Query 007811
Match_columns 589
No_of_seqs 323 out of 1930
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 11:05:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 1E-58 3.4E-63 509.5 13.3 136 444-584 277-497 (498)
2 3dwl_A Actin-related protein 3 100.0 1E-58 3.6E-63 502.3 11.6 265 1-588 142-426 (427)
3 4fo0_A Actin-related protein 8 100.0 1.4E-54 4.7E-59 485.8 7.8 140 444-587 412-593 (593)
4 1k8k_B ARP2, actin-like protei 100.0 9.9E-53 3.4E-57 450.3 14.3 254 1-582 123-388 (394)
5 2fxu_A Alpha-actin-1, actin, a 100.0 1.1E-51 3.7E-56 438.9 15.4 257 1-585 119-375 (375)
6 1k8k_A ARP3, actin-like protei 100.0 7.4E-49 2.5E-53 421.9 14.0 131 453-586 267-415 (418)
7 4am6_A Actin-like protein ARP8 100.0 6E-45 2.1E-49 405.1 3.9 103 1-107 240-347 (655)
8 1jce_A ROD shape-determining p 99.6 4.1E-16 1.4E-20 162.5 5.5 100 5-109 117-216 (344)
9 3h1q_A Ethanolamine utilizatio 99.1 1.1E-10 3.9E-15 117.1 9.8 87 2-104 111-197 (272)
10 1dkg_D Molecular chaperone DNA 98.9 1.4E-10 4.7E-15 122.3 0.9 86 453-559 296-381 (383)
11 2v7y_A Chaperone protein DNAK; 98.7 2.3E-09 8E-14 118.0 2.0 78 5-82 131-211 (509)
12 3qfu_A 78 kDa glucose-regulate 98.6 1.5E-08 5.2E-13 106.7 3.2 77 5-81 175-255 (394)
13 3i33_A Heat shock-related 70 k 98.2 3.8E-07 1.3E-11 96.6 3.5 77 5-81 180-263 (404)
14 1yuw_A Heat shock cognate 71 k 97.8 1.9E-05 6.5E-10 87.8 7.1 77 5-81 161-242 (554)
15 3d2f_A Heat shock protein homo 97.5 0.0001 3.6E-09 83.9 7.5 76 6-81 161-246 (675)
16 2ych_A Competence protein PILM 97.0 0.00069 2.4E-08 70.7 6.6 94 5-109 159-254 (377)
17 4a2a_A Cell division protein F 96.4 0.003 1E-07 67.8 5.7 91 5-106 176-266 (419)
18 4apw_A ALP12; actin-like prote 95.9 0.0051 1.7E-07 63.7 4.3 73 9-82 147-219 (329)
19 2zgy_A Plasmid segregation pro 95.8 0.0066 2.3E-07 62.2 4.9 91 8-102 137-229 (320)
20 3js6_A Uncharacterized PARM pr 95.7 0.0068 2.3E-07 63.6 4.5 76 9-84 152-233 (355)
21 2kho_A Heat shock protein 70; 95.3 0.0044 1.5E-07 69.5 1.3 85 454-559 297-381 (605)
22 2fsj_A Hypothetical protein TA 95.2 0.009 3.1E-07 62.2 3.4 73 10-82 162-239 (346)
23 4ehu_A Activator of 2-hydroxyi 93.6 0.02 6.7E-07 57.2 1.4 66 479-557 187-252 (276)
24 4gni_A Putative heat shock pro 93.3 0.012 3.9E-07 62.2 -0.9 89 454-561 308-402 (409)
25 2ych_A Competence protein PILM 93.1 0.0044 1.5E-07 64.6 -4.5 46 480-528 286-331 (377)
26 2kho_A Heat shock protein 70; 93.0 0.12 4E-06 57.9 6.7 101 6-106 158-276 (605)
27 2d0o_A DIOL dehydratase-reacti 91.2 0.36 1.2E-05 53.3 7.5 79 18-107 390-468 (610)
28 1nbw_A Glycerol dehydratase re 91.2 0.36 1.2E-05 53.4 7.6 79 18-107 392-470 (607)
29 4a2a_A Cell division protein F 90.0 0.14 4.6E-06 54.9 2.9 71 481-558 305-392 (419)
30 4gni_A Putative heat shock pro 88.4 0.38 1.3E-05 50.5 4.9 77 6-82 173-255 (409)
31 4b9q_A Chaperone protein DNAK; 85.3 0.2 7E-06 56.0 0.8 66 480-558 315-380 (605)
32 4b9q_A Chaperone protein DNAK; 80.3 1.4 4.7E-05 49.3 4.9 77 6-82 158-242 (605)
33 3cet_A Conserved archaeal prot 80.3 1.2 3.9E-05 46.4 3.9 25 35-59 127-151 (334)
34 4fo0_A Actin-related protein 8 78.7 0.93 3.2E-05 50.0 2.9 80 1-85 217-296 (593)
35 1t6c_A Exopolyphosphatase; alp 69.6 2.1 7.1E-05 43.9 2.5 41 34-76 137-177 (315)
36 2ews_A Pantothenate kinase; PA 68.4 2.8 9.6E-05 42.6 3.2 72 479-557 214-286 (287)
37 2zgy_A Plasmid segregation pro 67.9 1.2 4.1E-05 45.2 0.4 47 504-557 273-319 (320)
38 3cer_A Possible exopolyphospha 65.4 2.5 8.7E-05 43.8 2.2 42 35-76 146-191 (343)
39 2i7n_A Pantothenate kinase 1; 65.4 3.7 0.00013 43.1 3.4 75 479-557 283-358 (360)
40 4apw_A ALP12; actin-like prote 64.2 1.2 4.1E-05 45.7 -0.5 47 502-558 277-323 (329)
41 3mdq_A Exopolyphosphatase; str 62.2 3.5 0.00012 42.2 2.5 40 35-76 131-170 (315)
42 1hux_A Activator of (R)-2-hydr 61.8 1.5 5.3E-05 43.6 -0.2 48 504-559 209-256 (270)
43 1u6z_A Exopolyphosphatase; alp 50.7 7.7 0.00026 42.4 3.0 39 36-76 138-176 (513)
44 3aap_A Ectonucleoside triphosp 47.1 10 0.00035 39.4 3.1 37 35-71 140-178 (353)
45 2l2l_B Methyl-CPG-binding doma 45.8 37 0.0013 23.7 4.7 26 143-168 6-31 (36)
46 3hi0_A Putative exopolyphospha 45.1 9.9 0.00034 41.5 2.7 39 35-75 140-178 (508)
47 1nbw_A Glycerol dehydratase re 42.0 4.9 0.00017 44.6 -0.4 46 505-555 552-602 (607)
48 1k1f_A Breakpoint cluster regi 40.4 1.2E+02 0.004 24.0 7.3 37 131-167 13-49 (72)
49 2fsj_A Hypothetical protein TA 36.7 5.3 0.00018 41.1 -1.1 47 503-558 296-343 (346)
50 2d0o_A DIOL dehydratase-reacti 36.6 5.5 0.00019 44.1 -1.0 46 505-555 550-600 (610)
51 3js6_A Uncharacterized PARM pr 34.0 2.4 8.1E-05 44.1 -4.3 45 502-558 289-335 (355)
52 4htl_A Beta-glucoside kinase; 33.1 26 0.00088 34.9 3.4 52 505-558 239-290 (297)
53 2gup_A ROK family protein; sug 31.2 40 0.0014 33.0 4.4 52 2-59 88-142 (292)
54 2gup_A ROK family protein; sug 31.2 14 0.00047 36.5 0.9 53 505-557 229-285 (292)
55 2aa4_A Mannac kinase, putative 30.8 16 0.00054 35.9 1.3 52 505-557 235-286 (289)
56 1saz_A Probable butyrate kinas 29.0 21 0.0007 37.2 1.9 73 505-583 297-377 (381)
57 3vkg_A Dynein heavy chain, cyt 28.8 1.2E+03 0.042 31.3 19.5 70 496-576 2242-2312(3245)
58 2yhx_A Hexokinase B; transfera 28.0 47 0.0016 35.7 4.5 52 505-559 385-442 (457)
59 4db3_A Glcnac kinase, N-acetyl 27.7 31 0.0011 34.8 3.0 53 505-557 271-324 (327)
60 2hoe_A N-acetylglucosamine kin 24.5 36 0.0012 35.0 2.8 53 505-557 316-369 (380)
61 3vov_A Glucokinase, hexokinase 24.3 29 0.00098 34.6 1.9 53 505-557 239-293 (302)
62 1oeg_A Apolipoprotein E; siali 22.2 40 0.0014 21.9 1.6 18 314-331 2-19 (26)
63 3htv_A D-allose kinase, alloki 22.2 51 0.0018 33.0 3.3 62 505-566 241-306 (310)
64 2qm1_A Glucokinase; alpha-beta 21.8 25 0.00085 35.0 0.8 54 505-558 264-320 (326)
65 3r8e_A Hypothetical sugar kina 20.8 30 0.001 34.8 1.2 53 505-557 262-317 (321)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-58 Score=509.46 Aligned_cols=136 Identities=27% Similarity=0.440 Sum_probs=128.8
Q ss_pred ccccCCCCCeEEEeCce-eccccccCcCCCCCCC----------------------------------------------
Q 007811 444 RVRPLTKEDFQIVLGVE-RFRCPEILFRPNWVGI---------------------------------------------- 476 (589)
Q Consensus 444 ~~y~lp~~~~~I~lg~E-Rf~~pE~LF~Psl~g~---------------------------------------------- 476 (589)
..|+||+| +.|.||.| ||+|||+||+|+++|.
T Consensus 277 ~~yeLPDG-~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (498)
T 3qb0_A 277 RSIESPWN-EEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQE 355 (498)
T ss_dssp EEEECSSS-CEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC--------------------
T ss_pred eEEECCCC-CEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45788999 99999999 9999999999998865
Q ss_pred ----------------------------------CCCCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHH
Q 007811 477 ----------------------------------DQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSER 522 (589)
Q Consensus 477 ----------------------------------~~~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eR 522 (589)
+..|||++|.+||+ +||+|+|+.||+|||||||+|+||||.+|
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~---~cd~d~r~~L~~nIvLsGGst~~pGf~~R 432 (498)
T 3qb0_A 356 AVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIM---SSDVDLRATLAHNVVLTGGTSSIPGLSDR 432 (498)
T ss_dssp ---------------------------------CCSCCHHHHHHHHHH---TSCTTTHHHHHTTEEEESGGGGSTTHHHH
T ss_pred cccccccccccccccccccccccccccccccccccCCCchHHHHHHHH---hCCHHHHHHHhcCEEEeCCccCchhHHHH
Confidence 56899999999996 67999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCeEEEeC---CCCccceeechhhhcccCCCCccceeHHHHhhhch-HHHHHhh
Q 007811 523 LEAGIRMIRPCGAPIKVVRA---LDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGE-NWLRRYQ 584 (589)
Q Consensus 523 L~~EL~~l~p~~~~v~V~~~---~d~~~~aW~Ggsilasl~~f~~~wITk~EY~E~G~-~iv~~k~ 584 (589)
|++||+.++| .++|+|+++ ++|.|++|+||||||++++|+++||||+||+|+|+ .|||+||
T Consensus 433 l~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 433 LMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp HHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred HHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 9999999999 889999988 68999999999999999999999999999999999 8999998
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-58 Score=502.26 Aligned_cols=265 Identities=26% Similarity=0.434 Sum_probs=219.0
Q ss_pred ChhhhhhhcCCCeEeeehhHHHhhhhhccC---CCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHH
Q 007811 1 MAELLFETYGVPSVAFGVDAAFSYKYNQQY---GICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLK 77 (589)
Q Consensus 1 m~EiLFE~f~vPsv~~~~qsvLSlya~g~~---~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~ 77 (589)
|+|+|||+|+||++|++.+++||+|++|.. ....+||||||+|+++|||+||++|++++++++|+++||+++|+||.
T Consensus 142 ~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~ 221 (427)
T 3dwl_A 142 TAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQ 221 (427)
T ss_dssp HHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred HHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHH
Confidence 589999999999999999999999999821 00147899999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCCCHHHHHHHHhcccccccChHHHHHHHhcCcccccccceeeeCCCCCCCCCCCCCHHHHHHHHHHHH
Q 007811 78 QLLSLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKE 157 (589)
Q Consensus 78 ~lL~~k~~~~~~~~~~~~v~~IKE~~CyVa~Dy~~El~~~~~~~~~~~~~~~~~qlP~~~~~~~~~~t~eel~~~~~rr~ 157 (589)
++|..+|+. ..+.+++++||+++|||++||.+|+..+...+ +
T Consensus 222 ~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~-----------------------~------------ 263 (427)
T 3dwl_A 222 SLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDREP-----------------------D------------ 263 (427)
T ss_dssp HTTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC--------------------------------------
T ss_pred HHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcCc-----------------------c------------
Confidence 999999886 45779999999999999999988876532100 0
Q ss_pred HHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhcchhhh
Q 007811 158 RQGQRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQ 237 (589)
Q Consensus 158 ~~~~RLqe~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~~i~~l~~~~~~~~~~~~~~~ 237 (589)
T Consensus 264 -------------------------------------------------------------------------------- 263 (427)
T 3dwl_A 264 -------------------------------------------------------------------------------- 263 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhcccCCCCCCccCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHH
Q 007811 238 AELEKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQ 317 (589)
Q Consensus 238 ~e~~~~~~~~~~~~~Ll~~pd~~l~~~~~keKr~q~~lk~~~~ar~~~k~~~~~ek~~~~~~~~~~e~~~~~~~~~~~~~ 317 (589)
....|.
T Consensus 264 ---------~~~~~~----------------------------------------------------------------- 269 (427)
T 3dwl_A 264 ---------RYLKYA----------------------------------------------------------------- 269 (427)
T ss_dssp -----------CCBC-----------------------------------------------------------------
T ss_pred ---------ccceeE-----------------------------------------------------------------
Confidence 000111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCCCCCCCCCCchhhHHHHHhhc
Q 007811 318 MRAKYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSR 397 (589)
Q Consensus 318 ~r~~~~~i~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~i~~~~~~~~~~~d~fg~~d~dw~vy~~i~~ 397 (589)
+
T Consensus 270 ---------------------l---------------------------------------------------------- 270 (427)
T 3dwl_A 270 ---------------------S---------------------------------------------------------- 270 (427)
T ss_dssp ---------------------C----------------------------------------------------------
T ss_pred ---------------------e----------------------------------------------------------
Confidence 1
Q ss_pred CCCCCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCC-CeEEEeCceeccccccCcCCCCCCC
Q 007811 398 DNDDDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKE-DFQIVLGVERFRCPEILFRPNWVGI 476 (589)
Q Consensus 398 ~~~~~~~d~e~~~~~l~~le~~L~~~Dp~F~~~~~~~~~~~~~~~~~~y~lp~~-~~~I~lg~ERf~~pE~LF~Psl~g~ 476 (589)
. . |+| .+.|+||.|||+|||+||+|+++|.
T Consensus 271 --------------------------------~--~---------------~~g~~~~i~ig~erf~~pE~LF~P~~~g~ 301 (427)
T 3dwl_A 271 --------------------------------E--S---------------ITGHSTTIDVGFERFLAPEIFFNPEIASS 301 (427)
T ss_dssp ----------------------------------------------------------CBCCTHHHHSGGGGTCGGGTCS
T ss_pred --------------------------------e--C---------------CCCCeeEEEEChHhhhChhhccCchhcCC
Confidence 0 0 111 1578999999999999999999999
Q ss_pred C-CCCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhc--------------CCCCCeEEEe
Q 007811 477 D-QVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIR--------------PCGAPIKVVR 541 (589)
Q Consensus 477 ~-~~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~--------------p~~~~v~V~~ 541 (589)
+ ..||+++|.+||. +||+|+|+.||+|||||||+|+||||.+||++||+.++ |..++|+|++
T Consensus 302 ~~~~gI~~~i~~sI~---~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~ 378 (427)
T 3dwl_A 302 DFLTPLPELVDNVVQ---SSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS 378 (427)
T ss_dssp SCCSCHHHHHHHHHH---TSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEEC
T ss_pred ccCCCccHHHHHHHH---hCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEec
Confidence 9 4999999999996 67999999999999999999999999999999999987 5677899999
Q ss_pred CCCCccceeechhhhcccCCCCccceeHHHHhhhchHHHHHhh-cccC
Q 007811 542 ALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRYQ-LQYT 588 (589)
Q Consensus 542 ~~d~~~~aW~Ggsilasl~~f~~~wITk~EY~E~G~~iv~~k~-~~~~ 588 (589)
+++|.|++|+||||||++++|+++||||+||+|+|++|||+|+ ||.+
T Consensus 379 ~~~r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~~~~~ 426 (427)
T 3dwl_A 379 HKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQIFGNS 426 (427)
T ss_dssp CTTCTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC----
T ss_pred CCccccceecCceeeccccchhheeEEHHHHhhhChHhheecccccCC
Confidence 9999999999999999999999999999999999999999998 5554
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=485.81 Aligned_cols=140 Identities=24% Similarity=0.272 Sum_probs=100.1
Q ss_pred ccccCCCCCeEEEeCceeccccccCcCCCCC--------------------------------CCCCCCcchhHHHHhhc
Q 007811 444 RVRPLTKEDFQIVLGVERFRCPEILFRPNWV--------------------------------GIDQVGLDEMTGVSIRR 491 (589)
Q Consensus 444 ~~y~lp~~~~~I~lg~ERf~~pE~LF~Psl~--------------------------------g~~~~GL~e~I~~sI~~ 491 (589)
..|++|++ +.+.++.+||.+||.||+|+.. +.+..||+++|.+||.
T Consensus 412 ~~~~~p~g-~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~- 489 (593)
T 4fo0_A 412 KSASKPIG-FEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSID- 489 (593)
T ss_dssp ------------------------------------------------------------CHHHHSCCCHHHHHHHHHH-
T ss_pred ccccCCCC-cccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH-
Confidence 45677888 8999999999999999999643 2345799999999996
Q ss_pred CCCCC-hhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCCC-----CCeEEEeCC---CCccceeechhhhcccCCC
Q 007811 492 LPTKD-EDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCG-----APIKVVRAL---DPVLDAWRGASVYATKLQF 562 (589)
Q Consensus 492 ~~~c~-~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~-----~~v~V~~~~---d~~~~aW~Ggsilasl~~f 562 (589)
+|| .|+|+.||+|||||||+|+||||.+||++||..++|.. .+|+|++++ +|.+++|+||||||++++|
T Consensus 490 --~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f 567 (593)
T 4fo0_A 490 --CCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTT 567 (593)
T ss_dssp --TCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGG
T ss_pred --hCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccH
Confidence 578 69999999999999999999999999999999999864 358999887 8999999999999999999
Q ss_pred CccceeHHHHhhhchHHHHHhh-ccc
Q 007811 563 PQQTFSRMDYYEKGENWLRRYQ-LQY 587 (589)
Q Consensus 563 ~~~wITk~EY~E~G~~iv~~k~-~~~ 587 (589)
+++||||+||+|+|++|||+|| |-|
T Consensus 568 ~~~wItk~EYeE~G~~il~~kc~f~~ 593 (593)
T 4fo0_A 568 QELWIYQREWQRFGVRMLRERAAFVW 593 (593)
T ss_dssp GGTCEEHHHHHHHTTHHHHHHCSSCC
T ss_pred HHeeECHHHHHhhCcHHHhhcCCcCC
Confidence 9999999999999999999999 443
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=9.9e-53 Score=450.35 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=158.4
Q ss_pred ChhhhhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhh
Q 007811 1 MAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLL 80 (589)
Q Consensus 1 m~EiLFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL 80 (589)
|+|+|||.|+||++++++++++|+|++| .++|+|||+|+++|+|+||++|+++.+++.++++||.++|++|.++|
T Consensus 123 ~~e~~fe~~~~~~~~~~~~~~~a~~a~g-----~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l 197 (394)
T 1k8k_B 123 IVEVMFETYQFSGVYVAIQAVLTLYAQG-----LLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLL 197 (394)
T ss_dssp ------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHH
T ss_pred HHHHhhhccCCCeEEEEhhHHHHHHhCC-----CceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHH
Confidence 6799999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHhcccccccChHHHHHHHhcCcccccccceeeeCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 007811 81 SLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQG 160 (589)
Q Consensus 81 ~~k~~~~~~~~~~~~v~~IKE~~CyVa~Dy~~El~~~~~~~~~~~~~~~~~qlP~~~~~~~~~~t~eel~~~~~rr~~~~ 160 (589)
..+++++.+..+..++++||+++|||+.||..++....+
T Consensus 198 ~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~----------------------------------------- 236 (394)
T 1k8k_B 198 LLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALE----------------------------------------- 236 (394)
T ss_dssp HHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHH-----------------------------------------
T ss_pred HhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhcc-----------------------------------------
Confidence 999988887789999999999999999887655322100
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhcchhhhhhh
Q 007811 161 QRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAEL 240 (589)
Q Consensus 161 ~RLqe~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~e~ 240 (589)
T Consensus 237 -------------------------------------------------------------------------------- 236 (394)
T 1k8k_B 237 -------------------------------------------------------------------------------- 236 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccCCCCCCccCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHH
Q 007811 241 EKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRA 320 (589)
Q Consensus 241 ~~~~~~~~~~~~Ll~~pd~~l~~~~~keKr~q~~lk~~~~ar~~~k~~~~~ek~~~~~~~~~~e~~~~~~~~~~~~~~r~ 320 (589)
T Consensus 237 -------------------------------------------------------------------------------- 236 (394)
T 1k8k_B 237 -------------------------------------------------------------------------------- 236 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCCCCCCCCCCchhhHHHHHhhcCCC
Q 007811 321 KYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDND 400 (589)
Q Consensus 321 ~~~~i~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~i~~~~~~~~~~~d~fg~~d~dw~vy~~i~~~~~ 400 (589)
. .
T Consensus 237 ------------------~------------------------------------------------------------~ 238 (394)
T 1k8k_B 237 ------------------T------------------------------------------------------------T 238 (394)
T ss_dssp ------------------C------------------------------------------------------------S
T ss_pred ------------------C------------------------------------------------------------C
Confidence 0 0
Q ss_pred CCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCCeEEEeCceeccccccCcCCCCCCCCCCC
Q 007811 401 DDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQIVLGVERFRCPEILFRPNWVGIDQVG 480 (589)
Q Consensus 401 ~~~~d~e~~~~~l~~le~~L~~~Dp~F~~~~~~~~~~~~~~~~~~y~lp~~~~~I~lg~ERf~~pE~LF~Psl~g~~~~G 480 (589)
.....|++|++ +.|+|+.|||+|||+||+|+++|.+..|
T Consensus 239 ----------------------------------------~~~~~~~lpdg-~~i~i~~erf~~~E~Lf~p~~~~~~~~~ 277 (394)
T 1k8k_B 239 ----------------------------------------VLVESYTLPDG-RIIKVGGERFEAPEALFQPHLINVEGVG 277 (394)
T ss_dssp ----------------------------------------TTCEEEECTTS-CEEEECTHHHHTGGGGTCGGGGTCCSCC
T ss_pred ----------------------------------------cCceEEECCCC-CEEEECchhhcChHhhCCchhccCCCCC
Confidence 00123567777 8999999999999999999999999999
Q ss_pred cchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhc-----------CCCCCeEEEeCCCCccce
Q 007811 481 LDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIR-----------PCGAPIKVVRALDPVLDA 549 (589)
Q Consensus 481 L~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~-----------p~~~~v~V~~~~d~~~~a 549 (589)
|+++|.++|. +||+|+|+.|++|||||||+|+||||.+||++||..++ |..++|+|+.+++|.+++
T Consensus 278 i~~~i~~~i~---~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~ 354 (394)
T 1k8k_B 278 VAELLFNTIQ---AADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMV 354 (394)
T ss_dssp HHHHHHHHHH---HSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC------------
T ss_pred HHHHHHHHHH---hCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeE
Confidence 9999999997 46999999999999999999999999999999999988 888889999999999999
Q ss_pred eechhhhcccCCCC-ccceeHHHHhhhchHHHHH
Q 007811 550 WRGASVYATKLQFP-QQTFSRMDYYEKGENWLRR 582 (589)
Q Consensus 550 W~Ggsilasl~~f~-~~wITk~EY~E~G~~iv~~ 582 (589)
|+|||+||++++|+ ++||||+||+|+|++|+|+
T Consensus 355 w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 355 FLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp ----------------------------------
T ss_pred EhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 99999999999999 9999999999999999998
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1.1e-51 Score=438.87 Aligned_cols=257 Identities=29% Similarity=0.542 Sum_probs=230.1
Q ss_pred ChhhhhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhh
Q 007811 1 MAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLL 80 (589)
Q Consensus 1 m~EiLFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL 80 (589)
|+|+|||.|++|++++++++++|+||+| .++|+|||+|+++|+|+||++|+++.+++.++++||.++|++|.++|
T Consensus 119 ~~e~~fe~~g~~~~~~~~e~~aaa~a~g-----~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l 193 (375)
T 2fxu_A 119 MTQIMFETFNVPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 193 (375)
T ss_dssp HHHHHHHTTCCSEEEEEEHHHHHHHHTT-----CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcceEEEccchheeeeecC-----CCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHH
Confidence 4789999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHhcccccccChHHHHHHHhcCcccccccceeeeCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 007811 81 SLKHPQHMTKLTWEKVEDLKMEHCYIAPDYFSEAQLFQKGTKEAEHKTRCWQLPWVPPPTEEPPSEEEIARKAAIKERQG 160 (589)
Q Consensus 81 ~~k~~~~~~~~~~~~v~~IKE~~CyVa~Dy~~El~~~~~~~~~~~~~~~~~qlP~~~~~~~~~~t~eel~~~~~rr~~~~ 160 (589)
..+++++.+..+..++++||+++|||+.||..++.....
T Consensus 194 ~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~----------------------------------------- 232 (375)
T 2fxu_A 194 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAAS----------------------------------------- 232 (375)
T ss_dssp HHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHH-----------------------------------------
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcc-----------------------------------------
Confidence 998887765567889999999999999887655322100
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhcchhhhhhh
Q 007811 161 QRLREMAEAKRSSRINELENQIHGLEFLLQQLEQVEENDIAAFLSDTGYVSRQEIESTLVKLTQSLRKAKGERKVEQAEL 240 (589)
Q Consensus 161 ~RLqe~~~~~r~ekl~~~e~~l~~~~~l~~~~~~~~~~~~~~~L~~~g~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~e~ 240 (589)
T Consensus 233 -------------------------------------------------------------------------------- 232 (375)
T 2fxu_A 233 -------------------------------------------------------------------------------- 232 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccCCCCCCccCCCccCCHHHHHHHHHhhhhccChHHHHHHHHHHHHHHHHHHHHhHHHHHHhhcChHHHHHHHHH
Q 007811 241 EKTDASMNEKYPLIHIPDNMLSLEQLKEKRRQIFLKTTTEGRQRAKQKRVEEELEQEKKNQEEEERRLENPELYVEQMRA 320 (589)
Q Consensus 241 ~~~~~~~~~~~~Ll~~pd~~l~~~~~keKr~q~~lk~~~~ar~~~k~~~~~ek~~~~~~~~~~e~~~~~~~~~~~~~~r~ 320 (589)
T Consensus 233 -------------------------------------------------------------------------------- 232 (375)
T 2fxu_A 233 -------------------------------------------------------------------------------- 232 (375)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhhhhccCCCCCCCCCCchhhHHHHHhhcCCC
Q 007811 321 KYKELSEKIDQRKRLKTNGNHTNGNNTSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSRDND 400 (589)
Q Consensus 321 ~~~~i~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~r~s~a~~~rm~~i~~~~~~~~~~~d~fg~~d~dw~vy~~i~~~~~ 400 (589)
..
T Consensus 233 ------------------~~------------------------------------------------------------ 234 (375)
T 2fxu_A 233 ------------------SS------------------------------------------------------------ 234 (375)
T ss_dssp ------------------CS------------------------------------------------------------
T ss_pred ------------------cC------------------------------------------------------------
Confidence 00
Q ss_pred CCchhhhHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCccCCCCccccCCCCCeEEEeCceeccccccCcCCCCCCCCCCC
Q 007811 401 DDDEEMDENEAELARISARLQEVDPTFVPKQESGPTQSAAEIPRVRPLTKEDFQIVLGVERFRCPEILFRPNWVGIDQVG 480 (589)
Q Consensus 401 ~~~~d~e~~~~~l~~le~~L~~~Dp~F~~~~~~~~~~~~~~~~~~y~lp~~~~~I~lg~ERf~~pE~LF~Psl~g~~~~G 480 (589)
.....|++|++ +.|.|+.|||+|||+||+|+++|.+..|
T Consensus 235 ----------------------------------------~~~~~~~lpdg-~~i~i~~erf~~~E~lf~p~~~~~~~~~ 273 (375)
T 2fxu_A 235 ----------------------------------------SLEKSYELPDG-QVITIGNERFRCPETLFQPSFIGMESAG 273 (375)
T ss_dssp ----------------------------------------TTCEEEECTTS-CEEEESTHHHHHHHTTTCGGGGTCCSCC
T ss_pred ----------------------------------------ccCeEEECCCC-CEEEEChhheechHhhCCCccCCCCCCC
Confidence 00123556777 8899999999999999999999999999
Q ss_pred cchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhcccC
Q 007811 481 LDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATKL 560 (589)
Q Consensus 481 L~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilasl~ 560 (589)
|+++|.++|. +||+++|+.|++|||||||+|+||||.+||++||..+.|...+++|+.+++|.+++|+|||++|+++
T Consensus 274 i~~~i~~~i~---~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l~ 350 (375)
T 2fxu_A 274 IHETTYNSIM---KCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 350 (375)
T ss_dssp HHHHHHHHHH---TSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCG
T ss_pred HHHHHHHHHH---hCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCcc
Confidence 9999999996 5799999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CCCccceeHHHHhhhchHHHHHhhc
Q 007811 561 QFPQQTFSRMDYYEKGENWLRRYQL 585 (589)
Q Consensus 561 ~f~~~wITk~EY~E~G~~iv~~k~~ 585 (589)
+|+++||||+||+|+|++|+|+|||
T Consensus 351 ~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 351 TFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp GGGGGSEEHHHHHHHCGGGGC----
T ss_pred cHhhceeeHHHHhhhChHHHhhhcc
Confidence 9999999999999999999999996
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=7.4e-49 Score=421.94 Aligned_cols=131 Identities=27% Similarity=0.456 Sum_probs=123.5
Q ss_pred eEEEeCceeccccccCcCCCCCCCCC-CCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhc
Q 007811 453 FQIVLGVERFRCPEILFRPNWVGIDQ-VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIR 531 (589)
Q Consensus 453 ~~I~lg~ERf~~pE~LF~Psl~g~~~-~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~ 531 (589)
+.|.|+.|||+|||+||+|+++|.+. .||+++|.++|. +||+++|+.+++|||||||+|+||||.+||++||..++
T Consensus 267 ~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~---~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~ 343 (418)
T 1k8k_A 267 FSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQ---NCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTV 343 (418)
T ss_dssp EEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHH---HSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHH
T ss_pred cEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHH---cCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhh
Confidence 68999999999999999999999886 799999999997 46999999999999999999999999999999999886
Q ss_pred ----------------CCCCCeEEEeCCCCccceeechhhhcccCCCCccceeHHHHhhhchHHHHHhh-cc
Q 007811 532 ----------------PCGAPIKVVRALDPVLDAWRGASVYATKLQFPQQTFSRMDYYEKGENWLRRYQ-LQ 586 (589)
Q Consensus 532 ----------------p~~~~v~V~~~~d~~~~aW~Ggsilasl~~f~~~wITk~EY~E~G~~iv~~k~-~~ 586 (589)
|..++|+|+.+++|.+++|+|||+||++++|+++||||+||+|+|++|+|+|| |+
T Consensus 344 ~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~~f~ 415 (418)
T 1k8k_A 344 DARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFG 415 (418)
T ss_dssp HHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCCCCS
T ss_pred ccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhcccc
Confidence 66778999999999999999999999999999999999999999999999976 65
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=6e-45 Score=405.14 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=96.8
Q ss_pred ChhhhhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhh
Q 007811 1 MAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLL 80 (589)
Q Consensus 1 m~EiLFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL 80 (589)
|+|+|||+|+||++|++.++++|+||+| ..++|||||+|+++|+|+||++|+++++++.|+++||+++|+||.++|
T Consensus 240 m~EIlFE~fgvpavyl~~qavlAlyasG----l~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL 315 (655)
T 4am6_A 240 FIRVLLTELQFQAVAIIQESLATCYGAG----ISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFL 315 (655)
T ss_dssp HHHHHHHTSCCSEEEEEEHHHHHHHHSC----CSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCeeeeccHHHHHHHhCC----CCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHH
Confidence 6899999999999999999999999998 137999999999999999999999999999999999999999999999
Q ss_pred hccCC-----CCCCCCCHHHHHHHHhcccccc
Q 007811 81 SLKHP-----QHMTKLTWEKVEDLKMEHCYIA 107 (589)
Q Consensus 81 ~~k~~-----~~~~~~~~~~v~~IKE~~CyVa 107 (589)
..+|+ +|.+..+.++|++|||++|||+
T Consensus 316 ~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 316 LQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQ 347 (655)
T ss_dssp HHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCC
T ss_pred HHcCCCccccCCCCcchHHHHHHHHHheEEEc
Confidence 99976 5677778999999999999995
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.59 E-value=4.1e-16 Score=162.51 Aligned_cols=100 Identities=15% Similarity=0.014 Sum_probs=80.7
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhccC
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKH 84 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~k~ 84 (589)
.|+.++++.+++.+++++++|+++.......+++|||+|+++|+|+++..|.++. ...+++||.++++.|.+.|..++
T Consensus 117 a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~ 194 (344)
T 1jce_A 117 AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETY 194 (344)
T ss_dssp HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHh
Confidence 6899999999999999999999983211236899999999999999999998774 57889999999999999987552
Q ss_pred CCCCCCCCHHHHHHHHhcccccccC
Q 007811 85 PQHMTKLTWEKVEDLKMEHCYIAPD 109 (589)
Q Consensus 85 ~~~~~~~~~~~v~~IKE~~CyVa~D 109 (589)
. + ..+...++.+|+.+|++..+
T Consensus 195 ~-~--~~~~~~ae~~K~~l~~~~~~ 216 (344)
T 1jce_A 195 R-V--AIGERTAERVKIEIGNVFPS 216 (344)
T ss_dssp C-E--ECCHHHHHHHHHHHCBCSCC
T ss_pred C-c--ccCHHHHHHHHHHHhccCcc
Confidence 1 1 23567788888888777644
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.13 E-value=1.1e-10 Score=117.08 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=74.8
Q ss_pred hhhhhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhh
Q 007811 2 AELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLS 81 (589)
Q Consensus 2 ~EiLFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~ 81 (589)
++.+|+.+++|...+..++.+++++.+ ..+++|||+|+++|.++++.+|.++. ...+++||.++++.|.+.|.
T Consensus 111 ~~~~~~~~g~~~~~i~~e~~A~a~~~~-----~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~ 183 (272)
T 3h1q_A 111 CGHVVAGAGLELVTLVDEPVAAARALG-----INDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK 183 (272)
T ss_dssp HHHHHHHTTCEEEEEECHHHHHHHHHT-----CSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeeeecccHHHHHHHHHc-----CCCEEEEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC
Confidence 356899999999999999999999999 77899999999999999999999874 57899999999999988874
Q ss_pred ccCCCCCCCCCHHHHHHHHhccc
Q 007811 82 LKHPQHMTKLTWEKVEDLKMEHC 104 (589)
Q Consensus 82 ~k~~~~~~~~~~~~v~~IKE~~C 104 (589)
.+...++.+|+++|
T Consensus 184 ---------~~~~~ae~~k~~~~ 197 (272)
T 3h1q_A 184 ---------IPFEEAETIKKDFS 197 (272)
T ss_dssp ---------CCHHHHHHHHHSST
T ss_pred ---------CCHHHHHHHHHhcC
Confidence 34556666666654
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=98.93 E-value=1.4e-10 Score=122.33 Aligned_cols=86 Identities=14% Similarity=0.151 Sum_probs=66.0
Q ss_pred eEEEeCceeccccccCcCCCCCCCCCCCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcC
Q 007811 453 FQIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRP 532 (589)
Q Consensus 453 ~~I~lg~ERf~~pE~LF~Psl~g~~~~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p 532 (589)
..+.|+.+.|. .+|+|.+ ..+.++|..+|..+ + +....+.+|+|+||+|.+|||.++|..++..
T Consensus 296 ~~~~it~~~~~---~~~~~~~-----~~i~~~i~~~l~~~---~--~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--- 359 (383)
T 1dkg_D 296 MNIKVTRAKLE---SLVEDLV-----NRSIELLKVALQDA---G--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK--- 359 (383)
T ss_dssp EEEEEEHHHHH---HHSHHHH-----HHHHHHHHHHHHTT---T--CCTTTCCEEEEESGGGGSHHHHHHHHHHHSS---
T ss_pred EEEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHHc---C--CCHhhCCEEEEecCccccHHHHHHHHHHhCC---
Confidence 34677777775 5667753 46788888998643 3 3445678999999999999999999998831
Q ss_pred CCCCeEEEeCCCCccceeechhhhccc
Q 007811 533 CGAPIKVVRALDPVLDAWRGASVYATK 559 (589)
Q Consensus 533 ~~~~v~V~~~~d~~~~aW~Ggsilasl 559 (589)
.|..+.+|.+++|+||+++|++
T Consensus 360 -----~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 360 -----EPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp -----CCBCSSCTTTHHHHHHHHHTTT
T ss_pred -----CCCCCcChHHHHHHHHHHHHHh
Confidence 2456788999999999999864
No 11
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=98.72 E-value=2.3e-09 Score=118.04 Aligned_cols=78 Identities=13% Similarity=-0.038 Sum_probs=59.7
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeec--CCcc-ccccceecccccchhHHHHHHhhh
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFV--EGEP-VYRGSCRTNIGGYHITDYLKQLLS 81 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~--eG~~-l~~a~~rl~~GG~~lt~~L~~lL~ 81 (589)
.++..+++.+.+.+.+.+++++++.......+.+|+|+|+++|+|+.+. +|.. +.......++||.+++..|.++|.
T Consensus 131 a~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 210 (509)
T 2v7y_A 131 AGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLV 210 (509)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence 4678899999999999999999872211135799999999999999665 3543 333345579999999999988775
Q ss_pred c
Q 007811 82 L 82 (589)
Q Consensus 82 ~ 82 (589)
.
T Consensus 211 ~ 211 (509)
T 2v7y_A 211 N 211 (509)
T ss_dssp H
T ss_pred H
Confidence 3
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=98.58 E-value=1.5e-08 Score=106.67 Aligned_cols=77 Identities=12% Similarity=-0.047 Sum_probs=56.3
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccCC-CCCCcceeeeCCCcceEEEee--cCCccccccc-eecccccchhHHHHHHhh
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQYG-ICNKDGLAICPGFSTTHVIPF--VEGEPVYRGS-CRTNIGGYHITDYLKQLL 80 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~~-~~~~tGLVVD~G~~~T~VvPV--~eG~~l~~a~-~rl~~GG~~lt~~L~~lL 80 (589)
.++..+++.+.+.+.++++.++++... ....+.+|||+|.++|.+..+ ..|..-..+. ...++||.++++.|.+.|
T Consensus 175 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 175 AGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 357789999999999999999997221 112345999999999976644 4554333333 347999999999998877
Q ss_pred h
Q 007811 81 S 81 (589)
Q Consensus 81 ~ 81 (589)
.
T Consensus 255 ~ 255 (394)
T 3qfu_A 255 I 255 (394)
T ss_dssp H
T ss_pred H
Confidence 4
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=98.24 E-value=3.8e-07 Score=96.58 Aligned_cols=77 Identities=16% Similarity=0.033 Sum_probs=57.2
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccCCC----CCCcceeeeCCCcceEEEeec--CCcc-ccccceecccccchhHHHHH
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQYGI----CNKDGLAICPGFSTTHVIPFV--EGEP-VYRGSCRTNIGGYHITDYLK 77 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~~~----~~~tGLVVD~G~~~T~VvPV~--eG~~-l~~a~~rl~~GG~~lt~~L~ 77 (589)
.++..+++.+.+.+.+..+.++++.... ...+.+|||+|.++|.+..+- +|.. +.......++||.+++..|.
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 4677899999999999999999873211 123459999999999997653 3332 22234458999999999998
Q ss_pred Hhhh
Q 007811 78 QLLS 81 (589)
Q Consensus 78 ~lL~ 81 (589)
+.|.
T Consensus 260 ~~l~ 263 (404)
T 3i33_A 260 SHLA 263 (404)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7774
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=97.82 E-value=1.9e-05 Score=87.82 Aligned_cols=77 Identities=13% Similarity=0.009 Sum_probs=58.2
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccCCC--CCCcceeeeCCCcceEEEeec--CCcc-ccccceecccccchhHHHHHHh
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQYGI--CNKDGLAICPGFSTTHVIPFV--EGEP-VYRGSCRTNIGGYHITDYLKQL 79 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~~~--~~~tGLVVD~G~~~T~VvPV~--eG~~-l~~a~~rl~~GG~~lt~~L~~l 79 (589)
.++..|++.+.+.+.+..+.++++.... ...+.+|+|+|.++|.|.-+- +|.. +.......++||.+++..|...
T Consensus 161 A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 4566789999999999999988873211 135689999999999998665 5643 2334455789999999998877
Q ss_pred hh
Q 007811 80 LS 81 (589)
Q Consensus 80 L~ 81 (589)
|.
T Consensus 241 l~ 242 (554)
T 1yuw_A 241 FI 242 (554)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 15
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=97.52 E-value=0.0001 Score=83.87 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=56.2
Q ss_pred hhhcCCCeEeeehhHHHhhhhhccCC-------CCCCcceeeeCCCcceEEEeec--CCcc-ccccceecccccchhHHH
Q 007811 6 FETYGVPSVAFGVDAAFSYKYNQQYG-------ICNKDGLAICPGFSTTHVIPFV--EGEP-VYRGSCRTNIGGYHITDY 75 (589)
Q Consensus 6 FE~f~vPsv~~~~qsvLSlya~g~~~-------~~~~tGLVVD~G~~~T~VvPV~--eG~~-l~~a~~rl~~GG~~lt~~ 75 (589)
++.-|++.+.+.+.+..+.+++|... ....+.+|+|+|+++|.|.-+- +|.. +.....-.++||.+++..
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 45568889999999999988876210 1134689999999999998664 5644 333334578999999999
Q ss_pred HHHhhh
Q 007811 76 LKQLLS 81 (589)
Q Consensus 76 L~~lL~ 81 (589)
|...|.
T Consensus 241 l~~~l~ 246 (675)
T 3d2f_A 241 ITEHFA 246 (675)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987764
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=97.03 E-value=0.00069 Score=70.75 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=71.4
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccC--CCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhc
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQY--GICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSL 82 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~--~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~ 82 (589)
+++..|++.+.+.+.++.+.++++.. .......+|||+|+++|.++.+.+|.++. ...+++||.++|+.|.+-+
T Consensus 159 ~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~~-- 234 (377)
T 2ych_A 159 ALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARSF-- 234 (377)
T ss_dssp HHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHT--
T ss_pred HHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHHh--
Confidence 57888999999999999988876410 00112359999999999999999998875 5778999999999998743
Q ss_pred cCCCCCCCCCHHHHHHHHhcccccccC
Q 007811 83 KHPQHMTKLTWEKVEDLKMEHCYIAPD 109 (589)
Q Consensus 83 k~~~~~~~~~~~~v~~IKE~~CyVa~D 109 (589)
..+...++.+|..+|++..+
T Consensus 235 -------~~~~~~aE~~K~~~~~~~~~ 254 (377)
T 2ych_A 235 -------NLDLLAAEEVKRTYGMATLP 254 (377)
T ss_dssp -------TCCHHHHHHHHHHTC-----
T ss_pred -------CCCHHHHHHHHhhccccccc
Confidence 23578899999999987643
No 17
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.36 E-value=0.003 Score=67.80 Aligned_cols=91 Identities=13% Similarity=0.179 Sum_probs=71.9
Q ss_pred hhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhccC
Q 007811 5 LFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKH 84 (589)
Q Consensus 5 LFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~k~ 84 (589)
+++.-++.-..+...++.+.++...........+|||+|+++|.+.-+.+|.+.. ...+++||.++|+-+.+.|.
T Consensus 176 ~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~l~--- 250 (419)
T 4a2a_A 176 FLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAVLD--- 250 (419)
T ss_dssp HHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHHHHHHHHT---
T ss_pred HHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHHHHHHHHC---
Confidence 4566678888899999999888762110113579999999999999999998876 56789999999999987663
Q ss_pred CCCCCCCCHHHHHHHHhccccc
Q 007811 85 PQHMTKLTWEKVEDLKMEHCYI 106 (589)
Q Consensus 85 ~~~~~~~~~~~v~~IKE~~CyV 106 (589)
.+...++.+|.+++..
T Consensus 251 ------~~~~~AE~iK~~~g~a 266 (419)
T 4a2a_A 251 ------TSFEESERLIITHGNA 266 (419)
T ss_dssp ------CCHHHHHHHHHHHCCS
T ss_pred ------CCHHHHHHHHHHhccC
Confidence 4678999999988754
No 18
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=95.87 E-value=0.0051 Score=63.72 Aligned_cols=73 Identities=10% Similarity=-0.028 Sum_probs=60.3
Q ss_pred cCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhc
Q 007811 9 YGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSL 82 (589)
Q Consensus 9 f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~ 82 (589)
+.|..+.+.++++-++|.... .....+.+|||+|+++|.++-+..|.++...+..+++||.++++-+.+.|..
T Consensus 147 i~I~~v~v~pe~~ga~~~~~~-~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 147 FEITDITIKAEGSGVLFLEQE-NFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEEEEEEHHHHHHHHSCC-CCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEEeEEEEEeccHHHHhhcch-hhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 345679999999999987621 1113567899999999999999999998877889999999999999988876
No 19
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=95.83 E-value=0.0066 Score=62.20 Aligned_cols=91 Identities=16% Similarity=-0.020 Sum_probs=66.4
Q ss_pred hcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccc-cccceecccccchhHHHHHHhhhccCCC
Q 007811 8 TYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPV-YRGSCRTNIGGYHITDYLKQLLSLKHPQ 86 (589)
Q Consensus 8 ~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l-~~a~~rl~~GG~~lt~~L~~lL~~k~~~ 86 (589)
.+++..+.+.++++.++++.+.........+|||+|+++|.+.-+.+|.+. ......+++||.++++.+.+.|..++
T Consensus 137 ~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~-- 214 (320)
T 2zgy_A 137 TFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR-- 214 (320)
T ss_dssp CCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS--
T ss_pred EEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC--
Confidence 455678888999998888765111113467999999999999999888764 43457779999999999999887542
Q ss_pred CCCCCCHHHHHHH-Hhc
Q 007811 87 HMTKLTWEKVEDL-KME 102 (589)
Q Consensus 87 ~~~~~~~~~v~~I-KE~ 102 (589)
. .++...++.+ |..
T Consensus 215 ~--~i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 215 T--KGSSYLADDIIIHR 229 (320)
T ss_dssp B--GGGHHHHHHHHHTT
T ss_pred C--CCCHHHHHHHHHHh
Confidence 2 2355566666 544
No 20
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=95.71 E-value=0.0068 Score=63.57 Aligned_cols=76 Identities=14% Similarity=-0.032 Sum_probs=61.0
Q ss_pred cCCCeEeeehhHHHhhhhhccCCC------CCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhc
Q 007811 9 YGVPSVAFGVDAAFSYKYNQQYGI------CNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSL 82 (589)
Q Consensus 9 f~vPsv~~~~qsvLSlya~g~~~~------~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~ 82 (589)
+.|..|.+.++++.++|+.+.... .....+|||+|+++|.++-+..|.++...+..+++||..+++-+.+.|..
T Consensus 152 i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~ 231 (355)
T 3js6_A 152 INVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSK 231 (355)
T ss_dssp EEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC-
T ss_pred EEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHH
Confidence 456789999999999998751100 13457899999999999999888888888889999999999999999987
Q ss_pred cC
Q 007811 83 KH 84 (589)
Q Consensus 83 k~ 84 (589)
++
T Consensus 232 ~~ 233 (355)
T 3js6_A 232 KS 233 (355)
T ss_dssp --
T ss_pred hc
Confidence 64
No 21
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.28 E-value=0.0044 Score=69.53 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=61.4
Q ss_pred EEEeCceeccccccCcCCCCCCCCCCCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCC
Q 007811 454 QIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPC 533 (589)
Q Consensus 454 ~I~lg~ERf~~pE~LF~Psl~g~~~~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~ 533 (589)
.+.|+.+.|. -+|.|-+ ..+...|..+|..+ . +...-...|+|+||+|.+|++.++|...+..
T Consensus 297 ~~~itr~~fe---~l~~~~~-----~~i~~~i~~~L~~a---~--~~~~~i~~VvLvGG~srip~v~~~l~~~fg~---- 359 (605)
T 2kho_A 297 NIKVTRAKLE---SLVEDLV-----NRSIEPLKVALQDA---G--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK---- 359 (605)
T ss_dssp EEEEEHHHHH---TTCCSTT-----GGGTSHHHHHHHTT---T--CCTTTCSEEEEESGGGGSHHHHHHHHHHHSS----
T ss_pred EEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHHc---C--CChhhCceEEEECCcccChHHHHHHHHhcCC----
Confidence 3456655553 5666643 45778888888632 2 2334458999999999999999999888731
Q ss_pred CCCeEEEeCCCCccceeechhhhccc
Q 007811 534 GAPIKVVRALDPVLDAWRGASVYATK 559 (589)
Q Consensus 534 ~~~v~V~~~~d~~~~aW~Ggsilasl 559 (589)
.+..+.+|..++|.||+++|..
T Consensus 360 ----~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 360 ----EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp ----CCBCSSCTTTHHHHHHHHHHTT
T ss_pred ----CcCcCCCcchHHHHHHHHHHHH
Confidence 2345678899999999999864
No 22
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=95.23 E-value=0.009 Score=62.24 Aligned_cols=73 Identities=21% Similarity=0.134 Sum_probs=54.1
Q ss_pred CCCeEeeehhHHHhhhhh--ccC-CCCCCcceeeeCCCcceEEEeec--CCccccccceecccccchhHHHHHHhhhc
Q 007811 10 GVPSVAFGVDAAFSYKYN--QQY-GICNKDGLAICPGFSTTHVIPFV--EGEPVYRGSCRTNIGGYHITDYLKQLLSL 82 (589)
Q Consensus 10 ~vPsv~~~~qsvLSlya~--g~~-~~~~~tGLVVD~G~~~T~VvPV~--eG~~l~~a~~rl~~GG~~lt~~L~~lL~~ 82 (589)
+|..+++.++++.++++. +.. .....+.+|||+|+++|.|.-+. +|.++...+..+++||.++++.+.+.+..
T Consensus 162 ~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 162 NITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK 239 (346)
T ss_dssp EEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence 356688999999988874 310 00013349999999999999887 67766666788899999999888765544
No 23
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=93.58 E-value=0.02 Score=57.17 Aligned_cols=66 Identities=18% Similarity=0.297 Sum_probs=49.8
Q ss_pred CCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 479 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 479 ~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
.|+.+.|...+. ..-.+......|+|+||.|..|++.++|.+.+. .+++.|++|.+.+=+|++++|
T Consensus 187 a~~~~~v~~~l~-----~~~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A 252 (276)
T 4ehu_A 187 AGIHTSVAKRVS-----SLVKRIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYA 252 (276)
T ss_dssp HHHHHHHHHHHH-----HHHHHHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HHHHhcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHH
Confidence 355555555553 233445566899999999999999999987662 357778899998889999988
No 24
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=93.27 E-value=0.012 Score=62.25 Aligned_cols=89 Identities=18% Similarity=0.333 Sum_probs=59.0
Q ss_pred EEEeCceeccccccCcCCCCCCCCCCCcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCC
Q 007811 454 QIVLGVERFRCPEILFRPNWVGIDQVGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPC 533 (589)
Q Consensus 454 ~I~lg~ERf~~pE~LF~Psl~g~~~~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~ 533 (589)
.+.|..+.|. -+|.|.+ ..+.++|..+|... .........|+|+||+|.+|++.++|...+.
T Consensus 308 ~~~itr~~~~---~~~~~~~-----~~i~~~i~~~l~~~-----~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~----- 369 (409)
T 4gni_A 308 ASTINRLRYE---TIARTVF-----EGFNRLVESAVKKA-----GLDPLDVDEVIMSGGTSNTPRIAANFRYIFP----- 369 (409)
T ss_dssp EEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHHT-----TCCGGGCCEEEEESGGGGCHHHHHHHHHHSC-----
T ss_pred EEEeeHHHHH---HHHHHHH-----HHHHHHHHHHHHHc-----CCCHHHCCEEEEECCccccHHHHHHHHHHcC-----
Confidence 4455544442 3455532 34666667777532 2223446889999999999999999987752
Q ss_pred CCCeEE------EeCCCCccceeechhhhcccCC
Q 007811 534 GAPIKV------VRALDPVLDAWRGASVYATKLQ 561 (589)
Q Consensus 534 ~~~v~V------~~~~d~~~~aW~Ggsilasl~~ 561 (589)
.+++| ..+.+|..++=.||++.|....
T Consensus 370 -~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 370 -ESTRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp -TTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred -CccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 22455 3446888999999999987643
No 25
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.10 E-value=0.0044 Score=64.63 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=33.5
Q ss_pred CcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHH
Q 007811 480 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIR 528 (589)
Q Consensus 480 GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~ 528 (589)
.|.+.|..+|..+ +.........+|+||||+|.+|||.++|...+.
T Consensus 286 ~i~~~i~~~l~~~---~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 286 ELTQELRRSLEFF---RIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHHHHH---HHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH---HhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 4556666666422 334555678999999999999999999999984
No 26
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=92.99 E-value=0.12 Score=57.94 Aligned_cols=101 Identities=14% Similarity=-0.064 Sum_probs=66.0
Q ss_pred hhhcCCCeEeeehhHHHhhhhhccCCC-CCCcceeeeCCCcceEEEeecC------Ccc-ccccceecccccchhHHHHH
Q 007811 6 FETYGVPSVAFGVDAAFSYKYNQQYGI-CNKDGLAICPGFSTTHVIPFVE------GEP-VYRGSCRTNIGGYHITDYLK 77 (589)
Q Consensus 6 FE~f~vPsv~~~~qsvLSlya~g~~~~-~~~tGLVVD~G~~~T~VvPV~e------G~~-l~~a~~rl~~GG~~lt~~L~ 77 (589)
.+.-|++.+.+.+.+..+.++++.... ...+.+|+|+|.++|.|.-+-- |.. +.....-.++||.+++..|.
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~ 237 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHH
Confidence 355678889999999999988873211 1245899999999999987653 432 12223346899999999998
Q ss_pred Hhhhcc-----CCCCCCC-----CCHHHHHHHHhccccc
Q 007811 78 QLLSLK-----HPQHMTK-----LTWEKVEDLKMEHCYI 106 (589)
Q Consensus 78 ~lL~~k-----~~~~~~~-----~~~~~v~~IKE~~CyV 106 (589)
..|..+ +..+... .-...++.+|+.++..
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~ 276 (605)
T 2kho_A 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA 276 (605)
T ss_dssp HHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCC
Confidence 877553 2222210 0024566777766543
No 27
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=91.22 E-value=0.36 Score=53.34 Aligned_cols=79 Identities=11% Similarity=-0.048 Sum_probs=60.0
Q ss_pred hhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhccCCCCCCCCCHHHHH
Q 007811 18 VDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVE 97 (589)
Q Consensus 18 ~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~k~~~~~~~~~~~~v~ 97 (589)
.++++|-+++-..+....-..|||+|.++|.+.-+.+|..+. ...+++||.++|.-+..-|.. -+...++
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA~~Lgt--------~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMIIARELGL--------EDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHHHHHHTC--------CCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 445555555532222334577899999999999999998887 778999999999999888853 2488999
Q ss_pred HHHhcccccc
Q 007811 98 DLKMEHCYIA 107 (589)
Q Consensus 98 ~IKE~~CyVa 107 (589)
+||. |+.+-
T Consensus 460 rIK~-YG~A~ 468 (610)
T 2d0o_A 460 EIKK-YPLAK 468 (610)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 76654
No 28
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=91.19 E-value=0.36 Score=53.42 Aligned_cols=79 Identities=14% Similarity=0.037 Sum_probs=59.7
Q ss_pred hhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhhhccCCCCCCCCCHHHHH
Q 007811 18 VDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLLSLKHPQHMTKLTWEKVE 97 (589)
Q Consensus 18 ~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL~~k~~~~~~~~~~~~v~ 97 (589)
.++++|-+++-..+....-..|||+|.++|.+.-+.+|..+. ...+++||.++|.-+..-|.. -+...++
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~--------~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGL--------EDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTC--------SCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 344555555432222334577899999999999999998887 778999999999999888853 2488999
Q ss_pred HHHhcccccc
Q 007811 98 DLKMEHCYIA 107 (589)
Q Consensus 98 ~IKE~~CyVa 107 (589)
+||. |+.+-
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 76654
No 29
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=89.95 E-value=0.14 Score=54.89 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=43.0
Q ss_pred cchhHHHHhhcCCCC--ChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEe-----C----------C
Q 007811 481 LDEMTGVSIRRLPTK--DEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVR-----A----------L 543 (589)
Q Consensus 481 L~e~I~~sI~~~~~c--~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~-----~----------~ 543 (589)
|.+.|..+|..+ .. |......+...||||||+|++||+.+.+...+.. +++|.. | .
T Consensus 305 i~~~V~~~L~~~-~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 305 IMSKSKKFFREV-EAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHH-TTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHc-CCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC------CeEEEecCCCCchhccCcccccC
Confidence 445555666432 11 1111345678899999999999999999998842 344443 2 3
Q ss_pred CCccceeechhhhcc
Q 007811 544 DPVLDAWRGASVYAT 558 (589)
Q Consensus 544 d~~~~aW~Ggsilas 558 (589)
+|.|++=+|-.+++.
T Consensus 378 ~P~~~t~~Gl~~~~~ 392 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVS 392 (419)
T ss_dssp CGGGHHHHHTTCC--
T ss_pred CchHHHHHHHHHHHh
Confidence 677887777777664
No 30
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=88.38 E-value=0.38 Score=50.49 Aligned_cols=77 Identities=13% Similarity=-0.010 Sum_probs=53.7
Q ss_pred hhhcCCCeEeeehhHHHhhhhhccCC---CCCCcceeeeCCCcceEEEee--cCCccc-cccceecccccchhHHHHHHh
Q 007811 6 FETYGVPSVAFGVDAAFSYKYNQQYG---ICNKDGLAICPGFSTTHVIPF--VEGEPV-YRGSCRTNIGGYHITDYLKQL 79 (589)
Q Consensus 6 FE~f~vPsv~~~~qsvLSlya~g~~~---~~~~tGLVVD~G~~~T~VvPV--~eG~~l-~~a~~rl~~GG~~lt~~L~~l 79 (589)
.+.-++..+.+...+..+.++++... ....+.+|+|+|.++|.+.-+ .+|..- .....-.++||.+++..|...
T Consensus 173 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~ 252 (409)
T 4gni_A 173 AAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDH 252 (409)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHH
T ss_pred HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 34457788999999999999987321 113468999999999998754 333221 111234799999999998887
Q ss_pred hhc
Q 007811 80 LSL 82 (589)
Q Consensus 80 L~~ 82 (589)
|..
T Consensus 253 l~~ 255 (409)
T 4gni_A 253 FSK 255 (409)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 31
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=85.35 E-value=0.2 Score=55.96 Aligned_cols=66 Identities=15% Similarity=0.165 Sum_probs=47.1
Q ss_pred CcchhHHHHhhcCCCCChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhcc
Q 007811 480 GLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 558 (589)
Q Consensus 480 GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilas 558 (589)
.+...|..+|... .+...-...|+|+||+|.+|++.++|...+.. .+....+|..++=.||++.|.
T Consensus 315 ~i~~~v~~~L~~a-----~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 315 RSIEPLKVALQDA-----GLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp HTTHHHHHHHHHT-----TCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------CCCSSSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCHHHCcEEEEeCCccCchHHHHHHHHHhcc--------CcCCCcChhHHHHHhHHHHHH
Confidence 4556666777532 22223357899999999999999999888721 234456788888899998875
No 32
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=80.27 E-value=1.4 Score=49.27 Aligned_cols=77 Identities=13% Similarity=-0.053 Sum_probs=53.9
Q ss_pred hhhcCCCeEeeehhHHHhhhhhccCC-CCCCcceeeeCCCcceEEEeecCCc------c-ccccceecccccchhHHHHH
Q 007811 6 FETYGVPSVAFGVDAAFSYKYNQQYG-ICNKDGLAICPGFSTTHVIPFVEGE------P-VYRGSCRTNIGGYHITDYLK 77 (589)
Q Consensus 6 FE~f~vPsv~~~~qsvLSlya~g~~~-~~~~tGLVVD~G~~~T~VvPV~eG~------~-l~~a~~rl~~GG~~lt~~L~ 77 (589)
.+.-|++.+.+.+.+..+.+++|... ....+-+|+|+|.+++.|.-+--+. . +.....-..+||.+++..|.
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~ 237 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHH
Confidence 34557888999999999999887321 1124578999999999998654332 1 11122335789999999888
Q ss_pred Hhhhc
Q 007811 78 QLLSL 82 (589)
Q Consensus 78 ~lL~~ 82 (589)
+.|..
T Consensus 238 ~~l~~ 242 (605)
T 4b9q_A 238 NYLVE 242 (605)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 33
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=80.26 E-value=1.2 Score=46.40 Aligned_cols=25 Identities=36% Similarity=0.549 Sum_probs=23.4
Q ss_pred CcceeeeCCCcceEEEeecCCcccc
Q 007811 35 KDGLAICPGFSTTHVIPFVEGEPVY 59 (589)
Q Consensus 35 ~tGLVVD~G~~~T~VvPV~eG~~l~ 59 (589)
.+||+||+|..+|.|+||.+|.|+.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999998876
No 34
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=78.70 E-value=0.93 Score=50.01 Aligned_cols=80 Identities=10% Similarity=0.071 Sum_probs=77.3
Q ss_pred ChhhhhhhcCCCeEeeehhHHHhhhhhccCCCCCCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHHHHhh
Q 007811 1 MAELLFETYGVPSVAFGVDAAFSYKYNQQYGICNKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYLKQLL 80 (589)
Q Consensus 1 m~EiLFE~f~vPsv~~~~qsvLSlya~g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L~~lL 80 (589)
|+|+|||+|+||+||++.+++||+||+| ++||||||||++.|||+||++|+++++++.|+++||++||+||.++|
T Consensus 217 ~~eilFE~f~~pa~~~~~~~vla~ya~G-----~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL 291 (593)
T 4fo0_A 217 LVNMILMKMGFSGIVVHQESVCATYGSG-----LSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLM 291 (593)
T ss_dssp HHHHHHHTTCCSEEEEEEHHHHHHHHHT-----CSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEeechHHHHHHHCC-----CCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHH
Confidence 6899999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hccCC
Q 007811 81 SLKHP 85 (589)
Q Consensus 81 ~~k~~ 85 (589)
..+++
T Consensus 292 ~~~~~ 296 (593)
T 4fo0_A 292 QRAGF 296 (593)
T ss_dssp HHTTC
T ss_pred HhcCC
Confidence 87654
No 35
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=69.55 E-value=2.1 Score=43.93 Aligned_cols=41 Identities=12% Similarity=-0.040 Sum_probs=34.7
Q ss_pred CCcceeeeCCCcceEEEeecCCccccccceecccccchhHHHH
Q 007811 34 NKDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYL 76 (589)
Q Consensus 34 ~~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L 76 (589)
..+++|||+|.++|.++-+-+|.+.. ...+++|+..+++.+
T Consensus 137 ~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIVNLTETF 177 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHHHHHHHh
Confidence 35699999999999999887887654 778999999988876
No 36
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=68.44 E-value=2.8 Score=42.56 Aligned_cols=72 Identities=11% Similarity=0.004 Sum_probs=50.9
Q ss_pred CCcchhHHHHhhcCCCCChhhhHhhcCCeEEecC-CCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 479 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGG-CCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 479 ~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG-~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
.||..+|.+.|..+ .|- -.+..=.++|+++|| .+..|++.++|...+... .++++.|+++.|..-+||++++
T Consensus 214 asl~~sV~~~I~~l-a~~-~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 214 AAVIGVVGEVVTTM-AIT-VAREFKTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp HHHHHHHHHHHHHH-HHH-HHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHH-HHH-HHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence 56777776666311 000 011222458999999 999999999999765432 3678889999999999999875
No 37
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=67.94 E-value=1.2 Score=45.16 Aligned_cols=47 Identities=9% Similarity=0.174 Sum_probs=33.1
Q ss_pred cCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 504 TSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 504 ~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
...||||||+|.+ + ...|...+|.. .-.+..+++|.++.=+|+.+++
T Consensus 273 ~~~vvl~GGga~l--l----~~~l~~~~~~~-~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--I----CDAVKKHTQIR-DERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--H----HHHHHHTSCCC-GGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--H----HHHHHHHhCCC-CCceeeCCCcHHHHHHHHHHhc
Confidence 4789999999987 4 44444455421 0135667899999999998875
No 38
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=65.38 E-value=2.5 Score=43.82 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=32.9
Q ss_pred CcceeeeCCCcceEEEeecC--Cccc--cccceecccccchhHHHH
Q 007811 35 KDGLAICPGFSTTHVIPFVE--GEPV--YRGSCRTNIGGYHITDYL 76 (589)
Q Consensus 35 ~tGLVVD~G~~~T~VvPV~e--G~~l--~~a~~rl~~GG~~lt~~L 76 (589)
.+++|||+|.++|.++-+.+ +.+. ......+++|+..+|+.+
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 46999999999999998766 4331 124788999999988775
No 39
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=65.36 E-value=3.7 Score=43.08 Aligned_cols=75 Identities=8% Similarity=-0.108 Sum_probs=53.0
Q ss_pred CCcchhHHHHhhcCCCCChhhhHhhcCCeEEecC-CCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 479 VGLDEMTGVSIRRLPTKDEDLEQRLTSSILMTGG-CCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 479 ~GL~e~I~~sI~~~~~c~~d~r~~L~~NIvLtGG-~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
.||+.+|.+.|..+ +-.-.++.=.++||++|| .+.-|++.+.|...|.--... .++++.++++.|..=+||++++
T Consensus 283 ~gll~sVa~~I~~l--A~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 283 RATLVTITNNIGSI--ARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 67888888776311 000113444568999999 999999999999988643222 2456668889999999998764
No 40
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=64.21 E-value=1.2 Score=45.73 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=34.2
Q ss_pred hhcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhcc
Q 007811 502 RLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 558 (589)
Q Consensus 502 ~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilas 558 (589)
.++..|+||||+|++ +.+.|..+ +| +.|..+++|.++.=+|.-.++.
T Consensus 277 ~~~~~IvltGGGA~l--~~~~l~~~----~~----~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 277 DQLDSLIFIGGTTQK--LKEQISKT----YP----NNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp TSCSEEEEESTTHHH--HHHHHHHH----ST----TCEECCSSGGGHHHHHHHHHHH
T ss_pred HHccEEEEECChHHH--HHHHHHHH----cC----CCCEecCCChhhHHHHHHHHHh
Confidence 346899999999998 44555444 33 2355688999999899877754
No 41
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=62.16 E-value=3.5 Score=42.15 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=33.9
Q ss_pred CcceeeeCCCcceEEEeecCCccccccceecccccchhHHHH
Q 007811 35 KDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYL 76 (589)
Q Consensus 35 ~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L 76 (589)
.+++|||+|.++|.++-+-+|.+.. ...+++|.--+++.+
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQRLIDRF 170 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHHHHHHS
T ss_pred CCEEEEEeCCCceEEEEEECCeEee--eEEEechhhHHHHHh
Confidence 5689999999999999998887665 778999998777654
No 42
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=61.81 E-value=1.5 Score=43.64 Aligned_cols=48 Identities=27% Similarity=0.409 Sum_probs=39.2
Q ss_pred cCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhccc
Q 007811 504 TSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATK 559 (589)
Q Consensus 504 ~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilasl 559 (589)
-..|+++||.+..|++.+.+...|.. .|+.++.+.+.+=+|++++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 36799999999999999999888732 3566777888788899999854
No 43
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=50.73 E-value=7.7 Score=42.36 Aligned_cols=39 Identities=18% Similarity=0.143 Sum_probs=33.2
Q ss_pred cceeeeCCCcceEEEeecCCccccccceecccccchhHHHH
Q 007811 36 DGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDYL 76 (589)
Q Consensus 36 tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~L 76 (589)
.++|||+|.|+|.++-+-+|.+.. ...+++|.-.+++.+
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSFAQLY 176 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHHHHHH
Confidence 699999999999999877776654 678999999888766
No 44
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=47.12 E-value=10 Score=39.41 Aligned_cols=37 Identities=16% Similarity=0.061 Sum_probs=28.5
Q ss_pred CcceeeeCCCcceEEEeecC--Cccccccceecccccch
Q 007811 35 KDGLAICPGFSTTHVIPFVE--GEPVYRGSCRTNIGGYH 71 (589)
Q Consensus 35 ~tGLVVD~G~~~T~VvPV~e--G~~l~~a~~rl~~GG~~ 71 (589)
.+++|||+|.++|.++-+.. +.+.......+++||..
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCcc
Confidence 47999999999999997644 34544446888999865
No 45
>2l2l_B Methyl-CPG-binding domain protein 2; DNA methylation, coiled-coil, NURD, MBD2, P66alpha, transfer; NMR {Homo sapiens}
Probab=45.79 E-value=37 Score=23.69 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHHHHHHH
Q 007811 143 PPSEEEIARKAAIKERQGQRLREMAE 168 (589)
Q Consensus 143 ~~t~eel~~~~~rr~~~~~RLqe~~~ 168 (589)
..|++++.+|.+|=+...+||++...
T Consensus 6 ~Vte~DIr~QE~rV~~aR~rL~eaL~ 31 (36)
T 2l2l_B 6 IVTDEDIRKQEERVQQVRKKLEEALM 31 (36)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999988753
No 46
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=45.08 E-value=9.9 Score=41.48 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=33.4
Q ss_pred CcceeeeCCCcceEEEeecCCccccccceecccccchhHHH
Q 007811 35 KDGLAICPGFSTTHVIPFVEGEPVYRGSCRTNIGGYHITDY 75 (589)
Q Consensus 35 ~tGLVVD~G~~~T~VvPV~eG~~l~~a~~rl~~GG~~lt~~ 75 (589)
..|+|||+|.|+|.++-+-+|.+.. ...+++|.--+++.
T Consensus 140 ~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 140 PDGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRLSEQ 178 (508)
T ss_dssp CEEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHHHHH
T ss_pred CCeEEEEeCCCceEEEEeeCCeeee--EEEecceEEehhhc
Confidence 4689999999999999998887654 77889999888864
No 47
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=42.00 E-value=4.9 Score=44.60 Aligned_cols=46 Identities=11% Similarity=0.148 Sum_probs=33.4
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeC-----CCCccceeechhh
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRA-----LDPVLDAWRGASV 555 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~-----~d~~~~aW~Ggsi 555 (589)
..||||||+|+++|+.+=....|..+ .|++-.| ..|.|++-.|-.+
T Consensus 552 ~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGLll 602 (607)
T 1nbw_A 552 AFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGLLL 602 (607)
T ss_dssp CEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHHHH
Confidence 55999999999999999998888651 2444433 3577777666543
No 48
>1k1f_A Breakpoint cluster region protein; oligomerization, coiled coil, BCR-ABL kinase, transferase; 2.20A {Homo sapiens} SCOP: a.147.1.1
Probab=40.40 E-value=1.2e+02 Score=24.01 Aligned_cols=37 Identities=24% Similarity=0.245 Sum_probs=31.7
Q ss_pred eeCCCCCCCCCCCCCHHHHHHHHHHHHHHhHHHHHHH
Q 007811 131 WQLPWVPPPTEEPPSEEEIARKAAIKERQGQRLREMA 167 (589)
Q Consensus 131 ~qlP~~~~~~~~~~t~eel~~~~~rr~~~~~RLqe~~ 167 (589)
.|||...||.-...+-++.+...+|=+.+-+||..--
T Consensus 13 aqfp~~epp~m~l~~vgdiEqeLe~Ck~sIrrLE~ev 49 (72)
T 1k1f_A 13 AQFPDSEPPRMELRSVGDIEQELERAKASIRRLEQEV 49 (72)
T ss_dssp HHCTTSCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCcHhHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3899999998889999999999999999999995433
No 49
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=36.75 E-value=5.3 Score=41.10 Aligned_cols=47 Identities=21% Similarity=0.261 Sum_probs=31.9
Q ss_pred hcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEE-EeCCCCccceeechhhhcc
Q 007811 503 LTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKV-VRALDPVLDAWRGASVYAT 558 (589)
Q Consensus 503 L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V-~~~~d~~~~aW~Ggsilas 558 (589)
....||||||+|.+ +.+.| ...+|. +.+ ....+|.+++=+|...++.
T Consensus 296 ~i~~IvL~GGga~l--l~~~l----~~~~~~---~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 296 RVTSLIPVGGGSNL--IGDRF----EEIAPG---TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GEEEEEEESTTHHH--HGGGG----GGGSTT---CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cccEEEEECCcHHH--HHHHH----HHHCcC---cEEeccCCCcHHHHHHHHHHHHh
Confidence 45889999999998 44444 444442 122 2367899999999887654
No 50
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=36.57 E-value=5.5 Score=44.13 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=33.2
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeC-----CCCccceeechhh
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRA-----LDPVLDAWRGASV 555 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~-----~d~~~~aW~Ggsi 555 (589)
..||||||+|+++|+.+=....|.. +.|++-.| ..|.|++-.|-.+
T Consensus 550 ~~VVLTGGsSql~GI~ElA~~iL~~-----y~VRiGrP~~~gv~gP~fAtAvGLll 600 (610)
T 2d0o_A 550 PFVVLVGGSSLDFEVPQLVTDALAH-----YRLVAGRGNIRGSEGPRNAVATGLIL 600 (610)
T ss_dssp CEEEEESGGGGCSSHHHHHHHHTTT-----SSCEEEECCGGGTSTTSCHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCc-----CCeEEecCCccccCCCcHHHHHHHHH
Confidence 5599999999999999988887753 23455443 3677877666544
No 51
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=33.95 E-value=2.4 Score=44.12 Aligned_cols=45 Identities=18% Similarity=0.100 Sum_probs=33.8
Q ss_pred hhcCCeEEecCCCCCCC--hHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhcc
Q 007811 502 RLTSSILMTGGCCLFPG--MSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 558 (589)
Q Consensus 502 ~L~~NIvLtGG~S~~~G--f~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilas 558 (589)
..+..|+||||+|.++| +.+.|..+ +|. . ++|.++.=.|..+++.
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~----~~~------~--~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDV----FEK------A--DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSC----EEC------C--SSGGGHHHHHHHHHHH
T ss_pred hhccEEEEECcchhcchhhHHHHHHHH----CCC------C--CCcHHHHHHHHHHHHH
Confidence 44688999999999888 66655543 232 1 8899999999988874
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=33.08 E-value=26 Score=34.85 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=40.0
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhcc
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYAT 558 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilas 558 (589)
..|||.||.+..+.|-++|+..|....+. .+.|..+.-...++-+||+.++-
T Consensus 239 ~~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 239 THIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp SEEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 35899999998899999999999865542 35676666666788889987763
No 53
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=31.23 E-value=40 Score=33.00 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=38.3
Q ss_pred hhhhhhhcCCCeEeeehhHHHhhhhh---ccCCCCCCcceeeeCCCcceEEEeecCCcccc
Q 007811 2 AELLFETYGVPSVAFGVDAAFSYKYN---QQYGICNKDGLAICPGFSTTHVIPFVEGEPVY 59 (589)
Q Consensus 2 ~EiLFE~f~vPsv~~~~qsvLSlya~---g~~~~~~~tGLVVD~G~~~T~VvPV~eG~~l~ 59 (589)
.+.| +.|++| |++.+++-+++++- +. ...++++|.+|.+.. .--|++|.++.
T Consensus 88 ~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~---~~~~~v~l~~GtGiG-~giv~~G~l~~ 142 (292)
T 2gup_A 88 YEAL-SSYQLP-VHLENDANCVGLSELLAHP---ELENAACVVIGTGIG-GAMIINGRLHR 142 (292)
T ss_dssp HHHT-GGGCCC-EEEEEHHHHHHHHHHHHCT---TCSSEEEEEESSSEE-EEEEETTEEEC
T ss_pred HHHH-HHcCCC-EEEechHHHHHHHHHHhcC---CCCeEEEEEECCceE-EEEEECCEEEe
Confidence 3567 899999 88999998888773 21 146899999998854 44566887765
No 54
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=31.21 E-value=14 Score=36.50 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=36.5
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCCC----CCeEEEeCCCCccceeechhhhc
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPCG----APIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~----~~v~V~~~~d~~~~aW~Ggsila 557 (589)
..|||.||.+..+-|.++|...+....+.. ..+.|..+.-...++-+||+.++
T Consensus 229 ~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~ 285 (292)
T 2gup_A 229 GVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNW 285 (292)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHH
T ss_pred CEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHH
Confidence 368999998777778888888887654321 23556555544556778998876
No 55
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=30.85 E-value=16 Score=35.93 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=37.8
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
..|||.||.+..+-|.++|...+....+. ..+.|..+.....++-+||+.++
T Consensus 235 ~~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 235 QCVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp SEEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 35888998887788999999988875322 24566666555567778998775
No 56
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=29.01 E-value=21 Score=37.20 Aligned_cols=73 Identities=16% Similarity=0.104 Sum_probs=46.5
Q ss_pred CCeEEecCCCCCCC-hHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhcccCC-C------CccceeHHHHhhhc
Q 007811 505 SSILMTGGCCLFPG-MSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYATKLQ-F------PQQTFSRMDYYEKG 576 (589)
Q Consensus 505 ~NIvLtGG~S~~~G-f~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsilasl~~-f------~~~wITk~EY~E~G 576 (589)
.-|||+||.+...- |.+++...+..+. ++.|........+.-+||+.++.... . ...| +.-|+-++
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 370 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRGEEKPKNYSEESRRW--RERYDSYL 370 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTTSSCCEEHHHHHHHH--HHHHHHHT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcCCcccccchhHhHHH--HHHHHhhh
Confidence 46999999887665 8899999887764 36676554444466788888774321 1 0125 55566666
Q ss_pred hHHHHHh
Q 007811 577 ENWLRRY 583 (589)
Q Consensus 577 ~~iv~~k 583 (589)
..|+..|
T Consensus 371 ~~~~~~~ 377 (381)
T 1saz_A 371 DGILRHH 377 (381)
T ss_dssp GGGCC--
T ss_pred hhhhhcc
Confidence 6665443
No 57
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=28.81 E-value=1.2e+03 Score=31.29 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=19.2
Q ss_pred ChhhhHhhcCCeEEecCCCCCCChHHHHHHHHHhhcCCCCCeEEEe-CCCCccceeechhhhcccCCCCccceeHHHHhh
Q 007811 496 DEDLEQRLTSSILMTGGCCLFPGMSERLEAGIRMIRPCGAPIKVVR-ALDPVLDAWRGASVYATKLQFPQQTFSRMDYYE 574 (589)
Q Consensus 496 ~~d~r~~L~~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~~~~v~V~~-~~d~~~~aW~Ggsilasl~~f~~~wITk~EY~E 574 (589)
|+-+-+.|-++++-.||...+. +.+ +++ ...| ++++-+.+ .++|.|.+=+-+ .-++-++.||++=-++
T Consensus 2242 DP~L~pvL~k~~~k~gg~~~I~-lGd---k~i-dy~~-~FrlyltTkl~np~y~Pev~~-----kvtlINFtvT~~GLed 2310 (3245)
T 3vkg_A 2242 DPVLNPVLNKEIRKKGGRILIR-LGD---QDV-DFSP-SFMIFLFTRDPTAHFTPDLCS-----RVTFVNFTVTPSSLQS 2310 (3245)
T ss_dssp --------------------------------------CCCEEEEECCTTCCCCHHHHH-----TSEEEECCCCHHHHHH
T ss_pred chhHHHHHHHHHHhcCceEEEE-ECC---eeE-ecCC-CceEEEEecCCCCCCCHHHHh-----heEEEEEEecHHHHHH
Confidence 4555666677777777754331 111 111 2222 33333332 357777663322 2244555788775554
Q ss_pred hc
Q 007811 575 KG 576 (589)
Q Consensus 575 ~G 576 (589)
.=
T Consensus 2311 QL 2312 (3245)
T 3vkg_A 2311 QC 2312 (3245)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 58
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=28.02 E-value=47 Score=35.70 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=41.5
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCC------CCCeEEEeCCCCccceeechhhhccc
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPC------GAPIKVVRALDPVLDAWRGASVYATK 559 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~------~~~v~V~~~~d~~~~aW~Ggsilasl 559 (589)
..|.+-||....|+|.++++.-|..+++. ..+|.+..+.| ++=+||+++|.+
T Consensus 385 ~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d---gsg~GAAl~aa~ 442 (457)
T 2yhx_A 385 GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID---GXGAASXVIXSI 442 (457)
T ss_dssp EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC---TTTHHHHHHHHH
T ss_pred EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC---chhhhHHHHHHH
Confidence 36888888999999999999999998754 44677777654 566799888864
No 59
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=27.68 E-value=31 Score=34.78 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=38.8
Q ss_pred CCeEEecCCCCCCChHHHHHHHHHhhcCC-CCCeEEEeCCCCccceeechhhhc
Q 007811 505 SSILMTGGCCLFPGMSERLEAGIRMIRPC-GAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 505 ~NIvLtGG~S~~~Gf~eRL~~EL~~l~p~-~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
..|||.||.+..+-|-++|...|...... ...+.|..+.-...++-+||+.++
T Consensus 271 ~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 271 HVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp SEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 35889999888888888888888876532 235677766655667778988775
No 60
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=24.52 E-value=36 Score=35.03 Aligned_cols=53 Identities=13% Similarity=0.017 Sum_probs=37.0
Q ss_pred CCeEEecCCCCC-CChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 505 SSILMTGGCCLF-PGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 505 ~NIvLtGG~S~~-~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
..|||.||.+.. +-|.++|...+....+....+.|..+.-...++-+||+.++
T Consensus 316 ~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 316 SKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 369 (380)
T ss_dssp CEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH
T ss_pred CEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 358888887754 67888888888876543344667666555556778988776
No 61
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=24.34 E-value=29 Score=34.63 Aligned_cols=53 Identities=21% Similarity=0.116 Sum_probs=37.1
Q ss_pred CCeEEecCCC-CC-CChHHHHHHHHHhhcCCCCCeEEEeCCCCccceeechhhhc
Q 007811 505 SSILMTGGCC-LF-PGMSERLEAGIRMIRPCGAPIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 505 ~NIvLtGG~S-~~-~Gf~eRL~~EL~~l~p~~~~v~V~~~~d~~~~aW~Ggsila 557 (589)
..|||.||.+ .. +-|-++|+..|....+......|..+.-...++-+||+.++
T Consensus 239 ~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 293 (302)
T 3vov_A 239 GVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTA 293 (302)
T ss_dssp SEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHH
T ss_pred CEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHH
Confidence 3578888877 55 55899999999887654333346656555567778998876
No 62
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=22.24 E-value=40 Score=21.88 Aligned_cols=18 Identities=33% Similarity=0.577 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007811 314 YVEQMRAKYKELSEKIDQ 331 (589)
Q Consensus 314 ~~~~~r~~~~~i~~~~~~ 331 (589)
+++++|++...|++|+++
T Consensus 2 ~~e~mr~Q~~~lveKvq~ 19 (26)
T 1oeg_A 2 LVEDMQRQWAGLVEKVQA 19 (26)
T ss_dssp HHHHTTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 578999999999999874
No 63
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=22.17 E-value=51 Score=32.96 Aligned_cols=62 Identities=19% Similarity=0.272 Sum_probs=41.0
Q ss_pred CCeEEecCCCCCCC-hHHHHHHHHHhhcC--C-CCCeEEEeCCCCccceeechhhhcccCCCCccc
Q 007811 505 SSILMTGGCCLFPG-MSERLEAGIRMIRP--C-GAPIKVVRALDPVLDAWRGASVYATKLQFPQQT 566 (589)
Q Consensus 505 ~NIvLtGG~S~~~G-f~eRL~~EL~~l~p--~-~~~v~V~~~~d~~~~aW~Ggsilasl~~f~~~w 566 (589)
.-|||.||.+..+. |.++|...++.... . ...+.|..+.-...+.-+||+.++--..|..-|
T Consensus 241 ~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 241 DAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp SEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred CEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 35888888887765 46788888876652 1 235777777666678889999887544454444
No 64
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=21.76 E-value=25 Score=35.02 Aligned_cols=54 Identities=19% Similarity=0.054 Sum_probs=37.3
Q ss_pred CCeEEecCCCC-CCChHHHHHHHHHhhcCCC--CCeEEEeCCCCccceeechhhhcc
Q 007811 505 SSILMTGGCCL-FPGMSERLEAGIRMIRPCG--APIKVVRALDPVLDAWRGASVYAT 558 (589)
Q Consensus 505 ~NIvLtGG~S~-~~Gf~eRL~~EL~~l~p~~--~~v~V~~~~d~~~~aW~Ggsilas 558 (589)
..|||.||.+. .+-|.++|...+....+.. ..+.|..+.....++-+||+.++-
T Consensus 264 ~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 264 DSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp SEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 35888888775 5778889988888765421 135666655555677789988763
No 65
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=20.76 E-value=30 Score=34.77 Aligned_cols=53 Identities=17% Similarity=0.069 Sum_probs=38.6
Q ss_pred CCeEEecCCCCC-CChHHHHHHHHHhhcCCC--CCeEEEeCCCCccceeechhhhc
Q 007811 505 SSILMTGGCCLF-PGMSERLEAGIRMIRPCG--APIKVVRALDPVLDAWRGASVYA 557 (589)
Q Consensus 505 ~NIvLtGG~S~~-~Gf~eRL~~EL~~l~p~~--~~v~V~~~~d~~~~aW~Ggsila 557 (589)
..|||.||.+.. +-|.++|...|....+.. ..+.|..+.-...++-+||+.++
T Consensus 262 ~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 262 NNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 458888888765 668888988888766421 24677777666677888998876
Done!