Query 007815
Match_columns 588
No_of_seqs 171 out of 984
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 15:42:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007815.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007815hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 5E-126 1E-130 1042.6 54.5 565 17-587 19-599 (612)
2 PLN02247 indole-3-acetic acid- 100.0 5E-123 1E-127 1021.4 53.7 571 10-587 1-596 (606)
3 PLN02249 indole-3-acetic acid- 100.0 2E-116 5E-121 976.9 54.2 559 18-587 19-588 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 3E-111 7E-116 934.2 41.1 513 22-571 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 1.9E-28 4E-33 260.8 26.5 391 31-564 21-433 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 1.9E-27 4.1E-32 260.4 25.7 388 31-542 12-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 4.8E-25 1E-29 239.3 26.2 380 31-541 6-409 (422)
8 TIGR02304 aden_form_hyp probab 99.9 4.5E-22 9.7E-27 215.8 27.0 316 32-493 23-377 (430)
9 PRK07529 AMP-binding domain pr 99.6 2.9E-13 6.4E-18 154.7 24.0 137 301-460 332-490 (632)
10 COG1021 EntE Peptide arylation 99.6 1.1E-14 2.4E-19 150.9 11.0 133 302-461 305-460 (542)
11 PRK00174 acetyl-CoA synthetase 99.5 2.6E-12 5.6E-17 146.9 30.0 229 301-578 366-633 (637)
12 PRK06334 long chain fatty acid 99.5 4.3E-13 9.4E-18 150.3 22.8 134 301-460 298-455 (539)
13 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 3.8E-12 8.3E-17 145.1 30.6 228 301-576 357-624 (625)
14 PRK09274 peptide synthase; Pro 99.5 2.6E-12 5.7E-17 143.8 26.9 142 301-460 287-465 (552)
15 PRK07788 acyl-CoA synthetase; 99.5 2.4E-12 5.3E-17 144.1 24.8 132 301-460 322-472 (549)
16 PLN02574 4-coumarate--CoA liga 99.5 6.3E-12 1.4E-16 141.4 27.7 134 301-460 318-475 (560)
17 PTZ00237 acetyl-CoA synthetase 99.5 3.4E-12 7.3E-17 146.5 25.8 231 301-576 379-643 (647)
18 COG0318 CaiC Acyl-CoA syntheta 99.5 4.6E-12 1E-16 142.2 25.4 131 303-460 292-446 (534)
19 TIGR02316 propion_prpE propion 99.5 2.9E-11 6.2E-16 138.2 31.5 133 301-460 353-517 (628)
20 PRK13295 cyclohexanecarboxylat 99.5 9E-12 1.9E-16 139.6 26.7 133 300-460 310-464 (547)
21 PRK04319 acetyl-CoA synthetase 99.5 9.1E-12 2E-16 140.3 26.7 132 301-460 322-477 (570)
22 PRK05677 long-chain-fatty-acid 99.5 2.2E-11 4.7E-16 137.1 29.3 132 301-460 325-478 (562)
23 TIGR01734 D-ala-DACP-lig D-ala 99.5 1.8E-11 3.8E-16 135.0 27.8 133 300-460 256-418 (502)
24 PRK07514 malonyl-CoA synthase; 99.5 1.7E-11 3.7E-16 135.3 27.5 135 299-460 266-422 (504)
25 PRK05605 long-chain-fatty-acid 99.5 1.2E-11 2.6E-16 139.2 26.8 134 301-460 335-490 (573)
26 PLN02654 acetate-CoA ligase 99.5 4.4E-11 9.6E-16 137.7 31.2 226 302-576 397-662 (666)
27 PRK06060 acyl-CoA synthetase; 99.5 1.4E-11 3.1E-16 142.6 26.9 133 301-460 259-410 (705)
28 PRK06155 crotonobetaine/carnit 99.5 2.4E-11 5.1E-16 136.3 27.4 131 302-460 294-445 (542)
29 PRK08314 long-chain-fatty-acid 99.4 3.6E-11 7.9E-16 134.2 28.0 133 301-460 304-461 (546)
30 TIGR03205 pimA dicarboxylate-- 99.4 2.1E-11 4.6E-16 136.3 26.0 191 302-536 312-525 (541)
31 PRK06164 acyl-CoA synthetase; 99.4 4.1E-11 9E-16 133.7 27.8 111 328-460 319-451 (540)
32 PRK10524 prpE propionyl-CoA sy 99.4 9.5E-11 2.1E-15 133.7 31.0 132 302-460 355-518 (629)
33 PRK03584 acetoacetyl-CoA synth 99.4 8.2E-11 1.8E-15 135.0 30.4 227 302-576 383-648 (655)
34 PRK07638 acyl-CoA synthetase; 99.4 2.3E-11 5E-16 134.0 24.5 128 309-460 258-406 (487)
35 PRK06145 acyl-CoA synthetase; 99.4 4.1E-11 8.9E-16 132.1 26.1 133 301-460 263-418 (497)
36 PRK09088 acyl-CoA synthetase; 99.4 3.2E-11 6.9E-16 132.8 25.1 132 301-459 251-405 (488)
37 PRK08633 2-acyl-glycerophospho 99.4 2.6E-11 5.7E-16 147.0 26.3 134 300-460 896-1064(1146)
38 PLN03051 acyl-activating enzym 99.4 4.4E-11 9.6E-16 132.7 25.9 131 302-459 236-401 (499)
39 PRK13382 acyl-CoA synthetase; 99.4 2.9E-11 6.2E-16 135.4 24.4 132 301-460 311-461 (537)
40 PRK12583 acyl-CoA synthetase; 99.4 4E-11 8.7E-16 134.1 25.0 159 301-494 316-500 (558)
41 PRK08316 acyl-CoA synthetase; 99.4 8.7E-11 1.9E-15 130.0 27.3 132 302-460 286-440 (523)
42 PRK04813 D-alanine--poly(phosp 99.4 8.7E-11 1.9E-15 129.3 26.8 132 301-460 259-420 (503)
43 PRK05852 acyl-CoA synthetase; 99.4 3.1E-11 6.7E-16 134.8 23.4 135 300-460 293-453 (534)
44 PLN02246 4-coumarate--CoA liga 99.4 7.7E-11 1.7E-15 131.7 26.3 133 302-460 298-457 (537)
45 PLN02736 long-chain acyl-CoA s 99.4 1.2E-11 2.6E-16 141.9 20.3 135 302-460 376-533 (651)
46 PRK05851 long-chain-fatty-acid 99.4 8.5E-11 1.8E-15 131.2 26.4 63 393-460 366-440 (525)
47 PRK07656 long-chain-fatty-acid 99.4 7.5E-11 1.6E-15 130.1 25.5 131 301-459 280-436 (513)
48 PRK06187 long-chain-fatty-acid 99.4 4E-11 8.7E-16 132.3 23.3 190 300-536 279-498 (521)
49 PLN02614 long-chain acyl-CoA s 99.4 7.6E-12 1.6E-16 144.1 18.0 134 302-459 386-541 (666)
50 PLN02860 o-succinylbenzoate-Co 99.4 1.4E-11 3E-16 138.8 19.5 148 300-460 286-459 (563)
51 PRK07769 long-chain-fatty-acid 99.4 9.8E-11 2.1E-15 133.7 26.5 65 393-462 412-510 (631)
52 PRK07786 long-chain-fatty-acid 99.4 1.1E-10 2.4E-15 130.6 26.5 131 303-460 291-444 (542)
53 COG0365 Acs Acyl-coenzyme A sy 99.4 7.4E-11 1.6E-15 130.9 24.2 133 299-460 287-441 (528)
54 TIGR03208 cyc_hxne_CoA_lg cycl 99.4 1.4E-10 3E-15 129.7 26.1 132 301-460 309-462 (538)
55 PRK10946 entE enterobactin syn 99.4 3.8E-11 8.3E-16 134.3 21.1 133 301-460 299-454 (536)
56 PRK07867 acyl-CoA synthetase; 99.4 2.7E-10 5.8E-15 127.5 27.9 130 302-460 267-426 (529)
57 COG1022 FAA1 Long-chain acyl-C 99.4 6.6E-12 1.4E-16 141.1 14.9 286 98-479 190-506 (613)
58 TIGR03098 ligase_PEP_1 acyl-Co 99.4 2.6E-10 5.7E-15 126.0 27.4 133 301-460 273-439 (515)
59 PRK12492 long-chain-fatty-acid 99.4 2.7E-10 5.8E-15 128.2 27.8 130 302-459 333-485 (562)
60 PRK08315 AMP-binding domain pr 99.4 2.4E-10 5.3E-15 128.0 27.0 134 301-460 314-472 (559)
61 PRK07470 acyl-CoA synthetase; 99.3 1.1E-10 2.4E-15 129.9 23.9 133 300-460 278-439 (528)
62 PRK08974 long-chain-fatty-acid 99.3 2.3E-10 5E-15 128.5 26.6 131 302-460 325-477 (560)
63 PRK13383 acyl-CoA synthetase; 99.3 1.4E-10 3.1E-15 128.8 24.7 132 301-460 291-441 (516)
64 PRK07059 Long-chain-fatty-acid 99.3 3E-10 6.6E-15 127.5 27.1 131 302-460 327-480 (557)
65 KOG1176 Acyl-CoA synthetase [L 99.3 9E-11 1.9E-15 130.7 22.1 134 300-460 297-453 (537)
66 TIGR02275 DHB_AMP_lig 2,3-dihy 99.3 2.6E-10 5.5E-15 127.2 25.9 132 302-460 299-453 (527)
67 PRK10252 entF enterobactin syn 99.3 1.2E-10 2.5E-15 143.4 25.2 131 302-460 717-882 (1296)
68 PLN02387 long-chain-fatty-acid 99.3 5.6E-11 1.2E-15 137.6 21.1 134 302-459 420-580 (696)
69 PLN02861 long-chain-fatty-acid 99.3 4.1E-11 8.9E-16 137.9 19.7 133 303-459 384-538 (660)
70 PRK07768 long-chain-fatty-acid 99.3 3.3E-10 7.1E-15 126.7 26.1 129 393-541 380-527 (545)
71 TIGR01217 ac_ac_CoA_syn acetoa 99.3 2.7E-10 6E-15 130.9 25.9 222 302-576 384-646 (652)
72 PLN02330 4-coumarate--CoA liga 99.3 2.9E-10 6.3E-15 127.4 25.5 129 309-460 307-462 (546)
73 PRK08751 putative long-chain f 99.3 9.9E-11 2.1E-15 131.4 21.7 132 301-460 328-482 (560)
74 PRK08043 bifunctional acyl-[ac 99.3 2.5E-10 5.3E-15 132.6 25.5 127 302-460 479-636 (718)
75 TIGR01733 AA-adenyl-dom amino 99.3 8.7E-11 1.9E-15 125.6 20.1 133 301-460 233-400 (408)
76 PRK06839 acyl-CoA synthetase; 99.3 4.1E-10 8.9E-15 123.9 25.5 131 301-460 263-416 (496)
77 TIGR03443 alpha_am_amid L-amin 99.3 3.3E-11 7.3E-16 149.3 18.8 136 300-460 527-723 (1389)
78 PRK12467 peptide synthase; Pro 99.3 2.7E-11 6E-16 162.3 18.9 133 301-460 3350-3516(3956)
79 PRK07787 acyl-CoA synthetase; 99.3 4.5E-10 9.8E-15 123.4 25.4 132 301-459 240-395 (471)
80 PRK13388 acyl-CoA synthetase; 99.3 5.6E-10 1.2E-14 125.2 26.5 129 316-460 277-425 (540)
81 PRK12406 long-chain-fatty-acid 99.3 1.2E-09 2.6E-14 121.1 28.0 130 302-459 271-423 (509)
82 TIGR02262 benz_CoA_lig benzoat 99.3 8.7E-10 1.9E-14 122.2 26.7 131 302-460 278-429 (508)
83 PRK12316 peptide synthase; Pro 99.3 1.4E-10 3E-15 158.4 23.9 133 301-460 2260-2426(5163)
84 PRK05857 acyl-CoA synthetase; 99.3 4.4E-10 9.5E-15 125.9 24.0 136 301-459 285-446 (540)
85 PRK03640 O-succinylbenzoic aci 99.3 1.3E-09 2.8E-14 119.7 27.1 129 302-460 254-405 (483)
86 PRK12467 peptide synthase; Pro 99.3 1.9E-10 4E-15 154.5 24.1 132 302-460 771-935 (3956)
87 PRK08279 long-chain-acyl-CoA s 99.3 1.1E-09 2.3E-14 124.4 26.8 143 301-459 313-483 (600)
88 PRK06188 acyl-CoA synthetase; 99.3 6E-10 1.3E-14 123.9 24.2 131 301-459 280-437 (524)
89 PRK06710 long-chain-fatty-acid 99.3 3.1E-10 6.7E-15 127.6 21.9 132 302-460 323-476 (563)
90 PRK12316 peptide synthase; Pro 99.3 1.5E-10 3.2E-15 158.1 22.6 133 301-460 769-931 (5163)
91 PRK08180 feruloyl-CoA synthase 99.3 4.3E-10 9.4E-15 128.2 23.1 130 300-459 332-491 (614)
92 PTZ00342 acyl-CoA synthetase; 99.3 2.2E-10 4.8E-15 133.3 21.0 132 302-459 461-615 (746)
93 KOG1177 Long chain fatty acid 99.3 4.9E-11 1.1E-15 126.7 13.1 63 393-459 426-505 (596)
94 PRK08276 long-chain-fatty-acid 99.2 1.6E-09 3.6E-14 119.6 25.7 131 301-460 261-414 (502)
95 PLN02430 long-chain-fatty-acid 99.2 3.5E-10 7.5E-15 130.3 21.0 134 302-459 383-538 (660)
96 PRK09192 acyl-CoA synthetase; 99.2 1.7E-09 3.8E-14 122.2 26.1 63 393-460 405-483 (579)
97 PRK06087 short chain acyl-CoA 99.2 1.1E-09 2.3E-14 122.7 24.1 129 302-459 302-454 (547)
98 PRK08308 acyl-CoA synthetase; 99.2 2.7E-09 5.8E-14 115.4 26.3 59 396-460 278-336 (414)
99 PRK05691 peptide synthase; Val 99.2 4.3E-10 9.3E-15 152.2 24.4 133 301-460 1387-1550(4334)
100 PLN03102 acyl-activating enzym 99.2 1.3E-09 2.8E-14 123.4 24.4 60 397-460 390-465 (579)
101 PRK07824 O-succinylbenzoic aci 99.2 3.3E-09 7.2E-14 112.3 25.7 44 412-460 235-278 (358)
102 PRK08008 caiC putative crotono 99.2 3.2E-09 6.8E-14 117.8 26.5 130 302-459 288-442 (517)
103 PRK05850 acyl-CoA synthetase; 99.2 1.7E-09 3.7E-14 122.0 24.4 63 393-460 391-481 (578)
104 PLN03052 acetate--CoA ligase; 99.2 1.4E-09 3.1E-14 126.5 24.4 132 301-459 470-633 (728)
105 PRK06814 acylglycerophosphoeth 99.2 2.2E-09 4.8E-14 130.7 26.0 127 302-460 907-1055(1140)
106 TIGR01923 menE O-succinylbenzo 99.2 3.2E-09 7E-14 114.8 24.4 58 398-459 291-364 (436)
107 KOG1256 Long-chain acyl-CoA sy 99.2 9E-11 2E-15 131.1 11.8 134 299-459 416-572 (691)
108 PTZ00216 acyl-CoA synthetase; 99.2 3.4E-10 7.3E-15 131.2 16.4 132 302-460 428-582 (700)
109 PF00501 AMP-binding: AMP-bind 99.2 7.8E-10 1.7E-14 118.9 18.2 119 300-444 275-417 (417)
110 PRK12582 acyl-CoA synthetase; 99.2 6.5E-10 1.4E-14 127.0 18.1 129 300-458 344-502 (624)
111 PRK07445 O-succinylbenzoic aci 99.2 2.2E-09 4.7E-14 118.0 21.5 61 396-460 298-369 (452)
112 PRK07008 long-chain-fatty-acid 99.2 3.7E-09 7.9E-14 118.4 23.6 132 301-460 292-454 (539)
113 PRK05691 peptide synthase; Val 99.1 1.2E-09 2.5E-14 148.1 21.4 133 301-460 3982-4147(4334)
114 PRK05620 long-chain-fatty-acid 99.1 6.9E-09 1.5E-13 117.1 24.1 131 303-460 299-475 (576)
115 PRK06178 acyl-CoA synthetase; 99.1 2E-08 4.4E-13 113.0 27.0 121 316-459 341-486 (567)
116 PRK06018 putative acyl-CoA syn 99.1 2.1E-08 4.6E-13 112.3 25.8 132 301-459 293-454 (542)
117 PRK12476 putative fatty-acid-- 99.0 6.8E-09 1.5E-13 118.3 16.3 131 393-541 423-588 (612)
118 PRK09029 O-succinylbenzoic aci 99.0 7E-08 1.5E-12 105.6 23.7 44 412-460 333-376 (458)
119 PRK08162 acyl-CoA synthetase; 99.0 5.2E-08 1.1E-12 109.0 22.6 59 398-460 387-461 (545)
120 PRK13391 acyl-CoA synthetase; 98.9 6E-08 1.3E-12 107.6 18.6 130 302-460 275-427 (511)
121 PLN02479 acetate-CoA ligase 98.9 5.1E-08 1.1E-12 110.0 17.6 59 398-460 401-475 (567)
122 PRK07868 acyl-CoA synthetase; 98.9 5.1E-08 1.1E-12 117.4 18.5 146 301-460 719-881 (994)
123 TIGR02372 4_coum_CoA_lig 4-cou 98.9 3.1E-07 6.8E-12 99.2 22.3 45 412-460 276-320 (386)
124 PRK07798 acyl-CoA synthetase; 98.8 2E-07 4.3E-12 103.4 18.8 133 302-460 296-453 (533)
125 PRK13390 acyl-CoA synthetase; 98.8 1.9E-07 4E-12 103.4 18.4 129 302-459 270-423 (501)
126 KOG1175 Acyl-CoA synthetase [L 98.8 3.1E-07 6.8E-12 103.1 18.9 252 276-577 338-623 (626)
127 KOG1180 Acyl-CoA synthetase [L 98.6 1.4E-06 2.9E-11 94.8 18.2 161 276-481 389-574 (678)
128 PF04443 LuxE: Acyl-protein sy 98.4 1.6E-05 3.5E-10 85.1 17.8 82 34-127 30-116 (365)
129 KOG1179 Very long-chain acyl-C 98.2 6.7E-05 1.5E-09 82.2 17.0 223 316-563 369-623 (649)
130 COG1020 EntF Non-ribosomal pep 97.4 0.006 1.3E-07 69.9 18.3 63 393-459 561-640 (642)
131 PTZ00297 pantothenate kinase; 96.8 0.022 4.7E-07 71.1 15.7 56 399-459 825-881 (1452)
132 PF14535 AMP-binding_C_2: AMP- 96.0 0.0066 1.4E-07 52.5 3.7 82 445-542 1-84 (96)
133 PRK09188 serine/threonine prot 95.7 0.095 2.1E-06 56.4 11.9 40 412-460 210-252 (365)
134 KOG1178 Non-ribosomal peptide 73.4 6.5 0.00014 47.7 6.4 45 412-460 455-499 (1032)
135 cd04931 ACT_PAH ACT domain of 58.5 56 0.0012 27.9 7.6 58 450-513 25-82 (90)
136 PRK12476 putative fatty-acid-- 55.5 11 0.00025 42.9 3.8 27 99-126 193-219 (612)
137 KOG3628 Predicted AMP-binding 52.1 89 0.0019 38.3 10.1 127 393-542 1174-1334(1363)
138 cd04880 ACT_AAAH-PDT-like ACT 46.2 1.3E+02 0.0029 23.9 7.8 56 451-511 11-66 (75)
139 KOG1179 Very long-chain acyl-C 43.4 13 0.00029 41.9 1.8 31 395-425 484-520 (649)
140 PF01797 Y1_Tnp: Transposase I 42.1 1.2E+02 0.0026 26.4 7.5 100 433-545 8-116 (121)
141 PRK07798 acyl-CoA synthetase; 40.4 13 0.00029 40.9 1.2 23 103-126 167-189 (533)
142 PF11454 DUF3016: Protein of u 38.6 76 0.0016 29.6 5.7 56 394-451 47-112 (141)
143 cd04905 ACT_CM-PDT C-terminal 37.8 2.2E+02 0.0047 23.0 7.9 55 452-511 14-68 (80)
144 cd04904 ACT_AAAH ACT domain of 35.3 2E+02 0.0043 23.2 7.1 54 450-510 11-64 (74)
145 PF09926 DUF2158: Uncharacteri 33.5 38 0.00082 26.1 2.4 19 413-434 1-19 (53)
146 COG5475 Uncharacterized small 33.1 47 0.001 25.8 2.7 24 413-439 5-28 (60)
147 PRK11899 prephenate dehydratas 33.0 3.4E+02 0.0073 28.2 10.1 57 450-511 205-261 (279)
148 PRK11898 prephenate dehydratas 30.3 3.5E+02 0.0075 28.1 9.7 57 450-511 208-264 (283)
149 COG0077 PheA Prephenate dehydr 30.3 3.4E+02 0.0074 28.2 9.4 56 450-510 205-260 (279)
150 COG2139 RPL21A Ribosomal prote 28.2 42 0.00092 29.0 2.0 34 412-445 32-68 (98)
151 PRK04306 50S ribosomal protein 27.4 44 0.00095 29.1 2.0 34 412-445 34-70 (98)
152 PRK13390 acyl-CoA synthetase; 25.4 34 0.00074 37.6 1.3 19 102-121 151-169 (501)
153 PTZ00189 60S ribosomal protein 24.8 59 0.0013 30.8 2.5 34 412-445 33-69 (160)
154 cd04866 LigD_Pol_like_3 LigD_P 24.0 45 0.00097 33.5 1.7 46 98-144 124-171 (223)
155 PF12401 DUF3662: Protein of u 22.9 92 0.002 27.9 3.3 85 444-539 20-106 (116)
156 cd04861 LigD_Pol_like LigD_Pol 22.8 49 0.0011 33.3 1.7 45 99-144 130-175 (227)
157 PRK09444 pntB pyridine nucleot 22.7 2.3E+02 0.0049 31.6 6.8 57 434-491 303-359 (462)
158 PRK10622 pheA bifunctional cho 22.6 5.5E+02 0.012 27.9 9.9 58 449-511 307-364 (386)
159 TIGR02778 ligD_pol DNA polymer 21.4 55 0.0012 33.3 1.8 46 98-144 145-191 (245)
160 PRK13391 acyl-CoA synthetase; 20.5 84 0.0018 34.7 3.2 19 102-121 157-175 (511)
161 COG1282 PntB NAD/NADP transhyd 20.4 1.4E+02 0.003 32.3 4.4 57 434-491 305-361 (463)
162 PF12101 DUF3577: Protein of u 20.3 77 0.0017 29.3 2.3 43 410-452 81-130 (137)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=5.2e-126 Score=1042.60 Aligned_cols=565 Identities=40% Similarity=0.736 Sum_probs=530.3
Q ss_pred cChHHHHHHHHHHHhcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCc
Q 007815 17 VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPIL 96 (588)
Q Consensus 17 ~~~~~~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~t~edf~~~vPi~~Yed~~p~ieR~~~Ge~~~ll 96 (588)
.++++.++.++..++||.++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+||++|+.++||
T Consensus 19 ~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~s~vL 98 (612)
T PLN02620 19 EKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIANGDTSPIL 98 (612)
T ss_pred cchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCCcc
Confidence 34467789999999999999999999999999999999999999999999999999999999999999999999977999
Q ss_pred cCCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeEecccccc
Q 007815 97 TGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNV 175 (588)
Q Consensus 97 ~~~pi~~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~ 175 (588)
|++||.+|++|||||+|++|+||+|+++++.++.++.+|..++++.+| +..||.+++++.+.+.+|++|||+|++|+.+
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~st~~ 178 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSY 178 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccccchh
Confidence 999999999999999879999999999998888888999999999888 8999999999999999999999999999999
Q ss_pred ccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 007815 176 YRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGV 255 (588)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI~~g~ 255 (588)
+++.+|+..+......|++|.+++.++|..+.+||||||+|.++++|..++++|+++|+.++++|+++|++||+||++|+
T Consensus 179 y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI~~G~ 258 (612)
T PLN02620 179 YKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGT 258 (612)
T ss_pred hhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999987777666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCcHHHHHHHHHHhCCCCeeccc
Q 007815 256 LSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSAD 335 (588)
Q Consensus 256 ~~~~~~~~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~~~~~~~l~~~~g~~~v~~~~ 335 (588)
++.+++++++|+++.+.|+|||++|++|+++|++. +|+|++++|||||++|+||++|+|++|.+.|+.|+||+|+++.+
T Consensus 259 ls~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~-~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~ 337 (612)
T PLN02620 259 IDSQITDPSVREAVMKILKPDPKLADFVEAECRKE-SWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTM 337 (612)
T ss_pred CCccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccc-cccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCcccccc
Confidence 99999999999999999999999999999999985 99999999999999999999999999999999999999999999
Q ss_pred cccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCccccc----------ccCCCccccccccCCCCeEEEEEc
Q 007815 336 YGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQV----------LCIEPKPVGLTEVKVGEEYEIIVT 405 (588)
Q Consensus 336 YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~----------~~~~~~~l~~~eve~G~~yELVvT 405 (588)
|+||||.+|+|++|.|+++...|.+.|+.+||||||.+ +++... ..+++++|+++||+.|+.||||||
T Consensus 338 Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvT 415 (612)
T PLN02620 338 YASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVH--RNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVT 415 (612)
T ss_pred ccccceEEEeccCCCCCcccceeeecCCcEEEEEeecc--CcccccccccccccccccccCccccHHHccCCCeEEEEEE
Confidence 99999999999999988777899999999999999976 321100 013467899999999999999999
Q ss_pred cccceeecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCc
Q 007815 406 NVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPG 485 (588)
Q Consensus 406 t~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~ 485 (588)
|++||||||+||||+|+||||++|+|+|++|.+.++++.|||++|.+|..||.++...|...++.|+||++.+|.+..||
T Consensus 416 t~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~Pg 495 (612)
T PLN02620 416 TYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPG 495 (612)
T ss_pred ecCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999877556899999999999888999
Q ss_pred eEEEEEEec--cC--CCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCC
Q 007815 486 HYVIFWEVS--GE--VNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTP 560 (588)
Q Consensus 486 ~y~~~vE~~--~~--~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g-~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~P 560 (588)
||++|||+. ++ ++...+++||..||++| |.+|+.+|..+ .|+|++|++|++|||+.++++++++|++.+|||+|
T Consensus 496 hYvl~~El~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~P 574 (612)
T PLN02620 496 HYVLFWELCLNGSTPIPPSVFEDCCLTIEESL-NSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTP 574 (612)
T ss_pred ceEEEEEEecCCCCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccCc
Confidence 999999983 22 35678999999999998 99999999987 59999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHhcccceeecccCC
Q 007815 561 RCVGPTNKTVLQILCNNIGKSYFSTAY 587 (588)
Q Consensus 561 r~~~~~~~~~~~~l~~~~~~~~~~~~~ 587 (588)
||++ +++++++|+++|+++|+|+++
T Consensus 575 r~v~--~~~~~~~l~~~v~~~~~s~~~ 599 (612)
T PLN02620 575 RCVK--FAPIIELLNSRVVSNYFSPKC 599 (612)
T ss_pred eEec--CHHHHHHHHhhhheeeccccC
Confidence 9999 999999999999999999986
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=5e-123 Score=1021.44 Aligned_cols=571 Identities=40% Similarity=0.709 Sum_probs=527.4
Q ss_pred ccccccccChHHHHHHHHHHHhcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCChhhhhhcCCCcccccchHHHHHHhc
Q 007815 10 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIID 89 (588)
Q Consensus 10 ~~~~~~~~~~~~~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~t~edf~~~vPi~~Yed~~p~ieR~~~ 89 (588)
|++.-++.+.+..++.++..++||.++|+++|++||+.|++|+|||+|+| +|.++++||++|||++|||++|||+||++
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~ 79 (606)
T PLN02247 1 MLPSYDPNDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIAN 79 (606)
T ss_pred CCCccCCcchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHc
Confidence 34455566667889999999999999999999999999999999999866 89999999999999999999999999999
Q ss_pred CCCCCCccCCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeE
Q 007815 90 GDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNA 168 (588)
Q Consensus 90 Ge~~~ll~~~pi~~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~t~~Gi~~ 168 (588)
|+.+++++++||.+|++|||||+|++|+||+|+++++....++.+|..++++..| +..||.+++++.+++.+|++|+|+
T Consensus 80 Ge~~~llt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~ 159 (606)
T PLN02247 80 GESSSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMA 159 (606)
T ss_pred CCCCceeCCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCccc
Confidence 9966667799999999999999779999999999998877778899999999877 889999999999999999999999
Q ss_pred eccccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHH
Q 007815 169 GTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELC 248 (588)
Q Consensus 169 g~~S~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv 248 (588)
|++++.++++.+|+..+......|++|.+++.++|..++|||||||+|.+++++..++++|+++++.++++|+++|++||
T Consensus 160 g~~~t~y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~ 239 (606)
T PLN02247 160 RPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELC 239 (606)
T ss_pred ccccchhhccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHH
Confidence 99999999998887776654568999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHhcccCCCCCchHHHHHhhccC-CCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCcHHHHHHHHHHhC
Q 007815 249 DDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAG 327 (588)
Q Consensus 249 ~dI~~g~~~~~~~~~~ir~~l~~~l-~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~~~~~~~l~~~~g 327 (588)
+||++|+++.++++|++|+++...+ +|+|++|++|+++|.+. ||.|++++|||||++|+||++|+|++|.+.|+.|+|
T Consensus 240 ~DI~~G~ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~-~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~g 318 (606)
T PLN02247 240 SNIRTGCVSDWITDPSCRNAVSSILSKPNSELADLIESECSGK-SWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSG 318 (606)
T ss_pred HHHhcCCcccccCCHHHHHHHhhcccCCCHHHHHHHHHHhccc-CccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcC
Confidence 9999999999999999999999999 69999999999999885 999999999999999999999999999999999999
Q ss_pred CCCeeccccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccc----------cc-----cCCCcccccc
Q 007815 328 DLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ----------VL-----CIEPKPVGLT 392 (588)
Q Consensus 328 ~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~----------~~-----~~~~~~l~~~ 392 (588)
|+|+++.+|+||||.+|+|++|.|+++...|.++|+.+||||||.+ +.+.+ .. .+.+.+|+++
T Consensus 319 glpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 396 (606)
T PLN02247 319 GLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVD--KNNGEVIHFVQCNGTDDDDDALKEDLEIVDLV 396 (606)
T ss_pred CCceecccccccceEEEeccCcCCCccCCceeecCCcEEEEEeecC--CCcccccccccccccccccccccccCceecHH
Confidence 9999999999999999999999987777889999999999999986 32110 00 1245699999
Q ss_pred ccCCCCeEEEEEccccceeecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeE
Q 007815 393 EVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVV 472 (588)
Q Consensus 393 eve~G~~yELVvTt~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~ 472 (588)
||+.|+.|||||||++||||||+||||+|+||||++|+|+|++|.+.++++.|||++|.++..||.++...+...++.+.
T Consensus 397 evk~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~ 476 (606)
T PLN02247 397 DVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLT 476 (606)
T ss_pred HccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876655688999
Q ss_pred eeEEeecCCCCCceEEEEEEecc-------CCCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccchHHHHH
Q 007815 473 DFTSHVDLSTDPGHYVIFWEVSG-------EVNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQIL 544 (588)
Q Consensus 473 ~f~~~~~~~~~~~~y~~~vE~~~-------~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g-~l~p~~v~~v~~gtf~~~~ 544 (588)
||+..+|.++.||||++|||+.. +.+...+++||..||++| |++|+.+|..+ +|+|++|++|++|||++++
T Consensus 477 d~ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~L-n~~Yr~~R~~~~~igPLeirvv~~GtF~~l~ 555 (606)
T PLN02247 477 EYTSYADTSSIPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESL-DSVYRRCRKRDKSIGPLEIRVVKHGTFDALM 555 (606)
T ss_pred eeecccccCCCCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHh-hHHHHHHhhccCcCCCcEEEEeCCChHHHHH
Confidence 99999998889999999999952 124568899999999998 99999999995 9999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCcccCCCCHHHHHHHhcccceeecccCC
Q 007815 545 DHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTAY 587 (588)
Q Consensus 545 ~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~~~~~~~~~~~ 587 (588)
++++++|++.+|||+|||++ +++++++|+++|+++|+|+++
T Consensus 556 ~~~~~~G~s~~Q~K~Pr~v~--~~~~~~~l~~~v~~~~~s~~~ 596 (606)
T PLN02247 556 DFCVSQGSSVNQYKTPRCIK--SEEALKILDSRVIGRFFSKRV 596 (606)
T ss_pred HHHHHcCCCcccccCceEec--CHHHHHHHHhhhheeeccccC
Confidence 99999999999999999999 999999999999999999986
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=2.4e-116 Score=976.89 Aligned_cols=559 Identities=41% Similarity=0.732 Sum_probs=511.5
Q ss_pred ChHHHHHHHHHHHhcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCcc
Q 007815 18 DVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILT 97 (588)
Q Consensus 18 ~~~~~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~t~edf~~~vPi~~Yed~~p~ieR~~~Ge~~~ll~ 97 (588)
+.+..++.++..++||.++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+||++||.+++||
T Consensus 19 ~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~~~vL~ 98 (597)
T PLN02249 19 KDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDRSPILS 98 (597)
T ss_pred cHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCceeC
Confidence 33677899999999999999999999999999999999999999999999999999999999999999999998677999
Q ss_pred CCCcceeeccccCCCCCcccccCChHHHH--HHHHHHHHHHHHHhccCC-CCCCceEEEeecccccccCCCCeEeccccc
Q 007815 98 GKPITTISRSSGTTQGKPKFLPFNDELME--TTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTN 174 (588)
Q Consensus 98 ~~pi~~f~~TSGTT~G~~K~iP~t~~~~~--~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~ 174 (588)
++||.+|++|||||+|++|+||+|+++++ .+..++.+|. .+..+| +..||.|++++.+.+.+|++|+|+|++++.
T Consensus 99 ~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~~--~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~~~~~~ 176 (597)
T PLN02249 99 SHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPV--MNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTS 176 (597)
T ss_pred CCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHHH--HhccCCccccCcEEEEEeccccccCCCCCccCccccc
Confidence 99999999999999999999999999997 3444465653 333356 888999998888889999999999999988
Q ss_pred cccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 007815 175 VYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREG 254 (588)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI~~g 254 (588)
++++..|+..+. ...|++|.+++.+.|..+++||||||||..++++..|++.||+.++.++++++++|+++|+||++|
T Consensus 177 ~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI~~g 254 (597)
T PLN02249 177 YYKSDHFRTSDY--DNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTG 254 (597)
T ss_pred cccccccccccc--cccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 777766654432 568999999999999999999999999999899999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHHhhccC-CCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCcHHHHHHHHHHhCCCCeec
Q 007815 255 VLSSRITVPSIRAAMSKIL-KPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMS 333 (588)
Q Consensus 255 ~~~~~~~~~~ir~~l~~~l-~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~~~~~~~l~~~~g~~~v~~ 333 (588)
+++.++++|++|+.|...+ .|+|++|++++++|++. +|+|++++|||||++|+||++||+.+|++.+++++|++++++
T Consensus 255 ~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~-~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~~~~ 333 (597)
T PLN02249 255 TLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQE-NWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMAS 333 (597)
T ss_pred CCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccc-cccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCcccc
Confidence 9999999999999998888 79999999999999874 799999999999999999999999999999999999999999
Q ss_pred cccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccccceeec
Q 007815 334 ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRY 413 (588)
Q Consensus 334 ~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~~Gl~RY 413 (588)
.+|+||||++|+|.++.|+++..+|+++++++||||||.+ ++++ ...+++.+++++||+.|+.|||||||++|||||
T Consensus 334 ~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~--~~~~-~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLyRY 410 (597)
T PLN02249 334 TIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHN--HDGD-GALDETSLVELADVEVGKEYELVITTYAGLYRY 410 (597)
T ss_pred ccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecc--cCCc-ccCCCCcEecHHHcCCCCeEEEEEEcccceeEe
Confidence 9999999999999998887767899999999999999987 4321 001357899999999999999999999999999
Q ss_pred ccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEe
Q 007815 414 RLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEV 493 (588)
Q Consensus 414 r~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~ 493 (588)
++||+|+|+||+|++|+|+|+||+++++|+.|||++|.+++.||.++...+...|+.|.||++.++....|+||++|||+
T Consensus 411 ~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p~Hyvl~wei 490 (597)
T PLN02249 411 RVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYWEL 490 (597)
T ss_pred ecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999998766656799999999988877779999999999
Q ss_pred c-cC-----CCHHHHHHHHHHHHHhccChhhHHHhhcC-CcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 007815 494 S-GE-----VNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPT 566 (588)
Q Consensus 494 ~-~~-----~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g-~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~ 566 (588)
. .+ .+.+.+++|+..++++| |.+|+.+|..+ +|+||+|++|++|+|.+|+++++++|++.||||+|||++
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~e~~l-n~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~-- 567 (597)
T PLN02249 491 LGRDQSNALPSDEVMAKCCLEMEESL-NSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVS-- 567 (597)
T ss_pred eccccccCCCCHHHHHHHHHHHHHHh-CHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeC--
Confidence 3 21 45678889999999997 99999999986 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHhcccceeecccCC
Q 007815 567 NKTVLQILCNNIGKSYFSTAY 587 (588)
Q Consensus 567 ~~~~~~~l~~~~~~~~~~~~~ 587 (588)
+++++++|+++++++|+|+++
T Consensus 568 ~~~~~~~l~~~~~~~~~~~~~ 588 (597)
T PLN02249 568 LTPIMELLDSRVVSAHFSPSL 588 (597)
T ss_pred CHHHHHHHHhhhheeeccccC
Confidence 999999999999999999986
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=3.3e-111 Score=934.20 Aligned_cols=513 Identities=38% Similarity=0.669 Sum_probs=408.4
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCChhh--hhhcCCCcccccchHHHHHHhcCCCCCCccCC
Q 007815 22 LIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPES--FKSCVPLVTHEDLQPYIQRIIDGDISPILTGK 99 (588)
Q Consensus 22 ~~~~f~~~~~~~~~~Q~~~L~~iL~~~~~T~ygr~~gf~~i~t~ed--f~~~vPi~~Yed~~p~ieR~~~Ge~~~ll~~~ 99 (588)
.+++|++.++||+++|+++|++||+.|++|+|||+|||++|+|++| ||++|||++||||+|||+||++|| .+|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge-~~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGE-ENVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCC-CCCCCCC
Confidence 4789999999999999999999999999999999999999999999 999999999999999999999999 5699999
Q ss_pred CcceeeccccCCCCCcccccCChHHHHHHH--HHHHHHHHHHhccCC-C-CCCc--eEEEeecccccccCCCCeEecccc
Q 007815 100 PITTISRSSGTTQGKPKFLPFNDELMETTL--QIFRTSYAFRNREFP-I-GKGK--ALQFIYGSKQSKTKGGLNAGTATT 173 (588)
Q Consensus 100 pi~~f~~TSGTT~G~~K~iP~t~~~~~~~~--~~~~~~~~~~~~~~p-~-~~gk--~l~~~~~~~~~~t~~Gi~~g~~S~ 173 (588)
|+.+|..|||||++++|+||+|+++++.+. .++..|+.++.+++| . ..|| .|.+.+.+....|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999433999999999998866 457788888999999 5 5788 444445578899999999999999
Q ss_pred ccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHh
Q 007815 174 NVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIRE 253 (588)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI~~ 253 (588)
+++++ .+.++..+|++|.+++.+.|.++++||||+|+|.+++||++|+++||++|+.++++++++|+++|+||++
T Consensus 161 ~~~~~-----~~~~~~~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~ 235 (528)
T PF03321_consen 161 IPYRM-----IPPWFRSWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRD 235 (528)
T ss_dssp HHHT-------SCCHHG-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhh-----ChHHHccCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcC
Confidence 88874 3334345899999999999999999999999999889999999999999999999999999999999999
Q ss_pred cccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCcHHHHHHHHHHhCCCCeec
Q 007815 254 GVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMS 333 (588)
Q Consensus 254 g~~~~~~~~~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~~~~~~~l~~~~g~~~v~~ 333 (588)
|+++ .++|||+||++|+++|.+ + .+++++|||||++|+||++|++.+|+++|++++|++++++
T Consensus 236 G~~~--------------~~~p~p~rA~~L~~~~~~--~-~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~ 298 (528)
T PF03321_consen 236 GTLS--------------LLRPNPERAAELRAEFEK--G-RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQS 298 (528)
T ss_dssp TS----------------C-S--HHHHHHHHHHHCC--S-TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE
T ss_pred Cccc--------------cCCCCHHHHHHHHHhhcc--c-CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceee
Confidence 9995 457999999999999998 6 7899999999999999999999999999999999999999
Q ss_pred cccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccccceeec
Q 007815 334 ADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRY 413 (588)
Q Consensus 334 ~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~~Gl~RY 413 (588)
.+|+||||++|+|++++. .++.+.++.+||||||.+ +.+++ +.++++++.++||++|+.|||||||.+|||||
T Consensus 299 ~~y~ASEg~i~i~~~~~~----~~~~l~~~~~ffEFip~~--~~~~~-~~~~~~~l~~~ele~G~~YelviTt~~GLyRY 371 (528)
T PF03321_consen 299 KGYGASEGFIGIPLDPED----PGYVLAPDSGFFEFIPVD--EDEQN-PSEQPKTLLLHELEVGEEYELVITTNSGLYRY 371 (528)
T ss_dssp -EEEETTEEEEEES-CCC------EEE-TTSSEEEEEE-S--TT--------SSSEEGGG--TT-EEEEEEESTTS-SSE
T ss_pred ccccccceEEEEecCCCC----CceEeecCCeEEEEEecc--CCccc-ccCCCceecHHHhcCCCeEEEEEecccceeee
Confidence 999999999999988543 468889999999999998 43310 11468999999999999999999999999999
Q ss_pred ccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEE
Q 007815 414 RLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWE 492 (588)
Q Consensus 414 r~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE 492 (588)
|+||||+|+||+|++|+|+|+||.++++|+.|||++|.+|+.||.++++ ++|+++.+|++.++ .++.+|||++|||
T Consensus 372 ~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~~Y~~~~e 448 (528)
T PF03321_consen 372 RIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPPHYVLFWE 448 (528)
T ss_dssp EECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSBEEEEEEE
T ss_pred ecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999975 78999999999999 6788999999999
Q ss_pred eccCCCHHHHHHHHHHHHHhc--cChhhHHHhhc-CCcCCeEEEEeccchHHHHHHHHhcC-CCCCCCCCCCcccCCCCH
Q 007815 493 VSGEVNDEVLKECCNCLDRSF--VDAGYVSARKV-NAIGPLELRVVLKGTFQQILDHYLGL-GAALSQFKTPRCVGPTNK 568 (588)
Q Consensus 493 ~~~~~~~~~l~~~~~~ld~~L--~n~~Y~~~R~~-g~l~p~~v~~v~~gtf~~~~~~~~~~-G~~~~Q~K~Pr~~~~~~~ 568 (588)
+... ...++.|++.||++| .|++|+.+|+. |+|+||+|++|++|+|.+|+++++++ |++.+|||+|||++ ++
T Consensus 449 ~~~~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~--~~ 524 (528)
T PF03321_consen 449 LEGE--PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIR--DR 524 (528)
T ss_dssp ECS---HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS----TC
T ss_pred eCCC--chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccC--cc
Confidence 9655 558889999999998 59999999999 99999999999999999999999999 99999999999999 88
Q ss_pred HHH
Q 007815 569 TVL 571 (588)
Q Consensus 569 ~~~ 571 (588)
++.
T Consensus 525 ~~~ 527 (528)
T PF03321_consen 525 EFV 527 (528)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=1.9e-28 Score=260.79 Aligned_cols=391 Identities=18% Similarity=0.212 Sum_probs=252.0
Q ss_pred hcHHHHHHHHHHHHHHh-cCCChhhhhc----CC--CCCCChhhhhhcCCCcccccchHHHH-HHhcCCCCCCccCCCcc
Q 007815 31 KDAERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQ-RIIDGDISPILTGKPIT 102 (588)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~i~t~edf~~~vPi~~Yed~~p~ie-R~~~Ge~~~ll~~~pi~ 102 (588)
+..++.|++.|+.++++ .+|++|||++ |+ ..|++.+|+. ++|++++++++.... ++.+... +.+.
T Consensus 21 ~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~~~------~~i~ 93 (438)
T COG1541 21 KELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAVPK------EEIV 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccccc------cceE
Confidence 46788999999999997 8999999997 55 4789999998 799999999998877 6666543 4455
Q ss_pred eeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeecccccccCCCCeEeccccccccCchhh
Q 007815 103 TISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFK 182 (588)
Q Consensus 103 ~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~p~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~~~ 182 (588)
++..||||| |+|+.+|+|...+......+...+. ......|..+....+ -+...+| +... +
T Consensus 94 ~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~----~~g~~~gd~v~~~~~--yGl~tgg--------~~~~---~- 154 (438)
T COG1541 94 RIHASSGTT-GKPTVFGYTAKDIERWAELLARSLY----SAGVRKGDKVQNAYG--YGLFTGG--------LGLH---Y- 154 (438)
T ss_pred EEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHH----HccCCCCCEEEEEee--eccccCC--------chhH---H-
Confidence 689999999 9999999998765432221111111 001233432332221 1111111 0000 0
Q ss_pred hhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 007815 183 AEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITV 262 (588)
Q Consensus 183 ~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI~~g~~~~~~~~ 262 (588)
.... ......|. ++ .+-+.-++.|.+-.+
T Consensus 155 -ga~r-ig~~vip~--------------------------------~~-----------g~~~~~~~l~~df~~------ 183 (438)
T COG1541 155 -GAER-IGATVIPI--------------------------------SG-----------GNTERQLELMKDFKP------ 183 (438)
T ss_pred -HHHh-hCEEEEcc--------------------------------CC-----------ccHHHHHHHHHhcCC------
Confidence 0000 00011111 11 111122222222221
Q ss_pred hHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccC
Q 007815 263 PSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSS 339 (588)
Q Consensus 263 ~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaS 339 (588)
..+.+.++-...+|+++++. |..++-. +++ .++.|+ .++.++.+++.| |++++ +.||+|
T Consensus 184 ----tvI~~tps~~l~lae~~~~~--------G~~~~~~-~lk---~~i~gaE~~see~R~~ie~~~-g~~~~-diYGlt 245 (438)
T COG1541 184 ----TVIAATPSYLLYLAEEAEEE--------GIDPDKL-SLK---KGIFGAEPWSEEMRKVIENRF-GCKAF-DIYGLT 245 (438)
T ss_pred ----cEEEEChHHHHHHHHHHHHc--------CCChhhc-cee---EEEEecccCCHHHHHHHHHHh-CCcee-eccccc
Confidence 11333333334456665543 3233222 467 667776 589999999999 69998 999999
Q ss_pred ccc-ceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccc----cceeecc
Q 007815 340 EGW-IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV----AGLYRYR 414 (588)
Q Consensus 340 Eg~-~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~----~Gl~RYr 414 (588)
|++ +| ..+|.... ++|++.|..++|.++++ . ++ .|..|+.||||+||+ ..|+||+
T Consensus 246 E~~g~g---~~eC~~~~-glhi~eD~~~~Ei~dP~--t---------~e-----~l~dge~GelV~T~L~~~~~PlIRYr 305 (438)
T COG1541 246 EGFGPG---AGECTERN-GLHIWEDHFIFEIVDPE--T---------GE-----QLPDGERGELVITTLTKEGMPLIRYR 305 (438)
T ss_pred cccCCc---cccccccc-CCCcchhhceeeeecCC--c---------Cc-----cCCCCCeeEEEEEeccccCcceEEEE
Confidence 984 44 24565543 79999999999999987 2 22 567899999999996 4599999
Q ss_pred cCCEEEEeceeCCCC-----EEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEE
Q 007815 415 LGDVVKVMGFHNSTP-----ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVI 489 (588)
Q Consensus 415 ~GDvv~v~~~~~~~P-----~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~ 489 (588)
|||++++....|.|. ..++.||.+||+.+.|.+|++.+|+.+|.+... +.. +|.+............+
T Consensus 306 tgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~~~~d~L~V 378 (438)
T COG1541 306 TGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILTRNGGLDELTV 378 (438)
T ss_pred cCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEecCCCCceEEE
Confidence 999999998777553 348999999999999999999999999987532 222 89887765333456778
Q ss_pred EEEeccC-CCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCcccC
Q 007815 490 FWEVSGE-VNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVG 564 (588)
Q Consensus 490 ~vE~~~~-~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~ 564 (588)
-||...+ ......+++...+...+ ..-.-.+++|.+|.+|+.++.. | |.+|++.
T Consensus 379 ~vE~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~v~~v~~g~l~r~~------~------K~krvvd 433 (438)
T COG1541 379 RVELENEAEELEDERRLAKKLIKNI---------KSELGVRVEVELVEPGELPRTE------G------KAKRVVD 433 (438)
T ss_pred EEEecCcccchHHHHHHHHHHHHHH---------HhhcCCceEEEEEeccceeccc------C------ceeEEEE
Confidence 8888543 12122223333333332 4445688999999999977432 2 7778775
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=1.9e-27 Score=260.42 Aligned_cols=388 Identities=14% Similarity=0.126 Sum_probs=225.3
Q ss_pred hcHHHHHHHHHHHHHHh-cCCChhhhhc----CCC--CCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCcc--CCCc
Q 007815 31 KDAERIQRETLRKILEE-NASAEYLQNL----GLN--GRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILT--GKPI 101 (588)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf~--~i~t~edf~~~vPi~~Yed~~p~ieR~~~Ge~~~ll~--~~pi 101 (588)
.+.++.|.+.|+++|++ +++++|||++ |+. .|++.+||+ ++|+++++|++..-.-. .+.=.+++ .+.+
T Consensus 12 ~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~~~~~i 88 (445)
T TIGR03335 12 GELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSADWKDI 88 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccCCHHHe
Confidence 35678999999999998 6899999995 774 799999998 69999999997653100 00001221 2335
Q ss_pred ceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCCCCCC-ceEEEeecccccccCCCCeEeccccccccCch
Q 007815 102 TTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPIGKG-KALQFIYGSKQSKTKGGLNAGTATTNVYRSST 180 (588)
Q Consensus 102 ~~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~p~~~g-k~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~ 180 (588)
..+..||||| |+||.+++|.+.+......+...+ ....+..+ +.+. .++ -|.-.| +..+
T Consensus 89 ~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~~----~~~G~~~gD~vl~-~~~-------~~~~~g---~~~~---- 148 (445)
T TIGR03335 89 YTIHETSGTS-GTPKSFFLTWDDWKRYAEKYARSF----VSQGFTAGDRMVI-CAS-------YGMNVG---ANTM---- 148 (445)
T ss_pred EEEEeCCCCC-CCcceeeecHHHHHHHHHHHHHHH----HHcCCCCCCeEEE-Eec-------CCcchh---HHHH----
Confidence 5677899999 999999999876644322211111 01123333 3222 110 000000 0000
Q ss_pred hhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 007815 181 FKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI 260 (588)
Q Consensus 181 ~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI~~g~~~~~~ 260 (588)
.+..+.++ ..++.... . +..++.|++..+..
T Consensus 149 ---------------------------~~~~~~~G------a~vi~~~~---~-----------~~~~~~i~~~~~t~-- 179 (445)
T TIGR03335 149 ---------------------------TLAAREVG------MSIIPEGK---C-----------TFPIRIIESYRPTG-- 179 (445)
T ss_pred ---------------------------HHHHHHcC------CEEEcCCc---h-----------hHHHHHHHHhCCCE--
Confidence 00000000 00111000 0 01122333322211
Q ss_pred CchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccc
Q 007815 261 TVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYG 337 (588)
Q Consensus 261 ~~~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~Yg 337 (588)
+.+.++....+|+++++. |+-.. .++++ .+++|| ....++.+++.| |++++ +.||
T Consensus 180 --------l~~~ps~ll~La~~~~~~--------g~~~~-~~~lr---~ii~gGE~l~~~~r~~ie~~~-g~~v~-~~YG 237 (445)
T TIGR03335 180 --------IVASVFKLLRLARRMKAE--------GIDPA-ESSIR---RLVVGGESFADESRNYVEELW-GCEVY-NTYG 237 (445)
T ss_pred --------EEECHHHHHHHHHHHHHc--------CCCcc-cCcce---EEEEcCCCCCHHHHHHHHHHh-CCcEE-ecCC
Confidence 222222222334443321 22222 34688 666666 355677888888 59999 9999
Q ss_pred cCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEccc--------cc
Q 007815 338 SSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--------AG 409 (588)
Q Consensus 338 aSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~--------~G 409 (588)
+||+.++. +|.. ..++|+..+..++|+++++ . .+ .|++|+.||||+|++ ..
T Consensus 238 ~TE~~~~~----~c~~-~~g~h~~~d~~~vEIvDp~--~---------~~-----~vp~Ge~GELvvT~L~~~~~r~~~P 296 (445)
T TIGR03335 238 STEGTMCG----ECQA-VAGLHVPEDLVHLDVYDPR--H---------QR-----FLPDGECGRIVLTTLLKPGERCGSL 296 (445)
T ss_pred hhhhhheE----EecC-CCCccccCCceEEEEEcCC--C---------CC-----CCcCCCceEEEEEecCCCCccCCce
Confidence 99985432 3322 2479988888899999875 1 12 357899999999997 44
Q ss_pred eeecccCCEEEEe-ceeCCC----CEEEEEeecCceeeeeeeecCHHHHHHHHHHHH--HHhhhcCCeeEeeEEeecCC-
Q 007815 410 LYRYRLGDVVKVM-GFHNST----PELKFICRRNLLLTINIDKNTEKDLQLSVDEAA--QLLAEEKQEVVDFTSHVDLS- 481 (588)
Q Consensus 410 l~RYr~GDvv~v~-~~~~~~----P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~--~~l~~~g~~l~~f~~~~~~~- 481 (588)
|+||||||++++. ...|.| |++..+||.+||++++|.||++.+|+++|.+.. ..+ ++ +|.+..+..
T Consensus 297 liRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~--~~----~~~~~~~~~~ 370 (445)
T TIGR03335 297 LINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSL--TG----EYEAFLYGEE 370 (445)
T ss_pred EEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCC--Cc----cEEEEEecCC
Confidence 9999999999974 456644 467778999999999999999999999998731 111 22 787766532
Q ss_pred CCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHh---hcCCcCCeEEEEeccchHHH
Q 007815 482 TDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSAR---KVNAIGPLELRVVLKGTFQQ 542 (588)
Q Consensus 482 ~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R---~~g~l~p~~v~~v~~gtf~~ 542 (588)
.......+.+|...... ...+.+.+.+.+++ ...++..+ +.+ .-.++|.++++|++++
T Consensus 371 ~~~~~~~v~~e~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 371 EGEITLRVSLECEDKDN-CSIHDIQENFTGTF-LKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred CCCceEEEEEEecCccc-chHHHHHHHHHHHH-hhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 11234556677643321 23334444444441 11122111 122 3456899999999974
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.94 E-value=4.8e-25 Score=239.34 Aligned_cols=380 Identities=16% Similarity=0.158 Sum_probs=219.8
Q ss_pred hcHHHHHHHHHHHHHHh-cCCChhhhhc----CC--CCCCChhhhhhcCCCcccccchHHHHH-HhcCCCCCCccCCCcc
Q 007815 31 KDAERIQRETLRKILEE-NASAEYLQNL----GL--NGRTDPESFKSCVPLVTHEDLQPYIQR-IIDGDISPILTGKPIT 102 (588)
Q Consensus 31 ~~~~~~Q~~~L~~iL~~-~~~T~ygr~~----gf--~~i~t~edf~~~vPi~~Yed~~p~ieR-~~~Ge~~~ll~~~pi~ 102 (588)
.+.++.|.+.|+++|++ .++++|||++ |+ +.|+|.+||+ ++|++++++++..... +... ..+.+.
T Consensus 6 ~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~~------~~~~~~ 78 (422)
T TIGR02155 6 DELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFAV------PREQVV 78 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccCC------ChHHcE
Confidence 45678999999999998 6899999985 66 4789999998 6999999999765321 2211 123344
Q ss_pred eeeccccCCCCCcccccCChHHHHHHHHHH-HHHHHHHhccCCCCCCceEEEeecccccccCCCCeEeccccccccCchh
Q 007815 103 TISRSSGTTQGKPKFLPFNDELMETTLQIF-RTSYAFRNREFPIGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTF 181 (588)
Q Consensus 103 ~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~-~~~~~~~~~~~p~~~gk~l~~~~~~~~~~t~~Gi~~g~~S~~~~~~~~~ 181 (588)
++..||||| |+||.+++|...+....... ..+. .+.+..+-.+...++ +|...+.
T Consensus 79 ~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~~~~-----~~g~~~~d~~~~~~~-----------~~~~~~~------- 134 (422)
T TIGR02155 79 RIHASSGTT-GKPTVVGYTQNDIDTWSSVVARSIR-----AAGGRPGDLIHNAYG-----------YGLFTGG------- 134 (422)
T ss_pred EEEECCCCC-CCCeEeccCHHHHHHHHHHHHHHHH-----HcCCCCCcEEEEccC-----------ccccchh-------
Confidence 666899999 99999999987664332221 1111 111222322111110 0000000
Q ss_pred hhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 007815 182 KAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRIT 261 (588)
Q Consensus 182 ~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI~~g~~~~~~~ 261 (588)
... .|..+.++ ...+... ...-+.+++.|++..+.-
T Consensus 135 --~~~---------------------~~~~~~~g------~~~~~~~------------~~~~~~~~~~i~~~~~t~--- 170 (422)
T TIGR02155 135 --LGA---------------------HYGAEKLG------CTVVPIS------------GGQTEKQVQLIQDFKPDI--- 170 (422)
T ss_pred --HHH---------------------HHHHHHcC------cEEEecC------------CCCHHHHHHHHHHHCCCE---
Confidence 000 00000000 0011000 001133445555555432
Q ss_pred chHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeecccccc
Q 007815 262 VPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGS 338 (588)
Q Consensus 262 ~~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~Yga 338 (588)
+.+.++-...+|+++.+. ++-.+. ++++ .+++|| ....++.+++.| |++++ +.||+
T Consensus 171 -------l~~~Ps~l~~L~~~~~~~--------~~~~~~-~~lr---~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG~ 229 (422)
T TIGR02155 171 -------IMVTPSYMLNLLEELKRM--------GIDPAQ-TSLQ---VGIFGAEPWTNAMRKEIEARL-GMKAT-DIYGL 229 (422)
T ss_pred -------EEEcHHHHHHHHHHHHHc--------CCCccc-CceE---EEEEeCCcCCHHHHHHHHHHh-CCceE-ecccc
Confidence 222222223334333221 221111 3577 555555 366777888889 58999 99999
Q ss_pred Cccc-ceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcccc----ceeec
Q 007815 339 SEGW-IGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA----GLYRY 413 (588)
Q Consensus 339 SEg~-~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~~----Gl~RY 413 (588)
||+. .++.. .|.....++++..+..++|+++++ . ++ +|++|+.||||+|+.. .+.||
T Consensus 230 tE~~~~~~~~--~~~~~~~g~~~~~~~~~~eivd~~--~---------g~-----~v~~Ge~Gelvvt~~~~~~~p~~ry 291 (422)
T TIGR02155 230 SEVIGPGVAM--ECVETQDGLHIWEDHFYPEIIDPH--T---------GE-----VLPDGEEGELVFTTLTKEALPVIRY 291 (422)
T ss_pred hhhcCCceee--cccccCCCceEecCeeEEEEECCC--C---------CC-----CCCCCCeeEEEEecCCccccceeeE
Confidence 9963 22211 231112467777677788998764 1 12 4578999999999852 36799
Q ss_pred ccCCEEEEeceeC--CCC-EEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEE
Q 007815 414 RLGDVVKVMGFHN--STP-ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIF 490 (588)
Q Consensus 414 r~GDvv~v~~~~~--~~P-~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~ 490 (588)
+|||+++++. .| ..| .+.|.||.+|++++.|++|++.+|+.+|.+. .++. ..|.+..+..+.+-..+++
T Consensus 292 ~TGDl~~~~~-~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~------~~v~-~~~q~~~~~~~~~~~~~~~ 363 (422)
T TIGR02155 292 RTRDLTRLLP-GTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKM------DELS-PHYQLELTRNGHMDELTLK 363 (422)
T ss_pred EcCcEEEEEC-CCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhC------cCcC-CCEEEEEEcCCCccEEEEE
Confidence 9999999875 22 223 3589999999999999999999999999764 2321 1466655432222366777
Q ss_pred EEeccCC----CHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEEEeccchHH
Q 007815 491 WEVSGEV----NDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQ 541 (588)
Q Consensus 491 vE~~~~~----~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~~gtf~ 541 (588)
||...+. ..+..+.+.+.|.+.+ +...-..++|.++.+|+|.
T Consensus 364 v~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~v~~~~~~~lp 409 (422)
T TIGR02155 364 VELKPESYTLRLHEQASLLAGEIQHTI---------KQEVGVSMDVHLVEPGSLP 409 (422)
T ss_pred EEEecCcccccchHHHHHHHHHHHHHH---------HhccCcEEEEEEECCCCcc
Confidence 8875331 1122233344444443 2222223679999999986
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.90 E-value=4.5e-22 Score=215.78 Aligned_cols=316 Identities=12% Similarity=0.151 Sum_probs=205.1
Q ss_pred cHHHHHHHHHHHHHHh-cCCChhhhhcCCCCCCChhhhhhcCCCcccccchHHHHHHhcCC--CCCC------------c
Q 007815 32 DAERIQRETLRKILEE-NASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGD--ISPI------------L 96 (588)
Q Consensus 32 ~~~~~Q~~~L~~iL~~-~~~T~ygr~~gf~~i~t~edf~~~vPi~~Yed~~p~ieR~~~Ge--~~~l------------l 96 (588)
..++.|++.|+++|++ .++++|||++. .+ +++ ++|+++++++....+++.... .+.. +
T Consensus 23 ~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r~f 95 (430)
T TIGR02304 23 ALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTRDF 95 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhccc
Confidence 5678999999999998 69999999973 33 566 799999999999999998531 1100 0
Q ss_pred c--CCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC--CCC-CceEEEeecccccccCCCCeEecc
Q 007815 97 T--GKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP--IGK-GKALQFIYGSKQSKTKGGLNAGTA 171 (588)
Q Consensus 97 ~--~~pi~~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~p--~~~-gk~l~~~~~~~~~~t~~Gi~~g~~ 171 (588)
. .+++ ....||||| |+|-.|.++++...... + ..+.+..| +.. +|...+.++..
T Consensus 96 ~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~~-a-----~~~~~~~~~g~~~g~r~a~~~~~~~------------- 154 (430)
T TIGR02304 96 KPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMWA-G-----GILAKVLPDGLFAKHRIAFFLRADN------------- 154 (430)
T ss_pred ccccCcE-EEEECCCCC-CCceEEEECHHHHHHHH-H-----HHHhhhCccccccCCcEEEEEccCh-------------
Confidence 0 0232 456799999 99999999987653211 1 11122222 233 35444333321
Q ss_pred ccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHHHHHHHHH
Q 007815 172 TTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDI 251 (588)
Q Consensus 172 S~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w~~lv~dI 251 (588)
..+ . . +. .. ++ + +..|++. +.+++.++.|
T Consensus 155 -~ly-~------~---~~----~~----------------~~---------~----------~~~~~l~-~~~~~~l~~L 183 (430)
T TIGR02304 155 -NLY-Q------S---VN----NR----------------WI---------S----------LDFFDLL-APFQAHIKRL 183 (430)
T ss_pred -hHH-H------H---HH----hc----------------cc---------e----------eeecCCC-cCHHHHHHHH
Confidence 000 0 0 00 00 00 0 1122334 6688888888
Q ss_pred HhcccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecC---cHHHHHHHHHHhCC
Q 007815 252 REGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGD 328 (588)
Q Consensus 252 ~~g~~~~~~~~~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~ 328 (588)
.+-.+. .|.++++....+|+++++. ++ ++ +++ .++++| ....++.+++.| |
T Consensus 184 ~~~~P~----------~L~g~pS~l~~LA~~~~~~--------~l--~~--~~k---~ii~~~E~l~~~~r~~Ie~~f-g 237 (430)
T TIGR02304 184 NQRKPS----------IIVAPPSVLRALALEVMEG--------EL--TI--KPK---KVISVAEVLEPQDRELIRNVF-K 237 (430)
T ss_pred HHhCCC----------EEEEcHHHHHHHHHHHHhc--------CC--CC--Cce---EEEEccCCCCHHHHHHHHHHh-C
Confidence 777763 3666666666677665431 23 22 356 455554 466777899999 5
Q ss_pred CCeeccccccCcccceecCCCCCCCcccceeeccCceEEEE--EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc
Q 007815 329 LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEF--IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN 406 (588)
Q Consensus 329 ~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Ef--ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt 406 (588)
++|+ +.||+|||+++. +|+. ++||+..+..++|+ ++++ | .++.|||+
T Consensus 238 ~~V~-~~YG~tEg~la~----eC~~--g~lHl~ed~~~vE~~ivD~~-----------------------~-~~~~ViT~ 286 (430)
T TIGR02304 238 NTVH-QIYQATEGFLAS----TCRC--GTLHLNEDLVHIEKQYLDEH-----------------------K-RFVPIITD 286 (430)
T ss_pred CCee-EccCCchhheEE----ecCC--CCEEEccccEEEEeeEECCC-----------------------C-ceEEEEec
Confidence 9999 899999976663 4543 46999999999994 5432 1 23459999
Q ss_pred c----cceeecccCCEEEEeceeCCCC----EE-EEEeecCceeee---ee--eecCHHHHHHHHHHHHHHhhhcCCeeE
Q 007815 407 V----AGLYRYRLGDVVKVMGFHNSTP----EL-KFICRRNLLLTI---NI--DKNTEKDLQLSVDEAAQLLAEEKQEVV 472 (588)
Q Consensus 407 ~----~Gl~RYr~GDvv~v~~~~~~~P----~i-~f~gR~~d~i~~---~G--ekv~e~~v~~al~~~~~~l~~~g~~l~ 472 (588)
+ .+|+||+|||++++.+..|.|+ +| ++.||.+|++.+ +| .+|++..+..++....+ + +.
T Consensus 287 L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~-----~--i~ 359 (430)
T TIGR02304 287 FTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLP-----L--IV 359 (430)
T ss_pred CCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCC-----C--Cc
Confidence 6 4599999999999888777553 56 589999999976 34 44599888887664322 2 46
Q ss_pred eeEEeecCCCCCceEEEEEEe
Q 007815 473 DFTSHVDLSTDPGHYVIFWEV 493 (588)
Q Consensus 473 ~f~~~~~~~~~~~~y~~~vE~ 493 (588)
+|.++.. ...+.++.++.
T Consensus 360 ~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 360 EYRVLQT---GSAQLELIADC 377 (430)
T ss_pred eEEEEEc---cCCeEEEEEEe
Confidence 8988765 35677766654
No 9
>PRK07529 AMP-binding domain protein; Validated
Probab=99.56 E-value=2.9e-13 Score=154.69 Aligned_cols=137 Identities=12% Similarity=0.150 Sum_probs=96.2
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+++|+ .+.+||. ....+++++.+ +++++ +.||+||+.+.....+.. ..+..|..+ | +.-+.++..+
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~~-p-~~~v~i~~~d- 403 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLRL-P-YQRVRVVILD- 403 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCccccc-C-CceEEEEEcC-
Confidence 46788 6677763 55667777778 58999 999999986543322211 122234432 2 2345555544
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+++ . ...++.+|+.|||+|++ +.||+ +|+|||+++++. .+.+.|+||.+
T Consensus 404 -~~g--------~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~l~i~GR~~ 468 (632)
T PRK07529 404 -DAG--------R--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDA----DGYFWLTGRAK 468 (632)
T ss_pred -CCC--------c--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcC----CceEEEEeccc
Confidence 221 1 01256789999999976 45554 699999999985 68999999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+|+++|++|++.+||++|.+.
T Consensus 469 d~i~~~G~~i~p~eIE~~l~~~ 490 (632)
T PRK07529 469 DLIIRGGHNIDPAAIEEALLRH 490 (632)
T ss_pred CEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999863
No 10
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=1.1e-14 Score=150.92 Aligned_cols=133 Identities=18% Similarity=0.191 Sum_probs=100.6
Q ss_pred CCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC---CcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---PELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~---~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
.+|+++ --|| .+..++++...+ ||.+. ..+||.||.+.+.--.+.+ ....|..+.|+ =|..-++
T Consensus 305 sSLrll---QVGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~---DEvrvvD-- 374 (542)
T COG1021 305 SSLRLL---QVGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPD---DEVRVVD-- 374 (542)
T ss_pred hheeEE---eecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhcccccCCchHheeecCCCcCCCc---ceeEEec--
Confidence 368844 4455 366778898889 69999 9999999987654211111 12245555553 3555555
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEc---cccceee--------------cccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVT---NVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvT---t~~Gl~R--------------Yr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+++ .+|.+||+|+|... |+.|||| ||+||+|+.+. .+.+.+.||.|
T Consensus 375 ~dg-------------~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~----dGyl~V~GR~K 437 (542)
T COG1021 375 ADG-------------NPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDP----DGYLVVEGRVK 437 (542)
T ss_pred CCC-------------CCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecC----CceEEEEeeeh
Confidence 333 26789999999984 5799997 99999999995 78999999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEAA 461 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~~ 461 (588)
|.||.+||||..+|||+.+....
T Consensus 438 DQINRgGEKIAAeEvEn~LL~HP 460 (542)
T COG1021 438 DQINRGGEKIAAEEVENLLLRHP 460 (542)
T ss_pred hhhccccchhhHHHHHHHHhhCc
Confidence 99999999999999999998753
No 11
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.55 E-value=2.6e-12 Score=146.87 Aligned_cols=229 Identities=13% Similarity=0.103 Sum_probs=132.7
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCC--CCeeccccccCcccceecC-CC---CCCCcccceeeccCceEEEEEe
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGD--LPLMSADYGSSEGWIGANV-NP---SLPPELATFAVLPNIGYFEFIP 371 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~--~~v~~~~YgaSEg~~~~~~-~~---~~~~~~~~~~l~~~~~~~Efip 371 (588)
.++|+ .+.+||. ....+.+.+.+++ ++++ +.||+||+...+.. .+ .+.++..|..+ .+.-+++++
T Consensus 366 ~~~lr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~--~g~~~~i~d 439 (637)
T PRK00174 366 LSSLR---LLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATRPL--PGIQPAVVD 439 (637)
T ss_pred cccee---EEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccCCC--CCceEEEEC
Confidence 45788 6666663 4445566666653 8899 99999997432211 11 11122233322 233445554
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEccc-----ccee----------------ecccCCEEEEeceeCCCCE
Q 007815 372 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY----------------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~-----~Gl~----------------RYr~GDvv~v~~~~~~~P~ 430 (588)
.+ ++ +++.|+.|||+|+.. .||| +|+|||+++++. .+.
T Consensus 440 ~~------------g~-----~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~ 498 (637)
T PRK00174 440 EE------------GN-----PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDE----DGY 498 (637)
T ss_pred CC------------CC-----CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcC----CCc
Confidence 32 22 456799999999851 3333 499999999974 689
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCC-ceEEEEEEeccCC--CHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDP-GHYVIFWEVSGEV--NDEVLKECCN 507 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~-~~y~~~vE~~~~~--~~~~l~~~~~ 507 (588)
+.|+||.+|+|+++|++|++.+||++|.+. .+ +.+..++....... ..-+.||++..+. +.+..+++.+
T Consensus 499 l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~ 570 (637)
T PRK00174 499 YWITGRVDDVLNVSGHRLGTAEIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRN 570 (637)
T ss_pred EEEEEecccEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999753 23 23444432111111 2234566654332 2222344444
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEe------ccchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhccc
Q 007815 508 CLDRSFVDAGYVSARKVNAIGPLELRVV------LKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNI 578 (588)
Q Consensus 508 ~ld~~L~n~~Y~~~R~~g~l~p~~v~~v------~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~~ 578 (588)
.+.+.| +. ...|-.+.+| ..|-..+-.=..+.+|.. +.+.+.-+. |++.++.+++..
T Consensus 571 ~l~~~l--~~--------~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~ 633 (637)
T PRK00174 571 WVRKEI--GP--------IAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLA--DPSVVEKLIEAR 633 (637)
T ss_pred HHHhhc--CC--------ccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCccccc--CHHHHHHHHHHH
Confidence 444443 11 2345556665 234433322112233432 455566777 899998887643
No 12
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.55 E-value=4.3e-13 Score=150.32 Aligned_cols=134 Identities=16% Similarity=0.187 Sum_probs=93.3
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.++|+ .+.+||. ....+++++.+++++++ +.||+||+...+...+.. ..+..|..+ ++. -+.+++.+
T Consensus 298 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~-~g~-~v~i~d~~- 370 (539)
T PRK06334 298 LPSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGMPI-RGM-DVLIVSEE- 370 (539)
T ss_pred ccccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCceec-CCC-EEEEEcCC-
Confidence 46788 7777773 55667777788778898 999999975433221111 111233332 221 22233321
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~---------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+. .++++|+.|||+|.+ +.||| +|+|||+++++. .+.+.|+||
T Consensus 371 ----------~~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~----~G~l~~~GR 431 (539)
T PRK06334 371 ----------TK-----VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR----HGELFLKGR 431 (539)
T ss_pred ----------CC-----ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC----CCeEEEEec
Confidence 11 256789999999965 35554 699999999985 678999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+|+|+++|++|++.|||++|.+.
T Consensus 432 ~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 432 LSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred cCCeEEECCEEECHHHHHHHHHHc
Confidence 999999999999999999999864
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.54 E-value=3.8e-12 Score=145.05 Aligned_cols=228 Identities=13% Similarity=0.095 Sum_probs=132.3
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhC--CCCeeccccccCcccce-ecCCC---CCCCcccceeeccCceEEEEEe
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAG--DLPLMSADYGSSEGWIG-ANVNP---SLPPELATFAVLPNIGYFEFIP 371 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g--~~~v~~~~YgaSEg~~~-~~~~~---~~~~~~~~~~l~~~~~~~Efip 371 (588)
.++|+ .+.+||. ....+.+.+.++ +++++ +.||+||+... +...+ ...++..|..+ + +.-++.++
T Consensus 357 l~~lr---~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~-~-g~~~~i~d 430 (625)
T TIGR02188 357 LSSLR---LLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATLPF-F-GIEPAVVD 430 (625)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccCCc-C-CceEEEEC
Confidence 35688 6676663 444556666665 38899 99999997432 21111 11222233322 2 33444444
Q ss_pred CCCCCcccccccCCCccccccccC-CCCeEEEEEcc-----cccee----------------ecccCCEEEEeceeCCCC
Q 007815 372 QRLGNLESQVLCIEPKPVGLTEVK-VGEEYEIIVTN-----VAGLY----------------RYRLGDVVKVMGFHNSTP 429 (588)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~eve-~G~~yELVvTt-----~~Gl~----------------RYr~GDvv~v~~~~~~~P 429 (588)
.+ +. +++ +|+.|||+|+. ..||| +|+|||+++++. ..
T Consensus 431 ~~------------g~-----~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG 489 (625)
T TIGR02188 431 EE------------GN-----PVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DG 489 (625)
T ss_pred CC------------CC-----CCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CC
Confidence 22 12 345 79999999976 23444 499999999975 67
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecC-CCCCceEEEEEEeccCC--CHHHHHHHH
Q 007815 430 ELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDL-STDPGHYVIFWEVSGEV--NDEVLKECC 506 (588)
Q Consensus 430 ~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~-~~~~~~y~~~vE~~~~~--~~~~l~~~~ 506 (588)
.+.|+||.+|+|+++|++|++.+||++|.+. .+ |.+..++... ......-+.||.+..+. +.+..+++.
T Consensus 490 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~------p~--V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~ 561 (625)
T TIGR02188 490 YIWITGRVDDVINVSGHRLGTAEIESALVSH------PA--VAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELR 561 (625)
T ss_pred cEEEEecccCEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHH
Confidence 8999999999999999999999999999863 23 3355443211 11112334667664332 222333444
Q ss_pred HHHHHhccChhhHHHhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 007815 507 NCLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 576 (588)
Q Consensus 507 ~~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 576 (588)
+.+.+.| .....|-.|.+++ .|-..+-.=+.+..|.. .+++.+.-+. |++.++.+++
T Consensus 562 ~~~~~~l----------~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~--~p~~~~~~~~ 624 (625)
T TIGR02188 562 KHVRKEI----------GPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLE--DPSVVEELIE 624 (625)
T ss_pred HHHHhhc----------CCCccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCccccc--CHHHHHHHHh
Confidence 4444443 1123444555543 34433322222233421 2356677778 8999998875
No 14
>PRK09274 peptide synthase; Provisional
Probab=99.52 E-value=2.6e-12 Score=143.81 Aligned_cols=142 Identities=14% Similarity=0.127 Sum_probs=94.0
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhC-CCCeeccccccCcccceecCCCC-----------C-CCcccceeeccCc
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPS-----------L-PPELATFAVLPNI 364 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g-~~~v~~~~YgaSEg~~~~~~~~~-----------~-~~~~~~~~l~~~~ 364 (588)
.|+++ .+.+||. ....+++++.++ +++++ +.||+||+......... . .....|..+ | +
T Consensus 287 ~~~lr---~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~-~-~ 360 (552)
T PRK09274 287 LPSLR---RVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGRPV-D-G 360 (552)
T ss_pred Cchhh---EEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCccC-C-C
Confidence 46788 6677773 566677888886 47898 99999997532211110 0 000122322 2 3
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---ccce------------------eecccCCEEEEec
Q 007815 365 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGL------------------YRYRLGDVVKVMG 423 (588)
Q Consensus 365 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl------------------~RYr~GDvv~v~~ 423 (588)
.-+.+++.+ +.. .+..-...++.+|+.|||+|++ +.|| .||+|||+++++.
T Consensus 361 ~~~~ivd~~--~~~------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~ 432 (552)
T PRK09274 361 VEVRIIAIS--DAP------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA 432 (552)
T ss_pred ceEEEEecc--ccc------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc
Confidence 344555543 110 0000012356789999999955 2333 3899999999985
Q ss_pred eeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 424 FHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 424 ~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 433 ----dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 433 ----QGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred ----CCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 678999999999999999999999999999864
No 15
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.51 E-value=2.4e-12 Score=144.11 Aligned_cols=132 Identities=16% Similarity=0.052 Sum_probs=92.3
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.++|+ .++.||. ....+.+++.+ +++++ +.||+||+.+.....+. ..++..|.. . .+.-+++++.+
T Consensus 322 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~~-~-~~~~~~i~d~~- 393 (549)
T PRK07788 322 TSSLK---IIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVGRP-P-KGVTVKILDEN- 393 (549)
T ss_pred CCcee---EEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCcccC-C-CCcEEEEECCC-
Confidence 46788 6676663 56667777778 47888 99999997432211111 111222332 2 23345555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------ecccCCEEEEeceeCCCCEEEEEeecCcee
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 441 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 441 (588)
+ + +++.|+.|||+|++ +.||+ +|+|||+++.+. ...+.|+||.+|+|
T Consensus 394 ---~--------~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i 453 (549)
T PRK07788 394 ---G--------N-----EVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMI 453 (549)
T ss_pred ---c--------C-----CCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceE
Confidence 1 2 45679999999987 35565 689999999875 67899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007815 442 TINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 442 ~~~Gekv~e~~v~~al~~~ 460 (588)
+++|++|++.+||+++.+.
T Consensus 454 ~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 454 VSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999853
No 16
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.50 E-value=6.3e-12 Score=141.43 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=94.8
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceec--CCCCC--CCcccceeeccCceEEEEEeCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGAN--VNPSL--PPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~--~~~~~--~~~~~~~~l~~~~~~~Efip~~ 373 (588)
++.++ .+..||. ....+++.+.+++++++ +.||+||+..... ..... ..+..|. ...+.-.+.++++
T Consensus 318 ~~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~--~~~~~~v~i~d~~ 391 (560)
T PLN02574 318 LKSLK---QVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGL--LAPNMQAKVVDWS 391 (560)
T ss_pred cccce---EEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceee--eCCCcEEEEEeCC
Confidence 45677 6666663 55566677777778999 9999999753221 11111 1122232 2344566677654
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+ + .++++|+.|||+|++ +.||| +|+|||+++++. ...+.|+||
T Consensus 392 --~---------g-----~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR 451 (560)
T PLN02574 392 --T---------G-----CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDR 451 (560)
T ss_pred --C---------C-----cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEec
Confidence 1 1 245789999999976 35555 599999999985 688999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+|+++++|++|++.+||.+|...
T Consensus 452 ~~d~i~~~G~~v~~~eiE~~l~~~ 475 (560)
T PLN02574 452 LKEIIKYKGFQIAPADLEAVLISH 475 (560)
T ss_pred chhheEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999753
No 17
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.50 E-value=3.4e-12 Score=146.49 Aligned_cols=231 Identities=14% Similarity=0.087 Sum_probs=130.8
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.++|+ .+.+||. ....+.+++.+ ++++. +.||+||+...+..... .+.+..|..+ .+.-.++++.+
T Consensus 379 l~~Lr---~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~--~g~~~~i~d~~- 450 (647)
T PTZ00237 379 LSNLK---EIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGVPS--IFIKPSILSED- 450 (647)
T ss_pred cchhe---EEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCccCc--CCceEEEECCC-
Confidence 35788 6677763 45556677777 48998 99999997533211111 1112233321 22334444432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc------cccee---------------ecccCCEEEEeceeCCCCEEEE
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN------VAGLY---------------RYRLGDVVKVMGFHNSTPELKF 433 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt------~~Gl~---------------RYr~GDvv~v~~~~~~~P~i~f 433 (588)
+ .++++|+.|||+++. +.||| +|+|||+++++. .+.+.|
T Consensus 451 -----------g-----~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~----dG~l~i 510 (647)
T PTZ00237 451 -----------G-----KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDE----NGYYTI 510 (647)
T ss_pred -----------C-----CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECC----CCeEEE
Confidence 1 256789999999973 35666 499999999985 689999
Q ss_pred EeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEe--ecCCCCCceEEEEEEeccC-CC-HHHHHHHHHHH
Q 007815 434 ICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH--VDLSTDPGHYVIFWEVSGE-VN-DEVLKECCNCL 509 (588)
Q Consensus 434 ~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~--~~~~~~~~~y~~~vE~~~~-~~-~~~l~~~~~~l 509 (588)
+||.+|+|+++|++|++.+||++|.+. + + |.+-.++ ++.. ....-+.||-+..+ .. ....+++.+.|
T Consensus 511 ~GR~dd~i~~~G~rI~p~eIE~~l~~~-p-----~--V~eaavvg~~~~~-~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i 581 (647)
T PTZ00237 511 VSRSDDQIKISGNKVQLNTIETSILKH-P-----L--VLECCSIGIYDPD-CYNVPIGLLVLKQDQSNQSIDLNKLKNEI 581 (647)
T ss_pred EeccCCEEEECCEEeCHHHHHHHHHhC-C-----C--ceeeEEEeeEcCC-CCCEEEEEEEeccCccccCCCHHHHHHHH
Confidence 999999999999999999999999864 1 2 2333332 2211 11122345544321 11 00112222222
Q ss_pred HHhccChhhHHHhhcCCcCCeEEEEecc---chHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 007815 510 DRSFVDAGYVSARKVNAIGPLELRVVLK---GTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 576 (588)
Q Consensus 510 d~~L~n~~Y~~~R~~g~l~p~~v~~v~~---gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 576 (588)
.+.+ ..+-.....|-+|.+|+. -.=.+.++..+.+=....++..|.-+. |++.++.|++
T Consensus 582 ~~~~------~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~~~~~~~~~--~~~~~~~~~~ 643 (647)
T PTZ00237 582 NNII------TQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDSNYQLPDNVN--DSEIFYKIKE 643 (647)
T ss_pred HHHH------HhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCCCCCCCcccc--CHHHHHHHHH
Confidence 2221 001011234555666542 111112222222111234788899999 9999999865
No 18
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.49 E-value=4.6e-12 Score=142.16 Aligned_cols=131 Identities=19% Similarity=0.218 Sum_probs=92.2
Q ss_pred CCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC---CCcccceeeccCceEEEEEeCCCC
Q 007815 303 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 303 ~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
+|+ ++++||+ ....+++++.|+..++. .+||+||+.. .+...... ..+..|..+ | +.-+..++.+
T Consensus 292 ~lr---~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~-p-g~~v~Ivd~~-- 363 (534)
T COG0318 292 SLR---LVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGRPL-P-GVEVRIVDPD-- 363 (534)
T ss_pred ceE---EEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCcccccC-C-CcEEEEEeCC--
Confidence 488 8888884 56677888888656788 9999999854 32222221 122233322 2 2233333332
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+ . ++.+|+.|||+|.. +.||| ||+|||+++++. .+.+.|+||.+
T Consensus 364 --~-------~------~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~gR~k 424 (534)
T COG0318 364 --G-------G------EVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVGRLK 424 (534)
T ss_pred --C-------C------ccCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEeccc
Confidence 1 1 12238899999954 57776 599999998886 58999999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+|+.+||||++.+||+++.+.
T Consensus 425 d~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 425 DLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999975
No 19
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.48 E-value=2.9e-11 Score=138.18 Aligned_cols=133 Identities=9% Similarity=0.033 Sum_probs=90.0
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC-----CCCcccceeeccCceEEEEEe
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIP 371 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~-~~~~~-----~~~~~~~~~l~~~~~~~Efip 371 (588)
.++|+ .+.+||. ....+.+++.+ +++++ +.||+||....+ ...+. ...+..|..+ | +.-+.+++
T Consensus 353 l~~lr---~~~~gGe~l~~~~~~~~~~~~-~~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~-~-g~~v~i~d 425 (628)
T TIGR02316 353 LSSLH---WLFLAGEPLDEPTAHWITDGL-GKPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPM-Y-GYHLRVLD 425 (628)
T ss_pred cccee---EEEEecCCCCHHHHHHHHHHh-CCCEE-ecccccccCceeecCCCCCCcCCCCCCCcccCc-C-CceEEEEE
Confidence 46788 6666663 44556666677 47888 999999975322 11111 1112223322 2 23344444
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEccc------ccee-----------------ecccCCEEEEeceeCCC
Q 007815 372 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNST 428 (588)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~------~Gl~-----------------RYr~GDvv~v~~~~~~~ 428 (588)
.+ +++ ++..|+.|||+|+.- .|+| +|+|||+++.+. .
T Consensus 426 ~~-----------~g~-----~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----d 485 (628)
T TIGR02316 426 EA-----------TGR-----PCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----D 485 (628)
T ss_pred CC-----------CCC-----CCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----C
Confidence 32 122 456799999999753 3333 599999999885 6
Q ss_pred CEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 429 PELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 429 P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
..+.|+||.+|+|+++|++|++.|||++|.+.
T Consensus 486 G~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~ 517 (628)
T TIGR02316 486 GYTFILGRTDDVINVAGHRLGTREIEESVSSH 517 (628)
T ss_pred CcEEEEEcCcceEEeCCEEeCHHHHHHHHHhC
Confidence 78999999999999999999999999999753
No 20
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.48 E-value=9e-12 Score=139.59 Aligned_cols=133 Identities=8% Similarity=0.108 Sum_probs=92.8
Q ss_pred cCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC----CcccceeeccCceEEEEEeC
Q 007815 300 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP----PELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 300 lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~----~~~~~~~l~~~~~~~Efip~ 372 (588)
-.++++ ++.+|| .....+++++.+ +++++ +.||+||+.......+... ....|..+ + +.-++++++
T Consensus 310 ~~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~v~i~d~ 382 (547)
T PRK13295 310 PVSSLR---TFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGCPL-P-GVEVRVVDA 382 (547)
T ss_pred Ccccce---EEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCcccccc-C-CcEEEEECC
Confidence 356788 667666 366667777778 68999 9999999744221111110 11122221 2 234555543
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
+ . .++..|+.|||+|++ +.||| +|+|||+++++. .+.+.|.||.
T Consensus 383 ~------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~~----~g~l~~~gR~ 441 (547)
T PRK13295 383 D------------G-----APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARIDA----DGYIRISGRS 441 (547)
T ss_pred C------------C-----CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEcC----CceEEEEecc
Confidence 2 1 245679999999977 36665 499999999975 6789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+++++|++|++.+||++|.+.
T Consensus 442 ~~~i~~~G~~v~p~~IE~~l~~~ 464 (547)
T PRK13295 442 KDVIIRGGENIPVVEIEALLYRH 464 (547)
T ss_pred CCeEEECCEEECHHHHHHHHHhC
Confidence 99999999999999999999853
No 21
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.48 E-value=9.1e-12 Score=140.33 Aligned_cols=132 Identities=11% Similarity=0.082 Sum_probs=92.8
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCC--CCCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNP--SLPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+++|+ .+.+||. ....+.+++.+ +++++ +.||+||+.. .+...+ ...++..|..+ .+..+++++.+
T Consensus 322 ~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~--~g~~~~i~d~~- 393 (570)
T PRK04319 322 LSSLR---HILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGKPL--PGIEAAIVDDQ- 393 (570)
T ss_pred cccce---EEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcCCC--CCCEEEEECCC-
Confidence 46788 6676663 45556677777 58898 9999999743 221111 11122234322 23445555543
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc-----cccee-------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN-----VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt-----~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+ .++++|+.|||+|+. +.||| +|+|||+++++. ...+.|+||
T Consensus 394 ---~-------------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~----~g~l~~~GR 453 (570)
T PRK04319 394 ---G-------------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDE----DGYFWFQGR 453 (570)
T ss_pred ---C-------------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECC----CeeEEEEec
Confidence 1 145789999999974 24666 699999999985 678999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+|+|+++|++|++.+||+++.+.
T Consensus 454 ~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 454 VDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred CCCEEEECCEEECHHHHHHHHhhC
Confidence 999999999999999999999864
No 22
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.48 E-value=2.2e-11 Score=137.07 Aligned_cols=132 Identities=17% Similarity=0.252 Sum_probs=94.0
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCCcccceeeccCceEEEEEeCCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
.++++ +++.||. ....+.+++.+ +++++ +.||+||+...+...+. ..++..|..+ .+..+++++++
T Consensus 325 ~~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~~--~~~~v~i~d~~-- 395 (562)
T PRK05677 325 FSALK---LTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGIPV--PSTLCKVIDDD-- 395 (562)
T ss_pred hhhce---EEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCccC--CCCEEEEECCC--
Confidence 45788 7777773 55556677777 58999 99999997543322221 1122234322 33455555432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+ .++..|+.|||+|++ ..||| +|+|||+++++. .+.+.|.||.+
T Consensus 396 --~-------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~ 456 (562)
T PRK05677 396 --G-------------NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKK 456 (562)
T ss_pred --C-------------CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCc
Confidence 1 245789999999976 35555 599999999985 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|++++.|++|++.+||++|.+.
T Consensus 457 d~i~~~G~~i~p~eiE~~l~~~ 478 (562)
T PRK05677 457 DMILVSGFNVYPNELEDVLAAL 478 (562)
T ss_pred CeEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 23
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.47 E-value=1.8e-11 Score=135.04 Aligned_cols=133 Identities=17% Similarity=0.245 Sum_probs=89.5
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-------CCCCcccceeeccCceEEEE
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEF 369 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~-------~~~~~~~~~~l~~~~~~~Ef 369 (588)
-+|+++ .+..||. ....+++.+.+++++++ ..||+||+...+.... .+.....|..+ + +.-...
T Consensus 256 ~~~~l~---~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~-~-~~~~~i 329 (502)
T TIGR01734 256 NYPHLT---HFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGFAK-P-DMNLFI 329 (502)
T ss_pred cCCccc---EEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCcccccccc-C-CCEEEE
Confidence 456777 5555552 55566777778788998 9999999643322110 01111122211 2 222223
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------ecccCCEEEEeceeCCCC
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFHNSTP 429 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-----------------RYr~GDvv~v~~~~~~~P 429 (588)
++.+ + ..+.+|+.|||++++ ..||| +|+|||+++++. .
T Consensus 330 ~~~~------------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~- 387 (502)
T TIGR01734 330 MDEE------------G-----EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G- 387 (502)
T ss_pred ECCC------------C-----CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-
Confidence 3221 1 145679999999966 34554 799999999985 4
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 430 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 430 ~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 388 ~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 388 QLFYQGRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred EEEEeccccCeEEECcEEeCHHHHHHHHHcC
Confidence 9999999999999999999999999999864
No 24
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.47 E-value=1.7e-11 Score=135.28 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=94.6
Q ss_pred ccCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC--CCCCCcccceeeccCceEEEEEeCC
Q 007815 299 ELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 299 ~lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~--~~~~~~~~~~~l~~~~~~~Efip~~ 373 (588)
...++++ .+..||. ....+.+++.+ +++++ +.||+||+.+..... ..+..+..|. ...+..+.+++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~--~~~~~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVGF--PLPGVSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCccccc--CCCCcEEEEEECC
Confidence 3456788 6777763 44556677777 57888 999999975432211 1111111222 2234556666643
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+ .. .++.|+.|||+|++ ..||| +|+|||+++.+. ...+.|.||
T Consensus 339 --~---------~~-----~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR 398 (504)
T PRK07514 339 --T---------GA-----ELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGR 398 (504)
T ss_pred --C---------CC-----CCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEecc
Confidence 1 12 45679999999977 45666 499999999985 578999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+|+++++|++|++.+||+++.+.
T Consensus 399 ~~~~i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 399 GKDLIISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred ccceEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999999753
No 25
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.47 E-value=1.2e-11 Score=139.25 Aligned_cols=134 Identities=18% Similarity=0.238 Sum_probs=94.0
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+++++ .+..||. ....+.+++.+ +++++ +.||+||+...+...+. ..++..|.. .++ ..+++++.+
T Consensus 335 ~~~lr---~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~d~~- 406 (573)
T PRK05605 335 LSGVR---NAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGVP-FPD-TEVRIVDPE- 406 (573)
T ss_pred chhcc---EEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCccccC-CCC-CEEEEEcCC-
Confidence 45788 6677763 55556666667 58898 99999997533222111 112223332 233 456777654
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
.. + .++..|+.|||+|++ +.||| +|+|||++..+. ...+.|+||.+
T Consensus 407 -~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR~d 468 (573)
T PRK05605 407 -DP--------D-----ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDRIK 468 (573)
T ss_pred -CC--------C-----ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEeccc
Confidence 11 1 245679999999976 36666 699999999975 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++|++|++.+||+++...
T Consensus 469 d~i~~~G~~v~p~eIE~~l~~~ 490 (573)
T PRK05605 469 ELIITGGFNVYPAEVEEVLREH 490 (573)
T ss_pred cceeeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 26
>PLN02654 acetate-CoA ligase
Probab=99.46 E-value=4.4e-11 Score=137.72 Aligned_cols=226 Identities=12% Similarity=0.060 Sum_probs=131.1
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCC--CCeeccccccCcccce-ecCCCC---CCCcccceeeccCceEEEEEeC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGD--LPLMSADYGSSEGWIG-ANVNPS---LPPELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~--~~v~~~~YgaSEg~~~-~~~~~~---~~~~~~~~~l~~~~~~~Efip~ 372 (588)
++|+ .+.+||. ....+.+.+.+|+ +++. +.||+||+... +...+. ..++..|.. .++ .-+..++.
T Consensus 397 ~~Lr---~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p-~~g-~~v~i~d~ 470 (666)
T PLN02654 397 KSLR---VLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGSATFP-FFG-VQPVIVDE 470 (666)
T ss_pred hhee---EEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCccCCC-CCC-ceEEEECC
Confidence 5688 6666663 4444556666753 7888 99999996422 211111 112223332 222 22333332
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEcc-----cccee----------------ecccCCEEEEeceeCCCCEE
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN-----VAGLY----------------RYRLGDVVKVMGFHNSTPEL 431 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt-----~~Gl~----------------RYr~GDvv~v~~~~~~~P~i 431 (588)
+ +. +++.|+.|||+|+. +.||| +|+|||+++++. ...+
T Consensus 471 ~------------g~-----~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~----dG~l 529 (666)
T PLN02654 471 K------------GK-----EIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDK----DGYY 529 (666)
T ss_pred C------------CC-----CCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECC----CCcE
Confidence 1 22 34567789999975 23444 499999999985 6899
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEe--ecCCCCCceEEEEEEeccC--CCHHHHHHHHH
Q 007815 432 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH--VDLSTDPGHYVIFWEVSGE--VNDEVLKECCN 507 (588)
Q Consensus 432 ~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~--~~~~~~~~~y~~~vE~~~~--~~~~~l~~~~~ 507 (588)
.|+||.+|+|+++|++|++.|||++|.+. .+ +.+-.++ ++.. ..-.-..||.+..+ .+.+..+++.+
T Consensus 530 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaaVvg~~d~~-~ge~~~a~Vvl~~~~~~~~~l~~~l~~ 600 (666)
T PLN02654 530 WLTGRVDDVINVSGHRIGTAEVESALVSH------PQ--CAEAAVVGIEHEV-KGQGIYAFVTLVEGVPYSEELRKSLIL 600 (666)
T ss_pred EEeeeccCeEEeCCEEECHHHHHHHHHhC------CC--eeeEEEEeeEcCC-CCeEEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999864 22 3344433 2221 11123456655433 22222334444
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 007815 508 CLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 576 (588)
Q Consensus 508 ~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 576 (588)
.+.+.| .....|-.|.+|+ .|-..+-.=+.+..|. ..+++.+.-+. |++.++.+.+
T Consensus 601 ~~~~~L----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 662 (666)
T PLN02654 601 TVRNQI----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLA--DPGVVDQLIA 662 (666)
T ss_pred HHHHhC----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCccccc--CHHHHHHHHH
Confidence 444443 2234566677763 3332222212223442 23677788888 9999988764
No 27
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.46 E-value=1.4e-11 Score=142.55 Aligned_cols=133 Identities=15% Similarity=0.157 Sum_probs=93.9
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCCcccceeeccCceEEEEEeCCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
+++++ ++++||. ....+++.+.+++++++ +.||+||+........ ....+..|.. .+ +..+++++.+
T Consensus 259 ~~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~p-~~-~~~v~i~d~~-- 330 (705)
T PRK06060 259 FRSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGRV-LP-PYEIRVVAPD-- 330 (705)
T ss_pred cccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCccccc-CC-CcEEEEECCC--
Confidence 45788 7777773 55667788888778999 9999999753321111 1111122332 22 3345555432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------ecccCCEEEEeceeCCCCEEEEEeecCcee
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 441 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 441 (588)
+. ++.+|+.|||+|++ ..||| +|+|||+++.+. .+.+.|+||.+|++
T Consensus 331 ----------g~-----~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~i 391 (705)
T PRK06060 331 ----------GT-----TAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTE 391 (705)
T ss_pred ----------CC-----CCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceE
Confidence 12 35679999999976 35665 499999999875 67899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007815 442 TINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 442 ~~~Gekv~e~~v~~al~~~ 460 (588)
+++|++|++.+||.+|.+.
T Consensus 392 k~~G~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 392 VIGGVNVDPREVERLIIED 410 (705)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999864
No 28
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.45 E-value=2.4e-11 Score=136.30 Aligned_cols=131 Identities=15% Similarity=0.143 Sum_probs=91.6
Q ss_pred CCCceeeEEeecCc-HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCCCCcccceeeccCceEEEEEeCCCCCccc
Q 007815 302 PNAKYLSGIMTGSM-EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSLPPELATFAVLPNIGYFEFIPQRLGNLES 379 (588)
Q Consensus 302 P~L~~i~~~~~g~~-~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~ 379 (588)
++++ .+.+|+. ....+.+++.+ +++++ +.||+||+...+... +...++..|. ...+.-+++++.+ +
T Consensus 294 ~~l~---~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~--~~~~~~~~i~d~~----~- 361 (542)
T PRK06155 294 HRVR---VALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGR--LAPGFEARVVDEH----D- 361 (542)
T ss_pred CceE---EEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCc--cCCCceEEEECCC----C-
Confidence 4566 4455654 45556677778 58999 999999975433211 1122222332 2234455665432 1
Q ss_pred ccccCCCccccccccCCCCeEEEEEccc------ccee-------------ecccCCEEEEeceeCCCCEEEEEeecCce
Q 007815 380 QVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 440 (588)
Q Consensus 380 ~~~~~~~~~l~~~eve~G~~yELVvTt~------~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 440 (588)
.++..|+.|||+|++. .||| ||+|||+++++. .+.+.|+||.+|+
T Consensus 362 ------------~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~----dG~l~i~GR~~d~ 425 (542)
T PRK06155 362 ------------QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDA----DGWFRFVDRIKDA 425 (542)
T ss_pred ------------CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcC----CceEEEEecCCCE
Confidence 2567899999999763 4554 799999999975 6789999999999
Q ss_pred eeeeeeecCHHHHHHHHHHH
Q 007815 441 LTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 441 i~~~Gekv~e~~v~~al~~~ 460 (588)
++++|++|++.+||++|.+.
T Consensus 426 i~~~G~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 426 IRRRGENISSFEVEQVLLSH 445 (542)
T ss_pred EEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999763
No 29
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.44 E-value=3.6e-11 Score=134.23 Aligned_cols=133 Identities=17% Similarity=0.157 Sum_probs=91.8
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCCcccceeeccCceEEEEEeCCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
+++++ ++.+||. ....+++.+.+ +++++ +.||+||+.......+. ...+..|.. .+ +.-+..++++
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~-g~~~~i~d~~-- 374 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIP-TF-GVDARVIDPE-- 374 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCcc-cC-CeEEEEEeCC--
Confidence 46778 7777773 44556677777 58898 99999997543322211 111112222 12 2233444432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------ecccCCEEEEeceeCCCCEEEEEe
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGFHNSTPELKFIC 435 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-----------------RYr~GDvv~v~~~~~~~P~i~f~g 435 (588)
++ .+++.|+.|||+|.+ +.||| +|+|||+++++. ...+.++|
T Consensus 375 ---------~~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~G 436 (546)
T PRK08314 375 ---------TL-----EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITD 436 (546)
T ss_pred ---------CC-----cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEe
Confidence 11 255789999999965 35555 799999999985 57899999
Q ss_pred ecCceeeeeeeecCHHHHHHHHHHH
Q 007815 436 RRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 436 R~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|.+|+++++|++|++.+||.+|.+.
T Consensus 437 R~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 437 RLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred cchhhEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999864
No 30
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.44 E-value=2.1e-11 Score=136.28 Aligned_cols=191 Identities=13% Similarity=0.064 Sum_probs=115.7
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC--CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS--LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~-~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ +++.||. ....+.+++.+ +++++ +.||+||+.... ..... ..++..|+++ .+..++..+.+
T Consensus 312 ~~l~---~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~v~~~d-- 382 (541)
T TIGR03205 312 SSLA---TIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML--PGIELDVVSLD-- 382 (541)
T ss_pred cccc---eEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec--cCceeEEEecC--
Confidence 4677 7777773 44556677777 58998 999999974322 11111 1122244443 22334444433
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
+. . .++++|+.|||++++ +.||| ||+|||++++.. ...+.|+||.+|
T Consensus 383 ~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~~ 445 (541)
T TIGR03205 383 DP--------T-----KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKKD 445 (541)
T ss_pred CC--------C-----ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEccccC
Confidence 11 1 245679999999987 35555 699999999974 578999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhh
Q 007815 440 LLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGY 518 (588)
Q Consensus 440 ~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y 518 (588)
+++++|++|++.+||+++.+. .+ +.+..+..- ..........+++...+......+++.+.+.+.|
T Consensus 446 ~i~~~G~~i~~~eIE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l----- 512 (541)
T TIGR03205 446 MIISGGFNVYPQMIEQAIYEH------PG--VQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFSLDELRAFLAGKL----- 512 (541)
T ss_pred eEEECCEEECHHHHHHHHHhC------CC--eeeEEEEecCCcccCceEEEEEEECCCCCcCCHHHHHHHHHhhc-----
Confidence 999999999999999999863 12 335544321 1111234456677643311112233433444443
Q ss_pred HHHhhcCCcCCeEEEEec
Q 007815 519 VSARKVNAIGPLELRVVL 536 (588)
Q Consensus 519 ~~~R~~g~l~p~~v~~v~ 536 (588)
.....|-++++++
T Consensus 513 -----~~~~~P~~i~~~~ 525 (541)
T TIGR03205 513 -----GKHELPVAVEFVD 525 (541)
T ss_pred -----ccccCCcEEEEec
Confidence 1234666777764
No 31
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.44 E-value=4.1e-11 Score=133.71 Aligned_cols=111 Identities=18% Similarity=0.160 Sum_probs=79.0
Q ss_pred CCCeeccccccCcccceecCCCCCC-----CcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEE
Q 007815 328 DLPLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEI 402 (588)
Q Consensus 328 ~~~v~~~~YgaSEg~~~~~~~~~~~-----~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yEL 402 (588)
+++++ +.||+||+...+....... ....|.++. .+..+++++++ ++. .++.|+.|||
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~-----------~~~-----~~~~g~~Gel 380 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQ-----------DGA-----LLPDGESGEI 380 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCC-----------CCc-----CCCCCCeeEE
Confidence 58898 9999999854332221110 111233222 33456666653 112 4578999999
Q ss_pred EEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 403 IVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 403 VvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|++ +.||| +|+|||++++++ ...+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 381 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~ 451 (540)
T PRK06164 381 EIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEAL 451 (540)
T ss_pred EEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHhC
Confidence 9988 35554 699999999985 578999999999999999999999999999753
No 32
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.43 E-value=9.5e-11 Score=133.73 Aligned_cols=132 Identities=7% Similarity=0.042 Sum_probs=89.7
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCccccee-cCCCC-----CCCcccceeeccCceEEEEEeC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~-~~~~~-----~~~~~~~~~l~~~~~~~Efip~ 372 (588)
++|+ .+.+||. ....+.+++.+ +++++ +.||+||+...+ ...+. ...+..|.. .+ +.-+++++.
T Consensus 355 ~~lr---~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~i~d~ 427 (629)
T PRK10524 355 SSLR---ALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGVP-MY-GYNVKLLNE 427 (629)
T ss_pred hhee---EEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCcccC-cC-CceEEEEeC
Confidence 5678 6777773 45556677777 58999 999999975211 11111 111222332 12 223455554
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEccc------ccee-----------------ecccCCEEEEeceeCCCC
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNSTP 429 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~------~Gl~-----------------RYr~GDvv~v~~~~~~~P 429 (588)
+ +++ ++++|+.|||+|+.. .|+| +|+|||+++++. ..
T Consensus 428 ~-----------~g~-----~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----dG 487 (629)
T PRK10524 428 V-----------TGE-----PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDA----DG 487 (629)
T ss_pred C-----------CCC-----CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcC----CC
Confidence 2 122 457899999999763 2222 599999999874 67
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 430 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 430 ~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 488 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~ 518 (629)
T PRK10524 488 YYFILGRTDDVINVAGHRLGTREIEESISSH 518 (629)
T ss_pred cEEEEEEecCeEEeCCEEeCHHHHHHHHHhC
Confidence 8999999999999999999999999999853
No 33
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.43 E-value=8.2e-11 Score=135.03 Aligned_cols=227 Identities=14% Similarity=0.080 Sum_probs=131.0
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhC-CCCeeccccccCcccceecCC-CCC--CCcccceeeccCceEEEEEeCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g-~~~v~~~~YgaSEg~~~~~~~-~~~--~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
++|+ ++.+||. ....+.+.+.++ ++++. +.||+||....+... +.. .++..+.. .+ +.-+..++.+
T Consensus 383 ~sLr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~-g~~~~ivd~~- 455 (655)
T PRK03584 383 SALR---TIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQCR-GL-GMAVEAWDED- 455 (655)
T ss_pred hheE---EEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCCC-cC-CceeEEECCC-
Confidence 5677 7777763 455566666663 57888 999999963222111 111 11222221 12 2223333322
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc-----ccee------------------ecccCCEEEEeceeCCCCEE
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY------------------RYRLGDVVKVMGFHNSTPEL 431 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~-----~Gl~------------------RYr~GDvv~v~~~~~~~P~i 431 (588)
+. ++ +|+.|||+|+.. .||| .|+|||+++++. .+.+
T Consensus 456 -----------g~-----~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l 514 (655)
T PRK03584 456 -----------GR-----PV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITE----HGGV 514 (655)
T ss_pred -----------CC-----CC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECC----CCeE
Confidence 12 33 688999999752 3444 278999999975 6799
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEee-cCCCCCceEEEEEEeccC--CCHHHHHHHHHH
Q 007815 432 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHV-DLSTDPGHYVIFWEVSGE--VNDEVLKECCNC 508 (588)
Q Consensus 432 ~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~-~~~~~~~~y~~~vE~~~~--~~~~~l~~~~~~ 508 (588)
.|+||.+|+|+++|++|++.|||++|.+. .+ |.+-.++. +.......-+.||++..+ .+.+..+++.+.
T Consensus 515 ~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~ 586 (655)
T PRK03584 515 VIYGRSDATLNRGGVRIGTAEIYRQVEAL------PE--VLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTT 586 (655)
T ss_pred EEEeeccCeeecCcEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999853 22 23443332 111122344577877543 222223344444
Q ss_pred HHHhccChhhHHHhhcCCcCCeEEEEec------cchHHHHHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 007815 509 LDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 576 (588)
Q Consensus 509 ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 576 (588)
+.+.| .....|-.|.+|+ .|-..+..=+.+..|...+|...+.-+. |++.++.+.+
T Consensus 587 ~~~~L----------~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 648 (655)
T PRK03584 587 IRTNL----------SPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALA--NPEALDWFAD 648 (655)
T ss_pred HHhhC----------CCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCccccc--CHHHHHHHHH
Confidence 44443 1123466666664 2332221111223466666555667777 8888887754
No 34
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.43 E-value=2.3e-11 Score=133.97 Aligned_cols=128 Identities=15% Similarity=0.069 Sum_probs=91.9
Q ss_pred EEeecC--cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCCCCccccccc
Q 007815 309 GIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLGNLESQVLC 383 (588)
Q Consensus 309 ~~~~g~--~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~ 383 (588)
.+.+|+ .....+++.+.+++++++ +.||+||+.......... ..+..|..+ .+..+++++.+
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~---------- 324 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGRPF--HNVQVRICNEA---------- 324 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCccc--CCcEEEEECCC----------
Confidence 555565 355667788888888998 999999985433222111 122234432 33456666532
Q ss_pred CCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeee
Q 007815 384 IEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDK 447 (588)
Q Consensus 384 ~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gek 447 (588)
+ .++++|+.|||+|++ +.||| ||+|||++.++. .+.+.|+||.+|+++++|++
T Consensus 325 --g-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~----~g~l~i~GR~~d~i~~~G~~ 393 (487)
T PRK07638 325 --G-----EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE----EGFIYIVGREKNMILFGGIN 393 (487)
T ss_pred --C-----CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC----CCeEEEEecCCCeEEeCCEE
Confidence 1 245789999999976 35565 689999999885 68999999999999999999
Q ss_pred cCHHHHHHHHHHH
Q 007815 448 NTEKDLQLSVDEA 460 (588)
Q Consensus 448 v~e~~v~~al~~~ 460 (588)
|++.+||+++.+.
T Consensus 394 v~~~eiE~~l~~~ 406 (487)
T PRK07638 394 IFPEEIESVLHEH 406 (487)
T ss_pred ECHHHHHHHHHhC
Confidence 9999999999863
No 35
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.42 E-value=4.1e-11 Score=132.11 Aligned_cols=133 Identities=13% Similarity=0.104 Sum_probs=93.9
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CC-CCcccceeeccCceEEEEEeCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SL-PPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~---~~-~~~~~~~~l~~~~~~~Efip~~ 373 (588)
.++++ .+.+||. ....+.+.+.|++++++ +.||+||+........ .. ..+..|..+ .+.-++.++++
T Consensus 263 ~~~l~---~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~~~~ 336 (497)
T PRK06145 263 LDSLA---WCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRAL--AHVEIRIADGA 336 (497)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccCC--CCceEEEECCC
Confidence 35677 6677773 55667777788778899 9999999754221111 11 112233322 23344555432
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
. .++.+|+.|||++++ +.||| +|+|||+++.+. ...+.++||.
T Consensus 337 ------------~-----~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~ 395 (497)
T PRK06145 337 ------------G-----RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRK 395 (497)
T ss_pred ------------C-----CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccc
Confidence 1 145678999999976 46776 599999999985 6789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+++++|+++++.+||.+|.+.
T Consensus 396 ~~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 396 KDMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred cceEEeCCeEECHHHHHHHHHhC
Confidence 99999999999999999999864
No 36
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.42 E-value=3.2e-11 Score=132.81 Aligned_cols=132 Identities=12% Similarity=0.220 Sum_probs=88.8
Q ss_pred CCCCceeeEEeecCcHHHHHHHHHHh-CCCCeeccccccCcccce--ecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSMEHYLKKLRHYA-GDLPLMSADYGSSEGWIG--ANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~~~~~~~l~~~~-g~~~v~~~~YgaSEg~~~--~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.++++ .+.+||...-...+++++ .+++++ +.||+||+... ++..+. ..++..|. ...+..+++++.+
T Consensus 251 ~~~l~---~~~~gG~~~~~~~~~~~~~~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~--~~~~~~~~i~d~~- 323 (488)
T PRK09088 251 LRHLT---ALFTGGAPHAAEDILGWLDDGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGI--PTPTVQTRVVDDQ- 323 (488)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHhCCcee-eeecccccccccccCCCcccccccCCcccc--CCCCcEEEEECCC-
Confidence 35677 777777532222233322 158999 89999997432 221111 11222333 2234456665532
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
+. ++..|+.|||+|++ ..||+ +|+|||+++++. .+.+.|+||.
T Consensus 324 -----------~~-----~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~ 383 (488)
T PRK09088 324 -----------GN-----DCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRK 383 (488)
T ss_pred -----------CC-----CCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccc
Confidence 11 45679999999987 35555 499999999985 5789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~ 459 (588)
+|+++++|++|++.+||++|.+
T Consensus 384 ~d~i~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 384 KDMFISGGENVYPAEIEAVLAD 405 (488)
T ss_pred cceEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999875
No 37
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.41 E-value=2.6e-11 Score=147.04 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=95.0
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC-----------CCCcccceeeccCc
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS-----------LPPELATFAVLPNI 364 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~-----------~~~~~~~~~l~~~~ 364 (588)
-+++++ .+.+||. +...+++++.+ +++++ +.||+||+...+... +. +.++..|..+ | +
T Consensus 896 ~~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~-~-~ 968 (1146)
T PRK08633 896 MFASLR---LVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPL-P-G 968 (1146)
T ss_pred cCCCee---eEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCccccC-C-C
Confidence 356788 7777773 56667777778 58999 999999974322111 00 1122233322 2 3
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------ecccCCEEEEece
Q 007815 365 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------RYRLGDVVKVMGF 424 (588)
Q Consensus 365 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-----------------RYr~GDvv~v~~~ 424 (588)
.-++.++++ + . .++++|+.|||+|++ +.||| +|+|||+++.+.
T Consensus 969 ~~v~i~d~~--~---------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~- 1031 (1146)
T PRK08633 969 VAVRIVDPE--T---------F-----EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE- 1031 (1146)
T ss_pred CEEEEEcCC--C---------C-----ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC-
Confidence 345566543 1 1 256789999999976 35555 599999999985
Q ss_pred eCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 425 HNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 425 ~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 1032 ---~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1032 ---DGFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred ---CceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 689999999999999999999999999999864
No 38
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.41 E-value=4.4e-11 Score=132.74 Aligned_cols=131 Identities=14% Similarity=0.051 Sum_probs=83.0
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhC-CCCeeccccccCcccceecCC-CCC--CCcccceeeccCceEEEEEeCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g-~~~v~~~~YgaSEg~~~~~~~-~~~--~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
++|+ .+.+||. ....+.+++.++ ++++. +.||+||+...+... +.. ..+..|..+ ++ .-+.+++.+
T Consensus 236 ~~Lr---~i~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~-~~-~~~~ivd~~- 308 (499)
T PLN03051 236 SKLR---VFASTGEASAVDDVLWLSSVRGYYKPVI-EYCGGTELASGYISSTLLQPQAPGAFSTAS-LG-TRFVLLNDN- 308 (499)
T ss_pred hhhe---EEEecCCCCCHHHHHHHHHhccccceeE-eeeccccccceeecccccCCCCCccccCCC-CC-ceEEEECCC-
Confidence 5788 6666663 333344444332 37788 999999964322111 111 112233321 22 122233321
Q ss_pred CCcccccccCCCccccccccCCC--CeEEEEEccc-----ccee---------------------ecccCCEEEEeceeC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVG--EEYEIIVTNV-----AGLY---------------------RYRLGDVVKVMGFHN 426 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G--~~yELVvTt~-----~Gl~---------------------RYr~GDvv~v~~~~~ 426 (588)
+. ++++| +.|||+|... .||| +|+|||+++++.
T Consensus 309 -----------g~-----~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~--- 369 (499)
T PLN03051 309 -----------GV-----PYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTP--- 369 (499)
T ss_pred -----------CC-----CCCCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECC---
Confidence 12 44566 4799999542 2332 589999999985
Q ss_pred CCCEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 007815 427 STPELKFICRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 427 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
...+.|+||.+|+|+++|+||++.|||++|.+
T Consensus 370 -dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 370 -GGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred -CCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 67999999999999999999999999999985
No 39
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.41 E-value=2.9e-11 Score=135.40 Aligned_cols=132 Identities=16% Similarity=0.118 Sum_probs=92.7
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+++++ .++.||. ....+.+++.+| ++++ +.||+||+.......+. ..++..|..+ .+.-+++++.+
T Consensus 311 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~-~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~--~~~~~~i~d~~- 382 (537)
T PRK13382 311 GRSLR---FAAASGSRMRPDVVIAFMDQFG-DVIY-NNYNATEAGMIATATPADLRAAPDTAGRPA--EGTEIRILDQD- 382 (537)
T ss_pred cccee---EEEEcCCCCCHHHHHHHHHHcC-CcEE-ecccccccCcceecChhHhccCCCCccccC--cCcEEEEECCC-
Confidence 35688 6677763 566677777785 6888 99999997543221111 1111233321 33455666543
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee----------ecccCCEEEEeceeCCCCEEEEEeecCcee
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 441 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 441 (588)
. .+++.|+.|||+|++. .||+ +|+|||+++.+. ...+.|+||.+|++
T Consensus 383 -----------~-----~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i 442 (537)
T PRK13382 383 -----------F-----REVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMI 442 (537)
T ss_pred -----------C-----CCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEecccccee
Confidence 1 2456799999999773 4442 799999999985 57899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007815 442 TINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 442 ~~~Gekv~e~~v~~al~~~ 460 (588)
+++|++|++.+||.+|.+.
T Consensus 443 k~~G~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 443 VSGGENVYPIEVEKTLATH 461 (537)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 40
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.41 E-value=4e-11 Score=134.14 Aligned_cols=159 Identities=9% Similarity=0.032 Sum_probs=102.7
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-----CCcccceeeccCceEEEEEeC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-----PPELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~-----~~~~~~~~l~~~~~~~Efip~ 372 (588)
+++++ .++.||. ....+.+.+.+++.++. ..||+||+.........+ .....|.. . .+..++++++
T Consensus 316 ~~~lr---~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p-~-~~~~~~i~d~ 389 (558)
T PRK12583 316 LSSLR---TGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGRT-Q-PHLEVKVVDP 389 (558)
T ss_pred chhhe---EEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCcc-C-CCCeEEEECC
Confidence 46788 6566652 55556677777666788 999999975432111111 11123332 2 2345666654
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------ecccCCEEEEeceeCCCCEEEEEe
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 435 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~g 435 (588)
+ + .+++.|+.|||+|++. .||| +|+|||+++++. ...+.|.|
T Consensus 390 ~----~-------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~G 448 (558)
T PRK12583 390 D----G-------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVG 448 (558)
T ss_pred C----C-------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEe
Confidence 2 1 2567899999999663 4554 599999999875 57899999
Q ss_pred ecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeec-CCCCCceEEEEEEec
Q 007815 436 RRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVS 494 (588)
Q Consensus 436 R~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~-~~~~~~~y~~~vE~~ 494 (588)
|.+++++++|++|++.+||+++.+. .+ +.+..+... ........+.+++..
T Consensus 449 R~~~~i~~~G~~v~~~~IE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~ 500 (558)
T PRK12583 449 RSKDMIIRGGENIYPREIEEFLFTH------PA--VADVQVFGVPDEKYGEEIVAWVRLH 500 (558)
T ss_pred cccceeEECCEEeCHHHHHHHHHhC------CC--eeEEEEEeeecCCCCcEEEEEEEEC
Confidence 9999999999999999999999753 23 345554432 111223445677664
No 41
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.40 E-value=8.7e-11 Score=129.96 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=89.4
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
++++ .+..||. ....+.+++.+++++++ +.||+||+.. +....+. ...+..|..+ + +.-+..++.+
T Consensus 286 ~~l~---~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~~~~- 358 (523)
T PRK08316 286 SSLR---KGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRPV-L-NVETRVVDDD- 358 (523)
T ss_pred ccce---EEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCcccCC-C-CcEEEEEcCC-
Confidence 4567 5565652 55567778878778999 9999999643 3221111 1111123221 1 2223333321
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+. ++..|+.|||++++. .||| +|+|||+++.+. .+.+.|+||.+
T Consensus 359 -----------~~-----~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~ 418 (523)
T PRK08316 359 -----------GN-----DVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKK 418 (523)
T ss_pred -----------CC-----CCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccc
Confidence 12 456799999999773 5555 599999999985 67899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
++++++|++|++.+||+++.+.
T Consensus 419 ~~i~~~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 419 DMIKTGGENVASREVEEALYTH 440 (523)
T ss_pred cEEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 42
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.40 E-value=8.7e-11 Score=129.33 Aligned_cols=132 Identities=17% Similarity=0.222 Sum_probs=86.8
Q ss_pred CCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-------CCcccceeeccCceEEEEE
Q 007815 301 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-------PPELATFAVLPNIGYFEFI 370 (588)
Q Consensus 301 wP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~-------~~~~~~~~l~~~~~~~Efi 370 (588)
.++++ .+.+|| .....+.+.+.+++++++ +.||+||....+...+.+ .....|+. .++ .-...+
T Consensus 259 ~~~l~---~i~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~-~~~~i~ 332 (503)
T PRK04813 259 LPNLT---HFLFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGYA-KPD-SPLLII 332 (503)
T ss_pred CCCce---EEEEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCccccc-CCC-CEEEEE
Confidence 46788 555555 356667788888778888 999999964322111111 01011221 111 111122
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-----------------ecccCCEEEEeceeCCCCE
Q 007815 371 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 371 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-----------------RYr~GDvv~v~~~~~~~P~ 430 (588)
+.+ +. .+.+|+.|||+|++. .||| +|+|||++++ . ...
T Consensus 333 d~~------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~ 390 (503)
T PRK04813 333 DEE------------GT-----KLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGL 390 (503)
T ss_pred CCC------------CC-----CCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCe
Confidence 211 12 456788999999762 2222 6999999998 3 578
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.+.||.+|+++++|+++++.+||+++.+.
T Consensus 391 ~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 391 LFYQGRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred EEEeccccceEEECcEEeCHHHHHHHHHhC
Confidence 999999999999999999999999999864
No 43
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.40 E-value=3.1e-11 Score=134.78 Aligned_cols=135 Identities=13% Similarity=0.098 Sum_probs=93.9
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-------CCCCcccceeeccCceEEEE
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEF 369 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~-------~~~~~~~~~~l~~~~~~~Ef 369 (588)
-+++++ .+.+||. ...++.+++.+ +++++ +.||+||+...+...+ ..+....+.+-...+..+++
T Consensus 293 ~~~~lr---~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i 367 (534)
T PRK05852 293 KPAALR---FIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRI 367 (534)
T ss_pred cCCCee---EEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEE
Confidence 356788 6666663 55667788888 58998 8999999743221110 00111123321123445666
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEE
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKF 433 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f 433 (588)
++.+ + .++++|+.|||+|++. .||| +|+|||+++.+. ...+.|
T Consensus 368 ~d~~----g-------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~----dG~l~~ 426 (534)
T PRK05852 368 VGSD----G-------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSA----AGDLSI 426 (534)
T ss_pred ECCC----C-------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeC----CCcEEE
Confidence 6543 1 2457899999999773 5565 599999999985 578999
Q ss_pred EeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 434 ICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 434 ~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.||.+|+++++|++|++.+||+++.+.
T Consensus 427 ~gR~~d~i~~~G~~v~~~~iE~~l~~~ 453 (534)
T PRK05852 427 RGRIKELINRGGEKISPERVEGVLASH 453 (534)
T ss_pred EecchhhEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999999999753
No 44
>PLN02246 4-coumarate--CoA ligase
Probab=99.39 E-value=7.7e-11 Score=131.68 Aligned_cols=133 Identities=13% Similarity=0.116 Sum_probs=91.8
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----C---CCCcccceeeccCceEEEEEe
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----S---LPPELATFAVLPNIGYFEFIP 371 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~----~---~~~~~~~~~l~~~~~~~Efip 371 (588)
++++ .++.||. ....+.+++.++++++. +.||+||+...+.... . ..++..|..+ .+.-.++++
T Consensus 298 ~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d 371 (537)
T PLN02246 298 SSIR---MVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVV--RNAELKIVD 371 (537)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccccc--CCcEEEEec
Confidence 5677 6666663 55667777878778888 8999999753221100 0 0111223322 233445554
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEE
Q 007815 372 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFI 434 (588)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~ 434 (588)
++ . . .+++.|+.|||+|+. +.||| +|+|||+++++. ...+.|.
T Consensus 372 ~~--~---------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~ 431 (537)
T PLN02246 372 PE--T---------G-----ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIV 431 (537)
T ss_pred CC--C---------C-----CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEE
Confidence 32 1 1 246789999999976 35554 589999999985 5789999
Q ss_pred eecCceeeeeeeecCHHHHHHHHHHH
Q 007815 435 CRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 435 gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
||.+|+++++|++|++.+||+++.+.
T Consensus 432 GR~dd~i~~~G~~i~~~eIE~~l~~~ 457 (537)
T PLN02246 432 DRLKELIKYKGFQVAPAELEALLISH 457 (537)
T ss_pred ecccceEEECCEEECcHHHHHHHHhC
Confidence 99999999999999999999999853
No 45
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.39 E-value=1.2e-11 Score=141.88 Aligned_cols=135 Identities=14% Similarity=0.110 Sum_probs=90.9
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC-C-CCCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P-SLPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~-~~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++++ .+.+||+ ....+.+++.+ +++++ ++||+||+...+... + ....+..|..+ | +.-+.+++.+ +
T Consensus 376 ~~lr---~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~-p-g~~v~i~d~~--~ 446 (651)
T PLN02736 376 GRVR---FMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGSPN-P-ACEVKLVDVP--E 446 (651)
T ss_pred CcEE---EEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCCcc-C-ceEEEEEEcc--c
Confidence 3677 6677774 55556666667 48888 999999975433221 1 11222234322 2 3345555543 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
. .. ..+.+++..|||+|.+ +.||| ||+|||+++++. .+.+.|+||.+|
T Consensus 447 ~---------~~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~----dG~l~i~GR~kd 511 (651)
T PLN02736 447 M---------NY--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLP----GGRLKIIDRKKN 511 (651)
T ss_pred c---------Cc--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcC----CCcEEEEEechh
Confidence 1 00 0123445678999966 57777 699999999985 678999999999
Q ss_pred eeee-eeeecCHHHHHHHHHHH
Q 007815 440 LLTI-NIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 440 ~i~~-~Gekv~e~~v~~al~~~ 460 (588)
+|++ +|++|++.+||+++.+.
T Consensus 512 ~ik~~~G~~V~p~eIE~~l~~~ 533 (651)
T PLN02736 512 IFKLAQGEYIAPEKIENVYAKC 533 (651)
T ss_pred heEcCCCcEechHHHHHHHhcC
Confidence 9997 69999999999999863
No 46
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.39 E-value=8.5e-11 Score=131.23 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=54.7
Q ss_pred ccCCCCeEEEEEcc---cccee---------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 393 EVKVGEEYEIIVTN---VAGLY---------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 393 eve~G~~yELVvTt---~~Gl~---------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+++.|+.|||+|++ +.||| +|+|||+++.+ ...+.|+||.+|+|+++|++|++.+||++|.+.
T Consensus 366 ~~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 366 GVAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred cCCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 36789999999976 46776 69999999874 367999999999999999999999999999864
No 47
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.39 E-value=7.5e-11 Score=130.13 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=89.3
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCC-CeeccccccCcccceecCCC-CC--C--CcccceeeccCceEEEEEe
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDL-PLMSADYGSSEGWIGANVNP-SL--P--PELATFAVLPNIGYFEFIP 371 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~-~v~~~~YgaSEg~~~~~~~~-~~--~--~~~~~~~l~~~~~~~Efip 371 (588)
.++++ .+..||. ...++.+++.+| + +++ +.||+||+........ .. . ++..|.. . .+.-+++++
T Consensus 280 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~-~-~~~~~~i~d 352 (513)
T PRK07656 280 LSSLR---LAVTGAASMPVALLERFESELG-VDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIGTA-I-AGVENKIVN 352 (513)
T ss_pred cccee---eEEecCCCCCHHHHHHHHHHcC-CCceE-eEEccccCCCceeecCccccccccCCCcccc-C-CCcEEEEEC
Confidence 35677 6666662 555667777784 6 788 9999999843221111 10 0 1112222 2 233455554
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------ecccCCEEEEeceeCCCCEEEEE
Q 007815 372 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFI 434 (588)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~ 434 (588)
++ + ..++.|+.|||++++. .||| +|+|||+++.+. ...+.+.
T Consensus 353 ~~----~-------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~~~ 411 (513)
T PRK07656 353 EL----G-------------EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLYIV 411 (513)
T ss_pred CC----C-------------CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEEEE
Confidence 32 1 2457899999999874 3443 499999999975 6789999
Q ss_pred eecCceeeeeeeecCHHHHHHHHHH
Q 007815 435 CRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 435 gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
||.+|++++.|+++++.+||++|.+
T Consensus 412 GR~~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 412 DRKKDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred ecccceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999975
No 48
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.39 E-value=4e-11 Score=132.26 Aligned_cols=190 Identities=17% Similarity=0.088 Sum_probs=114.9
Q ss_pred cCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC-------CCcccceeeccCceEEE
Q 007815 300 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL-------PPELATFAVLPNIGYFE 368 (588)
Q Consensus 300 lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~~~-------~~~~~~~~l~~~~~~~E 368 (588)
.+++++ .+..|| ....++.+.+.+ +++++ +.||+||+.. +....... ..+..|.. .+ +..++
T Consensus 279 ~~~~l~---~v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~ 351 (521)
T PRK06187 279 DFSSLR---LVIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRP-LP-GVEAR 351 (521)
T ss_pred Ccchhh---EEEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCCccccc-cC-CeEEE
Confidence 456788 555555 255667777777 68999 9999999643 22111110 11112322 22 34556
Q ss_pred EEeCCCCCcccccccCCCccccccccCC--CCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCE
Q 007815 369 FIPQRLGNLESQVLCIEPKPVGLTEVKV--GEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 369 fip~~~~~~~~~~~~~~~~~l~~~eve~--G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~ 430 (588)
+++++ .. ++.. |+.|||+|++. .|++ +|+|||+++.+. .+.
T Consensus 352 i~~~~------------~~-----~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~ 410 (521)
T PRK06187 352 IVDDD------------GD-----ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGY 410 (521)
T ss_pred EECCC------------CC-----CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCC
Confidence 65543 11 3345 99999999884 4444 399999999975 578
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecC-CCCCceEEEEEEeccCCCHHHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDL-STDPGHYVIFWEVSGEVNDEVLKECCNCL 509 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~-~~~~~~y~~~vE~~~~~~~~~l~~~~~~l 509 (588)
+.+.||.+|+++++|+++++.+||+++.+. .+ +.+..++... ......-.++++...... ...+++.+.+
T Consensus 411 ~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~------~~--v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l 481 (521)
T PRK06187 411 LYITDRIKDVIISGGENIYPRELEDALYGH------PA--VAEVAVIGVPDEKWGERPVAVVVLKPGAT-LDAKELRAFL 481 (521)
T ss_pred EEEeecccceEEcCCeEECHHHHHHHHHhC------CC--ceEEEEEeccCCCcCceEEEEEEECCCCC-CCHHHHHHHH
Confidence 999999999999999999999999988753 23 3344443321 111234456676543211 1223344444
Q ss_pred HHhccChhhHHHhhcCCcCCeEEEEec
Q 007815 510 DRSFVDAGYVSARKVNAIGPLELRVVL 536 (588)
Q Consensus 510 d~~L~n~~Y~~~R~~g~l~p~~v~~v~ 536 (588)
.+.| .....|..+++|+
T Consensus 482 ~~~l----------~~~~~p~~i~~v~ 498 (521)
T PRK06187 482 RGRL----------AKFKLPKRIAFVD 498 (521)
T ss_pred HHhc----------cCCCCceEEEEcc
Confidence 4443 2234677777774
No 49
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.39 E-value=7.6e-12 Score=144.09 Aligned_cols=134 Identities=18% Similarity=0.222 Sum_probs=90.5
Q ss_pred CCCceeeEEeecCc--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~--~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++|+ .+.+||+ .....++.+.+++++++ ++||+||+...+... +. ...+..|..+ |+ .-+-+++++ +
T Consensus 386 ~~lr---~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~-pg-~evki~d~~--~ 457 (666)
T PLN02614 386 GNVR---IILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGPPV-PN-VDIRLESVP--E 457 (666)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccCcC-Cc-eEEEEeeec--c
Confidence 4677 5566764 33344555566668999 999999974322111 11 1123344432 32 223344432 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCce
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 440 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 440 (588)
. +. .++++|+.|||+|.. +.||| ||+|||+++++. .+.+.|+||.+|+
T Consensus 458 ~-------~~-----~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~gR~kd~ 521 (666)
T PLN02614 458 M-------EY-----DALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQP----NGSMKIIDRKKNI 521 (666)
T ss_pred c-------Cc-----ccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcC----CCCEEEEEcchhc
Confidence 1 11 245679999999965 57887 699999999985 6889999999999
Q ss_pred eee-eeeecCHHHHHHHHHH
Q 007815 441 LTI-NIDKNTEKDLQLSVDE 459 (588)
Q Consensus 441 i~~-~Gekv~e~~v~~al~~ 459 (588)
|++ +|++|++.+||+++.+
T Consensus 522 ik~~~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 522 FKLSQGEYVAVENIENIYGE 541 (666)
T ss_pred eecCCCeeecHHHHHHHHhc
Confidence 996 6999999999999975
No 50
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.38 E-value=1.4e-11 Score=138.77 Aligned_cols=148 Identities=15% Similarity=0.167 Sum_probs=88.4
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCC
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
..++++ .+++||. ....+++++.|++++++ +.||+||+...+......++..... ......+..... .
T Consensus 286 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~ 356 (563)
T PLN02860 286 VFPSVR---KILNGGGSLSSRLLPDAKKLFPNAKLF-SAYGMTEACSSLTFMTLHDPTLESP----KQTLQTVNQTKS-S 356 (563)
T ss_pred ccccee---EEEeCCCcCCHHHHHHHHHhcCCCcee-cCCCccccCcccccccccccccccc----hhhhhhhccccc-c
Confidence 346788 7777773 55667777888789999 9999999753221111000000000 000000000000 0
Q ss_pred ccccc-ccCCCcccc-----ccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEE
Q 007815 377 LESQV-LCIEPKPVG-----LTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKF 433 (588)
Q Consensus 377 ~~~~~-~~~~~~~l~-----~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f 433 (588)
..... ...-+.++. +...++|+.|||+|.+ +.||| +|+|||+++++. ...+.|
T Consensus 357 ~~~~~~~~~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~----dG~l~~ 432 (563)
T PLN02860 357 SVHQPQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDK----AGNLWL 432 (563)
T ss_pred cccccCCcccCCccCCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcC----CCCEEE
Confidence 00000 000011111 1111268999999976 46665 699999999975 688999
Q ss_pred EeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 434 ICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 434 ~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+||.+|+|+++|++|++.+||+++.+.
T Consensus 433 ~GR~~d~i~~~G~~v~p~eIE~~l~~~ 459 (563)
T PLN02860 433 IGRSNDRIKTGGENVYPEEVEAVLSQH 459 (563)
T ss_pred eecccceeEECCEEccHHHHHHHHHhC
Confidence 999999999999999999999999763
No 51
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.38 E-value=9.8e-11 Score=133.74 Aligned_cols=65 Identities=26% Similarity=0.289 Sum_probs=55.5
Q ss_pred ccCCCCeEEEEEcc---cccee-------------------------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 393 EVKVGEEYEIIVTN---VAGLY-------------------------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 393 eve~G~~yELVvTt---~~Gl~-------------------------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+++.|+.|||+|.. +.||| ||||||+++.. ...+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 56789999999966 35554 69999999884 47899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEAAQ 462 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~~~ 462 (588)
|+|+++|++|++.|||.+|.+..+
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~~p 510 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEATK 510 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhccc
Confidence 999999999999999999986433
No 52
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.38 E-value=1.1e-10 Score=130.61 Aligned_cols=131 Identities=12% Similarity=0.131 Sum_probs=92.9
Q ss_pred CCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCC---CCcccceeeccCceEEEEEeCCCC
Q 007815 303 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 303 ~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
+++ ++.+||. ...++.+.+.+++++++ +.||+||+.. +.....+. ..+..|..+ .+..+++++.+
T Consensus 291 ~lr---~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~-- 362 (542)
T PRK07786 291 ALR---VLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKVI--PTVAARVVDEN-- 362 (542)
T ss_pred ceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccccC--CCceEEEECCC--
Confidence 466 6666663 56677788888888999 9999999743 22111110 111123322 33456666543
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
. .++.+|+.|||++.+ ..||| ||+|||+++.+. ...+.++||.+|
T Consensus 363 --~-------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d 423 (542)
T PRK07786 363 --M-------------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKD 423 (542)
T ss_pred --C-------------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccc
Confidence 1 145679999999966 46666 499999999875 578999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 007815 440 LLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 440 ~i~~~Gekv~e~~v~~al~~~ 460 (588)
+++++|++|++.+||++|.+.
T Consensus 424 ~i~~~G~~v~~~eiE~~l~~~ 444 (542)
T PRK07786 424 MIISGGENIYCAEVENVLASH 444 (542)
T ss_pred eEEeCCEEECHHHHHHHHHhC
Confidence 999999999999999999753
No 53
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.38 E-value=7.4e-11 Score=130.88 Aligned_cols=133 Identities=13% Similarity=0.116 Sum_probs=94.3
Q ss_pred ccCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccce-ecCCCCCCCcccceeeccCceEEEEEeCCC
Q 007815 299 ELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSLPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 299 ~lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~-~~~~~~~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.-.++|| .+.+.|- ++..+.+.+.+| +++. +.||+||++.. +..-+...++..+.. .| +.-.+.++.+
T Consensus 287 ~dlssLr---~~~SaGEPLnpe~~~w~~~~~g-~~i~-d~~gqTEtg~~~~~~~~~~~~g~~g~p-~p-G~~~~vvdd~- 358 (528)
T COG0365 287 YDLSSLR---VLGSAGEPLNPEAFEWFYSALG-VWIL-DIYGQTETGMGFIAGRPPVKNGSSGLP-LP-GYAVRRVDDE- 358 (528)
T ss_pred ccchhhe---eeeccCCCCCHHHHHHHHHHhC-CCEe-ccccccccCccccCCCCCcCCCCCCCC-CC-CceeEEECCC-
Confidence 4556789 6677763 566666777884 9999 99999997622 211111122222332 23 3345655542
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc-----cceee-------------cccCCEEEEeceeCCCCEEEEEee
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLYR-------------YRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~-----~Gl~R-------------Yr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+ .++++|+ |+|+|... .|+|. |.|||.+..+. .+.+.|+||
T Consensus 359 ---g-------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~De----dGy~~i~GR 417 (528)
T COG0365 359 ---G-------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDE----DGYFWLHGR 417 (528)
T ss_pred ---C-------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEcc----CCCEEEEee
Confidence 2 2456788 99999753 34664 99999999996 799999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.||+||+.|..|+..|||++|.+.
T Consensus 418 ~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 418 SDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred ccceEeccCeeccHHHHHHHHHhC
Confidence 999999999999999999999875
No 54
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.37 E-value=1.4e-10 Score=129.70 Aligned_cols=132 Identities=11% Similarity=0.116 Sum_probs=90.6
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC----CCcccceeeccCceEEEEEeCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL----PPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~----~~~~~~~~l~~~~~~~Efip~~ 373 (588)
.|+++ .+.+||. ....+++++.+ +++++ +.||+||+.......+.. .....|.. .+ +.-+++++.+
T Consensus 309 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~-g~~v~i~~~~ 381 (538)
T TIGR03208 309 VPSLF---TFLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVTEPDDALEKASTTDGRP-LP-GVEVKVIDAN 381 (538)
T ss_pred CCcce---EEEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCccccCcccchhhccCccccc-CC-CCEEEEECCC
Confidence 36788 6666663 55556676667 58998 999999974322111111 01112332 22 2344554432
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEccc---ccee------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+ .+++.|+.|||+|++. .||| +|+|||+++.+. ...+.|+||.+
T Consensus 382 ------------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~ 440 (538)
T TIGR03208 382 ------------G-----AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQDA----EGYIRINGRSK 440 (538)
T ss_pred ------------C-----CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEECC----CCcEEEEeccC
Confidence 1 2456799999999773 5666 599999999975 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++|++|++.+||+++.+.
T Consensus 441 ~~i~~~G~~v~p~eIE~~l~~~ 462 (538)
T TIGR03208 441 DVIIRGGENIPVVEIENLLYQH 462 (538)
T ss_pred ceEEECCEEECHHHHHHHHhcC
Confidence 9999999999999999999753
No 55
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.36 E-value=3.8e-11 Score=134.26 Aligned_cols=133 Identities=14% Similarity=0.156 Sum_probs=91.7
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecC-CCC--CCCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPS--LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~-~~~--~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.++++ ++..||. ....+++.+.+ +++++ +.||+||+.+.... +.. ......|..+.|+ ..++.++.+
T Consensus 299 ~~~l~---~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~-~~v~i~d~~- 371 (536)
T PRK10946 299 LASLK---LLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPD-DEVWVADAD- 371 (536)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHhc-CCeEE-EeecccccceeeecCCCccccccccCCcccCCC-ceEEEECCC-
Confidence 46788 7777773 55556677777 58999 99999997544321 110 0011123322222 223333321
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
+ .++..|+.|||+|++ +.||| +|+|||+++.+. ...+.|.||.
T Consensus 372 -----------~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~ 431 (536)
T PRK10946 372 -----------G-----NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGRE 431 (536)
T ss_pred -----------C-----CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccc
Confidence 1 245689999999965 46666 599999999985 5789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+++++|++|++.+||.+|.+.
T Consensus 432 ~d~i~~~G~~v~~~eiE~~l~~~ 454 (536)
T PRK10946 432 KDQINRGGEKIAAEEIENLLLRH 454 (536)
T ss_pred cceeecCCEEEcHHHHHHHHHhC
Confidence 99999999999999999999753
No 56
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.36 E-value=2.7e-10 Score=127.50 Aligned_cols=130 Identities=14% Similarity=0.164 Sum_probs=87.6
Q ss_pred CCCceeeEEeecC-cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccc
Q 007815 302 PNAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 380 (588)
Q Consensus 302 P~L~~i~~~~~g~-~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~ 380 (588)
.+++ ++.+|. ..+...++.+.+ +++++ +.||+||+.+.+...+..+.+..|..+ ++ +++++.+ . +
T Consensus 267 ~~lr---~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~~~-~~---~~i~~~~--~-~-- 332 (529)
T PRK07867 267 NPLR---IVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGPLP-PG---VAIVDPD--T-G-- 332 (529)
T ss_pred cceE---EEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCCCC-CC---EEEEECC--C-C--
Confidence 3566 444343 344456667777 58999 999999975443322222222233322 22 6777643 1 1
Q ss_pred cccCCCccccccccCCCC------------eEEEEE-cc---cccee-------------ecccCCEEEEeceeCCCCEE
Q 007815 381 VLCIEPKPVGLTEVKVGE------------EYEIIV-TN---VAGLY-------------RYRLGDVVKVMGFHNSTPEL 431 (588)
Q Consensus 381 ~~~~~~~~l~~~eve~G~------------~yELVv-Tt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i 431 (588)
. ++.+|+ .|||++ .. +.||| ||+|||+++++. ...+
T Consensus 333 ------~-----~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l 397 (529)
T PRK07867 333 ------T-----ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYA 397 (529)
T ss_pred ------C-----CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcE
Confidence 1 123344 899998 44 46666 899999999875 5789
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 432 KFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 432 ~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.|+||.+|+|+++|+||++.+||++|.+.
T Consensus 398 ~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 426 (529)
T PRK07867 398 YFAGRLGDWMRVDGENLGTAPIERILLRY 426 (529)
T ss_pred EEeccccCeEEECCEEeCHHHHHHHHHhC
Confidence 99999999999999999999999999863
No 57
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.36 E-value=6.6e-12 Score=141.09 Aligned_cols=286 Identities=20% Similarity=0.259 Sum_probs=162.3
Q ss_pred CCCcceeeccccCCCCCcccccCChHHHHHHHHHHHHHHHHHhccCC-CCCC-ceEEEeecccc--ccc------CCCCe
Q 007815 98 GKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKG-KALQFIYGSKQ--SKT------KGGLN 167 (588)
Q Consensus 98 ~~pi~~f~~TSGTT~G~~K~iP~t~~~~~~~~~~~~~~~~~~~~~~p-~~~g-k~l~~~~~~~~--~~t------~~Gi~ 167 (588)
++.+.....||||| |.||=.=.|.+.+...... +.+..| +..+ +.|.++..+.. ... -+|..
T Consensus 190 ~dDlatiiYTSGTT-G~PKGVmLth~N~~~~v~~-------~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~ 261 (613)
T COG1022 190 PDDLATIIYTSGTT-GTPKGVMLTHRNLLAQVAG-------IDEVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVT 261 (613)
T ss_pred ccceEEEEEcCCCC-CCCceEEEehHHHHHHHHH-------HHhhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceE
Confidence 35566788899999 9999999887766433222 223343 5444 56666532221 111 12222
Q ss_pred EeccccccccCchhhhhhhhhhhccCCCcccccCCChHHHHHHHHHhcccccCCcceEeccchhHHHHHHHHHHHHH-HH
Q 007815 168 AGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVW-EE 246 (588)
Q Consensus 168 ~g~~S~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~d~~~~~Y~~Ll~aL~~~~~l~~i~~~f~~~ll~~~~~l~~~w-~~ 246 (588)
....++. ..++. ...--.|...+.++-.++..|.-..-.+.+...... .+|+....-- ..
T Consensus 262 ~~~~~~~----~~~~~-----dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~----------~if~~a~~~~~~~ 322 (613)
T COG1022 262 VLFKEDP----RTLLE-----DLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRR----------KLFRWALKVAYKK 322 (613)
T ss_pred EEecCCH----HHHHH-----HHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHH----------HHHHHHHHHHHHH
Confidence 2222110 11111 112234666666677777777776655543211100 0222222111 11
Q ss_pred HHHHHHhcccCCCCCchHHHHHhhccCCCCHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCcHHHHHHHHH--
Q 007815 247 LCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRH-- 324 (588)
Q Consensus 247 lv~dI~~g~~~~~~~~~~ir~~l~~~l~~~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~~~~~~~l~~-- 324 (588)
.-+.+..+....+. +..+-...+.|++.++. +++ ...+||++.-.+.+..
T Consensus 323 ~~~~~~~~~~~~~~------------~~~d~LVf~Kir~~lGg-------------ri~---~~~sGGa~l~~~~~~f~~ 374 (613)
T COG1022 323 ISRALLGGGPLSWL------------LVADRLVFRKIRDALGG-------------RIR---YALSGGAPLSPELLHFFR 374 (613)
T ss_pred HHhhhcccCCcchh------------hhhhHHHHHHHHHHhCC-------------cEE---EEEecCCcCCHHHHHHHH
Confidence 11112111111110 11333456666666541 467 6778876444333332
Q ss_pred HhCCCCeeccccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEE
Q 007815 325 YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIV 404 (588)
Q Consensus 325 ~~g~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVv 404 (588)
.. |+++. ++||+||...++.+++.. .|.+. ..+++++-.|++.++.|||.|
T Consensus 375 ~l-Gi~i~-eGYGlTEts~~~~v~~~~----------------~~~~g-----------tvG~p~p~~evKI~d~GEilV 425 (613)
T COG1022 375 SL-GIPIL-EGYGLTETSAVVSVNPPD----------------RFVLG-----------TVGKPLPGIEVKIADDGEILV 425 (613)
T ss_pred Hc-CCCeE-EEecccccccceEEcccc----------------CcccC-----------CcCCcCCCceEEEccCceEEE
Confidence 24 59999 999999986655443211 11111 124555556888888999999
Q ss_pred cc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCceeee-eeeecCHHHHHHHHHHHHHHhhh
Q 007815 405 TN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDEAAQLLAE 466 (588)
Q Consensus 405 Tt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~-~Gekv~e~~v~~al~~~~~~l~~ 466 (588)
.+ +.||| ||+|||++.++. ...+.++||+++++++ +|++|.+..||+.+.+.
T Consensus 426 RG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~------ 495 (613)
T COG1022 426 RGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKLSNGKNIAPEPIESKLAKS------ 495 (613)
T ss_pred ecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEECCCCcccChHHHHHHHhcC------
Confidence 77 69999 799999999996 5899999999999776 59999999999977642
Q ss_pred cCCeeEeeEEeec
Q 007815 467 EKQEVVDFTSHVD 479 (588)
Q Consensus 467 ~g~~l~~f~~~~~ 479 (588)
--|.+.+++.+
T Consensus 496 --~~I~qi~vvg~ 506 (613)
T COG1022 496 --PLIEQICVVGD 506 (613)
T ss_pred --CCeeEEEEEec
Confidence 22456666664
No 58
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.36 E-value=2.6e-10 Score=125.99 Aligned_cols=133 Identities=18% Similarity=0.243 Sum_probs=90.2
Q ss_pred CCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.++++ .+.+|| .....+.+++.+++++++ +.||+||+.......+.. .++..|..+ .+..+.+++.+
T Consensus 273 ~~~l~---~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~--~~~~~~i~~~~- 345 (515)
T TIGR03098 273 APSLR---YLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGKAI--PNAEVLVLRED- 345 (515)
T ss_pred ccceE---EEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcceec--CCCEEEEECCC-
Confidence 34677 566555 256667777878778888 999999975333222211 112233322 22344444432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------------------ecccCCEEEEeceeC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------------------RYRLGDVVKVMGFHN 426 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------------------RYr~GDvv~v~~~~~ 426 (588)
+. ++..|+.|||++.+ +.||| +|+|||++++..
T Consensus 346 -----------~~-----~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~--- 406 (515)
T TIGR03098 346 -----------GS-----ECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE--- 406 (515)
T ss_pred -----------CC-----CCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC---
Confidence 12 34568899999966 34444 488999999874
Q ss_pred CCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 427 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 427 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
...+.+.||.+|+++++|++|++.+||+++.+.
T Consensus 407 -~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~ 439 (515)
T TIGR03098 407 -EGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYAT 439 (515)
T ss_pred -CceEEEEeccccceecCCEEeCHHHHHHHHhcC
Confidence 568999999999999999999999999999753
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.36 E-value=2.7e-10 Score=128.20 Aligned_cols=130 Identities=16% Similarity=0.225 Sum_probs=89.9
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ .+.+||. ....+++++.+ +++++ +.||+||+.......+. ...+..|..+ + +.-+++++++
T Consensus 333 ~~lr---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~-~-~~~v~ivd~~-- 403 (562)
T PRK12492 333 SALK---LTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGIPV-P-GTALKVIDDD-- 403 (562)
T ss_pred ccee---EEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccceec-C-CCEEEEECCC--
Confidence 4677 5666663 55556677777 58999 99999997432211111 1112234322 2 2334444432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+. ++.+|+.|||+|++ +.||| +|+|||+++++. ...+.|+||.+
T Consensus 404 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~ 464 (562)
T PRK12492 404 ----------GN-----ELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKK 464 (562)
T ss_pred ----------CC-----CCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccC
Confidence 12 45679999999976 34555 599999999985 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~ 459 (588)
|++++.|++|++.+||.++.+
T Consensus 465 ~~i~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 465 DLIIVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred CeEEECCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 60
>PRK08315 AMP-binding domain protein; Validated
Probab=99.35 E-value=2.4e-10 Score=127.98 Aligned_cols=134 Identities=10% Similarity=0.052 Sum_probs=91.2
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC-----CCcccceeeccCceEEEEEeC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-----PPELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~-----~~~~~~~~l~~~~~~~Efip~ 372 (588)
.++++ +++.||. ....+.+.+.++..+++ +.||+||+.......... .....|..+ .+..++.+++
T Consensus 314 ~~~lr---~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~--~~~~v~i~d~ 387 (559)
T PRK08315 314 LSSLR---TGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGRAL--PHLEVKIVDP 387 (559)
T ss_pred chhhh---eeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCccC--CCcEEEEEcC
Confidence 36788 6666652 45556677777655688 999999985432211110 011123322 2345555554
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------ecccCCEEEEeceeCCCCEEEEEe
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 435 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~g 435 (588)
+ +++ ++..|+.|||+|.+. .||| +|+|||+++.+. ...+.|+|
T Consensus 388 ~-----------~~~-----~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~G 447 (559)
T PRK08315 388 E-----------TGE-----TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVG 447 (559)
T ss_pred c-----------cCC-----cCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEe
Confidence 3 122 456799999999663 4444 699999999874 57899999
Q ss_pred ecCceeeeeeeecCHHHHHHHHHHH
Q 007815 436 RRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 436 R~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|.++++++.|++|++.+||+++.+.
T Consensus 448 R~d~~i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 448 RIKDMIIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred eccceEEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999999853
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.35 E-value=1.1e-10 Score=129.86 Aligned_cols=133 Identities=16% Similarity=0.088 Sum_probs=88.8
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----------CCCCcccceeeccCceE
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----------SLPPELATFAVLPNIGY 366 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~----------~~~~~~~~~~l~~~~~~ 366 (588)
..++++ .+++||. .....++.+.+ +.++. +.||+||+...+...+ ....+..|..+ .+.-
T Consensus 278 ~~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~--~g~~ 350 (528)
T PRK07470 278 DHSSLR---YVIYAGAPMYRADQKRALAKL-GKVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFER--TGME 350 (528)
T ss_pred CCcceE---EEEEcCCCCCHHHHHHHHHHh-CcHHH-HhCCCcccCCceeecchhhccccccccceeeccCccc--CCcE
Confidence 356788 6666663 44455566667 46787 9999999643221111 00011122211 2223
Q ss_pred EEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCE
Q 007815 367 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 367 ~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~ 430 (588)
+++++.+ + .++..|+.|||+|++ ..||| +|+|||+++++. .+.
T Consensus 351 ~~i~d~~------------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~ 409 (528)
T PRK07470 351 VQIQDDE------------G-----RELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGF 409 (528)
T ss_pred EEEECCC------------C-----CCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCe
Confidence 4444432 1 245779999999976 35555 499999999885 678
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.+.||.+|++++.|++|++.+||++|.+.
T Consensus 410 l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~ 439 (528)
T PRK07470 410 LYITGRASDMYISGGSNVYPREIEEKLLTH 439 (528)
T ss_pred EEEeCCccceEEeCCEEECHHHHHHHHHhC
Confidence 999999999999999999999999999853
No 62
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.35 E-value=2.3e-10 Score=128.53 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=91.4
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
|+++ ++..||. ....+++++.+ |++++ +.||+||+...+..... ..++..|..+ .+.-+++++.+
T Consensus 325 ~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~~~~-- 395 (560)
T PRK08974 325 SSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLPV--PSTEIKLVDDD-- 395 (560)
T ss_pred ccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCccccCc--CCCEEEEECCC--
Confidence 5677 6677773 44455667767 58999 99999997543322111 1112233322 23445655532
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
+ .++..|+.|||++++ +.||| +|+|||+++.+. ...+.|+||.+|
T Consensus 396 ----------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d 456 (560)
T PRK08974 396 ----------G-----NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKD 456 (560)
T ss_pred ----------C-----CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccc
Confidence 1 245789999999976 35555 399999999874 578999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 007815 440 LLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 440 ~i~~~Gekv~e~~v~~al~~~ 460 (588)
++++.|+++++.+||++|.+.
T Consensus 457 ~i~~~G~~i~~~~IE~~l~~~ 477 (560)
T PRK08974 457 MILVSGFNVYPNEIEDVVMLH 477 (560)
T ss_pred eEEeCCEEECHHHHHHHHHhC
Confidence 999999999999999999753
No 63
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.35 E-value=1.4e-10 Score=128.83 Aligned_cols=132 Identities=15% Similarity=0.118 Sum_probs=92.1
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+|+++ .+++||. ...++++.+.+ +++++ +.||+||+.......+.. .++..|.. .+ +.-+++++.+
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~i~d~~- 362 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVGKP-VA-GCPVRILDRN- 362 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCcccCC-CC-CcEEEEECCC-
Confidence 46777 6677763 55667777878 47888 999999975432111111 11122322 12 3345555432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------ecccCCEEEEeceeCCCCEEEEEeecCcee
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 441 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~----------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 441 (588)
+ .++.+|+.|||+|++ +.||+ +|+|||+++.+. ...+.|+||.+|++
T Consensus 363 -----------~-----~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i 422 (516)
T PRK13383 363 -----------N-----RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMI 422 (516)
T ss_pred -----------C-----CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceE
Confidence 1 145679999999976 35566 788999999985 57899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007815 442 TINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 442 ~~~Gekv~e~~v~~al~~~ 460 (588)
+++|++|++.+||.+|.+.
T Consensus 423 ~~~G~~v~~~eiE~~l~~~ 441 (516)
T PRK13383 423 ISGGENVYPRAVENALAAH 441 (516)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 64
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.34 E-value=3e-10 Score=127.45 Aligned_cols=131 Identities=18% Similarity=0.178 Sum_probs=91.1
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ .+..||. ....+++++.+ +++++ +.||+||+...+..... ..++..|..+ .+.-+++++.+
T Consensus 327 ~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~--~g~~v~i~d~~-- 397 (557)
T PRK07059 327 SKLI---VANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGLPL--PSTEVSIRDDD-- 397 (557)
T ss_pred hhhe---EEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccCcc--CCcEEEEECCC--
Confidence 4566 6666663 45556677777 58999 99999997543322111 1122234322 34455665532
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+. .+.+|+.|||++++ +.||| +|+|||+++.+. ...+.|+||.+
T Consensus 398 ----------~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~ 458 (557)
T PRK07059 398 ----------GN-----DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKK 458 (557)
T ss_pred ----------CC-----CCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccc
Confidence 12 35679999999976 23443 599999999875 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++|++|++.+||+++.+.
T Consensus 459 ~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 459 DMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred cceEECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999753
No 65
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.34 E-value=9e-11 Score=130.69 Aligned_cols=134 Identities=13% Similarity=0.134 Sum_probs=97.6
Q ss_pred cCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCccc--ceecCCCCC-CCcccceeeccCceEEEEEeCC
Q 007815 300 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGW--IGANVNPSL-PPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 300 lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~--~~~~~~~~~-~~~~~~~~l~~~~~~~Efip~~ 373 (588)
=.|+++ .+.+|| ..+..+++++.+|...+. .+||+||.. +.++.+... .++.+|..+. + .+.+-.+
T Consensus 297 ~l~sl~---~v~~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~--g--~~~~v~~ 368 (537)
T KOG1176|consen 297 DLSSLR---SVLSGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRLLP--G--VRVKVLD 368 (537)
T ss_pred cCCccE---EEEecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCcccc--c--eEEEeeC
Confidence 346677 554444 366667788889756777 999999964 455555442 3555666542 2 2222222
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+. +. ++.+++.|||++.+ +.||| ||+|||++-++. ...+.|++|
T Consensus 369 --e~--------g~-----~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~----DG~l~IvdR 429 (537)
T KOG1176|consen 369 --ET--------GV-----SLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDE----DGYLYIVDR 429 (537)
T ss_pred --CC--------CC-----CCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcC----CCeEEEecc
Confidence 11 22 45678999999955 68888 799999998885 799999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+|+|+.+|++|++.|||++|.+.
T Consensus 430 ~KdlIk~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 430 SKDLIKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred hhhheeeCCEEeCHHHHHHHHHhC
Confidence 999999999999999999999864
No 66
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.34 E-value=2.6e-10 Score=127.18 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=90.8
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ ++++||. ....+++++.+ +++++ +.||+||+.+....-.. ...+..|..+.+ +...++++.+
T Consensus 299 ~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~-~~~v~i~d~~-- 370 (527)
T TIGR02275 299 SSLK---LLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSP-DDEVRVVDDH-- 370 (527)
T ss_pred cceE---EEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccCCCCccccccccCCCCCCC-CceEEEECCC--
Confidence 4677 7777773 55566677778 58998 99999997543211010 011123343222 2234444432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
++ .+++|+.|||++++ +.||| +|+|||+++++. .+.+.|+||.+
T Consensus 371 ----------g~-----~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~ 431 (527)
T TIGR02275 371 ----------GN-----PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAK 431 (527)
T ss_pred ----------CC-----CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEeccc
Confidence 12 34679999999965 45565 599999999975 67899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++|++|++.+||++|.+.
T Consensus 432 d~i~~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 432 DQINRGGEKIAAEEIENLLLAH 453 (527)
T ss_pred ceeecCCEEECHHHHHHHHHhC
Confidence 9999999999999999999853
No 67
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.34 E-value=1.2e-10 Score=143.44 Aligned_cols=131 Identities=16% Similarity=0.271 Sum_probs=90.2
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCC---------CcccceeeccCceEEEE
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---------PELATFAVLPNIGYFEF 369 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~---------~~~~~~~l~~~~~~~Ef 369 (588)
++++ .++.||. ....+++.+.+ +++++ +.||+||+.+.....+.++ ....|..+ ++. -+..
T Consensus 717 ~~lr---~i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~-~~~i 789 (1296)
T PRK10252 717 ASLR---QVFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPV-WNT-GLRI 789 (1296)
T ss_pred CCcc---EEEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccccc-CCC-EEEE
Confidence 5788 6666662 55556666666 58898 9999999755332221111 01123322 222 2223
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------------ecccCCEEEEeceeC
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------------RYRLGDVVKVMGFHN 426 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------------RYr~GDvv~v~~~~~ 426 (588)
++.+ . ..+++|+.|||+|+. ..||+ +|+|||+++...
T Consensus 790 ~d~~------------~-----~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~--- 849 (1296)
T PRK10252 790 LDAR------------M-----RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD--- 849 (1296)
T ss_pred ECCC------------C-----CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC---
Confidence 3321 1 245789999999977 34554 599999999985
Q ss_pred CCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 427 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 427 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.+.|+||.+++++++|++|...+||.+|.+.
T Consensus 850 -~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 850 -DGAVEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred -CCcEEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 689999999999999999999999999999864
No 68
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.33 E-value=5.6e-11 Score=137.57 Aligned_cols=134 Identities=13% Similarity=0.148 Sum_probs=89.0
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC-C-CCCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P-SLPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~-~~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++++ .+++||+ ....+.++..+ |++++ ++||+||+..+.... + ....+..|..+ .+.-+.+++++ +
T Consensus 420 ~~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~p~--p~~evkivd~~--~ 490 (696)
T PLN02387 420 GRIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGPPL--PCCYVKLVSWE--E 490 (696)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCCCC--CceEEEEeecc--c
Confidence 4678 7777774 33334444557 58999 999999975432221 1 11222334322 23345566543 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee------------------ecccCCEEEEeceeCCCCEEEEEe
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------RYRLGDVVKVMGFHNSTPELKFIC 435 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~------------------RYr~GDvv~v~~~~~~~P~i~f~g 435 (588)
.+ ..+.. .++..|||+|.. +.||| ||+|||+++++. .+.+.|+|
T Consensus 491 ~~--------~~~~~---~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~----dG~l~i~g 555 (696)
T PLN02387 491 GG--------YLISD---KPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHP----DGCLEIID 555 (696)
T ss_pred cC--------cccCC---CCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECC----CCcEEEEE
Confidence 11 11111 234568999966 57776 899999999985 68999999
Q ss_pred ecCceeee-eeeecCHHHHHHHHHH
Q 007815 436 RRNLLLTI-NIDKNTEKDLQLSVDE 459 (588)
Q Consensus 436 R~~d~i~~-~Gekv~e~~v~~al~~ 459 (588)
|.+|+|++ +||+|++.+||+++.+
T Consensus 556 R~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 556 RKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred cccceEECCCCeEEchHHHHHHHhc
Confidence 99999998 6999999999999875
No 69
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.33 E-value=4.1e-11 Score=137.88 Aligned_cols=133 Identities=11% Similarity=0.117 Sum_probs=86.0
Q ss_pred CCceeeEEeecCc--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCCcccceeeccCceEEEEEeCCCCCc
Q 007815 303 NAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGNL 377 (588)
Q Consensus 303 ~L~~i~~~~~g~~--~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~--~~~~~~~~~l~~~~~~~Efip~~~~~~ 377 (588)
+++ .+.+||+ ..-..++.+.++.++++ ++||+||+..++... +. ...+..|..+ | +.-+-+++.+ +.
T Consensus 384 ~lr---~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~-p-~~ev~i~d~~--~~ 455 (660)
T PLN02861 384 RVR---LLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGVPM-T-TIEARLESVP--EM 455 (660)
T ss_pred cEE---EEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccCcc-C-ceEEEEEEcc--cc
Confidence 577 6677774 22233444556545777 999999974322111 11 1122344432 2 2223334422 11
Q ss_pred ccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCcee
Q 007815 378 ESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 441 (588)
Q Consensus 378 ~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 441 (588)
+ . ..+.++..|||+|.. +.||| ||+|||+++++. .+.+.|+||.||+|
T Consensus 456 g--------~----~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~I 519 (660)
T PLN02861 456 G--------Y----DALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIF 519 (660)
T ss_pred C--------c----ccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccce
Confidence 1 0 122356678999965 57888 599999999985 68999999999999
Q ss_pred ee-eeeecCHHHHHHHHHH
Q 007815 442 TI-NIDKNTEKDLQLSVDE 459 (588)
Q Consensus 442 ~~-~Gekv~e~~v~~al~~ 459 (588)
++ +|++|++.+||+++.+
T Consensus 520 k~~~G~~I~p~eIE~~l~~ 538 (660)
T PLN02861 520 KLSQGEYVAVENLENTYSR 538 (660)
T ss_pred EcCCCeEEcHHHHHHHHhc
Confidence 97 7999999999999975
No 70
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.33 E-value=3.3e-10 Score=126.73 Aligned_cols=129 Identities=10% Similarity=0.048 Sum_probs=83.3
Q ss_pred ccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHH
Q 007815 393 EVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 456 (588)
Q Consensus 393 eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~a 456 (588)
.+++|+.|||++++ ..||| ||+|||+++.+. ...+.|+||.+|+++++|++|++.+||.+
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 45679999999976 34555 699999999974 57899999999999999999999999999
Q ss_pred HHHHHHHhhhcCCeeEeeEEe-e--cCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeEEE
Q 007815 457 VDEAAQLLAEEKQEVVDFTSH-V--DLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELR 533 (588)
Q Consensus 457 l~~~~~~l~~~g~~l~~f~~~-~--~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~v~ 533 (588)
|.+. + ++ .+.+++ . +.....-...+++|.....+...+.++...+.+.+ +..-...|-+|.
T Consensus 456 l~~~-~-----~v--~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l--------~~~~~~~p~~v~ 519 (545)
T PRK07768 456 AARV-E-----GV--RPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEV--------VAEVGVRPRNVV 519 (545)
T ss_pred HHhC-c-----cc--ccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHH--------HHHhCCCccEEE
Confidence 9874 2 22 122111 1 11111124566777643333333444444444332 111125677788
Q ss_pred EeccchHH
Q 007815 534 VVLKGTFQ 541 (588)
Q Consensus 534 ~v~~gtf~ 541 (588)
+++.+.|.
T Consensus 520 ~v~~~~lP 527 (545)
T PRK07768 520 VLGPGSIP 527 (545)
T ss_pred EeCCCcCC
Confidence 88877664
No 71
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.32 E-value=2.7e-10 Score=130.86 Aligned_cols=222 Identities=15% Similarity=0.124 Sum_probs=125.2
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhC-CCCeeccccccCcccceecC-CCCCC--CcccceeeccCceEEEEEeCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAG-DLPLMSADYGSSEGWIGANV-NPSLP--PELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g-~~~v~~~~YgaSEg~~~~~~-~~~~~--~~~~~~~l~~~~~~~Efip~~~ 374 (588)
++|+ .+.+||. ....+.+.+.++ ++.+. ..||+||....+.. .+..+ .+..+.. .++ +|..-.+
T Consensus 384 ~sLr---~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g---~~v~ivd- 454 (652)
T TIGR01217 384 SALQ---CVASTGSPLPPDGFRWVYDEIKADVWLA-SISGGTDICSCFAGANPTLPVHIGEIQAP-GLG---TAVQSWD- 454 (652)
T ss_pred hhee---EEEeecCCCCHHHHHHHHHHhCCCceEE-eccCHHHHhccccCCCCCCCCcCCccCCC-cCC---CceEEEC-
Confidence 5788 6777773 444455666664 34555 88999995322211 11111 1111111 121 2222222
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc-----ccee------------------ecccCCEEEEeceeCCCCEE
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY------------------RYRLGDVVKVMGFHNSTPEL 431 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~-----~Gl~------------------RYr~GDvv~v~~~~~~~P~i 431 (588)
++ +. ++ +|+.|||+++.. .||| +|+|||+++++. .+.+
T Consensus 455 -~~--------g~-----~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l 515 (652)
T TIGR01217 455 -PE--------GK-----PV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGI 515 (652)
T ss_pred -CC--------CC-----CC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcE
Confidence 11 22 33 489999999762 4554 278999999985 6889
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEe--ecCCCCCceEEEEEEeccC--CCHHHHHHHHH
Q 007815 432 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH--VDLSTDPGHYVIFWEVSGE--VNDEVLKECCN 507 (588)
Q Consensus 432 ~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~--~~~~~~~~~y~~~vE~~~~--~~~~~l~~~~~ 507 (588)
.|+||.||+|+++|++|++.|||++|.+. .+ +.+-.++ ++.. ..-.-+.||.+..+ .+.+..+++.+
T Consensus 516 ~i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaavvg~~~~~-~ge~~~afVv~~~~~~~~~~~~~~l~~ 586 (652)
T TIGR01217 516 VIHGRSDSTLNPQGVRMGSAEIYNAVERL------DE--VRESLCIGQEQPD-GGYRVVLFVHLAPGATLDDALLDRIKR 586 (652)
T ss_pred EEEecccCeEecCCEEcCHHHHHHHHHhC------CC--cceEEEEeeecCC-CCEEEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999864 22 2343332 2211 11233467766433 22222334444
Q ss_pred HHHHhccChhhHHHhhcCCcCCeEEEEec------cchHHH-HHHHHhcCCCCCCCCCCCcccCCCCHHHHHHHhc
Q 007815 508 CLDRSFVDAGYVSARKVNAIGPLELRVVL------KGTFQQ-ILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 576 (588)
Q Consensus 508 ~ld~~L~n~~Y~~~R~~g~l~p~~v~~v~------~gtf~~-~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 576 (588)
.+.+.| .....|-.|.+|+ .|-..+ ..+. +..|. .++.+--+. |++.++.+.+
T Consensus 587 ~~~~~l----------~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~-~~~~~---~~~~~~~~~--~~~~l~~~~~ 646 (652)
T TIGR01217 587 TIRAGL----------SPRHVPDEIIEVPGIPHTLTGKRVEVAVKR-VLQGT---PVDNPGAID--NPELLDLYEE 646 (652)
T ss_pred HHHhhC----------CCCcCCCEEEECCCCCCCCCccChHHHHHH-HHcCC---CCCCccccc--CHHHHHHHHH
Confidence 444443 2223566677764 232222 2221 23343 466677888 8999988865
No 72
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.32 E-value=2.9e-10 Score=127.39 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=89.5
Q ss_pred EEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCC-CCC-----CCcccceeeccCceEEEEEeCCCCCcc
Q 007815 309 GIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVN-PSL-----PPELATFAVLPNIGYFEFIPQRLGNLE 378 (588)
Q Consensus 309 ~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~-~~~-----~~~~~~~~l~~~~~~~Efip~~~~~~~ 378 (588)
.+.+||. ...++++++.|++++++ +.||+||+.+ ++... +.. .....|..+ + +.-+++++++ .
T Consensus 307 ~i~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~-~-~~~v~i~d~~--~-- 379 (546)
T PLN02330 307 AIMTAAAPLAPELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFIL-P-NLEVKFIDPD--T-- 379 (546)
T ss_pred eEEEcCCcCCHHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccccc-C-CcEEEEEeCC--C--
Confidence 5566663 56667788888789999 9999999743 32211 110 011123322 2 2235666543 1
Q ss_pred cccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCcee
Q 007815 379 SQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 441 (588)
Q Consensus 379 ~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i 441 (588)
. ..+++|+.|||+|++ +.||| +|+|||+++++. ...+.|.||.+|++
T Consensus 380 -------~-----~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d~i 443 (546)
T PLN02330 380 -------G-----RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKELI 443 (546)
T ss_pred -------C-----ccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHHhh
Confidence 1 245689999999975 35554 599999999985 57899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 007815 442 TINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 442 ~~~Gekv~e~~v~~al~~~ 460 (588)
+++|++|++.+||.++.+.
T Consensus 444 ~~~G~~v~~~~iE~~l~~~ 462 (546)
T PLN02330 444 KYKGFQVAPAELEAILLTH 462 (546)
T ss_pred hcCCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 73
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.32 E-value=9.9e-11 Score=131.39 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=90.9
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+++++ .+.+||. ....+++++.+ +++++ +.||+||+...+...+.. ..+..|.. ..+.-+.+++.+
T Consensus 328 l~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~--~~~~~v~i~d~~- 399 (560)
T PRK08751 328 FSSLK---MTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGLP--IPSTDACIKDDA- 399 (560)
T ss_pred hhhhe---eeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCcc--CCCceEEEECCC-
Confidence 45788 6676663 55556777777 58888 999999975433222111 11112322 223334444322
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee--------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
+. +++.|+.|||+|++. .||| +|+|||+++++. ...+.+.||.
T Consensus 400 -----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~ 459 (560)
T PRK08751 400 -----------GT-----VLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRK 459 (560)
T ss_pred -----------CC-----CCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeec
Confidence 12 456789999999773 4554 499999999875 6789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+++++|++|++.+||++|.+.
T Consensus 460 ~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 460 KDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred hhheeECCEEEcHHHHHHHHHhC
Confidence 99999999999999999999754
No 74
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.32 E-value=2.5e-10 Score=132.63 Aligned_cols=127 Identities=13% Similarity=0.136 Sum_probs=82.8
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CCCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~--~~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++|+ .+++||. ....+.+++.+ +++++ +.||+||+...+.... ...++..|..+ |+ .-...++.+
T Consensus 479 ~~lr---~i~~gg~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p~-pg-~~~~i~d~~--- 548 (718)
T PRK08043 479 ARLR---YVVAGAEKLQESTKQLWQDKF-GLRIL-EGYGVTECAPVVSINVPMAAKPGTVGRIL-PG-MDARLLSVP--- 548 (718)
T ss_pred cceE---EEEEeCccCCHHHHHHHHHHc-CCCee-cccCcccccceEEecCCcccCCCCCCCcC-CC-CeeEEecCC---
Confidence 5788 6677763 45556677778 58999 9999999743221111 11122234322 22 122233321
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------------ecccCCEEEEeceeCCCCE
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------------------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-----------------------RYr~GDvv~v~~~~~~~P~ 430 (588)
+ .|+.|||.+.. +.||| ||+|||+++++. .+.
T Consensus 549 -~-----------------~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~----dG~ 606 (718)
T PRK08043 549 -G-----------------IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDE----QGF 606 (718)
T ss_pred -C-----------------CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcC----CCc
Confidence 0 13446666633 22332 599999999985 678
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.|+||.+|+|+++|++|++.+||+++...
T Consensus 607 l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 607 VQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred EEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 999999999999999999999999998764
No 75
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.32 E-value=8.7e-11 Score=125.63 Aligned_cols=133 Identities=17% Similarity=0.223 Sum_probs=90.7
Q ss_pred CCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccceec---CCCCCC----CcccceeeccCceEEEEE
Q 007815 301 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN---VNPSLP----PELATFAVLPNIGYFEFI 370 (588)
Q Consensus 301 wP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~---~~~~~~----~~~~~~~l~~~~~~~Efi 370 (588)
.++++ .+..|| .....+.+++.++++++. ..||+||+...+. ...... ....|.. .+ +....++
T Consensus 233 ~~~l~---~v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~i~ 306 (408)
T TIGR01733 233 LASLR---LVILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGRP-LA-NTRLYVL 306 (408)
T ss_pred ccCce---EEEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCcc-cC-CceEEEE
Confidence 45788 556555 366667788888668898 9999999754221 111111 1112221 12 2223333
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee----------------------ecccCCEEEEecee
Q 007815 371 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------------------RYRLGDVVKVMGFH 425 (588)
Q Consensus 371 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~----------------------RYr~GDvv~v~~~~ 425 (588)
+++ . ..+..|+.|||+|++ +.||| +|+|||++.++.
T Consensus 307 ~~~------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~-- 367 (408)
T TIGR01733 307 DDD------------L-----RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP-- 367 (408)
T ss_pred CCC------------C-----CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC--
Confidence 321 1 245679999999987 34454 799999999985
Q ss_pred CCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 426 NSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 426 ~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
..++.|.||.+|+++++|+++++.+||+++...
T Consensus 368 --~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~ 400 (408)
T TIGR01733 368 --DGNLEFLGRIDDQVKIRGYRIELGEIEAALLRH 400 (408)
T ss_pred --CCCEEEeeccCCEEEeCeEEechHHHHHHHhcC
Confidence 568999999999999999999999999999753
No 76
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.31 E-value=4.1e-10 Score=123.89 Aligned_cols=131 Identities=12% Similarity=0.169 Sum_probs=89.0
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCC---CCCcccceeeccCceEEEEEeCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~ 373 (588)
+++++ .++.||. ....+.+++. ++++. +.||+||+.. ....... ...+..|..+ + +.-+++++++
T Consensus 263 ~~~lr---~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~-~-~~~~~i~d~~ 334 (496)
T PRK06839 263 LQSVR---WFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGKPV-L-FCDYELIDEN 334 (496)
T ss_pred Ccccc---eEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCcccC-C-CceEEEECCC
Confidence 45677 6666763 4555666654 58888 9999999753 2221111 1111223321 2 2334555443
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
+ . ++.+|+.|||+|++. .||| +|+|||+++.+. ...+.|.||.
T Consensus 335 ----~--------~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~ 393 (496)
T PRK06839 335 ----K--------N-----KVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRK 393 (496)
T ss_pred ----c--------C-----CCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccc
Confidence 1 1 357899999999774 4554 499999999975 5789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+++.+|++|++.+||+++.+.
T Consensus 394 ~d~i~~~G~~v~p~~iE~~l~~~ 416 (496)
T PRK06839 394 KEMIISGGENIYPLEVEQVINKL 416 (496)
T ss_pred cceEEECCEEECHHHHHHHHHhC
Confidence 99999999999999999999753
No 77
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.31 E-value=3.3e-11 Score=149.35 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=90.1
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC---CCCC-C---------cccceeeccC
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN---PSLP-P---------ELATFAVLPN 363 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~---~~~~-~---------~~~~~~l~~~ 363 (588)
.+|+|+ .++.||. .....++++++++++++ +.||+||+.+..... .... . ...|..+ ++
T Consensus 527 ~~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~ 601 (1389)
T TIGR03443 527 PIPSLH---HAFFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGM-KN 601 (1389)
T ss_pred cCCCcc---EEEEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEccccccccchhhcccCcCcCCCcc-CC
Confidence 357788 5555552 44556677777789999 999999985433211 0000 0 0011111 11
Q ss_pred ceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------------------
Q 007815 364 IGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------------------------- 411 (588)
Q Consensus 364 ~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~----------------------------- 411 (588)
. -+-+++.+ + .. ..+.+|+.|||+|.. ..|||
T Consensus 602 ~-~~~ivd~~----~------~~-----~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~ 665 (1389)
T TIGR03443 602 V-QLLVVNRN----D------RT-----QTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENN 665 (1389)
T ss_pred C-EEEEECCc----c------CC-----CcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccc
Confidence 1 11222221 0 01 245789999999966 35655
Q ss_pred -------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 412 -------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 412 -------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+|||+++... .+.+.|+||.||+|+++|++|.+.+||.+|.+.
T Consensus 666 ~~~~~~~~~~~~~~y~TGDlg~~~~----dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~ 723 (1389)
T TIGR03443 666 KPEREFWLGPRDRLYRTGDLGRYLP----DGNVECCGRADDQVKIRGFRIELGEIDTHLSQH 723 (1389)
T ss_pred cccccccCCCccceeecCCceeEcC----CCCEEEecccCCEEEeCcEEecHHHHHHHHHhC
Confidence 599999999885 688999999999999999999999999999863
No 78
>PRK12467 peptide synthase; Provisional
Probab=99.31 E-value=2.7e-11 Score=162.31 Aligned_cols=133 Identities=14% Similarity=0.141 Sum_probs=92.0
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---C----CCcccceeeccCceEEEEE
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---L----PPELATFAVLPNIGYFEFI 370 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~----~~~~~~~~l~~~~~~~Efi 370 (588)
.|+|+ .++.||. ....+++.+.++++.++ +.||+||+.+....... . .....|..+ ++. ++.
T Consensus 3350 ~~~lr---~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~~---~~~ 3421 (3956)
T PRK12467 3350 CASLD---IYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPV-AGR---SIY 3421 (3956)
T ss_pred CCCce---EEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCcccc-CCC---EEE
Confidence 46788 6777773 45556676677778888 99999998654322111 0 001123322 222 222
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------ecccCCEEEEeceeC
Q 007815 371 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHN 426 (588)
Q Consensus 371 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~ 426 (588)
-.+ +. . ..|++|+.|||+|.. ..||| +|||||+++...
T Consensus 3422 v~d--~~--------~-----~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~--- 3483 (3956)
T PRK12467 3422 VLD--GQ--------L-----NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRA--- 3483 (3956)
T ss_pred EEC--CC--------C-----CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecC---
Confidence 222 11 1 246789999999976 36665 399999999985
Q ss_pred CCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 427 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 427 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.++|+||.|++|+++|.+|...|||++|.+.
T Consensus 3484 -dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3484 -DGVIEYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred -CCcEEEeccccceEeeceEeecHHHHHHHHhhC
Confidence 689999999999999999999999999999863
No 79
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.31 E-value=4.5e-10 Score=123.42 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=88.2
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CCcccceeeccCceEEEEEeCCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~--~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
.++++ .+.+||. ....+++++.+ +++++ +.||+||+.+.+...... .++..|..+ + +.-+.+++.+
T Consensus 240 l~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~~-~-g~~~~i~d~~-- 310 (471)
T PRK07787 240 LRGAR---LLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGLPL-A-GVETRLVDED-- 310 (471)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCcccccC-C-CcEEEEECCC--
Confidence 35677 6677763 55567777778 57899 999999986533211111 111233322 2 2334444332
Q ss_pred CcccccccCCCccccccccCCCC-eEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGE-EYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~-~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
...+. ..|+ .|||++++ +.||| +|+|||++.++. ...+.++||.
T Consensus 311 ----------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~----dg~l~~~GR~ 372 (471)
T PRK07787 311 ----------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDP----DGMHRIVGRE 372 (471)
T ss_pred ----------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcC----CCCEEEeCCC
Confidence 12111 1343 79999976 35666 599999999974 6789999996
Q ss_pred -CceeeeeeeecCHHHHHHHHHH
Q 007815 438 -NLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 438 -~d~i~~~Gekv~e~~v~~al~~ 459 (588)
+++++++|+||++.+||++|..
T Consensus 373 ~d~~i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 373 STDLIKSGGYRIGAGEIETALLG 395 (471)
T ss_pred CceeEeeCCEEECHHHHHHHHHh
Confidence 8999999999999999999975
No 80
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.31 E-value=5.6e-10 Score=125.18 Aligned_cols=129 Identities=16% Similarity=0.151 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCcccc---cccCCCcccccc
Q 007815 316 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ---VLCIEPKPVGLT 392 (588)
Q Consensus 316 ~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~~---~~~~~~~~l~~~ 392 (588)
.....++.+.+ +++++ +.||+||+...+...+..+++..|..+ ++ +++++.+ ..... .-++++..+
T Consensus 277 ~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~--~~~~~~~~~~d~~g~~~--- 345 (540)
T PRK13388 277 PRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPE--TLTECAVARFDAHGALL--- 345 (540)
T ss_pred HHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCC--CCccccceeccCccccc---
Confidence 55556677777 58999 999999985433222222233345443 33 3444432 10000 000011111
Q ss_pred ccCCCCeEEEEEc-c---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHH
Q 007815 393 EVKVGEEYEIIVT-N---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 455 (588)
Q Consensus 393 eve~G~~yELVvT-t---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~ 455 (588)
...|+.|||+++ + +.||| +|+|||+++.+. ...+.|+||.+|+++++|++|++.+||+
T Consensus 346 -~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~G~~v~p~eIE~ 420 (540)
T PRK13388 346 -NADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVDGENLSAAPIER 420 (540)
T ss_pred -cCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEECCEEeCHHHHHH
Confidence 134678999997 4 35666 699999999985 5789999999999999999999999999
Q ss_pred HHHHH
Q 007815 456 SVDEA 460 (588)
Q Consensus 456 al~~~ 460 (588)
+|.+.
T Consensus 421 ~l~~~ 425 (540)
T PRK13388 421 ILLRH 425 (540)
T ss_pred HHHhC
Confidence 98753
No 81
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.30 E-value=1.2e-09 Score=121.11 Aligned_cols=130 Identities=13% Similarity=0.073 Sum_probs=91.5
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ .+++||. ....+++++.+ +++++ +.||+||+......... ..++..|..+ + +.-+++++.+
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~~i~d~~-- 341 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGKAA-P-GAELRFVDED-- 341 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCccC-C-CcEEEEECCC--
Confidence 5677 6676663 66677788888 57888 99999997542211111 1122234322 2 3345555532
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc----ccee-------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV----AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~----~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
. .++..|+.|||++++. .||+ +|+|||+++.+. ...+.|+||.+
T Consensus 342 ----------~-----~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~ 402 (509)
T PRK12406 342 ----------G-----RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKR 402 (509)
T ss_pred ----------C-----CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeeccc
Confidence 1 2457899999999763 2555 599999999985 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~ 459 (588)
|+++++|++|++.+||++|.+
T Consensus 403 d~ik~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 403 DMVISGGVNIYPAEIEAVLHA 423 (509)
T ss_pred ceEEECCEEECHHHHHHHHHh
Confidence 999999999999999999975
No 82
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.29 E-value=8.7e-10 Score=122.16 Aligned_cols=131 Identities=10% Similarity=0.020 Sum_probs=89.0
Q ss_pred CCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCC--CCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~--~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
.+++ .+..|| .....+.+++.+ +++++ +.||+||........... ..+..|.. . .+.-+++++.+
T Consensus 278 ~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~-~g~~v~i~d~~--- 347 (508)
T TIGR02262 278 VRLR---LCTSAGEALPAEVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGKP-V-PGYRLRLVGDG--- 347 (508)
T ss_pred ccce---eEEEcCCCCCHHHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcCCC-C-CCcEEEEECCC---
Confidence 3567 455555 255566777778 58998 999999974322111111 11112221 1 23335555522
Q ss_pred cccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEEeecCce
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 440 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 440 (588)
+. .+.+|+.|||++++. .||| +|+|||+++... ...+.|.||.+|+
T Consensus 348 ---------~~-----~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~gR~~d~ 409 (508)
T TIGR02262 348 ---------GQ-----DVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRND----DGSYTYAGRTDDM 409 (508)
T ss_pred ---------CC-----CCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcC----CccEEEeccccce
Confidence 12 456799999999863 5554 689999999874 5689999999999
Q ss_pred eeeeeeecCHHHHHHHHHHH
Q 007815 441 LTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 441 i~~~Gekv~e~~v~~al~~~ 460 (588)
+++.|+++++.+|++++.+.
T Consensus 410 i~~~G~~v~~~~ie~~l~~~ 429 (508)
T TIGR02262 410 LKVSGIYVSPFEIESALIQH 429 (508)
T ss_pred eeeCCEEECHHHHHHHHHhC
Confidence 99999999999999999763
No 83
>PRK12316 peptide synthase; Provisional
Probab=99.29 E-value=1.4e-10 Score=158.44 Aligned_cols=133 Identities=15% Similarity=0.146 Sum_probs=90.1
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC---CCCCCc----ccceeeccCceEEEEE
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN---PSLPPE----LATFAVLPNIGYFEFI 370 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~---~~~~~~----~~~~~l~~~~~~~Efi 370 (588)
.|+|+ +++.||. ....+++.+.++++.++ +.||+||+.+..... +..+.+ ..|..+ ++ .-.-.+
T Consensus 2260 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~-~~-~~~~i~ 2333 (5163)
T PRK12316 2260 PPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRAL-GN-RRAYIL 2333 (5163)
T ss_pred Cccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCccccc-CC-CEEEEE
Confidence 35788 7777773 44445555556678888 999999986532211 111110 123322 22 222222
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------ecccCCEEEEeceeC
Q 007815 371 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHN 426 (588)
Q Consensus 371 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~ 426 (588)
+.+ . ..|++|+.|||+|.. ..||| +|||||+++.+.
T Consensus 2334 d~~------------~-----~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~--- 2393 (5163)
T PRK12316 2334 DAD------------L-----NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRA--- 2393 (5163)
T ss_pred CCC------------C-----CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcC---
Confidence 221 1 246789999999965 35554 599999999985
Q ss_pred CCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 427 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 427 ~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.+.|+||.|++++++|++|.+.|||.+|.+.
T Consensus 2394 -dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2394 -DGVVEYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred -CCcEEEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 689999999999999999999999999999763
No 84
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.28 E-value=4.4e-10 Score=125.95 Aligned_cols=136 Identities=9% Similarity=0.017 Sum_probs=87.6
Q ss_pred CCCCceeeEEeecCcH---HHHHHHHHHhCCCCeeccccccCcccce-ecCCCCC------CCcccceeeccCceEEEEE
Q 007815 301 FPNAKYLSGIMTGSME---HYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSL------PPELATFAVLPNIGYFEFI 370 (588)
Q Consensus 301 wP~L~~i~~~~~g~~~---~~~~~l~~~~g~~~v~~~~YgaSEg~~~-~~~~~~~------~~~~~~~~l~~~~~~~Efi 370 (588)
.++++ .+.+||.. ...+ ..+.+ ++++. +.||+||+.+. +...... .++..|.. .++ .-+.++
T Consensus 285 ~~~lr---~~~~gG~~~~~~~~~-~~~~~-g~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~-~~g-~~v~i~ 356 (540)
T PRK05857 285 VPSLR---LVGYGGSRAIAADVR-FIEAT-GVRTA-QVYGLSETGCTALCLPTDDGSIVKIEAGAVGRP-YPG-VDVYLA 356 (540)
T ss_pred Cccce---EEEEcCccCCchhHH-HHHHh-CCeee-cccCCCcCCceeeecccccccccccccCCcCcc-cCC-cEEEEE
Confidence 56788 66666642 2223 22345 58998 99999997432 2111100 11223332 222 223333
Q ss_pred eCCCCCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEE
Q 007815 371 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFI 434 (588)
Q Consensus 371 p~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~ 434 (588)
+.+ + ...+....++.|+.|||+|++. .||| +|+|||+++.+. ...+.|+
T Consensus 357 d~~----~-------~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~----~g~l~~~ 421 (540)
T PRK05857 357 ATD----G-------IGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE----DGFFYIK 421 (540)
T ss_pred Ccc----c-------cCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC----CceEEEe
Confidence 322 1 1122223456789999999873 5666 699999999874 6789999
Q ss_pred eecCceeeeeeeecCHHHHHHHHHH
Q 007815 435 CRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 435 gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
||.+|+|+++|++|++.+||.++..
T Consensus 422 GR~~~~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 422 GRSSEMIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred ccccccEecCCEEECHHHHHHHHHh
Confidence 9999999999999999999999975
No 85
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.28 E-value=1.3e-09 Score=119.65 Aligned_cols=129 Identities=17% Similarity=0.187 Sum_probs=85.7
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccce-ecCCCC---CCCcccceeeccCceEEEEEeCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPS---LPPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~-~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
.+++ ++..||. ...++.+++ + +++++ +.||+||.... +...+. ...+..|..+ ++ .|+.-.+
T Consensus 254 ~~lr---~~~~~g~~~~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~-~~---~~~~i~~- 322 (483)
T PRK03640 254 SSFR---CMLLGGGPAPKPLLEQCKE-K-GIPVY-QSYGMTETASQIVTLSPEDALTKLGSAGKPL-FP---CELKIEK- 322 (483)
T ss_pred Ccce---EEEEcCCCCCHHHHHHHHH-h-CCCee-eeeccCcccccccccCcccccccCCCccccc-CC---cEEEEec-
Confidence 4678 6666663 334444544 4 58999 99999996432 211111 1112233321 22 2332222
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+ . .++++|+.|||+|++. .||+ +|+|||+++.+. .+.+.|.||.+
T Consensus 323 -~---------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~ 383 (483)
T PRK03640 323 -D---------G-----VVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRS 383 (483)
T ss_pred -C---------C-----CcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeeccc
Confidence 1 1 2457899999999873 4554 699999999985 57899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++|++|++.+||+++.+.
T Consensus 384 ~~i~~~G~~v~~~~ie~~i~~~ 405 (483)
T PRK03640 384 DLIISGGENIYPAEIEEVLLSH 405 (483)
T ss_pred CeEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 86
>PRK12467 peptide synthase; Provisional
Probab=99.28 E-value=1.9e-10 Score=154.46 Aligned_cols=132 Identities=16% Similarity=0.219 Sum_probs=90.1
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCCC---cccceeeccCceEEEEEeC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLPP---ELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~---~~~~---~~~~~~l~~~~~~~Efip~ 372 (588)
++++ .++.||. ....+++.+.+++++++ +.||+||+.+.+.... .... ...|.. .++. -+..++.
T Consensus 771 ~~lr---~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~-~~~i~d~ 844 (3956)
T PRK12467 771 RPQR---ALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQP-LANL-GLYILDH 844 (3956)
T ss_pred Cccc---EEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccCC-cCCC-EEEEECC
Confidence 4567 6666663 45556666666678999 9999999865332211 1100 012222 2232 2333332
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------ecccCCEEEEeceeCCC
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNST 428 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~~~ 428 (588)
+ . ..|++|+.|||+|+. ..||| +|||||+++.+. .
T Consensus 845 ~------------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~----d 903 (3956)
T PRK12467 845 Y------------L-----NPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRA----D 903 (3956)
T ss_pred C------------C-----CCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcC----C
Confidence 1 1 246789999999976 35554 599999999975 6
Q ss_pred CEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 429 PELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 429 P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.+.|+||.|++++++|++|.+.+||.+|.+.
T Consensus 904 G~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~ 935 (3956)
T PRK12467 904 GVIEYLGRMDHQVKIRGFRIELGEIEARLLAQ 935 (3956)
T ss_pred CcEEEeccccCeEEECCEecCHHHHHHHHHhC
Confidence 88999999999999999999999999999763
No 87
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.28 E-value=1.1e-09 Score=124.35 Aligned_cols=143 Identities=13% Similarity=0.069 Sum_probs=87.3
Q ss_pred CCCCceeeEEeecC-cHHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCCcccceeecc---CceEEEEEeCCCCC
Q 007815 301 FPNAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLP---NIGYFEFIPQRLGN 376 (588)
Q Consensus 301 wP~L~~i~~~~~g~-~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~---~~~~~Efip~~~~~ 376 (588)
.++++ ++.+++ .....+++.+.+|...++ +.||+||+.+.+.. ....++..|..... ...+..+-+ +
T Consensus 313 ~~~l~---~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~--- 383 (600)
T PRK08279 313 DHRLR---LMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDV-D--- 383 (600)
T ss_pred Cccee---EEecCCCCHHHHHHHHHHhCcceee-eeecccccceeecc-cCCCCcccccccccccccceeeeecc-C---
Confidence 35666 444444 355667777888644577 99999998654321 11112223332110 122222211 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEc--c---ccce-------------------eecccCCEEEEeceeCCCCEEE
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVT--N---VAGL-------------------YRYRLGDVVKVMGFHNSTPELK 432 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvT--t---~~Gl-------------------~RYr~GDvv~v~~~~~~~P~i~ 432 (588)
.+.... ...-.+.++++|+.|||++. . +.|| -+|+|||+++++. ...+.
T Consensus 384 ~~~~i~---~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~ 456 (600)
T PRK08279 384 TGEPVR---DADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQ 456 (600)
T ss_pred cCceee---CCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEE
Confidence 000000 00011235688999999842 2 2333 2699999999985 57899
Q ss_pred EEeecCceeeeeeeecCHHHHHHHHHH
Q 007815 433 FICRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 433 f~gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
|.||.+|+++++|++|++.+||++|.+
T Consensus 457 ~~GR~~d~ik~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 457 FVDRLGDTFRWKGENVATTEVENALSG 483 (600)
T ss_pred EecccCCeEEECCcccCHHHHHHHHhc
Confidence 999999999999999999999999986
No 88
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.27 E-value=6e-10 Score=123.94 Aligned_cols=131 Identities=15% Similarity=0.103 Sum_probs=87.9
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC-C-------CCcccceeeccCceEEEE
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-L-------PPELATFAVLPNIGYFEF 369 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~-~-------~~~~~~~~l~~~~~~~Ef 369 (588)
.++++ .+..||. ......+.+.++ +++. +.||+||+..++..... . .....|..+ + +.-+++
T Consensus 280 l~~lr---~~~~gg~~~~~~~~~~~~~~~~-~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~-~-g~~v~i 352 (524)
T PRK06188 280 LSSLE---TVYYGASPMSPVRLAEAIERFG-PIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPT-P-GLRVAL 352 (524)
T ss_pred Cccee---EEEEcCCCCCHHHHHHHHHHhC-chhh-heeCccccCCceeecCchhccccccccCCcccccc-C-CcEEEE
Confidence 45788 5565652 334455556674 6776 89999998433322111 0 011122221 2 334555
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEE
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKF 433 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f 433 (588)
++++ . .++..|+.|||++++ +.||| ||+|||+++.+. ...+.|
T Consensus 353 ~~~~------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~ 411 (524)
T PRK06188 353 LDED------------G-----REVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYI 411 (524)
T ss_pred EcCC------------C-----CCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEE
Confidence 5432 1 245789999999987 35555 699999999985 578999
Q ss_pred EeecCceeeeeeeecCHHHHHHHHHH
Q 007815 434 ICRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 434 ~gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
.||.+++++++|+++++.+||.++..
T Consensus 412 ~GR~~~~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 412 VDRKKDMIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred EeccccceecCCEEECHHHHHHHHHh
Confidence 99999999999999999999999875
No 89
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.27 E-value=3.1e-10 Score=127.58 Aligned_cols=132 Identities=16% Similarity=0.129 Sum_probs=91.1
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC---CCCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SLPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~---~~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ .+.+||. ....+.+++.+ +++++ +.||+||+........ ...++..|. ..++ .-+++++++
T Consensus 323 ~~lr---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~-- 393 (563)
T PRK06710 323 SSIR---ACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSIGV-PWPD-TEAMIMSLE-- 393 (563)
T ss_pred hhhh---heeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCccCC-CCCC-CeEEEEECC--
Confidence 5677 5566652 55556677777 58898 9999999753221111 111122233 2333 335556543
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
. . ..+.+|+.|||++++. .||| +|+|||++..+. ...+.+.||.+|
T Consensus 394 ~---------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd 455 (563)
T PRK06710 394 T---------G-----EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKD 455 (563)
T ss_pred C---------C-----ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeecccc
Confidence 1 1 2457799999999773 5565 399999999875 678999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 007815 440 LLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 440 ~i~~~Gekv~e~~v~~al~~~ 460 (588)
+++++|++|++.+||+++.+.
T Consensus 456 ~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 456 MIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred EEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999764
No 90
>PRK12316 peptide synthase; Provisional
Probab=99.27 E-value=1.5e-10 Score=158.14 Aligned_cols=133 Identities=14% Similarity=0.112 Sum_probs=91.1
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----CCCCcccceeeccCceEEEEEeCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----SLPPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~----~~~~~~~~~~l~~~~~~~Efip~~ 373 (588)
.++++ .++.||. ....+++.+.+++++++ +.||+||+.+.+.... .......|..+ ++. -+..++.+
T Consensus 769 ~~~l~---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~-~~~-~~~i~d~~ 842 (5163)
T PRK12316 769 CTSLR---RIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGRPI-ANL-ACYILDAN 842 (5163)
T ss_pred CCCcc---EEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCcccc-CCC-EEEEECCC
Confidence 46788 5666663 44555565556678999 9999999864332111 11111123322 222 22333322
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------------ecccCCEEEEeceeCCCCE
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------------RYr~GDvv~v~~~~~~~P~ 430 (588)
. ..++.|+.|||+|.. ..||+ +|+|||+++... .+.
T Consensus 843 ------------~-----~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----dG~ 901 (5163)
T PRK12316 843 ------------L-----EPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRA----DGV 901 (5163)
T ss_pred ------------C-----CCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECC----CCC
Confidence 1 245789999999965 35555 699999999985 689
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.|+||.|++++++|++|.+.|||++|.+.
T Consensus 902 l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~ 931 (5163)
T PRK12316 902 IEYAGRIDHQVKLRGLRIELGEIEARLLEH 931 (5163)
T ss_pred EEeecccCCEEEEceEEcChHHHHHHHHhC
Confidence 999999999999999999999999999863
No 91
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.27 E-value=4.3e-10 Score=128.15 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=78.7
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHH----hC-CCCeeccccccCcccceecCC--CCCCCcccceeeccCceEEEE
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHY----AG-DLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEF 369 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~----~g-~~~v~~~~YgaSEg~~~~~~~--~~~~~~~~~~~l~~~~~~~Ef 369 (588)
.+++|+ .+++||. ....+++++. +| +++++ +.||+||+...+... +...++..|..+ |+ .|+
T Consensus 332 ~~~~lr---~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p~-pg---~~v 403 (614)
T PRK08180 332 FFSRLK---LLFYAGAALSQDVWDRLDRVAEATCGERIRMM-TGLGMTETAPSATFTTGPLSRAGNIGLPA-PG---CEV 403 (614)
T ss_pred hcccee---EEEEccCCCCHHHHHHHHHHHHhhcCCCceee-eeecccccCCceEecccccCCCCcccCcc-CC---cEE
Confidence 457888 7777774 4455556553 43 37788 999999975322111 111122223211 11 122
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEE
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELK 432 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~ 432 (588)
... .+|..|||+|.+ +.||| +|+|||++++++-......+.
T Consensus 404 ~i~----------------------d~~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~ 461 (614)
T PRK08180 404 KLV----------------------PVGGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLM 461 (614)
T ss_pred EEe----------------------cCCCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceE
Confidence 111 124567999854 46666 699999999953111245789
Q ss_pred EEeecCceeee-eeeecC--HHHHHHHHHH
Q 007815 433 FICRRNLLLTI-NIDKNT--EKDLQLSVDE 459 (588)
Q Consensus 433 f~gR~~d~i~~-~Gekv~--e~~v~~al~~ 459 (588)
|+||.+|++++ +|++++ +.|++.++.+
T Consensus 462 i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~ 491 (614)
T PRK08180 462 FDGRIAEDFKLSSGTWVSVGPLRARAVSAG 491 (614)
T ss_pred EecchhhhEEcCCCcEecchhhhHHHHhhc
Confidence 99999988874 698766 7788887754
No 92
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.27 E-value=2.2e-10 Score=133.25 Aligned_cols=132 Identities=17% Similarity=0.212 Sum_probs=88.2
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC-C-CCCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P-SLPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~-~~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++|+ .+.+||+ ....+.++..+ |+++. ++||+||+...+... + ....+..|..+.|+ +|+.-.+ .
T Consensus 461 ~~lr---~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg---~e~ki~d--~ 530 (746)
T PTZ00342 461 PNLE---VILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN---TKYKVRT--W 530 (746)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc---EEEEEec--c
Confidence 6788 7777774 45555666667 58998 999999974322211 1 11223344432232 3443322 0
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
++ .. ....+..|||+|.. +.||| ||+|||+++++. .+.+.|+||.+|
T Consensus 531 ~~-------~~-----~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~----dG~l~i~gR~kd 594 (746)
T PTZ00342 531 ET-------YK-----ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINK----NGSLTFLDRSKG 594 (746)
T ss_pred cc-------cc-----cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECC----CCeEEEEccCCC
Confidence 00 00 11234568999955 57887 699999999985 689999999999
Q ss_pred eeee-eeeecCHHHHHHHHHH
Q 007815 440 LLTI-NIDKNTEKDLQLSVDE 459 (588)
Q Consensus 440 ~i~~-~Gekv~e~~v~~al~~ 459 (588)
+|++ +||+|++.+||+++.+
T Consensus 595 lIkls~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 595 LVKLSQGEYIETDMLNNLYSQ 615 (746)
T ss_pred eEEeCCCEEEchHHHHHHHhc
Confidence 9995 7999999999999975
No 93
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=99.25 E-value=4.9e-11 Score=126.69 Aligned_cols=63 Identities=16% Similarity=0.335 Sum_probs=56.9
Q ss_pred ccCCCCeEEEEE---cccccee--------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHH
Q 007815 393 EVKVGEEYEIIV---TNVAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 455 (588)
Q Consensus 393 eve~G~~yELVv---Tt~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~ 455 (588)
+++.|..|||++ +++.||| ||+|||+...+. .+.++++||.+|||..+||+|++.|||+
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~e----nG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDE----NGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcC----CCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 567788899999 5568888 799999999996 6899999999999999999999999999
Q ss_pred HHHH
Q 007815 456 SVDE 459 (588)
Q Consensus 456 al~~ 459 (588)
.+.+
T Consensus 502 fL~~ 505 (596)
T KOG1177|consen 502 FLNK 505 (596)
T ss_pred HHhh
Confidence 8875
No 94
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.25 E-value=1.6e-09 Score=119.65 Aligned_cols=131 Identities=13% Similarity=0.051 Sum_probs=89.8
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCC---CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+.+++ ++..||. ....+.+++.+ +.+++ ..||+||+....-....+ ..+..|..+ ..-++.++++
T Consensus 261 ~~~lr---~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~- 331 (502)
T PRK08276 261 VSSLR---VAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVITSEDWLAHPGSVGKAV---LGEVRILDED- 331 (502)
T ss_pred cccce---EEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEecCccccccCCCcceec---ccEEEEECCC-
Confidence 35778 7777773 55667788888 46777 899999975311111111 112233322 2234444322
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
. ..+..|+.|||++++ ..||| +|+|||+++++. ...+.++||.
T Consensus 332 -----------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~ 391 (502)
T PRK08276 332 -----------G-----NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRK 391 (502)
T ss_pred -----------C-----CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccC
Confidence 1 245679999999984 23443 689999999985 5789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+++++++|++|++.+||.++.+.
T Consensus 392 ~~~i~~~G~~v~~~~iE~~i~~~ 414 (502)
T PRK08276 392 SDMIISGGVNIYPQEIENLLVTH 414 (502)
T ss_pred cceEEeCCEEeCHHHHHHHHHhC
Confidence 99999999999999999999753
No 95
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.25 E-value=3.5e-10 Score=130.28 Aligned_cols=134 Identities=13% Similarity=0.159 Sum_probs=84.6
Q ss_pred CCCceeeEEeecCc--HHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~--~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++++ .+.+||+ .+...++-+.+++++++ ++||+||+...+... +. ..++..|.. .|+ .-+...+.+ +
T Consensus 383 ~~lr---~~~~gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p-~~~-~evki~d~~--~ 454 (660)
T PLN02430 383 GRLR---LLISGGAPLSTEIEEFLRVTSCAFVV-QGYGLTETLGPTTLGFPDEMCMLGTVGAP-AVY-NELRLEEVP--E 454 (660)
T ss_pred CeEE---EEEECCCCCCHHHHHHHHHhcCCCee-eecchhhhhhceEeeccccCCCCCCccCC-CCc-eEEEEEEcC--C
Confidence 3677 6677774 22223333445557888 999999974322211 11 112333332 121 112222222 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCce
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 440 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~ 440 (588)
.+ ..++..|..|||+|.+ +.||| ||+|||+++++. .+.+.|+||.+|+
T Consensus 455 ~g------------~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~----dG~l~i~gR~kd~ 518 (660)
T PLN02430 455 MG------------YDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILP----NGVLKIIDRKKNL 518 (660)
T ss_pred cC------------cccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECC----CCcEEEEEccccc
Confidence 11 0133446679999966 57887 699999999974 6789999999999
Q ss_pred eee-eeeecCHHHHHHHHHH
Q 007815 441 LTI-NIDKNTEKDLQLSVDE 459 (588)
Q Consensus 441 i~~-~Gekv~e~~v~~al~~ 459 (588)
|++ +|++|++.+||+++.+
T Consensus 519 ik~~~G~~V~p~~IE~~l~~ 538 (660)
T PLN02430 519 IKLSQGEYVALEYLENVYGQ 538 (660)
T ss_pred EEcCCCcEEchHHHHHHHhc
Confidence 996 6999999999998865
No 96
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.24 E-value=1.7e-09 Score=122.17 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=55.0
Q ss_pred ccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHH
Q 007815 393 EVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 456 (588)
Q Consensus 393 eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~a 456 (588)
++..|+.|||++++ +.||| +|+|||++.+ . ...+.|+||.+|+++++|++|++.+||++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 45679999999976 35666 7999999987 4 57899999999999999999999999999
Q ss_pred HHHH
Q 007815 457 VDEA 460 (588)
Q Consensus 457 l~~~ 460 (588)
|.+.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9974
No 97
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.24 E-value=1.1e-09 Score=122.73 Aligned_cols=129 Identities=15% Similarity=0.161 Sum_probs=87.1
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC-CC---CCcccceeeccCceEEEEEeCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-SL---PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~-~~---~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
++++ .+.+||. ....+.+.+ + +++++ +.||+||+........ .+ .....|.. ..+..++.++.+
T Consensus 302 ~~lr---~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~i~d~~- 372 (547)
T PRK06087 302 SALR---FFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGYA--AAGVEIKVVDEA- 372 (547)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCcc--CCCceEEEEcCC-
Confidence 5688 6666663 444444544 3 68999 9999999743221111 11 01112222 234455655432
Q ss_pred CCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
. .+++.|+.|||++.+ +.||| +|+|||+++.+. .+.+.|.||.
T Consensus 373 -----------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~ 432 (547)
T PRK06087 373 -----------R-----KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDE----AGYIKITGRK 432 (547)
T ss_pred -----------C-----CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECC----CCCEEEEecc
Confidence 1 255789999999955 34443 699999999875 5789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHH
Q 007815 438 NLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~ 459 (588)
+|+++++|++|++.+|+++|..
T Consensus 433 ~d~i~~~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 433 KDIIVRGGENISSREVEDILLQ 454 (547)
T ss_pred hhhhhcCCEEECHHHHHHHHHh
Confidence 9999999999999999999975
No 98
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.24 E-value=2.7e-09 Score=115.41 Aligned_cols=59 Identities=12% Similarity=-0.009 Sum_probs=51.6
Q ss_pred CCCeEEEEEccccceeecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 396 VGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 396 ~G~~yELVvTt~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.|+.+||++++..| +|+|||+++.+. ...+.|+||.+++++++|++|++.+||+++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 36678999988665 688999999875 578999999999999999999999999999853
No 99
>PRK05691 peptide synthase; Validated
Probab=99.24 E-value=4.3e-10 Score=152.21 Aligned_cols=133 Identities=13% Similarity=0.146 Sum_probs=92.7
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCC----CCCCcccceeeccCceEEEEEeCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----SLPPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~----~~~~~~~~~~l~~~~~~~Efip~~ 373 (588)
.|+|+ .++.||. ....+++.+.+++++++ +.||.||+.+...... .......|..+ ++ ..+..++.+
T Consensus 1387 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~-~~-~~~~i~d~~ 1460 (4334)
T PRK05691 1387 CTSLR---RLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRPL-GN-VLCRVLDAE 1460 (4334)
T ss_pred CCccc---EEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCccccee-CC-CEEEEECCC
Confidence 46788 6677763 55556677777788999 9999999865432111 11111123322 22 233344322
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------ecccCCEEEEeceeCCCC
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNSTP 429 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~~~P 429 (588)
. ..+++|+.|||+|.. ..||+ +|+|||+++... .+
T Consensus 1461 ------------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~----dG 1519 (4334)
T PRK05691 1461 ------------L-----NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNA----DG 1519 (4334)
T ss_pred ------------C-----CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECC----CC
Confidence 1 246789999999965 24443 699999999985 68
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 430 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 430 ~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.|+||.+++++++|++|...|||.+|.+.
T Consensus 1520 ~l~~~GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1520 ALEYLGRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred CEEEecccCcEEEECCEEcCHHHHHHHHHhC
Confidence 9999999999999999999999999999863
No 100
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.23 E-value=1.3e-09 Score=123.39 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=53.0
Q ss_pred CCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 397 GEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 397 G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+.|||+|++ +.||| ||+|||+++.+. .+.+.|+||.+|+++++|++|++.+||+++.+.
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~----dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHP----DGHVEIKDRSKDIIISGGENISSVEVENVLYKY 465 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEcC----CCeEEEEeccCcEEEECCEEECHHHHHHHHHhC
Confidence 4679999976 46776 799999999974 679999999999999999999999999999863
No 101
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.23 E-value=3.3e-09 Score=112.34 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=40.2
Q ss_pred ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 412 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 412 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
||+|||++++ . ...+.|+||.+|+|+++|++|++.+||.+|.+.
T Consensus 235 ~~~TGDl~~~-~----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGAL-D----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEE-e----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 8999999998 3 468999999999999999999999999999864
No 102
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.22 E-value=3.2e-09 Score=117.84 Aligned_cols=130 Identities=16% Similarity=0.098 Sum_probs=86.7
Q ss_pred CCCceeeEEeecC--cHHHHHHHHHHhCCCCeeccccccCcccceecCC-CC--CCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~--~~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
+.++ ++..++ ....+.++.+.+ +++++ +.||+||+....... +. ......|..+ .+.-.++++.+
T Consensus 288 ~~l~---~~~~~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~--~g~~~~i~d~~--- 357 (517)
T PRK08008 288 HCLR---EVMFYLNLSDQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRPG--FCYEAEIRDDH--- 357 (517)
T ss_pred ccce---eeEEecCCCHHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCccccCC--CCcEEEEECCC---
Confidence 4566 444443 355556677777 58999 999999975322111 11 1111122221 22344444432
Q ss_pred cccccccCCCccccccccCCCCeEEEEEccc------ccee--------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt~------~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+ .++..|+.|||+++.. .||| +|+|||++..+. ...+.|.||
T Consensus 358 ---------~-----~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR 419 (517)
T PRK08008 358 ---------N-----RPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDR 419 (517)
T ss_pred ---------C-----CCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeec
Confidence 1 2556799999999752 3444 599999999885 678999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
.+|+++++|++|++.+||.++.+
T Consensus 420 ~~d~i~~~G~~i~p~~iE~~l~~ 442 (517)
T PRK08008 420 RCNMIKRGGENVSCVELENIIAT 442 (517)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999975
No 103
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.22 E-value=1.7e-09 Score=122.00 Aligned_cols=63 Identities=27% Similarity=0.342 Sum_probs=54.9
Q ss_pred ccCCCCeEEEEEcc---cccee-------------------------ecccCCEEEEeceeCCCCEEEEEeecCceeeee
Q 007815 393 EVKVGEEYEIIVTN---VAGLY-------------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 444 (588)
Q Consensus 393 eve~G~~yELVvTt---~~Gl~-------------------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~ 444 (588)
++++|+.|||+|.+ +.||| +|+|||++.++ ...+.|+||.+|+|+++
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEEC
Confidence 56789999999966 35655 79999999875 36899999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 007815 445 IDKNTEKDLQLSVDEA 460 (588)
Q Consensus 445 Gekv~e~~v~~al~~~ 460 (588)
|++|++.+||++|.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999864
No 104
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.22 E-value=1.4e-09 Score=126.54 Aligned_cols=132 Identities=10% Similarity=-0.006 Sum_probs=82.2
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecC-CCCC--CCcccceeeccCceEEEEEeCCC
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPSL--PPELATFAVLPNIGYFEFIPQRL 374 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~-~~~~--~~~~~~~~l~~~~~~~Efip~~~ 374 (588)
+++|+ .+.+||. ......+.+.++..++. +.||.||+...+.. .+.. .++..+.. .++ .-...++.+
T Consensus 470 lssLr---~i~s~Ge~l~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~p-~~g-~~v~v~d~~- 542 (728)
T PLN03052 470 WSSIR---CFGSTGEASSVDDYLWLMSRAGYKPII-EYCGGTELGGGFVTGSLLQPQAFAAFSTP-AMG-CKLFILDDS- 542 (728)
T ss_pred hhhee---EEEecCCCCCHHHHHHHHHhcCCCCeE-eeccChhhCcccccCCCCCCCCCCccccC-CCC-ceEEEECCC-
Confidence 36788 6677764 22223344445446787 99999997432211 1111 11112221 122 223333321
Q ss_pred CCcccccccCCCccccccccCCCC--eEEEEEccc--c------------cee----------ecccCCEEEEeceeCCC
Q 007815 375 GNLESQVLCIEPKPVGLTEVKVGE--EYEIIVTNV--A------------GLY----------RYRLGDVVKVMGFHNST 428 (588)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~eve~G~--~yELVvTt~--~------------Gl~----------RYr~GDvv~v~~~~~~~ 428 (588)
++ +|..|+ .|||++... . ++| .|+|||+++.+. .
T Consensus 543 -----------g~-----~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~----d 602 (728)
T PLN03052 543 -----------GN-----PYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTS----G 602 (728)
T ss_pred -----------CC-----CCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECC----C
Confidence 22 345564 599999531 1 122 489999999985 6
Q ss_pred CEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 007815 429 PELKFICRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 429 P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
..+.|+||.||+||++|++|++.|||++|..
T Consensus 603 G~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 603 GYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred CeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 8899999999999999999999999999864
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.20 E-value=2.2e-09 Score=130.72 Aligned_cols=127 Identities=14% Similarity=0.154 Sum_probs=85.8
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC--CCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~--~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++++ .+.+||. +..++.+++.+ +++++ +.||+||+...+...+. ...+..|..+ |+ .-....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~-~g-~~~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGRLL-PG-IEYRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCccC-CC-CeEEEeecC---
Confidence 4678 6777773 55556677777 58898 99999998543322211 1111223221 11 112222211
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
..|+.|||.+.+ +.||| ||+|||+++.+. .+.+.|+||.+|
T Consensus 977 ------------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~~d 1034 (1140)
T PRK06814 977 ------------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDE----EGFITIKGRAKR 1034 (1140)
T ss_pred ------------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECC----CCeEEEEecccC
Confidence 136778999865 34554 799999999985 689999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 007815 440 LLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 440 ~i~~~Gekv~e~~v~~al~~~ 460 (588)
+++++|++|++.+||+++.+.
T Consensus 1035 ~i~~~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1035 FAKIAGEMISLAAVEELAAEL 1055 (1140)
T ss_pred eeeeCCEEECHHHHHHHHHhc
Confidence 999999999999999998864
No 106
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.20 E-value=3.2e-09 Score=114.83 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=50.7
Q ss_pred CeEEEEEccc---ccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 007815 398 EEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 398 ~~yELVvTt~---~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
+.|||++++. .||| +|+|||+++.+. .+.+.+.||.+|+++++|++|+..+||+++.+
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 6689999873 4555 399999999986 57899999999999999999999999999975
No 107
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=99.19 E-value=9e-11 Score=131.14 Aligned_cols=134 Identities=19% Similarity=0.200 Sum_probs=93.5
Q ss_pred ccCCCCceeeEEeecCcH---HHHHHHHHHhCCCCeeccccccCcccceecC-CCCC-CCcccceeeccCceEEEEEeCC
Q 007815 299 ELFPNAKYLSGIMTGSME---HYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPSL-PPELATFAVLPNIGYFEFIPQR 373 (588)
Q Consensus 299 ~lwP~L~~i~~~~~g~~~---~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~-~~~~-~~~~~~~~l~~~~~~~Efip~~ 373 (588)
.|+++.+ .+++|+++ ....-++-.+ ||+|+ ++||.||+..+... .+.+ ..+++|..+ | ++-+=++++.
T Consensus 416 ~LGg~vr---~~~sGaAPls~ev~~F~r~~~-g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~p~-p-~~~vKL~dvp 488 (691)
T KOG1256|consen 416 SLGGNVR---LIISGAAPLSPEVLTFFRAAL-GCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGPPV-P-GNEVKLVDVP 488 (691)
T ss_pred HhcCcee---EEEecCCCCCHHHHHHHHHhc-Cceee-ecccccccCCceEeccCCCCCCCCcCCcc-c-CceEEEechH
Confidence 4667889 88999863 3333333344 69999 99999998643322 2222 233344433 2 2233334444
Q ss_pred CCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 374 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 374 ~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
|.+ --..|..|||.|.. +.||| |.+|||+++.+. .+.+.++||
T Consensus 489 --e~n--------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidR 548 (691)
T KOG1256|consen 489 --EMN--------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDR 548 (691)
T ss_pred --HhC--------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEec
Confidence 222 11356689999955 69999 899999999996 789999999
Q ss_pred cCceeeee-eeecCHHHHHHHHHH
Q 007815 437 RNLLLTIN-IDKNTEKDLQLSVDE 459 (588)
Q Consensus 437 ~~d~i~~~-Gekv~e~~v~~al~~ 459 (588)
+++++++. ||+|.+..||++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99998886 899999999999986
No 108
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.18 E-value=3.4e-10 Score=131.20 Aligned_cols=132 Identities=15% Similarity=0.164 Sum_probs=85.4
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC-C-CCCCcccceeeccCceEEEEEeCCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P-SLPPELATFAVLPNIGYFEFIPQRLGN 376 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~-~~~~~~~~~~l~~~~~~~Efip~~~~~ 376 (588)
++++ .+.+||. ....+.++..+ + +++ ++||+||+....... + ....+..|..+ ++ .|+.-.+ +
T Consensus 428 ~~lr---~i~~GGa~l~~~~~~~~~~~~-~-~l~-~~YG~TEt~~~~~~~~~~~~~~~svG~p~-~g---~evkI~d--~ 495 (700)
T PTZ00216 428 GRVR---AMLSGGGPLSAATQEFVNVVF-G-MVI-QGWGLTETVCCGGIQRTGDLEPNAVGQLL-KG---VEMKLLD--T 495 (700)
T ss_pred CcEE---EEEECCCCCCHHHHHHHHHHh-h-hHh-hccCcccccccccccCCCCCCCCCcCCcC-CC---eEEEEee--c
Confidence 4677 7777774 33334444445 4 888 999999974322111 1 11122234322 22 2332222 1
Q ss_pred cccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 377 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 377 ~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
++. . ..+.+|..|||+|.. +.||| +|+|||+++++. .+.+.|+||.+|
T Consensus 496 ~~~-------~----~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~----dG~l~i~GR~kd 560 (700)
T PTZ00216 496 EEY-------K----HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAA----NGTLRIIGRVKA 560 (700)
T ss_pred hhh-------c----cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcC----CCcEEEEEehHh
Confidence 110 0 123456678999965 47777 699999999985 689999999999
Q ss_pred eee-eeeeecCHHHHHHHHHHH
Q 007815 440 LLT-INIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 440 ~i~-~~Gekv~e~~v~~al~~~ 460 (588)
+++ .+|++|.+.+||+++.+.
T Consensus 561 ~ik~~~G~~I~p~eIE~~l~~~ 582 (700)
T PTZ00216 561 LAKNCLGEYIALEALEALYGQN 582 (700)
T ss_pred heecCCCceeccHHHHHHHhcC
Confidence 997 899999999999999763
No 109
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.18 E-value=7.8e-10 Score=118.92 Aligned_cols=119 Identities=21% Similarity=0.334 Sum_probs=79.9
Q ss_pred cCCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccc-eecCC-CCC--CCcccceeeccCceEEEEEeC
Q 007815 300 LFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVN-PSL--PPELATFAVLPNIGYFEFIPQ 372 (588)
Q Consensus 300 lwP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~-~~~--~~~~~~~~l~~~~~~~Efip~ 372 (588)
-++++| .+..|| .....+++++.++.++++ +.||+||++. ++... ... ..+..|.. .| +.-++++++
T Consensus 275 ~l~~lr---~v~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~~~ivd~ 348 (417)
T PF00501_consen 275 DLSSLR---TVISGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVGKP-LP-GVEVKIVDP 348 (417)
T ss_dssp TGTT-S---EEEEESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEBEE-ST-TEEEEEECT
T ss_pred cccccc---ccccccccCChhhccccccccccccce-ecccccccceeeeccccccccccccccccc-cc-ccccccccc
Confidence 345688 444444 367777888888645788 9999999754 33221 111 22223432 23 556777765
Q ss_pred CCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEEEEe
Q 007815 373 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFIC 435 (588)
Q Consensus 373 ~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~g 435 (588)
+ +.+ .+++|+.|||+|++ ..||| +|+|||+++++. .+.+.++|
T Consensus 349 ~-----------~~~-----~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~----~G~~~~~G 408 (417)
T PF00501_consen 349 N-----------TGE-----PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDE----DGYLYILG 408 (417)
T ss_dssp T-----------TSS-----BESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEET----TSEEEEEE
T ss_pred c-----------ccc-----cccccccccccccCCccceeeeccccccccccccccceecceEEEECC----CCeEEEEE
Confidence 3 122 45789999999985 35554 599999999984 58999999
Q ss_pred ecCceeeee
Q 007815 436 RRNLLLTIN 444 (588)
Q Consensus 436 R~~d~i~~~ 444 (588)
|.+|+|+++
T Consensus 409 R~~~~i~~~ 417 (417)
T PF00501_consen 409 RSDDMIKVR 417 (417)
T ss_dssp EGSCEEEET
T ss_pred eeCCEEEeC
Confidence 999999874
No 110
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.17 E-value=6.5e-10 Score=126.95 Aligned_cols=129 Identities=22% Similarity=0.336 Sum_probs=79.7
Q ss_pred cCCCCceeeEEeecCc---HHHHHHHHHH----hC-CCCeeccccccCcccceecCCC--CCCCcccceeeccCceEEEE
Q 007815 300 LFPNAKYLSGIMTGSM---EHYLKKLRHY----AG-DLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEF 369 (588)
Q Consensus 300 lwP~L~~i~~~~~g~~---~~~~~~l~~~----~g-~~~v~~~~YgaSEg~~~~~~~~--~~~~~~~~~~l~~~~~~~Ef 369 (588)
.+++|+ .+.+||. ....+.+.+. +| +++++ ++||+||+...+.... ....+..|.. .|+ +|+
T Consensus 344 ~~~slr---~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~p-~pg---~~v 415 (624)
T PRK12582 344 FFKNLR---LMAYGGATLSDDLYERMQALAVRTTGHRIPFY-TGYGATETAPTTTGTHWDTERVGLIGLP-LPG---VEL 415 (624)
T ss_pred Hhhhee---EEEecCCCCCHHHHHHHHHHHHhhcCCCceEE-eccccccccceeecccCCCCCCCCCCcC-CCC---cEE
Confidence 356788 7777774 4444555553 33 37888 9999999754322111 1111112221 111 111
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee--------------ecccCCEEEEeceeCCCCEEE
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELK 432 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~--------------RYr~GDvv~v~~~~~~~P~i~ 432 (588)
+ -+++|+.|||+|.+ +.||| ||+|||++++.+.......+.
T Consensus 416 -----------------~-----i~~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~ 473 (624)
T PRK12582 416 -----------------K-----LAPVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLI 473 (624)
T ss_pred -----------------E-----EccCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceE
Confidence 1 12458889999966 46776 499999999843211246789
Q ss_pred EEeecCceeee-eeeecCHHHHH--HHHH
Q 007815 433 FICRRNLLLTI-NIDKNTEKDLQ--LSVD 458 (588)
Q Consensus 433 f~gR~~d~i~~-~Gekv~e~~v~--~al~ 458 (588)
|+||.+|++++ +|+||++.++| .++.
T Consensus 474 i~GR~~d~i~~~~G~~i~p~~iE~e~~l~ 502 (624)
T PRK12582 474 FDGRVAEDFKLSTGTWVSVGTLRPDAVAA 502 (624)
T ss_pred EeccchhhEecCCCcEechHHHHHHHHHh
Confidence 99999999885 79999988885 4444
No 111
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.17 E-value=2.2e-09 Score=118.04 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=52.8
Q ss_pred CCCeEEEEEcc---cccee--------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 396 VGEEYEIIVTN---VAGLY--------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 396 ~G~~yELVvTt---~~Gl~--------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.|+.|||+|.+ +.||| +|+|||+++++. .+.+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~----dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDA----QGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcC----CCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 48889999954 45665 499999999874 678999999999999999999999999999864
No 112
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.17 E-value=3.7e-09 Score=118.42 Aligned_cols=132 Identities=10% Similarity=0.084 Sum_probs=85.6
Q ss_pred CCCCceeeEEeecC---cHHHHHHHHHHhCCCCeeccccccCcccc-eecCC-CC-----CC------CcccceeeccCc
Q 007815 301 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVN-PS-----LP------PELATFAVLPNI 364 (588)
Q Consensus 301 wP~L~~i~~~~~g~---~~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~-~~-----~~------~~~~~~~l~~~~ 364 (588)
+++++ .+.+|| .....+++++.+ +++++ +.||+||+.. +.... .. .+ ....|..+ .+
T Consensus 292 ~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~--pg 364 (539)
T PRK07008 292 FSTLR---RTVIGGSACPPAMIRTFEDEY-GVEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVI--YG 364 (539)
T ss_pred cccce---EEEEcCCCCCHHHHHHHHHHh-CCcee-cccccccccccceecccccccccCCchhhhhhcccCCccc--cc
Confidence 46777 555555 256667777778 58999 9999999743 21110 00 00 00112211 12
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCC--CCeEEEEEcc---cccee----------ecccCCEEEEeceeCCCC
Q 007815 365 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKV--GEEYEIIVTN---VAGLY----------RYRLGDVVKVMGFHNSTP 429 (588)
Q Consensus 365 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~--G~~yELVvTt---~~Gl~----------RYr~GDvv~v~~~~~~~P 429 (588)
.-.++++.+ .. +++. ++.|||+++. ..||| +|+|||+++.+. ..
T Consensus 365 ~~~~i~d~~------------~~-----~~~~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg 423 (539)
T PRK07008 365 VDMKIVGDD------------GR-----ELPWDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DG 423 (539)
T ss_pred eEEEEECCC------------CC-----ccCCCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CC
Confidence 234444322 11 2222 3568999987 24554 499999999975 57
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 430 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 430 ~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.|+||.+|+++++|+||++.+||+++...
T Consensus 424 ~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 454 (539)
T PRK07008 424 FMQITDRSKDVIKSGGEWISSIDIENVAVAH 454 (539)
T ss_pred cEEEeecccCEEEeCCeEEcHHHHHHHHHhC
Confidence 8999999999999999999999999998753
No 113
>PRK05691 peptide synthase; Validated
Probab=99.14 E-value=1.2e-09 Score=148.09 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=88.5
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecC---CCCCCCc---ccceeeccCceEEEEEe
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANV---NPSLPPE---LATFAVLPNIGYFEFIP 371 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~---~~~~~~~---~~~~~l~~~~~~~Efip 371 (588)
.++|+ .++.||- ....+++.+.++++.++ +.||.||+.+.+.. +.....+ ..|..+ ++...+ .+
T Consensus 3982 ~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~-v~- 4054 (4334)
T PRK05691 3982 LDGLR---WMLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSPT-DNNRLY-LL- 4054 (4334)
T ss_pred CCCce---EEEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCCcc-CCCEEE-EE-
Confidence 35788 6666662 34444555556778999 99999998654321 1111110 012211 222111 12
Q ss_pred CCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee---------------------ecccCCEEEEeceeCC
Q 007815 372 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY---------------------RYRLGDVVKVMGFHNS 427 (588)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~---------------------RYr~GDvv~v~~~~~~ 427 (588)
+ +. . ..|+.|..|||+|.. ..||+ .|||||+++...
T Consensus 4055 -d--~~--------~-----~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~---- 4114 (4334)
T PRK05691 4055 -D--EA--------L-----ELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRS---- 4114 (4334)
T ss_pred -C--CC--------C-----CCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecC----
Confidence 2 11 1 245789999999976 35555 399999999985
Q ss_pred CCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 428 TPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 428 ~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+.++|+||.|+.++++|.+|...|||++|.+.
T Consensus 4115 dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4115 DGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred CCcEEEecccCCcEEeceEEecHHHHHHHHHhC
Confidence 689999999999999999999999999998754
No 114
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.13 E-value=6.9e-09 Score=117.15 Aligned_cols=131 Identities=18% Similarity=0.127 Sum_probs=85.2
Q ss_pred CCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCC-CCC---C------CcccceeeccCceEEEE
Q 007815 303 NAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL---P------PELATFAVLPNIGYFEF 369 (588)
Q Consensus 303 ~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~-~~~---~------~~~~~~~l~~~~~~~Ef 369 (588)
+++ +++.||. ....+++++.+ +++++ +.||+||+....... +.. . ....|. .+.+..++.
T Consensus 299 ~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~i 371 (576)
T PRK05620 299 SLQ---EIYVGGSAVPPILIKAWEERY-GVDVV-HVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGR--FPASLEYRI 371 (576)
T ss_pred cee---EEEEcCCCCCHHHHHHHHHHh-CCcee-eeccccccccceeeeccCCccccccccccccccCC--cCCceeEEE
Confidence 677 6666663 55556677777 58999 999999974321111 100 0 000121 112233333
Q ss_pred EeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee------------------------------ecccC
Q 007815 370 IPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------------------RYRLG 416 (588)
Q Consensus 370 ip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~------------------------------RYr~G 416 (588)
++.. ..+ +...|+.|||++++ ..||| +|+||
T Consensus 372 ~~~g-------------~~~---~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TG 435 (576)
T PRK05620 372 VNDG-------------QVM---ESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTG 435 (576)
T ss_pred ecCC-------------ccc---cCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecC
Confidence 3321 111 11346789999976 24443 59999
Q ss_pred CEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 417 DVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 417 Dvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++. ...+.|+||.+|++++.|++|++.+||.+|.+.
T Consensus 436 D~~~~~~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~ 475 (576)
T PRK05620 436 DVGSVTR----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMAA 475 (576)
T ss_pred ceEEEcC----CceEEEEechhhhhhcCCEEEcHHHHHHHHhcC
Confidence 9999875 678999999999999999999999999999863
No 115
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.12 E-value=2e-08 Score=113.01 Aligned_cols=121 Identities=20% Similarity=0.302 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhCCCCeeccccccCcccceecCCC--CC-------CCcccceeeccCceEEEEEeCCCCCcccccccCCC
Q 007815 316 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SL-------PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEP 386 (588)
Q Consensus 316 ~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~--~~-------~~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~ 386 (588)
....+.+++.+| ..++...||+||......... .. .+...|.. .| +.-+++++++ . .
T Consensus 341 ~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p-~~-g~~v~v~d~~--~---------~ 406 (567)
T PRK06178 341 PDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLP-VP-GTEFKICDFE--T---------G 406 (567)
T ss_pred HHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccc-cC-CcEEEEEcCC--C---------C
Confidence 556667777785 556535799999643211111 00 01112322 22 3345666543 1 1
Q ss_pred ccccccccCCCCeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCH
Q 007815 387 KPVGLTEVKVGEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTE 450 (588)
Q Consensus 387 ~~l~~~eve~G~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e 450 (588)
. .+..|+.|||+|++ +.||| +|+|||+++.++ ...+.|+||.+|+++++|+++++
T Consensus 407 ~-----~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~ 477 (567)
T PRK06178 407 E-----LLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFP 477 (567)
T ss_pred C-----cCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECH
Confidence 2 35678999999966 34554 599999999975 57899999999999999999999
Q ss_pred HHHHHHHHH
Q 007815 451 KDLQLSVDE 459 (588)
Q Consensus 451 ~~v~~al~~ 459 (588)
.+||+++.+
T Consensus 478 ~eiE~~l~~ 486 (567)
T PRK06178 478 SEVEALLGQ 486 (567)
T ss_pred HHHHHHHHh
Confidence 999999875
No 116
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.10 E-value=2.1e-08 Score=112.29 Aligned_cols=132 Identities=14% Similarity=0.127 Sum_probs=84.6
Q ss_pred CCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCC-------------cccceeeccCc
Q 007815 301 FPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP-------------ELATFAVLPNI 364 (588)
Q Consensus 301 wP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~~-------------~~~~~~l~~~~ 364 (588)
.|+++ .+.+||. ...++.+++ + +++++ +.||+||+..........++ ...|... +
T Consensus 293 ~~~lr---~~~~~G~~l~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~-- 363 (542)
T PRK06018 293 LPHLK---MVVCGGSAMPRSMIKAFED-M-GVEVR-HAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPP-F-- 363 (542)
T ss_pred cccce---EEEEcCCCCCHHHHHHHHH-h-CCCeE-eeecccccCcccccccCccccccCCchhhhhccccCCCCC-C--
Confidence 46788 6666663 566677888 7 68999 99999997432211100000 0011111 1
Q ss_pred eEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------ecccCCEEEEeceeCCCCE
Q 007815 365 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-----------RYRLGDVVKVMGFHNSTPE 430 (588)
Q Consensus 365 ~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~-----------RYr~GDvv~v~~~~~~~P~ 430 (588)
..|+...+ ++ .+.+. ...+..|||++.. +.||| +|+|||+++.+. ...
T Consensus 364 -g~~i~v~d--~~--------~~~~~---~~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~ 425 (542)
T PRK06018 364 -GVEMKITD--DA--------GKELP---WDGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGY 425 (542)
T ss_pred -CcEEEEEC--CC--------CCCCC---CCCCceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----Ccc
Confidence 12333322 11 12111 1123579999964 35565 499999999874 578
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHH
Q 007815 431 LKFICRRNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 431 i~f~gR~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
+.|+||.+|+++++|++|++.+||.++.+
T Consensus 426 ~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 426 MRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred EEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999999999975
No 117
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.99 E-value=6.8e-09 Score=118.30 Aligned_cols=131 Identities=21% Similarity=0.240 Sum_probs=81.7
Q ss_pred ccCCCCeEEEEEcc---cccee--------------------------------ecccCCEEEEeceeCCCCEEEEEeec
Q 007815 393 EVKVGEEYEIIVTN---VAGLY--------------------------------RYRLGDVVKVMGFHNSTPELKFICRR 437 (588)
Q Consensus 393 eve~G~~yELVvTt---~~Gl~--------------------------------RYr~GDvv~v~~~~~~~P~i~f~gR~ 437 (588)
++++|+.|||+|.. +.||| ||+|||++.+. .+.+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEecc
Confidence 56789999999966 35665 79999999864 4789999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChh
Q 007815 438 NLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAG 517 (588)
Q Consensus 438 ~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~ 517 (588)
+|+|+++|++|++.+||++|.+..+.+ ..+.+.-|. .++.. ..+-+++++..........+++.+.+.+.| ...
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~~p~V--~~~~v~v~~-~~~~~--~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l-~~~ 571 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEASPMV--RRGYVTAFT-VPAED--NERLVIVAERAAGTSRADPAPAIDAIRAAV-SRR 571 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHhcccc--cCCcEEEEE-ecCCC--cceEEEEEEecCCcccccHHHHHHHHHHHH-HHh
Confidence 999999999999999999998653322 111122122 22322 234457777643311112233444444443 111
Q ss_pred hHHHhhcCCcCCeEEEEeccchHH
Q 007815 518 YVSARKVNAIGPLELRVVLKGTFQ 541 (588)
Q Consensus 518 Y~~~R~~g~l~p~~v~~v~~gtf~ 541 (588)
| .+.|-.+.+|..+.|.
T Consensus 572 ~-------~~~p~~v~~v~~~~lP 588 (612)
T PRK12476 572 H-------GLAVADVRLVPAGAIP 588 (612)
T ss_pred h-------CCcceEEEEECCCCcC
Confidence 1 1334467777765554
No 118
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.99 E-value=7e-08 Score=105.60 Aligned_cols=44 Identities=11% Similarity=0.118 Sum_probs=40.3
Q ss_pred ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 412 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 412 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+|||+++++ ...+.|.||.+|+++++|++|++.+||++|.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 69999999987 367999999999999999999999999999864
No 119
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.98 E-value=5.2e-08 Score=108.99 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=51.5
Q ss_pred CeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 398 EEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 398 ~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.|||+|++ +.||| ||+|||+++.+. ...+.|+||.+|+++++|++|++.+||.+|.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 369999976 35665 599999999985 578999999999999999999999999999753
No 120
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.89 E-value=6e-08 Score=107.64 Aligned_cols=130 Identities=11% Similarity=0.036 Sum_probs=89.4
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ .+++||. ....+.+++++ +++++ ..||+||+......... ..++..|..+ ++ ..++++.+
T Consensus 275 ~~l~---~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~-~g--~~~i~d~~-- 344 (511)
T PRK13391 275 SSLE---VAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGRAM-FG--DLHILDDD-- 344 (511)
T ss_pred ccee---EEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCCcc-cc--eEEEECCC--
Confidence 3677 6666662 55667788888 47788 99999997532211111 1112233322 22 34555432
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc--ccee---------------ecccCCEEEEeceeCCCCEEEEEeecC
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--AGLY---------------RYRLGDVVKVMGFHNSTPELKFICRRN 438 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~--~Gl~---------------RYr~GDvv~v~~~~~~~P~i~f~gR~~ 438 (588)
+ .+++.|+.|||++.+. .||| ||+|||+++.+. ...+.|.||.+
T Consensus 345 ----------~-----~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~----~g~l~~~gR~~ 405 (511)
T PRK13391 345 ----------G-----AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDE----DGYLYLTDRAA 405 (511)
T ss_pred ----------C-----CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEECC----CccEEEeccCC
Confidence 1 1346799999999772 3443 689999999875 67899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 007815 439 LLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 439 d~i~~~Gekv~e~~v~~al~~~ 460 (588)
|+++++|++|++.+|+++|.+.
T Consensus 406 ~~i~~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 406 FMIISGGVNIYPQEAENLLITH 427 (511)
T ss_pred CEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999853
No 121
>PLN02479 acetate-CoA ligase
Probab=98.87 E-value=5.1e-08 Score=109.99 Aligned_cols=59 Identities=12% Similarity=0.102 Sum_probs=51.4
Q ss_pred CeEEEEEcc---cccee-------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 398 EEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 398 ~~yELVvTt---~~Gl~-------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+.|||+++. +.||| +|+|||+++++. ...+.|+||.+|++++.|++|++.+||.++.+.
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~ 475 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHP----DGYIEIKDRSKDIIISGGENISSLEVENVVYTH 475 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEcC----CccEEEeccccceEEeCCEEEcHHHHHHHHHhC
Confidence 579999976 35666 699999999874 678999999999999999999999999999753
No 122
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.87 E-value=5.1e-08 Score=117.38 Aligned_cols=146 Identities=7% Similarity=-0.002 Sum_probs=92.2
Q ss_pred CCCCceeeEEeecCc-HHHHHHHHHHhCCCCeeccccccCcccceecCCCCCCCcccceeeccCceEEEEEeCCCCCccc
Q 007815 301 FPNAKYLSGIMTGSM-EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 379 (588)
Q Consensus 301 wP~L~~i~~~~~g~~-~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~~~ 379 (588)
.++++ .+.+|++ ....+++.+.+++++++ +.||+||+.+.+...+...++..|..+ |+..-++..+.+ ....
T Consensus 719 ~~slr---~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~p~-pg~~~v~i~~~d--~~~g 791 (994)
T PRK07868 719 NHPVR---LFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGRPL-PGAGRVELAAYD--PEHD 791 (994)
T ss_pred CCceE---EEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCCcc-CCCCceeEEEec--CcCC
Confidence 34677 4455554 55567788888778898 999999985432211111222344432 332123332211 0000
Q ss_pred c-cccCCCccccccccCCCCeEEEEEccc----------cce-----eecccCCEEEEeceeCCCCEEEEEeecCceeee
Q 007815 380 Q-VLCIEPKPVGLTEVKVGEEYEIIVTNV----------AGL-----YRYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 443 (588)
Q Consensus 380 ~-~~~~~~~~l~~~eve~G~~yELVvTt~----------~Gl-----~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~ 443 (588)
+ .-+.++. ..++++|+.|||++... .|+ =+|+|||+++++. .+.+.|+||.+|+|++
T Consensus 792 ~li~d~~G~---~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~----dG~l~~~GR~dd~Ik~ 864 (994)
T PRK07868 792 LILEDDRGF---VRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDD----DGDYWLVDRRGSVIRT 864 (994)
T ss_pred ceeecCCce---EEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcC----CCCEEEeccCCCEEEe
Confidence 0 0000110 02467899999998642 222 3799999999985 7899999999999999
Q ss_pred eeeecCHHHHHHHHHHH
Q 007815 444 NIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 444 ~Gekv~e~~v~~al~~~ 460 (588)
+|++|++.|||++|.+.
T Consensus 865 ~G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 865 ARGPVYTEPVTDALGRI 881 (994)
T ss_pred CCceEcHHHHHHHHhcC
Confidence 99999999999999864
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.86 E-value=3.1e-07 Score=99.21 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=41.1
Q ss_pred ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 412 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 412 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
+|+|||+++.+. .+.+.|+||.+|+|+++|+||++.+||+++.+.
T Consensus 276 ~~~tgD~g~~d~----~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 276 RLDLQDRLAWDK----DGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eeecCceEEEcC----CCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 478999999875 689999999999999999999999999999864
No 124
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.80 E-value=2e-07 Score=103.36 Aligned_cols=133 Identities=14% Similarity=0.071 Sum_probs=86.8
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccc-eecCCCCCCCcccceeeccCceEEEEEeCCCCCc
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 377 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~-~~~~~~~~~~~~~~~~l~~~~~~~Efip~~~~~~ 377 (588)
++++ .+.+||. ....+++++.+++++++ +.||+||... +.......+....+....+ +.-+++++.+
T Consensus 296 ~~l~---~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~-~~~~~i~~~~---- 366 (533)
T PRK07798 296 SSLF---AIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTI-GPRTVVLDED---- 366 (533)
T ss_pred CceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCC-CceEEEECCC----
Confidence 4677 7777773 55566677778778898 9999999633 3221111111111101112 2234444432
Q ss_pred ccccccCCCccccccccCCCCe--EEEEEccc--cc-----------------eeecccCCEEEEeceeCCCCEEEEEee
Q 007815 378 ESQVLCIEPKPVGLTEVKVGEE--YEIIVTNV--AG-----------------LYRYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 378 ~~~~~~~~~~~l~~~eve~G~~--yELVvTt~--~G-----------------l~RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
+. ++++|+. ++++.+.. .| ..+|+|||+++++. ...+.|.||
T Consensus 367 --------~~-----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR 429 (533)
T PRK07798 367 --------GN-----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGR 429 (533)
T ss_pred --------CC-----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEcc
Confidence 12 3455666 78877542 22 23789999999985 678999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.+++++++|++|++.+||+++.+.
T Consensus 430 ~~~~i~~~G~~v~~~eIE~~l~~~ 453 (533)
T PRK07798 430 GSVCINTGGEKVFPEEVEEALKAH 453 (533)
T ss_pred ccceEecCCEEeCHHHHHHHHHhC
Confidence 999999999999999999998753
No 125
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.79 E-value=1.9e-07 Score=103.38 Aligned_cols=129 Identities=9% Similarity=0.067 Sum_probs=88.1
Q ss_pred CCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCcccceecCCCC---CCCcccceeeccCceEEEEEeCCCC
Q 007815 302 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 375 (588)
Q Consensus 302 P~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~~~~~~---~~~~~~~~~l~~~~~~~Efip~~~~ 375 (588)
++++ .+++||. ....+.+++++ +++++ ..||+||+......... ...+..|..+ ++ . +..++.+
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~-~g-~-~~i~d~~-- 339 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGRSV-LG-D-LHICDDD-- 339 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccCceEEecchhhccCCCCcCCcc-cc-e-EEEECCC--
Confidence 4677 6666663 45556677777 47888 89999997432111111 1111233322 22 2 4444322
Q ss_pred CcccccccCCCccccccccCCCCeEEEEEccc---ccee----------------ecccCCEEEEeceeCCCCEEEEEee
Q 007815 376 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------------RYRLGDVVKVMGFHNSTPELKFICR 436 (588)
Q Consensus 376 ~~~~~~~~~~~~~l~~~eve~G~~yELVvTt~---~Gl~----------------RYr~GDvv~v~~~~~~~P~i~f~gR 436 (588)
++ .+++|+.|||+|.+. .||| +|+|||+++++. ...+.|.||
T Consensus 340 ----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR 400 (501)
T PRK13390 340 ----------GN-----ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADR 400 (501)
T ss_pred ----------CC-----CCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeec
Confidence 12 356899999999763 4553 689999999985 678999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHH
Q 007815 437 RNLLLTINIDKNTEKDLQLSVDE 459 (588)
Q Consensus 437 ~~d~i~~~Gekv~e~~v~~al~~ 459 (588)
.+++++++|++|++.+||++|..
T Consensus 401 ~~~~i~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 401 KSFMIISGGVNIYPQETENALTM 423 (501)
T ss_pred cccceeECCeeeCHHHHHHHHHh
Confidence 99999999999999999999974
No 126
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.76 E-value=3.1e-07 Score=103.11 Aligned_cols=252 Identities=13% Similarity=0.063 Sum_probs=142.3
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCc---HHHHHHHHHHhCCCCeeccccccCccc-ceecCCCCC
Q 007815 276 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVNPSL 351 (588)
Q Consensus 276 ~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~---~~~~~~l~~~~g~~~v~~~~YgaSEg~-~~~~~~~~~ 351 (588)
.|...+.|++...+ + ....+. +.|+ ++.+.|- ..-.+.+.+.++.-||. +.||+||++ .-+...+..
T Consensus 338 ~pt~~r~l~~~~~~---~-~~~~~~-~sLk---~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~ 408 (626)
T KOG1175|consen 338 APTAYRLLRRLGQE---D-VTSYSL-KSLR---TCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGK 408 (626)
T ss_pred ccHHHHHHHHhccc---c-cccccc-ceEE---EEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCC
Confidence 35566656555332 1 111233 5688 7777762 33345566777433677 999999963 222222222
Q ss_pred -CCcccceeeccCc-eEEEEEeCCCCCcccccccCCCccccccccCCC-CeEEEEEccc------cceee----------
Q 007815 352 -PPELATFAVLPNI-GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVG-EEYEIIVTNV------AGLYR---------- 412 (588)
Q Consensus 352 -~~~~~~~~l~~~~-~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G-~~yELVvTt~------~Gl~R---------- 412 (588)
+. ..|..-.|.. ..++.++++ +. +++.+ +.+||+++.. .++|.
T Consensus 409 ~p~-~pg~~~~p~~g~~v~i~de~------------g~-----~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf 470 (626)
T KOG1175|consen 409 LPI-KPGSAGKPFPGYDVQILDEN------------GN-----ELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYF 470 (626)
T ss_pred CCc-CccccCCCCCCcceEEECCC------------CC-----CcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhc
Confidence 11 1122212222 334444432 12 44444 7899999652 33442
Q ss_pred ------cccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCce
Q 007815 413 ------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGH 486 (588)
Q Consensus 413 ------Yr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~ 486 (588)
|.|||-++.+ +.+.+.+.||.||+||+.|-+++..|||+||.+.-. +.|=.|+.-.....+.
T Consensus 471 ~k~pg~y~tGD~~~rd----~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~--------VaEsAvVg~p~~~~ge 538 (626)
T KOG1175|consen 471 KKFPGYYFTGDGGRRD----EDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPA--------VAESAVVGSPDPIKGE 538 (626)
T ss_pred ccCCceEEecCceEEc----CCceEEEEecccccccccceeecHHHHHHHHhhCcc--------hhheeeecCCCCCCCe
Confidence 9999999999 489999999999999999999999999999975421 2233333211111232
Q ss_pred EE-EEEEeccCCCHHHHHHHHHHHHHhccChhhHHHhhcCCcCCeE-EEEe---ccchHHHHHHHHhcCCCCCCCCCCCc
Q 007815 487 YV-IFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLE-LRVV---LKGTFQQILDHYLGLGAALSQFKTPR 561 (588)
Q Consensus 487 y~-~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R~~g~l~p~~-v~~v---~~gtf~~~~~~~~~~G~~~~Q~K~Pr 561 (588)
-+ .||=+..+ ....+++.++|..++ +...|-+.-|+ |.+| +.=..-+.+++.+++-.+..|++-.-
T Consensus 539 ~v~aFvvl~~g--~~~~~~L~kel~~~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~s 609 (626)
T KOG1175|consen 539 VVLAFVVLKSG--SHDPEQLTKELVKHV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTS 609 (626)
T ss_pred EEEEEEEEcCC--CCChHHHHHHHHHHH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCcccccc
Confidence 22 45545332 223333334444433 11233343333 4444 22234556666665544444899899
Q ss_pred ccCCCCHHHHHHHhcc
Q 007815 562 CVGPTNKTVLQILCNN 577 (588)
Q Consensus 562 ~~~~~~~~~~~~l~~~ 577 (588)
.+. |+++++.+.+.
T Consensus 610 t~~--dp~v~~~~~~~ 623 (626)
T KOG1175|consen 610 TLA--DPSVIDHLRSI 623 (626)
T ss_pred ccC--ChHHHHHHHHh
Confidence 999 99999998875
No 127
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.64 E-value=1.4e-06 Score=94.83 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=103.4
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeeEEeecCc--HHHHHHHHHHhCCCCeeccccccCccc-ceecCCCCCC
Q 007815 276 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM--EHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVNPSLP 352 (588)
Q Consensus 276 ~p~~A~~L~~~~~~~~g~~~~~~~lwP~L~~i~~~~~g~~--~~~~~~l~~~~g~~~v~~~~YgaSEg~-~~~~~~~~~~ 352 (588)
+-...+.+++..+. +|| -+.+||+ .+-.+++-..+=.||+. .+||-||.. -+...++++-
T Consensus 389 d~lVFkKIr~~lGG-------------~lR---~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~ 451 (678)
T KOG1180|consen 389 DALVFKKIRALLGG-------------NLR---YILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDF 451 (678)
T ss_pred HHHHHHHHHHHhCC-------------ceE---EEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhc
Confidence 34467777776542 688 7788886 33334444432146999 999999964 3444455442
Q ss_pred -CcccceeeccCceEEEEEeCCCCCcccccccCCCccccccccCCCCeEEEEEcc---cccee-----------------
Q 007815 353 -PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY----------------- 411 (588)
Q Consensus 353 -~~~~~~~l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~eve~G~~yELVvTt---~~Gl~----------------- 411 (588)
-+.+|-.+ ..+.+-+++.+ |.+ ..+. . .| =.|||+|+. ..|||
T Consensus 452 ~~g~vG~pl--~c~eiKLvdw~--EgG-----Y~~~-----~-~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~ 515 (678)
T KOG1180|consen 452 STGRVGAPL--PCCEIKLVDWE--EGG-----YFAK-----N-KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQR 515 (678)
T ss_pred ccccccCCc--cceEEEEEEhh--hcC-----ccCC-----C-CC-CCceEEecCCccChhhhCChhhhhhhceecCCcE
Confidence 12223222 23455556654 221 1111 0 11 267999966 35666
Q ss_pred ecccCCEEEEeceeCCCCEEEEEeecCceeee-eeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCC
Q 007815 412 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLS 481 (588)
Q Consensus 412 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~-~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~ 481 (588)
||+||||++++. .+++++++|++|.+++ +||-|+=.-||.++... + -+-+-|+++|..
T Consensus 516 WF~TGDIGe~~p----dG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~-p-------~V~NICvyAd~~ 574 (678)
T KOG1180|consen 516 WFRTGDIGEFHP----DGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSS-P-------YVDNICVYADSN 574 (678)
T ss_pred EEeccccceecC----CCcEEEeechhhhhhhcccceeehHHHHHHHhcC-c-------chhheEEecccc
Confidence 899999999995 7899999999999876 59999999999988753 1 133667888854
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.36 E-value=1.6e-05 Score=85.15 Aligned_cols=82 Identities=16% Similarity=0.256 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHh-cCCChhhhhc----CCCCCCChhhhhhcCCCcccccchHHHHHHhcCCCCCCccCCCcceeeccc
Q 007815 34 ERIQRETLRKILEE-NASAEYLQNL----GLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSS 108 (588)
Q Consensus 34 ~~~Q~~~L~~iL~~-~~~T~ygr~~----gf~~i~t~edf~~~vPi~~Yed~~p~ieR~~~Ge~~~ll~~~pi~~f~~TS 108 (588)
++...+.++++.+. .++++.||++ |+. .++.++. .+|.+--+-++. ..+.... .+.+.....||
T Consensus 30 ~~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~~-dIP~lPi~~FK~--~~L~S~~------~e~~~~~~tSS 98 (365)
T PF04443_consen 30 EELFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDLE-DIPFLPIRFFKE--HELLSVP------EEEVEKVFTSS 98 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccHH-HCCcchHHHHhh--ceeeecC------hhhheeEEECC
Confidence 44555666777775 7999999996 665 5566665 588777666663 1122221 23456778999
Q ss_pred cCCCCCcccccCChHHHHH
Q 007815 109 GTTQGKPKFLPFNDELMET 127 (588)
Q Consensus 109 GTT~G~~K~iP~t~~~~~~ 127 (588)
||| |.+-.|...+.....
T Consensus 99 GTt-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 99 GTT-GQPSRIFRDRETAER 116 (365)
T ss_pred CCC-CCCcEEEECHHHHHH
Confidence 999 887778777655543
No 129
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.16 E-value=6.7e-05 Score=82.23 Aligned_cols=223 Identities=15% Similarity=0.166 Sum_probs=131.8
Q ss_pred HHHHHHHHHHhCCCCeeccccccCccccee-cCCCCCCCccccee--eccCceEEEEEeCCCCCcccccccCCCcccccc
Q 007815 316 EHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPSLPPELATFA--VLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLT 392 (588)
Q Consensus 316 ~~~~~~l~~~~g~~~v~~~~YgaSEg~~~~-~~~~~~~~~~~~~~--l~~~~~~~Efip~~~~~~~~~~~~~~~~~l~~~ 392 (588)
+...+.+.+.|| .+..++.||+|||.+++ |.+...-+ .|+. +.....=++.|-.| +...|. --++.-+. .
T Consensus 369 ~diW~~Fv~RFg-~~~IgE~YgaTEgn~~~~N~d~~vGA--~G~~~~~~~~l~p~~LIk~D--~~t~E~-iRd~~G~C-i 441 (649)
T KOG1179|consen 369 PDIWQQFVKRFG-IIKIGEFYGATEGNSNLVNYDGRVGA--CGFMSRLLKLLYPFRLIKVD--PETGEP-IRDSQGLC-I 441 (649)
T ss_pred chHHHHHHHHcC-CCeEEEEeccccCcceeeeecCcccc--ccchhhhhhhccceEEEEec--CCCCce-eecCCceE-E
Confidence 445566777895 55444999999997644 44433211 1221 11111125666654 221100 00111122 2
Q ss_pred ccCCCCeEEEEE--------cccccee--------------------ecccCCEEEEeceeCCCCEEEEEeecCceeeee
Q 007815 393 EVKVGEEYEIIV--------TNVAGLY--------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 444 (588)
Q Consensus 393 eve~G~~yELVv--------Tt~~Gl~--------------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~ 444 (588)
.+++||.|.||- +.+-||- .|.|||+...+. -..+.|.+|.+|..--.
T Consensus 442 ~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~----~GylYF~DRtGDTFRWK 517 (649)
T KOG1179|consen 442 PCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADE----LGYLYFKDRTGDTFRWK 517 (649)
T ss_pred ECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEec----CCcEEEeccCCCceeec
Confidence 468999997773 2233432 499999999886 68999999999999999
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEee-cCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHhh
Q 007815 445 IDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHV-DLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARK 523 (588)
Q Consensus 445 Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~-~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R~ 523 (588)
||||+-.|||+.+..... + .++.-|-+.. ...++.+-=.+. . .+..+-++..+...+...| |.|+.=|-
T Consensus 518 GENVsTtEVe~~l~~~~~-~----~dv~VYGV~VP~~EGRaGMAaI~--~-~p~~~~d~~~l~~~l~~~L--P~YA~P~F 587 (649)
T KOG1179|consen 518 GENVSTTEVEDVLSALDF-L----QDVNVYGVTVPGYEGRAGMAAIV--L-DPTTEKDLEKLYQHLRENL--PSYARPRF 587 (649)
T ss_pred CCcccHHHHHHHHhhhcc-c----cceeEEEEecCCccCccceEEEE--e-cCcccchHHHHHHHHHhhC--ccccchHH
Confidence 999999999998886522 1 1122333322 222222222222 1 1222335566666676665 77877665
Q ss_pred cCCcCCeEEEEeccchHHHHHHHHhcCCCCCCCCCCCccc
Q 007815 524 VNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCV 563 (588)
Q Consensus 524 ~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~ 563 (588)
.....-.+ .-|||.......+..|-.+++++-|--+
T Consensus 588 lRl~~~i~----~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 588 LRLQDEIE----KTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HHHHhhhh----cccchhhHHHHHHHccCCccccCCceEE
Confidence 54333333 4599996666666779899999988754
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.40 E-value=0.006 Score=69.91 Aligned_cols=63 Identities=17% Similarity=0.358 Sum_probs=51.4
Q ss_pred ccCCCCeEEEEEccc---ccee--------------ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHH
Q 007815 393 EVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 455 (588)
Q Consensus 393 eve~G~~yELVvTt~---~Gl~--------------RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~ 455 (588)
.+..|..+|+.|+.. .||+ .|+|||+++-. ....++|.||.++.+++.|..|-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 456788899999773 4433 39999999944 36799999999999999999998899988
Q ss_pred HHHH
Q 007815 456 SVDE 459 (588)
Q Consensus 456 al~~ 459 (588)
++..
T Consensus 637 ~l~~ 640 (642)
T COG1020 637 ALAE 640 (642)
T ss_pred HHhc
Confidence 7753
No 131
>PTZ00297 pantothenate kinase; Provisional
Probab=96.79 E-value=0.022 Score=71.06 Aligned_cols=56 Identities=9% Similarity=0.077 Sum_probs=39.3
Q ss_pred eEEEEEccccceeecccCCEEEEeceeCCCCEEEEEeecCceeee-eeeecCHHHHHHHHHH
Q 007815 399 EYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSVDE 459 (588)
Q Consensus 399 ~yELVvTt~~Gl~RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~-~Gekv~e~~v~~al~~ 459 (588)
.|||++... +- .-.|+++. +++. ..+.++|+||+|++++. +||+|++..||+++..
T Consensus 825 ~GEIlvr~~-kd-pe~T~e~~--~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLAKK-GE-PRRTLPIA--AQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEEEC-CC-hHHHHHhh--CcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 588988311 00 12366642 3442 46799999999999776 5999999999999864
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.02 E-value=0.0066 Score=52.49 Aligned_cols=82 Identities=12% Similarity=0.053 Sum_probs=51.2
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCC--HHHHHHHHHHHHHhccChhhHHHh
Q 007815 445 IDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVN--DEVLKECCNCLDRSFVDAGYVSAR 522 (588)
Q Consensus 445 Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~--~~~l~~~~~~ld~~L~n~~Y~~~R 522 (588)
|.||+|.+|+++|.+. + ++. .+|.+........-+..+.||...+.. ....+++.+.+.++|
T Consensus 1 GvnvfP~~Ie~vl~~~-~-----~~~-~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~l--------- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P-----EVS-PEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERL--------- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T-----TEE-EEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHH---------
T ss_pred CcEECHHHHHHHHHhC-c-----CCC-CcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHH---------
Confidence 7899999999999875 2 221 278877653333456668899866532 245667777777766
Q ss_pred hcCCcCCeEEEEeccchHHH
Q 007815 523 KVNAIGPLELRVVLKGTFQQ 542 (588)
Q Consensus 523 ~~g~l~p~~v~~v~~gtf~~ 542 (588)
+...--.++|.+|++|++++
T Consensus 65 k~~lgv~~~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 KERLGVRPEVELVPPGTLPR 84 (96)
T ss_dssp HHHHSS-EEEEEE-TT-S--
T ss_pred HhhcCceEEEEEECCCCccC
Confidence 33222345999999999986
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=95.74 E-value=0.095 Score=56.39 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=34.3
Q ss_pred ecccCCEEEEeceeCCCCEEEEEeecCceeeeee---eecCHHHHHHHHHHH
Q 007815 412 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINI---DKNTEKDLQLSVDEA 460 (588)
Q Consensus 412 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~G---ekv~e~~v~~al~~~ 460 (588)
||+|||++++.+ ..+.+.|+||.+ +| +||++. ||+++.+.
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhC
Confidence 899999999842 268899999998 78 899999 99888864
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=73.38 E-value=6.5 Score=47.65 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=40.8
Q ss_pred ecccCCEEEEeceeCCCCEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 007815 412 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 460 (588)
Q Consensus 412 RYr~GDvv~v~~~~~~~P~i~f~gR~~d~i~~~Gekv~e~~v~~al~~~ 460 (588)
.|||||.++..- ..-++|.||.++.++++|.++.=.++..++..-
T Consensus 455 ~y~tgD~gr~l~----ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSLK----NGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceeec----CCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 499999998873 578999999999999999999999999998875
No 135
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=58.46 E-value=56 Score=27.88 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhc
Q 007815 450 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSF 513 (588)
Q Consensus 450 e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L 513 (588)
+..+..++..+.. .|+.+......+. ...++.|.+|||+.+. ....++.+.+.|.+.+
T Consensus 25 pGsL~~vL~~Fa~----~~INLt~IeSRP~-~~~~~~Y~FfVDieg~-~~~~~~~~l~~L~~~~ 82 (90)
T cd04931 25 VGALAKVLRLFEE----KDINLTHIESRPS-RLNKDEYEFFINLDKK-SAPALDPIIKSLRNDI 82 (90)
T ss_pred CcHHHHHHHHHHH----CCCCEEEEEeccC-CCCCceEEEEEEEEcC-CCHHHHHHHHHHHHHh
Confidence 4457677766643 7888877766553 3356789999999765 3345555556666554
No 136
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=55.49 E-value=11 Score=42.91 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=22.3
Q ss_pred CCcceeeccccCCCCCcccccCChHHHH
Q 007815 99 KPITTISRSSGTTQGKPKFLPFNDELME 126 (588)
Q Consensus 99 ~pi~~f~~TSGTT~G~~K~iP~t~~~~~ 126 (588)
+.+.+...||||| |+||-+..|...+.
T Consensus 193 ~d~a~i~yTSGTT-G~PKgV~~sh~~l~ 219 (612)
T PRK12476 193 DDVSHLQYTSGST-RPPVGVEITHRAVG 219 (612)
T ss_pred CceEEEEeCCCCC-CCCceEEeeHHHHH
Confidence 3455788899999 99999999987664
No 137
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=52.13 E-value=89 Score=38.28 Aligned_cols=127 Identities=20% Similarity=0.169 Sum_probs=79.9
Q ss_pred ccCCCCeEEEEEccccc---------------------------eeecccCCEEEEeceeC------CCCEEEEEeecCc
Q 007815 393 EVKVGEEYEIIVTNVAG---------------------------LYRYRLGDVVKVMGFHN------STPELKFICRRNL 439 (588)
Q Consensus 393 eve~G~~yELVvTt~~G---------------------------l~RYr~GDvv~v~~~~~------~~P~i~f~gR~~d 439 (588)
....|+.||+.+.+..+ .-+=||||++=+....+ ..+.+-++|=.+.
T Consensus 1174 pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~E 1253 (1363)
T KOG3628|consen 1174 PCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDE 1253 (1363)
T ss_pred ccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccc
Confidence 45679999999966433 22468899865443332 3467888999999
Q ss_pred eeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHH-HHhccChhh
Q 007815 440 LLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCL-DRSFVDAGY 518 (588)
Q Consensus 440 ~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~l-d~~L~n~~Y 518 (588)
-+-++|=.-++.+||..|..+-+.. .|+.+ |+ -.+..++.+|..++. .+.++.-.+ ...| +.
T Consensus 1254 tlEl~GL~h~p~DIE~TV~~vH~~I--~~cav--F~-------~~glvVvviE~~gq~---~~~~LvPlIv~~vL-~e-- 1316 (1363)
T KOG3628|consen 1254 TLELNGLRHFPSDIETTVERVHPSI--GGCAV--FQ-------ATGLVVVVIECHGQQ---ELADLVPLIVNVVL-EE-- 1316 (1363)
T ss_pred eeeecCcccCcchHHHHHHHhcccc--cceee--Ee-------eCCeEEEEEEecCch---hHhhhhHHHHHHHH-hh--
Confidence 9999999999999999999986532 12211 22 135677889986532 222221111 1122 22
Q ss_pred HHHhhcCCcCCeEEEEeccchHHH
Q 007815 519 VSARKVNAIGPLELRVVLKGTFQQ 542 (588)
Q Consensus 519 ~~~R~~g~l~p~~v~~v~~gtf~~ 542 (588)
.+.| -=-|.+|++|.|.+
T Consensus 1317 -----H~iI-~dvV~fV~~G~~p~ 1334 (1363)
T KOG3628|consen 1317 -----HYII-LDVVAFVDKGVFPR 1334 (1363)
T ss_pred -----cceE-EEEEEEecCCcccc
Confidence 2223 23588899999874
No 138
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=46.18 E-value=1.3e+02 Score=23.92 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007815 451 KDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 511 (588)
Q Consensus 451 ~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 511 (588)
..+.+++..+. ..|+.+..-...+. ...++.|.+|+|+.+..+....+.+.+.|.+
T Consensus 11 G~L~~vL~~f~----~~~vni~~I~Srp~-~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~ 66 (75)
T cd04880 11 GALAKALKVFA----ERGINLTKIESRPS-RKGLWEYEFFVDFEGHIDDPDVKEALEELKR 66 (75)
T ss_pred CHHHHHHHHHH----HCCCCEEEEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 34555555443 47888887755543 3356889999999765344455555555544
No 139
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=43.37 E-value=13 Score=41.90 Aligned_cols=31 Identities=26% Similarity=0.488 Sum_probs=21.7
Q ss_pred CCCCe----EEEEEccccc--eeecccCCEEEEecee
Q 007815 395 KVGEE----YEIIVTNVAG--LYRYRLGDVVKVMGFH 425 (588)
Q Consensus 395 e~G~~----yELVvTt~~G--l~RYr~GDvv~v~~~~ 425 (588)
+.|.. |-|++-.--| |++=||||..|=.|..
T Consensus 484 kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 484 KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGEN 520 (649)
T ss_pred ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCc
Confidence 56664 4555666677 4477999999988864
No 140
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=42.10 E-value=1.2e+02 Score=26.39 Aligned_cols=100 Identities=11% Similarity=0.161 Sum_probs=53.0
Q ss_pred EEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHh
Q 007815 433 FICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRS 512 (588)
Q Consensus 433 f~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~ 512 (588)
++-|.+.--.+..+. ....+.+.+...+. +.++++.+|++.+| |+.++++..++. .+.++...+...
T Consensus 8 iv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~~~~---~is~~~~~lK~~ 74 (121)
T PF01797_consen 8 IVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIPPKQ---SISKFMQRLKGR 74 (121)
T ss_dssp EEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE-TTS----HHHHHHHHHHH
T ss_pred EEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeecccc---cchheeeccccc
Confidence 344444333333333 45556666666665 57999999998755 999999985432 344555545442
Q ss_pred c---cChhhHHHhhc----CCc--CCeEEEEeccchHHHHHH
Q 007815 513 F---VDAGYVSARKV----NAI--GPLELRVVLKGTFQQILD 545 (588)
Q Consensus 513 L---~n~~Y~~~R~~----g~l--~p~~v~~v~~gtf~~~~~ 545 (588)
. .|..|...... |.+ ..--...+....+....+
T Consensus 75 ~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~ 116 (121)
T PF01797_consen 75 SSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIR 116 (121)
T ss_dssp HHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHH
T ss_pred ccccccccccceecccccccccccCCeEEEEECChhHHHHHH
Confidence 2 24333333211 222 223455555555555443
No 141
>PRK07798 acyl-CoA synthetase; Validated
Probab=40.44 E-value=13 Score=40.94 Aligned_cols=23 Identities=30% Similarity=0.345 Sum_probs=19.6
Q ss_pred eeeccccCCCCCcccccCChHHHH
Q 007815 103 TISRSSGTTQGKPKFLPFNDELME 126 (588)
Q Consensus 103 ~f~~TSGTT~G~~K~iP~t~~~~~ 126 (588)
+...||||| |.||-+..|...+.
T Consensus 167 ~i~~TSGTT-G~PK~v~~s~~~~~ 189 (533)
T PRK07798 167 YLLYTGGTT-GMPKGVMWRQEDIF 189 (533)
T ss_pred EEEECCCCC-CCCcEEEEecHHHH
Confidence 667799999 99999999987653
No 142
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=38.57 E-value=76 Score=29.55 Aligned_cols=56 Identities=20% Similarity=0.258 Sum_probs=37.5
Q ss_pred cCCCCeEEEEEcc--ccceeec----ccCCEEEEeceeCCCCEEEEEee----cCceeeeeeeecCHH
Q 007815 394 VKVGEEYEIIVTN--VAGLYRY----RLGDVVKVMGFHNSTPELKFICR----RNLLLTINIDKNTEK 451 (588)
Q Consensus 394 ve~G~~yELVvTt--~~Gl~RY----r~GDvv~v~~~~~~~P~i~f~gR----~~d~i~~~Gekv~e~ 451 (588)
|++|+.-+|.||. ++|.+++ .++|+=.|.+- -.|+|.|.+. .+.+|.-+-|+++.-
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkdi--~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm 112 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKDI--YPPRIELSYTLTDADGKVIKQGEEKLKDM 112 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEccC--CCCcEEEEEEEECCCCcEEEecceEEecc
Confidence 7899999999999 4997765 44565444443 3588877665 345555555666544
No 143
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=37.77 E-value=2.2e+02 Score=23.04 Aligned_cols=55 Identities=22% Similarity=0.253 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007815 452 DLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 511 (588)
Q Consensus 452 ~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 511 (588)
.+.+++.-+. +.|+.+..-...+. ......|.++++..+..+...++.+.+.|++
T Consensus 14 ~L~~il~~f~----~~~ini~~i~s~p~-~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~ 68 (80)
T cd04905 14 ALYDVLGVFA----ERGINLTKIESRPS-KGGLWEYVFFIDFEGHIEDPNVAEALEELKR 68 (80)
T ss_pred HHHHHHHHHH----HCCcCEEEEEEEEc-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4545554443 47888776665544 2345779999998765344555555555554
No 144
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=35.32 E-value=2e+02 Score=23.16 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHH
Q 007815 450 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLD 510 (588)
Q Consensus 450 e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld 510 (588)
+..+.+++..+. ..|+.+..--..+. ...+..|.+|||+.+. + +..+++.+.|.
T Consensus 11 pG~L~~vL~~f~----~~~iNlt~IeSRP~-~~~~~~y~Ffvd~~~~-~-~~~~~~l~~L~ 64 (74)
T cd04904 11 VGALARALKLFE----EFGVNLTHIESRPS-RRNGSEYEFFVDCEVD-R-GDLDQLISSLR 64 (74)
T ss_pred CcHHHHHHHHHH----HCCCcEEEEECCCC-CCCCceEEEEEEEEcC-h-HHHHHHHHHHH
Confidence 445666666554 47887776655543 3456889999999762 2 23444444443
No 145
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=33.54 E-value=38 Score=26.08 Aligned_cols=19 Identities=26% Similarity=0.714 Sum_probs=15.2
Q ss_pred cccCCEEEEeceeCCCCEEEEE
Q 007815 413 YRLGDVVKVMGFHNSTPELKFI 434 (588)
Q Consensus 413 Yr~GDvv~v~~~~~~~P~i~f~ 434 (588)
|.+||+|+..+ +.|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999997 57876655
No 146
>COG5475 Uncharacterized small protein [Function unknown]
Probab=33.06 E-value=47 Score=25.81 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=20.2
Q ss_pred cccCCEEEEeceeCCCCEEEEEeecCc
Q 007815 413 YRLGDVVKVMGFHNSTPELKFICRRNL 439 (588)
Q Consensus 413 Yr~GDvv~v~~~~~~~P~i~f~gR~~d 439 (588)
|.|||+|++.. ..|++.+.+=..|
T Consensus 5 FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEeec---CCceEEEeccccC
Confidence 78999999997 6899988887664
No 147
>PRK11899 prephenate dehydratase; Provisional
Probab=33.05 E-value=3.4e+02 Score=28.22 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007815 450 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 511 (588)
Q Consensus 450 e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 511 (588)
+..+-++|..+.. .|+.+......+. ...++.|.+|||+.+.......++..+.|.+
T Consensus 205 pGaL~~vL~~Fa~----~gINLtkIeSRP~-~~~~~~Y~F~id~eg~~~d~~v~~aL~~l~~ 261 (279)
T PRK11899 205 PAALYKALGGFAT----NGVNMTKLESYMV-GGSFTATQFYADIEGHPEDRNVALALEELRF 261 (279)
T ss_pred CChHHHHHHHHHH----cCCCeeeEEeeec-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4567677776654 6887777766653 3457899999999876443444444444443
No 148
>PRK11898 prephenate dehydratase; Provisional
Probab=30.33 E-value=3.5e+02 Score=28.08 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007815 450 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 511 (588)
Q Consensus 450 e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 511 (588)
+..+-++|..+.. .|+.+...-..+ ....++.|.+|||+.+..+...++...+.|.+
T Consensus 208 pGsL~~~L~~F~~----~~INLt~IeSRP-~~~~~~~y~F~vd~eg~~~~~~~~~al~~L~~ 264 (283)
T PRK11898 208 PGALYKALSEFAW----RGINLTRIESRP-TKTGLGTYFFFIDVEGHIDDVLVAEALKELEA 264 (283)
T ss_pred ccHHHHHHHHHHH----CCCCeeeEeccc-CCCCCccEEEEEEEEccCCCHHHHHHHHHHHH
Confidence 4567777776644 788787666554 33456889999999776554445555455543
No 149
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=30.28 E-value=3.4e+02 Score=28.24 Aligned_cols=56 Identities=23% Similarity=0.386 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHH
Q 007815 450 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLD 510 (588)
Q Consensus 450 e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld 510 (588)
+..+..+|..++ +.|+.+.-.-..+ ....++.|.+|||+.+..+....++..+.|.
T Consensus 205 PGaL~~~L~~Fa----~~gINlTkIESRP-~k~~~~~Y~F~iD~eg~~~~~~v~~AL~el~ 260 (279)
T COG0077 205 PGALYKALGVFA----KRGINLTKIESRP-LKTGLGEYLFFIDIEGHIDDPLVKEALEELK 260 (279)
T ss_pred CchHHHHHHHHH----HcCcceeeEeecc-cCCCCeeEEEEEEEecCcCcHhHHHHHHHHH
Confidence 445656666553 5787666554443 3346789999999977655444444444443
No 150
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=28.23 E-value=42 Score=29.00 Aligned_cols=34 Identities=21% Similarity=0.472 Sum_probs=17.2
Q ss_pred ecccCCEEEEe---ceeCCCCEEEEEeecCceeeeee
Q 007815 412 RYRLGDVVKVM---GFHNSTPELKFICRRNLLLTINI 445 (588)
Q Consensus 412 RYr~GDvv~v~---~~~~~~P~i~f~gR~~d~i~~~G 445 (588)
-|..||.|.++ +++...|-=+|.||++-++...|
T Consensus 32 ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g 68 (98)
T COG2139 32 EYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRG 68 (98)
T ss_pred hccCCCEEEEEeCcccccCCCCccccCcceEEEeccC
Confidence 35556655554 23334455555566555544443
No 151
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=27.35 E-value=44 Score=29.14 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=24.3
Q ss_pred ecccCCEEEEecee---CCCCEEEEEeecCceeeeee
Q 007815 412 RYRLGDVVKVMGFH---NSTPELKFICRRNLLLTINI 445 (588)
Q Consensus 412 RYr~GDvv~v~~~~---~~~P~i~f~gR~~d~i~~~G 445 (588)
-|+.||.|-+.... .+.|.=.|.||++-++++.|
T Consensus 34 ~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~ 70 (98)
T PRK04306 34 EFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRG 70 (98)
T ss_pred hccCCCEEEEEecCceecCCccccccCCCEEEEeecC
Confidence 48888888777522 35677778888887777765
No 152
>PRK13390 acyl-CoA synthetase; Provisional
Probab=25.38 E-value=34 Score=37.64 Aligned_cols=19 Identities=42% Similarity=0.441 Sum_probs=15.7
Q ss_pred ceeeccccCCCCCcccccCC
Q 007815 102 TTISRSSGTTQGKPKFLPFN 121 (588)
Q Consensus 102 ~~f~~TSGTT~G~~K~iP~t 121 (588)
.+...||||| |.||-+..+
T Consensus 151 a~i~~TSGTT-G~PKgV~~~ 169 (501)
T PRK13390 151 AVMLYSSGTT-GFPKGIQPD 169 (501)
T ss_pred EEEEeCCCCC-CCCCEEEee
Confidence 4667799999 999998743
No 153
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=24.76 E-value=59 Score=30.83 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=24.9
Q ss_pred ecccCCEEEEec---eeCCCCEEEEEeecCceeeeee
Q 007815 412 RYRLGDVVKVMG---FHNSTPELKFICRRNLLLTINI 445 (588)
Q Consensus 412 RYr~GDvv~v~~---~~~~~P~i~f~gR~~d~i~~~G 445 (588)
-|+.||+|.+.. .+.+.|.=.|.||++-+.++.|
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~ 69 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTP 69 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 488888887775 3335677778888887777765
No 154
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=23.98 E-value=45 Score=33.47 Aligned_cols=46 Identities=17% Similarity=0.374 Sum_probs=30.8
Q ss_pred CCCcceeeccccCCCCCcccccCC-hH-HHHHHHHHHHHHHHHHhccCC
Q 007815 98 GKPITTISRSSGTTQGKPKFLPFN-DE-LMETTLQIFRTSYAFRNREFP 144 (588)
Q Consensus 98 ~~pi~~f~~TSGTT~G~~K~iP~t-~~-~~~~~~~~~~~~~~~~~~~~p 144 (588)
.-.+..|.+|||++ |-.-++|.. .. .......+.......+.+..|
T Consensus 124 ~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~fa~~iA~~l~~~~P 171 (223)
T cd04866 124 ALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRLFTEFIAEYLCQQFP 171 (223)
T ss_pred HcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 34567899999999 999999999 43 233333333344555666677
No 155
>PF12401 DUF3662: Protein of unknown function (DUF2662) ; InterPro: IPR022128 This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with PF00498 from PFAM. ; PDB: 2LC0_A.
Probab=22.90 E-value=92 Score=27.86 Aligned_cols=85 Identities=16% Similarity=0.147 Sum_probs=36.8
Q ss_pred eeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHHhccChhhHHHhh
Q 007815 444 NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARK 523 (588)
Q Consensus 444 ~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~~L~n~~Y~~~R~ 523 (588)
.+-.|-+.||..+|.+.+.. ++.. +-.+..--|-+|++.+ +.. +-+.+..+...|.++|...-.+..++
T Consensus 20 F~~~vqPvEIa~~L~remd~----~a~~----~~~~r~~aPN~y~V~L--s~~-D~~~l~~~~~~l~~el~~~l~~~a~~ 88 (116)
T PF12401_consen 20 FRSEVQPVEIAKALRREMDD----QARV----VSRGRTLAPNVYTVEL--SPE-DYERLSPWGDRLARELADYLAEHARE 88 (116)
T ss_dssp HTTSS-THHHHHHHHHHHHH----T-B-------TT--B---EEEEEE--EHH-HHHHH-S-SHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHHh----CCee----cCCCCEEcCeeEEEEE--CHH-HHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 45558899999999998762 2111 1111111356888444 221 11112111123333331222333344
Q ss_pred cC--CcCCeEEEEeccch
Q 007815 524 VN--AIGPLELRVVLKGT 539 (588)
Q Consensus 524 ~g--~l~p~~v~~v~~gt 539 (588)
.| ..+|+.|++.....
T Consensus 89 qgy~~~G~v~V~~~~d~~ 106 (116)
T PF12401_consen 89 QGYTFVGPVTVEFEEDPD 106 (116)
T ss_dssp HT-B-SS--EEEEEEETT
T ss_pred CCCeecCCEEEEEEECCC
Confidence 44 68999999987654
No 156
>cd04861 LigD_Pol_like LigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. PaeLigD is monomeric, containing an N-terminal phosphoesterase module, a central polymerase (Pol) domain, and a C-terminal ATP-dependent ligase domain. Mycobacterium tuberculosis (Mt)LigD, also found in this group, is monomeric and contains the same modules but these are arranged differently: an N-terminal Pol domain, a central phosphoesterase module, and a C-terminal ligase domain. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase do
Probab=22.82 E-value=49 Score=33.30 Aligned_cols=45 Identities=13% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCcceeeccccCCCCCcccccCChHH-HHHHHHHHHHHHHHHhccCC
Q 007815 99 KPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFRNREFP 144 (588)
Q Consensus 99 ~pi~~f~~TSGTT~G~~K~iP~t~~~-~~~~~~~~~~~~~~~~~~~p 144 (588)
-.+..|.+|||++ |-.-++|..... .+....+.......+.+.+|
T Consensus 130 lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~fa~~iA~~l~~~~P 175 (227)
T cd04861 130 LGLESFPKTSGGK-GLHVYVPLAPRYTWDEVRAFAKALARELARRLP 175 (227)
T ss_pred cCCccceEccCCC-eEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 4467899999999 999999999643 33333333444556677777
No 157
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=22.69 E-value=2.3e+02 Score=31.57 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=48.2
Q ss_pred EeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEE
Q 007815 434 ICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW 491 (588)
Q Consensus 434 ~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~v 491 (588)
..-.+.++++-|--+-..+-+.++.+..+.|.+.|+++ .|.+|+-....|+|-.+++
T Consensus 303 l~~A~~ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V-~faIHPVAGRMPGHMNVLL 359 (462)
T PRK09444 303 LKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINV-RFGIHPVAGRLPGHMNVLL 359 (462)
T ss_pred HHhCCcEEEECChHHHHHHHHHHHHHHHHHHHHCCCeE-EEEeccccccCCCcceeEE
Confidence 33456788889999999999999999999998889988 5999988777899998554
No 158
>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional
Probab=22.60 E-value=5.5e+02 Score=27.93 Aligned_cols=58 Identities=9% Similarity=0.136 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEEEeccCCCHHHHHHHHHHHHH
Q 007815 449 TEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 511 (588)
Q Consensus 449 ~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~vE~~~~~~~~~l~~~~~~ld~ 511 (588)
.+..+-++|..+.. .|+.+..--..+ ....++.|.+|||+.+.......+...+.|.+
T Consensus 307 ~pGaL~~~L~~Fa~----~giNLtkIeSRP-~~~~~~~Y~Ffid~eg~~~d~~~~~aL~~l~~ 364 (386)
T PRK10622 307 QAGALVEALLVLRN----HNLIMTKLESRP-IHGNPWEEMFYLDVQANLRSAEMQKALKELGE 364 (386)
T ss_pred CCcHHHHHHHHHHH----cCCCeeEEEeee-cCCCCceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34566677766644 688777665554 34467899999999876444444444444544
No 159
>TIGR02778 ligD_pol DNA polymerase LigD, polymerase domain. DNA repair of double-stranded breaks by non-homologous end joining (NHEJ) is accomplished by a two-protein system that is present in a minority of prokaryotes. One component is the Ku protein (see TIGR02772), which binds DNA ends. The other is a DNA ligase, a protein that is a multidomain polypeptide in most of those bacteria that have NHEJ, a permuted polypeptide in Mycobacterium tuberculosis and a few other species, and the product of tandem genes in some other bacteria. This model represents the polymerase domain.
Probab=21.44 E-value=55 Score=33.31 Aligned_cols=46 Identities=13% Similarity=0.283 Sum_probs=31.6
Q ss_pred CCCcceeeccccCCCCCcccccCChHH-HHHHHHHHHHHHHHHhccCC
Q 007815 98 GKPITTISRSSGTTQGKPKFLPFNDEL-METTLQIFRTSYAFRNREFP 144 (588)
Q Consensus 98 ~~pi~~f~~TSGTT~G~~K~iP~t~~~-~~~~~~~~~~~~~~~~~~~p 144 (588)
.-.+..|.+|||++ |-.-++|..... .++...+-......+.+.+|
T Consensus 145 ~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~r~fa~~iA~~l~~~~P 191 (245)
T TIGR02778 145 ELGLESFVKTSGGK-GLHVYVPLRPTLSWDEVKDFAKALAQALAQQMP 191 (245)
T ss_pred HcCCccceEccCCC-eEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCc
Confidence 34467899999999 999999999743 33333333344555667777
No 160
>PRK13391 acyl-CoA synthetase; Provisional
Probab=20.54 E-value=84 Score=34.66 Aligned_cols=19 Identities=47% Similarity=0.529 Sum_probs=15.2
Q ss_pred ceeeccccCCCCCcccccCC
Q 007815 102 TTISRSSGTTQGKPKFLPFN 121 (588)
Q Consensus 102 ~~f~~TSGTT~G~~K~iP~t 121 (588)
.+...||||| |.||-+-.+
T Consensus 157 a~il~TSGtT-G~PKgv~~~ 175 (511)
T PRK13391 157 TDMLYSSGTT-GRPKGIKRP 175 (511)
T ss_pred cEEEECCCCC-CCCCEEEEc
Confidence 4677899999 999987643
No 161
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=20.38 E-value=1.4e+02 Score=32.28 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=48.1
Q ss_pred EeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCCeeEeeEEeecCCCCCceEEEEE
Q 007815 434 ICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW 491 (588)
Q Consensus 434 ~gR~~d~i~~~Gekv~e~~v~~al~~~~~~l~~~g~~l~~f~~~~~~~~~~~~y~~~v 491 (588)
..-.+.+|++-|.-....|-+.++.+....|++.|+++. |.+++-....|+|-.+++
T Consensus 305 l~nA~sVIIvPGYGmAVAQAQh~v~E~~~~L~~~Gv~Vr-faIHPVAGRmPGHMNVLL 361 (463)
T COG1282 305 LKNASSVIIVPGYGMAVAQAQHPVAEITEKLRARGVNVR-FAIHPVAGRMPGHMNVLL 361 (463)
T ss_pred HhCCCeEEEecCchHHHHhhhhHHHHHHHHHHhcCCeee-EeecccccCCCcchhhhh
Confidence 344577888999999999999999999999988999985 999887777899987554
No 162
>PF12101 DUF3577: Protein of unknown function (DUF3577); InterPro: IPR021960 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.
Probab=20.30 E-value=77 Score=29.31 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=30.9
Q ss_pred eeecccCCEEEEe-----ceeCCCCEEEEEeec--CceeeeeeeecCHHH
Q 007815 410 LYRYRLGDVVKVM-----GFHNSTPELKFICRR--NLLLTINIDKNTEKD 452 (588)
Q Consensus 410 l~RYr~GDvv~v~-----~~~~~~P~i~f~gR~--~d~i~~~Gekv~e~~ 452 (588)
|..|++||+---. |.+.+.+...+-||- =.+|+++||.|++.+
T Consensus 81 li~FrlgDl~~d~f~~~~G~~~Ge~g~sLKgRLl~i~~iKVdge~Vy~~~ 130 (137)
T PF12101_consen 81 LIGFRLGDLWADTFTYKKGERAGEPGASLKGRLLKIKWIKVDGELVYKAE 130 (137)
T ss_pred EEEEEecCCceeeEEeccCCcCCccceeeEEEEEEEEEEEECCEEEecCC
Confidence 7788888874211 333356788999995 467999999998764
Done!