BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007818
(588 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/590 (64%), Positives = 465/590 (78%), Gaps = 2/590 (0%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMR 60
M I GLI FA SRLIAFCA+SES+ LDY KIL ++NPN FSWNV IRGF E+ +
Sbjct: 76 MIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPK 135
Query: 61 EAVDLYKQMLRNG--GTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHN 118
E+ LYKQMLR+G +RPD+FTYP+LFKVCA L L LG+ I GHVLKL ++ +VHN
Sbjct: 136 ESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHN 195
Query: 119 AVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEP 178
A IH+F SCGD+ A VFDES VR+LVSWN LING+ + G +AI +++ M+ E V+P
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 179 DEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIF 238
D+VTMIG+VS+C+ L DLN G+E + Y+ E+GL +T+PL NALMDM+ KCG + A IF
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 239 DSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALA 298
D++ +T+VS TTMI GYA+ G LD++RK+FDD+ EK VV WNA+IGG VQAKR ++ALA
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 299 LFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYA 358
LF EMQ + KPD +T +HCLSACSQLGALD GIWIHR+IEK + +LNV LGT+LVDMYA
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 359 KCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLG 418
KCGNI++AL VFH + RNSLTYTAIIGGLALHG A AISYF+EMI G+ PDEITF+G
Sbjct: 436 KCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 419 ILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMA 478
+LSACCHGG++ GR YF+QM S F L+P+LKHYS MVDLLGR+GLLEEA++L+ SMPM
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPME 555
Query: 479 ADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVR 538
AD VWGAL F CR+HGNV +GE+AA KLLELDP DSGIYVLL MY ++NMWE+A + R
Sbjct: 556 ADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRAR 615
Query: 539 KMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTRHF 588
+MM ERGVEK PGCSSIEVNG++ EFIVRDKS PE E+IYD L L RH
Sbjct: 616 RMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHM 665
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/579 (40%), Positives = 368/579 (63%), Gaps = 1/579 (0%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMR 60
M TG S ++ S+L A A+S +L+Y K+ + PNSF+WN IR +
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPV 112
Query: 61 EAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAV 120
++ + M+ P+ +T+P L K A + LG + G +K D++V N++
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172
Query: 121 IHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDE 180
IH + SCGDL AC VF +++VSWNS+INGFV+ G P +A+ LF+ M+ E V+
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 181 VTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDS 240
VTM+G++SACA++ +L GR++ YI E+ + + + LANA++DMY KCG +E A+ +FD+
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 241 MVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALF 300
M K V+ TTM+ GYA + AR++ + +P+K +V WNA+I Y Q + EAL +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 301 HEMQ-ATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAK 359
HE+Q +K + +T V LSAC+Q+GAL+ G WIH +I+K +N + +AL+ MY+K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 360 CGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGI 419
CG++ K+ +VF+ + +R+ ++A+IGGLA+HG +A+ F +M + P+ +TF +
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 420 LSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAA 479
AC H GLVDE F QM S + + P+ KHY+C+VD+LGRSG LE+A + I +MP+
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532
Query: 480 DVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRK 539
VWGAL AC++H N+++ E A +LLEL+P++ G +VLL+N+Y WE ++RK
Sbjct: 533 STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRK 592
Query: 540 MMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIY 578
M G++K PGCSSIE++G+++EF+ D +HP E++Y
Sbjct: 593 HMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 362/587 (61%), Gaps = 7/587 (1%)
Query: 7 ISHGFAPS-----RLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMRE 61
I+ G AP+ +L F ++ Y K+ + P+ WN I+G+ + E
Sbjct: 58 ITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGE 117
Query: 62 AVDLYKQMLRNGGTRPDNFTYPLLFK-VCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAV 120
V LY ML+ G T PD+ T+P L + G G ++ HV+K G ++YV NA+
Sbjct: 118 GVRLYLNMLKEGVT-PDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNAL 176
Query: 121 IHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDE 180
+ ++ CG + +A VFD C ++ SWN +I+G+ R E+I L +M+ V P
Sbjct: 177 VKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTS 236
Query: 181 VTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDS 240
VT++ ++SAC++++D +L + +H Y+SE ++ L NAL++ Y CG+++ A IF S
Sbjct: 237 VTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRS 296
Query: 241 MVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALF 300
M + V+S T+++ GY + G L +AR FD +P + + W +I GY++A E+L +F
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 301 HEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKC 360
EMQ+ G+ PD T V L+AC+ LG+L+ G WI +I+K +VV+G AL+DMY KC
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 361 GNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGIL 420
G KA +VFH+M +R+ T+TA++ GLA +G+ +AI F +M + + PD+IT+LG+L
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVL 476
Query: 421 SACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAAD 480
SAC H G+VD+ RK+FA+M S R+ P L HY CMVD+LGR+GL++EA +++R MPM +
Sbjct: 477 SACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPN 536
Query: 481 VVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKM 540
+VWGAL A RLH + + E AA K+LEL+P + +Y LL N+Y W++ +VR+
Sbjct: 537 SIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRK 596
Query: 541 MEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTRH 587
+ + ++KTPG S IEVNG +EF+ DKSH + E+IY L +L +
Sbjct: 597 IVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/618 (38%), Positives = 360/618 (58%), Gaps = 66/618 (10%)
Query: 1 MTITGLISHGFAPSRLIAFCAISES-KNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKM 59
M GL + +A S+LI FC +S + L Y + +Q PN WN RG +
Sbjct: 56 MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115
Query: 60 REAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNA 119
A+ LY M+ + G P+++T+P + K CA G +I GHVLKLG D+D+YVH +
Sbjct: 116 VSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 120 VIHVFVSCGDLGLACNVFDESC-------------------------------VRNLVSW 148
+I ++V G L A VFD+S V+++VSW
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 149 NSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISE 208
N++I+G+ +G +EA+ LF+DM V PDE TM+ +VSACAQ + LGR++H +I +
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 209 SGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKI 268
G + + NAL+D+Y KCG+LE+A C +
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETA--------------CG-----------------L 323
Query: 269 FDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGAL 328
F+ LP K V+ WN +IGGY KEAL LF EM +G P+ VT + L AC+ LGA+
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 329 DDGIWIHRFIEK--ENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIG 386
D G WIH +I+K + L T+L+DMYAKCG+I A QVF+ + ++ ++ A+I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 387 GLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLS 446
G A+HG+A + FS M +G+ PD+ITF+G+LSAC H G++D GR F M+ ++++
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 447 PKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMK 506
PKL+HY CM+DLLG SGL +EAE++I M M D V+W +L AC++HGNV +GE A
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 563
Query: 507 LLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIV 566
L++++P++ G YVLL+N+Y + W E K R ++ ++G++K PGCSSIE++ +++EFI+
Sbjct: 564 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 567 RDKSHPELEQIYDCLVQL 584
DK HP +IY L ++
Sbjct: 624 GDKFHPRNREIYGMLEEM 641
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/554 (41%), Positives = 348/554 (62%), Gaps = 8/554 (1%)
Query: 38 VQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFL 97
+Q P+ +N ++ + + + L+ + LR G PDNFT P++ K L
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGE-LRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 98 GYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVR 157
G ++ G+ +K G + D YV N+++ ++ S G + + VFDE R++VSWN LI+ +V
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 158 SGFPREAIRLFRDMQLE-RVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVP 216
+G +AI +F+ M E ++ DE T++ +SAC+ L++L +G I+ ++ + ++V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVR 183
Query: 217 LANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKY 276
+ NAL+DM+ KCG L+ A +FDSM +K V T+M+ GY G +D AR +F+ P K
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 277 VVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHR 336
VV W A++ GYVQ R EAL LF MQ GI+PD V L+ C+Q GAL+ G WIH
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 337 FIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALD 396
+I + ++ V+GTALVDMYAKCG I AL+VF+E+ ER++ ++T++I GLA++G +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 397 AISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMV 456
A+ + EM VG+ D ITF+ +L+AC HGG V EGRK F M+ + PK +H SC++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 457 DLLGRSGLLEEAEQLIRSMPMAAD---VVVWGALFFACRLHGNVSIGERAAMKLLELDPQ 513
DLL R+GLL+EAE+LI M +D V V+ +L A R +GNV I ER A KL +++
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 514 DSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDK--SH 571
DS + LLA++Y +N WE+ VR+ M++ G+ K PGCSSIE++G+ +EFIV D SH
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Query: 572 PELEQIYDCLVQLT 585
P++++I L Q T
Sbjct: 544 PKMDEINSMLHQTT 557
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 171/373 (45%), Gaps = 64/373 (17%)
Query: 33 KILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASL 92
K+ + + SWN I ++ G+ +A+ ++K+M + + D T C++L
Sbjct: 102 KVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSAL 161
Query: 93 GLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFD-------------- 138
+G I+ V+ F++ + + NA++ +F CG L A VFD
Sbjct: 162 KNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
Query: 139 -----------------ESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEV 181
S V+++V W +++NG+V+ EA+ LFR MQ + PD
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 182 TMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
++ +++ CAQ L G+ IH YI+E+ +T+ + AL+DMY KCG +E+A E+F +
Sbjct: 281 VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 242 VNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFH 301
+ S T++I G A G S AL L++
Sbjct: 341 KERDTASWTSLIYGLAMNGM-------------------------------SGRALDLYY 369
Query: 302 EMQATGIKPDAVTTVHCLSACSQLGALDDGIWI-HRFIEKENFNLNVVLGTALVDMYAKC 360
EM+ G++ DA+T V L+AC+ G + +G I H E+ N + L+D+ +
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 361 GNIAKALQVFHEM 373
G + +A ++ +M
Sbjct: 430 GLLDEAEELIDKM 442
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 338/561 (60%), Gaps = 8/561 (1%)
Query: 28 LDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFK 87
LD + ++ + +WN + GF + + EA+ Y M+ G + +++ +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL-CYFAMMHKEGFVLNEYSFASVLS 160
Query: 88 VCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS 147
C+ L G ++ + K F D+Y+ +A++ ++ CG++ A VFDE RN+VS
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 148 WNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYIS 207
WNSLI F ++G EA+ +F+ M RVEPDEVT+ ++SACA L + +G+E+H +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 208 ESG-LTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIAR 266
++ L + L+NA +DMY KC +++ A IFDSM + V++ T+MI GYA AR
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 267 KIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLG 326
+F + E+ VV WNA+I GY Q ++EAL+LF ++ + P + + L AC+ L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 327 ALDDGIWIHRFIEKENFNL------NVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLT 380
L G+ H + K F ++ +G +L+DMY KCG + + VF +M ER+ ++
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 381 YTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMS 440
+ A+I G A +G +A+ F EM+ G PD IT +G+LSAC H G V+EGR YF+ M+
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 441 SIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIG 500
F ++P HY+CMVDLLGR+G LEEA+ +I MPM D V+WG+L AC++H N+++G
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLG 580
Query: 501 ERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGL 560
+ A KLLE++P +SG YVLL+NMY + WE+ VRK M + GV K PGCS I++ G
Sbjct: 581 KYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGH 640
Query: 561 LYEFIVRDKSHPELEQIYDCL 581
+ F+V+DKSHP +QI+ L
Sbjct: 641 DHVFMVKDKSHPRKKQIHSLL 661
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 153/278 (55%)
Query: 200 REIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKF 259
R +H + +SG + + + N L+D Y KCG LE ++FD M + + + +++ G K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 260 GFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCL 319
GFLD A +F +PE+ WN+++ G+ Q R +EAL F M G + + L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 320 SACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSL 379
SACS L ++ G+ +H I K F +V +G+ALVDMY+KCGN+ A +VF EM +RN +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 380 TYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQM 439
++ ++I +G A++A+ F M+ + PDE+T ++SAC + G++ ++
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 440 SSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPM 477
+L + + VD+ + ++EA + SMP+
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 213/499 (42%), Gaps = 115/499 (23%)
Query: 78 DNFTYPLLFKVC--ASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACN 135
D+ + L C + L ++ Y + V+K GF ++++ N +I + CG L
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRY-VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 136 VFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDM----------------QLERVEP- 178
VFD+ RN+ +WNS++ G + GF EA LFR M Q +R E
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 179 --------------DEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDM 224
+E + ++SAC+ L D+N G ++H I++S V + +AL+DM
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 225 YVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAII 284
Y KCG + A+ +FD M ++ VVS WN++I
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVS-------------------------------WNSLI 225
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIH-RFIEKENF 343
+ Q + EAL +F M + ++PD VT +SAC+ L A+ G +H R ++ +
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 344 NLNVVLGTALVDMYAKCGNIAKALQVFHEMP----------------------------- 374
+++L A VDMYAKC I +A +F MP
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 375 --ERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEG 432
ERN +++ A+I G +G+ +A+S F + + P +F IL AC D
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC-----ADLA 400
Query: 433 RKYFAQMSSIFRLSPKLKHYS----------CMVDLLGRSGLLEEAEQLIRSMPMAADVV 482
+ + + L K S ++D+ + G +EE + R M M D V
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCV 459
Query: 483 VWGALF--FACRLHGNVSI 499
W A+ FA +GN ++
Sbjct: 460 SWNAMIIGFAQNGYGNEAL 478
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 186/411 (45%), Gaps = 76/411 (18%)
Query: 23 SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY 82
S+ N++ ++ + + N SWN I F + G EA+D+++ ML + PD T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTL 256
Query: 83 PLLFKVCASLGLRFLGYEIFGHVLKLG-FDVDMYVHNAVIHVFVSCGDLGLACNVFDESC 141
+ CASL +G E+ G V+K D+ + NA + ++ C + A +FD
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 142 V-------------------------------RNLVSWNSLINGFVRSGFPREAIRLFRD 170
+ RN+VSWN+LI G+ ++G EA+ LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 171 MQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLT------VPLANALMDM 224
++ E V P + ++ ACA L +L+LG + H ++ + G + + N+L+DM
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 225 YVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAII 284
YVKCG +E +F M+ + VS MI+G+A+ G+
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGY----------------------- 473
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIE-KENF 343
EAL LF EM +G KPD +T + LSAC G +++G H F +F
Sbjct: 474 --------GNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG--RHYFSSMTRDF 523
Query: 344 NLNVVLG--TALVDMYAKCGNIAKALQVFHEMP-ERNSLTYTAIIGGLALH 391
+ + T +VD+ + G + +A + EMP + +S+ + +++ +H
Sbjct: 524 GVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 325/538 (60%), Gaps = 1/538 (0%)
Query: 41 PNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYE 100
P S +N +R + + R + L+ Q +R+ G R D F++ + K + + F G E
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 101 IFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGF 160
+ G K+ D +V + ++ SCG + A NVFDE R++V+WN++I + R G
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 161 PREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANA 220
EA +LF +M+ V PDE+ + +VSAC + ++ R I+ ++ E+ + + L A
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 221 LMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPW 280
L+ MY G ++ A E F M + + T M+ GY+K G LD A+ IFD +K +V W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 281 NAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEK 340
+I YV++ +EAL +F EM +GIKPD V+ +SAC+ LG LD W+H I
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 341 ENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISY 400
+ + AL++MYAKCG + VF +MP RN ++++++I L++HG+A DA+S
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 401 FSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLG 460
F+ M + P+E+TF+G+L C H GLV+EG+K FA M+ + ++PKL+HY CMVDL G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 461 RSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVL 520
R+ LL EA ++I SMP+A++VV+WG+L ACR+HG + +G+ AA ++LEL+P G VL
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 521 LANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIY 578
++N+Y WE+ +R++MEE+ V K G S I+ NG +EF++ DK H + +IY
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 610
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/578 (38%), Positives = 343/578 (59%), Gaps = 3/578 (0%)
Query: 11 FAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQML 70
F + L+ F A E LD K+ + N SW I G+ ++AVDL+ +M+
Sbjct: 170 FVQNSLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 71 RNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDL 130
R+ P++ T + CA L G +++ + G +V+ + +A++ +++ C +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 131 GLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSAC 190
+A +FDE NL N++ + +VR G REA+ +F M V PD ++M+ +S+C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 191 AQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCT 250
+QL ++ G+ H Y+ +G + NAL+DMY+KC + ++A IFD M NKTVV+
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWN 407
Query: 251 TMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQAT-GIK 309
+++ GY + G +D A + F+ +PEK +V WN II G VQ +EA+ +F MQ+ G+
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 310 PDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQV 369
D VT + SAC LGALD WI+ +IEK L+V LGT LVDM+++CG+ A+ +
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 370 FHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLV 429
F+ + R+ +TA IG +A+ G A AI F +MI GL PD + F+G L+AC HGGLV
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 430 DEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFF 489
+G++ F M + +SP+ HY CMVDLLGR+GLLEEA QLI MPM + V+W +L
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 490 ACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKT 549
ACR+ GNV + AA K+ L P+ +G YVLL+N+Y + W + KVR M+E+G+ K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 550 PGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTRH 587
PG SSI++ G +EF D+SHPE+ I L ++++
Sbjct: 708 PGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 256/521 (49%), Gaps = 73/521 (14%)
Query: 1 MTITGLISHGFAPSRLIA-FCAISESKNLDYCTKILFNVQNPNS-FSWNVAIRGFLETGK 58
+T GL + ++L+A C + ++L + ++ N ++ + F +N IRG+ +G
Sbjct: 55 LTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGL 114
Query: 59 MREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHN 118
EA+ L+ +M+ N G PD +T+P CA + G +I G ++K+G+ D++V N
Sbjct: 115 CNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQN 173
Query: 119 AVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRL-FRDMQLERVE 177
+++H + CG+L A VFDE RN+VSW S+I G+ R F ++A+ L FR ++ E V
Sbjct: 174 SLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVT 233
Query: 178 PDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEI 237
P+ VTM+ ++SACA+LEDL G +++ +I SG+ + + +AL+DMY+KC ++ A+ +
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Query: 238 FDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEAL 297
FD + C M Y + G ++EAL
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGL-------------------------------TREAL 322
Query: 298 ALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMY 357
+F+ M +G++PD ++ + +S+CSQL + G H ++ + F + AL+DMY
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 358 AKC-------------------------------GNIAKALQVFHEMPERNSLTYTAIIG 386
KC G + A + F MPE+N +++ II
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 387 GLALHGKALDAISYFSEMIGV-GLMPDEITFLGILSACCHGGLVDEGR--KYFAQMSSIF 443
GL +AI F M G+ D +T + I SAC H G +D + Y+ + + I
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI- 501
Query: 444 RLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVW 484
+L +L + +VD+ R G E A + S+ DV W
Sbjct: 502 QLDVRLG--TTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 539
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 323/568 (56%), Gaps = 44/568 (7%)
Query: 21 AISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNF 80
A+S + + ++ VQ PN N IR + + +A ++ +M R G DNF
Sbjct: 60 ALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQR-FGLFADNF 118
Query: 81 TYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGL--ACNVFD 138
TYP L K C+ + + H+ KLG D+YV NA+I + CG LG+ A +F+
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 139 ESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNL 198
+ R+ VSWNS++ G V++G R+A RLF DE+ ++S
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLF----------DEMPQRDLIS---------- 218
Query: 199 GREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAK 258
W N ++D Y +C ++ A E+F+ M + VS +TM++GY+K
Sbjct: 219 -----W--------------NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSK 259
Query: 259 FGFLDIARKIFDD--LPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTV 316
G +++AR +FD LP K VV W II GY + KEA L +M A+G+K DA +
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 317 HCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPER 376
L+AC++ G L G+ IH +++ N N + AL+DMYAKCGN+ KA VF+++P++
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 377 NSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYF 436
+ +++ ++ GL +HG +AI FS M G+ PD++TF+ +L +C H GL+DEG YF
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 437 AQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGN 496
M ++ L P+++HY C+VDLLGR G L+EA +++++MPM +VV+WGAL ACR+H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 497 VSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIE 556
V I + L++LDP D G Y LL+N+Y + WE +R M+ GVEK G SS+E
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
Query: 557 VNGLLYEFIVRDKSHPELEQIYDCLVQL 584
+ ++EF V DKSHP+ +QIY L L
Sbjct: 560 LEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 53/298 (17%)
Query: 195 DLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIV 254
+LN +++H I L + +A L+ C + A +F+ + V C
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC----- 85
Query: 255 GYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVT 314
N++I + Q + +A +F EMQ G+ D T
Sbjct: 86 --------------------------NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFT 119
Query: 315 TVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIA--KALQVFHE 372
L ACS L +H IEK + ++ + AL+D Y++CG + A+++F +
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 373 MPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEG 432
M ER+++++ +++GGL G+ DA F EM D I++ +L +G
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTML----------DG 225
Query: 433 RKYFAQMSSIFRLSPKLKH-----YSCMVDLLGRSGLLEEAEQLIRSMPMAA-DVVVW 484
+MS F L K+ +S MV ++G +E A + MP+ A +VV W
Sbjct: 226 YARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTW 283
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/622 (35%), Positives = 341/622 (54%), Gaps = 42/622 (6%)
Query: 4 TGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAV 63
+G + G+ ++LIA + S + +L ++ +P +S++ I + +++
Sbjct: 44 SGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSI 101
Query: 64 DLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHV 123
++ +M +G PD+ P LFKVCA L +G +I G D+D +V ++ H+
Sbjct: 102 GVFSRMFSHG-LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 124 FVSCGDLGLACNVFD-----------------------ESCVR------------NLVSW 148
++ CG +G A VFD E VR N+VSW
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 149 NSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISE 208
N +++GF RSG+ +EA+ +F+ + PD+VT+ ++ + E LN+GR IH Y+ +
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 209 SGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKI 268
GL + +A++DMY K G + +F+ C I G ++ G +D A ++
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 269 FDDLPEKY----VVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQ 324
F+ E+ VV W +II G Q + EAL LF EMQ G+KP+ VT L AC
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 325 LGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAI 384
+ AL G H F + + NV +G+AL+DMYAKCG I + VF+ MP +N + + ++
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSL 460
Query: 385 IGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFR 444
+ G ++HGKA + +S F ++ L PD I+F +LSAC GL DEG KYF MS +
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG 520
Query: 445 LSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAA 504
+ P+L+HYSCMV+LLGR+G L+EA LI+ MP D VWGAL +CRL NV + E AA
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAA 580
Query: 505 MKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEF 564
KL L+P++ G YVLL+N+Y MW E +R ME G++K PGCS I+V +Y
Sbjct: 581 EKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTL 640
Query: 565 IVRDKSHPELEQIYDCLVQLTR 586
+ DKSHP+++QI + + ++++
Sbjct: 641 LAGDKSHPQIDQITEKMDEISK 662
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 198/430 (46%), Gaps = 41/430 (9%)
Query: 105 VLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREA 164
+LK G D Y+ +I + + A V + S++SLI ++ ++
Sbjct: 41 ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS 100
Query: 165 IRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDM 224
I +F M + PD + + CA+L +G++IH SGL + + ++ M
Sbjct: 101 IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 225 YVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLP----EKYVVPW 280
Y++CG++ A ++FD M +K VV+C+ ++ YA+ G L+ +I ++ E +V W
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 281 NAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEK 340
N I+ G+ ++ KEA+ +F ++ G PD VT L + L+ G IH ++ K
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 341 ENFNLNVVLGTALVDMYAKCGN-------------------------------IAKALQV 369
+ + + +A++DMY K G+ + KAL++
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 370 FHEMPER----NSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCH 425
F E+ N +++T+II G A +GK ++A+ F EM G+ P+ +T +L AC +
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 426 GGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWG 485
+ GR + L + S ++D+ + G + ++ + MP ++V W
Sbjct: 401 IAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMP-TKNLVCWN 458
Query: 486 ALFFACRLHG 495
+L +HG
Sbjct: 459 SLMNGFSMHG 468
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/531 (38%), Positives = 322/531 (60%), Gaps = 39/531 (7%)
Query: 30 YCTKILFNVQNP-NSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKV 88
Y + IL ++++ +SFS+N + + K R + YK + NG + PD FT+P +FK
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKA 115
Query: 89 CASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSW 148
C G +I G V K+GF D+YV N+++H + CG+ AC VF E VR++VSW
Sbjct: 116 CGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSW 175
Query: 149 NSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISE 208
+I GF R+G +EA+ F M VEP+ T + ++ + ++ L+LG+ IH I +
Sbjct: 176 TGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILK 232
Query: 209 SGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKI 268
+++ NAL+DMYVKC E++ D+M ++
Sbjct: 233 RASLISLETGNALIDMYVKC------EQLSDAM-------------------------RV 261
Query: 269 FDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQ-ATGIKPDAVTTVHCLSACSQLGA 327
F +L +K V WN++I G V +RSKEA+ LF MQ ++GIKPD LSAC+ LGA
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 328 LDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGG 387
+D G W+H +I + +GTA+VDMYAKCG I AL++F+ + +N T+ A++GG
Sbjct: 322 VDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG 381
Query: 388 LALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSI-FRLS 446
LA+HG L+++ YF EM+ +G P+ +TFL L+ACCH GLVDEGR+YF +M S + L
Sbjct: 382 LAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLF 441
Query: 447 PKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNV-SIGERAAM 505
PKL+HY CM+DLL R+GLL+EA +L+++MP+ DV + GA+ AC+ G + + +
Sbjct: 442 PKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILD 501
Query: 506 KLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIE 556
L+++ +DSG+YVLL+N++ + W++ ++R++M+ +G+ K PG S IE
Sbjct: 502 SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 26 KNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLL 85
+ L ++ ++ + SWN I G + + +EA+DL+ M + G +PD +
Sbjct: 253 EQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSV 312
Query: 86 FKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNL 145
CASLG G + ++L G D ++ A++ ++ CG + A +F+ +N+
Sbjct: 313 LSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 372
Query: 146 VSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWY 205
+WN+L+ G G E++R F +M +P+ VT + ++AC ++ GR
Sbjct: 373 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 432
Query: 206 ISESGLTLTVPLAN--ALMDMYVKCGKLESAEEIFDSM-VNKTVVSCTTMIVGYAKFG-F 261
+ L L + ++D+ + G L+ A E+ +M V V C ++ G
Sbjct: 433 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 492
Query: 262 LDIARKIFDDL 272
+++ ++I D
Sbjct: 493 MELPKEILDSF 503
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/579 (34%), Positives = 338/579 (58%), Gaps = 37/579 (6%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMR 60
+ + GL GF ++LI A S ++ + ++ ++ P F WN IRG+ +
Sbjct: 44 LLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQ 101
Query: 61 EAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAV 120
+A+ +Y M + PD+FT+P L K C+ L +G + V +LGFD D++V N +
Sbjct: 102 DALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 121 IHVFVSCGDLGLACNVFDESCV--RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEP 178
I ++ C LG A VF+ + R +VSW ++++ + ++G P EA+ +F M+ V+P
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 179 DEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIF 238
D V ++ +++A L+DL GR IH + + GL + L +L MY KCG++ +A
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA---- 276
Query: 239 DSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALA 298
+ +FD + ++ WNA+I GY + ++EA+
Sbjct: 277 ---------------------------KILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 299 LFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYA 358
+FHEM ++PD ++ +SAC+Q+G+L+ ++ ++ + ++ +V + +AL+DM+A
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 359 KCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLG 418
KCG++ A VF +R+ + ++A+I G LHG+A +AIS + M G+ P+++TFLG
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 419 ILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMA 478
+L AC H G+V EG +F +M+ +++P+ +HY+C++DLLGR+G L++A ++I+ MP+
Sbjct: 430 LLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 479 ADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVR 538
V VWGAL AC+ H +V +GE AA +L +DP ++G YV L+N+Y + +W+ +VR
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 539 KMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQI 577
M+E+G+ K GCS +EV G L F V DKSHP E+I
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 215/462 (46%), Gaps = 44/462 (9%)
Query: 59 MREAVDLYKQML-RNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVH 117
M EA L +L N G D+F L+ L+ +I +L LG ++
Sbjct: 1 MSEASCLASPLLYTNSGIHSDSFYASLIDSATHKAQLK----QIHARLLVLGLQFSGFLI 56
Query: 118 NAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVE 177
+IH S GD+ A VFD+ + WN++I G+ R+ ++A+ ++ +MQL RV
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 178 PDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEI 237
PD T ++ AC+ L L +GR +H + G V + N L+ +Y KC +L SA +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 238 FDS--MVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKE 295
F+ + +T+VS T ++ YA+ G E
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNG-------------------------------EPME 205
Query: 296 ALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVD 355
AL +F +M+ +KPD V V L+A + L L G IH + K + L +L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 356 MYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEIT 415
MYAKCG +A A +F +M N + + A+I G A +G A +AI F EMI + PD I+
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 416 FLGILSACCHGGLVDEGRKYFAQMS-SIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRS 474
+SAC G +++ R + + S +R + S ++D+ + G +E A +L+
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFD 382
Query: 475 MPMAADVVVWGALFFACRLHGNV--SIGERAAMKLLELDPQD 514
+ DVVVW A+ LHG +I AM+ + P D
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/550 (38%), Positives = 312/550 (56%), Gaps = 41/550 (7%)
Query: 39 QNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLG 98
Q +SF N I+ +LET + ++ LY+ + + PDNFT+ L K C+ + G
Sbjct: 38 QRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQG 97
Query: 99 YEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRS 158
++ + + GF DMYV V+ ++ G +G A N FDE R+ VSW +LI+G++R
Sbjct: 98 LQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRC 157
Query: 159 GFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLA 218
G A +LF M ++D V +
Sbjct: 158 GELDLASKLFDQM-------------------PHVKD-------------------VVIY 179
Query: 219 NALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVV 278
NA+MD +VK G + SA +FD M +KTV++ TTMI GY +D ARK+FD +PE+ +V
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 279 PWNAIIGGYVQAKRSKEALALFHEMQAT-GIKPDAVTTVHCLSACSQLGALDDGIWIHRF 337
WN +IGGY Q K+ +E + LF EMQAT + PD VT + L A S GAL G W H F
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 338 IEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDA 397
++++ + V + TA++DMY+KCG I KA ++F EMPE+ ++ A+I G AL+G A A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 398 ISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVD 457
+ F M+ + PDEIT L +++AC HGGLV+EGRK+F M + L+ K++HY CMVD
Sbjct: 360 LDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 458 LLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGI 517
LLGR+G L+EAE LI +MP + ++ + AC + ++ ER K +EL+PQ+ G
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 518 YVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQI 577
YVLL N+Y W++ G V+ +M + +K GCS IE+N ++ EFI D +HP I
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI 537
Query: 578 YDCLVQLTRH 587
+ L L H
Sbjct: 538 HLVLGDLLMH 547
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 4/224 (1%)
Query: 18 AFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRP 77
+C I K++D K+ + N SWN I G+ + + +E + L+++M P
Sbjct: 216 GYCNI---KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDP 272
Query: 78 DNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVF 137
D+ T + + G LG V + D + V A++ ++ CG++ A +F
Sbjct: 273 DDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF 332
Query: 138 DESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLN 197
DE + + SWN++I+G+ +G R A+ LF M +E +PDE+TM+ +++AC +
Sbjct: 333 DEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVE 391
Query: 198 LGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
GR+ + E GL + ++D+ + G L+ AE++ +M
Sbjct: 392 EGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 36/180 (20%)
Query: 23 SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY 82
S+ ++ +I + SWN I G+ G R A+DL+ M+ +PD T
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE--EKPDEITM 377
Query: 83 PLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCV 142
+ C GL G + F HV++ ++GL + C+
Sbjct: 378 LAVITACNHGGLVEEGRKWF-HVMR---------------------EMGLNAKIEHYGCM 415
Query: 143 RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREI 202
+L+ R+G +EA L +M EP+ + + +SAC Q +D+ I
Sbjct: 416 VDLLG---------RAGSLKEAEDLITNMPF---EPNGIILSSFLSACGQYKDIERAERI 463
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 324/573 (56%), Gaps = 40/573 (6%)
Query: 14 SRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLE--TGKMREAVDLYKQMLR 71
SRL+ C + ++ Y ++L +Q + W+ I F T R + Y+ M R
Sbjct: 39 SRLLRRCCTAATQ-FRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRR 97
Query: 72 NGGTRPDNFTYPLLFKVCASLGLRFLG-YEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDL 130
NG P T+P L K A LR ++ H++K G D D +V N++I + S G
Sbjct: 98 NG-VIPSRHTFPPLLK--AVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLF 154
Query: 131 GLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSAC 190
A +FD + +++V+W ++I+GFVR+G EA+ F +M+ V +E+T++ ++ A
Sbjct: 155 DFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 191 AQLEDLNLGREIHWYISESG-LTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSC 249
++ED+ GR +H E+G + V + ++L+DMY KC SC
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC-------------------SC 255
Query: 250 TTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIK 309
D A+K+FD++P + VV W A+I GYVQ++ + + +F EM + +
Sbjct: 256 ------------YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 310 PDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQV 369
P+ T LSAC+ +GAL G +H ++ K + +N GT L+D+Y KCG + +A+ V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 370 FHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLV 429
F + E+N T+TA+I G A HG A DA F M+ + P+E+TF+ +LSAC HGGLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 430 DEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFF 489
+EGR+ F M F + PK HY+CMVDL GR GLLEEA+ LI MPM VVWGALF
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 490 ACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKT 549
+C LH + +G+ AA ++++L P SG Y LLAN+Y +S W+E +VRK M+++ V K+
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 550 PGCSSIEVNGLLYEFIVRDKSHP-ELEQIYDCL 581
PG S IEV G L EFI D P E + +Y L
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/474 (41%), Positives = 295/474 (62%), Gaps = 17/474 (3%)
Query: 129 DLGLACNVFDESCVRNLVSWNSLINGFVRSGFPRE--AIRLFRDMQL-ERVEPDEVTMIG 185
DL A +F++ RN SWN++I GF S + AI LF +M E VEP+ T
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 186 MVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIF-DSMVNK 244
++ ACA+ + G++IH + G + + L+ MYV CG ++ A +F +++ K
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 245 TVVSCT-------------TMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAK 291
+V T MI GY + G AR +FD + ++ VV WN +I GY
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 292 RSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGT 351
K+A+ +F EM+ I+P+ VT V L A S+LG+L+ G W+H + E ++ VLG+
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 352 ALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMP 411
AL+DMY+KCG I KA+ VF +P N +T++A+I G A+HG+A DAI F +M G+ P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 412 DEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQL 471
++ ++ +L+AC HGGLV+EGR+YF+QM S+ L P+++HY CMVDLLGRSGLL+EAE+
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 472 IRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMW 531
I +MP+ D V+W AL ACR+ GNV +G+R A L+++ P DSG YV L+NMY W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 532 EEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLT 585
E ++R M+E+ + K PGCS I+++G+L+EF+V D SHP+ ++I LV+++
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 547
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 209/440 (47%), Gaps = 82/440 (18%)
Query: 4 TGLISHGFAPSRLIAFCAISE--SKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMRE 61
+G + A + ++ FCA S+ ++LDY KI + N FSWN IRGF E+ + +
Sbjct: 49 SGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKA 108
Query: 62 --AVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNA 119
A+ L+ +M+ + P+ FT+P + K CA G G +I G LK GF D +V +
Sbjct: 109 LIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSN 168
Query: 120 VIHVFVSC---------------------------------------------GDLGLAC 134
++ ++V C GD A
Sbjct: 169 LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAAR 228
Query: 135 NVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLE 194
+FD+ R++VSWN++I+G+ +GF ++A+ +FR+M+ + P+ VT++ ++ A ++L
Sbjct: 229 MLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG 288
Query: 195 DLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIV 254
L LG +H Y +SG+ + L +AL+DMY KCG +E A +F+ + + V++
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVIT------ 342
Query: 255 GYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVT 314
W+A+I G+ ++ +A+ F +M+ G++P V
Sbjct: 343 -------------------------WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 315 TVHCLSACSQLGALDDG-IWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEM 373
++ L+ACS G +++G + + + + + +VD+ + G + +A + M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 374 P-ERNSLTYTAIIGGLALHG 392
P + + + + A++G + G
Sbjct: 438 PIKPDDVIWKALLGACRMQG 457
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 314/542 (57%), Gaps = 37/542 (6%)
Query: 27 NLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREA-VDLYKQMLRNGGTRPDNFTYPLL 85
+ +Y + + + PN +S+N IRG T EA + LY++M + G +PD FTY +
Sbjct: 80 DFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRM-KFSGLKPDKFTYNFV 138
Query: 86 FKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNL 145
F CA L +G + + K+G + D+++++++I ++ CG +G A +FDE R+
Sbjct: 139 FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDT 198
Query: 146 VSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWY 205
VSWNS+I+G+ +G+ ++A+ LFR M+ E EPDE T++ M+ AC+ L DL GR +
Sbjct: 199 VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 206 ISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIA 265
+ L+ L + L+ MY KCG L+S A
Sbjct: 259 AITKKIGLSTFLGSKLISMYGKCGDLDS-------------------------------A 287
Query: 266 RKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQL 325
R++F+ + +K V W A+I Y Q +S EA LF EM+ TG+ PDA T LSAC +
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
Query: 326 GALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAII 385
GAL+ G I + + N+ + T LVDMY KCG + +AL+VF MP +N T+ A+I
Sbjct: 348 GALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMI 407
Query: 386 GGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRL 445
A G A +A+ F M + P +ITF+G+LSAC H GLV +G +YF +MSS+F L
Sbjct: 408 TAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGL 464
Query: 446 SPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAM 505
PK++HY+ ++DLL R+G+L+EA + + P D ++ A+ AC +V+I E+A
Sbjct: 465 VPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMR 524
Query: 506 KLLEL-DPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEF 564
L+E+ + +++G YV+ +N+ D MW+E+ K+R +M +RGV KTPGCS IE+ G L EF
Sbjct: 525 MLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEF 584
Query: 565 IV 566
+
Sbjct: 585 LA 586
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 1 MTITGLIS-HGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKM 59
M IT I F S+LI+ + +LD ++ + + +W I + + GK
Sbjct: 258 MAITKKIGLSTFLGSKLISM--YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 60 REAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNA 119
EA L+ +M + G PD T + C S+G LG +I H +L ++YV
Sbjct: 316 SEAFKLFFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG 374
Query: 120 VIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPD 179
++ ++ CG + A VF+ V+N +WN++I + G +EA+ LF M V P
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPS 431
Query: 180 EVTMIGMVSACAQLEDLNLG-REIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIF 238
++T IG++SAC ++ G R H S GL + ++D+ + G L+ A E
Sbjct: 432 DITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
Query: 239 DSMVNK 244
+ K
Sbjct: 492 ERFPGK 497
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 309/544 (56%), Gaps = 34/544 (6%)
Query: 43 SFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIF 102
S WNV +R E++ LY+ MLR+G + PD F++P + K CASL L G ++
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 103 GHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS--WNSLINGFVRSGF 160
HV K G + + +V A+I ++ CG + A VF+E+ + +S +N+LI+G+ +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 161 PREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANA 220
+A +FR M+ V D VTM+G+V C E L LGR +H + GL V + N+
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 221 LMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPW 280
+ MY+KCG +E+ R++FD++P K ++ W
Sbjct: 197 FITMYMKCGSVEAG-------------------------------RRLFDEMPVKGLITW 225
Query: 281 NAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEK 340
NA+I GY Q + + L L+ +M+++G+ PD T V LS+C+ LGA G + + +E
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES 285
Query: 341 ENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISY 400
F NV + A + MYA+CGN+AKA VF MP ++ +++TA+IG +HG +
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLML 345
Query: 401 FSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLG 460
F +MI G+ PD F+ +LSAC H GL D+G + F M ++L P +HYSC+VDLLG
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLG 405
Query: 461 RSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVL 520
R+G L+EA + I SMP+ D VWGAL AC++H NV + E A K++E +P + G YVL
Sbjct: 406 RAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVL 465
Query: 521 LANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDC 580
++N+Y DS E ++R MM ER K PG S +E G ++ F+ D+SH + E+++
Sbjct: 466 MSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRM 525
Query: 581 LVQL 584
L +L
Sbjct: 526 LDEL 529
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/481 (39%), Positives = 283/481 (58%), Gaps = 3/481 (0%)
Query: 100 EIFGHVLKLGFDVDMYVHNAVIHVFVSCGD---LGLACNVFDESCVRNLVSWNSLINGFV 156
+I +LK G D Y + +S L A VFD + WN +I GF
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 157 RSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVP 216
S P ++ L++ M + T ++ AC+ L +IH I++ G V
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 217 LANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKY 276
N+L++ Y G + A +FD + VS ++I GY K G +DIA +F + EK
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 277 VVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHR 336
+ W +I GYVQA +KEAL LFHEMQ + ++PD V+ + LSAC+QLGAL+ G WIH
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 337 FIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALD 396
++ K ++ VLG L+DMYAKCG + +AL+VF + +++ +TA+I G A HG +
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGRE 331
Query: 397 AISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMV 456
AIS F EM +G+ P+ ITF +L+AC + GLV+EG+ F M + L P ++HY C+V
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIV 391
Query: 457 DLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSG 516
DLLGR+GLL+EA++ I+ MP+ + V+WGAL ACR+H N+ +GE L+ +DP G
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGG 451
Query: 517 IYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQ 576
YV AN++ W++A + R++M+E+GV K PGCS+I + G +EF+ D+SHPE+E+
Sbjct: 452 RYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEK 511
Query: 577 I 577
I
Sbjct: 512 I 512
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 214/426 (50%), Gaps = 68/426 (15%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFN-VQNPNSFSWNVAIRGFLETGKM 59
M TGL+ +A ++ ++FC S S + +I+F+ P++F WN+ IRGF + +
Sbjct: 37 MLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEP 96
Query: 60 REAVDLYKQMLRNGGTRPDN-FTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHN 118
++ LY++ML + P N +T+P L K C++L +I + KLG++ D+Y N
Sbjct: 97 ERSLLLYQRML--CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVN 154
Query: 119 AVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSG------------------- 159
++I+ + G+ LA +FD + VSWNS+I G+V++G
Sbjct: 155 SLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS 214
Query: 160 ------------FPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYIS 207
+EA++LF +MQ VEPD V++ +SACAQL L G+ IH Y++
Sbjct: 215 WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN 274
Query: 208 ESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARK 267
++ + + L L+DMY KCG++E A E+F ++ K+V + T +I GYA G
Sbjct: 275 KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG------- 327
Query: 268 IFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGA 327
+EA++ F EMQ GIKP+ +T L+ACS G
Sbjct: 328 ------------------------HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 328 LDDGIWIHRFIEKE-NFNLNVVLGTALVDMYAKCGNIAKALQVFHEMP-ERNSLTYTAII 385
+++G I +E++ N + +VD+ + G + +A + EMP + N++ + A++
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 386 GGLALH 391
+H
Sbjct: 424 KACRIH 429
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/486 (38%), Positives = 300/486 (61%), Gaps = 4/486 (0%)
Query: 101 IFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGF 160
I +++ D D +V +I V + + A +VF N+ + ++I+GFV SG
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 161 PREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANA 220
+ + L+ M V PD + ++ AC DL + REIH + + G + +
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK 163
Query: 221 LMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPW 280
+M++Y K G+L +A+++FD M ++ V+ T MI Y++ GF+ A ++F D+ K V W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 281 NAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEK 340
A+I G V+ K +AL LF EMQ + + T V LSACS LGAL+ G W+H F+E
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 341 ENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISY 400
+ L+ +G AL++MY++CG+I +A +VF M +++ ++Y +I GLA+HG +++AI+
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 401 FSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLG 460
F +M+ G P+++T + +L+AC HGGL+D G + F M +F + P+++HY C+VDLLG
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 461 RSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVL 520
R G LEEA + I ++P+ D ++ G L AC++HGN+ +GE+ A +L E + DSG YVL
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 463
Query: 521 LANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDC 580
L+N+Y S W+E+ ++R+ M + G+EK PGCS+IEV+ ++EF+V D +HP E IY
Sbjct: 464 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQR 523
Query: 581 LVQLTR 586
L +L R
Sbjct: 524 LQELNR 529
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 137/284 (48%), Gaps = 14/284 (4%)
Query: 37 NVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRF 96
+V+ ++ W I G + +M +A++L+++M + + FT + C+ LG
Sbjct: 214 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALE 272
Query: 97 LGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFV 156
LG + V ++ +V NA+I+++ CGD+ A VF ++++S+N++I+G
Sbjct: 273 LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 157 RSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISES-GLTLTV 215
G EAI FRDM P++VT++ +++AC+ L++G E+ + + +
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQI 392
Query: 216 PLANALMDMYVKCGKLESAEEIFDSM-VNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPE 274
++D+ + G+LE A +++ + + T++ G +++ KI L E
Sbjct: 393 EHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE 452
Query: 275 K-------YVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPD 311
YV+ N Y + + KE+ + M+ +GI+ +
Sbjct: 453 SENPDSGTYVLLSNL----YASSGKWKESTEIRESMRDSGIEKE 492
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/565 (35%), Positives = 310/565 (54%), Gaps = 32/565 (5%)
Query: 23 SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY 82
++ + ++ K+ + + SWN + G+ + G R A+++ K M +P T
Sbjct: 181 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN-LKPSFITI 239
Query: 83 PLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCV 142
+ ++L L +G EI G+ ++ GFD + + A++ ++ CG L A +FD
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 143 RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREI 202
RN+VSWNS+I+ +V++ P+EA+ +F+ M E V+P +V+++G + ACA L DL GR I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 203 HWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFL 262
H E GL V + N+L+ MY KC ++
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEV------------------------------- 388
Query: 263 DIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSAC 322
D A +F L + +V WNA+I G+ Q R +AL F +M++ +KPD T V ++A
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 323 SQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYT 382
++L WIH + + + NV + TALVDMYAKCG I A +F M ER+ T+
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508
Query: 383 AIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSI 442
A+I G HG A+ F EM + P+ +TFL ++SAC H GLV+ G K F M
Sbjct: 509 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568
Query: 443 FRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGER 502
+ + + HY MVDLLGR+G L EA I MP+ V V+GA+ AC++H NV+ E+
Sbjct: 569 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 628
Query: 503 AAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLY 562
AA +L EL+P D G +VLLAN+YR ++MWE+ G+VR M +G+ KTPGCS +E+ ++
Sbjct: 629 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688
Query: 563 EFIVRDKSHPELEQIYDCLVQLTRH 587
F +HP+ ++IY L +L H
Sbjct: 689 SFFSGSTAHPDSKKIYAFLEKLICH 713
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 254/507 (50%), Gaps = 42/507 (8%)
Query: 4 TGLISHGFAPSRLIA-FCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREA 62
GL F ++L++ FC ++D ++ + + + ++ ++GF + + +A
Sbjct: 63 NGLYQEHFFQTKLVSLFCRYG---SVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 63 VDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIH 122
+ + +M R P + + L KVC +G EI G ++K GF +D++ + +
Sbjct: 120 LQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 123 VFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVT 182
++ C + A VFD R+LVSWN+++ G+ ++G R A+ + + M E ++P +T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 183 MIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMV 242
++ ++ A + L +++G+EIH Y SG V ++ AL+DMY
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY----------------- 281
Query: 243 NKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHE 302
AK G L+ AR++FD + E+ VV WN++I YVQ + KEA+ +F +
Sbjct: 282 --------------AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 303 MQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGN 362
M G+KP V+ + L AC+ LG L+ G +IH+ + + NV + +L+ MY KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 363 IAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSA 422
+ A +F ++ R +++ A+I G A +G+ +DA++YFS+M + PD T++ +++A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 423 CCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVV 482
+ K+ + L + + +VD+ + G + A +LI M V
Sbjct: 448 IAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 483 VWGALFFACRLHGNVSIGERAAMKLLE 509
W A+ HG G +AA++L E
Sbjct: 506 TWNAMIDGYGTHG---FG-KAALELFE 528
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 176/372 (47%), Gaps = 39/372 (10%)
Query: 66 YKQMLRNGGTRPDN-FTYP--LLFKVCASLG-LRFLGYEIFGHVLKLGFDVDMYVHNAVI 121
++ L P N + +P LL + C+SL LR +I V K G + + ++
Sbjct: 21 HRHFLSERNYIPANVYEHPAALLLERCSSLKELR----QILPLVFKNGLYQEHFFQTKLV 76
Query: 122 HVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEV 181
+F G + A VF+ + V +++++ GF + +A++ F M+ + VEP
Sbjct: 77 SLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVY 136
Query: 182 TMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
++ C +L +G+EIH + +SG +L + L +MY KC ++ A ++FD M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 242 VNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFH 301
+ +VS T++ GY++ G ++ AL +
Sbjct: 197 PERDLVSWNTIVAGYSQNGM-------------------------------ARMALEMVK 225
Query: 302 EMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCG 361
M +KP +T V L A S L + G IH + + F+ V + TALVDMYAKCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 362 NIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILS 421
++ A Q+F M ERN +++ ++I + +A+ F +M+ G+ P +++ +G L
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 422 ACCHGGLVDEGR 433
AC G ++ GR
Sbjct: 346 ACADLGDLERGR 357
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/564 (36%), Positives = 321/564 (56%), Gaps = 36/564 (6%)
Query: 1 MTITGLISHGFAPSRLIAFCAI-SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKM 59
M + +I + SRLI FC E+ NL Y + ++ P+ + WN IRG+ +
Sbjct: 29 MIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNP 88
Query: 60 REAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNA 119
+A+ Y++MLR G + PD FT+P + K C+ L G + G V+K GF+V+MYV
Sbjct: 89 DKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTC 147
Query: 120 VIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPD 179
++H+++ CG++ VF++ N+V+W SLI+GFV + +AI FR+MQ V+ +
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 180 EVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFD 239
E M+ ++ AC + +D+ G+ H ++ G D Y F
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF-----------DPY------------FQ 244
Query: 240 SMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALAL 299
S V V+ T++I YAK G L AR +FD +PE+ +V WN+II GY Q ++EAL +
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCM 304
Query: 300 FHEMQATGIKPDAVTTVHCLSA-----CSQLGALDDGIWIHRFIEKENFNLNVVLGTALV 354
F +M GI PD VT + + A CSQLG IH ++ K F + + ALV
Sbjct: 305 FLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS-----IHAYVSKTGFVKDAAIVCALV 359
Query: 355 DMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVG-LMPDE 413
+MYAK G+ A + F ++ +++++ +T +I GLA HG +A+S F M G PD
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 414 ITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIR 473
IT+LG+L AC H GLV+EG++YFA+M + L P ++HY CMVD+L R+G EEAE+L++
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 474 SMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEE 533
+MP+ +V +WGAL C +H N+ + +R + E + SGIYVLL+N+Y + W +
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWAD 539
Query: 534 AGKVRKMMEERGVEKTPGCSSIEV 557
+R+ M+ + V+K G SS+E
Sbjct: 540 VKLIRESMKSKRVDKVLGHSSVET 563
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/595 (35%), Positives = 329/595 (55%), Gaps = 36/595 (6%)
Query: 19 FCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPD 78
A S+ ++D + + +S SW I G+ G+ +A+ + M++ G P
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-IEPT 145
Query: 79 NFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFD 138
FT + A+ G ++ ++KLG ++ V N++++++ CGD +A VFD
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 139 ESCVRNL-------------------------------VSWNSLINGFVRSGFPREAIRL 167
VR++ V+WNS+I+GF + G+ A+ +
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 168 FRDMQLERV-EPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYV 226
F M + + PD T+ ++SACA LE L +G++IH +I +G ++ + NAL+ MY
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 227 KCGKLESAEEIFDSMVNK--TVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAII 284
+CG +E+A + + K + T ++ GY K G ++ A+ IF L ++ VV W A+I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFN 344
GY Q EA+ LF M G +P++ T LS S L +L G IH K
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 345 LNVVLGTALVDMYAKCGNIAKALQVFHEMP-ERNSLTYTAIIGGLALHGKALDAISYFSE 403
+V + AL+ MYAK GNI A + F + ER+++++T++I LA HG A +A+ F
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 404 MIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSG 463
M+ GL PD IT++G+ SAC H GLV++GR+YF M + ++ P L HY+CMVDL GR+G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 464 LLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLAN 523
LL+EA++ I MP+ DVV WG+L ACR+H N+ +G+ AA +LL L+P++SG Y LAN
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 524 MYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIY 578
+Y WEEA K+RK M++ V+K G S IEV ++ F V D +HPE +IY
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 207/453 (45%), Gaps = 68/453 (15%)
Query: 118 NAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVE 177
N V+ + GD+ C FD+ R+ VSW ++I G+ G +AIR+ DM E +E
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 178 PDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEI 237
P + T+ ++++ A + G+++H +I + GL V ++N+L++MY KCG A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 238 FDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEAL 297
FD MV + + S MI + + G +D+A F+ + E+ +V WN++I G+ Q AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 298 ALFHEM-QATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDM 356
+F +M + + + PD T LSAC+ L L G IH I F+++ ++ AL+ M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 357 YAKCGNIA---------------------------------KALQVFHEMPERNSLTYTA 383
Y++CG + +A +F + +R+ + +TA
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 384 IIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSAC-----------CHGGLVDEG 432
+I G HG +AI+ F M+G G P+ T +LS HG V G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 433 RKYFAQMSS--------------------IFRLSPKLKHYSCMVDLLGRSGLLEEAEQLI 472
Y +S+ + R ++ M+ L + G EEA +L
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 473 RSMPMAA---DVVVWGALFFACRLHGNVSIGER 502
+M M D + + +F AC G V+ G +
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 39/354 (11%)
Query: 202 IHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGF 261
+H + +SGL +V L N LM++Y K G A ++FD M +T S T++ Y+K G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 262 LDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSA 321
+D + FD LP++ V W +I GY + +A+ + +M GI+P T + L++
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 322 CSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGN------------------- 362
+ ++ G +H FI K NV + +L++MYAKCG+
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 363 ---IAKALQV---------FHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLM 410
IA +QV F +M ER+ +T+ ++I G G L A+ FS+M+ L+
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 411 -PDEITFLGILSACCHGGLVDEGRKYFAQM-SSIFRLSPKLKHYSCMVDLLGRSGLLEEA 468
PD T +LSAC + + G++ + + ++ F +S + + ++ + R G +E A
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVETA 333
Query: 469 EQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLA 522
+LI D+ + G F L G + +G+ K + + +D + A
Sbjct: 334 RRLIEQRG-TKDLKIEG---FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 308/559 (55%), Gaps = 32/559 (5%)
Query: 26 KNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLL 85
+ Y + + Q PN F +N I GF+ E +DL+ +R G FT+PL+
Sbjct: 59 RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLS-IRKHGLYLHGFTFPLV 117
Query: 86 FKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNL 145
K C R LG ++ V+K GF+ D+ +++ ++ G L A +FDE R++
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 146 VSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWY 205
V+W +L +G+ SG REAI LF+ M V+PD ++ ++SAC + DL+ G I Y
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 206 ISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIA 265
+ E M+M K TT++ YAK G ++ A
Sbjct: 238 MEE-------------MEM------------------QKNSFVRTTLVNLYAKCGKMEKA 266
Query: 266 RKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQL 325
R +FD + EK +V W+ +I GY KE + LF +M +KPD + V LS+C+ L
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 326 GALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAII 385
GALD G W I++ F N+ + AL+DMYAKCG +A+ +VF EM E++ + A I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 386 GGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRL 445
GLA +G + + F + +G+ PD TFLG+L C H GL+ +G ++F +S ++ L
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 446 SPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAM 505
++HY CMVDL GR+G+L++A +LI MPM + +VWGAL CRL + + E
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 506 KLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFI 565
+L+ L+P ++G YV L+N+Y W+EA +VR MM ++G++K PG S IE+ G ++EF+
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566
Query: 566 VRDKSHPELEQIYDCLVQL 584
DKSHP ++IY L L
Sbjct: 567 ADDKSHPLSDKIYAKLEDL 585
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 182/390 (46%), Gaps = 40/390 (10%)
Query: 23 SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY 82
S S L+ K+ + + + +W G+ +G+ REA+DL+K+M+ G +PD++
Sbjct: 157 SGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM-GVKPDSYFI 215
Query: 83 PLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCV 142
+ C +G G I ++ ++ + +V +++++ CG + A +VFD
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE 275
Query: 143 RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREI 202
+++V+W+++I G+ + FP+E I LF M E ++PD+ +++G +S+CA L L+LG
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 203 HWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFL 262
I + +ANAL+DMY KCG + E+F M K +V I G AK G +
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 263 DIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSAC 322
K + A+F + + GI PD T + L C
Sbjct: 396 -------------------------------KLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 323 SQLGALDDGIWIHRFIEKEN----FNLNVVLGTALVDMYAKCGNIAKALQVFHEMPER-N 377
G + DG+ RF + V +VD++ + G + A ++ +MP R N
Sbjct: 425 VHAGLIQDGL---RFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 378 SLTYTAIIGGLALHGKALDAISYFSEMIGV 407
++ + A++ G L A + E+I +
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLKELIAL 511
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 195/485 (40%), Positives = 289/485 (59%), Gaps = 3/485 (0%)
Query: 100 EIFGHVLKLGFDVDMYVHNAVI-HVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRS 158
+I ++K G D + V+ S D+ A VF +N WN++I GF RS
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 159 GFPREAIRLFRDM--QLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVP 216
FP AI +F DM V+P +T + A +L GR++H + + GL
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 217 LANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKY 276
+ N ++ MYV CG L A IF M+ VV+ +MI+G+AK G +D A+ +FD++P++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 277 VVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHR 336
V WN++I G+V+ R K+AL +F EMQ +KPD T V L+AC+ LGA + G WIH
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 337 FIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALD 396
+I + F LN ++ TAL+DMY KCG I + L VF P++ + ++I GLA +G
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342
Query: 397 AISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMV 456
A+ FSE+ GL PD ++F+G+L+AC H G V ++F M + + P +KHY+ MV
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMV 402
Query: 457 DLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSG 516
++LG +GLLEEAE LI++MP+ D V+W +L ACR GNV + +RAA L +LDP ++
Sbjct: 403 NVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETC 462
Query: 517 IYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQ 576
YVLL+N Y ++EEA + R +M+ER +EK GCSSIEV+ ++EFI +HP+ +
Sbjct: 463 GYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAE 522
Query: 577 IYDCL 581
IY L
Sbjct: 523 IYSLL 527
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 66/418 (15%)
Query: 4 TGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAV 63
TGLIS SR++AFC S S +++Y + + + N F WN IRGF + A+
Sbjct: 51 TGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAI 109
Query: 64 DLYKQML-RNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIH 122
++ ML + +P TYP +FK LG G ++ G V+K G + D ++ N ++H
Sbjct: 110 SIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLH 169
Query: 123 VFVSCGDLGLACNVFDESCVRNLVSWNS-------------------------------L 151
++V+CG L A +F ++V+WNS +
Sbjct: 170 MYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSM 229
Query: 152 INGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGL 211
I+GFVR+G ++A+ +FR+MQ + V+PD TM+ +++ACA L GR IH YI +
Sbjct: 230 ISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF 289
Query: 212 TLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDD 271
L + AL+DMY KCG +E +F+ K + +MI+G A GF
Sbjct: 290 ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF---------- 339
Query: 272 LPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDG 331
+ A+ LF E++ +G++PD+V+ + L+AC+ G +
Sbjct: 340 ---------------------EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 332 IWIHRFI-EKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMP-ERNSLTYTAIIGG 387
R + EK ++ T +V++ G + +A + MP E +++ +++++
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 7/277 (2%)
Query: 28 LDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFK 87
+D + + N SWN I GF+ G+ ++A+D++++M + +PD FT L
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMVSLLN 266
Query: 88 VCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS 147
CA LG G I ++++ F+++ V A+I ++ CG + NVF+ + + L
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 148 WNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYIS 207
WNS+I G +GF A+ LF +++ +EPD V+ IG+++ACA +++ E +
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 208 ESGLT-LTVPLANALMDMYVKCGKLESAEEIFDSM-VNKTVVSCTTMIVGYAKFGFLDIA 265
E + ++ ++++ G LE AE + +M V + V ++++ K G +++A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 266 RKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHE 302
++ L K + P GYV + + LF E
Sbjct: 447 KRAAKCL--KKLDPDETC--GYVLLSNAYASYGLFEE 479
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 362 bits (928), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 297/542 (54%), Gaps = 38/542 (7%)
Query: 45 SWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGH 104
SWN I G+ ++G +EA+ L NG D+ T L C G G I +
Sbjct: 218 SWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 105 VLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREA 164
+K G + +++V N +I ++ G L VFD VR+L+SWNS+I + + P A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 165 IRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLT-VPLANALMD 223
I LF++M+L R++PD +T+I + S +QL D+ R + + G L + + NA+
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV-- 390
Query: 224 MYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAI 283
+V YAK G +D AR +F+ LP V+ WN I
Sbjct: 391 -----------------------------VVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 284 IGGYVQAKRSKEALALFHEMQATG-IKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKEN 342
I GY Q + EA+ +++ M+ G I + T V L ACSQ GAL G+ +H + K
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 343 FNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFS 402
L+V + T+L DMY KCG + AL +F+++P NS+ + +I HG A+ F
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 403 EMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRS 462
EM+ G+ PD ITF+ +LSAC H GLVDEG+ F M + + ++P LKHY CMVD+ GR+
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 463 GLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLA 522
G LE A + I+SM + D +WGAL ACR+HGNV +G+ A+ L E++P+ G +VLL+
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 523 NMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLV 582
NMY + WE ++R + +G+ KTPG SS+EV+ + F +++HP E++Y L
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 583 QL 584
L
Sbjct: 722 AL 723
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 254/512 (49%), Gaps = 49/512 (9%)
Query: 37 NVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRF 96
++QN + ++WN+ I G+ G E + + + + G PD T+P + K C ++
Sbjct: 111 HIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---I 167
Query: 97 LGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFV 156
G +I LK GF D+YV ++IH++ +G A +FDE VR++ SWN++I+G+
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 157 RSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVP 216
+SG +EA+ L ++ D VT++ ++SAC + D N G IH Y + GL +
Sbjct: 228 QSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 217 LANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKY 276
++N L+D+Y + G+L +++FD M + ++S
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS---------------------------- 315
Query: 277 VVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHR 336
WN+II Y ++ A++LF EM+ + I+PD +T + S SQLG + +
Sbjct: 316 ---WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 337 FIEKENFNL-NVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKAL 395
F ++ + L ++ +G A+V MYAK G + A VF+ +P + +++ II G A +G A
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 396 DAISYFSEMIGVG-LMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSC 454
+AI ++ M G + ++ T++ +L AC G + +G K ++ L + +
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTS 491
Query: 455 MVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQ- 513
+ D+ G+ G LE+A L +P + V W L HG+ GE+A M E+ +
Sbjct: 492 LADMYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGH---GEKAVMLFKEMLDEG 547
Query: 514 ---DSGIYVLLANMYRDSNMWEEAGKVRKMME 542
D +V L + S + +E +MM+
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 38/392 (9%)
Query: 5 GLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVD 64
GL S F ++LI A E L C K+ + + SWN I+ + + A+
Sbjct: 277 GLESELFVSNKLIDLYA--EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 65 LYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLG-FDVDMYVHNAVIHV 123
L+++M R +PD T L + + LG + G L+ G F D+ + NAV+ +
Sbjct: 335 LFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 124 FVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLE-RVEPDEVT 182
+ G + A VF+ +++SWN++I+G+ ++GF EAI ++ M+ E + ++ T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 183 MIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMV 242
+ ++ AC+Q L G ++H + ++GL L V + +L DMY KCG+LE
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED--------- 504
Query: 243 NKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHE 302
A +F +P VPWN +I + ++A+ LF E
Sbjct: 505 ----------------------ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 303 MQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKE-NFNLNVVLGTALVDMYAKCG 361
M G+KPD +T V LSACS G +D+G W ++ + ++ +VDMY + G
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 362 NIAKALQVFHEMP-ERNSLTYTAIIGGLALHG 392
+ AL+ M + ++ + A++ +HG
Sbjct: 603 QLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 203/462 (43%), Gaps = 95/462 (20%)
Query: 120 VIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLER-VEP 178
+++++ G++ LA + FD R++ +WN +I+G+ R+G E IR F L + P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 179 DEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIF 238
D T ++ AC + D G +IH + G V +A +L+ +Y
Sbjct: 152 DYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLY------------- 195
Query: 239 DSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALA 298
+++ + AR +FD++P + + WNA+I GY Q+ +KEAL
Sbjct: 196 ------------------SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237
Query: 299 LFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYA 358
L + ++A D+VT V LSAC++ G + G+ IH + K + + L+D+YA
Sbjct: 238 LSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 359 KCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITF-- 416
+ G + +VF M R+ +++ +II L+ + L AIS F EM + PD +T
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 417 -------LGILSAC---------------------------CHGGLVDEGRKYFAQMSSI 442
LG + AC GLVD R F + +
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 443 FRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSM----PMAADVVVWGALFFACRLHGNVS 498
+S ++ ++ ++G EA ++ M +AA+ W ++ AC G +
Sbjct: 414 DVIS-----WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 499 IGERAAMKLLELDPQDSGIYV------LLANMYRDSNMWEEA 534
G + +LL+ +G+Y+ LA+MY E+A
Sbjct: 469 QGMKLHGRLLK-----NGLYLDVFVVTSLADMYGKCGRLEDA 505
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/552 (37%), Positives = 306/552 (55%), Gaps = 15/552 (2%)
Query: 32 TKILF-NVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCA 90
+ILF N +N N S+N I G+ + +A+ L+ +++ + G D + +F+ CA
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM-SSGLGFDEISLSGVFRACA 393
Query: 91 SLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNS 150
+ G +I+G +K +D+ V NA I ++ C L A VFDE R+ VSWN+
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 151 LINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESG 210
+I ++G E + LF M R+EPDE T ++ AC L G EIH I +SG
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG 512
Query: 211 LTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFD 270
+ + +L+DMY KCG +E AE+I + VS G ++ K+ +
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHN 561
Query: 271 DLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDD 330
++ V WN+II GYV ++S++A LF M GI PD T L C+ L +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 331 GIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLAL 390
G IH + K+ +V + + LVDMY+KCG++ + +F + R+ +T+ A+I G A
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 391 HGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLK 450
HGK +AI F MI + P+ +TF+ IL AC H GL+D+G +YF M + L P+L
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP 741
Query: 451 HYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLH-GNVSIGERAAMKLLE 509
HYS MVD+LG+SG ++ A +LIR MP AD V+W L C +H NV + E A LL
Sbjct: 742 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 801
Query: 510 LDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDK 569
LDPQDS Y LL+N+Y D+ MWE+ +R+ M ++K PGCS +E+ L+ F+V DK
Sbjct: 802 LDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDK 861
Query: 570 SHPELEQIYDCL 581
+HP E+IY+ L
Sbjct: 862 AHPRWEEIYEEL 873
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 213/430 (49%), Gaps = 40/430 (9%)
Query: 45 SWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGH 104
SWN + G+L+ G+ ++++++ M R G D T+ ++ KVC+ L LG +I G
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 105 VLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREA 164
V+++G D D+ +A++ ++ + VF +N VSW+++I G V++ A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 165 IRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDM 224
++ F++MQ + ++ +CA L +L LG ++H + +S + A +DM
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 225 YVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAII 284
Y KC ++ A+ +FD+ N S +NA+I
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQS-------------------------------YNAMI 354
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFN 344
GY Q + +AL LFH + ++G+ D ++ AC+ + L +G+ I+ K + +
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 345 LNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEM 404
L+V + A +DMY KC +A+A +VF EM R+++++ AII +GK + + F M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 405 IGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYS---CMVDLLGR 461
+ + PDE TF IL AC G L Y ++ S S + S ++D+ +
Sbjct: 475 LRSRIEPDEFTFGSILKACTGGSL-----GYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 462 SGLLEEAEQL 471
G++EEAE++
Sbjct: 530 CGMIEEAEKI 539
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 190/449 (42%), Gaps = 66/449 (14%)
Query: 79 NFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFD 138
NF++ +FK CA G LG + H++ GF +V N ++ V+ + D A VFD
Sbjct: 50 NFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 107
Query: 139 ESC-------------------------------VRNLVSWNSLINGFVRSGFPREAIRL 167
+ VR++VSWNS+++G++++G ++I +
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 168 FRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVK 227
F DM E +E D T ++ C+ LED +LG +IH + G V A+AL+DMY K
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 228 CGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGY 287
+ + +F + K VS + +I G + L +
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL----------------------- 264
Query: 288 VQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNV 347
AL F EMQ L +C+ L L G +H K +F +
Sbjct: 265 --------ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 348 VLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGV 407
++ TA +DMYAKC N+ A +F N +Y A+I G + A+ F ++
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 408 GLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEE 467
GL DEI+ G+ AC + EG + + ++ LS + + +D+ G+ L E
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYG-LAIKSSLSLDVCVANAAIDMYGKCQALAE 435
Query: 468 AEQLIRSMPMAADVVVWGALFFACRLHGN 496
A ++ M D V W A+ A +G
Sbjct: 436 AFRVFDEMR-RRDAVSWNAIIAAHEQNGK 463
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 316/563 (56%), Gaps = 33/563 (5%)
Query: 23 SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY 82
S+ D +K+ + ++ +WN I G++++G M E++ + +M+ + G PD T+
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPDAITF 343
Query: 83 PLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCV 142
L + +I ++++ +D+++ +A+I + C + +A N+F +
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 143 RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREI 202
++V + ++I+G++ +G +++ +FR + ++ P+E+T++ ++ L L LGRE+
Sbjct: 404 VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL 463
Query: 203 HWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFL 262
H +I + G + A++DMY KCG++
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRM------------------------------- 492
Query: 263 DIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSAC 322
++A +IF+ L ++ +V WN++I Q+ A+ +F +M +GI D V+ LSAC
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 323 SQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYT 382
+ L + G IH F+ K + +V + L+DMYAKCGN+ A+ VF M E+N +++
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 383 AIIGGLALHGKALDAISYFSEMI-GVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSS 441
+II HGK D++ F EM+ G+ PD+ITFL I+S+CCH G VDEG ++F M+
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 442 IFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGE 501
+ + P+ +HY+C+VDL GR+G L EA + ++SMP D VWG L ACRLH NV + E
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 502 RAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLL 561
A+ KL++LDP +SG YVL++N + ++ WE KVR +M+ER V+K PG S IE+N
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRT 792
Query: 562 YEFIVRDKSHPELEQIYDCLVQL 584
+ F+ D +HPE IY L L
Sbjct: 793 HLFVSGDVNHPESSHIYSLLNSL 815
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 219/466 (46%), Gaps = 60/466 (12%)
Query: 46 WNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGH- 104
WN I F+ G + +A+ Y +ML G PD T+P L K C +L F G +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKML-CFGVSPDVSTFPCLVKACVALK-NFKGIDFLSDT 163
Query: 105 VLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREA 164
V LG D + +V +++I ++ G + + +FD ++ V WN ++NG+ + G
Sbjct: 164 VSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 165 IRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDM 224
I+ F M+++++ P+ VT ++S CA ++LG ++H + SG+ + N+L+ M
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 225 YVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAII 284
Y KCG+ + A ++F M V+ MI GY + G ++
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME--------------------- 322
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFN 344
E+L F+EM ++G+ PDA+T L + S+ L+ IH +I + + +
Sbjct: 323 ----------ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 345 LNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEM 404
L++ L +AL+D Y KC ++ A +F + + + +TA+I G +G +D++ F +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 405 IGVGLMPDEITFLGILSAC-----------CHGGLVDEGRKYFAQMSSIFRLSPKLKHYS 453
+ V + P+EIT + IL HG ++ +G F +I
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG---FDNRCNI----------G 479
Query: 454 C-MVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVS 498
C ++D+ + G + A ++ + D+V W ++ C N S
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPS 524
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 33/341 (9%)
Query: 84 LLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVR 143
LL + C++ L G ++ ++ D Y ++ ++ CG +F +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 144 --NLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGRE 201
++ WNS+I+ FVR+G +A+ + M V PD T +V AC L++
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 202 IHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGF 261
+ +S G+ +A++L+ Y++ GK++ ++FD ++ K V M+ GYAK G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 262 LDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSA 321
LD ++I G F M+ I P+AVT LS
Sbjct: 220 LD------------------SVIKG-------------FSVMRMDQISPNAVTFDCVLSV 248
Query: 322 CSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTY 381
C+ +D G+ +H + + + +L+ MY+KCG A ++F M +++T+
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 382 TAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSA 422
+I G G +++++F EMI G++PD ITF +L +
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 46/332 (13%)
Query: 173 LERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLE 232
LE P +++ ++ AC+ L G+++H ++ + ++ ++ MY CG
Sbjct: 30 LEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 233 SAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKR 292
++F + DL + PWN+II +V+
Sbjct: 88 DCGKMFYRL-----------------------------DLRRSSIRPWNSIISSFVRNGL 118
Query: 293 SKEALALFHEMQATGIKPDAVTTVHCL-SACSQLGALDDGIWIHRFIEKENFNLNVVLGT 351
+ALA + +M G+ PD V+T CL AC L ++ + + N + +
Sbjct: 119 LNQALAFYFKMLCFGVSPD-VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVAS 177
Query: 352 ALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMP 411
+L+ Y + G I ++F + +++ + + ++ G A G I FS M + P
Sbjct: 178 SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISP 237
Query: 412 DEITFLGILSACCHGGLVDEGRKY--FAQMSSI-FRLSPKLKHYSCMVDLLGRSGLLEEA 468
+ +TF +LS C L+D G + +S + F S K + ++ + + G ++A
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK----NSLLSMYSKCGRFDDA 293
Query: 469 EQLIRSMPMAADVVVWGALFFACRLHGNVSIG 500
+L R M AD V W C + G V G
Sbjct: 294 SKLFRMMS-RADTVTWN-----CMISGYVQSG 319
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 358 bits (920), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 323/574 (56%), Gaps = 18/574 (3%)
Query: 4 TGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFS---------WNVAIRGFL 54
TG+I + +R++ A S L + +F+ + SFS WN I+
Sbjct: 38 TGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHS 97
Query: 55 ETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDM 114
R+A+ L ML NG D F+ L+ K C+ LG G +I G + K G D+
Sbjct: 98 HGKDPRQALLLLCLMLENG-VSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDL 156
Query: 115 YVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLE 174
++ N +I +++ CG LGL+ +FD R+ VS+NS+I+G+V+ G A LF M +E
Sbjct: 157 FLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME 216
Query: 175 RVEPDEVTMIGMVSACAQLED-LNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLES 233
+ ++ M+S AQ D +++ ++ + E L N+++D YVK G++E
Sbjct: 217 M--KNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISW----NSMIDGYVKHGRIED 270
Query: 234 AEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRS 293
A+ +FD M + VV+ TMI GYAK GF+ A+ +FD +P + VV +N+++ GYVQ K
Sbjct: 271 AKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYH 330
Query: 294 KEALALFHEMQA-TGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTA 352
EAL +F +M+ + + PD T V L A +QLG L I +H +I ++ F L LG A
Sbjct: 331 MEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVA 390
Query: 353 LVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPD 412
L+DMY+KCG+I A+ VF + ++ + A+IGGLA+HG A ++ + L PD
Sbjct: 391 LIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPD 450
Query: 413 EITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLI 472
+ITF+G+L+AC H GLV EG F M ++ P+L+HY CMVD+L RSG +E A+ LI
Sbjct: 451 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLI 510
Query: 473 RSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWE 532
MP+ + V+W AC H GE A L+ + YVLL+NMY MW+
Sbjct: 511 EEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWK 570
Query: 533 EAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIV 566
+ +VR MM+ER +EK PGCS IE++G ++EF V
Sbjct: 571 DVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 356 bits (914), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 311/555 (56%), Gaps = 33/555 (5%)
Query: 24 ESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYP 83
+++ +D K+ + + SWN I G++ G + + ++ QML + G D T
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIV 300
Query: 84 LLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVR 143
+F CA L LG + +K F + N ++ ++ CGDL A VF E R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 144 NLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIH 203
++VS+ S+I G+ R G EA++LF +M+ E + PD T+ +++ CA+ L+ G+ +H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 204 WYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLD 263
+I E+ L + ++NALMDMY KCG ++ AE +F M K ++S T+I GY+K +
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY-- 478
Query: 264 IARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFH-EMQATGIKPDAVTTVHCLSAC 322
+ EAL+LF+ ++ PD T L AC
Sbjct: 479 -----------------------------ANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 323 SQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYT 382
+ L A D G IH +I + + + + +LVDMYAKCG + A +F ++ ++ +++T
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 383 AIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSI 442
+I G +HG +AI+ F++M G+ DEI+F+ +L AC H GLVDEG ++F M
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 443 FRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGER 502
++ P ++HY+C+VD+L R+G L +A + I +MP+ D +WGAL CR+H +V + E+
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 503 AAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLY 562
A K+ EL+P+++G YVL+AN+Y ++ WE+ ++RK + +RG+ K PGCS IE+ G +
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 563 EFIVRDKSHPELEQI 577
F+ D S+PE E I
Sbjct: 750 IFVAGDSSNPETENI 764
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 210/441 (47%), Gaps = 36/441 (8%)
Query: 47 NVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVL 106
N +R F E+G + AV L + +G D T + ++CA G E+ +
Sbjct: 65 NTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121
Query: 107 KLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIR 166
GF +D + + + ++ +CGDL A VFDE + + WN L+N +SG +I
Sbjct: 122 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIG 181
Query: 167 LFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYV 226
LF+ M VE D T + + + L ++ G ++H +I +SG + N+L+ Y+
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 227 KCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGG 286
K +++SA ++FD M + V+S WN+II G
Sbjct: 242 KNQRVDSARKVFDEMTERDVIS-------------------------------WNSIING 270
Query: 287 YVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLN 346
YV +++ L++F +M +GI+ D T V + C+ + G +H K F+
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 347 VVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIG 406
L+DMY+KCG++ A VF EM +R+ ++YT++I G A G A +A+ F EM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 407 VGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLE 466
G+ PD T +L+ C L+DEG++ + L + + ++D+ + G ++
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 467 EAEQLIRSMPMAADVVVWGAL 487
EAE + M + D++ W +
Sbjct: 450 EAELVFSEMRV-KDIISWNTI 469
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 315/582 (54%), Gaps = 43/582 (7%)
Query: 14 SRLIAFCAISESKNLDYCTKILFN--VQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLR 71
SRL+ +E +NL LFN V + FSWN I +G EA+ + M R
Sbjct: 14 SRLLHTERHTERQNL----TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM-R 68
Query: 72 NGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLG 131
P ++P K C+SL F G + G+ D++V +A+I ++ +CG L
Sbjct: 69 KLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLE 128
Query: 132 LACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVT------MIG 185
A VFDE RN+VSW S+I G+ +G +A+ LF+D+ ++ + D+ ++
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVS 188
Query: 186 MVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKT 245
++SAC+++ L IH ++ + G V + N L+D Y K G+
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE--------------- 233
Query: 246 VVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQA 305
G + +ARKIFD + +K V +N+I+ Y Q+ S EA +F +
Sbjct: 234 --------------GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 306 TGIKP-DAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIA 364
+ +A+T L A S GAL G IH + + +V++GT+++DMY KCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 365 KALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACC 424
A + F M +N ++TA+I G +HG A A+ F MI G+ P+ ITF+ +L+AC
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 425 HGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVW 484
H GL EG ++F M F + P L+HY CMVDLLGR+G L++A LI+ M M D ++W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 485 GALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEER 544
+L ACR+H NV + E + +L ELD + G Y+LL+++Y D+ W++ +VR +M+ R
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 545 GVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTR 586
G+ K PG S +E+NG ++ F++ D+ HP+ E+IY+ L +L R
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 355 bits (910), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 288/491 (58%), Gaps = 6/491 (1%)
Query: 100 EIFGHVLKLGFDVDMYVHNAVIHVFVSCGDL--GLACNVFDESCVRNLVSWNSLINGFVR 157
+I GHVL+ G D Y+ +I G A V + RN W ++I G+
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 158 SGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPL 217
G EAI ++ M+ E + P T ++ AC ++DLNLGR+ H V +
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 218 ANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYV 277
N ++DMYVKC ++ A ++FD M + V+S T +I YA+ G ++ A ++F+ LP K +
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 278 VPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRF 337
V W A++ G+ Q + +EAL F M+ +GI+ D VT +SAC+QLGA +
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 338 IEKENFNL--NVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKAL 395
+K ++ +VV+G+AL+DMY+KCGN+ +A+ VF M +N TY+++I GLA HG+A
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 396 DAISYFSEMIG-VGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSC 454
+A+ F M+ + P+ +TF+G L AC H GLVD+GR+ F M F + P HY+C
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 455 MVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQD 514
MVDLLGR+G L+EA +LI++M + VWGAL ACR+H N I E AA L EL+P
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 515 SGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCS-SIEVNGLLYEFIVRDKSHPE 573
G Y+LL+N+Y + W +VRK+++E+G++KTP S ++ NG +++F + +HP
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPM 546
Query: 574 LEQIYDCLVQL 584
+I D L +L
Sbjct: 547 SNKIQDKLEEL 557
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 177/399 (44%), Gaps = 70/399 (17%)
Query: 30 YCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVC 89
Y +++ VQ N F W IRG+ GK EA+ +Y M R P +FT+ L K C
Sbjct: 101 YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM-RKEEITPVSFTFSALLKAC 159
Query: 90 ASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWN 149
++ LG + +L +YV N +I ++V C + A VFDE R+++SW
Sbjct: 160 GTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWT 219
Query: 150 SLI-------------------------------NGFVRSGFPREAIRLFRDMQLERVEP 178
LI GF ++ P+EA+ F M+ +
Sbjct: 220 ELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279
Query: 179 DEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLT--VPLANALMDMYVKCGKLESAEE 236
DEVT+ G +SACAQL +SG + + V + +AL+DMY KCG +E A
Sbjct: 280 DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 339
Query: 237 IFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEA 296
+F SM NK V + ++MI+G A G R++EA
Sbjct: 340 VFMSMNNKNVFTYSSMILGLATHG-------------------------------RAQEA 368
Query: 297 LALFHEM-QATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLG--TAL 353
L LFH M T IKP+ VT V L ACS G +D G + + + F + T +
Sbjct: 369 LHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM-YQTFGVQPTRDHYTCM 427
Query: 354 VDMYAKCGNIAKALQVFHEMP-ERNSLTYTAIIGGLALH 391
VD+ + G + +AL++ M E + + A++G +H
Sbjct: 428 VDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 72/353 (20%)
Query: 180 EVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFD 239
E+ + ++S +LN ++IH ++ GL + + L+ K G
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLG---------- 95
Query: 240 SMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALAL 299
AR++ + + + W A+I GY + EA+A+
Sbjct: 96 -------------------VPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAM 136
Query: 300 FHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLN----VVLGTALVD 355
+ M+ I P + T L AC + L+ G H + F L V +G ++D
Sbjct: 137 YGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH----AQTFRLRGFCFVYVGNTMID 192
Query: 356 MYAKCGNIAKALQVFHEMPERNSLT-------------------------------YTAI 384
MY KC +I A +VF EMPER+ ++ +TA+
Sbjct: 193 MYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAM 252
Query: 385 IGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRK--YFAQMSSI 442
+ G A + K +A+ YF M G+ DE+T G +SAC G + AQ S
Sbjct: 253 VTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG- 311
Query: 443 FRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHG 495
+ S + S ++D+ + G +EEA + SM +V + ++ HG
Sbjct: 312 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHG 363
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 14 SRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNG 73
+ LIA A + N++ ++ ++ + +W + GF + K +EA++ + +M ++
Sbjct: 219 TELIA--AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS- 275
Query: 74 GTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYV--HNAVIHVFVSCGDLG 131
G R D T CA LG K G+ +V +A+I ++ CG++
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 132 LACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLE-RVEPDEVTMIGMVSAC 190
A NVF +N+ +++S+I G G +EA+ LF M + ++P+ VT +G + AC
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 191 AQLEDLNLGREIHWYISES-GLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
+ ++ GR++ + ++ G+ T ++D+ + G+L+ A E+ +M
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 322/627 (51%), Gaps = 80/627 (12%)
Query: 3 ITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREA 62
+TG IS+ F + L+A S ++L K+ + + SWN I + + GK + A
Sbjct: 155 VTGFISNVFVGNALVAM--YSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 63 VDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIH 122
++++ +M G RPDN T + CASLG LG ++ + +M+V N ++
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 123 VFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVE----- 177
++ CG + A VF V+++VSWN+++ G+ + G +A+RLF MQ E+++
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 178 ------------------------------PDEVTMIGMVSACAQLEDLNLGREIHWY-- 205
P+EVT+I ++S CA + L G+EIH Y
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 206 -----ISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFG 260
+ ++G + N L+DMY KC K+
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKV----------------------------- 423
Query: 261 FLDIARKIFDDLP--EKYVVPWNAIIGGYVQAKRSKEALALFHEM--QATGIKPDAVTTV 316
D AR +FD L E+ VV W +IGGY Q + +AL L EM + +P+A T
Sbjct: 424 --DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 317 HCLSACSQLGALDDGIWIHRFIEKENFN-LNVVLGTALVDMYAKCGNIAKALQVFHEMPE 375
L AC+ L AL G IH + + N + + + L+DMYAKCG+I+ A VF M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 376 RNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKY 435
+N +T+T+++ G +HG +A+ F EM +G D +T L +L AC H G++D+G +Y
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 436 FAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHG 495
F +M ++F +SP +HY+C+VDLLGR+G L A +LI MPM VVW A CR+HG
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 496 NVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSI 555
V +GE AA K+ EL G Y LL+N+Y ++ W++ ++R +M +GV+K PGCS +
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 556 EVNGLLYEFIVRDKSHPELEQIYDCLV 582
E F V DK+HP ++IY L+
Sbjct: 722 EGIKGTTTFFVGDKTHPHAKEIYQVLL 748
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 244/477 (51%), Gaps = 20/477 (4%)
Query: 36 FNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLR 95
F + + WN IR + + G + + L+ M T PDN+T+P +FK C +
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT-PDNYTFPFVFKACGEISSV 143
Query: 96 FLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGF 155
G L GF +++V NA++ ++ C L A VFDE V ++VSWNS+I +
Sbjct: 144 RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 156 VRSGFPREAIRLFRDMQLE-RVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLT 214
+ G P+ A+ +F M E PD +T++ ++ CA L +LG+++H + S +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 215 VPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPE 274
+ + N L+DMY KCG ++ A +F +M K VVS M+ GY++ G + A ++F+ + E
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 275 KY----VVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDD 330
+ VV W+A I GY Q EAL + +M ++GIKP+ VT + LS C+ +GAL
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 331 GIWIHRFIEKENFNL--------NVVLGTALVDMYAKCGNIAKALQVFHEMP--ERNSLT 380
G IH + K +L N+V+ L+DMYAKC + A +F + ER+ +T
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 381 YTAIIGGLALHGKALDAISYFSEMI--GVGLMPDEITFLGILSACCHGGLVDEGRKYFAQ 438
+T +IGG + HG A A+ SEM P+ T L AC + G++ A
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 439 MSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHG 495
+ + L +C++D+ + G + +A + +M MA + V W +L +HG
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 14/299 (4%)
Query: 197 NLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVS---CTTMI 253
N + H YI S + + P KC + + I +++ +++ + +I
Sbjct: 9 NAAAKSHQYIKVSLFSTSAPEITP--PFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLI 66
Query: 254 VGYAKFGFLDIARKIFDDLP--EKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPD 311
Y G L A + P + V WN++I Y + + L LF M + PD
Sbjct: 67 STYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPD 126
Query: 312 AVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFH 371
T AC ++ ++ G H F NV +G ALV MY++C +++ A +VF
Sbjct: 127 NYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 372 EMPERNSLTYTAIIGGLALHGKALDAISYFSEMIG-VGLMPDEITFLGILSACCHGGLVD 430
EM + +++ +II A GK A+ FS M G PD IT + +L C G
Sbjct: 187 EMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS 246
Query: 431 EGRKY--FAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGAL 487
G++ FA S + + + +C+VD+ + G+++EA + +M + DVV W A+
Sbjct: 247 LGKQLHCFAVTSEMIQ---NMFVGNCLVDMYAKCGMMDEANTVFSNMSV-KDVVSWNAM 301
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/448 (39%), Positives = 274/448 (61%), Gaps = 4/448 (0%)
Query: 138 DESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLN 197
++S VSW S IN R+G EA + F DM L VEP+ +T I ++S C +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 198 --LGREIHWYISESGLTLT-VPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIV 254
LG +H Y + GL V + A++ MY K G+ + A +FD M +K V+ TMI
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 255 GYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVT 314
GY + G +D A K+FD +PE+ ++ W A+I G+V+ +EAL F EMQ +G+KPD V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 315 TVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMP 374
+ L+AC+ LGAL G+W+HR++ ++F NV + +L+D+Y +CG + A QVF+ M
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 375 ERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRK 434
+R +++ ++I G A +G A +++ YF +M G PD +TF G L+AC H GLV+EG +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 435 YFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLH 494
YF M +R+SP+++HY C+VDL R+G LE+A +L++SMPM + VV G+L AC H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 495 G-NVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCS 553
G N+ + ER L +L+ + YV+L+NMY WE A K+R+ M+ G++K PG S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 554 SIEVNGLLYEFIVRDKSHPELEQIYDCL 581
SIE++ ++ F+ D +H E I + L
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVL 476
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 68/389 (17%)
Query: 43 SFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASL--GLRFLGYE 100
+ SW I G++ EA + M G P++ T+ L C G LG
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTL-AGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 101 IFGHVLKLGFD----------VDMYVH----------------------NAVIHVFVSCG 128
+ G+ KLG D + MY N +I ++ G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 129 DLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVS 188
+ A +FD+ R+L+SW ++INGFV+ G+ EA+ FR+MQ+ V+PD V +I ++
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 189 ACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVS 248
AC L L+ G +H Y+ V ++N+L+D+Y +CG +E A ++F +M +TVVS
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 249 CTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGI 308
++IVG+A G + E+L F +MQ G
Sbjct: 275 WNSVIVGFAANG-------------------------------NAHESLVYFRKMQEKGF 303
Query: 309 KPDAVTTVHCLSACSQLGALDDGIWIHRFIEKE-NFNLNVVLGTALVDMYAKCGNIAKAL 367
KPDAVT L+ACS +G +++G+ + ++ + + + LVD+Y++ G + AL
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 368 QVFHEMPER-NSLTYTAIIGGLALHGKAL 395
++ MP + N + +++ + HG +
Sbjct: 364 KLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 24 ESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYP 83
S +D K+ + + SW I GF++ G EA+ +++M + G +PD
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYVAII 210
Query: 84 LLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVR 143
C +LG G + +VL F ++ V N++I ++ CG + A VF R
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 144 NLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLG-REI 202
+VSWNS+I GF +G E++ FR MQ + +PD VT G ++AC+ + + G R
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 203 HWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
+ ++ + L+D+Y + G+LE A ++ SM
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 62/228 (27%)
Query: 28 LDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFK 87
+++ ++ +N++ SWN I GF G E++ +++M + G +PD T+
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM-QEKGFKPDAVTFTGALT 315
Query: 88 VCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS 147
C+ +GL G F ++K + + + +
Sbjct: 316 ACSHVGLVEEGLRYF-QIMKCDYRISPRIEH----------------------------- 345
Query: 148 WNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACA--------------QL 193
+ L++ + R+G +A++L + M + +P+EV + +++AC+ L
Sbjct: 346 YGCLVDLYSRAGRLEDALKLVQSMPM---KPNEVVIGSLLAACSNHGNNIVLAERLMKHL 402
Query: 194 EDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
DLN+ ++ I L +MY GK E A ++ M
Sbjct: 403 TDLNVKSHSNYVI--------------LSNMYAADGKWEGASKMRRKM 436
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 39/184 (21%)
Query: 367 LQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSAC--- 423
+Q ++ ++++T+ I L +G+ +A FS+M G+ P+ ITF+ +LS C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 424 ---------------CHGGL---------------VDEGRKYFAQMSSIFRLSPKLKHYS 453
C GL GR A++ + ++
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 454 CMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQ 513
M+D RSG ++ A ++ MP D++ W A+ ++G V G + L + Q
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMP-ERDLISWTAM-----INGFVKKGYQEEALLWFREMQ 198
Query: 514 DSGI 517
SG+
Sbjct: 199 ISGV 202
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 320/587 (54%), Gaps = 14/587 (2%)
Query: 6 LISHGFAPSRLIAFCAISESKNLDYCTKILFN-VQNPNSFSWNVAIRGFLETGKMREAVD 64
LI F SRLI F AI+ +NLD + N NPN F +N I + E
Sbjct: 62 LICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFG 119
Query: 65 LYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLG-FDVDMYVHNAVIHV 123
LY M+R+ PD T+ L K + L +I H++ G + Y+ N+++
Sbjct: 120 LYSSMIRHR-VSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKF 175
Query: 124 FVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTM 183
++ G+ G+A VF ++ S+N +I G+ + GF EA++L+ M + +EPDE T+
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTV 235
Query: 184 IGMVSACAQLEDLNLGREIHWYISESG--LTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
+ ++ C L D+ LG+ +H +I G + + L+NAL+DMY KC + A+ FD+M
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAM 295
Query: 242 VNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEAL-ALF 300
K + S TM+VG+ + G ++ A+ +FD +P++ +V WN+++ GY + + + LF
Sbjct: 296 KKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF 355
Query: 301 HEMQ-ATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAK 359
+EM +KPD VT V +S + G L G W+H + + + L +AL+DMY K
Sbjct: 356 YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCK 415
Query: 360 CGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGI 419
CG I +A VF E++ +T++I GLA HG A+ F M G+ P+ +T L +
Sbjct: 416 CGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 420 LSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLI-RSMPMA 478
L+AC H GLV+EG F M F P+ +HY +VDLL R+G +EEA+ ++ + MPM
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 479 ADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVR 538
+WG++ ACR ++ E A +LL+L+P+ G YVLL+N+Y W + K R
Sbjct: 536 PSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTR 595
Query: 539 KMMEERGVEKTPGCSSIEVNGLLYEFIVRDK-SHPELEQIYDCLVQL 584
+ ME RGV+KT G SS+ L+ F+ +K +HP +I L L
Sbjct: 596 EAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/476 (37%), Positives = 295/476 (61%), Gaps = 10/476 (2%)
Query: 112 VDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDM 171
+++ +H A + S G + + +F ++ +L + + IN +G +A L+ +
Sbjct: 66 LNLKLHRA----YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL 121
Query: 172 QLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKL 231
+ P+E T ++ +C+ G+ IH ++ + GL + +A L+D+Y K G +
Sbjct: 122 LSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDV 177
Query: 232 ESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAK 291
SA+++FD M +++VS T MI YAK G ++ AR +FD + E+ +V WN +I GY Q
Sbjct: 178 VSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 237
Query: 292 RSKEALALFHEMQATG-IKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLG 350
+AL LF ++ A G KPD +T V LSACSQ+GAL+ G WIH F++ LNV +
Sbjct: 238 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVC 297
Query: 351 TALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGV-GL 409
T L+DMY+KCG++ +A+ VF++ P ++ + + A+I G A+HG + DA+ F+EM G+ GL
Sbjct: 298 TGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGL 357
Query: 410 MPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAE 469
P +ITF+G L AC H GLV+EG + F M + + PK++HY C+V LLGR+G L+ A
Sbjct: 358 QPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
Query: 470 QLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSN 529
+ I++M M AD V+W ++ +C+LHG+ +G+ A L+ L+ ++SGIYVLL+N+Y
Sbjct: 418 ETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVG 477
Query: 530 MWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLT 585
+E KVR +M+E+G+ K PG S+IE+ ++EF D+ H + ++IY L +++
Sbjct: 478 DYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKIS 533
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 183/388 (47%), Gaps = 71/388 (18%)
Query: 40 NPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGY 99
+P+ F + AI G +A LY Q+L + P+ FT+ L K C++ G
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLL-SSEINPNEFTFSSLLKSCSTKS----GK 146
Query: 100 EIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDE-------------------- 139
I HVLK G +D YV ++ V+ GD+ A VFD
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 140 -----------SCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLE-RVEPDEVTMIGMV 187
C R++VSWN +I+G+ + GFP +A+ LF+ + E + +PDE+T++ +
Sbjct: 207 NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 188 SACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVV 247
SAC+Q+ L GR IH ++ S + L V + L+DMY KCG LE A +F+ K +V
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIV 326
Query: 248 SCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQA-T 306
+ MI GYA G+ S++AL LF+EMQ T
Sbjct: 327 AWNAMIAGYAMHGY-------------------------------SQDALRLFNEMQGIT 355
Query: 307 GIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKE-NFNLNVVLGTALVDMYAKCGNIAK 365
G++P +T + L AC+ G +++GI I + +E + LV + + G + +
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 366 ALQVFHEMP-ERNSLTYTAIIGGLALHG 392
A + M + +S+ +++++G LHG
Sbjct: 416 AYETIKNMNMDADSVLWSSVLGSCKLHG 443
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/451 (40%), Positives = 275/451 (60%), Gaps = 10/451 (2%)
Query: 148 WNSLINGFVR---SGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHW 204
WN +I V S I ++ M+ RV PD T ++ + L LG+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 205 YISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDI 264
I GL + +L++MY CG L SA+ +FD +K + + +++ YAK G +D
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 265 ARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATG-----IKPDAVTTVHCL 319
ARK+FD++PE+ V+ W+ +I GYV + KEAL LF EMQ ++P+ T L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 320 SACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSL 379
SAC +LGAL+ G W+H +I+K + +++VLGTAL+DMYAKCG++ +A +VF+ + + +
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 380 -TYTAIIGGLALHGKALDAISYFSEMIGV-GLMPDEITFLGILSACCHGGLVDEGRKYFA 437
Y+A+I LA++G + FSEM + P+ +TF+GIL AC H GL++EG+ YF
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 438 QMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNV 497
M F ++P ++HY CMVDL GRSGL++EAE I SMPM DV++WG+L R+ G++
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 498 SIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEV 557
E A +L+ELDP +SG YVLL+N+Y + W E +R ME +G+ K PGCS +EV
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 558 NGLLYEFIVRDKSHPELEQIYDCLVQLTRHF 588
G+++EF+V D+S E E+IY L ++ +
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRL 477
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 178/393 (45%), Gaps = 75/393 (19%)
Query: 43 SFSWNVAIRGFLE---TGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGY 99
SF WN+ IR + + + + +Y +M RN PD T+P L + LG
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 100 EIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNS--------- 150
+L G D D +V ++++++ SCGDL A VFD+S ++L +WNS
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 151 ----------------------LINGFVRSGFPREAIRLFRDMQLER-----VEPDEVTM 183
LING+V G +EA+ LFR+MQL + V P+E TM
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 184 IGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM-V 242
++SAC +L L G+ +H YI + + + + L AL+DMY KCG LE A+ +F+++
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 243 NKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHE 302
K V + + MI A +G D E LF E
Sbjct: 263 KKDVKAYSAMICCLAMYGLTD-------------------------------ECFQLFSE 291
Query: 303 MQAT-GIKPDAVTTVHCLSACSQLGALDDG-IWIHRFIEKENFNLNVVLGTALVDMYAKC 360
M + I P++VT V L AC G +++G + IE+ ++ +VD+Y +
Sbjct: 292 MTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 361 GNIAKALQVFHEMP-ERNSLTYTAIIGGLALHG 392
G I +A MP E + L + +++ G + G
Sbjct: 352 GLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 15/301 (4%)
Query: 21 AISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQML----RNGGTR 76
A +++ +D K+ + N SW+ I G++ GK +EA+DL+++M R
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 77 PDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNV 136
P+ FT + C LG G + ++ K ++D+ + A+I ++ CG L A V
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 137 FDE-SCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQL-ERVEPDEVTMIGMVSACAQLE 194
F+ +++ +++++I G E +LF +M + + P+ VT +G++ AC
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 195 DLNLGRE-IHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM-VNKTVVSCTTM 252
+N G+ I E G+T ++ ++D+Y + G ++ AE SM + V+ ++
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 253 IVGYAKFGFLDIARKIFDDLPEKYVVPWNA-----IIGGYVQAKRSKEALALFHEMQATG 307
+ G G + L E + P N+ + Y + R E + HEM+ G
Sbjct: 377 LSGSRMLGDIKTCEGALKRLIE--LDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKG 434
Query: 308 I 308
I
Sbjct: 435 I 435
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 289/504 (57%), Gaps = 40/504 (7%)
Query: 120 VIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPD 179
++ + S D+ A VFDE RN++ N +I +V +GF E +++F M V PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 180 EVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFD 239
T ++ AC+ + +GR+IH ++ GL+ T+ + N L+ MY KCG L A + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 240 SMVNKTVVSCTTMIVGYAKFGFLDIA---------------------------------- 265
M + VVS +++VGYA+ D A
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 266 ---RKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSAC 322
+ +F + +K +V WN +IG Y++ EA+ L+ M+A G +PDAV+ L AC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 323 SQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYT 382
AL G IH +IE++ N++L AL+DMYAKCG + KA VF M R+ +++T
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 383 AIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSI 442
A+I G+ DA++ FS++ GL+PD I F+ L+AC H GL++EGR F M+
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 443 FRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGER 502
++++P+L+H +CMVDLLGR+G ++EA + I+ M M + VWGAL ACR+H + IG
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 503 AAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLY 562
AA KL +L P+ SG YVLL+N+Y + WEE +R +M+ +G++K PG S++EVN +++
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 563 EFIVRDKSHPELEQIY---DCLVQ 583
F+V D+SHP+ ++IY D LV+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVK 583
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 154/387 (39%), Gaps = 53/387 (13%)
Query: 171 MQLERVEPDE-VTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCG 229
++L++ P E V ++G V D+ R +H I L L LM Y
Sbjct: 31 LELDQKSPQETVFLLGQV--LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLK 88
Query: 230 KLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQ 289
+ SA ++FD + + V+ MI Y GF
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYG-------------------------- 122
Query: 290 AKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVL 349
E + +F M ++PD T L ACS G + G IH K + + +
Sbjct: 123 -----EGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 350 GTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGL 409
G LV MY KCG +++A V EM R+ +++ +++ G A + + DA+ EM V +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 410 MPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPK-LKHYSCMVDLLGRSGLLEEA 468
D T +L A E Y M F++ K L ++ M+ + ++ + EA
Sbjct: 238 SHDAGTMASLLPAV--SNTTTENVMYVKDM--FFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 469 EQLIRSMP---MAADVVVWGALFFACRLHGNVSIGER--AAMKLLELDPQDSGIYVLLAN 523
+L M D V ++ AC +S+G++ ++ +L P +LL N
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN-----LLLEN 348
Query: 524 ----MYRDSNMWEEAGKVRKMMEERGV 546
MY E+A V + M+ R V
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDV 375
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 296/520 (56%), Gaps = 5/520 (0%)
Query: 69 MLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCG 128
M +G +N+ P L +V + + + I H G ++ ++
Sbjct: 1 MAFHGIREVENYFIPFLQRVKSRNEWKKINASIIIH----GLSQSSFMVTKMVDFCDKIE 56
Query: 129 DLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVE-PDEVTMIGMV 187
D+ A +F++ N+ +NS+I + + + IR+++ + + E PD T M
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 188 SACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVV 247
+CA L LG+++H ++ + G V NAL+DMY+K L A ++FD M + V+
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 248 SCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATG 307
S +++ GYA+ G + A+ +F + +K +V W A+I GY EA+ F EMQ G
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 308 IKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKAL 367
I+PD ++ + L +C+QLG+L+ G WIH + E+ F + AL++MY+KCG I++A+
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 368 QVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGG 427
Q+F +M ++ ++++ +I G A HG A AI F+EM + P+ ITFLG+LSAC H G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 428 LVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGAL 487
+ EG +YF M +++ PK++HY C++D+L R+G LE A ++ ++MPM D +WG+L
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 488 FFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVE 547
+CR GN+ + A L+EL+P+D G YVLLAN+Y D WE+ ++RKM+ ++
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 548 KTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTRH 587
KTPG S IEVN ++ EF+ D S P +I L T H
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSH 516
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 206/411 (50%), Gaps = 71/411 (17%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMR 60
+ I GL F ++++ FC + +++DY T++ V NPN F +N IR +
Sbjct: 33 IIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYC 90
Query: 61 EAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAV 120
+ + +YKQ+LR PD FT+P +FK CASLG +LG ++ GH+ K G + NA+
Sbjct: 91 DVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENAL 150
Query: 121 IHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPR------------------ 162
I +++ DL A VFDE R+++SWNSL++G+ R G +
Sbjct: 151 IDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWT 210
Query: 163 -------------EAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISES 209
EA+ FR+MQL +EPDE+++I ++ +CAQL L LG+ IH Y
Sbjct: 211 AMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR 270
Query: 210 GLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIF 269
G + NAL++MY KCG + A ++F M K V+S +TMI GYA G
Sbjct: 271 GFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG--------- 321
Query: 270 DDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALD 329
+ A+ F+EMQ +KP+ +T + LSACS +G
Sbjct: 322 ----------------------NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 330 DGIWIHRFIE--KENFNLNVVLGT--ALVDMYAKCGNIAKALQVFHEMPER 376
+G+ R+ + ++++ + + L+D+ A+ G + +A+++ MP +
Sbjct: 360 EGL---RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 266/450 (59%), Gaps = 2/450 (0%)
Query: 130 LGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDM--QLERVEPDEVTMIGMV 187
L A + D S L + NS+I +S P ++ +R + ++PD T+ +V
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 188 SACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVV 247
AC L G ++H G + L+ +Y + G L+S ++F+S+ V
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 248 SCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATG 307
T M+ A+ G + ARK+F+ +PE+ + WNA+I GY Q S+EAL +FH MQ G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 308 IKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKAL 367
+K + V + LSAC+QLGALD G W H +IE+ + V L T LVD+YAKCG++ KA+
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 368 QVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGG 427
+VF M E+N T+++ + GLA++G + FS M G+ P+ +TF+ +L C G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 428 LVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGAL 487
VDEG+++F M + F + P+L+HY C+VDL R+G LE+A +I+ MPM VW +L
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 488 FFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVE 547
A R++ N+ +G A+ K+LEL+ + G YVLL+N+Y DSN W+ VR+ M+ +GV
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 548 KTPGCSSIEVNGLLYEFIVRDKSHPELEQI 577
K PGCS +EVNG ++EF V DKSHP+ QI
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQI 505
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 191/408 (46%), Gaps = 66/408 (16%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMR 60
+ + G + + A+S+ K LDY +IL + P F+ N IR ++
Sbjct: 29 LYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPE 88
Query: 61 EAVDLYKQMLRNGGT-RPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNA 119
++ D Y+++L +G +PDN+T L + C L +R G ++ G ++ GFD D +V
Sbjct: 89 KSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTG 148
Query: 120 VIHVFVS-------------------------------CGDLGLACNVFDESCVRNLVSW 148
+I ++ CGD+ A +F+ R+ ++W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 149 NSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISE 208
N++I+G+ + G REA+ +F MQLE V+ + V MI ++SAC QL L+ GR H YI
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 209 SGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKI 268
+ + +TV LA L+D+Y KCG +E A E+F M K V + ++ + G A GF
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGF------- 321
Query: 269 FDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGAL 328
++ L LF M+ G+ P+AVT V L CS +G +
Sbjct: 322 ------------------------GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 329 DDGIWIHRFIEKENFNLNVVLGT--ALVDMYAKCGNIAKALQVFHEMP 374
D+G H + F + L LVD+YA+ G + A+ + +MP
Sbjct: 358 DEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP 404
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/571 (34%), Positives = 306/571 (53%), Gaps = 37/571 (6%)
Query: 16 LIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGT 75
L A CA E+ LDY + N WNV + + +R + +++QM +
Sbjct: 433 LYAKCADIETA-LDY----FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEI 486
Query: 76 RPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACN 135
P+ +TYP + K C LG LG +I ++K F ++ YV + +I ++ G L A +
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 136 VFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLED 195
+ +++VSW ++I G+ + F +A+ FR M + DEV + VSACA L+
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 196 LNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVG 255
L G++IH SG + +P NAL+ +Y +CGK+E +
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES--------------------- 645
Query: 256 YAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTT 315
Y F + I WNA++ G+ Q+ ++EAL +F M GI + T
Sbjct: 646 YLAFEQTEAGDNI----------AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 316 VHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPE 375
+ A S+ + G +H I K ++ + AL+ MYAKCG+I+ A + F E+
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 376 RNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKY 435
+N +++ AII + HG +A+ F +MI + P+ +T +G+LSAC H GLVD+G Y
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 436 FAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHG 495
F M+S + LSPK +HY C+VD+L R+GLL A++ I+ MP+ D +VW L AC +H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 496 NVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSI 555
N+ IGE AA LLEL+P+DS YVLL+N+Y S W+ R+ M+E+GV+K PG S I
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 556 EVNGLLYEFIVRDKSHPELEQIYDCLVQLTR 586
EV ++ F V D++HP ++I++ LT+
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 966
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 222/469 (47%), Gaps = 34/469 (7%)
Query: 27 NLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLF 86
NL I N+ ++ ++N I G + G +A++L+K+M +G PD+ T L
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLV 396
Query: 87 KVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLV 146
C++ G F G ++ + KLGF + + A+++++ C D+ A + F E+ V N+V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 147 SWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYI 206
WN ++ + R + R+FR MQ+E + P++ T ++ C +L DL LG +IH I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 207 SESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIAR 266
++ L + + L+DMY K GKL++A +I K VVS TTMI GY ++ F D
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD--- 573
Query: 267 KIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLG 326
+AL F +M GI+ D V + +SAC+ L
Sbjct: 574 ----------------------------KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 327 ALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIG 386
AL +G IH F+ ++ ALV +Y++CG I ++ F + +++ + A++
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665
Query: 387 GLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLS 446
G G +A+ F M G+ + TF + A + +G++ A ++
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYD 724
Query: 447 PKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHG 495
+ + + ++ + + G + +AE+ + + V W A+ A HG
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHG 772
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 219/469 (46%), Gaps = 34/469 (7%)
Query: 28 LDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFK 87
+D ++ ++ + SW I G + EA+ L+ M G P + + +
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLS 296
Query: 88 VCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS 147
C + +G ++ G VLKLGF D YV NA++ ++ G+L A ++F R+ V+
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 148 WNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYIS 207
+N+LING + G+ +A+ LF+ M L+ +EPD T+ +V AC+ L G+++H Y +
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 208 ESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARK 267
+ G + AL+++Y KC +E+A + F + VV M+V Y
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG---------- 466
Query: 268 IFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGA 327
+ DDL + + +F +MQ I P+ T L C +LG
Sbjct: 467 LLDDL---------------------RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 328 LDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGG 387
L+ G IH I K NF LN + + L+DMYAK G + A + ++ +++T +I G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 388 LALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSP 447
+ A++ F +M+ G+ DE+ +SAC + EG++ AQ + + S
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ-ACVSGFSS 624
Query: 448 KLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGN 496
L + +V L R G +EE+ L A D + W AL + GN
Sbjct: 625 DLPFQNALVTLYSRCGKIEES-YLAFEQTEAGDNIAWNALVSGFQQSGN 672
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 204/448 (45%), Gaps = 41/448 (9%)
Query: 44 FSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRF-LGYEIF 102
F+WN I+ + E L+ +M+ T P+ T+ + + C + F + +I
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIH 210
Query: 103 GHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPR 162
+L G V N +I ++ G + LA VFD +++ SW ++I+G ++
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 163 EAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALM 222
EAIRLF DM + + P ++SAC ++E L +G ++H + + G + + NAL+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 223 DMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNA 282
+Y G L SAE I F ++ ++ V +N
Sbjct: 331 SLYFHLGNLISAEHI-------------------------------FSNMSQRDAVTYNT 359
Query: 283 IIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKEN 342
+I G Q ++A+ LF M G++PD+ T + ACS G L G +H + K
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 343 FNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFS 402
F N + AL+++YAKC +I AL F E N + + ++ L ++ F
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 403 EMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSC--MVDLLG 460
+M ++P++ T+ IL C G ++ G + +Q I + + +L Y C ++D+
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ---IIKTNFQLNAYVCSVLIDMYA 536
Query: 461 RSGLLEEA-EQLIRSMPMAADVVVWGAL 487
+ G L+ A + LIR DVV W +
Sbjct: 537 KLGKLDTAWDILIRF--AGKDVVSWTTM 562
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 190/424 (44%), Gaps = 37/424 (8%)
Query: 70 LRNGGTRPDNFTYPLLFKVC-ASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCG 128
+ N G RP++ T L + C + G G ++ +LKLG D + + + ++ G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 129 DLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVS 188
DL A VFDE R + +WN +I E LF M E V P+E T G++
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 189 AC-AQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVV 247
AC ++ +IH I GL + + N L+D+Y
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY---------------------- 232
Query: 248 SCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATG 307
++ GF+D+AR++FD L K W A+I G + + EA+ LF +M G
Sbjct: 233 ---------SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 308 IKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKAL 367
I P LSAC ++ +L+ G +H + K F+ + + ALV +Y GN+ A
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 368 QVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGG 427
+F M +R+++TY +I GL+ G A+ F M GL PD T ++ AC G
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 428 LVDEGRKYFAQMSSI-FRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGA 486
+ G++ A + + F + K++ +++L + +E A + +VV+W
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEV-ENVVLWNV 460
Query: 487 LFFA 490
+ A
Sbjct: 461 MLVA 464
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 302/544 (55%), Gaps = 33/544 (6%)
Query: 45 SWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGH 104
SWN I F ++G+ +A++L+ +M + G P++ + + C+ L G EI
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 105 VLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREA 164
+K GF++D YV++A++ ++ C L +A VF + ++LV+WNS+I G+V G +
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 165 IRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDM 224
+ + M +E P + T+ ++ AC++ +L G+ IH Y+ S + + + +L+D+
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 225 YVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAII 284
Y KCG+ ++A +F + WN +I
Sbjct: 354 YFKCGEA-------------------------------NLAETVFSKTQKDVAESWNVMI 382
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFN 344
Y+ +A+ ++ +M + G+KPD VT L ACSQL AL+ G IH I +
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLE 442
Query: 345 LNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEM 404
+ +L +AL+DMY+KCGN +A ++F+ +P+++ +++T +I HG+ +A+ F EM
Sbjct: 443 TDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Query: 405 IGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGL 464
GL PD +T L +LSAC H GL+DEG K+F+QM S + + P ++HYSCM+D+LGR+G
Sbjct: 503 QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGR 562
Query: 465 LEEAEQLIRSMPMAAD-VVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLAN 523
L EA ++I+ P +D + LF AC LH S+G+R A L+E P D+ Y++L N
Sbjct: 563 LLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFN 622
Query: 524 MYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQ 583
+Y W+ A +VR M+E G+ K PGCS IE++ + F D+SH E +Y+CL
Sbjct: 623 LYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLAL 682
Query: 584 LTRH 587
L+ H
Sbjct: 683 LSGH 686
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 229/461 (49%), Gaps = 34/461 (7%)
Query: 36 FNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLR 95
F++++ + + WN + G+ + + ++++K++L PD+FT+P + K +LG
Sbjct: 65 FDIRS-DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 96 FLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGF 155
FLG I V+K G+ D+ V ++++ ++ + VFDE R++ SWN++I+ F
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 156 VRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTV 215
+SG +A+ LF M+ EP+ V++ +SAC++L L G+EIH + G L
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 216 PLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEK 275
+ +AL+DMY KC LE +AR++F +P K
Sbjct: 244 YVNSALVDMYGKCDCLE-------------------------------VAREVFQKMPRK 272
Query: 276 YVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIH 335
+V WN++I GYV SK + + + M G +P T L ACS+ L G +IH
Sbjct: 273 SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIH 332
Query: 336 RFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKAL 395
++ + N ++ + +L+D+Y KCG A VF + + + ++ +I G
Sbjct: 333 GYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWF 392
Query: 396 DAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCM 455
A+ + +M+ VG+ PD +TF +L AC +++G++ +S RL S +
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSAL 451
Query: 456 VDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGN 496
+D+ + G +EA ++ S+P DVV W + A HG
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 165/325 (50%), Gaps = 33/325 (10%)
Query: 101 IFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS-WNSLINGFVRSG 159
+ +L LG D+ + ++I+V+ +C D A +VF+ +R+ V WNSL++G+ ++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 160 FPREAIRLF-RDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLA 218
+ + +F R + PD T ++ A L LGR IH + +SG V +A
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 219 NALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVV 278
++L+ MY AKF + + ++FD++PE+ V
Sbjct: 146 SSLVGMY-------------------------------AKFNLFENSLQVFDEMPERDVA 174
Query: 279 PWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFI 338
WN +I + Q+ +++AL LF M+++G +P++V+ +SACS+L L+ G IHR
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 339 EKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAI 398
K+ F L+ + +ALVDMY KC + A +VF +MP ++ + + ++I G G + +
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 399 SYFSEMIGVGLMPDEITFLGILSAC 423
+ MI G P + T IL AC
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMAC 319
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 334 IHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSL-TYTAIIGGLALHG 392
+H+ I +VVL +L+++Y C + A VF R+ + + +++ G + +
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 393 KALDAISYFSEMIGVGL-MPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKH 451
D + F ++ + +PD TF ++ A +G L GR++ +M I L K +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGAL---GREFLGRM--IHTLVVKSGY 138
Query: 452 Y------SCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGAL 487
S +V + + L E + Q+ MP DV W +
Sbjct: 139 VCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTV 179
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/585 (34%), Positives = 308/585 (52%), Gaps = 45/585 (7%)
Query: 42 NSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGL----RFL 97
++ +N I GF A++L+ +M ++ G +PDNFT+ V A L L
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFKPDNFTFA---SVLAGLALVADDEKQ 167
Query: 98 GYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGD----LGLACNVFDE-------------- 139
+ LK G V NA++ V+ C L A VFDE
Sbjct: 168 CVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 140 SCVRN------------------LVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEV 181
V+N LV++N++I+G+V GF +EA+ + R M +E DE
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 182 TMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
T ++ ACA L LG+++H Y+ + N+L+ +Y KCGK + A IF+ M
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 242 VNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFH 301
K +VS ++ GY G + A+ IF ++ EK ++ W +I G + +E L LF
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 302 EMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCG 361
M+ G +P + +C+ LGA +G H + K F+ ++ G AL+ MYAKCG
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 362 NIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILS 421
+ +A QVF MP +S+++ A+I L HG +A+ + EM+ G+ PD IT L +L+
Sbjct: 467 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 422 ACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADV 481
AC H GLVD+GRKYF M +++R+ P HY+ ++DLL RSG +AE +I S+P
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 482 VVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMM 541
+W AL CR+HGN+ +G AA KL L P+ G Y+LL+NM+ + WEE +VRK+M
Sbjct: 587 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 646
Query: 542 EERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTR 586
+RGV+K CS IE+ ++ F+V D SHPE E +Y L L +
Sbjct: 647 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGK 691
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 205/424 (48%), Gaps = 44/424 (10%)
Query: 113 DMYVHNAVIHVFVSCGDLGLACNVFDES--CVRNLVSWNSLINGFVRSGFPREAIRLFRD 170
D ++ + + GD+ LA VF+++ C+R+ V +N++I GF + AI LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 171 MQLERVEPDEVTMIGMVSACAQL-EDLNLGREIHWYISESGLTLTVPLANALMDMYVKCG 229
M+ E +PD T +++ A + +D + H +SG ++NAL+ +Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 230 K----LESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKY-VVPWNAII 284
L SA ++FD ++ K S TTM+ GY K G+ D+ ++ + + + +V +NA+I
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 285 GGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFI-EKENF 343
GYV +EAL + M ++GI+ D T + AC+ G L G +H ++ +E+F
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 344 NLNVVLGTALVDMYAKCGNIAKALQVFHEMP----------------------------- 374
+ + +LV +Y KCG +A +F +MP
Sbjct: 319 SFH--FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 375 --ERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEG 432
E+N L++ +I GLA +G + + FS M G P + F G + +C G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 433 RKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACR 492
++Y AQ+ I L + ++ + + G++EEA Q+ R+MP D V W AL A
Sbjct: 437 QQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNALIAALG 494
Query: 493 LHGN 496
HG+
Sbjct: 495 QHGH 498
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 170/395 (43%), Gaps = 53/395 (13%)
Query: 196 LNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVG 255
L L R +H I G + N L+D+Y K +L A ++FD + ++ TTM+ G
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 256 YAKFGFLDIARKIFDDLP--EKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAV 313
Y G + +AR +F+ P + V +NA+I G+ A+ LF +M+ G KPD
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 314 TTVHCLSACSQLGALDDG--IWIHRFIEKENFNLNVVLGTALVDMYAKCGN----IAKAL 367
T L+ + L A D+ + H K + ALV +Y+KC + + A
Sbjct: 150 TFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 368 QVFHEMPERNS--------------------------------LTYTAIIGGLALHGKAL 395
+VF E+ E++ + Y A+I G G
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 396 DAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHY-SC 454
+A+ M+ G+ DE T+ ++ AC GL+ G++ A + R H+ +
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY---VLRREDFSFHFDNS 325
Query: 455 MVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQD 514
+V L + G +EA + MP A D+V W AL L G VS G KL+ + ++
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMP-AKDLVSWNAL-----LSGYVSSGHIGEAKLIFKEMKE 379
Query: 515 SGI--YVLLANMYRDSNMWEEAGKVRKMMEERGVE 547
I ++++ + ++ EE K+ M+ G E
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 12/252 (4%)
Query: 32 TKILFN-VQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCA 90
K++F ++ N SW + I G E G E + L+ M R G P ++ + K CA
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG-FEPCDYAFSGAIKSCA 428
Query: 91 SLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNS 150
LG G + +LK+GFD + NA+I ++ CG + A VF + VSWN+
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 151 LINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESG 210
LI + G EA+ ++ +M + + PD +T++ +++AC+ ++ GR+ ++ S
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK--YFDSMET 546
Query: 211 LTLTVPLAN---ALMDMYVKCGKLESAEEIFDSMVNKTVVSC-TTMIVGYAKFGFLDI-- 264
+ P A+ L+D+ + GK AE + +S+ K ++ G G +++
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 265 --ARKIFDDLPE 274
A K+F +PE
Sbjct: 607 IAADKLFGLIPE 618
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 298/507 (58%), Gaps = 14/507 (2%)
Query: 84 LLFKVCASLGLRFLGYEIFGHVLKLGFDV--DMYVHNAVIHVFVSCGDLGLACNVFDESC 141
LL + CA G E+ + G Y+ NA+ + S G++ A +FDE
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 142 V--RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLG 199
+ ++ V W +L++ F R G +++LF +M+ +RVE D+V+++ + CA+LEDL
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 200 REIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKF 259
++ H + G+ +V + NALMDMY KCG + + IF+ + K+VVS T ++ K+
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 260 GFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQ-ATGIKPDAVTTVHC 318
L+ R++F ++PE+ V W ++ GY+ A ++E L L EM G + VT
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 319 LSACSQLGALDDGIWIHRFIEKENFNL-------NVVLGTALVDMYAKCGNIAKALQVFH 371
LSAC+Q G L G W+H + K+ + +V++GTALVDMYAKCGNI ++ VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 372 EMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDE 431
M +RN +T+ A+ GLA+HGK I F +MI + PD++TF +LSAC H G+VDE
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDE 369
Query: 432 GRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFAC 491
G + F + + L PK+ HY+CMVDLLGR+GL+EEAE L+R MP+ + VV G+L +C
Sbjct: 370 GWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 492 RLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPG 551
+HG V I ER +L+++ P ++ +L++NMY + A +R + +RG+ K PG
Sbjct: 429 SVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPG 488
Query: 552 CSSIEVNGLLYEFIVRDKSHPELEQIY 578
SSI VN ++ F D+SHP ++IY
Sbjct: 489 LSSIYVNDSVHRFSSGDRSHPRTKEIY 515
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 167/410 (40%), Gaps = 77/410 (18%)
Query: 38 VQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFL 97
+ ++ W + F G + ++ L+ +M R D+ + LF VCA L L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM-RRKRVEIDDVSVVCLFGVCAKL--EDL 127
Query: 98 GYEIFGH--VLKLGFDVDMYVHNAVIHVFVSCG--------------------------- 128
G+ GH +K+G + V NA++ ++ CG
Sbjct: 128 GFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 129 ----DLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEP-DEVTM 183
L VF E RN V+W ++ G++ +GF RE + L +M + VT+
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 184 IGMVSACAQLEDLNLGREIHWY-------ISESGLTLTVPLANALMDMYVKCGKLESAEE 236
M+SACAQ +L +GR +H Y + E V + AL+DMY KCG ++S+
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 237 IFDSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEA 296
+F M + VV+ WNA+ G + +
Sbjct: 308 VFRLMRKRNVVT-------------------------------WNALFSGLAMHGKGRMV 336
Query: 297 LALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDM 356
+ +F +M +KPD +T LSACS G +D+G + V +VD+
Sbjct: 337 IDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDL 395
Query: 357 YAKCGNIAKALQVFHEMP-ERNSLTYTAIIGGLALHGKALDAISYFSEMI 405
+ G I +A + EMP N + +++G ++HGK A E+I
Sbjct: 396 LGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELI 445
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 26 KNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLL 85
+ L+ ++ + N+ +W V + G+L G RE ++L +M+ G + T +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 86 FKVCASLGLRFLGYEIFGHVLK----LGFDV---DMYVHNAVIHVFVSCGDLGLACNVFD 138
CA G +G + + LK +G + D+ V A++ ++ CG++ + NVF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 139 ESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNL 198
RN+V+WN+L +G G R I +F M + V+PD++T ++SAC+ ++
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDE 369
Query: 199 GREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM-VNKTVVSCTTMIVGYA 257
G + GL V ++D+ + G +E AE + M V V +++ +
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 258 KFGFLDIARKIFDDLPEKYVVPWNA-----IIGGYVQAKRSKEALALFHEMQATGIK 309
G ++IA +I +L + + P N + YV RS A L ++ GI+
Sbjct: 430 VHGKVEIAERIKRELIQ--MSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIR 484
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 346 bits (887), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/566 (36%), Positives = 300/566 (53%), Gaps = 43/566 (7%)
Query: 27 NLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLF 86
++DY K+ + ++ +WN + GF ++G +A L+++M N T PD+ T L
Sbjct: 102 SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT-PDSVTVMTLI 160
Query: 87 KVCASLGLRFLGYEIFGHV-LKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFD--ESCVR 143
+ AS E V ++LG DV + V N I + CGDL A VF+ + R
Sbjct: 161 Q-SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 144 NLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIH 203
+VSWNS+ + G +A L+ M E +PD T I + ++C E L GR IH
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 204 WYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLD 263
+ G + N + MY K SA +FD M ++T
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC----------------- 322
Query: 264 IARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACS 323
V W +I GY + EALALFH M +G KPD VT + +S C
Sbjct: 323 --------------VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 324 QLGALDDGIWIHRFIE----KENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSL 379
+ G+L+ G WI + K + NV++ AL+DMY+KCG+I +A +F PE+ +
Sbjct: 369 KFGSLETGKWIDARADIYGCKRD---NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Query: 380 TYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQM 439
T+T +I G AL+G L+A+ FS+MI + P+ ITFL +L AC H G +++G +YF M
Sbjct: 426 TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Query: 440 SSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSI 499
++ +SP L HYSCMVDLLGR G LEEA +LIR+M D +WGAL AC++H NV I
Sbjct: 486 KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKI 545
Query: 500 GERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNG 559
E+AA L L+PQ + YV +AN+Y + MW+ ++R +M++R ++K PG S I+VNG
Sbjct: 546 AEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNG 605
Query: 560 LLYEFIVRDKSHPELEQIYDCLVQLT 585
+ F V + H E E IY L L+
Sbjct: 606 KNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 223/478 (46%), Gaps = 35/478 (7%)
Query: 45 SWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGH 104
+WN+ IR + E++ L+++M R GG P+NFT+P + K CA L + H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKR-GGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 105 VLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREA 164
++K F D++V A + +FV C + A VF+ R+ +WN++++GF +SG +A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 165 IRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDM 224
LFR+M+L + PD VT++ ++ + + + L L +H G+ + V +AN +
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 225 YVKCGKLESAEEIFDSMV--NKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNA 282
Y KCG L+SA+ +F+++ ++TVVS +M Y+ FG + FD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG------EAFD------------ 239
Query: 283 IIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKEN 342
A L+ M KPD T ++ ++C L G IH
Sbjct: 240 -------------AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG 286
Query: 343 FNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFS 402
+ ++ + MY+K + A +F M R +++T +I G A G +A++ F
Sbjct: 287 TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 403 EMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRS 462
MI G PD +T L ++S C G ++ G+ A+ + + ++D+ +
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 463 GLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVL 520
G + EA + + P VV W + L+G + K+++LD + + I L
Sbjct: 407 GSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 289/513 (56%), Gaps = 34/513 (6%)
Query: 74 GTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLA 133
G DN + C++ G Y +F H + Y+HN +I A
Sbjct: 42 GLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPC----PNTYLHNTMIR----------A 87
Query: 134 CNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQL 193
++ DE ++ AI ++R + +PD T ++ ++
Sbjct: 88 LSLLDEPNAHSI------------------AITVYRKLWALCAKPDTFTFPFVLKIAVRV 129
Query: 194 EDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMI 253
D+ GR+IH + G +V + L+ MY CG L A ++FD M+ K V ++
Sbjct: 130 SDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALL 189
Query: 254 VGYAKFGFLDIARKIFDDLP--EKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPD 311
GY K G +D AR + + +P + V W +I GY ++ R+ EA+ +F M ++PD
Sbjct: 190 AGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPD 249
Query: 312 AVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFH 371
VT + LSAC+ LG+L+ G I +++ N V L A++DMYAK GNI KAL VF
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 372 EMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDE 431
+ ERN +T+T II GLA HG +A++ F+ M+ G+ P+++TF+ ILSAC H G VD
Sbjct: 310 CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDL 369
Query: 432 GRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFAC 491
G++ F M S + + P ++HY CM+DLLGR+G L EA+++I+SMP A+ +WG+L A
Sbjct: 370 GKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAAS 429
Query: 492 RLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPG 551
+H ++ +GERA +L++L+P +SG Y+LLAN+Y + W+E+ +R MM+ GV+K G
Sbjct: 430 NVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAG 489
Query: 552 CSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQL 584
SSIEV +Y+FI D +HP++E+I++ L ++
Sbjct: 490 ESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 200/429 (46%), Gaps = 72/429 (16%)
Query: 1 MTITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFL---ETG 57
M ITGL ++ I C S + +L Y + + PN++ N IR E
Sbjct: 38 MIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPN 95
Query: 58 KMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVH 117
A+ +Y++ L +PD FT+P + K+ + + G +I G V+ GFD ++V
Sbjct: 96 AHSIAITVYRK-LWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 118 NAVIHVFVSCGDLGLACNVFDE--------------------------------SC-VRN 144
+I ++ SCG LG A +FDE C VRN
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 145 LVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHW 204
VSW +I+G+ +SG EAI +F+ M +E VEPDEVT++ ++SACA L L LG I
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 205 YISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDI 264
Y+ G+ V L NA++DMY K G + A ++F+ + + VV+ TT+I G A G
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG---- 330
Query: 265 ARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQ 324
EALA+F+ M G++P+ VT + LSACS
Sbjct: 331 ---------------------------HGAEALAMFNRMVKAGVRPNDVTFIAILSACSH 363
Query: 325 LGALDDGIWI-HRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMP-ERNSLTYT 382
+G +D G + + K + N+ ++D+ + G + +A +V MP + N+ +
Sbjct: 364 VGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 383 AIIGGLALH 391
+++ +H
Sbjct: 424 SLLAASNVH 432
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 313/585 (53%), Gaps = 44/585 (7%)
Query: 46 WNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHV 105
WN ++ + G A++LY+ M R G D + PL+ + C LG L V
Sbjct: 126 WNSILKANVSHGLYENALELYRGM-RQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 106 LKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAI 165
+++G +++V N ++ ++ G +G A N+F E VRN +SWN +I GF + A+
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 166 RLFRDMQLERVEPDEVTMIGMVS-----------------------------------AC 190
++F MQ E +PDEVT ++S C
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 191 AQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCT 250
A+LE L++ ++H Y+ + G +P NAL+ +Y K GK++ AE +F + NK + S
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 251 TMIVGYAKFGFLDIARKIFDDLPE--------KYVVPWNAIIGGYVQAKRSKEALALFHE 302
++I + G LD A +F +L E VV W ++I G R ++L F +
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 303 MQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGN 362
MQ + + ++VT LS C++L AL+ G IH + + + + N+++ ALV+MYAKCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 363 IAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSA 422
+++ VF + +++ +++ +II G +HG A A+S F MI G PD I + +LSA
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
Query: 423 CCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVV 482
C H GLV++GR+ F MS F L P+ +HY+C+VDLLGR G L+EA +++++MPM V
Sbjct: 545 CSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVC 604
Query: 483 VWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMME 542
V GAL +CR+H NV I E A +L L+P+ +G Y+LL+N+Y WEE+ VR + +
Sbjct: 605 VLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAK 664
Query: 543 ERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTRH 587
++ ++K G S IEV Y+F E E IY L L H
Sbjct: 665 KKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSH 709
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 173/409 (42%), Gaps = 109/409 (26%)
Query: 42 NSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY------------------- 82
N SWNV I+GF + AV +++ M R +PD T+
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQRE-EFKPDEVTWTSVLSCHSQCGKFEDVLKY 281
Query: 83 ----------------PLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVS 126
+ F VCA L + ++ G+V+K GF+ + NA+IHV+
Sbjct: 282 FHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGK 341
Query: 127 CGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRL------------------- 167
G + A ++F + + + SWNSLI FV +G EA+ L
Sbjct: 342 QGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVT 401
Query: 168 --------------------FRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYIS 207
FR MQ +V + VT+ ++S CA+L LNLGREIH ++
Sbjct: 402 WTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVI 461
Query: 208 ESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARK 267
+ ++ + + NAL++MY KCG L +F+++ +K ++S ++I GY GF
Sbjct: 462 RTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGF------ 515
Query: 268 IFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGA 327
+++AL++F M ++G PD + V LSACS G
Sbjct: 516 -------------------------AEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 328 LDDGIWIHRFIEKENFNLNVVLG--TALVDMYAKCGNIAKALQVFHEMP 374
++ G I + K F L +VD+ + G + +A ++ MP
Sbjct: 551 VEKGREIFYSMSKR-FGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 7/225 (3%)
Query: 18 AFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRP 77
A SE + +++ + NV +W I+G G+ ++++ ++QM +
Sbjct: 379 ALSLFSELEEMNHVCNVKANV-----VTWTSVIKGCNVQGRGDDSLEYFRQM-QFSKVLA 432
Query: 78 DNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVF 137
++ T + +CA L LG EI GHV++ ++ V NA+++++ CG L VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 138 DESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLN 197
+ ++L+SWNS+I G+ GF +A+ +F M PD + ++ ++SAC+ +
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 198 LGREIHWYISES-GLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
GREI + +S+ GL ++D+ + G L+ A EI +M
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 341 bits (875), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 276/449 (61%), Gaps = 1/449 (0%)
Query: 130 LGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSA 189
LG A +F + NL +N LI F P +A + M R+ PD +T ++ A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 190 CAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSC 249
+++E + +G + H I G V + N+L+ MY CG + +A IF M + VVS
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 250 TTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIK 309
T+M+ GY K G ++ AR++FD++P + + W+ +I GY + ++A+ LF M+ G+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 310 PDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQV 369
+ V +S+C+ LGAL+ G + ++ K + +N++LGTALVDM+ +CG+I KA+ V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 370 FHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLV 429
F +PE +SL++++II GLA+HG A A+ YFS+MI +G +P ++TF +LSAC HGGLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 430 DEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFF 489
++G + + M + P+L+HY C+VD+LGR+G L EAE I M + + + GAL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 490 ACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKT 549
AC+++ N + ER L+++ P+ SG YVLL+N+Y + W++ +R MM+E+ V+K
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 550 PGCSSIEVNGLLYEFIV-RDKSHPELEQI 577
PG S IE++G + +F + D+ HPE+ +I
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 196/426 (46%), Gaps = 70/426 (16%)
Query: 4 TGLISHGFAPSRLIAFCAISESKN-----LDYCTKILFNVQNPNSFSWNVAIRGFLETGK 58
T LIS F SRL+A C + N L Y I +QNPN F +N+ IR F +
Sbjct: 38 THLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAE 97
Query: 59 MREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHN 118
+A Y QML++ PDN T+P L K + + +G + +++ GF D+YV N
Sbjct: 98 PSKAFGFYTQMLKSR-IWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVEN 156
Query: 119 AVIHVFVSCGDLGLACNV-------------------------------FDESCVRNLVS 147
+++H++ +CG + A + FDE RNL +
Sbjct: 157 SLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFT 216
Query: 148 WNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREIHWYIS 207
W+ +ING+ ++ +AI LF M+ E V +E M+ ++S+CA L L G + Y+
Sbjct: 217 WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 208 ESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKFGFLDIARK 267
+S +T+ + L AL+DM+ +CG +E A +F+
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG--------------------------- 309
Query: 268 IFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGA 327
LPE + W++II G + +A+ F +M + G P VT LSACS G
Sbjct: 310 ----LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 328 LDDGIWIHRFIEKEN-FNLNVVLGTALVDMYAKCGNIAKALQVFHEMPER-NSLTYTAII 385
++ G+ I+ ++K++ + +VDM + G +A+A +M + N+ A++
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 386 GGLALH 391
G ++
Sbjct: 426 GACKIY 431
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 329/625 (52%), Gaps = 72/625 (11%)
Query: 30 YCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVC 89
Y I +VQ P+ F +NV +RGF ++ ++ + ++ +P++ TY F +
Sbjct: 70 YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA--FAIS 127
Query: 90 ASLGLR--FLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVS 147
A+ G R G I G + G D ++ + + ++ ++ + A VFD ++ +
Sbjct: 128 AASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187
Query: 148 WNSLINGFVRSGFPREAIRLFRDMQLER-VEPDEVTMIGMVSACAQLEDLNLGREIHWYI 206
WN++I+G+ ++ E+I++FRD+ E D T++ ++ A A+L++L LG +IH
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 207 SESG-------LTLTVPLA------------------------NALMDMYVKCGKLESAE 235
+++G LT + L NA++ Y G+ E +
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 236 EIFDSMV-------NKTVVS-----------------------------CTTMIVGYAKF 259
+F ++ + T+VS T + Y+K
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 260 GFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCL 319
++ ARK+FD+ PEK + WNA+I GY Q +++A++LF EMQ + P+ VT L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 320 SACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMPERNSL 379
SAC+QLGAL G W+H + +F ++ + TAL+ MYAKCG+IA+A ++F M ++N +
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 380 TYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRKYFAQM 439
T+ +I G LHG+ +A++ F EM+ G+ P +TFL +L AC H GLV EG + F M
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 440 SSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLHGNVSI 499
+ P +KHY+CMVD+LGR+G L+ A Q I +M + VW L ACR+H + ++
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 500 GERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCSSIEVNG 559
+ KL ELDP + G +VLL+N++ + +A VR+ ++R + K PG + IE+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 560 LLYEFIVRDKSHPELEQIYDCLVQL 584
+ F D+SHP++++IY+ L +L
Sbjct: 668 TPHVFTSGDQSHPQVKEIYEKLEKL 692
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 212/451 (47%), Gaps = 47/451 (10%)
Query: 2 TITGLISHGFAPSRLIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMRE 61
T TG SH + + I+ S+ + + + + P+ ++N I G+ G+
Sbjct: 248 TKTGCYSHDYVLTGFISL--YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 62 AVDLYKQMLRNGGTRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVI 121
++ L+K+++ +G R + T L V L L Y I G+ LK F V A+
Sbjct: 306 SLSLFKELMLSGA-RLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVSTALT 361
Query: 122 HVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEV 181
V+ ++ A +FDES ++L SWN++I+G+ ++G +AI LFR+MQ P+ V
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 182 TMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSM 241
T+ ++SACAQL L+LG+ +H + + ++ ++ AL+ MY KCG + A +FD M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 242 VNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFH 301
K V+ TMI GY G + +EAL +F+
Sbjct: 482 TKKNEVTWNTMISGYGLHG-------------------------------QGQEALNIFY 510
Query: 302 EMQATGIKPDAVTTVHCLSACSQLGALDDGIWI-HRFIEKENFNLNVVLGTALVDMYAKC 360
EM +GI P VT + L ACS G + +G I + I + F +V +VD+ +
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 361 GNIAKALQVFHEMP-ERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGI 419
G++ +ALQ M E S + ++G +H K + SE + L PD + + +
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIH-KDTNLARTVSEKL-FELDPDNVGYHVL 628
Query: 420 LSACCHGGLVDEGRKYFAQMSSIFRLSPKLK 450
LS + + + Q +++ + + K K
Sbjct: 629 LSN------IHSADRNYPQAATVRQTAKKRK 653
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 309/582 (53%), Gaps = 70/582 (12%)
Query: 37 NVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTYPLLFKVCASL-GLR 95
+++P +W IR F + +A+ + +M R G PD+ +P + K C + LR
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 96 FLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLAC---NVFDE------------- 139
F G + G +++LG D D+Y NA+++++ +G NVFDE
Sbjct: 123 F-GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 140 ---SCV-----------------RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPD 179
+C+ +++VS+N++I G+ +SG +A+R+ R+M ++PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 180 EVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFD 239
T+ ++ ++ D+ G+EIH Y+ G+ V + ++L+DMY K ++E +E +F
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 240 SMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALAL 299
+ Y + G + WN+++ GYVQ R EAL L
Sbjct: 302 RL--------------YCRDG-----------------ISWNSLVAGYVQNGRYNEALRL 330
Query: 300 FHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAK 359
F +M +KP AV + AC+ L L G +H ++ + F N+ + +ALVDMY+K
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 360 CGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGI 419
CGNI A ++F M + +++TAII G ALHG +A+S F EM G+ P+++ F+ +
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 420 LSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAA 479
L+AC H GLVDE YF M+ ++ L+ +L+HY+ + DLLGR+G LEEA I M +
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 480 DVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVLLANMYRDSNMWEEAGKVRK 539
VW L +C +H N+ + E+ A K+ +D ++ G YVL+ NMY + W+E K+R
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570
Query: 540 MMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCL 581
M ++G+ K P CS IE+ + F+ D+SHP +++I + L
Sbjct: 571 RMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 168/367 (45%), Gaps = 27/367 (7%)
Query: 23 SESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGTRPDNFTY 82
++S ++ ++ + + SWN + G+++ G+ EA+ L++QM+ +P +
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV-TAKVKPGAVAF 346
Query: 83 PLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCV 142
+ CA L LG ++ G+VL+ GF ++++ +A++ ++ CG++ A +FD V
Sbjct: 347 SSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 143 RNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLEDLNLGREI 202
+ VSW ++I G G EA+ LF +M+ + V+P++V + +++AC+ + L E
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH---VGLVDEA 463
Query: 203 HWYISE----SGLTLTVPLANALMDMYVKCGKLESAEEIFDSM-VNKTVVSCTTMIVGYA 257
Y + GL + A+ D+ + GKLE A M V T +T++ +
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 258 KFGFLDIARKIFDDLPEKYVVPWNAIIGGYV-------QAKRSKEALALFHEMQATGIKP 310
L++A K+ EK + +G YV R KE L M+ G++
Sbjct: 524 VHKNLELAEKV----AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
Query: 311 DAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVF 370
+ + ++ G H ++K N L V+ + K G +A V
Sbjct: 580 KPACS--WIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM-----EQMEKEGYVADTSGVL 632
Query: 371 HEMPERN 377
H++ E +
Sbjct: 633 HDVDEEH 639
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 42/257 (16%)
Query: 269 FDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVTTVHCLSACSQLGAL 328
F L V+ W ++I + +ALA F EM+A+G PD L +C+ + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 329 DDGIWIHRFIEKENFNLNVVLGTALVDMYAKC---GNIAKALQVFHEMPERNS------- 378
G +H FI + + ++ G AL++MYAK G+ VF EMP+R S
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 379 --------------------------LTYTAIIGGLALHGKALDAISYFSEMIGVGLMPD 412
++Y II G A G DA+ EM L PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 413 EITFLGILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHY--SCMVDLLGRSGLLEEAEQ 470
T +L V +G++ + R Y S +VD+ +S +E++E+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGY---VIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 471 LIRSMPMAADVVVWGAL 487
+ + D + W +L
Sbjct: 299 VFSRL-YCRDGISWNSL 314
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 304/572 (53%), Gaps = 38/572 (6%)
Query: 16 LIAFCAISESKNLDYCTKILFNVQNPNSFSWNVAIRGFLETGKMREAVDLYKQMLRNGGT 75
L ++C E + LD + + +S ++N I G+ + G E++ L+ +M R G
Sbjct: 191 LKSYC---EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM-RQSGH 246
Query: 76 RPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACN 135
+P +FT+ + K L LG ++ + GF D V N ++ F S D L
Sbjct: 247 QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILD-FYSKHDRVLETR 305
Query: 136 -VFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEPDEVTMIGMVSACAQLE 194
+FDE + VS+N +I+ + ++ ++ FR+MQ + M+S A L
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 195 DLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIV 254
L +GR++H + + + N+L+DMY KC E AE IF S
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS-------------- 411
Query: 255 GYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATGIKPDAVT 314
LP++ V W A+I GYVQ L LF +M+ + ++ D T
Sbjct: 412 -----------------LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 315 TVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKALQVFHEMP 374
L A + +L G +H FI + NV G+ LVDMYAKCG+I A+QVF EMP
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 375 ERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGGLVDEGRK 434
+RN++++ A+I A +G AI F++MI GL PD ++ LG+L+AC H G V++G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 435 YFAQMSSIFRLSPKLKHYSCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGALFFACRLH 494
YF MS I+ ++PK KHY+CM+DLLGR+G EAE+L+ MP D ++W ++ ACR+H
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 495 GNVSIGERAAMKLLELDP-QDSGIYVLLANMYRDSNMWEEAGKVRKMMEERGVEKTPGCS 553
N S+ ERAA KL ++ +D+ YV ++N+Y + WE+ V+K M ERG++K P S
Sbjct: 635 KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Query: 554 SIEVNGLLYEFIVRDKSHPELEQIYDCLVQLT 585
+EVN ++ F D++HP ++I + +LT
Sbjct: 695 WVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 224/525 (42%), Gaps = 73/525 (13%)
Query: 33 KILFNVQNPNSFSWNVAIRGFLETGKMREAVD---------------------------- 64
K+ + + N+ S N I G ++TG + A D
Sbjct: 69 KVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDE 128
Query: 65 ---LYKQMLRNGG-TRPDNFTYPLLFKVCASLGLRFLGYEIFGHVLKLGFDVDMY--VHN 118
L++QM R+ T PD+ T+ L C + ++ +KLGFD + + V N
Sbjct: 129 AFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSN 188
Query: 119 AVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSGFPREAIRLFRDMQLERVEP 178
++ + L LAC +F+E ++ V++N+LI G+ + G E+I LF M+ +P
Sbjct: 189 VLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQP 248
Query: 179 DEVTMIGMVSACAQLEDLNLGREIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIF 238
+ T G++ A L D LG+++H +G + + N ++D Y K ++ +F
Sbjct: 249 SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLF 308
Query: 239 DSMVNKTVVSCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALA 298
D M PE V +N +I Y QA + + +L
Sbjct: 309 DEM-------------------------------PELDFVSYNVVISSYSQADQYEASLH 337
Query: 299 LFHEMQATGIKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYA 358
F EMQ G LS + L +L G +H + + +G +LVDMYA
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 359 KCGNIAKALQVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLG 418
KC +A +F +P+R ++++TA+I G G + F++M G L D+ TF
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 419 ILSACCHGGLVDEGRKYFAQMSSIFRLSPKLKHY---SCMVDLLGRSGLLEEAEQLIRSM 475
+L A + G+ Q+ + S L++ S +VD+ + G +++A Q+ M
Sbjct: 458 VLKASASFASLLLGK----QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 476 PMAADVVVWGALFFACRLHGNVSIGERAAMKLLELDPQDSGIYVL 520
P + V W AL A +G+ A K++E Q + +L
Sbjct: 514 P-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 200 REIHWYISESGLTLTVPLANALMDMYVKCGKLESAEEIFDSMVNKTVVSCTTMIVGYAKF 259
R + I ++G +N +++ ++ G++ +A +++D M +K VS TMI G+ K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 260 GFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEM--QATGIKPDAVTTVH 317
G + AR +FD +P++ VV W ++G Y + EA LF +M ++ PD VT
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 318 CLSACSQLGALDDGIWIHRFIEKENFNLN--VVLGTALVDMYAKCGNIAKALQVFHEMPE 375
L C+ + +H F K F+ N + + L+ Y + + A +F E+PE
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 376 RNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSA 422
++S+T+ +I G G ++I F +M G P + TF G+L A
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 174/432 (40%), Gaps = 73/432 (16%)
Query: 103 GHVLKLGFDVDMYVHNAVIHVFVSCGDLGLACNVFDESCVRNLVSWNSLINGFVRSG--- 159
++K GFD D N ++ + G + A V+DE +N VS N++I+G V++G
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVS 96
Query: 160 -----------------------FPR-----EAIRLFRDMQLER--VEPDEVTMIGMVSA 189
+ R EA +LFR M PD VT ++
Sbjct: 97 SARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 190 CAQLEDLNLGREIHWYISESGLTLT--VPLANALMDMYVKCGKLESAEEIFDSMVNKTVV 247
C N ++H + + G + ++N L+ Y + +L+ A +F+ + K V
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 248 SCTTMIVGYAKFGFLDIARKIFDDLPEKYVVPWNAIIGGYVQAKRSKEALALFHEMQATG 307
+ T+I GY K G E++ LF +M+ +G
Sbjct: 217 TFNTLITGYEKDGLY-------------------------------TESIHLFLKMRQSG 245
Query: 308 IKPDAVTTVHCLSACSQLGALDDGIWIHRFIEKENFNLNVVLGTALVDMYAKCGNIAKAL 367
+P T L A L G +H F+ + +G ++D Y+K + +
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 368 QVFHEMPERNSLTYTAIIGGLALHGKALDAISYFSEMIGVGLMPDEITFLGILSACCHGG 427
+F EMPE + ++Y +I + + ++ +F EM +G F +LS +
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 428 LVDEGRKYFAQMSSIFRLSPKLKHY-SCMVDLLGRSGLLEEAEQLIRSMPMAADVVVWGA 486
+ GR+ Q ++ + + H + +VD+ + + EEAE + +S+P V W A
Sbjct: 366 SLQMGRQLHCQ--ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTA 422
Query: 487 L---FFACRLHG 495
L + LHG
Sbjct: 423 LISGYVQKGLHG 434
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,135,810
Number of Sequences: 539616
Number of extensions: 9115337
Number of successful extensions: 36666
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 26529
Number of HSP's gapped (non-prelim): 2534
length of query: 588
length of database: 191,569,459
effective HSP length: 123
effective length of query: 465
effective length of database: 125,196,691
effective search space: 58216461315
effective search space used: 58216461315
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)