC---CCCCcEEc--CccccCC-Cc-CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeC
Confidence 34567766542 24789876 5887643 22 2346799994 4 68999999775421 11235567788
Q ss_pred CCC-CcEE
Q 007810 289 DFK-TYEL 295 (589)
Q Consensus 289 Dl~-~W~~ 295 (589)
++. -|+.
T Consensus 277 sl~GP~~~ 284 (349)
T cd08997 277 SLRGPYKP 284 (349)
T ss_pred CCCCCCcc
Confidence 764 3443
No 62
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.59 E-value=0.00051 Score=75.80 Aligned_cols=155 Identities=16% Similarity=0.198 Sum_probs=91.3
Q ss_pred cccccccccceeeeecCCCcccCCcc-----ceEECCEEEEEEeeCC-CCC--CCCCc-EEEEEEecCccCcEecc--cc
Q 007810 110 TNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYNP-DSA--VWGNI-TWGHAVSADLIHWLYLP--IA 178 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wG~~-~WGHA~S~DLvhW~~~p--~A 178 (589)
+..++.|++..-=+.|.. + .|.+| .+..+|.|||||.-+- ... ..+.. .-.+|+|+|++||+..+ ++
T Consensus 45 S~Dlv~W~~~~~aL~P~~-~-~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pv 122 (437)
T smart00640 45 SKDLVHWTHLPVALAPDE-W-YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPV 122 (437)
T ss_pred cCCcceeeecCcccCCCC-c-CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcE
Confidence 445667765333355554 2 35555 3445788999998652 111 12222 23678899999999873 55
Q ss_pred CCCCCccCCCcEEEeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCe
Q 007810 179 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (589)
Q Consensus 179 L~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~ 258 (589)
|.+...+.....-...++..++|+++|++.+...+..-.+.++.|+|+ ++|+.. .+++.++.+.....|=.|-
T Consensus 123 i~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPd 195 (437)
T smart00640 123 LVPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPD 195 (437)
T ss_pred EeCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCc
Confidence 554432223334455655444468999998765444455778889886 899875 3554431111113456677
Q ss_pred eeeeCCCC-----eEEEEEeee
Q 007810 259 TAWAGPDG-----KWRLTIGSK 275 (589)
Q Consensus 259 V~w~~~~g-----~w~MviGa~ 275 (589)
.+ . -++ +|+|+++..
T Consensus 196 lf-~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 196 LF-P-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EE-E-eCCCCCceeEEEEECcC
Confidence 63 2 234 899988765
No 63
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.57 E-value=0.0028 Score=65.63 Aligned_cols=144 Identities=15% Similarity=0.128 Sum_probs=80.1
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc------CcEeccccCCCCCccCCCcEEEeeEEEccCCeE
Q 007810 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI------HWLYLPIAMVPDQWYDINGVWTGSATILPDGQI 203 (589)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv------hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~ 203 (589)
+.-|. +.+++|+|||||.-...+. .....|.|+|++.. .|+...+.+.++.. +......+++++++||+.
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~ 132 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQP 132 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCE
Confidence 34454 6788999999998765432 23567999999853 25543333333322 123457888888889999
Q ss_pred EEEEcccCCCccceEEEE-EeCCCCCCCcceEEEcCCC--ceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec----
Q 007810 204 VMLYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGN--PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI---- 276 (589)
Q Consensus 204 ~l~YTG~~~~~~q~q~lA-~s~D~~D~~l~~w~K~~~n--PVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~---- 276 (589)
+|+|-... .+ +.++ .+.|.. ... ..+. .++..+. .....-=|++ ++ .+|+|||+..+..
T Consensus 133 Yl~~g~~~-~g---i~~~eL~~d~~-----~~~-~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~ 198 (279)
T cd08988 133 WLSFGSFW-GG---IKLFELDKDTM-----KPA-EPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRG 198 (279)
T ss_pred EEEecccC-CC---EEEEEECcccC-----Ccc-CCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCC
Confidence 99995421 11 2232 333321 110 0111 1222111 0112335777 55 6899999876431
Q ss_pred -CCeeeEEEEEeCCCC
Q 007810 277 -GKTGISLVYQTTDFK 291 (589)
Q Consensus 277 -~~~G~i~lY~S~Dl~ 291 (589)
+..-.+.+++|+++.
T Consensus 199 ~~~~y~v~~arS~~~~ 214 (279)
T cd08988 199 GDSTYKIAVGRSKNIT 214 (279)
T ss_pred CCCCeEEEEEEeCCCC
Confidence 122357788998763
No 64
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.0003 Score=73.07 Aligned_cols=117 Identities=16% Similarity=0.210 Sum_probs=86.0
Q ss_pred ccCCCCC--ccCCC----cEEEeeEEEccCCeEEEEEccc-----CCCccceEEEEEeCCCCCCCcce-EEEcCCCceec
Q 007810 177 IAMVPDQ--WYDIN----GVWTGSATILPDGQIVMLYTGS-----TDKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLV 244 (589)
Q Consensus 177 ~AL~Pd~--~~D~~----Gv~SGSavv~~dG~~~l~YTG~-----~~~~~q~q~lA~s~D~~D~~l~~-w~K~~~nPVl~ 244 (589)
+.+.|.. .+++. .+|-++++. .+++++|+|-.. .........+|.|+|+ .+ |++. .+|++.
T Consensus 12 pIi~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~ 84 (314)
T COG2152 12 PIITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLW 84 (314)
T ss_pred CceeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEe
Confidence 3445544 24555 789999875 689999999872 2234677889999987 55 9986 489988
Q ss_pred C-CCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEEeCCCCCcEEccccccc
Q 007810 245 P-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (589)
Q Consensus 245 ~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~S~Dl~~W~~~~~l~~~ 302 (589)
| ...++....-||-|.. .+++|+|.+.+..+...+..+.-++|+.+|++.+.++..
T Consensus 85 P~~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 85 PANYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred cCCCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 7 3234455668999953 689999999987555555667889999999999887643
No 65
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.52 E-value=0.0023 Score=65.70 Aligned_cols=137 Identities=16% Similarity=0.102 Sum_probs=81.2
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEe-cc-ccCCCCCccCCCcEEEeeEEEccCCeEEEEEc
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~-~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YT 208 (589)
-|. +++++|+|||||.-+ ...++|+|+|.. .|+. .+ +.+.+.. .......++++.++||+.+|+|.
T Consensus 68 AP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~ 136 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWG 136 (275)
T ss_pred CCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEc
Confidence 465 788899999999854 347899999965 6876 33 3333321 22346678888778899999996
Q ss_pred ccCCCccceEEEE-EeCCCCCCCcceEEEcCCCcee-cCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-C-CeeeEEE
Q 007810 209 GSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G-KTGISLV 284 (589)
Q Consensus 209 G~~~~~~q~q~lA-~s~D~~D~~l~~w~K~~~nPVl-~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~-~~G~i~l 284 (589)
+. ....++ .+.|. .+|+.. ..++ ..+. .-+=-|.+ ++ .+|+|||++.+.. . ..-.+.+
T Consensus 137 ~~-----~~~~i~~l~~d~-----~~~~~~--~~~~~~~~~----~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~y 198 (275)
T cd09004 137 GW-----GHCNVAKLNEDM-----ISFDGE--RDGSEITPK----NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAY 198 (275)
T ss_pred Cc-----CCEEEEEECCCc-----ccccCc--ceeeeccCC----CceecceE-EE-ECCEEEEEEECCCCCCCCceEEE
Confidence 53 112233 34443 555432 1121 1111 12346888 44 6899999887642 1 1224555
Q ss_pred EEeCCCC-CcEEcc
Q 007810 285 YQTTDFK-TYELLD 297 (589)
Q Consensus 285 Y~S~Dl~-~W~~~~ 297 (589)
.+|++.. -|+..+
T Consensus 199 a~s~~~~GP~~~~~ 212 (275)
T cd09004 199 AMADSPLGPFERPG 212 (275)
T ss_pred EEcCCCCCCcccCC
Confidence 6777753 255443
No 66
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.46 E-value=0.0028 Score=65.68 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=82.5
Q ss_pred cCCCcccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEecccc-CCCCCccCCC--cEEEeeEEEccCC
Q 007810 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA-MVPDQWYDIN--GVWTGSATILPDG 201 (589)
Q Consensus 125 P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~A-L~Pd~~~D~~--Gv~SGSavv~~dG 201 (589)
+...+..||+ ++.++|+++|||-..-.....+.--|....+ |...+...+.. ..|...|+.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~-~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMS-NPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECC-CCCccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4456778997 5667899999985422111111223333333 43445433333 3454455544 4677888878899
Q ss_pred eEEEEEcccCC-CccceEEEEEeCCCCCCCc-ceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCe-EEEEEee
Q 007810 202 QIVMLYTGSTD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGS 274 (589)
Q Consensus 202 ~~~l~YTG~~~-~~~q~q~lA~s~D~~D~~l-~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~-w~MviGa 274 (589)
.++|+|++... ......++|+++...+++. ..|+|. .+||+...+.-....---..+ ...++|+ |+|+.=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEcc
Confidence 99999997653 3344567788765433322 258886 478887543100011113344 3456776 8887643
No 67
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.35 E-value=0.0055 Score=63.16 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=76.4
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEEccc
Q 007810 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210 (589)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~ 210 (589)
-|. ++|.+|+|||||-.+. ..-+.|+|++.. .|+..+... ....+++++++||+.+|+|.+.
T Consensus 78 AP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~ 140 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG 140 (269)
T ss_pred CCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC
Confidence 454 6888999999998751 124577777743 676654321 3467788888899999998643
Q ss_pred CCCccceEEEEE-eCCCCCCCcceEEEcCCCce-ecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEEeC
Q 007810 211 TDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (589)
Q Consensus 211 ~~~~~q~q~lA~-s~D~~D~~l~~w~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~S~ 288 (589)
.+.++. +.|. ..+. ...++ +..+. .....+--|++ ++ .+|+|||++.+.......+.+++|+
T Consensus 141 ------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 141 ------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred ------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeC
Confidence 344443 3332 2221 12233 33221 11123345887 45 6899999987542222345678888
Q ss_pred CCCC-cEE
Q 007810 289 DFKT-YEL 295 (589)
Q Consensus 289 Dl~~-W~~ 295 (589)
++.. |+.
T Consensus 205 ~~~GP~~~ 212 (269)
T cd09001 205 SLTGPYES 212 (269)
T ss_pred CCCCCcCC
Confidence 8543 443
No 68
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.34 E-value=0.009 Score=61.52 Aligned_cols=146 Identities=16% Similarity=0.188 Sum_probs=86.7
Q ss_pred ccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEE
Q 007810 130 MNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (589)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~ 206 (589)
+--|. ++|. +|+|||||..+... .+....|+|+|++.. -|+.++..+ |. ..+....++++++||+.+|+
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~ 136 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLL 136 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEE
Confidence 34454 5564 59999999987522 245688999998854 488765433 21 23456788888889999999
Q ss_pred EcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecC-CeeeEEEE
Q 007810 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVY 285 (589)
Q Consensus 207 YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~-~~G~i~lY 285 (589)
|.... .+...++.-.+. +..+ .+.+..... ...+-.|.+ ++ .+|.|||+...... ....+..+
T Consensus 137 ~~~~~---~~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~ 200 (265)
T cd08985 137 YSDRD---NSDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYA 200 (265)
T ss_pred EecCC---CCceEEEEeCCC----cccc---cceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEE
Confidence 97542 133455543321 1233 233332111 124457888 55 68999999765311 11234567
Q ss_pred EeCCCC-CcEEcccc
Q 007810 286 QTTDFK-TYELLDEY 299 (589)
Q Consensus 286 ~S~Dl~-~W~~~~~l 299 (589)
+|+++. .|+..+.+
T Consensus 201 ~s~s~~GP~~~~~~~ 215 (265)
T cd08985 201 TATSILGPWTDLGNP 215 (265)
T ss_pred EecCCCCCccccCcC
Confidence 787754 46655443
No 69
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.28 E-value=0.0075 Score=63.93 Aligned_cols=167 Identities=19% Similarity=0.243 Sum_probs=99.2
Q ss_pred ccccceeeeecC--CCcccCCccceEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEecCc-cCcEeccccCCCCC
Q 007810 115 TWQRTSFHFQPE--KNWMNDPNGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQ 183 (589)
Q Consensus 115 ~w~Rp~~Hf~P~--~gwmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wG~~~WGHA~S~DL-vhW~~~p~AL~Pd~ 183 (589)
.|..++.-.... ...+.||. ++... |+-+|||...+... .+...+-.+.+|+|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 454444333332 24567887 66666 99999998887642 223456677888885 89975 43344332
Q ss_pred c-cCCCcEE--EeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeee
Q 007810 184 W-YDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (589)
Q Consensus 184 ~-~D~~Gv~--SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (589)
. .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.| .+|+... ++ .+ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 1112233 234556678998776554333334556678898876 8997642 11 11 1233567875
Q ss_pred eeCCCCeEEEEEeeecCCeeeEEEEEeCC-CCCcEEccc
Q 007810 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (589)
Q Consensus 261 w~~~~g~w~MviGa~~~~~G~i~lY~S~D-l~~W~~~~~ 298 (589)
.-++|..+|+..... .+...+|.|.| ...|+....
T Consensus 205 -el~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 -ELSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred -EecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 335898888765432 45667888877 589986533
No 70
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.09 E-value=0.018 Score=60.72 Aligned_cols=167 Identities=13% Similarity=0.194 Sum_probs=91.2
Q ss_pred cccccccceeeeec--CCCcc---cCCccceEEC----CEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CcEec-cccC-
Q 007810 112 AMFTWQRTSFHFQP--EKNWM---NDPNGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PIAM- 179 (589)
Q Consensus 112 ~~~~w~Rp~~Hf~P--~~gwm---NDPNG~~y~~----G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~-p~AL- 179 (589)
.|..|+....-|.| ..-|. --|. +++++ |+|+|||.-. ....|.|+|++.. .|+.+ +..|
T Consensus 55 DL~~W~~~g~v~~~~~~~~w~~~~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~ 126 (311)
T cd09003 55 DMVNWTDHGEIFVPNGIAKWAGNSWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLI 126 (311)
T ss_pred CCCCcEEcccccCcCCCCCcccccCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeee
Confidence 34556544444432 22232 2454 67777 9999999632 2357999999954 79874 3222
Q ss_pred CCCC-ccC-CCcEEEeeEEEccCCeEEEEEcccCC----CccceEEEEEeC-CCCCCCcceEEEcCCCceecCCCCCCCC
Q 007810 180 VPDQ-WYD-INGVWTGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPK 252 (589)
Q Consensus 180 ~Pd~-~~D-~~Gv~SGSavv~~dG~~~l~YTG~~~----~~~q~q~lA~s~-D~~D~~l~~w~K~~~nPVl~~p~g~~~~ 252 (589)
.+.. ..+ ......+++++++||+.+|+|.+... ...+...+|... |. .+ ..+.++....+ .
T Consensus 127 ~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~ 194 (311)
T cd09003 127 TGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----Y 194 (311)
T ss_pred cCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----C
Confidence 2211 111 12256888888889999999975321 112334555443 32 22 22333332211 1
Q ss_pred CCCCCeeeeeCCCCeEEEEEeeec-------CCeeeEEEEEeCCCC-CcEEccccc
Q 007810 253 DFRDPTTAWAGPDGKWRLTIGSKI-------GKTGISLVYQTTDFK-TYELLDEYL 300 (589)
Q Consensus 253 ~fRDP~V~w~~~~g~w~MviGa~~-------~~~G~i~lY~S~Dl~-~W~~~~~l~ 300 (589)
.+-=|++ ++ .+|+|||+..+.- .....+.+.+|++.. -|+..+.++
T Consensus 195 ~~Egp~~-~K-~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 195 FFEASGL-HK-INGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred ceEeeeE-EE-ECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 2345777 44 6899999876531 223455566777643 466654444
No 71
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.04 E-value=0.022 Score=59.10 Aligned_cols=143 Identities=15% Similarity=0.059 Sum_probs=81.0
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc-cCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEEc
Q 007810 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (589)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DL-vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YT 208 (589)
+.-|. +++++|+|||||...... + ...-+.|+|+|. --|++. . +.+. .+..++++.++||+.+|+|-
T Consensus 68 ~WAP~-v~~~~g~yy~yy~~~~~~--~-~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~~ 135 (288)
T cd09000 68 IWAPT-IRYHDGTFYLITTNVDGM--K-DGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVGN 135 (288)
T ss_pred eEcce-EEEECCEEEEEEEecCCC--C-CCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEec
Confidence 34465 788899999999876432 2 234567889887 367642 2 2221 45678888877899999886
Q ss_pred ccCCC----ccceEEEEEeCCCCCCCcceEEEcCCCce-ecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeec-CCeeeE
Q 007810 209 GSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGIS 282 (589)
Q Consensus 209 G~~~~----~~q~q~lA~s~D~~D~~l~~w~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G~i 282 (589)
..... ....+.++.... ..++- .+.|+ +..... ....=-|.+ ++ .+|+|||++.... ...-.+
T Consensus 136 ~~~~~~~~~~~~~i~~~~l~~------~~~~~-~~~~~~~~~~~~--~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v 204 (288)
T cd09000 136 GWDERRGYNGHGGIWLQEIDL------ETGKL-LGEPKVIWNGTG--GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSV 204 (288)
T ss_pred ccCCccccCCCCcEEEEEEcc------ccCCC-CCCcEEEEeCCC--CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEE
Confidence 53221 123445554322 11211 12222 111100 112235887 55 6899999885432 122356
Q ss_pred EEEEeCCCC-CcEE
Q 007810 283 LVYQTTDFK-TYEL 295 (589)
Q Consensus 283 ~lY~S~Dl~-~W~~ 295 (589)
.+++|+++. -|+.
T Consensus 205 ~~~~s~~~~Gp~~~ 218 (288)
T cd09000 205 TVARSRSITGPYEP 218 (288)
T ss_pred EEEEeCCCCCCCcc
Confidence 688999876 5655
No 72
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.0078 Score=67.21 Aligned_cols=140 Identities=23% Similarity=0.376 Sum_probs=81.1
Q ss_pred EEEEecCccCcEeccccCCCCC------cc-CCCcEEEeeEEEccCCeEEEEEcccCCCc---cceEEEEEeCCCCCCCc
Q 007810 162 GHAVSADLIHWLYLPIAMVPDQ------WY-DINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLL 231 (589)
Q Consensus 162 GHA~S~DLvhW~~~p~AL~Pd~------~~-D~~Gv~SGSavv~~dG~~~l~YTG~~~~~---~q~q~lA~s~D~~D~~l 231 (589)
.-+.|+||+||+.....|.+.. .+ +..|||..++. .+||+++|+||-..... .-..+..++++..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 3478999999998887565543 21 46789999986 79999999998653211 11122333332211
Q ss_pred ceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCC------eeeEEEEEeCCCCCcEEccc----ccc
Q 007810 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK------TGISLVYQTTDFKTYELLDE----YLH 301 (589)
Q Consensus 232 ~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~------~G~i~lY~S~Dl~~W~~~~~----l~~ 301 (589)
..|.. |+..+-. .--||.+|+ +++|+-||+.|+-... .|++ ++-.|-..-.+.+. ++.
T Consensus 132 G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i~--l~~~~~~~~~l~g~~~~~~~~ 199 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGII--LQEYDKTTQKLVGQGYKIIFD 199 (549)
T ss_pred CCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCccccccccee--eeeccccccccCCccceeEec
Confidence 35653 4443322 124999965 5789888988865221 2333 33333333333333 221
Q ss_pred cCCCCCceeeeeEEEec
Q 007810 302 AVPGTGMWECVDFYPVA 318 (589)
Q Consensus 302 ~~~~~gmwECPdlf~l~ 318 (589)
....+.-|-|-+++.+
T Consensus 200 -G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 200 -GGNGGLTEGPHLYKKT 215 (549)
T ss_pred -cCCCccccCceeeccC
Confidence 1122367999887765
No 73
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.00 E-value=0.024 Score=57.66 Aligned_cols=164 Identities=18% Similarity=0.298 Sum_probs=94.2
Q ss_pred cccceeeeecC--CCcccCCccceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecC-ccCcEeccccCCCCCccCCCcEE
Q 007810 116 WQRTSFHFQPE--KNWMNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVW 191 (589)
Q Consensus 116 w~Rp~~Hf~P~--~gwmNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~ 191 (589)
|-.|+-=+.++ ..=..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.+.......+..
T Consensus 32 Ws~~~~v~~~~~~~~~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~ 109 (275)
T PF13088_consen 32 WSEPRIVADGPKPGRRYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPG 109 (275)
T ss_dssp EEEEEEEETSTBTTCEEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECS
T ss_pred eCCCEEEeeccccCCcccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccc
Confidence 44444333333 22335676 444 499999999666655555444544599999 99999754 23222212223444
Q ss_pred EeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEE
Q 007810 192 TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (589)
Q Consensus 192 SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~Mv 271 (589)
.+.++...+|++++-+.... .......+.+|.|.+ ++|+... ++.. ....--|.++ ...+|..+|+
T Consensus 110 ~~~~i~~~~G~l~~~~~~~~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~-~~~dG~l~~~ 175 (275)
T PF13088_consen 110 RGPPIQLPDGRLIAPYYHES-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIV-ELPDGRLLAV 175 (275)
T ss_dssp EEEEEEECTTEEEEEEEEES-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEE-EETTSEEEEE
T ss_pred eeeeeEecCCCEEEEEeecc-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEE-ECCCCcEEEE
Confidence 55556667998877533221 223566788999986 8998752 2210 0112234543 3478888887
Q ss_pred EeeecCCeeeEEEEEeCC-CCCcEEcc
Q 007810 272 IGSKIGKTGISLVYQTTD-FKTYELLD 297 (589)
Q Consensus 272 iGa~~~~~G~i~lY~S~D-l~~W~~~~ 297 (589)
+-.. . .+.+.+++|.| ..+|+...
T Consensus 176 ~R~~-~-~~~~~~~~S~D~G~TWs~~~ 200 (275)
T PF13088_consen 176 FRTE-G-NDDIYISRSTDGGRTWSPPQ 200 (275)
T ss_dssp EEEC-S-STEEEEEEESSTTSS-EEEE
T ss_pred EEcc-C-CCcEEEEEECCCCCcCCCce
Confidence 6543 2 22667778877 89998743
No 74
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.16 E-value=0.078 Score=53.88 Aligned_cols=146 Identities=17% Similarity=0.083 Sum_probs=79.5
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--cCc-cCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEEcccCCCc---
Q 007810 141 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS--- 214 (589)
Q Consensus 141 G~YHLFYQ~nP~~~~wG~~~WGHA~S--~DL-vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~--- 214 (589)
|+...|+.- +...+...-.-.+| +|. .+|...-.+..+. .....+..++++.+++|+++|||+......
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 455566655 33445555555555 885 7898754433333 123457777777778999999995443221
Q ss_pred cceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEEEEeeecCCeeeEEEEEeCC-CCCc
Q 007810 215 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTY 293 (589)
Q Consensus 215 ~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~i~lY~S~D-l~~W 293 (589)
.......+|.|.| ++|.... .|...+........+.+-+ - -.+|.+++..-........+.++.|+| .+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i-~-~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPI-Q-LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEE-E-ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeee-E-ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238999976 9999863 3322211111112233222 2 258887776322222334455555554 7899
Q ss_pred EEcccc
Q 007810 294 ELLDEY 299 (589)
Q Consensus 294 ~~~~~l 299 (589)
+....+
T Consensus 148 ~~~~~~ 153 (275)
T PF13088_consen 148 SSGSPI 153 (275)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 986554
No 75
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.12 E-value=0.053 Score=56.86 Aligned_cols=134 Identities=15% Similarity=0.189 Sum_probs=73.1
Q ss_pred CCcccCCccceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCC----CCCccC----------CCcEE
Q 007810 127 KNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYD----------INGVW 191 (589)
Q Consensus 127 ~gwmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D----------~~Gv~ 191 (589)
..+.-||+ ++.+ +|+.+|+|-.. .++ .-|+--.+.|+..=.-.+..|. |+..|. ..++.
T Consensus 88 ~~~~IDp~-vf~DdDGk~Yl~~g~~----~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~ 161 (295)
T cd08982 88 PPGLADPA-LFIDDDGRLYLYYGCS----NNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWM 161 (295)
T ss_pred CCCccCCc-eEECCCCCEEEEEecC----CCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccc
Confidence 45678997 5555 59999998421 111 1233334444432111111111 111121 23466
Q ss_pred EeeEEEccCCeEEEEEcccCCC-ccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCCeEEE
Q 007810 192 TGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (589)
Q Consensus 192 SGSavv~~dG~~~l~YTG~~~~-~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~M 270 (589)
-|..+...+|+++|+|++.... ..-.+.+|+|++. +..|++...|||+..+.+. ...--...+ .+..+|+||+
T Consensus 162 EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~ 235 (295)
T cd08982 162 EGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWH 235 (295)
T ss_pred cccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEE
Confidence 7888777899999999865322 2235678888765 3677776678988643321 011112334 3456788887
Q ss_pred EE
Q 007810 271 TI 272 (589)
Q Consensus 271 vi 272 (589)
+.
T Consensus 236 ~y 237 (295)
T cd08982 236 VG 237 (295)
T ss_pred EE
Confidence 65
No 76
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=96.10 E-value=0.61 Score=47.55 Aligned_cols=172 Identities=16% Similarity=0.280 Sum_probs=90.7
Q ss_pred eeeeecCCCcc--cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCCCCCccCCCcEEEeeEE-
Q 007810 120 SFHFQPEKNWM--NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT- 196 (589)
Q Consensus 120 ~~Hf~P~~gwm--NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav- 196 (589)
.--.+|..||. -||- .++++|+||+|....-.+..||.|.. .-+-+|....-| +.. |=..+.-...++
T Consensus 13 g~L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~f-----~~Ftdws~~~sA--~q~-~m~~~~vAP~vFY 83 (271)
T PF03664_consen 13 GPLAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMNF-----GPFTDWSQMASA--SQN-YMDQSAVAPQVFY 83 (271)
T ss_pred CccccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEee-----eccCCHHHhhcc--ccc-cCCcccccceEEE
Confidence 34456888985 6998 89999999999987755555554433 345567665433 211 111111112221
Q ss_pred EccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecC-CCCCCCCCCCCCeeeeeCCCCeEEEEEeee
Q 007810 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 197 v~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
..+...++|.|--... .-....+.|..+| ..|... .|+... ..+ .....-|..|+-+ +..-||... .
T Consensus 84 FaPk~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~-~~~g~iD~~vI~D--~~n~yLFfa-~ 151 (271)
T PF03664_consen 84 FAPKNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGSISG-SGTGPIDQWVICD--DTNMYLFFA-G 151 (271)
T ss_pred ecCCcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--cccccccccC-CCCCceeeEEEec--CCceEEEEc-C
Confidence 1357778888852211 1123345666666 458763 455431 111 1234578888642 333344433 2
Q ss_pred cCCeeeEEEEEeCC-CCCcEEccccc------ccCCCCCceeeeeEEEec
Q 007810 276 IGKTGISLVYQTTD-FKTYELLDEYL------HAVPGTGMWECVDFYPVA 318 (589)
Q Consensus 276 ~~~~G~i~lY~S~D-l~~W~~~~~l~------~~~~~~gmwECPdlf~l~ 318 (589)
. .|. ||||.- +-++ .+.+- .........|.++.|+|.
T Consensus 152 D--nGk--iYRs~~~i~nF--P~~fgs~~~vvmsd~~~nLFEA~~VYkv~ 195 (271)
T PF03664_consen 152 D--NGK--IYRSSMPIGNF--PGGFGSSYTVVMSDTRNNLFEAVQVYKVK 195 (271)
T ss_pred C--CCc--EEEeccchhhC--CCCCCCceEEEEecCccceeeeeEEEEEc
Confidence 2 244 688743 2222 12221 111223489999999997
No 77
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=95.97 E-value=0.091 Score=55.29 Aligned_cols=137 Identities=20% Similarity=0.283 Sum_probs=86.8
Q ss_pred cccccccccceeeeecCCCcccCCccc-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-cCccCcEecc---ccCC
Q 007810 110 TNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IAMV 180 (589)
Q Consensus 110 ~~~~~~w~Rp~~Hf~P~~gwmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S-~DLvhW~~~p---~AL~ 180 (589)
|..++.|++...=+.|.. + .|.+|+ +..++.+||||.-+-.. +...-..|+| .|.+||+..+ ++|.
T Consensus 45 S~Dlv~W~~~~~aL~P~~-~-~d~~g~~SGs~~~~~~~~~~~YTg~~~~---~~~~q~~A~s~d~~~~w~k~~~~~pvi~ 119 (308)
T PF00251_consen 45 SKDLVHWEHLPVALPPDE-E-YDADGCFSGSAVVDDDNLVLFYTGNNRD---GKQVQCLAYSTDDGITWTKYPQGNPVIP 119 (308)
T ss_dssp ESSSSSEEEEEEEE-SSS-G-GGTTEEEEEEEEEETTCEEEEEEEEETT---TEEEEEEEEESSTTSSEEE-TTTCESBE
T ss_pred CCCCCCceeCCceEcccc-c-CCcCccCcceEEEECCEEEEEEeccCCC---CCeEEEEEEECCCCCceEEcCCCCcEEE
Confidence 445778877665566654 3 477773 34678999999876542 1345678999 8899999843 3444
Q ss_pred CCCccCCCcEEEeeEEEccCCeEEEEEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeee
Q 007810 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (589)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (589)
.....+..+.-...++..++|+++|+..+... ......+..|+|+ ++|+.. .++...... ....+=.|.++
T Consensus 120 ~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~Dl-----~~W~~~--~~l~~~~~~-~g~~~ECPdlf 190 (308)
T PF00251_consen 120 EPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDDL-----IHWEYL--GPLFIPGDN-GGGMWECPDLF 190 (308)
T ss_dssp SSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESSS-----SSEEEE--EEESEEETT-TSSEEEEEEEE
T ss_pred ecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCCc-----ccCcee--Ccccccccc-cccccccceEE
Confidence 22222566788899866778999998876544 3445667788885 899986 344332211 11344566664
No 78
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=95.50 E-value=0.4 Score=50.34 Aligned_cols=143 Identities=12% Similarity=0.154 Sum_probs=77.1
Q ss_pred cCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---cEeccccCCCCCccCCCcEEEeeEEEccCCeEEE
Q 007810 131 NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (589)
Q Consensus 131 NDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvh---W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l 205 (589)
--|. ++|+ +++|+||||+.+ ...++|+|..+ |....+.+.....-...|...-.+ +.+|++++|
T Consensus 79 wAPq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YL 147 (303)
T cd08987 79 VAPQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYL 147 (303)
T ss_pred ccCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEE
Confidence 3565 5655 599999999732 35799999654 765433322221112234455555 567999999
Q ss_pred EEcccCCCccceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeeeeeCCCC--eEEEEEeeecCCeee-E
Q 007810 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTGI-S 282 (589)
Q Consensus 206 ~YTG~~~~~~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g--~w~MviGa~~~~~G~-i 282 (589)
||.+... .+..|.... .+|-..-.+++....+.-...-|--|.| .+ .+| +|+|++-|.....++ .
T Consensus 148 ff~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYf 215 (303)
T cd08987 148 FFSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYF 215 (303)
T ss_pred EEecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeE
Confidence 9987432 334443221 1122111123222111111245667888 54 455 999999775321222 2
Q ss_pred EEEEeCCCC-CcEEc
Q 007810 283 LVYQTTDFK-TYELL 296 (589)
Q Consensus 283 ~lY~S~Dl~-~W~~~ 296 (589)
.-++|++|- .|+..
T Consensus 216 rs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 216 RSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEcCCCCCCceec
Confidence 236677764 68876
No 79
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.09 E-value=8 Score=40.87 Aligned_cols=146 Identities=15% Similarity=0.173 Sum_probs=82.8
Q ss_pred CcEEEEEEecC-ccCcEeccccCCCCCccCCCcEEEeeEEEccCCeEEEEEcccCCC----------ccceEEEEEeCCC
Q 007810 158 NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADP 226 (589)
Q Consensus 158 ~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~----------~~q~q~lA~s~D~ 226 (589)
.+....++|.| ..+|... .++..... ....++.++++++.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 56677788887 6899885 34444332 2345788888775559999999765321 2345778899887
Q ss_pred CCCCcceEEEcCCCceecCC--CCCCCCCCCCC--eeeeeCCCCeEEEEEeeecC--CeeeEEEEEeCCCCCcEEccccc
Q 007810 227 SDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDP--TTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDEYL 300 (589)
Q Consensus 227 ~D~~l~~w~K~~~nPVl~~p--~g~~~~~fRDP--~V~w~~~~g~w~MviGa~~~--~~G~i~lY~S~Dl~~W~~~~~l~ 300 (589)
+ .+|.+. ..+.... ..+ ..-++-| -+. -.+|+++|-+-.... ..-..++|..++.+.|++... .
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~--l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~-~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ--MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEG-V 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE--ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCC-C
Confidence 6 899763 1222111 111 1122333 221 247887776544322 122344555555799986432 2
Q ss_pred ccCCCCCceeeeeEEEec
Q 007810 301 HAVPGTGMWECVDFYPVA 318 (589)
Q Consensus 301 ~~~~~~gmwECPdlf~l~ 318 (589)
.. ..++.| |.++++.
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 133556 5677875
No 80
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=90.44 E-value=1.5 Score=43.91 Aligned_cols=105 Identities=26% Similarity=0.446 Sum_probs=67.0
Q ss_pred ceEECC-EEEEEEeeCCCCCCCCCcEEEEEEecCccCcEeccccCC-CCCccCCCcEE--EeeEEEccCCeEEEEEcccC
Q 007810 136 PLFYKG-WYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV-PDQWYDINGVW--TGSATILPDGQIVMLYTGST 211 (589)
Q Consensus 136 ~~y~~G-~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~-Pd~~~D~~Gv~--SGSavv~~dG~~~l~YTG~~ 211 (589)
.++++| .|+++-|-.|.- -|+.....|.-.+-..-+-.|+-|. |.-+|+..|.| -|-||+..+|++.+-|+...
T Consensus 137 tfeh~gk~yyvwaqkdp~i--~gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysasa 214 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNI--KGNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSASA 214 (324)
T ss_pred eeeeCCEEEEEEeccCCCc--cCCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEeccc
Confidence 456777 588999988854 4555556665555433233344443 44466777866 68888889999999999876
Q ss_pred CCccceEEEEEeC---CCCCCCcceEEEcCCCceecC
Q 007810 212 DKSVQVQNLAYPA---DPSDPLLLDWVKYPGNPVLVP 245 (589)
Q Consensus 212 ~~~~q~q~lA~s~---D~~D~~l~~w~K~~~nPVl~~ 245 (589)
.+-.-+.+|-+.. |+-|| ..|+|.+ .||+..
T Consensus 215 td~nycmgllwanen~dlldp--aswtksp-tpvf~t 248 (324)
T COG3940 215 TDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFKT 248 (324)
T ss_pred cccceeeeeeeecccCCcCCc--hhcccCC-Ccceee
Confidence 5433344444433 33344 5899974 788863
No 81
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=90.31 E-value=1.1 Score=47.64 Aligned_cols=86 Identities=26% Similarity=0.477 Sum_probs=48.7
Q ss_pred eeEEEccCCeEEEEEcccCCCcc-ceEEEEEeCCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeee-eeCCCCeEEE
Q 007810 193 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRL 270 (589)
Q Consensus 193 GSavv~~dG~~~l~YTG~~~~~~-q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~~g~w~M 270 (589)
||-|+.+||.+++=-.+..++.. .+-.|-||+|.+ .+|+-..+. .....+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEE
Confidence 44566689998877676655545 366788999865 899865321 12456799987 5 4788777
Q ss_pred EEeeecCCeeeEEEEEeCCC-CCcEEc
Q 007810 271 TIGSKIGKTGISLVYQTTDF-KTYELL 296 (589)
Q Consensus 271 viGa~~~~~G~i~lY~S~Dl-~~W~~~ 296 (589)
+.. .. .|.--+|+|.|. ..|+..
T Consensus 189 ~~~-c~--~g~rrVYeS~DmG~tWtea 212 (310)
T PF13859_consen 189 MTA-CD--DGRRRVYESGDMGTTWTEA 212 (310)
T ss_dssp EEE--T--TS---EEEESSTTSS-EE-
T ss_pred EEe-cc--cceEEEEEEcccceehhhc
Confidence 743 22 255568999884 789874
No 82
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=85.04 E-value=19 Score=38.43 Aligned_cols=158 Identities=20% Similarity=0.191 Sum_probs=86.8
Q ss_pred ccCCccceEECCEEEEEEeeCCC----CCCCCCcEEEEEEecC-ccCcEeccccCCCCCccCCCcE------EEeeEEEc
Q 007810 130 MNDPNGPLFYKGWYHLFYQYNPD----SAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV------WTGSATIL 198 (589)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~----~~~wG~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv------~SGSavv~ 198 (589)
-==|.+.|-.+|+-+|.|...-. ...|....=+.|.|.| .-+|+..+..+.+....- .|+ |.=++...
T Consensus 94 t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~ 172 (316)
T PF13810_consen 94 TVIPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVK 172 (316)
T ss_pred EEcccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccC
Confidence 33478888889998899875411 1123322347899999 899999986655543110 111 22223334
Q ss_pred cCCeEEEEEcccCCCccceEEEEEeC--CCCCCC------cce--EEEcCC--CceecCCCCCCCCCCCCCeeeeeCCCC
Q 007810 199 PDGQIVMLYTGSTDKSVQVQNLAYPA--DPSDPL------LLD--WVKYPG--NPVLVPPRHIGPKDFRDPTTAWAGPDG 266 (589)
Q Consensus 199 ~dG~~~l~YTG~~~~~~q~q~lA~s~--D~~D~~------l~~--w~K~~~--nPVl~~p~g~~~~~fRDP~V~w~~~~g 266 (589)
.||-+|+|=|...+. ....||+-. +..|+. ... |.+... .||+..+-+ --+|.|.+..|
T Consensus 173 ~dgyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~vg-------ElSv~~~~~~g 243 (316)
T PF13810_consen 173 DDGYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPVG-------ELSVRYNEYLG 243 (316)
T ss_pred CCCEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCcc-------ceEEEEeCCCC
Confidence 566666665544332 223444332 221210 012 654321 366654322 33666777789
Q ss_pred eEEEEEeeecCCeeeEEEEEeCCCC-CcEEcccc
Q 007810 267 KWRLTIGSKIGKTGISLVYQTTDFK-TYELLDEY 299 (589)
Q Consensus 267 ~w~MviGa~~~~~G~i~lY~S~Dl~-~W~~~~~l 299 (589)
+|+|+.... ..+.|.+..+++.. .|+-...+
T Consensus 244 k~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l 275 (316)
T PF13810_consen 244 KWVLSYFDA--GTGGIVLRTAPSPTGPWSEPKPL 275 (316)
T ss_pred EEEEEEecc--cCCcEEEEecCCCCCCCCCCeeE
Confidence 999987532 33567777787776 57644443
No 83
>PTZ00334 trans-sialidase; Provisional
Probab=80.05 E-value=11 Score=44.80 Aligned_cols=121 Identities=18% Similarity=0.290 Sum_probs=69.7
Q ss_pred CC-CcEEEEEEec-----CccCcEeccccCCCCC-ccCC---CcEE--EeeEEEccCCeEEEEEcccCCCccceEEEEEe
Q 007810 156 WG-NITWGHAVSA-----DLIHWLYLPIAMVPDQ-WYDI---NGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYP 223 (589)
Q Consensus 156 wG-~~~WGHA~S~-----DLvhW~~~p~AL~Pd~-~~D~---~Gv~--SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~s 223 (589)
|+ ....|+++-. .-|+|.+. ..|.... .... .+.+ -||.|+.+||.+++=-.+..+++..+-.|-||
T Consensus 215 ~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS 293 (780)
T PTZ00334 215 WGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTRLIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYS 293 (780)
T ss_pred CccEEEEEEeecCCCCCcceEECcCc-ccCCccccccccccceeecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEe
Confidence 44 2677887632 25999773 3332111 1011 1111 24455668999886555654444455577899
Q ss_pred CCCCCCCcceEEEcCCCceecCCCCCCCCCCCCCeee-eeCCCCeEEEEEeeecCCeeeEEEEEeCCC-CCcEEc
Q 007810 224 ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRLTIGSKIGKTGISLVYQTTDF-KTYELL 296 (589)
Q Consensus 224 ~D~~D~~l~~w~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~~g~w~MviGa~~~~~G~i~lY~S~Dl-~~W~~~ 296 (589)
+|. .+|+-.. +....+.+||.|+ | ++|+-.|+.. .. .|.-.+|+|.|. ..|+..
T Consensus 294 ~d~-----g~W~ls~---------g~s~~gC~~P~I~EW--e~gkLlM~t~-C~--dG~RrVYES~DmG~tWtEA 349 (780)
T PTZ00334 294 SAT-----ESGNLSK---------GMSADGCSDPSVVEW--KEGKLMMMTA-CD--DGRRRVYESGDKGDSWTEA 349 (780)
T ss_pred cCC-----CCeEEcC---------CCCCCCCCCCEEEEE--cCCeEEEEEE-eC--CCCEEEEEECCCCCChhhC
Confidence 886 3585432 2222456899987 5 3578777643 22 245568999985 789854
No 84
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=75.18 E-value=43 Score=38.29 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=45.7
Q ss_pred cCCCcccCCccceEECCEEEEEEeeCCCCC-CCCCcEEEEEEecCcc--CcEeccccCCCCCccCCCcEEEeeEEEccCC
Q 007810 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSADLI--HWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (589)
Q Consensus 125 P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~-~wG~~~WGHA~S~DLv--hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (589)
|..|=+--|+ ++|++|+|+|+|---+... .|-+++= .++|.+.+ .|.+ |+.+ +. .+.+..|.+.|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~n-yl~t~~s~~G~WsD-pi~l-~~-----~~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAGN-YLVTAESIDGPWSD-PIKL-NG-----SNAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCccccccc-EEEEecCCCCCccc-ceec-CC-----cCccCCceeecCCC
Confidence 5556555676 8899999999994333321 1222221 23332222 3443 1111 11 12677888889999
Q ss_pred eEEEEEcccCC
Q 007810 202 QIVMLYTGSTD 212 (589)
Q Consensus 202 ~~~l~YTG~~~ 212 (589)
+.+|+|-+...
T Consensus 157 r~wlv~~~w~~ 167 (549)
T COG3507 157 RKWLVNGSWDG 167 (549)
T ss_pred CEEEEecccCC
Confidence 99999987643
No 85
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=67.83 E-value=24 Score=37.64 Aligned_cols=95 Identities=17% Similarity=0.304 Sum_probs=54.1
Q ss_pred ccCCeEEEEEcccCCCc-------cceEEEEEeCCCCCCCcceEEEcCCCceecCC---CCCCCCCCCCCeeeeeCCCCe
Q 007810 198 LPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDGK 267 (589)
Q Consensus 198 ~~dG~~~l~YTG~~~~~-------~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p---~g~~~~~fRDP~V~w~~~~g~ 267 (589)
..+|+.||.|..+..-+ ...-.||+|.|.+ .+|++.+ ..+-... ++......-.....+. .++.
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~~g~~~~~~~fq~~a~~-~~dg 175 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFHPGFNQGNWNFQMAAFV-KDDG 175 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-CcccccccccCCcccccccccccccc-CCCC
Confidence 45889999998774311 1245799999976 8999974 2222221 1211000011112222 3455
Q ss_pred EEEEEeeecCCeeeEEEEEe-----CCCCCcEEccc
Q 007810 268 WRLTIGSKIGKTGISLVYQT-----TDFKTYELLDE 298 (589)
Q Consensus 268 w~MviGa~~~~~G~i~lY~S-----~Dl~~W~~~~~ 298 (589)
|+-++|....+.|.+.|+|- .|+..|++-..
T Consensus 176 yVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~g 211 (316)
T PF13810_consen 176 YVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWDG 211 (316)
T ss_pred EEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccCC
Confidence 77777876555677788876 36667776543
No 86
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=51.21 E-value=25 Score=31.35 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=24.1
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007810 29 PASHRKPFKGFAAILASAIFLLSLVALII 57 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (589)
|....|.|..++.|+++++++.+|+++++
T Consensus 10 ~~~~g~sW~~LVGVv~~al~~SlLIalaa 38 (102)
T PF15176_consen 10 PGEGGRSWPFLVGVVVTALVTSLLIALAA 38 (102)
T ss_pred CCCCCcccHhHHHHHHHHHHHHHHHHHHH
Confidence 33347999999999999999999998876
No 87
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=39.91 E-value=5.8e+02 Score=28.60 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=78.6
Q ss_pred CCEEEEEEeeCCCCCCCC------CcEEEEEEecC----ccCcEeccccCCCCCccCC-------CcEEEeeEEEc-cCC
Q 007810 140 KGWYHLFYQYNPDSAVWG------NITWGHAVSAD----LIHWLYLPIAMVPDQWYDI-------NGVWTGSATIL-PDG 201 (589)
Q Consensus 140 ~G~YHLFYQ~nP~~~~wG------~~~WGHA~S~D----LvhW~~~p~AL~Pd~~~D~-------~Gv~SGSavv~-~dG 201 (589)
+|+-.|||...-.+.... -..-|++.+.| +-.|+.+-+.+.||..+-. ...-...++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 699999998733211111 14556777777 5568877777888874321 23457788776 589
Q ss_pred eEEEEEcccCCC--------c------------------------cceEEEEEeCCCCCCCcceEEEcCCCceecCCCCC
Q 007810 202 QIVMLYTGSTDK--------S------------------------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (589)
Q Consensus 202 ~~~l~YTG~~~~--------~------------------------~q~q~lA~s~D~~D~~l~~w~K~~~nPVl~~p~g~ 249 (589)
+.+|+|.|++.. + ...++||...+.. +..|+-+ .|+|... ++
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~-~v 296 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN-GV 296 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET-TT
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc-cc
Confidence 999999987621 0 1346788887642 2578887 5888642 11
Q ss_pred CCCCCCCCeeeeeCCCCeEEEEEeee
Q 007810 250 GPKDFRDPTTAWAGPDGKWRLTIGSK 275 (589)
Q Consensus 250 ~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (589)
....-=|.|+. .+|+||+...++
T Consensus 297 -~de~ERP~iv~--~~gkyYLFt~s~ 319 (428)
T PF02435_consen 297 -NDELERPHIVF--MNGKYYLFTISH 319 (428)
T ss_dssp -BS-EEEEEEEE--ETTEEEEEEEEE
T ss_pred -cccccCCcEEE--ECCEEEEEEEec
Confidence 11223478854 589999998876
No 88
>PF10898 DUF2716: Protein of unknown function (DUF2716); InterPro: IPR020323 This entry represents a group of uncharacterised proteins.
Probab=37.95 E-value=22 Score=33.75 Aligned_cols=36 Identities=25% Similarity=0.591 Sum_probs=27.7
Q ss_pred ccccccceeeeecCCCcccCCc----cceEECCEEEEEEe
Q 007810 113 MFTWQRTSFHFQPEKNWMNDPN----GPLFYKGWYHLFYQ 148 (589)
Q Consensus 113 ~~~w~Rp~~Hf~P~~gwmNDPN----G~~y~~G~YHLFYQ 148 (589)
.|+||.+-|-|.|..---.|+. -++|=+|-||+|.+
T Consensus 80 aLDWQH~cy~~~P~~~~~~~e~~~W~vpv~PdGDYyfF~~ 119 (143)
T PF10898_consen 80 ALDWQHECYWFNPHRHAEKDEFGEWPVPVYPDGDYYFFID 119 (143)
T ss_pred EEecCCCCEEEChhhccccccCCCccccccCCCCeEEEEe
Confidence 4689999999998765544432 36777999999987
No 89
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=33.58 E-value=5.8e+02 Score=26.65 Aligned_cols=71 Identities=18% Similarity=0.404 Sum_probs=39.2
Q ss_pred cCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---cEeccccCCCCCcc-CCCcEEEeeEEEccCCeEE
Q 007810 131 NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWY-DINGVWTGSATILPDGQIV 204 (589)
Q Consensus 131 NDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvh---W~~~p~AL~Pd~~~-D~~Gv~SGSavv~~dG~~~ 204 (589)
--|. ++|+ +..|.|.|||.|. .....+|+|.-+ |.. |..|..+.-- ...|...--+| -++-..+
T Consensus 77 vAP~-vFYFaPk~~W~L~yQwg~~-------~fsY~Ts~DptnpngWSa-pq~lf~g~i~~~~~g~iD~~vI-~D~~n~y 146 (271)
T PF03664_consen 77 VAPQ-VFYFAPKNIWYLAYQWGPA-------AFSYSTSSDPTNPNGWSA-PQPLFSGSISGSGTGPIDQWVI-CDDTNMY 146 (271)
T ss_pred ccce-EEEecCCcEEEEEEecCCC-------cceeecCCCCCCCccCCC-CcccccccccCCCCCceeeEEE-ecCCceE
Confidence 3455 5665 7899999997542 235678888654 754 2223322210 11233333333 3455688
Q ss_pred EEEcccC
Q 007810 205 MLYTGST 211 (589)
Q Consensus 205 l~YTG~~ 211 (589)
||+++..
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 8888753
No 90
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=25.00 E-value=5.4e+02 Score=29.33 Aligned_cols=94 Identities=18% Similarity=0.071 Sum_probs=55.2
Q ss_pred eEECCEEEEEEeeCCCCCCCCCc-EEEEEEecCccCcEec-c-ccCC-CCCccCCCcEEEeeEEEccCCeEEEEEcccCC
Q 007810 137 LFYKGWYHLFYQYNPDSAVWGNI-TWGHAVSADLIHWLYL-P-IAMV-PDQWYDINGVWTGSATILPDGQIVMLYTGSTD 212 (589)
Q Consensus 137 ~y~~G~YHLFYQ~nP~~~~wG~~-~WGHA~S~DLvhW~~~-p-~AL~-Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~ 212 (589)
+.++|.--|||..|-....+.+. .=.-|.|+|.++++.. + +.+. |+. + ..-....=++...+|+.+|+--+...
T Consensus 107 V~~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~p~~-~-t~hFRDPKv~w~~~~~~~~mlgAq~~ 184 (486)
T COG1621 107 VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQPEG-Y-TPHFRDPKVVWDEGGKWWMMLGAQGE 184 (486)
T ss_pred EEeCCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecCCCc-c-cccCCCCcccccCCCcEEEEEEEecC
Confidence 45688888999877664444443 4567999999999983 3 3332 222 1 12233444455667777666443333
Q ss_pred CccceEEEEEeCCCCCCCcceEEEc
Q 007810 213 KSVQVQNLAYPADPSDPLLLDWVKY 237 (589)
Q Consensus 213 ~~~q~q~lA~s~D~~D~~l~~w~K~ 237 (589)
+..-.+.+-.|.| |++|+..
T Consensus 185 ~~~g~i~lY~S~D-----L~~W~~~ 204 (486)
T COG1621 185 DLKGTILLYESDD-----LKNWQFT 204 (486)
T ss_pred CCCceEEEEeCCC-----ccCcEEE
Confidence 2222334444555 4899986
No 91
>PF12111 PNPase_C: Polyribonucleotide phosphorylase C terminal; InterPro: IPR021968 PNPase regulates the expression of small non-coding RNAs that control expression of outer-membrane proteins. The enzyme also affects complex processes, such as the tissue-invasive virulence of Salmonella enterica and the regulation of a virulence-factor secretion system in Yersinia. In Escherichia coli, PNPase is involved in the quality control of ribosomal RNA precursors and is required for growth following cold shock. This family contains the C-terminal protomer domain of the PNPase core. The function of the C-terminal protomer is to catalyse phosphorolysis through its two active sites [].; PDB: 3H1C_S 3GCM_F 3GME_D.
Probab=23.98 E-value=26 Score=25.95 Aligned_cols=11 Identities=36% Similarity=0.887 Sum_probs=0.0
Q ss_pred ccccceeeeec
Q 007810 115 TWQRTSFHFQP 125 (589)
Q Consensus 115 ~w~Rp~~Hf~P 125 (589)
+||||.|.|.-
T Consensus 7 ~W~rp~y~F~G 17 (39)
T PF12111_consen 7 EWQRPAYYFYG 17 (39)
T ss_dssp -----------
T ss_pred ccccccccccc
Confidence 69999999864
No 92
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=23.61 E-value=72 Score=29.28 Aligned_cols=11 Identities=18% Similarity=0.066 Sum_probs=5.7
Q ss_pred CCEEEEEEeeC
Q 007810 140 KGWYHLFYQYN 150 (589)
Q Consensus 140 ~G~YHLFYQ~n 150 (589)
+|.||--+...
T Consensus 81 ~g~~~~~~~~~ 91 (130)
T PF12273_consen 81 QGNFHPNPGPP 91 (130)
T ss_pred CCCCCCCCCCC
Confidence 45666554433
No 93
>PF11807 DUF3328: Domain of unknown function (DUF3328); InterPro: IPR021765 This family of proteins are functionally uncharacterised. This family is only found in eukaryotes.
Probab=20.37 E-value=1.2e+02 Score=29.01 Aligned_cols=11 Identities=18% Similarity=0.643 Sum_probs=5.1
Q ss_pred CCCCCCCchhh
Q 007810 29 PASHRKPFKGF 39 (589)
Q Consensus 29 ~~~~~~~~~~~ 39 (589)
|.+++++++..
T Consensus 3 p~~r~~~w~~~ 13 (217)
T PF11807_consen 3 PRRRRRRWRRL 13 (217)
T ss_pred CCCCCccHHHH
Confidence 34444555544
Done!