Query 007820
Match_columns 588
No_of_seqs 298 out of 1751
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 11:19:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fcc_A Glutamate dehydrogenase 100.0 4E-128 1E-132 1035.7 40.1 397 190-587 7-406 (450)
2 3r3j_A Glutamate dehydrogenase 100.0 9E-127 3E-131 1025.4 37.9 399 189-587 12-411 (456)
3 2bma_A Glutamate dehydrogenase 100.0 2E-124 5E-129 1011.8 40.2 399 189-587 25-424 (470)
4 1bgv_A Glutamate dehydrogenase 100.0 8E-119 3E-123 965.2 38.2 396 191-587 2-403 (449)
5 3k92_A NAD-GDH, NAD-specific g 100.0 1E-116 4E-121 942.4 32.3 366 208-587 15-381 (424)
6 3aog_A Glutamate dehydrogenase 100.0 7E-115 3E-119 932.7 33.9 368 207-587 28-396 (440)
7 3mw9_A GDH 1, glutamate dehydr 100.0 2E-114 5E-119 937.7 35.8 372 205-587 4-418 (501)
8 3aoe_E Glutamate dehydrogenase 100.0 4E-114 1E-118 923.4 31.1 367 204-587 8-375 (419)
9 2yfq_A Padgh, NAD-GDH, NAD-spe 100.0 1E-113 4E-118 921.0 28.8 366 209-587 6-378 (421)
10 2tmg_A Protein (glutamate dehy 100.0 4E-111 1E-115 899.6 34.5 368 207-587 2-371 (415)
11 1v9l_A Glutamate dehydrogenase 100.0 8E-112 3E-116 906.0 29.1 368 207-587 3-377 (421)
12 1gtm_A Glutamate dehydrogenase 100.0 1.4E-98 5E-103 804.5 29.6 368 207-587 2-374 (419)
13 1c1d_A L-phenylalanine dehydro 100.0 2.8E-80 9.6E-85 650.5 22.6 298 239-588 8-314 (355)
14 1leh_A Leucine dehydrogenase; 100.0 2E-76 6.8E-81 623.2 21.3 295 239-587 10-311 (364)
15 3ing_A Homoserine dehydrogenas 97.8 3.1E-05 1.1E-09 80.4 8.2 123 415-551 3-140 (325)
16 1vl6_A Malate oxidoreductase; 97.7 0.00023 7.9E-09 75.8 13.6 120 395-532 171-295 (388)
17 2o4c_A Erythronate-4-phosphate 97.5 0.00022 7.4E-09 75.7 9.3 156 349-551 63-229 (380)
18 3d4o_A Dipicolinate synthase s 97.5 0.00074 2.5E-08 68.1 12.6 117 406-551 145-263 (293)
19 2a9f_A Putative malic enzyme ( 97.4 0.00054 1.9E-08 73.1 11.0 126 395-538 167-298 (398)
20 3n58_A Adenosylhomocysteinase; 97.4 0.00063 2.1E-08 73.9 11.4 98 408-534 239-337 (464)
21 2d5c_A AROE, shikimate 5-dehyd 97.3 0.0012 4.1E-08 65.2 11.2 136 404-569 105-244 (263)
22 2rir_A Dipicolinate synthase, 97.2 0.0024 8.2E-08 64.5 11.7 120 408-556 149-272 (300)
23 3gvp_A Adenosylhomocysteinase 97.1 0.0022 7.4E-08 69.3 11.2 110 397-535 200-311 (435)
24 3do5_A HOM, homoserine dehydro 97.0 0.0012 4.1E-08 68.6 8.1 118 417-551 3-138 (327)
25 3h9u_A Adenosylhomocysteinase; 97.0 0.0025 8.7E-08 68.8 10.7 104 408-540 203-309 (436)
26 1gq2_A Malic enzyme; oxidoredu 97.0 0.0027 9.1E-08 70.2 10.6 177 322-533 204-397 (555)
27 2hk9_A Shikimate dehydrogenase 96.9 0.0031 1.1E-07 63.0 10.2 143 394-570 111-258 (275)
28 3oet_A Erythronate-4-phosphate 96.9 0.0029 9.8E-08 67.3 9.7 123 394-549 97-230 (381)
29 3pwz_A Shikimate dehydrogenase 96.9 0.012 4.1E-07 59.4 13.8 130 396-552 103-237 (272)
30 4a26_A Putative C-1-tetrahydro 96.9 0.0098 3.3E-07 61.4 13.3 53 391-448 144-197 (300)
31 1mx3_A CTBP1, C-terminal bindi 96.8 0.0024 8E-08 66.8 8.6 108 412-549 164-279 (347)
32 1o0s_A NAD-ME, NAD-dependent m 96.8 0.0032 1.1E-07 70.1 10.0 176 322-532 242-434 (605)
33 3o8q_A Shikimate 5-dehydrogena 96.8 0.012 3.9E-07 59.8 13.4 129 396-552 110-243 (281)
34 2pi1_A D-lactate dehydrogenase 96.8 0.0014 4.9E-08 68.1 6.5 108 411-549 136-250 (334)
35 1nyt_A Shikimate 5-dehydrogena 96.8 0.017 5.9E-07 57.5 14.1 132 395-553 102-237 (271)
36 1pj3_A NAD-dependent malic enz 96.8 0.0035 1.2E-07 69.4 9.7 179 322-533 206-402 (564)
37 1xdw_A NAD+-dependent (R)-2-hy 96.8 0.0032 1.1E-07 65.1 8.7 107 411-549 141-254 (331)
38 1b0a_A Protein (fold bifunctio 96.7 0.015 5.1E-07 59.7 13.3 52 392-448 139-191 (288)
39 2j6i_A Formate dehydrogenase; 96.7 0.0039 1.3E-07 65.4 9.0 110 411-549 159-277 (364)
40 3jtm_A Formate dehydrogenase, 96.7 0.0085 2.9E-07 62.8 11.4 111 411-549 159-276 (351)
41 3tum_A Shikimate dehydrogenase 96.7 0.037 1.2E-06 55.9 15.6 131 396-552 109-246 (269)
42 4e5n_A Thermostable phosphite 96.7 0.003 1E-07 65.5 7.8 110 411-549 140-256 (330)
43 2ekl_A D-3-phosphoglycerate de 96.6 0.005 1.7E-07 63.2 9.2 108 411-548 137-251 (313)
44 3fbt_A Chorismate mutase and s 96.6 0.013 4.4E-07 59.7 11.9 125 396-552 106-235 (282)
45 1wwk_A Phosphoglycerate dehydr 96.6 0.0042 1.4E-07 63.6 8.4 108 412-549 138-252 (307)
46 3c8m_A Homoserine dehydrogenas 96.6 0.0026 9E-08 65.8 6.9 124 416-551 6-144 (331)
47 3jyo_A Quinate/shikimate dehyd 96.6 0.018 6.2E-07 58.4 12.8 131 396-552 111-250 (283)
48 4g2n_A D-isomer specific 2-hyd 96.6 0.0075 2.6E-07 63.1 10.2 108 411-549 168-283 (345)
49 1dxy_A D-2-hydroxyisocaproate 96.5 0.0074 2.5E-07 62.5 9.7 107 411-549 140-253 (333)
50 1p77_A Shikimate 5-dehydrogena 96.5 0.024 8.4E-07 56.5 13.2 130 396-553 103-238 (272)
51 2d0i_A Dehydrogenase; structur 96.5 0.0036 1.2E-07 64.7 7.1 107 412-549 142-255 (333)
52 2w2k_A D-mandelate dehydrogena 96.5 0.0054 1.8E-07 63.8 8.4 117 410-555 157-283 (348)
53 2ho3_A Oxidoreductase, GFO/IDH 96.5 0.0067 2.3E-07 61.3 9.0 110 417-551 2-117 (325)
54 2yq5_A D-isomer specific 2-hyd 96.4 0.0072 2.5E-07 63.2 8.8 107 411-549 143-256 (343)
55 3g0o_A 3-hydroxyisobutyrate de 96.4 0.016 5.3E-07 58.3 11.0 109 416-552 7-125 (303)
56 2gcg_A Glyoxylate reductase/hy 96.4 0.0047 1.6E-07 63.6 7.2 109 412-549 151-266 (330)
57 1u8f_O GAPDH, glyceraldehyde-3 96.4 0.013 4.5E-07 60.8 10.6 105 417-530 4-122 (335)
58 2egg_A AROE, shikimate 5-dehyd 96.4 0.018 6.3E-07 58.4 11.3 133 395-554 123-263 (297)
59 2g76_A 3-PGDH, D-3-phosphoglyc 96.4 0.0057 1.9E-07 63.6 7.7 109 411-549 160-275 (335)
60 3tnl_A Shikimate dehydrogenase 96.4 0.044 1.5E-06 56.6 14.2 135 396-552 138-284 (315)
61 4e21_A 6-phosphogluconate dehy 96.4 0.0091 3.1E-07 62.5 9.1 112 414-553 20-139 (358)
62 3gg9_A D-3-phosphoglycerate de 96.3 0.0076 2.6E-07 63.1 8.4 110 411-549 155-271 (352)
63 3l07_A Bifunctional protein fo 96.3 0.008 2.7E-07 61.6 8.0 52 392-448 141-193 (285)
64 3h9e_O Glyceraldehyde-3-phosph 96.3 0.015 5.2E-07 61.0 10.3 105 417-530 8-126 (346)
65 3uuw_A Putative oxidoreductase 96.3 0.0035 1.2E-07 62.9 5.3 114 415-553 5-123 (308)
66 4had_A Probable oxidoreductase 96.3 0.0094 3.2E-07 60.6 8.6 113 417-553 24-143 (350)
67 1tlt_A Putative oxidoreductase 96.3 0.005 1.7E-07 62.1 6.4 112 415-552 4-121 (319)
68 3hg7_A D-isomer specific 2-hyd 96.3 0.012 4.1E-07 61.1 9.3 35 411-445 135-169 (324)
69 1obf_O Glyceraldehyde 3-phosph 96.3 0.0083 2.8E-07 62.8 8.1 103 417-529 2-122 (335)
70 3p2o_A Bifunctional protein fo 96.3 0.0087 3E-07 61.3 8.1 52 392-448 140-192 (285)
71 3evt_A Phosphoglycerate dehydr 96.2 0.012 4E-07 61.0 9.1 109 411-549 132-247 (324)
72 3gvx_A Glycerate dehydrogenase 96.2 0.011 3.7E-07 60.4 8.5 105 412-549 118-229 (290)
73 3e5r_O PP38, glyceraldehyde-3- 96.2 0.012 4E-07 61.4 8.8 106 417-531 4-126 (337)
74 3pp8_A Glyoxylate/hydroxypyruv 96.2 0.024 8E-07 58.5 10.8 108 412-549 135-249 (315)
75 2cuk_A Glycerate dehydrogenase 96.2 0.013 4.6E-07 60.0 9.0 37 411-448 139-175 (311)
76 3nv9_A Malic enzyme; rossmann 96.2 0.042 1.4E-06 59.9 13.0 179 329-538 150-336 (487)
77 2ejw_A HDH, homoserine dehydro 96.2 0.0064 2.2E-07 63.3 6.6 83 417-528 4-96 (332)
78 2glx_A 1,5-anhydro-D-fructose 96.1 0.011 3.8E-07 59.6 8.2 109 417-552 1-118 (332)
79 3euw_A MYO-inositol dehydrogen 96.1 0.0072 2.4E-07 61.6 6.8 111 417-553 5-122 (344)
80 4hkt_A Inositol 2-dehydrogenas 96.1 0.011 3.8E-07 59.9 8.1 112 417-553 4-120 (331)
81 3t4e_A Quinate/shikimate dehyd 96.1 0.055 1.9E-06 55.8 13.4 135 396-552 132-278 (312)
82 3ezy_A Dehydrogenase; structur 96.1 0.0064 2.2E-07 62.0 6.3 113 417-553 3-121 (344)
83 3d64_A Adenosylhomocysteinase; 96.1 0.013 4.5E-07 64.2 9.0 108 409-545 270-380 (494)
84 3q2i_A Dehydrogenase; rossmann 96.1 0.011 3.8E-07 60.5 8.0 113 415-553 12-132 (354)
85 3c85_A Putative glutathione-re 96.1 0.031 1.1E-06 51.5 10.3 112 412-554 35-161 (183)
86 2g1u_A Hypothetical protein TM 96.1 0.036 1.2E-06 50.0 10.5 112 410-549 13-133 (155)
87 1qp8_A Formate dehydrogenase; 96.1 0.017 6E-07 59.0 9.3 35 413-448 121-155 (303)
88 3b1j_A Glyceraldehyde 3-phosph 96.1 0.021 7E-07 59.7 10.0 99 417-525 3-117 (339)
89 3ba1_A HPPR, hydroxyphenylpyru 96.1 0.022 7.6E-07 59.1 10.1 111 411-555 159-278 (333)
90 2h78_A Hibadh, 3-hydroxyisobut 96.0 0.019 6.6E-07 57.2 9.3 117 417-561 4-127 (302)
91 2i99_A MU-crystallin homolog; 96.0 0.019 6.5E-07 58.5 9.4 114 413-553 132-249 (312)
92 2d2i_A Glyceraldehyde 3-phosph 96.0 0.021 7.3E-07 60.6 10.0 99 417-525 3-117 (380)
93 4dll_A 2-hydroxy-3-oxopropiona 96.0 0.018 6E-07 58.6 9.1 113 413-552 28-147 (320)
94 3llv_A Exopolyphosphatase-rela 96.0 0.026 8.8E-07 49.7 9.0 108 415-554 5-125 (141)
95 3rc1_A Sugar 3-ketoreductase; 96.0 0.0093 3.2E-07 61.4 7.0 116 414-554 25-147 (350)
96 2p2s_A Putative oxidoreductase 96.0 0.011 3.7E-07 60.0 7.5 109 416-551 4-121 (336)
97 3cps_A Glyceraldehyde 3-phosph 96.0 0.018 6.2E-07 60.6 9.3 105 417-530 18-137 (354)
98 2nac_A NAD-dependent formate d 96.0 0.022 7.5E-07 60.6 10.0 110 411-549 186-303 (393)
99 3m2t_A Probable dehydrogenase; 96.0 0.0084 2.9E-07 61.9 6.6 115 414-552 3-124 (359)
100 1xea_A Oxidoreductase, GFO/IDH 96.0 0.015 5.3E-07 58.7 8.4 111 417-552 3-119 (323)
101 1ygy_A PGDH, D-3-phosphoglycer 96.0 0.025 8.6E-07 62.0 10.7 109 411-549 137-252 (529)
102 3u3x_A Oxidoreductase; structu 96.0 0.0097 3.3E-07 61.6 7.0 112 416-551 26-143 (361)
103 3fwz_A Inner membrane protein 96.0 0.057 1.9E-06 48.0 11.2 107 417-554 8-127 (140)
104 4a5o_A Bifunctional protein fo 96.0 0.014 4.8E-07 59.8 8.0 52 392-448 141-193 (286)
105 2dbq_A Glyoxylate reductase; D 96.0 0.015 5.3E-07 59.9 8.4 109 411-549 145-260 (334)
106 4hy3_A Phosphoglycerate oxidor 96.0 0.013 4.5E-07 61.8 8.0 114 411-554 171-291 (365)
107 3l6d_A Putative oxidoreductase 96.0 0.018 6.1E-07 58.3 8.7 114 412-553 5-125 (306)
108 3db2_A Putative NADPH-dependen 96.0 0.012 3.9E-07 60.4 7.4 113 416-553 5-123 (354)
109 1gdh_A D-glycerate dehydrogena 95.9 0.016 5.4E-07 59.7 8.3 110 411-549 141-258 (320)
110 1j4a_A D-LDH, D-lactate dehydr 95.9 0.0099 3.4E-07 61.5 6.7 107 411-549 141-255 (333)
111 1lss_A TRK system potassium up 95.9 0.06 2E-06 46.4 10.8 32 416-448 4-35 (140)
112 2x5j_O E4PDH, D-erythrose-4-ph 95.9 0.028 9.6E-07 58.6 10.1 103 417-529 3-123 (339)
113 1v8b_A Adenosylhomocysteinase; 95.9 0.026 9E-07 61.6 10.3 102 410-540 251-355 (479)
114 3fhl_A Putative oxidoreductase 95.9 0.013 4.6E-07 60.3 7.6 112 415-553 4-122 (362)
115 2ep7_A GAPDH, glyceraldehyde-3 95.9 0.015 5.2E-07 61.0 8.0 104 417-530 3-121 (342)
116 2dvm_A Malic enzyme, 439AA lon 95.9 0.014 4.9E-07 63.0 8.0 135 401-551 171-315 (439)
117 3kux_A Putative oxidoreductase 95.9 0.018 6E-07 59.1 8.3 111 416-553 7-124 (352)
118 1rm4_O Glyceraldehyde 3-phosph 95.9 0.033 1.1E-06 58.2 10.4 106 417-532 2-124 (337)
119 4fb5_A Probable oxidoreductase 95.9 0.025 8.7E-07 57.5 9.4 116 413-552 22-150 (393)
120 3e82_A Putative oxidoreductase 95.9 0.017 5.7E-07 59.8 8.1 112 416-554 7-125 (364)
121 3don_A Shikimate dehydrogenase 95.9 0.011 3.8E-07 60.0 6.6 126 395-552 100-231 (277)
122 3pef_A 6-phosphogluconate dehy 95.9 0.012 4.3E-07 58.4 6.9 109 417-552 2-118 (287)
123 3d1l_A Putative NADP oxidoredu 95.8 0.027 9.4E-07 55.0 9.1 98 412-535 6-106 (266)
124 3oa2_A WBPB; oxidoreductase, s 95.8 0.018 6.2E-07 58.7 8.0 110 417-551 4-128 (318)
125 3e18_A Oxidoreductase; dehydro 95.8 0.011 3.8E-07 61.0 6.6 111 415-551 4-120 (359)
126 3ce6_A Adenosylhomocysteinase; 95.8 0.036 1.2E-06 60.7 10.8 92 411-530 269-361 (494)
127 1a4i_A Methylenetetrahydrofola 95.8 0.015 5.2E-07 60.0 7.4 52 392-448 145-197 (301)
128 4gbj_A 6-phosphogluconate dehy 95.8 0.034 1.1E-06 56.4 9.9 108 417-552 6-120 (297)
129 3ond_A Adenosylhomocysteinase; 95.8 0.064 2.2E-06 58.7 12.6 40 408-448 257-296 (488)
130 2dc1_A L-aspartate dehydrogena 95.8 0.019 6.5E-07 55.7 7.7 101 417-550 1-105 (236)
131 3gdo_A Uncharacterized oxidore 95.8 0.014 4.7E-07 60.2 6.9 112 415-553 4-122 (358)
132 4dgs_A Dehydrogenase; structur 95.7 0.02 6.8E-07 59.8 8.1 106 410-549 165-278 (340)
133 1ff9_A Saccharopine reductase; 95.7 0.028 9.5E-07 60.5 9.5 116 415-556 2-125 (450)
134 1dih_A Dihydrodipicolinate red 95.7 0.019 6.5E-07 57.9 7.7 119 415-554 4-129 (273)
135 3o9z_A Lipopolysaccaride biosy 95.7 0.022 7.6E-07 57.9 8.2 110 417-551 4-127 (312)
136 1ebf_A Homoserine dehydrogenas 95.7 0.016 5.6E-07 60.7 7.4 122 417-551 5-140 (358)
137 3qy9_A DHPR, dihydrodipicolina 95.7 0.02 6.7E-07 57.1 7.6 102 417-555 4-110 (243)
138 3k5p_A D-3-phosphoglycerate de 95.7 0.043 1.5E-06 58.9 10.7 112 411-554 151-270 (416)
139 3doj_A AT3G25530, dehydrogenas 95.7 0.023 8E-07 57.4 8.2 114 413-552 18-138 (310)
140 2d59_A Hypothetical protein PH 95.7 0.078 2.7E-06 48.2 11.0 103 416-551 22-128 (144)
141 3hja_A GAPDH, glyceraldehyde-3 95.7 0.019 6.5E-07 60.5 7.7 105 416-530 21-144 (356)
142 3cea_A MYO-inositol 2-dehydrog 95.7 0.031 1.1E-06 56.6 9.1 113 415-552 7-128 (346)
143 3evn_A Oxidoreductase, GFO/IDH 95.7 0.014 4.9E-07 59.2 6.5 114 415-552 4-123 (329)
144 2yyy_A Glyceraldehyde-3-phosph 95.6 0.015 5E-07 60.8 6.7 103 417-531 3-114 (343)
145 2g82_O GAPDH, glyceraldehyde-3 95.6 0.029 1E-06 58.4 8.7 99 417-525 1-112 (331)
146 1sc6_A PGDH, D-3-phosphoglycer 95.6 0.053 1.8E-06 57.8 10.8 105 411-548 140-252 (404)
147 3doc_A Glyceraldehyde 3-phosph 95.5 0.035 1.2E-06 58.1 9.0 102 417-528 3-120 (335)
148 1nvt_A Shikimate 5'-dehydrogen 95.5 0.075 2.6E-06 53.2 11.2 134 394-553 110-252 (287)
149 1y81_A Conserved hypothetical 95.5 0.097 3.3E-06 47.4 10.7 115 414-564 12-130 (138)
150 4gqa_A NAD binding oxidoreduct 95.5 0.031 1.1E-06 58.3 8.5 112 417-552 27-152 (412)
151 3e9m_A Oxidoreductase, GFO/IDH 95.5 0.046 1.6E-06 55.5 9.5 116 415-554 4-125 (330)
152 3ngx_A Bifunctional protein fo 95.5 0.028 9.4E-07 57.4 7.7 51 391-448 131-182 (276)
153 3phh_A Shikimate dehydrogenase 95.5 0.095 3.2E-06 53.0 11.7 120 395-553 105-230 (269)
154 3obb_A Probable 3-hydroxyisobu 95.4 0.038 1.3E-06 56.3 8.8 109 417-551 4-119 (300)
155 1gad_O D-glyceraldehyde-3-phos 95.4 0.048 1.6E-06 56.7 9.5 105 417-531 2-120 (330)
156 1ydw_A AX110P-like protein; st 95.4 0.022 7.4E-07 58.5 6.7 113 417-551 7-126 (362)
157 3pdu_A 3-hydroxyisobutyrate de 95.4 0.018 6.2E-07 57.2 6.0 109 417-552 2-118 (287)
158 3pym_A GAPDH 3, glyceraldehyde 95.3 0.071 2.4E-06 55.7 10.5 103 417-528 2-118 (332)
159 3ohs_X Trans-1,2-dihydrobenzen 95.3 0.031 1.1E-06 56.7 7.6 109 417-552 3-122 (334)
160 3ic5_A Putative saccharopine d 95.3 0.089 3E-06 43.9 9.2 34 414-448 3-37 (118)
161 1edz_A 5,10-methylenetetrahydr 95.3 0.032 1.1E-06 58.0 7.7 59 390-449 146-210 (320)
162 4gwg_A 6-phosphogluconate dehy 95.3 0.034 1.2E-06 60.7 8.1 118 415-553 3-127 (484)
163 3lvf_P GAPDH 1, glyceraldehyde 95.2 0.054 1.9E-06 56.7 9.2 103 417-529 5-122 (338)
164 2c2x_A Methylenetetrahydrofola 95.2 0.027 9.2E-07 57.6 6.7 52 392-448 138-192 (281)
165 1hdg_O Holo-D-glyceraldehyde-3 95.2 0.08 2.7E-06 55.1 10.4 103 417-529 1-120 (332)
166 2b4r_O Glyceraldehyde-3-phosph 95.2 0.055 1.9E-06 56.8 9.2 108 413-529 8-130 (345)
167 1npy_A Hypothetical shikimate 95.2 0.3 1E-05 49.1 14.2 128 394-554 102-236 (271)
168 1omo_A Alanine dehydrogenase; 95.2 0.077 2.6E-06 54.4 10.1 112 414-551 123-238 (322)
169 2zyd_A 6-phosphogluconate dehy 95.2 0.044 1.5E-06 59.4 8.7 118 413-552 12-136 (480)
170 3pid_A UDP-glucose 6-dehydroge 95.2 0.052 1.8E-06 58.4 9.2 135 409-560 29-183 (432)
171 3bio_A Oxidoreductase, GFO/IDH 95.1 0.018 6.2E-07 58.4 5.1 108 415-551 8-121 (304)
172 2duw_A Putative COA-binding pr 95.1 0.17 5.7E-06 46.1 11.0 114 416-564 13-131 (145)
173 4h3v_A Oxidoreductase domain p 95.1 0.061 2.1E-06 54.6 8.9 116 414-553 4-135 (390)
174 3qha_A Putative oxidoreductase 95.1 0.027 9.1E-07 56.6 6.1 108 417-552 16-128 (296)
175 4dib_A GAPDH, glyceraldehyde 3 95.1 0.045 1.5E-06 57.5 8.0 102 417-528 5-120 (345)
176 3c1a_A Putative oxidoreductase 95.0 0.021 7.2E-07 57.5 5.3 108 417-552 11-125 (315)
177 4f3y_A DHPR, dihydrodipicolina 95.0 0.028 9.7E-07 56.9 6.2 118 416-555 7-131 (272)
178 3p2y_A Alanine dehydrogenase/p 95.0 0.082 2.8E-06 56.2 9.9 35 413-448 181-215 (381)
179 3mtj_A Homoserine dehydrogenas 95.0 0.059 2E-06 58.3 8.9 110 415-551 9-133 (444)
180 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.033 1.1E-06 49.6 5.8 32 416-448 21-52 (144)
181 3cmc_O GAPDH, glyceraldehyde-3 94.9 0.055 1.9E-06 56.3 8.3 104 417-530 2-120 (334)
182 2z2v_A Hypothetical protein PH 94.9 0.12 4E-06 54.1 10.6 117 412-556 12-134 (365)
183 2czc_A Glyceraldehyde-3-phosph 94.9 0.016 5.6E-07 59.7 4.1 102 417-532 3-112 (334)
184 1zh8_A Oxidoreductase; TM0312, 94.8 0.046 1.6E-06 55.8 7.3 113 415-551 17-137 (340)
185 2ixa_A Alpha-N-acetylgalactosa 94.8 0.081 2.8E-06 56.2 9.5 115 415-551 19-146 (444)
186 3i23_A Oxidoreductase, GFO/IDH 94.8 0.028 9.7E-07 57.5 5.8 113 417-553 3-122 (349)
187 3f4l_A Putative oxidoreductase 94.8 0.024 8.4E-07 57.8 5.2 108 417-552 3-121 (345)
188 3mz0_A Inositol 2-dehydrogenas 94.8 0.066 2.3E-06 54.5 8.3 110 417-550 3-120 (344)
189 3b1f_A Putative prephenate deh 94.8 0.13 4.5E-06 50.7 10.2 112 416-553 6-125 (290)
190 3kb6_A D-lactate dehydrogenase 94.7 0.056 1.9E-06 56.1 7.7 108 411-549 136-250 (334)
191 1nvm_B Acetaldehyde dehydrogen 94.7 0.031 1E-06 57.5 5.5 92 416-531 4-105 (312)
192 1x7d_A Ornithine cyclodeaminas 94.7 0.077 2.6E-06 55.3 8.7 113 414-551 127-247 (350)
193 1h6d_A Precursor form of gluco 94.7 0.062 2.1E-06 57.1 8.1 115 415-552 82-206 (433)
194 3ec7_A Putative dehydrogenase; 94.7 0.056 1.9E-06 55.7 7.5 114 413-550 20-141 (357)
195 1f06_A MESO-diaminopimelate D- 94.7 0.046 1.6E-06 55.8 6.8 94 416-539 3-98 (320)
196 4dio_A NAD(P) transhydrogenase 94.7 0.14 4.7E-06 54.8 10.7 35 413-448 187-221 (405)
197 2axq_A Saccharopine dehydrogen 94.7 0.033 1.1E-06 60.3 6.0 124 410-557 17-146 (467)
198 3moi_A Probable dehydrogenase; 94.7 0.055 1.9E-06 56.3 7.5 111 417-552 3-120 (387)
199 3cky_A 2-hydroxymethyl glutara 94.6 0.079 2.7E-06 52.4 8.2 108 417-552 5-121 (301)
200 4ew6_A D-galactose-1-dehydroge 94.6 0.044 1.5E-06 56.0 6.3 86 413-530 22-112 (330)
201 1jw9_B Molybdopterin biosynthe 94.6 0.028 9.5E-07 55.6 4.7 36 414-449 29-64 (249)
202 3qsg_A NAD-binding phosphogluc 94.5 0.074 2.5E-06 53.9 7.8 114 416-553 24-143 (312)
203 1p9l_A Dihydrodipicolinate red 94.5 0.14 4.9E-06 50.9 9.7 85 417-543 1-87 (245)
204 3dfz_A SIRC, precorrin-2 dehyd 94.4 0.091 3.1E-06 51.8 8.0 35 412-446 27-61 (223)
205 3v1y_O PP38, glyceraldehyde-3- 94.4 0.08 2.7E-06 55.4 8.0 103 417-528 4-122 (337)
206 1iuk_A Hypothetical protein TT 94.4 0.12 4.2E-06 46.8 8.3 113 416-564 13-131 (140)
207 3u62_A Shikimate dehydrogenase 94.3 0.073 2.5E-06 53.0 7.2 120 396-555 95-223 (253)
208 3ijp_A DHPR, dihydrodipicolina 94.3 0.072 2.5E-06 54.5 7.2 118 417-555 22-146 (288)
209 1b7g_O Protein (glyceraldehyde 94.3 0.06 2.1E-06 55.9 6.7 100 417-532 2-110 (340)
210 3upl_A Oxidoreductase; rossman 94.3 0.039 1.3E-06 59.8 5.4 128 415-554 22-165 (446)
211 1cf2_P Protein (glyceraldehyde 94.3 0.03 1E-06 58.1 4.4 103 417-532 2-111 (337)
212 1xyg_A Putative N-acetyl-gamma 94.2 0.14 4.6E-06 53.7 9.3 99 415-533 15-115 (359)
213 4ezb_A Uncharacterized conserv 94.2 0.15 5.1E-06 51.9 9.3 114 417-553 25-145 (317)
214 3abi_A Putative uncharacterize 94.1 0.22 7.4E-06 51.4 10.6 115 413-554 11-132 (365)
215 2nu8_A Succinyl-COA ligase [AD 94.1 0.17 5.9E-06 51.2 9.5 110 416-554 7-123 (288)
216 1yqg_A Pyrroline-5-carboxylate 94.1 0.2 6.8E-06 48.5 9.7 101 417-547 1-103 (263)
217 2cvz_A Dehydrogenase, 3-hydrox 94.1 0.14 4.8E-06 50.1 8.7 108 417-553 2-114 (289)
218 1oi7_A Succinyl-COA synthetase 94.1 0.12 4.1E-06 52.4 8.4 117 416-564 7-129 (288)
219 1j5p_A Aspartate dehydrogenase 94.1 0.11 3.7E-06 52.4 7.8 79 416-530 12-91 (253)
220 4huj_A Uncharacterized protein 94.0 0.068 2.3E-06 51.3 6.0 93 417-534 24-116 (220)
221 2ozp_A N-acetyl-gamma-glutamyl 93.9 0.19 6.6E-06 52.2 9.7 96 417-533 5-102 (345)
222 2iz1_A 6-phosphogluconate dehy 93.8 0.11 3.8E-06 56.0 7.7 114 417-552 6-126 (474)
223 1vpd_A Tartronate semialdehyde 93.7 0.16 5.5E-06 50.2 8.2 108 417-552 6-122 (299)
224 1bg6_A N-(1-D-carboxylethyl)-L 93.7 0.29 9.9E-06 49.3 10.2 114 417-547 5-126 (359)
225 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.6 0.21 7.2E-06 54.0 9.6 118 417-552 2-126 (478)
226 1lu9_A Methylene tetrahydromet 93.5 0.13 4.4E-06 51.3 7.1 50 395-448 101-151 (287)
227 3l4b_C TRKA K+ channel protien 93.4 0.45 1.5E-05 45.0 10.5 31 417-448 1-31 (218)
228 2p4q_A 6-phosphogluconate dehy 93.4 0.15 5.3E-06 55.5 8.1 116 416-552 10-132 (497)
229 1kyq_A Met8P, siroheme biosynt 93.3 0.064 2.2E-06 54.5 4.7 35 412-446 9-43 (274)
230 1lc0_A Biliverdin reductase A; 93.3 0.072 2.5E-06 53.5 5.0 104 415-551 6-120 (294)
231 2ahr_A Putative pyrroline carb 93.1 0.17 5.7E-06 49.2 7.2 102 417-548 4-106 (259)
232 4ina_A Saccharopine dehydrogen 93.1 0.28 9.6E-06 51.7 9.5 120 417-556 2-142 (405)
233 2pgd_A 6-phosphogluconate dehy 93.1 0.19 6.4E-06 54.3 8.2 115 417-552 3-124 (482)
234 3l9w_A Glutathione-regulated p 93.0 0.26 9E-06 52.4 9.1 107 416-549 4-117 (413)
235 3ggo_A Prephenate dehydrogenas 92.9 0.96 3.3E-05 46.0 12.7 35 413-448 30-66 (314)
236 4b4u_A Bifunctional protein fo 92.9 0.41 1.4E-05 49.5 9.9 52 392-448 159-211 (303)
237 2nvw_A Galactose/lactose metab 92.9 0.19 6.4E-06 54.4 7.7 111 416-551 39-170 (479)
238 3h8v_A Ubiquitin-like modifier 92.8 0.23 7.9E-06 50.8 7.9 51 398-448 13-68 (292)
239 3btv_A Galactose/lactose metab 92.7 0.07 2.4E-06 56.7 4.2 114 415-553 19-152 (438)
240 2hmt_A YUAA protein; RCK, KTN, 92.7 0.083 2.9E-06 45.6 3.9 34 414-448 4-37 (144)
241 1l7d_A Nicotinamide nucleotide 92.7 0.16 5.5E-06 53.1 6.7 35 413-448 169-203 (384)
242 1zud_1 Adenylyltransferase THI 92.7 0.12 4.2E-06 51.0 5.6 36 414-449 26-61 (251)
243 3dty_A Oxidoreductase, GFO/IDH 92.7 0.16 5.6E-06 52.9 6.8 117 414-552 10-141 (398)
244 2gf2_A Hibadh, 3-hydroxyisobut 92.4 0.25 8.6E-06 48.7 7.5 31 417-448 1-31 (296)
245 1dlj_A UDP-glucose dehydrogena 92.4 0.2 6.9E-06 52.7 7.2 128 417-560 1-147 (402)
246 3v5n_A Oxidoreductase; structu 92.4 0.27 9.3E-06 51.7 8.1 118 414-553 35-167 (417)
247 3two_A Mannitol dehydrogenase; 92.3 0.68 2.3E-05 47.0 10.7 112 414-552 175-290 (348)
248 1id1_A Putative potassium chan 92.2 0.14 4.9E-06 45.7 4.9 108 415-549 2-120 (153)
249 3ids_C GAPDH, glyceraldehyde-3 92.1 0.38 1.3E-05 50.8 8.6 103 417-528 3-133 (359)
250 3uog_A Alcohol dehydrogenase; 92.0 0.68 2.3E-05 47.4 10.3 33 414-446 188-220 (363)
251 2uyy_A N-PAC protein; long-cha 91.9 0.29 1E-05 48.9 7.4 108 417-552 31-147 (316)
252 4e12_A Diketoreductase; oxidor 91.9 0.23 7.8E-06 49.4 6.4 31 417-448 5-35 (283)
253 1ys4_A Aspartate-semialdehyde 91.7 0.41 1.4E-05 49.6 8.4 105 417-532 9-116 (354)
254 3c24_A Putative oxidoreductase 91.5 0.68 2.3E-05 45.7 9.4 90 417-534 12-104 (286)
255 3gg2_A Sugar dehydrogenase, UD 91.4 0.66 2.2E-05 49.8 9.8 31 417-448 3-33 (450)
256 1yb4_A Tartronic semialdehyde 91.4 0.19 6.6E-06 49.4 5.3 107 417-551 4-118 (295)
257 3tri_A Pyrroline-5-carboxylate 91.4 0.6 2.1E-05 46.5 8.9 33 415-448 2-37 (280)
258 3dtt_A NADP oxidoreductase; st 91.3 0.2 6.7E-06 48.8 5.1 38 410-448 13-50 (245)
259 2f1k_A Prephenate dehydrogenas 91.3 1.4 4.8E-05 43.0 11.3 91 417-534 1-94 (279)
260 3gt0_A Pyrroline-5-carboxylate 91.2 0.43 1.5E-05 46.2 7.5 31 417-448 3-37 (247)
261 3e8x_A Putative NAD-dependent 91.1 0.22 7.7E-06 47.1 5.2 35 412-446 17-52 (236)
262 3keo_A Redox-sensing transcrip 91.1 0.081 2.8E-06 51.9 2.1 109 321-448 6-118 (212)
263 1x13_A NAD(P) transhydrogenase 90.9 0.35 1.2E-05 51.2 6.9 35 413-448 169-203 (401)
264 3ip1_A Alcohol dehydrogenase, 90.8 1.7 5.8E-05 45.2 12.0 33 413-445 211-244 (404)
265 4eye_A Probable oxidoreductase 90.8 0.72 2.5E-05 46.8 9.0 35 413-447 157-192 (342)
266 2yv2_A Succinyl-COA synthetase 90.6 0.9 3.1E-05 46.2 9.4 116 416-564 13-136 (297)
267 2vhw_A Alanine dehydrogenase; 90.4 0.27 9.2E-06 51.4 5.5 35 413-448 165-199 (377)
268 2eez_A Alanine dehydrogenase; 90.3 0.43 1.5E-05 49.5 6.9 35 413-448 163-197 (369)
269 3h5n_A MCCB protein; ubiquitin 90.2 0.59 2E-05 48.6 7.8 35 414-448 116-150 (353)
270 4gmf_A Yersiniabactin biosynth 90.0 0.83 2.8E-05 47.9 8.8 106 416-551 7-123 (372)
271 1mv8_A GMD, GDP-mannose 6-dehy 89.9 0.85 2.9E-05 48.3 8.9 31 417-448 1-31 (436)
272 2yv1_A Succinyl-COA ligase [AD 89.9 0.78 2.7E-05 46.6 8.3 115 417-564 14-135 (294)
273 2ew2_A 2-dehydropantoate 2-red 89.9 1.6 5.6E-05 42.7 10.4 115 417-546 4-124 (316)
274 2rcy_A Pyrroline carboxylate r 89.8 0.58 2E-05 45.2 7.0 33 415-448 3-39 (262)
275 2izz_A Pyrroline-5-carboxylate 89.7 1.2 4.2E-05 45.0 9.6 106 415-545 21-132 (322)
276 1pjq_A CYSG, siroheme synthase 89.5 0.31 1.1E-05 52.3 5.2 36 412-447 8-43 (457)
277 2dt5_A AT-rich DNA-binding pro 89.4 0.13 4.4E-06 50.2 2.0 107 322-448 3-113 (211)
278 2aef_A Calcium-gated potassium 89.2 0.51 1.8E-05 45.0 6.0 105 416-553 9-126 (234)
279 3m6i_A L-arabinitol 4-dehydrog 89.1 0.49 1.7E-05 48.2 6.1 32 414-445 178-210 (363)
280 1yqd_A Sinapyl alcohol dehydro 89.1 0.87 3E-05 46.7 8.0 42 406-447 178-219 (366)
281 1z82_A Glycerol-3-phosphate de 89.1 1.7 5.7E-05 44.0 10.0 99 416-533 14-113 (335)
282 3lk7_A UDP-N-acetylmuramoylala 89.0 0.35 1.2E-05 51.5 5.2 36 413-449 6-41 (451)
283 3gpi_A NAD-dependent epimerase 89.0 0.35 1.2E-05 47.0 4.8 34 415-448 2-35 (286)
284 3oqb_A Oxidoreductase; structu 89.0 0.4 1.4E-05 49.3 5.4 115 415-553 5-140 (383)
285 1t4b_A Aspartate-semialdehyde 88.9 0.18 6.1E-06 53.0 2.7 90 417-531 2-98 (367)
286 3ip3_A Oxidoreductase, putativ 88.9 0.37 1.3E-05 48.9 5.0 112 417-549 3-120 (337)
287 2raf_A Putative dinucleotide-b 88.9 0.43 1.5E-05 45.4 5.2 37 411-448 14-50 (209)
288 1r0k_A 1-deoxy-D-xylulose 5-ph 88.9 1.4 4.7E-05 46.9 9.5 124 417-553 5-149 (388)
289 3ff4_A Uncharacterized protein 88.7 3 0.0001 37.2 10.3 108 417-562 5-116 (122)
290 1zej_A HBD-9, 3-hydroxyacyl-CO 88.7 1.2 4.2E-05 45.2 8.7 75 416-511 12-86 (293)
291 2nqt_A N-acetyl-gamma-glutamyl 88.6 0.84 2.9E-05 47.7 7.6 99 416-534 9-114 (352)
292 4iin_A 3-ketoacyl-acyl carrier 88.5 0.51 1.8E-05 46.0 5.6 54 394-447 6-61 (271)
293 2ep5_A 350AA long hypothetical 88.5 0.9 3.1E-05 47.1 7.7 103 416-532 4-110 (350)
294 2r00_A Aspartate-semialdehyde 88.5 0.55 1.9E-05 48.5 6.1 92 416-532 3-98 (336)
295 4ej6_A Putative zinc-binding d 88.3 1.9 6.4E-05 44.4 9.9 34 414-448 181-215 (370)
296 3g79_A NDP-N-acetyl-D-galactos 88.3 1.3 4.6E-05 48.1 9.2 32 416-448 18-51 (478)
297 2qrj_A Saccharopine dehydrogen 88.1 1.1 3.7E-05 47.8 8.1 49 400-448 197-249 (394)
298 4fs3_A Enoyl-[acyl-carrier-pro 88.1 0.6 2E-05 45.6 5.7 36 412-448 2-40 (256)
299 3kkj_A Amine oxidase, flavin-c 88.0 0.49 1.7E-05 42.2 4.6 30 418-448 4-33 (336)
300 2hjs_A USG-1 protein homolog; 88.0 0.57 1.9E-05 48.5 5.7 89 417-532 7-101 (340)
301 2cf5_A Atccad5, CAD, cinnamyl 87.9 1 3.5E-05 46.0 7.6 41 407-447 172-212 (357)
302 1gpj_A Glutamyl-tRNA reductase 87.7 0.49 1.7E-05 49.8 5.2 114 413-554 164-289 (404)
303 4dup_A Quinone oxidoreductase; 87.5 1.4 4.7E-05 45.0 8.2 33 414-446 166-199 (353)
304 2yv3_A Aspartate-semialdehyde 87.5 0.26 8.9E-06 50.9 2.9 93 417-532 1-94 (331)
305 3orq_A N5-carboxyaminoimidazol 87.3 3.4 0.00012 42.6 11.2 35 413-448 9-43 (377)
306 3uko_A Alcohol dehydrogenase c 87.3 1.1 3.9E-05 45.9 7.6 32 414-445 192-224 (378)
307 3sxp_A ADP-L-glycero-D-mannohe 87.3 1.6 5.5E-05 43.8 8.5 36 412-447 6-44 (362)
308 3o38_A Short chain dehydrogena 87.1 0.63 2.1E-05 44.9 5.2 33 413-445 19-53 (266)
309 2hq1_A Glucose/ribitol dehydro 86.8 0.81 2.8E-05 43.3 5.7 36 413-448 2-38 (247)
310 1pqw_A Polyketide synthase; ro 86.7 1.2 4E-05 41.1 6.6 33 414-446 37-70 (198)
311 4dpl_A Malonyl-COA/succinyl-CO 86.7 1.3 4.5E-05 46.3 7.7 104 416-533 7-113 (359)
312 4dpk_A Malonyl-COA/succinyl-CO 86.7 1.3 4.5E-05 46.3 7.7 104 416-533 7-113 (359)
313 2vt3_A REX, redox-sensing tran 86.7 0.41 1.4E-05 46.8 3.6 111 319-448 5-119 (215)
314 4a7p_A UDP-glucose dehydrogena 86.5 2.4 8.1E-05 45.6 9.7 119 402-550 308-437 (446)
315 2fp4_A Succinyl-COA ligase [GD 86.4 1.1 3.8E-05 45.8 6.8 117 414-563 11-136 (305)
316 1hdo_A Biliverdin IX beta redu 86.4 0.88 3E-05 41.3 5.5 33 415-447 2-35 (206)
317 2cdc_A Glucose dehydrogenase g 86.4 0.6 2.1E-05 47.8 4.8 31 416-446 181-211 (366)
318 3hdj_A Probable ornithine cycl 86.3 2.2 7.4E-05 43.7 8.9 115 415-554 120-237 (313)
319 3dr3_A N-acetyl-gamma-glutamyl 86.3 1.3 4.5E-05 46.0 7.4 103 417-534 5-110 (337)
320 2q3e_A UDP-glucose 6-dehydroge 86.3 1.4 4.8E-05 47.1 7.8 31 417-448 6-38 (467)
321 4a7p_A UDP-glucose dehydrogena 86.2 0.7 2.4E-05 49.8 5.4 31 417-448 9-39 (446)
322 2o3j_A UDP-glucose 6-dehydroge 86.1 2 6.8E-05 46.3 9.0 31 417-448 10-42 (481)
323 2pzm_A Putative nucleotide sug 86.0 0.7 2.4E-05 46.0 5.0 36 412-447 16-52 (330)
324 1cyd_A Carbonyl reductase; sho 85.9 0.93 3.2E-05 42.8 5.6 35 412-446 3-38 (244)
325 3oig_A Enoyl-[acyl-carrier-pro 85.8 1 3.4E-05 43.5 5.9 34 412-445 3-39 (266)
326 2h7i_A Enoyl-[acyl-carrier-pro 85.7 0.83 2.8E-05 44.4 5.3 33 413-445 4-39 (269)
327 3goh_A Alcohol dehydrogenase, 85.7 1.2 4.2E-05 44.4 6.6 89 413-531 140-230 (315)
328 3ojo_A CAP5O; rossmann fold, c 85.6 4.5 0.00015 43.4 11.3 33 415-448 10-42 (431)
329 3vps_A TUNA, NAD-dependent epi 85.4 0.72 2.5E-05 44.9 4.7 35 413-447 4-39 (321)
330 3tz6_A Aspartate-semialdehyde 85.4 1.2 4.2E-05 46.4 6.6 90 416-532 1-96 (344)
331 4g65_A TRK system potassium up 85.3 4.5 0.00015 43.4 11.2 116 403-549 221-348 (461)
332 3edm_A Short chain dehydrogena 85.3 1.1 3.7E-05 43.5 5.8 37 412-448 4-41 (259)
333 3k96_A Glycerol-3-phosphate de 85.2 1.3 4.6E-05 45.9 6.8 106 415-534 28-136 (356)
334 2z1m_A GDP-D-mannose dehydrata 85.2 0.78 2.7E-05 45.2 4.9 33 414-446 1-34 (345)
335 3d3w_A L-xylulose reductase; u 85.2 1 3.6E-05 42.5 5.6 35 412-446 3-38 (244)
336 3ado_A Lambda-crystallin; L-gu 85.1 0.55 1.9E-05 48.5 3.8 32 416-448 6-37 (319)
337 4id9_A Short-chain dehydrogena 84.9 0.7 2.4E-05 46.0 4.4 37 412-448 15-52 (347)
338 2pnf_A 3-oxoacyl-[acyl-carrier 84.9 1 3.5E-05 42.4 5.4 35 412-446 3-38 (248)
339 3ai3_A NADPH-sorbose reductase 84.8 1.2 4E-05 43.0 5.9 34 412-445 3-37 (263)
340 3awd_A GOX2181, putative polyo 84.8 1.1 3.8E-05 42.7 5.6 34 413-446 10-44 (260)
341 2wsb_A Galactitol dehydrogenas 84.8 1.1 3.8E-05 42.5 5.6 35 412-446 7-42 (254)
342 2c29_D Dihydroflavonol 4-reduc 84.8 0.83 2.8E-05 45.3 4.8 34 414-447 3-37 (337)
343 1zsy_A Mitochondrial 2-enoyl t 84.7 1.7 5.9E-05 44.2 7.3 35 414-448 166-201 (357)
344 3ius_A Uncharacterized conserv 84.6 0.76 2.6E-05 44.4 4.4 32 416-447 5-36 (286)
345 1y1p_A ARII, aldehyde reductas 84.6 1 3.5E-05 44.2 5.4 35 413-447 8-43 (342)
346 1u7z_A Coenzyme A biosynthesis 84.6 1.1 3.6E-05 44.3 5.4 36 413-448 5-57 (226)
347 3pwk_A Aspartate-semialdehyde 84.6 0.96 3.3E-05 47.6 5.4 90 416-532 2-97 (366)
348 2h6e_A ADH-4, D-arabinose 1-de 84.6 1.6 5.4E-05 44.2 6.9 32 415-446 170-203 (344)
349 3lyl_A 3-oxoacyl-(acyl-carrier 84.6 1.1 3.7E-05 42.7 5.4 34 413-446 2-36 (247)
350 2pd6_A Estradiol 17-beta-dehyd 84.5 1.3 4.3E-05 42.4 5.8 35 412-446 3-38 (264)
351 4h15_A Short chain alcohol deh 84.4 1.1 3.6E-05 44.6 5.4 35 412-446 7-42 (261)
352 3mog_A Probable 3-hydroxybutyr 84.4 2.1 7.2E-05 46.4 8.2 32 416-448 5-36 (483)
353 4gkb_A 3-oxoacyl-[acyl-carrier 84.3 1.4 4.7E-05 43.8 6.2 36 411-446 2-38 (258)
354 1d7o_A Enoyl-[acyl-carrier pro 84.3 1.2 4.3E-05 43.7 5.8 35 412-446 4-41 (297)
355 1o5i_A 3-oxoacyl-(acyl carrier 84.2 1.2 4.1E-05 42.9 5.6 35 412-446 15-50 (249)
356 4a2c_A Galactitol-1-phosphate 84.2 2.3 8E-05 42.6 7.9 117 412-553 157-286 (346)
357 4fn4_A Short chain dehydrogena 84.2 1.8 6.1E-05 43.0 6.9 35 413-448 4-39 (254)
358 3qiv_A Short-chain dehydrogena 84.1 1.3 4.4E-05 42.3 5.7 34 412-445 5-39 (253)
359 1xq6_A Unknown protein; struct 84.0 1.3 4.4E-05 41.4 5.6 33 414-446 2-37 (253)
360 2x5o_A UDP-N-acetylmuramoylala 83.9 0.62 2.1E-05 49.4 3.7 37 413-450 2-38 (439)
361 1sby_A Alcohol dehydrogenase; 83.9 1.3 4.4E-05 42.4 5.6 36 413-448 2-38 (254)
362 3ew7_A LMO0794 protein; Q8Y8U8 83.8 1.2 3.9E-05 41.0 5.1 31 417-447 1-32 (221)
363 3nrc_A Enoyl-[acyl-carrier-pro 83.7 1.2 4E-05 43.7 5.4 34 413-446 23-59 (280)
364 1np3_A Ketol-acid reductoisome 83.7 0.61 2.1E-05 47.8 3.4 34 414-448 14-47 (338)
365 4b7c_A Probable oxidoreductase 83.6 2.2 7.7E-05 42.7 7.5 34 413-446 147-181 (336)
366 2wyu_A Enoyl-[acyl carrier pro 83.5 1.1 3.9E-05 43.2 5.1 34 413-446 5-41 (261)
367 2o23_A HADH2 protein; HSD17B10 83.5 1.4 4.6E-05 42.2 5.6 35 412-446 8-43 (265)
368 3rui_A Ubiquitin-like modifier 83.5 0.84 2.9E-05 47.7 4.4 37 413-449 31-67 (340)
369 4g81_D Putative hexonate dehyd 83.4 1 3.5E-05 44.8 4.9 35 413-448 6-41 (255)
370 4fgs_A Probable dehydrogenase 83.4 1.3 4.5E-05 44.5 5.6 40 408-448 21-61 (273)
371 3vku_A L-LDH, L-lactate dehydr 83.4 2.7 9.3E-05 43.4 8.1 35 414-448 7-42 (326)
372 1pjc_A Protein (L-alanine dehy 83.3 1.2 4.2E-05 46.0 5.5 35 413-448 164-198 (361)
373 1lnq_A MTHK channels, potassiu 83.3 2.7 9.2E-05 42.4 8.0 105 416-553 115-232 (336)
374 3k6j_A Protein F01G10.3, confi 83.3 1.7 5.9E-05 47.1 6.9 31 417-448 55-85 (460)
375 3i1j_A Oxidoreductase, short c 83.3 1.3 4.5E-05 42.0 5.4 36 412-448 10-46 (247)
376 1zk4_A R-specific alcohol dehy 83.3 1.3 4.3E-05 42.0 5.2 34 413-446 3-37 (251)
377 2pd4_A Enoyl-[acyl-carrier-pro 83.2 1.2 4.2E-05 43.4 5.2 34 413-446 3-39 (275)
378 2bka_A CC3, TAT-interacting pr 83.2 0.99 3.4E-05 42.4 4.4 33 414-446 16-51 (242)
379 3rd5_A Mypaa.01249.C; ssgcid, 83.2 1.4 4.7E-05 43.4 5.6 35 412-446 12-47 (291)
380 2z1n_A Dehydrogenase; reductas 83.1 1.5 5.3E-05 42.2 5.8 34 412-445 3-37 (260)
381 1h5q_A NADP-dependent mannitol 83.1 1.2 4E-05 42.5 5.0 34 413-446 11-45 (265)
382 3uf0_A Short-chain dehydrogena 83.1 1.5 5.1E-05 43.1 5.8 35 412-446 27-62 (273)
383 2q1w_A Putative nucleotide sug 83.0 1.2 4.2E-05 44.3 5.2 35 413-447 18-53 (333)
384 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.0 1.3 4.5E-05 42.4 5.2 36 412-447 17-53 (274)
385 1fmc_A 7 alpha-hydroxysteroid 82.9 1.1 3.9E-05 42.3 4.8 35 412-446 7-42 (255)
386 3h7a_A Short chain dehydrogena 82.9 1.4 4.7E-05 42.7 5.4 36 412-448 3-39 (252)
387 2ae2_A Protein (tropinone redu 82.9 1.5 5E-05 42.3 5.6 34 412-445 5-39 (260)
388 3vtz_A Glucose 1-dehydrogenase 82.8 1.4 4.6E-05 43.2 5.4 36 411-446 9-45 (269)
389 2ew8_A (S)-1-phenylethanol deh 82.8 1.5 5.3E-05 42.0 5.7 34 412-445 3-37 (249)
390 3afn_B Carbonyl reductase; alp 82.7 1.1 3.8E-05 42.4 4.6 34 413-446 4-38 (258)
391 3svt_A Short-chain type dehydr 82.6 1.5 5.1E-05 42.9 5.6 37 411-448 6-43 (281)
392 3k31_A Enoyl-(acyl-carrier-pro 82.6 1.5 5.1E-05 43.5 5.7 36 412-448 26-64 (296)
393 2bgk_A Rhizome secoisolaricire 82.6 1.6 5.4E-05 42.0 5.7 34 412-445 12-46 (278)
394 3qwb_A Probable quinone oxidor 82.6 2.7 9.3E-05 42.2 7.6 36 412-447 145-181 (334)
395 2fwm_X 2,3-dihydro-2,3-dihydro 82.6 1.5 5.2E-05 42.0 5.6 34 413-446 4-38 (250)
396 1w6u_A 2,4-dienoyl-COA reducta 82.6 1.5 5E-05 43.0 5.5 34 413-446 23-57 (302)
397 2d8a_A PH0655, probable L-thre 82.6 1.2 4.2E-05 45.1 5.1 32 415-446 167-199 (348)
398 3n74_A 3-ketoacyl-(acyl-carrie 82.5 1.6 5.5E-05 41.8 5.7 36 412-448 5-41 (261)
399 1vl8_A Gluconate 5-dehydrogena 82.5 1.6 5.5E-05 42.6 5.7 35 411-445 16-51 (267)
400 3ak4_A NADH-dependent quinucli 82.4 1.6 5.3E-05 42.1 5.6 33 413-445 9-42 (263)
401 1uuf_A YAHK, zinc-type alcohol 82.4 2.9 9.8E-05 43.1 7.9 32 415-446 194-225 (369)
402 3pxx_A Carveol dehydrogenase; 82.4 1.5 5.2E-05 42.5 5.5 35 413-448 7-42 (287)
403 4g65_A TRK system potassium up 82.4 0.59 2E-05 50.3 2.8 32 416-448 3-34 (461)
404 3h2s_A Putative NADH-flavin re 82.4 1.4 4.8E-05 40.7 5.1 30 417-446 1-31 (224)
405 3hwr_A 2-dehydropantoate 2-red 82.3 3.1 0.0001 42.0 7.9 108 412-537 15-126 (318)
406 1h2b_A Alcohol dehydrogenase; 82.3 2.6 9E-05 42.9 7.5 33 414-446 185-218 (359)
407 3rwb_A TPLDH, pyridoxal 4-dehy 82.3 1.5 5.1E-05 42.2 5.4 36 412-448 2-38 (247)
408 4dry_A 3-oxoacyl-[acyl-carrier 82.2 1.1 3.9E-05 44.2 4.6 38 410-448 27-65 (281)
409 1nff_A Putative oxidoreductase 82.2 1.7 5.9E-05 42.1 5.8 34 412-445 3-37 (260)
410 3fbg_A Putative arginate lyase 82.2 2.6 9E-05 42.6 7.4 32 415-446 150-182 (346)
411 1zem_A Xylitol dehydrogenase; 82.2 1.7 5.7E-05 42.1 5.7 34 412-445 3-37 (262)
412 1ks9_A KPA reductase;, 2-dehyd 82.2 1.4 4.7E-05 42.7 5.1 31 417-448 1-31 (291)
413 3imf_A Short chain dehydrogena 82.1 1.4 4.9E-05 42.5 5.2 35 413-448 3-38 (257)
414 1qsg_A Enoyl-[acyl-carrier-pro 82.1 1.5 5E-05 42.5 5.3 34 413-446 6-42 (265)
415 2p91_A Enoyl-[acyl-carrier-pro 82.1 1.4 4.9E-05 43.1 5.3 34 413-446 18-54 (285)
416 2zat_A Dehydrogenase/reductase 82.1 1.5 5E-05 42.3 5.2 34 412-445 10-44 (260)
417 1xg5_A ARPG836; short chain de 82.0 1.4 4.7E-05 42.9 5.1 34 413-446 29-63 (279)
418 3s55_A Putative short-chain de 82.0 1.6 5.5E-05 42.6 5.5 35 413-448 7-42 (281)
419 3r1i_A Short-chain type dehydr 82.0 1.6 5.5E-05 42.9 5.6 35 413-448 29-64 (276)
420 3s2e_A Zinc-containing alcohol 82.0 2.9 9.8E-05 42.1 7.6 33 414-446 165-197 (340)
421 1gu7_A Enoyl-[acyl-carrier-pro 82.0 2.3 7.9E-05 43.1 6.9 34 415-448 166-201 (364)
422 3rkr_A Short chain oxidoreduct 82.0 1.5 5.1E-05 42.5 5.2 35 413-448 26-61 (262)
423 2d1y_A Hypothetical protein TT 82.0 1.6 5.6E-05 42.0 5.5 34 413-446 3-37 (256)
424 3e03_A Short chain dehydrogena 82.0 1.7 5.8E-05 42.5 5.7 35 412-446 2-37 (274)
425 3op4_A 3-oxoacyl-[acyl-carrier 81.9 1.5 5.2E-05 42.2 5.3 34 412-445 5-39 (248)
426 2q2v_A Beta-D-hydroxybutyrate 81.9 1.4 4.6E-05 42.5 4.9 35 413-448 1-36 (255)
427 1yb1_A 17-beta-hydroxysteroid 81.8 1.7 6E-05 42.2 5.7 35 412-446 27-62 (272)
428 3sx2_A Putative 3-ketoacyl-(ac 81.8 1.7 5.7E-05 42.3 5.6 34 412-445 9-43 (278)
429 3tpc_A Short chain alcohol deh 81.8 1.7 5.8E-05 41.8 5.6 35 412-446 3-38 (257)
430 2vn8_A Reticulon-4-interacting 81.8 2.5 8.4E-05 43.3 7.1 33 414-446 182-215 (375)
431 4eso_A Putative oxidoreductase 81.8 1.7 5.7E-05 42.1 5.6 35 413-448 5-40 (255)
432 3tzq_B Short-chain type dehydr 81.7 1.7 5.7E-05 42.5 5.5 36 412-448 7-43 (271)
433 3zwc_A Peroxisomal bifunctiona 81.7 1.2 4.1E-05 51.0 5.1 31 417-448 317-347 (742)
434 1piw_A Hypothetical zinc-type 81.7 2.9 0.0001 42.5 7.6 32 415-446 179-210 (360)
435 3grk_A Enoyl-(acyl-carrier-pro 81.7 1.6 5.6E-05 43.3 5.5 35 413-448 28-65 (293)
436 1hdc_A 3-alpha, 20 beta-hydrox 81.7 1.8 6E-05 41.8 5.6 33 413-445 2-35 (254)
437 2dq4_A L-threonine 3-dehydroge 81.6 1.8 6.2E-05 43.7 6.0 32 415-446 164-196 (343)
438 3f1l_A Uncharacterized oxidore 81.6 1.7 5.9E-05 41.8 5.6 36 412-448 8-44 (252)
439 4b4o_A Epimerase family protei 81.6 1.5 5E-05 42.9 5.1 30 417-446 1-31 (298)
440 1xq1_A Putative tropinone redu 81.5 1.5 5.2E-05 42.0 5.1 35 412-446 10-45 (266)
441 2vns_A Metalloreductase steap3 81.5 1.3 4.3E-05 42.3 4.5 33 415-448 27-59 (215)
442 3pgx_A Carveol dehydrogenase; 81.5 1.7 5.9E-05 42.4 5.6 34 412-445 11-45 (280)
443 1iy8_A Levodione reductase; ox 81.5 1.7 6E-05 42.0 5.6 33 413-445 10-43 (267)
444 3ioy_A Short-chain dehydrogena 81.5 1.7 5.7E-05 43.8 5.6 33 413-445 5-38 (319)
445 2o2s_A Enoyl-acyl carrier redu 81.5 1.5 5.2E-05 43.8 5.2 35 412-446 5-42 (315)
446 3v2g_A 3-oxoacyl-[acyl-carrier 81.5 1.9 6.6E-05 42.3 5.9 37 412-448 27-64 (271)
447 2uvd_A 3-oxoacyl-(acyl-carrier 81.5 1.5 5.3E-05 41.8 5.1 35 413-447 1-36 (246)
448 3zv4_A CIS-2,3-dihydrobiphenyl 81.5 1.8 6.1E-05 42.5 5.7 33 413-445 2-35 (281)
449 4e6p_A Probable sorbitol dehyd 81.4 1.8 6E-05 41.8 5.6 35 413-448 5-40 (259)
450 2b69_A UDP-glucuronate decarbo 81.4 1.5 5.2E-05 43.6 5.2 35 413-447 24-59 (343)
451 3jyn_A Quinone oxidoreductase; 81.4 2.5 8.4E-05 42.4 6.8 35 413-447 138-173 (325)
452 3ijr_A Oxidoreductase, short c 81.4 1.7 5.9E-05 43.0 5.5 34 412-445 43-77 (291)
453 3pk0_A Short-chain dehydrogena 81.4 1.5 5.2E-05 42.5 5.1 35 413-448 7-42 (262)
454 3tqh_A Quinone oxidoreductase; 81.4 2.8 9.4E-05 41.9 7.1 108 413-551 150-264 (321)
455 3p19_A BFPVVD8, putative blue 81.3 1.6 5.4E-05 42.8 5.2 36 411-446 11-47 (266)
456 1gee_A Glucose 1-dehydrogenase 81.3 1.3 4.6E-05 42.2 4.6 34 413-446 4-38 (261)
457 2p4h_X Vestitone reductase; NA 81.3 1.4 4.8E-05 43.0 4.9 31 416-446 1-32 (322)
458 3ruf_A WBGU; rossmann fold, UD 81.3 1.4 4.7E-05 43.9 4.8 35 413-447 22-57 (351)
459 2rh8_A Anthocyanidin reductase 81.2 1.7 5.8E-05 43.0 5.5 32 416-447 9-41 (338)
460 1rkx_A CDP-glucose-4,6-dehydra 81.2 1.4 4.7E-05 44.1 4.8 34 414-447 7-41 (357)
461 3ppi_A 3-hydroxyacyl-COA dehyd 81.2 1.5 5.1E-05 42.7 5.0 35 413-448 27-62 (281)
462 2ag5_A DHRS6, dehydrogenase/re 81.2 1.7 5.7E-05 41.6 5.2 33 413-445 3-36 (246)
463 2jah_A Clavulanic acid dehydro 81.2 1.8 6.3E-05 41.5 5.6 35 413-448 4-39 (247)
464 4hb9_A Similarities with proba 81.1 1.5 5.2E-05 43.9 5.1 31 417-448 2-32 (412)
465 2g5c_A Prephenate dehydrogenas 81.1 1.6 5.5E-05 42.7 5.2 92 417-535 2-100 (281)
466 2c0c_A Zinc binding alcohol de 81.1 2.8 9.6E-05 42.9 7.2 33 414-446 162-195 (362)
467 1iz0_A Quinone oxidoreductase; 81.1 3 0.0001 41.3 7.2 33 414-446 124-157 (302)
468 4b79_A PA4098, probable short- 81.1 2 7E-05 42.5 5.9 34 414-448 9-43 (242)
469 1uls_A Putative 3-oxoacyl-acyl 81.1 1.9 6.4E-05 41.4 5.6 33 413-445 2-35 (245)
470 1e3i_A Alcohol dehydrogenase, 81.0 3 0.0001 42.6 7.4 32 414-445 194-226 (376)
471 3f9i_A 3-oxoacyl-[acyl-carrier 81.0 1.6 5.6E-05 41.5 5.1 36 411-446 9-45 (249)
472 2ptg_A Enoyl-acyl carrier redu 81.0 1.8 6.1E-05 43.2 5.5 35 412-446 5-42 (319)
473 3t4x_A Oxidoreductase, short c 81.0 1.7 6E-05 42.1 5.4 37 411-448 5-42 (267)
474 3is3_A 17BETA-hydroxysteroid d 80.9 1.9 6.5E-05 42.0 5.6 36 412-447 14-50 (270)
475 2o7s_A DHQ-SDH PR, bifunctiona 80.9 1.2 4.2E-05 48.4 4.7 56 392-448 331-395 (523)
476 3lf2_A Short chain oxidoreduct 80.9 1.9 6.5E-05 41.8 5.6 36 412-448 4-40 (265)
477 2dtx_A Glucose 1-dehydrogenase 80.8 1.6 5.5E-05 42.5 5.1 34 413-446 5-39 (264)
478 2j3h_A NADP-dependent oxidored 80.8 2.8 9.7E-05 42.1 7.0 33 414-446 154-187 (345)
479 4egf_A L-xylulose reductase; s 80.8 1.6 5.6E-05 42.4 5.1 35 413-448 17-52 (266)
480 3nkl_A UDP-D-quinovosamine 4-d 80.8 1.9 6.6E-05 37.6 5.1 34 415-448 3-37 (141)
481 1e3j_A NADP(H)-dependent ketos 80.8 1.8 6.1E-05 43.9 5.6 32 414-445 167-198 (352)
482 4dqx_A Probable oxidoreductase 80.7 2 6.7E-05 42.3 5.7 34 412-445 23-57 (277)
483 1yxm_A Pecra, peroxisomal tran 80.7 1.9 6.5E-05 42.3 5.5 34 413-446 15-49 (303)
484 3nyw_A Putative oxidoreductase 80.7 1.6 5.6E-05 42.1 5.0 36 412-448 3-39 (250)
485 1f0y_A HCDH, L-3-hydroxyacyl-C 80.6 1.7 5.7E-05 43.3 5.2 31 417-448 16-46 (302)
486 3ucx_A Short chain dehydrogena 80.6 2.1 7.1E-05 41.5 5.8 36 412-448 7-43 (264)
487 2rhc_B Actinorhodin polyketide 80.6 1.9 6.6E-05 42.2 5.6 33 413-445 19-52 (277)
488 1v3u_A Leukotriene B4 12- hydr 80.6 3.2 0.00011 41.5 7.3 33 414-446 144-177 (333)
489 2qq5_A DHRS1, dehydrogenase/re 80.5 1.8 6.2E-05 41.7 5.2 33 413-445 2-35 (260)
490 4imr_A 3-oxoacyl-(acyl-carrier 80.4 1.7 5.8E-05 42.7 5.1 35 413-448 30-65 (275)
491 3gvc_A Oxidoreductase, probabl 80.4 1.6 5.6E-05 43.0 5.0 33 413-445 26-59 (277)
492 3tjr_A Short chain dehydrogena 80.4 2 6.7E-05 42.8 5.6 35 413-448 28-63 (301)
493 1ae1_A Tropinone reductase-I; 80.4 2 6.8E-05 41.9 5.6 36 412-448 17-53 (273)
494 3ek2_A Enoyl-(acyl-carrier-pro 80.3 2 6.7E-05 41.2 5.4 35 412-446 10-47 (271)
495 3ftp_A 3-oxoacyl-[acyl-carrier 80.3 1.9 6.4E-05 42.3 5.4 36 411-446 23-59 (270)
496 1ooe_A Dihydropteridine reduct 80.3 1.6 5.5E-05 41.3 4.7 33 414-446 1-34 (236)
497 2ydy_A Methionine adenosyltran 80.3 1.4 4.9E-05 43.0 4.5 31 416-446 2-33 (315)
498 3m1a_A Putative dehydrogenase; 80.3 1.6 5.6E-05 42.3 4.9 34 413-446 2-36 (281)
499 1hxh_A 3BETA/17BETA-hydroxyste 80.2 1.6 5.4E-05 42.0 4.7 35 413-448 3-38 (253)
500 1pl8_A Human sorbitol dehydrog 80.2 1.9 6.6E-05 43.8 5.6 33 414-446 170-203 (356)
No 1
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=100.00 E-value=4.3e-128 Score=1035.72 Aligned_cols=397 Identities=46% Similarity=0.830 Sum_probs=385.1
Q ss_pred hhhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccch--HHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEE
Q 007820 190 SKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYV--NIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQ 267 (588)
Q Consensus 190 ~~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~~~~~p~y~--~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVq 267 (588)
..+++.+++.+++|+|+|+||+|||+|+++++.|+|++||+|. .++|+|++|+|+|+|||||+||+|++++|+|||||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~ef~qa~~e~~~~l~~~~~~~p~y~~~~~~e~l~~PeR~i~~~vp~~~D~G~~~v~~GyRvq 86 (450)
T 4fcc_A 7 TYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQ 86 (450)
T ss_dssp --CHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHHHCGGGTSTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred hhhHHHHHHHHHhhCcCChHHHHHHHHHHHHHHHHHHhChhhhhhhHHHHHhCCceEEEEEEEEEECCCcEEEEEEEEEE
Confidence 4468999999999999999999999999999999999999998 59999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCeeeecCCCHHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCc
Q 007820 268 FSQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKD 347 (588)
Q Consensus 268 hs~alGPakGGlRfhp~vt~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~D 347 (588)
||+++|||||||||||++|++|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.+||||++|
T Consensus 87 hn~alGP~kGG~Rfhp~v~l~ev~~La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~d 166 (450)
T 4fcc_A 87 FSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTD 166 (450)
T ss_dssp EECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTE
T ss_pred ECCCCCCCCCceEecCCCCHHHHHHHHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchH
Q 007820 348 LPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKI 427 (588)
Q Consensus 348 VpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNV 427 (588)
||||||||+++||+||+++|+++.+...+++||||+.+|||.+|++||||||+|++++++++++.+++|+||+|||||||
T Consensus 167 vpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnV 246 (450)
T 4fcc_A 167 VPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNV 246 (450)
T ss_dssp EEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHH
T ss_pred CCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChH
Confidence 99999999999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhc-cCChhhhhhccCCceEeCCCCccccccceeecCC
Q 007820 428 AMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ-QRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA 506 (588)
Q Consensus 428 G~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~-~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA 506 (588)
|+++|++|++.|+|||+|||++|+||||+|||+++|..+++.+.. ++++.+|.+.+ ++++++++++|+++||||+|||
T Consensus 247 G~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~-g~~~~~~~~i~~~~~DI~iPcA 325 (450)
T 4fcc_A 247 AQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEF-GLVYLEGQQPWSVPVDIALPCA 325 (450)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHH-TCEEEETCCGGGSCCSEEEECS
T ss_pred HHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccC-CcEEecCcccccCCccEEeecc
Confidence 999999999999999999999999999999999999888887765 46788886655 7889999999999999999999
Q ss_pred CcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhh
Q 007820 507 SQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKL 586 (588)
Q Consensus 507 ~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L 586 (588)
++|+||.++|++|.+++||+|+||||+|+||||+++|++|||+|+||+++||||||+|||||+||+++++|++|||++||
T Consensus 326 l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL~~rGIl~~PD~~aNAGGVi~S~~E~~qn~~~~~w~~eeV~~kL 405 (450)
T 4fcc_A 326 TQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARL 405 (450)
T ss_dssp CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred ccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHHHHCCCEEEChHHhcCccHhhhHHHHhhhcccCCCCHHHHHHHH
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred c
Q 007820 587 Q 587 (588)
Q Consensus 587 ~ 587 (588)
+
T Consensus 406 ~ 406 (450)
T 4fcc_A 406 H 406 (450)
T ss_dssp H
T ss_pred H
Confidence 6
No 2
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=100.00 E-value=8.6e-127 Score=1025.45 Aligned_cols=399 Identities=47% Similarity=0.947 Sum_probs=389.0
Q ss_pred hhhhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEe
Q 007820 189 MSKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (588)
Q Consensus 189 ~~~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqh 268 (588)
..+.++.+++.+++|+|+|+||+|+|+|++++++|+|+++|+|.+++++|++|+|+++|+|||+||+|++++|+||||||
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~ef~qa~~e~~~~~~~~~~~~p~~~~~~~~l~~P~r~i~~~vp~~~D~G~~~v~~GyRvqh 91 (456)
T 3r3j_A 12 VDNQIEELREKVVSKNKNEPEFLQAFEEVLSCLKPVFKKDNVYIGVLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQY 91 (456)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTHHHHHHCTHHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHhhChHhhHHHHhccCCceEEEEEEEEEeCCCcEEEEEEEEEEE
Confidence 35568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcc
Q 007820 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (588)
Q Consensus 269 s~alGPakGGlRfhp~vt~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DV 348 (588)
|+++|||||||||||++|++|+++||++|||||||++||||||||||++||+++|+.||+||||+|+++|.+||||++||
T Consensus 92 n~a~GPakGGiR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~s~~el~r~~r~f~~eL~~~iGp~~Dv 171 (456)
T 3r3j_A 92 NSVLGPYKGGLRFHPAVNLSVIKFLGFEQIFKNSLTTLPMGGGKGGSDFDPKGKSENEILKFCQSFMTNLFRYIGPNTDV 171 (456)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSCCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred CCcCCCccCceEecCCCCHHHHHHHHHHHHHHHHhcCCCCCcceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHH
Q 007820 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (588)
Q Consensus 349 pApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG 428 (588)
|||||||+++||+||+++|+++++.+.|++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||
T Consensus 172 pApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG 251 (456)
T 3r3j_A 172 PAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVA 251 (456)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHHHHHHHHHcCCCccCCEEEEECCCHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc-CChhhhhhccCCceEeCCCCccccccceeecCCC
Q 007820 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS 507 (588)
Q Consensus 429 ~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~-gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~ 507 (588)
+++|++|++.|+|||+|||++|+||||+|||+++|..++++|+.+ +++.+|...+|++++++++++|+++||||+|||+
T Consensus 252 ~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~ 331 (456)
T 3r3j_A 252 QYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYFENQKPWNIPCDIAFPCAT 331 (456)
T ss_dssp HHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEECSCCGGGSCCSEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEeCCccccccCccEEEeCCC
Confidence 999999999999999999999999999999999998777777764 5788888778999999999999999999999999
Q ss_pred cCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 508 QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 508 ~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+|+||.+||++|++++||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|||++||+
T Consensus 332 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~L~ 411 (456)
T 3r3j_A 332 QNEINENDADLFIQNKCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLEMSQNSMRLQWTHQETDMKLQ 411 (456)
T ss_dssp TTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHHHHHTTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred ccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHHHHHHCCCEEeChHHhcCCceeeehHHHhhcccccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
No 3
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=100.00 E-value=1.6e-124 Score=1011.77 Aligned_cols=399 Identities=45% Similarity=0.876 Sum_probs=390.2
Q ss_pred hhhhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEe
Q 007820 189 MSKTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (588)
Q Consensus 189 ~~~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqh 268 (588)
|+++++.+++.+.+|+|+|+||+|++++++++++|+|+.+|+|..++++|++|+|+++|+|||+||+|++++|+||||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~le~l~~Per~i~~~vp~~~D~G~v~v~~Gyrvqh 104 (470)
T 2bma_A 25 VDQEMNNVYERVMKLDPNQVEFLQAFHEILYSLKPLFMEEPKYLPIIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQY 104 (470)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTHHHHHHCTTHHHHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHHHHHhccChhhhHHHHHhcCCceEEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 55568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcc
Q 007820 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (588)
Q Consensus 269 s~alGPakGGlRfhp~vt~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DV 348 (588)
|+++|||||||||||++|++|+++||++|||||||++||||||||||+|||+++|+.|||||||+||++|.+||||++||
T Consensus 105 n~a~GPakGGiR~hp~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~DPk~~S~~El~r~~r~f~~~L~~~iGp~~Dv 184 (470)
T 2bma_A 105 NSALGPYKGGLRFHPSVNLSIVKFLGFEQIFKNSLTGLSMGGGKGGSDFDPKGKSDNEILKFCQAFMNELYRHIGPCTDV 184 (470)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTCSSCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred CCCCCCCCCCeEeeCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCcCCHHHHHHHHHHHHHHhhhccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHH
Q 007820 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (588)
Q Consensus 349 pApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG 428 (588)
|||||||+++||+||+++|+++++.+.|++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||
T Consensus 185 pApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG 264 (470)
T 2bma_A 185 PAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVA 264 (470)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEECSSHHH
T ss_pred cCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHHHHHhccCCcCCCEEEEECCcHHH
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc-CChhhhhhccCCceEeCCCCccccccceeecCCC
Q 007820 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCAS 507 (588)
Q Consensus 429 ~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~-gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~ 507 (588)
+++|++|++.|+|||+|||++|+||||+|||.+++..|+++|+.+ +++.+|.+.+|++++++++++|+++||||+|||+
T Consensus 265 ~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~~~~~~~~~~DI~iPcA~ 344 (470)
T 2bma_A 265 LYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCAT 344 (470)
T ss_dssp HHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECSSCCTTSSCCSEEEECSS
T ss_pred HHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEecCcCeeecCccEEEeccc
Confidence 999999999999999999999999999999999888899999876 7999998778889999989999999999999999
Q ss_pred cCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 508 QNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 508 ~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+|+||.+||.+|++++||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|||++||+
T Consensus 345 ~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L~~rGIl~~PD~~aNAGGV~~S~~E~~qn~~~~~w~~eev~~~L~ 424 (470)
T 2bma_A 345 QNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLEMSQNFQFSHWTRETVDEKLK 424 (470)
T ss_dssp TTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHHHHCCcEEEChHHhhCCCceeeHHHhhccccccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
No 4
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=100.00 E-value=8.5e-119 Score=965.24 Aligned_cols=396 Identities=42% Similarity=0.831 Sum_probs=382.4
Q ss_pred hhHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHhCccchH--HHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEe
Q 007820 191 KTAGSIVEAALKRDPHEIEFIQSVQESLHALERVIAKNSHYVN--IMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQF 268 (588)
Q Consensus 191 ~~~~~~~~~~~~~~p~~~ef~q~v~e~~~~~~~~~~~~p~y~~--~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqh 268 (588)
..++.+++.+.+|+|+|+||+|++++++++++|+|+.+|+|.+ ++++|++|+|+++|+|||+||+|++++|+||||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Per~i~~~vp~~~d~G~~~v~~G~rv~h 81 (449)
T 1bgv_A 2 KYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQF 81 (449)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHTTHHHHHTCHHHHHTTHHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred hHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHhccChhhhhhhHHHHhcCCceEEEEEEEEEeCCCCEEEEeEEEEEE
Confidence 3468899999999999999999999999999999999999996 99999999999999999999999999999999999
Q ss_pred cCCCCCCCCCeeeecCCCHHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCcc
Q 007820 269 SQALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDL 348 (588)
Q Consensus 269 s~alGPakGGlRfhp~vt~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DV 348 (588)
|+++|||||||||||++|++|+++||++|||||||++||||||||||++||+++|+.|++||||+||++|.+||||++||
T Consensus 82 n~~~GPakGGlR~~p~v~~~ev~~La~~mt~KnAl~~lP~GGgKGGi~~dP~~~s~~e~~r~~r~f~~~L~~~ig~~~dv 161 (449)
T 1bgv_A 82 NGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSDFDPNGKSDREVMRFCQAFMTELYRHIGPDIDV 161 (449)
T ss_dssp ECSSSSEEEEEEECTTCCHHHHHHHHHHHHHHHHHTSSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEE
T ss_pred cCCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhhCCCCCCccEEEECCCccCCHHHHHHHHHHHHHHhhheeCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHhhHhCCCC-ccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchH
Q 007820 349 PSEEMGVGTREMGYLFGQYRRLAGHFQ-GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKI 427 (588)
Q Consensus 349 pApDiGt~~reM~~i~~~y~~l~g~~~-g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNV 427 (588)
||||+||+++||+||+++|+++++.+. |++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+|||||||
T Consensus 162 pA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnV 241 (449)
T 1bgv_A 162 PAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNV 241 (449)
T ss_dssp EECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECCSSHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHHHHHHHccCCcCCCEEEEECCCHH
Confidence 999999999999999999999998864 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEEEEEcCCCeeeCCCCC-CHHHHHHHHHHhhcc-CChhhhhhccCCceEeCCCCccccccceeecC
Q 007820 428 AMHVLEKLIAYGAIPVSVSDAKGYLVDEDGF-DYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAKPWNERCDVAFPC 505 (588)
Q Consensus 428 G~~aAe~L~e~GAKVVaVSDs~G~IydpdGL-Die~L~~L~~~k~~~-gsL~~y~~~~p~a~~i~~~eil~~dcDILIPc 505 (588)
|+++|++|+++|+|||+|||++|+||||+|| |.+++..|+++++.+ +++.+|...+ ++++++++++|+++||||+||
T Consensus 242 G~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~-~a~~i~~~e~~~~~~Dil~P~ 320 (449)
T 1bgv_A 242 AWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKF-GVQFFPGEKPWGQKVDIIMPC 320 (449)
T ss_dssp HHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHH-TCEEEETCCGGGSCCSEEECC
T ss_pred HHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhccccc-CCEEeCchhhhcCCcceeecc
Confidence 9999999999999999999999999999999 777777788888876 7899886544 578898889999999999999
Q ss_pred CCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHC-CceEeccccccccCceeeecccccccccCCCCHHHHHh
Q 007820 506 ASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKA-NVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFES 584 (588)
Q Consensus 506 A~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~r-GI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~ 584 (588)
|++|+||.+||.+|..++||+|+||||+|+||+|+++|++| ||+|+||+++|||||++|||||+||+++++|++|||++
T Consensus 321 A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~~~l~~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~ 400 (449)
T 1bgv_A 321 ATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQNSERLSWTAEEVDS 400 (449)
T ss_dssp SCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHHHHCTTCEEECHHHHTTHHHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred ccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHHHHHHHcCCEEEEChHHhcCCCceeehhhhhcccccccccHHHHHH
Confidence 99999999999999888999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhc
Q 007820 585 KLQ 587 (588)
Q Consensus 585 ~L~ 587 (588)
+|+
T Consensus 401 ~L~ 403 (449)
T 1bgv_A 401 KLH 403 (449)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 5
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=100.00 E-value=1.2e-116 Score=942.44 Aligned_cols=366 Identities=29% Similarity=0.474 Sum_probs=356.0
Q ss_pred ccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCCH
Q 007820 208 IEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNL 287 (588)
Q Consensus 208 ~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt~ 287 (588)
..++++++++++.++++++.+|. ++++|++|+|+++|+|||+||+|++++|+|||||||+++|||||||||||++|+
T Consensus 15 ~~~~~~~~~~~~~a~~~~~~~~~---~~~~l~~p~r~~~~~vp~~~d~G~~~v~~GyRvqhn~a~GP~kGGiR~~p~v~~ 91 (424)
T 3k92_A 15 LNLFLSTQTIIKEALRKLGYPGD---MYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEVNE 91 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHH---HHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECCCSSSSEECCEEEETTCCH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHH---HHHHhcCCCeEEEEEEEEEecCCcEEEEEEEEEEECCcCCCCCCCeEecCCCCH
Confidence 35899999999999999999996 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHH
Q 007820 288 SIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQY 367 (588)
Q Consensus 288 ~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y 367 (588)
+|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++|||||||||+++||+||+++|
T Consensus 92 ~ev~~La~~mt~KnAl~~lP~GGgKggi~~DP~~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y 171 (424)
T 3k92_A 92 EKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEY 171 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhCCCC-ccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 368 RRLAGHFQ-GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 368 ~~l~g~~~-g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
++++|.+. +++||||+.+|||.+|++||||||+++++++++.+|.+++|+||+||||||||+++|++|+++|+|||+||
T Consensus 172 ~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavs 251 (424)
T 3k92_A 172 SRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGIS 251 (424)
T ss_dssp HHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 99999874 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhhcCCeE
Q 007820 447 DAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRI 526 (588)
Q Consensus 447 Ds~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~aki 526 (588)
|++|+||||+|||+++| ++++++++++.+| | +++++++++|+.+||||+|||++|+||.+||.+| +||+
T Consensus 252 D~~G~iyd~~GlD~~~l---~~~~~~~g~i~~~----~-a~~~~~~~i~~~~~DIliPcA~~n~I~~~~a~~l---~ak~ 320 (424)
T 3k92_A 252 DANGGLYNPDGLDIPYL---LDKRDSFGMVTNL----F-TDVITNEELLEKDCDILVPAAISNQITAKNAHNI---QASI 320 (424)
T ss_dssp CSSCEEECTTCCCHHHH---HHHCCSSSCCGGG----C-SCCBCHHHHHHSCCSEEEECSCSSCBCTTTGGGC---CCSE
T ss_pred CCCCcEECCCCCCHHHH---HHHHHHhCCCCCC----C-cEEecCccceeccccEEeecCcccccChhhHhhc---CceE
Confidence 99999999999999885 6778888899887 4 7788888999999999999999999999999999 9999
Q ss_pred EEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 527 LVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 527 VvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|++||+
T Consensus 321 V~EgAN~p~t~eA~~iL~~rGI~~~PD~~aNAGGV~vS~~E~~qn~~~~~w~~eeV~~~l~ 381 (424)
T 3k92_A 321 VVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWVQNNQGYYWSEEEVAEKLR 381 (424)
T ss_dssp EECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred EEcCCCCCCCHHHHHHHHHCCCEEECchHhcCCCEEeehhHHHhcccccCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 6
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=100.00 E-value=7.4e-115 Score=932.69 Aligned_cols=368 Identities=29% Similarity=0.492 Sum_probs=357.5
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 007820 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (588)
Q Consensus 207 ~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt 286 (588)
++.|+|++++++++++++|+.+|+ ++++|++|+|+++|+|||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~G~rvqhn~a~GPakGGiR~~p~v~ 104 (440)
T 3aog_A 28 DGGPWEIFTEQVDRVVPYLGRLAP---LAESLKRPKRVLIVDVPVRLDDGSVAYFEGYRVHHNTARGPAKGGVRYHPEVT 104 (440)
T ss_dssp CCTHHHHHHHHHHHHGGGCGGGGG---GGGGGGSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHHhcCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEEEecCC
Confidence 478999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHH
Q 007820 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (588)
Q Consensus 287 ~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~ 366 (588)
++|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 105 ~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~ 184 (440)
T 3aog_A 105 LSEVMALAGWMTIKNAAVGLPYGGGKGGIRVDPRKLSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDT 184 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHhCCC-CccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEE
Q 007820 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 367 y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaV 445 (588)
|++++|.+ .+++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||+++|++|.++|+|||+|
T Consensus 185 y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVav 264 (440)
T 3aog_A 185 YSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAV 264 (440)
T ss_dssp HHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEE
Confidence 99999987 49999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhhcCCe
Q 007820 446 SDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (588)
Q Consensus 446 SDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~ak 525 (588)
||++|+||||+|||+++| .++++.++++.+| +++++++++++|+.+||||+|||++|+||.+||.+| +||
T Consensus 265 sD~~G~i~dp~Gld~~~l---~~~~~~~g~i~~y----~~a~~i~~~ei~~~~~DIlvPcA~~n~i~~~na~~l---~ak 334 (440)
T 3aog_A 265 QDHTGTVYNEAGIDPYDL---LRHVQEFGGVRGY----PKAEPLPAADFWGLPVEFLVPAALEKQITEQNAWRI---RAR 334 (440)
T ss_dssp ECSSCEEECTTCCCHHHH---HHHHHHTSSSTTC----TTSEECCHHHHTTCCCSEEEECSSSSCBCTTTGGGC---CCS
T ss_pred EcCCcEEECCCCCCHHHH---HHHHHhcCCcccC----CCceEcCchhhhcCCCcEEEecCCcCccchhhHHHc---CCc
Confidence 999999999999999886 5666678888876 678888888899999999999999999999999999 999
Q ss_pred EEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 526 ILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 526 iVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+
T Consensus 335 ~VvEgAN~p~t~eA~~iL~~~GI~~~PD~~aNaGGV~vS~~E~~qN~~~~~w~~eev~~~l~ 396 (440)
T 3aog_A 335 IVAEGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFEWVQDFNSYFWTEEEINARLE 396 (440)
T ss_dssp EEECCSSSCBCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred EEEecCccccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 7
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=100.00 E-value=1.5e-114 Score=937.70 Aligned_cols=372 Identities=26% Similarity=0.476 Sum_probs=352.7
Q ss_pred CCCccHHHHHHHHHHHHHHHHHh---------------CccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEec
Q 007820 205 PHEIEFIQSVQESLHALERVIAK---------------NSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFS 269 (588)
Q Consensus 205 p~~~ef~q~v~e~~~~~~~~~~~---------------~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs 269 (588)
..+|+|+++|..+++.++.+++. .+.|..++++|++|+|+|+|+|||+||+|++++|+|||||||
T Consensus 4 ~~~~~f~~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~p~r~i~~~vp~~~D~G~~~v~~GyRvqhn 83 (501)
T 3mw9_A 4 EDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHS 83 (501)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHCCCTTCSSHHHHHHHHHHHHHSSCSEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhhhhHHHHHHHhCCCeEEEEEEEEEeCCCCEEEeeeEEEEEC
Confidence 45789999999999999988874 245778999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeeecCCCHHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHh--hcCCCCc
Q 007820 270 QALGPCRGGLRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHR--YLGPDKD 347 (588)
Q Consensus 270 ~alGPakGGlRfhp~vt~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r--~IGp~~D 347 (588)
+++|||||||||||+||++|+++||++|||||||++||||||||||++||+++|+.|+|||||+||++|.+ ||||++|
T Consensus 84 ~a~GP~kGGiR~hp~v~l~ev~~La~~MT~KnAl~~LP~GGgKGgi~~DPk~~s~~El~r~~r~f~~eL~~~~~IGp~~d 163 (501)
T 3mw9_A 84 QHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVD 163 (501)
T ss_dssp CSSSSEECCEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHTTSCBTTTE
T ss_pred CCcCCCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCCCcceEEecCCccCCHHHHHHHHHHHHHHHhhccCCCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred cCCCCCCCChhHHHHHHHHHhhHhCCC----CccccCCcccccCCCCCCCccHHHHHHHHHHHHH------HhCC--CCC
Q 007820 348 LPSEEMGVGTREMGYLFGQYRRLAGHF----QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILA------DMNK--ELK 415 (588)
Q Consensus 348 VpApDiGt~~reM~~i~~~y~~l~g~~----~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~------~~g~--~l~ 415 (588)
||||||||+++||+||+++|+++.|.+ .+++||||+.+|||.+|++||||||+++++++++ .+|. +|+
T Consensus 164 ipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~ 243 (501)
T 3mw9_A 164 VPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG 243 (501)
T ss_dssp ECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSST
T ss_pred EecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcC
Confidence 999999999999999999999999975 5899999999999999999999999999998653 5775 699
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
|+||+||||||||+++|++|++.|+|||+|||++|+||||+|||+++| .++++.++++..| |+++++++ ++|
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l---~~~k~~~g~i~~~----~~a~~~~~-~il 315 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKEL---EDFKLQHGTILGF----PKAKIYEG-SIL 315 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHH---HHHHHHHSSSTTC----TTSEEECS-CGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHH---HHHHHhcCCeecc----cCceeecc-ccc
Confidence 999999999999999999999999999999999999999999999886 5566777888765 78888865 899
Q ss_pred ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccC
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMV 575 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~ 575 (588)
+++||||+|||++|+||.+||++| +||+||||||+|+||+|+++|++|||+|+||+++|||||++|||||+||++++
T Consensus 316 ~~~~DIliPcA~~n~I~~~na~~l---~akiV~EgAN~p~T~eA~~iL~~rGIl~~PD~~aNAGGV~vSy~E~~qn~~~~ 392 (501)
T 3mw9_A 316 EVDCDILIPAASEKQLTKSNAPRV---KAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHV 392 (501)
T ss_dssp GSCCSEEEECSSSCCBCTTTGGGC---CCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCS
T ss_pred cccceEEeeccccCccCHhHHHHc---CceEEEeCCCCcCCHHHHHHHHHCCCEEEChHHhcCchHHhhHHHHHhccccc
Confidence 999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred C--------------CCHHHHHhhhc
Q 007820 576 H--------------WSPEDFESKLQ 587 (588)
Q Consensus 576 ~--------------ws~eeV~~~L~ 587 (588)
+ |++++|+++|+
T Consensus 393 ~~grl~~~~e~~~~~w~~~~v~~~l~ 418 (501)
T 3mw9_A 393 SYGRLTFKYERDSNYHLLMSVQESLE 418 (501)
T ss_dssp CTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhcccccccHHHHHHHHH
Confidence 5 99999999885
No 8
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=3.6e-114 Score=923.43 Aligned_cols=367 Identities=28% Similarity=0.458 Sum_probs=353.3
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeec
Q 007820 204 DPHEIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHP 283 (588)
Q Consensus 204 ~p~~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp 283 (588)
.+..+.|+|++++++++++++|+.+|+ ++++|++|+|+++|+|||+||+|++++|+|||||||+++|||||||||||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~hn~~~GPakGGiR~~p 84 (419)
T 3aoe_E 8 PPEDPGLWDTYLEWLERALKVAGVHPT---TLEYLAHPKRLVTLSLPVVMDDGKVRIFQGYRVVHDIARGPAKGGVRLDP 84 (419)
T ss_dssp CSSCCHHHHHHHHHHHHHHTTSCCCHH---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECSSSSEEEEEEECT
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCHH---HHhhcCCCCeEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCeEecC
Confidence 345667999999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHH
Q 007820 284 SMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYL 363 (588)
Q Consensus 284 ~vt~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i 363 (588)
++|++|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||
T Consensus 85 ~v~~~ev~~La~~mt~KnAl~~lP~GGgKGgi~~dP~~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~ 164 (419)
T 3aoe_E 85 GVTLGQTAGLAAWMTLKAAVYDLPFGGAAGGIAVDPKGLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWI 164 (419)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCSCEEEEEEECSCGGGSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhccCCCCCccEEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHhCCC-CccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeE
Q 007820 364 FGQYRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIP 442 (588)
Q Consensus 364 ~~~y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKV 442 (588)
+++|++++|++ .+++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||+++|++|++.|+||
T Consensus 165 ~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakV 244 (419)
T 3aoe_E 165 MDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMRV 244 (419)
T ss_dssp HHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEE
Confidence 99999999987 49999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhhc
Q 007820 443 VSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNS 522 (588)
Q Consensus 443 VaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~ 522 (588)
|+|||++|+||||+|||+++| .++++.++++.+| .++++++|..+||||+|||++|+||.++|++|
T Consensus 245 VavsD~~G~i~dp~Gld~~~l---~~~~~~~g~v~~~--------~~~~~e~~~~~~DVliP~A~~n~i~~~~A~~l--- 310 (419)
T 3aoe_E 245 VAVATSMGGMYAPEGLDVAEV---LSAYEATGSLPRL--------DLAPEEVFGLEAEVLVLAAREGALDGDRARQV--- 310 (419)
T ss_dssp EEEEETTEEEECTTCCCHHHH---HHHHHHHSSCSCC--------CBCTTTGGGSSCSEEEECSCTTCBCHHHHTTC---
T ss_pred EEEEcCCCeEECCCCCCHHHH---HHHHHhhCCccee--------eccchhhhccCceEEEecccccccccchHhhC---
Confidence 999999999999999999986 5556666777765 24667899999999999999999999999999
Q ss_pred CCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 523 GCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 523 ~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+
T Consensus 311 ~ak~V~EgAN~p~t~~A~~~L~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~eev~~~l~ 375 (419)
T 3aoe_E 311 QAQAVVEVANFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLEWVQDLNMFFWSPEEVRERFE 375 (419)
T ss_dssp CCSEEEECSTTCBCHHHHHHHHHHTCEEECHHHHTCHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CceEEEECCCCcCCHHHHHHHHHCCCEEECHHHHhCCCchhhHHHHhhcccccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 9
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=100.00 E-value=1e-113 Score=921.03 Aligned_cols=366 Identities=25% Similarity=0.471 Sum_probs=337.2
Q ss_pred cHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCCHH
Q 007820 209 EFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS 288 (588)
Q Consensus 209 ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt~~ 288 (588)
.|+|++++++++++++|+.+|. ++++|++|+|+++|+|||+||+|++++|+|||||||+++|||||||||||++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~p~r~i~~~~p~~~d~G~~~~~~g~rv~hn~~~GP~kGGiR~~p~v~~~ 82 (421)
T 2yfq_A 6 NPLVAAQEKVRIACEKLGCDPA---VYELLKEPQRVIEISIPVKMDDGTVKVFKGWRSAHSSAVGPSKGGVRFHPNVNMD 82 (421)
T ss_dssp CHHHHHHHHHHHHHHHHTCCHH---HHHHHSSCSEEEEEEEEEEETTTEEEEEEEEEEECCCSSSSEEEEEEEESSCCHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHH---HHhhccCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCCHH
Confidence 4899999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHh
Q 007820 289 IAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYR 368 (588)
Q Consensus 289 evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~ 368 (588)
|+++||++|||||||++||||||||||++||+++|+.|+|||||+|+++|.++|||++||||||+||+++||+||+++|+
T Consensus 83 ev~~La~~mt~KnAl~~lP~GGgKggi~~dP~~~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~ 162 (421)
T 2yfq_A 83 EVKALSLWMTFKGGALGLPYGGGKGGICVDPAELSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYV 162 (421)
T ss_dssp HHHHHHHHHHHHHHHHTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcceEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhCCC--CccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 369 RLAGHF--QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 369 ~l~g~~--~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
++++.+ .+++||||+.+|||.+|++||||||+++++++++++|.+++|+||+||||||||+++|++|+++|+|||+||
T Consensus 163 ~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavs 242 (421)
T 2yfq_A 163 KLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIA 242 (421)
T ss_dssp HHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECC
T ss_pred HhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 999985 599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC-----CeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhh
Q 007820 447 DAK-----GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN 521 (588)
Q Consensus 447 Ds~-----G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~ 521 (588)
|++ |+||||+|||+++| .++++.++++.+| +++++++++++|+.+||||+|||++|+||.+||.+|
T Consensus 243 D~~~~~~~G~i~d~~Gld~~~l---~~~~~~~g~i~~~----~~a~~i~~~~~~~~~~DIliP~A~~n~i~~~~A~~l-- 313 (421)
T 2yfq_A 243 EWDRNEGNYALYNENGIDFKEL---LAYKEANKTLIGF----PGAERITDEEFWTKEYDIIVPAALENVITGERAKTI-- 313 (421)
T ss_dssp BCCSSSCSBCCBCSSCCCHHHH---HHHHHHHCC-------------------------CEEECSCSSCSCHHHHTTC--
T ss_pred ecCCCccceEEECCCCCCHHHH---HHHHHhcCCcccC----CCceEeCccchhcCCccEEEEcCCcCcCCcccHHHc--
Confidence 999 99999999999886 5566667888876 678888889999999999999999999999999999
Q ss_pred cCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 522 SGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 522 ~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+||+||||||+|+|++|+++|+++||+|+||+++|||||++|||||+||.++++|++|+|++||+
T Consensus 314 -~ak~VvEgAN~P~t~ea~~il~~~GI~~~Pd~~aNaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~ 378 (421)
T 2yfq_A 314 -NAKLVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYEWVQNQYGYYWTEAEVEEKQE 378 (421)
T ss_dssp -CCSEEECCSSSCSCHHHHHHHHHHTCEEECHHHHTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred -CCeEEEeCCccccCHHHHHHHHHCCCEEEChHHHhCCCeEEEEEEEEecCccCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 10
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=100.00 E-value=3.6e-111 Score=899.65 Aligned_cols=368 Identities=28% Similarity=0.489 Sum_probs=356.1
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 007820 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (588)
Q Consensus 207 ~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt 286 (588)
++.|+|++++++++++++|+.+|+ ++++|++|+|+|+|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~~~~p~~~D~G~~~~~~g~rv~~~~~~GpakGGiR~~p~v~ 78 (415)
T 2tmg_A 2 EKSLYEMAVEQFNRAASLMDLESD---LAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVT 78 (415)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCHH---HHHHHHSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEEESSCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHhcCCCCeEEEEEEEEEecCCcEEEEEEEEEEECCCCCCCCCcEEeeCCCC
Confidence 567999999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHH
Q 007820 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (588)
Q Consensus 287 ~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~ 366 (588)
++|+++||++|||||||++||||||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 79 ~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~ 158 (415)
T 2tmg_A 79 LDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDE 158 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEEEECCGGGSCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHhCCC-CccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHH-CCCeEEE
Q 007820 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVS 444 (588)
Q Consensus 367 y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e-~GAKVVa 444 (588)
|++++|.. .+++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|++ +|+|||+
T Consensus 159 y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVa 238 (415)
T 2tmg_A 159 YEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVA 238 (415)
T ss_dssp HHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEE
Confidence 99999986 599999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhhcCC
Q 007820 445 VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGC 524 (588)
Q Consensus 445 VSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~a 524 (588)
|||++|+||||+|||+++| .++++.++++.+| +++++++++++|..+||||+|||++|+||++||.+| +|
T Consensus 239 vsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~~y----~~a~~~~~~eil~~~~DIliP~A~~n~i~~~~a~~l---~a 308 (415)
T 2tmg_A 239 VSDSRGGIYNPEGFDVEEL---IRYKKEHGTVVTY----PKGERITNEELLELDVDILVPAALEGAIHAGNAERI---KA 308 (415)
T ss_dssp EECSSCEEECTTCCCHHHH---HHHHHHSSCSTTC----SSSEEECHHHHTTCSCSEEEECSSTTSBCHHHHTTC---CC
T ss_pred EEeCCCeEECCCCCCHHHH---HHHHHhhCCcccC----CCceEcCchhhhcCCCcEEEecCCcCccCcccHHHc---CC
Confidence 9999999999999999886 5666677888876 678888888899999999999999999999999999 99
Q ss_pred eEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 525 RILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 525 kiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
|+|+||||+|+|++|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+
T Consensus 309 k~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~s~~E~vqN~~~~~w~~e~v~~~l~ 371 (415)
T 2tmg_A 309 KAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFEWVQDLQSFFWDLDQVRNALE 371 (415)
T ss_dssp SEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTCHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred eEEEeCCCcccCHHHHHHHHHCCCEEEChHHHhCCCceEEEEEEEecCccccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 11
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=7.6e-112 Score=905.97 Aligned_cols=368 Identities=26% Similarity=0.441 Sum_probs=355.1
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 007820 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (588)
Q Consensus 207 ~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt 286 (588)
.+.|+|++++++++++++|+.+|. ++++|.+|+|+|+|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~P~r~i~v~~p~~~D~G~~~~~~G~rv~~~~~~GpakGG~R~~p~v~ 79 (421)
T 1v9l_A 3 RTGFLEYVLNYVKKGVELGGFPED---FYKILSRPRRVLIVNIPVRLDGGGFEVFEGYRVQHCDVLGPYKGGVRFHPEVT 79 (421)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHH---HHHHHHSCSEEEEEEEEEECSSSCEEEEEEEEEEEECSSSSEEEEEECCTTCC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHH---HHHhccCCceEEEEEEEEEecCCcEEEEEEEEeecCCcCCCccccEEecCCCC
Confidence 356999999999999999999996 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHH
Q 007820 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (588)
Q Consensus 287 ~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~ 366 (588)
++|+++||++|||||||++||||||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 80 ~~ev~~La~~mt~KnAl~~lP~GG~KGgi~~dP~~~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~ 159 (421)
T 1v9l_A 80 LADDVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDE 159 (421)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCCEEEEEECSCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHhCCC-CccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEE
Q 007820 367 YRRLAGHF-QGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 367 y~~l~g~~-~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaV 445 (588)
|++++|.. .+++||||+.+|||.+|+++|||||+++++++++++|.+++|+||+||||||||+++|++|.++|+|||+|
T Consensus 160 y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVav 239 (421)
T 1v9l_A 160 YSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAV 239 (421)
T ss_dssp HHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHhCCCCCCeEeccchhhCCCCCcccchHHHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEE
Confidence 99999986 49999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeeeCCCCCCHHHHHHHHHHhhccCC--hhhhhhccCCc---eEe-CCCCccccccceeecCCCcCccchhhHHhh
Q 007820 446 SDAKGYLVDEDGFDYMKISFLRDIKSQQRS--LRDYSKTYARS---KYY-DEAKPWNERCDVAFPCASQNEIDQSDAINL 519 (588)
Q Consensus 446 SDs~G~IydpdGLDie~L~~L~~~k~~~gs--L~~y~~~~p~a---~~i-~~~eil~~dcDILIPcA~~n~It~enA~~l 519 (588)
||++|+||||+|||+++| .++++.+++ +.+|. ++ +.+ +++++|+.+||||+|||++|+||.+||.+|
T Consensus 240 sD~~G~i~dp~GlD~~~l---~~~k~~~g~~~v~~y~----~~~~~~~~~~~~~~~~~~~Dil~P~A~~~~I~~~~a~~l 312 (421)
T 1v9l_A 240 SDINGVAYRKEGLNVELI---QKNKGLTGPALVELFT----TKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNAGLV 312 (421)
T ss_dssp ECSSCEEECTTCCCTHHH---HHTTTSCHHHHHHHHH----HTSCCCCCSSTTGGGGCCCSEEEECSCSSCBCTTTTTTC
T ss_pred ECCCcEEECCCCCCHHHH---HHHHHhhCCccccccc----cccCceEeCCchhhhcCCccEEEecCcCCccchhhHHHc
Confidence 999999999999999885 667777778 88773 44 667 788999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 520 VNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 520 ~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+||+|+||||+|+||+|+++|++|||+|+||+++|||||++|||||+||+++++|++|+|+++|+
T Consensus 313 ---~ak~V~EgAN~p~t~~a~~~l~~~Gi~~~PD~~aNaGGV~~S~~E~~qn~~~~~w~~e~v~~~l~ 377 (421)
T 1v9l_A 313 ---KARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLE 377 (421)
T ss_dssp ---CCSEEECCSSSCBCHHHHHHHHTTTCEEECHHHHSTHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred ---CceEEEecCCCcCCHHHHHHHHHCCCEEeChHHhhCCCeeeeHHHHHhhccccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 12
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=100.00 E-value=1.4e-98 Score=804.49 Aligned_cols=368 Identities=28% Similarity=0.429 Sum_probs=350.7
Q ss_pred CccHHHHHHHHHHHHHHHHHhCccchHHHHhhcCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCC
Q 007820 207 EIEFIQSVQESLHALERVIAKNSHYVNIMERLLEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMN 286 (588)
Q Consensus 207 ~~ef~q~v~e~~~~~~~~~~~~p~y~~~~e~L~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt 286 (588)
++.|+|++++++++++++|+.+|. ++++|++|+|+|.|++||+||+|++++|+|||||||+++|||||||||||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~p~r~~~~~~p~~~d~G~~~~~~g~rv~~~~~~Gp~kGG~R~~~~~~ 78 (419)
T 1gtm_A 2 EADPYEIVIKQLERAAQYMEISEE---ALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEET 78 (419)
T ss_dssp -CTHHHHHHHHHHHHGGGSCCCHH---HHHHHTSCSEEEEEEEEEECTTSCEEEEEEEEEEEECTTSSEECCEEECTTCC
T ss_pred CccHHHHHHHHHHHHHHHhCCChh---hhhcCCCCceEEEEEEEEEecCCCEEEEEEEEEEECCCCCCCcCCEEeeCCCC
Confidence 467999999999999999999996 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhhhhcccCCCCCCceEEEecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHH
Q 007820 287 LSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQ 366 (588)
Q Consensus 287 ~~evkaLA~~MT~KnAL~gLP~GGaKGGI~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~ 366 (588)
++|+++||++|||||||++||||||||||++||+++|+.|++||||+|+++|.++|||++||||||+||+++||+||+++
T Consensus 79 ~~ev~~La~~mt~Knal~~lp~GG~Kggi~~dP~~~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~~~~m~~~~~~ 158 (419)
T 1gtm_A 79 LSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDE 158 (419)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEEEEEECCGGGSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHhCCC-C--ccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCC-CCCcEEEEeccchHHHHHHHHHHH-CCCe
Q 007820 367 YRRLAGHF-Q--GSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKE-LKGLRCVVSGSGKIAMHVLEKLIA-YGAI 441 (588)
Q Consensus 367 y~~l~g~~-~--g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~-l~GkrVaIQGfGNVG~~aAe~L~e-~GAK 441 (588)
|++++|.. . |++||||+.+|||.+|+++|||||+++++++++.+|.+ |+|+||.||||||||+++|++|.+ .|++
T Consensus 159 y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~k 238 (419)
T 1gtm_A 159 YETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMK 238 (419)
T ss_dssp HHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred HHHhhCCCCCccceEecCcchhCCCCCCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCE
Confidence 99999986 4 89999999999999999999999999999999999998 999999999999999999999999 9999
Q ss_pred EEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhh
Q 007820 442 PVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN 521 (588)
Q Consensus 442 VVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~ 521 (588)
||+++|++|.+|+++|+|+++| .+.++..++|..| |..+.++.+++|..+||||||||.+++||+++++.|
T Consensus 239 Vv~~sD~~g~~~~~~gvdl~~L---~~~~d~~~~l~~l----~~t~~i~~~~l~~mk~dilIn~ArG~~Vde~a~~aL-- 309 (419)
T 1gtm_A 239 VVAVSDSKGGIYNPDGLNADEV---LKWKNEHGSVKDF----PGATNITNEELLELEVDVLAPAAIEEVITKKNADNI-- 309 (419)
T ss_dssp EEEEECSSCEEEEEEEECHHHH---HHHHHHHSSSTTC----TTSEEECHHHHHHSCCSEEEECSCSCCBCTTGGGGC--
T ss_pred EEEEeCCCccccCccCCCHHHH---HHHHHhcCEeecC----ccCeeeCHHHHHhCCCCEEEECCCcccCCHHHHHHh--
Confidence 9999999999999999999886 4444444566544 566677777889999999999999999999999888
Q ss_pred cCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 522 SGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 522 ~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
+|+.|+||||+|+|+++..+|..+||++.||+++|||||++||+||+||+++++|+.+||+++|+
T Consensus 310 -~~~~I~~aAneP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~ 374 (419)
T 1gtm_A 310 -KAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLD 374 (419)
T ss_dssp -CCSEEECCSSSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred -cCCEEEEeeCCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 13
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=100.00 E-value=2.8e-80 Score=650.52 Aligned_cols=298 Identities=21% Similarity=0.241 Sum_probs=269.0
Q ss_pred cCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCCHH----HHHHHhHhhhhhhcccCCCCCCceEE
Q 007820 239 LEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS----IAKFLGFEQTLKNALSPYKLGGAAGG 314 (588)
Q Consensus 239 ~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt~~----evkaLA~~MT~KnAL~gLP~GGaKGG 314 (588)
..||+++.++- ..- .++|||||||+++|||||||||||++|++ |+++||++|||||||++|||||||||
T Consensus 8 ~~~e~v~~~~d----~~~---~~~~~~~~h~~~~GP~kGG~R~~p~v~~~~~~~ev~~La~~mt~K~al~~lp~GG~Kgg 80 (355)
T 1c1d_A 8 WDGEMTVTRFD----AMT---GAHFVIRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGGKSV 80 (355)
T ss_dssp CCSSEEEEEEE----TTT---TEEEEEEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCccEEEEEEc----ccc---ceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhhCCCCCCceee
Confidence 57999888764 333 36999999999999999999999999976 78999999999999999999999999
Q ss_pred Eec-CCCC-CCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCC
Q 007820 315 SDF-DPKG-KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRT 392 (588)
Q Consensus 315 I~~-DP~~-~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~ 392 (588)
|++ ||+. +|..|.++++|+|.+.+..++|+ |||||||||+++||+||+++|+ ++||||+.+|||.+|+
T Consensus 81 i~~~dP~~~~s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~--------~~tGk~~~~GGs~~~~ 150 (355)
T 1c1d_A 81 IALPAPRHSIDPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTE--------FVFGRSLERGGAGSSA 150 (355)
T ss_dssp EECSSCGGGCCHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCS--------CBCCCCGGGTSCCCCH
T ss_pred EeccCcccccChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcC--------eeeccchhhCCCCCch
Confidence 999 9999 89888888888887777777775 7899999999999999999986 4899999999999999
Q ss_pred CccHHHHHHHHHHHHHHhCC-CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhh
Q 007820 393 EATGYGLVFFAQLILADMNK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (588)
Q Consensus 393 eATG~GV~~~i~~~l~~~g~-~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~ 471 (588)
++|||||+++++++++++|. +++||||+||||||||+++|++|.+.|+||| ++|++ .++.
T Consensus 151 ~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~----------~~~~-------- 211 (355)
T 1c1d_A 151 FTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD----------TERV-------- 211 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC----------HHHH--------
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC----------ccHH--------
Confidence 99999999999999999997 8999999999999999999999999999998 99973 2211
Q ss_pred ccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCH-HHHHHHHHCCceE
Q 007820 472 QQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVDVLKKANVLI 550 (588)
Q Consensus 472 ~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~iL~~rGI~v 550 (588)
+|.+.+ ++++++.+++|..+|||++|||++|+||.+++..| +|++|+|+||+|+|+ +|.++|+++||+|
T Consensus 212 ------~~a~~~-ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv 281 (355)
T 1c1d_A 212 ------AHAVAL-GHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTL---DCSVVAGAANNVIADEAASDILHARGILY 281 (355)
T ss_dssp ------HHHHHT-TCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEE
T ss_pred ------HHHHhc-CCEEeChHHhhcCccceecHhHHHhhcCHHHHhhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEE
Confidence 111122 56777778899999999999999999999999999 999999999999885 9999999999999
Q ss_pred eccccccccCceeee-cccccccccCCCCHHHHHhhhcC
Q 007820 551 APAMAAGAGGVVAGE-LELNQECNMVHWSPEDFESKLQV 588 (588)
Q Consensus 551 iPD~laNAGGVivS~-~E~~qN~~~~~ws~eeV~~~L~~ 588 (588)
+||+++|||||++|| ||| ++|++|+|++||+.
T Consensus 282 ~Pd~~aNaGGV~~s~~~E~------~~w~~e~v~~~l~~ 314 (355)
T 1c1d_A 282 APDFVANAGGAIHLVGREV------LGWSESVVHERAVA 314 (355)
T ss_dssp CCHHHHTTHHHHHHHHHHT------TCCCHHHHHHHHHT
T ss_pred ECCeEEcCCCeeeeeeehh------cCCCHHHHHHHHHH
Confidence 999999999999999 999 68999999999874
No 14
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=100.00 E-value=2e-76 Score=623.18 Aligned_cols=295 Identities=21% Similarity=0.292 Sum_probs=264.6
Q ss_pred cCCCeEEEEEEeEEcCCCCeEEEEEEEEEecCCCCCCCCCeeeecCCCHH----HHHHHhHhhhhhhcccCCCCCCceEE
Q 007820 239 LEPERMIVFRVPWVDDRGETHVNRGFRVQFSQALGPCRGGLRFHPSMNLS----IAKFLGFEQTLKNALSPYKLGGAAGG 314 (588)
Q Consensus 239 ~~Per~i~frvp~~dd~G~v~v~rGyRVqhs~alGPakGGlRfhp~vt~~----evkaLA~~MT~KnAL~gLP~GGaKGG 314 (588)
..||+++.++ |... .++|||||||+++|||||||||||++|++ |+++||++|||||||++|||||||||
T Consensus 10 ~~~e~v~~~~----d~~~---~~~~~~~~h~~~~Gp~kGG~R~~p~v~~~~~~~e~~~La~~mt~K~al~~lp~GG~Kgg 82 (364)
T 1leh_A 10 YDYEQLVFCQ----DEAS---GLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARGMTYKNAAAGLNLGGGKTV 82 (364)
T ss_dssp HTCCEEEEEE----ETTT---TEEEEEEEEECSSSSEECCEEEECCSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred cCCeEEEEEE----ccCc---ceEEEEEEECCCCCCCCCcEEecCCCChHHHHHHHHHHHHHHHHHHHhcCCCCcCcceE
Confidence 4589888775 3333 36999999999999999999999999976 78999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCc
Q 007820 315 SDFDPKGKSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEA 394 (588)
Q Consensus 315 I~~DP~~~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eA 394 (588)
|++||+++|.++++|+|.+||.+|. |+ ||||||+||+++||+||+++|+ ++||||+.+|||.+|+++
T Consensus 83 i~~dP~~~~~~~~~r~~~~~~~~l~---g~--~i~A~D~Gt~~~~m~~l~~~~~--------~~tGK~~~~ggs~~~~~a 149 (364)
T 1leh_A 83 IIGDPFADKNEDMFRALGRFIQGLN---GR--YITAEDVGTTVDDMDLIHQETD--------YVTGISPAFGSSGNPSPV 149 (364)
T ss_dssp EESCTTTTCCHHHHHHHHHHHHTTT---TS--EEBCBCTTCCHHHHHHHHTTCS--------CBCSCCHHHHHHCCHHHH
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHhc---Cc--eEEcccCCCCHHHHHHHHHhcc--------hhcccccccCCCCCcccc
Confidence 9999999999999998888888774 43 6799999999999999999975 479999999999999999
Q ss_pred cHHHHHHHHHHHHHH-hCC-CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhc
Q 007820 395 TGYGLVFFAQLILAD-MNK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ 472 (588)
Q Consensus 395 TG~GV~~~i~~~l~~-~g~-~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~ 472 (588)
|||||+|++++++++ +|. +|+|+||+|||+||||+++|++|.+.|++|| ++|. |.+++..+.+
T Consensus 150 Tg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~----------~~~~l~~~a~---- 214 (364)
T 1leh_A 150 TAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV----------NKAAVSAAVA---- 214 (364)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHHHHHH----
T ss_pred hhhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEcC----------CHHHHHHHHH----
Confidence 999999999999998 485 8999999999999999999999999999987 9985 4555422221
Q ss_pred cCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCC-HHHHHHHHHCCceEe
Q 007820 473 QRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAVDVLKKANVLIA 551 (588)
Q Consensus 473 ~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~~iL~~rGI~vi 551 (588)
.+ ++++++.+++|..+|||++|||++++||.++++.+ +|++|+|+||+|+| +++.++|+++||+|+
T Consensus 215 ---------~~-ga~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~l---g~~iV~e~An~p~t~~ea~~~L~~~Gi~~~ 281 (364)
T 1leh_A 215 ---------EE-GADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQL---KAKVIAGSADNQLKDPRHGKYLHELGIVYA 281 (364)
T ss_dssp ---------HH-CCEECCGGGTTTCCCSEEEECSCSCCBSTTHHHHC---CCSEECCSCSCCBSSHHHHHHHHHHTCEEC
T ss_pred ---------Hc-CCEEEChHHHhccCCcEeeccchHHHhCHHHHHhC---CCcEEEeCCCCCcccHHHHHHHHhCCCEEe
Confidence 12 45677777889999999999999999999999998 99999999999987 499999999999999
Q ss_pred ccccccccCceeeecccccccccCCCCHHHHHhhhc
Q 007820 552 PAMAAGAGGVVAGELELNQECNMVHWSPEDFESKLQ 587 (588)
Q Consensus 552 PD~laNAGGVivS~~E~~qN~~~~~ws~eeV~~~L~ 587 (588)
||+++|||||++||+|| ++|++|+|+++|+
T Consensus 282 Pd~~~NaGGv~~s~~E~------~~~~~e~v~~~l~ 311 (364)
T 1leh_A 282 PDYVINAGGVINVADEL------YGYNRTRAMKRVD 311 (364)
T ss_dssp CHHHHTTHHHHHHHHGG------GCCCHHHHHHHHT
T ss_pred cceeecCCceEEEEEee------cCCCHHHHHHHHH
Confidence 99999999999999999 6899999999986
No 15
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.82 E-value=3.1e-05 Score=80.38 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=82.1
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC-------CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY-------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~-------GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
+-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++...++++ +|.+++ ...+...+.+..+ .
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~-idl~~~---~~~~~~~g~~~~~-------~ 71 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN-LDISSI---ISNKEKTGRISDR-------A 71 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS-CCHHHH---HHHHHHHSCSCSS-------B
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc-cCHHHH---HHHhhhcCCCCcc-------c
Confidence 346899999999999999999873 579999999999999998 998764 2222222322211 1
Q ss_pred EeCCCCcc-ccccceeecCCCcCccc---hhhHHhhhhcCCeEEEecCCC-CCCHHHH---HHHHHCCceEe
Q 007820 488 YYDEAKPW-NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNM-PCTPEAV---DVLKKANVLIA 551 (588)
Q Consensus 488 ~i~~~eil-~~dcDILIPcA~~n~It---~enA~~l~~~~akiVvEgAN~-P~T~eA~---~iL~~rGI~vi 551 (588)
+ +..+++ +.++||++.|+..+... .+.+...++.|..+|++ |- +++.+.. +.-+++|+.+.
T Consensus 72 ~-d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta--NK~~la~~~~eL~~lA~~~g~~~~ 140 (325)
T 3ing_A 72 F-SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA--NKSGLANKWHDIMDSANQNSKYIR 140 (325)
T ss_dssp C-CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred C-CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc--CchhHHHHHHHHHHHHHHcCCeEE
Confidence 1 334444 56899999999876332 25566667889999985 21 2333333 33356777543
No 16
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.75 E-value=0.00023 Score=75.76 Aligned_cols=120 Identities=16% Similarity=0.155 Sum_probs=86.1
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCC---CCHHHHHHHHHHhh
Q 007820 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDG---FDYMKISFLRDIKS 471 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdG---LDie~L~~L~~~k~ 471 (588)
|+-=+..++..+++-.|.++++.||+|.|.|.+|..+|+.|..+|++=|.+.|++|.|+.... |+..+.. +..
T Consensus 171 TasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~-~A~--- 246 (388)
T 1vl6_A 171 TAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLE-IAR--- 246 (388)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHH-HHH---
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHH-HHH---
Confidence 333344566666777788999999999999999999999999999976899999999997553 6653321 111
Q ss_pred ccCChhhhhhccCCceEeCCCCccc--cccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 472 QQRSLRDYSKTYARSKYYDEAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 472 ~~gsL~~y~~~~p~a~~i~~~eil~--~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
.... + .....+.+ ..+||||=++..+.+|++..+++. .+ .+|.+-||
T Consensus 247 ~~~~---~---------~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma-~~-pIIfalSN 295 (388)
T 1vl6_A 247 ITNP---E---------RLSGDLETALEGADFFIGVSRGNILKPEWIKKMS-RK-PVIFALAN 295 (388)
T ss_dssp TSCT---T---------CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSC-SS-CEEEECCS
T ss_pred hhhc---c---------CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcC-CC-CEEEEcCC
Confidence 1100 0 01112221 357999999989999999999883 23 39999999
No 17
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.52 E-value=0.00022 Score=75.73 Aligned_cols=156 Identities=15% Similarity=0.161 Sum_probs=97.8
Q ss_pred CCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHH
Q 007820 349 PSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIA 428 (588)
Q Consensus 349 pApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG 428 (588)
-....|++.-|+.++... |-. +|.-| | ....+++-.++..+..+.+.++.++.|+||.|+|+|++|
T Consensus 63 ~~~~~G~D~iD~~~~~~~-----gI~---v~n~p----g--~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG 128 (380)
T 2o4c_A 63 GTCTIGTDHLDLDYFAEA-----GIA---WSSAP----G--CNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVG 128 (380)
T ss_dssp EECSSCSTTBCHHHHHHH-----TCE---EECCT----T--TTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHH
T ss_pred EEcCcccchhhHHHHHhC-----CCE---EEeCC----C--cChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHH
Confidence 456677877777776432 211 11111 1 123466667777777777888999999999999999999
Q ss_pred HHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccccccceeecCC--
Q 007820 429 MHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA-- 506 (588)
Q Consensus 429 ~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA-- 506 (588)
+.+|+.|...|.+|++ .|. . .+. ... +..+.+.++++ .+|||++.|.
T Consensus 129 ~~vA~~l~~~G~~V~~-~d~-------~---~~~--------~~~-----------g~~~~~l~ell-~~aDvV~l~~Pl 177 (380)
T 2o4c_A 129 GRLVEVLRGLGWKVLV-CDP-------P---RQA--------REP-----------DGEFVSLERLL-AEADVISLHTPL 177 (380)
T ss_dssp HHHHHHHHHTTCEEEE-ECH-------H---HHH--------HST-----------TSCCCCHHHHH-HHCSEEEECCCC
T ss_pred HHHHHHHHHCCCEEEE-EcC-------C---hhh--------hcc-----------CcccCCHHHHH-HhCCEEEEeccC
Confidence 9999999999999754 332 1 000 000 11111111222 3789998876
Q ss_pred -------CcCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCceEe
Q 007820 507 -------SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVLIA 551 (588)
Q Consensus 507 -------~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~vi 551 (588)
+.+.|+.+....+ +.+ .+++..|.++ ++.+| .+.|++.+|..+
T Consensus 178 t~~g~~~T~~li~~~~l~~m-k~g-ailIN~sRG~vvd~~aL~~aL~~g~i~~A 229 (380)
T 2o4c_A 178 NRDGEHPTRHLLDEPRLAAL-RPG-TWLVNASRGAVVDNQALRRLLEGGADLEV 229 (380)
T ss_dssp CSSSSSCCTTSBCHHHHHTS-CTT-EEEEECSCGGGBCHHHHHHHHHTTCCEEE
T ss_pred ccccccchhhhcCHHHHhhC-CCC-cEEEECCCCcccCHHHHHHHHHhCCCceE
Confidence 5566776666665 223 4677777776 45544 477777777655
No 18
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.50 E-value=0.00074 Score=68.11 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=73.2
Q ss_pred HHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCC
Q 007820 406 ILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (588)
Q Consensus 406 ~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~ 485 (588)
++...+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+ .+++..+.+ . +
T Consensus 145 ~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~dr~----------~~~~~~~~~----~-----------g 198 (293)
T 3d4o_A 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVK-VGARE----------SDLLARIAE----M-----------G 198 (293)
T ss_dssp HHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEESS----------HHHHHHHHH----T-----------T
T ss_pred HHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEE-EEECC----------HHHHHHHHH----C-----------C
Confidence 44556789999999999999999999999999999854 55541 222211111 0 1
Q ss_pred ceEeCCCCc--cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEe
Q 007820 486 SKYYDEAKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (588)
Q Consensus 486 a~~i~~~ei--l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~vi 551 (588)
++.++.+++ +-..+||++-|...+.++.+....+ +.++ +|+.-|-+|..-+- +..+++|+.++
T Consensus 199 ~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l~~m-k~~~-~lin~ar~~~~~~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 199 MEPFHISKAAQELRDVDVCINTIPALVVTANVLAEM-PSHT-FVIDLASKPGGTDF-RYAEKRGIKAL 263 (293)
T ss_dssp SEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHHHHS-CTTC-EEEECSSTTCSBCH-HHHHHHTCEEE
T ss_pred CeecChhhHHHHhcCCCEEEECCChHHhCHHHHHhc-CCCC-EEEEecCCCCCCCH-HHHHHCCCEEE
Confidence 222211111 1247999999998888888765554 4455 45555544422122 55577788764
No 19
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.43 E-value=0.00054 Score=73.13 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=87.4
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCC--CCCHHHHHHHHHHhhc
Q 007820 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDED--GFDYMKISFLRDIKSQ 472 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~Iydpd--GLDie~L~~L~~~k~~ 472 (588)
|+-=+..++-.+++-.|.+++..||+|.|.|.+|.++|++|..+|++=|.+.|++|.|+... .|+..+. ....+..
T Consensus 167 Ta~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~--~fa~~~~ 244 (398)
T 2a9f_A 167 TAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHL--DIAKVTN 244 (398)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC-----CHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHH--HHhhccC
Confidence 34344445666677678899999999999999999999999999996689999999998743 4654321 0110000
Q ss_pred cCChhhhhhccCCceEeCCCCccc--cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC-C-CCHH
Q 007820 473 QRSLRDYSKTYARSKYYDEAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM-P-CTPE 538 (588)
Q Consensus 473 ~gsL~~y~~~~p~a~~i~~~eil~--~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~-P-~T~e 538 (588)
. + . ....+.+ ..+||||=++..+.+|++-.+++. .=.||.--||- | +|||
T Consensus 245 --~---~------~---~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma--~~pIIfalsNPt~E~~pe 298 (398)
T 2a9f_A 245 --R---E------F---KSGTLEDALEGADIFIGVSAPGVLKAEWISKMA--ARPVIFAMANPIPEIYPD 298 (398)
T ss_dssp --C---T------T---CCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSC--SSCEEEECCSSSCSSCHH
T ss_pred --c---c------c---chhhHHHHhccCCEEEecCCCCCCCHHHHHhhC--CCCEEEECCCCCccCCHH
Confidence 0 0 0 0111221 257999999999999999999983 56788888984 2 4554
No 20
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.42 E-value=0.00063 Score=73.87 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=63.7
Q ss_pred HHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
+..+..+.|++|.|.|+|+||+.+|+.|...|++|+ +.|. |.... +.. .. .+.+
T Consensus 239 Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Vi-v~d~----------dp~~a--~~A-~~------------~G~~ 292 (464)
T 3n58_A 239 RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVK-VTEV----------DPICA--LQA-AM------------DGFE 292 (464)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------SHHHH--HHH-HH------------TTCE
T ss_pred HhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEeC----------Ccchh--hHH-Hh------------cCce
Confidence 345789999999999999999999999999999964 5554 22111 111 00 1222
Q ss_pred EeCCCCccccccceeecCCC-cCccchhhHHhhhhcCCeEEEecCCCC
Q 007820 488 YYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMP 534 (588)
Q Consensus 488 ~i~~~eil~~dcDILIPcA~-~n~It~enA~~l~~~~akiVvEgAN~P 534 (588)
.++-++++ ..+||++.|+. .+.|+.+....+ +.+|- |+--+.+.
T Consensus 293 vv~LeElL-~~ADIVv~atgt~~lI~~e~l~~M-K~GAI-LINvGRgd 337 (464)
T 3n58_A 293 VVTLDDAA-STADIVVTTTGNKDVITIDHMRKM-KDMCI-VGNIGHFD 337 (464)
T ss_dssp ECCHHHHG-GGCSEEEECCSSSSSBCHHHHHHS-CTTEE-EEECSSST
T ss_pred eccHHHHH-hhCCEEEECCCCccccCHHHHhcC-CCCeE-EEEcCCCC
Confidence 22222222 37899999863 568888887776 44554 44555543
No 21
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.31 E-value=0.0012 Score=65.24 Aligned_cols=136 Identities=15% Similarity=0.015 Sum_probs=83.7
Q ss_pred HHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhcc
Q 007820 404 QLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTY 483 (588)
Q Consensus 404 ~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~ 483 (588)
..+|+..+.+++| +|.|.|+|++|+.+++.|.+.|++ |.|.|+ +.++...+.+ .+
T Consensus 105 ~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~-v~v~~r----------~~~~~~~l~~---------~~---- 159 (263)
T 2d5c_A 105 LEALKAGGIPLKG-PALVLGAGGAGRAVAFALREAGLE-VWVWNR----------TPQRALALAE---------EF---- 159 (263)
T ss_dssp HHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHTTCC-EEEECS----------SHHHHHHHHH---------HH----
T ss_pred HHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHCCCE-EEEEEC----------CHHHHHHHHH---------Hh----
Confidence 3335556778999 999999999999999999999996 677776 2233222221 11
Q ss_pred CCceEeCCCCccccccceeecCCCcCccch--h--hHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEecccccccc
Q 007820 484 ARSKYYDEAKPWNERCDVAFPCASQNEIDQ--S--DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAG 559 (588)
Q Consensus 484 p~a~~i~~~eil~~dcDILIPcA~~n~It~--e--nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAG 559 (588)
+..+-+..+. .++||+|-|........ . ....+ +.+ ++|++-+.+|...+-.+.++++|+.++|..-.-.+
T Consensus 160 -~~~~~~~~~~--~~~Divi~~tp~~~~~~~~~~l~~~~l-~~g-~~viD~~~~p~~t~l~~~a~~~g~~~v~g~~mlv~ 234 (263)
T 2d5c_A 160 -GLRAVPLEKA--REARLLVNATRVGLEDPSASPLPAELF-PEE-GAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAW 234 (263)
T ss_dssp -TCEECCGGGG--GGCSEEEECSSTTTTCTTCCSSCGGGS-CSS-SEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHH
T ss_pred -ccchhhHhhc--cCCCEEEEccCCCCCCCCCCCCCHHHc-CCC-CEEEEeecCCcccHHHHHHHHCcCEEECcHHHHHH
Confidence 1111111223 68999998887653210 1 12222 333 46778777674324667778899999988655555
Q ss_pred Cceeeecccc
Q 007820 560 GVVAGELELN 569 (588)
Q Consensus 560 GVivS~~E~~ 569 (588)
..+.++-.|.
T Consensus 235 q~~~a~~~w~ 244 (263)
T 2d5c_A 235 QGALAFRLWT 244 (263)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5444444454
No 22
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.16 E-value=0.0024 Score=64.48 Aligned_cols=120 Identities=12% Similarity=0.196 Sum_probs=74.4
Q ss_pred HHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
...+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|. +.+++..+.+ . +++
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~-~~d~----------~~~~~~~~~~----~-----------g~~ 202 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVK-VGAR----------SSAHLARITE----M-----------GLV 202 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEE-EEES----------SHHHHHHHHH----T-----------TCE
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEE-EEEC----------CHHHHHHHHH----C-----------CCe
Confidence 445779999999999999999999999999999854 5554 1222211111 0 111
Q ss_pred EeCCCCc--cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEe--ccccc
Q 007820 488 YYDEAKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA--PAMAA 556 (588)
Q Consensus 488 ~i~~~ei--l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~vi--PD~la 556 (588)
.++..++ +-..|||++-|...+.++.+....+ +.++ +|+.-|-+|..-+. +...++|+.++ |+.-.
T Consensus 203 ~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~~~~m-k~g~-~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g 272 (300)
T 2rir_A 203 PFHTDELKEHVKDIDICINTIPSMILNQTVLSSM-TPKT-LILDLASRPGGTDF-KYAEKQGIKALLAPGLPG 272 (300)
T ss_dssp EEEGGGHHHHSTTCSEEEECCSSCCBCHHHHTTS-CTTC-EEEECSSTTCSBCH-HHHHHHTCEEEECCCHHH
T ss_pred EEchhhHHHHhhCCCEEEECCChhhhCHHHHHhC-CCCC-EEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCC
Confidence 1111111 1248999999998888887655444 3444 55555555532222 45667898765 65433
No 23
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.09 E-value=0.0022 Score=69.28 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=69.2
Q ss_pred HHHHHHHHHHH-HHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 397 YGLVFFAQLIL-ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 397 ~GV~~~i~~~l-~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
||+...+-..+ +..+..+.|++|+|.|+|++|+.+|+.|...|++| .+.|. |.... +.. ...
T Consensus 200 yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~V-iv~D~----------dp~ra--~~A-~~~--- 262 (435)
T 3gvp_A 200 YCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIV-YVTEI----------DPICA--LQA-CMD--- 262 (435)
T ss_dssp HHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHH--HHH-HHT---
T ss_pred hhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEE-EEEeC----------Chhhh--HHH-HHc---
Confidence 45444443333 33578899999999999999999999999999995 45665 22111 111 100
Q ss_pred hhhhhhccCCceEeCCCCccccccceeecCCC-cCccchhhHHhhhhcCCeEEEecCCCCC
Q 007820 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMPC 535 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil~~dcDILIPcA~-~n~It~enA~~l~~~~akiVvEgAN~P~ 535 (588)
+.+..+-++++ ..+||++.|+- .+.|+.+....+ +.++ +|+.-++++.
T Consensus 263 ---------G~~v~~Leeal-~~ADIVi~atgt~~lI~~e~l~~M-K~ga-ilINvgrg~~ 311 (435)
T 3gvp_A 263 ---------GFRLVKLNEVI-RQVDIVITCTGNKNVVTREHLDRM-KNSC-IVCNMGHSNT 311 (435)
T ss_dssp ---------TCEECCHHHHT-TTCSEEEECSSCSCSBCHHHHHHS-CTTE-EEEECSSTTT
T ss_pred ---------CCEeccHHHHH-hcCCEEEECCCCcccCCHHHHHhc-CCCc-EEEEecCCCc
Confidence 11111111122 37899999853 578888887776 4454 6666777654
No 24
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.02 E-value=0.0012 Score=68.56 Aligned_cols=118 Identities=15% Similarity=0.205 Sum_probs=76.1
Q ss_pred cEEEEeccchHHHHHHHHHHHC---------CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---------GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
.+|+|.|+|+||+..++.|.+. +.+|++|+|++....++ +|..+. ...+...+.+ +.
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~--id~~~~---~~~~~~~~~~------~~--- 68 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD--FSLVEA---LRMKRETGML------RD--- 68 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS--CCHHHH---HHHHHHHSSC------SB---
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc--cCHHHH---HhhhccCccc------cC---
Confidence 4899999999999999998764 78999999999888887 776553 1111111111 00
Q ss_pred EeCCCCcc-ccccceeecCCCcCccc---hhhHHhhhhcCCeEEEe--cCCCCCCH---HHHHHHHHCCceEe
Q 007820 488 YYDEAKPW-NERCDVAFPCASQNEID---QSDAINLVNSGCRILVE--GSNMPCTP---EAVDVLKKANVLIA 551 (588)
Q Consensus 488 ~i~~~eil-~~dcDILIPcA~~n~It---~enA~~l~~~~akiVvE--gAN~P~T~---eA~~iL~~rGI~vi 551 (588)
..+.++++ +.++|+++.|+..+.-+ .+.+...++.|..+|+| + |++. +-.+..+++|+.+.
T Consensus 69 ~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKk---pla~~~~eL~~~A~~~g~~~~ 138 (327)
T 3do5_A 69 DAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKG---PLVAEFHGLMSLAERNGVRLM 138 (327)
T ss_dssp CCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSH---HHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCch---hhHHHHHHHHHHHHhhCCcEE
Confidence 01112344 45899999999755322 34556666789999998 4 3332 33345567888554
No 25
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.01 E-value=0.0025 Score=68.79 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=67.2
Q ss_pred HHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
+..+..+.|++|+|.|+|++|+.+|+.|...|++|+ +.|. + .... ..... .+.+
T Consensus 203 ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Vi-v~D~-------~---p~~a---~~A~~------------~G~~ 256 (436)
T 3h9u_A 203 RATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVV-VTEV-------D---PINA---LQAAM------------EGYQ 256 (436)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-------C---HHHH---HHHHH------------TTCE
T ss_pred HhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECC-------C---hhhh---HHHHH------------hCCe
Confidence 445889999999999999999999999999999954 5655 2 2221 01110 0122
Q ss_pred EeCCCCccccccceeecCCC-cCccchhhHHhhhhcCCeEEEecCCCC--CCHHHH
Q 007820 488 YYDEAKPWNERCDVAFPCAS-QNEIDQSDAINLVNSGCRILVEGSNMP--CTPEAV 540 (588)
Q Consensus 488 ~i~~~eil~~dcDILIPcA~-~n~It~enA~~l~~~~akiVvEgAN~P--~T~eA~ 540 (588)
..+-++++ ..+||++-|.- .+.|+.+....+ +.+ .+|+.-|+++ +.+++.
T Consensus 257 ~~sL~eal-~~ADVVilt~gt~~iI~~e~l~~M-K~g-AIVINvgRg~vEID~~~L 309 (436)
T 3h9u_A 257 VLLVEDVV-EEAHIFVTTTGNDDIITSEHFPRM-RDD-AIVCNIGHFDTEIQVAWL 309 (436)
T ss_dssp ECCHHHHT-TTCSEEEECSSCSCSBCTTTGGGC-CTT-EEEEECSSSGGGBCHHHH
T ss_pred ecCHHHHH-hhCCEEEECCCCcCccCHHHHhhc-CCC-cEEEEeCCCCCccCHHHH
Confidence 22212222 36899997654 478898887776 344 4666777775 455443
No 26
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=96.96 E-value=0.0027 Score=70.17 Aligned_cols=177 Identities=15% Similarity=0.139 Sum_probs=129.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHH
Q 007820 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (588)
Q Consensus 322 ~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (588)
.+-+|...|...||..+.+..||..-|-=.|++. ..--.|-+.|+.- -.++ .+--.-||-=++.
T Consensus 204 v~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~--~~af~il~ryr~~----ipvF----------nDDiqGTa~V~lA 267 (555)
T 1gq2_A 204 IRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFAN--ANAFRLLHKYRNK----YCTF----------NDDIQGTASVAVA 267 (555)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT----SEEE----------ETTTHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhhCCCcEEeecccCC--ccHHHHHHHHhcc----CCEe----------cCccchHHHHHHH
Confidence 4567888999999999998889988888889864 3445567777651 1122 2223457777778
Q ss_pred HHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHH----CCC------eEEEEEcCCCeeeCC-CCCCHHHHHHHHHHh
Q 007820 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDE-DGFDYMKISFLRDIK 470 (588)
Q Consensus 402 ~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e----~GA------KVVaVSDs~G~Iydp-dGLDie~L~~L~~~k 470 (588)
++..+++-.|.+|+..||+|.|.|..|.++|++|.. .|. +=|.+.|++|.|++. ++|+..+.
T Consensus 268 gllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~------- 340 (555)
T 1gq2_A 268 GLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKE------- 340 (555)
T ss_dssp HHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGG-------
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHH-------
Confidence 889999999999999999999999999999999987 784 447899999999974 34554321
Q ss_pred hccCChhhhhhccCCceEeCCCCcc----ccccceeecCCC-cCccchhhHHhhhh-cCCeEEEecCCC
Q 007820 471 SQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSNM 533 (588)
Q Consensus 471 ~~~gsL~~y~~~~p~a~~i~~~eil----~~dcDILIPcA~-~n~It~enA~~l~~-~~akiVvEgAN~ 533 (588)
.|+.... ....+. .+++||||-++. .+.+|++..+.+.+ +.=.||---||-
T Consensus 341 -------~~A~~~~-----~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 397 (555)
T 1gq2_A 341 -------HFAHEHC-----EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNP 397 (555)
T ss_dssp -------GGCBSCC-----CCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred -------HHHhhcC-----CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 2211100 001222 247999999997 69999999999854 356788888883
No 27
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.95 E-value=0.0031 Score=63.00 Aligned_cols=143 Identities=13% Similarity=0.056 Sum_probs=88.7
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc
Q 007820 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (588)
Q Consensus 394 ATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~ 473 (588)
-++.|+..+++ ..+.+++|++|+|.|.|++|+.+|..|.+.|++ |.|.|+ +.+++. +....
T Consensus 111 Td~~G~~~~l~----~~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~-V~v~~r----------~~~~~~---~l~~~- 171 (275)
T 2hk9_A 111 TDWIGFLKSLK----SLIPEVKEKSILVLGAGGASRAVIYALVKEGAK-VFLWNR----------TKEKAI---KLAQK- 171 (275)
T ss_dssp CHHHHHHHHHH----HHCTTGGGSEEEEECCSHHHHHHHHHHHHHTCE-EEEECS----------SHHHHH---HHTTT-
T ss_pred CCHHHHHHHHH----HhCCCcCCCEEEEECchHHHHHHHHHHHHcCCE-EEEEEC----------CHHHHH---HHHHH-
Confidence 35777776664 457789999999999999999999999999995 677766 233321 11111
Q ss_pred CChhhhhhccCCceEeCC-CCccccccceeecCCCcCccch--hh--HHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCc
Q 007820 474 RSLRDYSKTYARSKYYDE-AKPWNERCDVAFPCASQNEIDQ--SD--AINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (588)
Q Consensus 474 gsL~~y~~~~p~a~~i~~-~eil~~dcDILIPcA~~n~It~--en--A~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (588)
+ +....+. .+.+ .++||+|-|........ +. ...+ + .-.+|++-+. ..|+ -.+..+++|+
T Consensus 172 ---------~-g~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i~~~~l-~-~g~~viDv~~-~~t~-ll~~a~~~g~ 236 (275)
T 2hk9_A 172 ---------F-PLEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIFNYDLI-K-KDHVVVDIIY-KETK-LLKKAKEKGA 236 (275)
T ss_dssp ---------S-CEEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSSCGGGC-C-TTSEEEESSS-SCCH-HHHHHHHTTC
T ss_pred ---------c-CCeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCCCHHHc-C-CCCEEEEcCC-ChHH-HHHHHHHCcC
Confidence 1 1222211 1222 48999998877554211 11 1222 2 2357778777 4444 3455678999
Q ss_pred eEeccccccccCceeeeccccc
Q 007820 549 LIAPAMAAGAGGVVAGELELNQ 570 (588)
Q Consensus 549 ~viPD~laNAGGVivS~~E~~q 570 (588)
.++|..-.-.+.-+.++..|..
T Consensus 237 ~~v~g~~mlv~q~~~a~~~w~g 258 (275)
T 2hk9_A 237 KLLDGLPMLLWQGIEAFKIWNG 258 (275)
T ss_dssp EEECSHHHHHHHHHHHHHHHHC
T ss_pred EEECCHHHHHHHHHHHHHHHHC
Confidence 9999866666665555555653
No 28
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.88 E-value=0.0029 Score=67.26 Aligned_cols=123 Identities=15% Similarity=0.123 Sum_probs=74.8
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc
Q 007820 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (588)
Q Consensus 394 ATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~ 473 (588)
+++--++..+-.+.+..+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |. .. . ....
T Consensus 97 ~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~-d~------------~~-----~-~~~~ 157 (381)
T 3oet_A 97 AVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLC-DP------------PR-----A-ARGD 157 (381)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEE-CH------------HH-----H-HTTC
T ss_pred hhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEE-CC------------Ch-----H-Hhcc
Confidence 3444444445555667789999999999999999999999999999997654 32 00 0 0000
Q ss_pred CChhhhhhccCCceEeCCCCccccccceeecCC---------CcCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHH
Q 007820 474 RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCA---------SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDV 542 (588)
Q Consensus 474 gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA---------~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~i 542 (588)
+..+.+.+++ -..|||++-|. +.+.|+.+....+ +. -.+++.-|-++ +..+| .+.
T Consensus 158 -----------~~~~~sl~el-l~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~m-k~-gailIN~aRG~vvde~aL~~a 223 (381)
T 3oet_A 158 -----------EGDFRTLDEL-VQEADVLTFHTPLYKDGPYKTLHLADETLIRRL-KP-GAILINACRGPVVDNAALLAR 223 (381)
T ss_dssp -----------CSCBCCHHHH-HHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHS-CT-TEEEEECSCGGGBCHHHHHHH
T ss_pred -----------CcccCCHHHH-HhhCCEEEEcCcCCccccccchhhcCHHHHhcC-CC-CcEEEECCCCcccCHHHHHHH
Confidence 0011111111 13678876554 5566776666555 22 34666777765 44444 466
Q ss_pred HHHCCce
Q 007820 543 LKKANVL 549 (588)
Q Consensus 543 L~~rGI~ 549 (588)
|++.+|.
T Consensus 224 L~~g~i~ 230 (381)
T 3oet_A 224 LNAGQPL 230 (381)
T ss_dssp HHTTCCE
T ss_pred HHhCCCe
Confidence 6666654
No 29
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.87 E-value=0.012 Score=59.42 Aligned_cols=130 Identities=18% Similarity=0.182 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|+|.+.+ +|+..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.++ +.++...+.+.... +
T Consensus 103 ~~G~~~~---lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~~~-~- 167 (272)
T 3pwz_A 103 GIGLLRD---IEENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANR----------DMAKALALRNELDH-S- 167 (272)
T ss_dssp HHHHHHH---HHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECS----------CHHHHHHHHHHHCC-T-
T ss_pred HHHHHHH---HHHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHHHHHhcc-C-
Confidence 5565544 2455678899999999999999999999999999744677776 23443333321111 0
Q ss_pred hhhhhhccCCceEeCCCCccccccceeecCCCcCccch---hhHHhhhhcCCeEEEecCCCCC-CHHHHHHHHHCCce-E
Q 007820 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL-I 550 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~---enA~~l~~~~akiVvEgAN~P~-T~eA~~iL~~rGI~-v 550 (588)
....++-+++-..++||+|-|+.-..-.. -+...+ ....+|++-.-+|. |+ -.+..+++|+. +
T Consensus 168 ---------~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l--~~~~~V~DlvY~P~~T~-ll~~A~~~G~~~~ 235 (272)
T 3pwz_A 168 ---------RLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVL--GEAALAYELAYGKGLTP-FLRLAREQGQARL 235 (272)
T ss_dssp ---------TEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGG--TTCSEEEESSCSCCSCH-HHHHHHHHSCCEE
T ss_pred ---------CeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHh--CcCCEEEEeecCCCCCH-HHHHHHHCCCCEE
Confidence 11222222222268999998765432111 012223 25578899988884 55 44556778875 5
Q ss_pred ec
Q 007820 551 AP 552 (588)
Q Consensus 551 iP 552 (588)
+.
T Consensus 236 ~~ 237 (272)
T 3pwz_A 236 AD 237 (272)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 30
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.87 E-value=0.0098 Score=61.37 Aligned_cols=53 Identities=26% Similarity=0.374 Sum_probs=45.3
Q ss_pred CCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 391 r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
-...|.+|++. +|++.+.+++|++|+|.|.|+ ||..+|..|...|+. |+|+++
T Consensus 144 ~~PcTp~gv~~----lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~~~ 197 (300)
T 4a26_A 144 FTPCTAKGVIV----LLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENAT-VTIVHS 197 (300)
T ss_dssp CCCHHHHHHHH----HHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCCHHHHHH----HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeC
Confidence 34689999764 556678899999999999887 899999999999998 678876
No 31
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.85 E-value=0.0024 Score=66.81 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=68.2
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~- 490 (588)
.++.|+||.|+|+|++|+.+|+.|...|.+|++ .|.+ ++ . .. .. .+ +++...
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d~~-----~~--~--~~---~~---------~~-----g~~~~~~ 216 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLF-YDPY-----LS--D--GV---ER---------AL-----GLQRVST 216 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-ECTT-----SC--T--TH---HH---------HH-----TCEECSS
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-ECCC-----cc--h--hh---Hh---------hc-----CCeecCC
Confidence 589999999999999999999999999999754 4431 11 0 10 00 00 222221
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.++++ ..|||++.|.. .+.|+.+....+ +.++ +++.-|.++ ++.+| .+.|++.+|.
T Consensus 217 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 217 LQDLL-FHSDCVTLHCGLNEHNHHLINDFTVKQM-RQGA-FLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp HHHHH-HHCSEEEECCCCCTTCTTSBSHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hcCCEEEEcCCCCHHHHHHhHHHHHhcC-CCCC-EEEECCCChHHhHHHHHHHHHhCCCc
Confidence 12222 37899887653 456776655554 3344 566666665 55554 5788888776
No 32
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=96.84 E-value=0.0032 Score=70.06 Aligned_cols=176 Identities=12% Similarity=0.147 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHH
Q 007820 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (588)
Q Consensus 322 ~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (588)
.+-+|...|...||..+.+..||..-|-=.|++. ..--.|-+.|+.- -.++. +--.-||-=++.
T Consensus 242 v~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~--p~af~il~ryr~~----ipvFn----------DDiqGTA~V~lA 305 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFAN--PNAFRLLDKYQDK----YTMFN----------DDIQGTASVIVA 305 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT----SEEEE----------HHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCC--ccHHHHHHHhccC----CCeeC----------cccchHHHHHHH
Confidence 4567888899999999998889988888889864 3445566777651 11221 112346777778
Q ss_pred HHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHH----CCC------eEEEEEcCCCeeeCC-CCCCHHHHHHHHHHh
Q 007820 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDE-DGFDYMKISFLRDIK 470 (588)
Q Consensus 402 ~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e----~GA------KVVaVSDs~G~Iydp-dGLDie~L~~L~~~k 470 (588)
++..+++-.|.+|+..||+|.|.|..|.++|++|.. .|. +=|-+.|++|.|+.. ++|+..+.
T Consensus 306 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~------- 378 (605)
T 1o0s_A 306 GLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHV------- 378 (605)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGT-------
T ss_pred HHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHH-------
Confidence 888999999999999999999999999999999987 785 457899999999974 34554321
Q ss_pred hccCChhhhhhccCCceEeCCCCcc----ccccceeecCCC-cCccchhhHHhhhh-cCCeEEEecCC
Q 007820 471 SQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSN 532 (588)
Q Consensus 471 ~~~gsL~~y~~~~p~a~~i~~~eil----~~dcDILIPcA~-~n~It~enA~~l~~-~~akiVvEgAN 532 (588)
.|+.... ....+. .+++||||-++. .+.+|++..+.+.+ +.-.||---||
T Consensus 379 -------~~A~~~~-----~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 434 (605)
T 1o0s_A 379 -------QFAKDMP-----ETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSN 434 (605)
T ss_dssp -------TTCBSSC-----CCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred -------HHHhhcC-----CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 2211100 001222 247999999997 69999999999854 35678888888
No 33
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.83 E-value=0.012 Score=59.81 Aligned_cols=129 Identities=18% Similarity=0.137 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|+|.+.++ +..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.++ +.++...+.+.....+
T Consensus 110 ~~G~~~~L----~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R----------~~~~a~~la~~~~~~~- 174 (281)
T 3o8q_A 110 GEGLVQDL----LAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNR----------TFAKAEQLAELVAAYG- 174 (281)
T ss_dssp HHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEES----------SHHHHHHHHHHHGGGS-
T ss_pred HHHHHHHH----HHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEEC----------CHHHHHHHHHHhhccC-
Confidence 66766554 45678899999999999999999999999999744677776 2344333332211111
Q ss_pred hhhhhhccCCceEeCCCCccccccceeecCCCcCccchh---hHHhhhhcCCeEEEecCCCC-CCHHHHHHHHHCCce-E
Q 007820 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANVL-I 550 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~e---nA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~rGI~-v 550 (588)
.....+.+++ ..++||+|-|+.-...... +...+ ....+|++-.-.| .|+- .+..+++|+. +
T Consensus 175 ---------~~~~~~~~~l-~~~aDiIInaTp~gm~~~~~~l~~~~l--~~~~~V~DlvY~P~~T~l-l~~A~~~G~~~~ 241 (281)
T 3o8q_A 175 ---------EVKAQAFEQL-KQSYDVIINSTSASLDGELPAIDPVIF--SSRSVCYDMMYGKGYTVF-NQWARQHGCAQA 241 (281)
T ss_dssp ---------CEEEEEGGGC-CSCEEEEEECSCCCC----CSCCGGGE--EEEEEEEESCCCSSCCHH-HHHHHHTTCSEE
T ss_pred ---------CeeEeeHHHh-cCCCCEEEEcCcCCCCCCCCCCCHHHh--CcCCEEEEecCCCccCHH-HHHHHHCCCCEE
Confidence 1122221222 2589999987765432111 12223 1456889988778 4653 3567888876 5
Q ss_pred ec
Q 007820 551 AP 552 (588)
Q Consensus 551 iP 552 (588)
+.
T Consensus 242 ~~ 243 (281)
T 3o8q_A 242 ID 243 (281)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 34
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.80 E-value=0.0014 Score=68.05 Aligned_cols=108 Identities=17% Similarity=0.186 Sum_probs=68.6
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.+|.|+||.|.|+|++|+.+|+.|...|.+|++. |. .. + .. .. . .++++.+
T Consensus 136 ~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~-d~-------~~-~--~~---~~--~------------~g~~~~~ 187 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY-DV-------VK-R--ED---LK--E------------KGCVYTS 187 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS-------SC-C--HH---HH--H------------TTCEECC
T ss_pred ceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEE-CC-------Cc-c--hh---hH--h------------cCceecC
Confidence 45789999999999999999999999999997543 33 22 1 10 00 0 0222222
Q ss_pred CCCccccccceeecCC-----CcCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCA-----SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA-----~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.++++ ..|||++-|. +.+.|+.+....+ +.+ .+++.-|-++ +..+| .+.|++.+|.
T Consensus 188 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~g-ailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 188 LDELL-KESDVISLHVPYTKETHHMINEERISLM-KDG-VYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTT-EEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHH-hhCCEEEEeCCCChHHHHhhCHHHHhhC-CCC-cEEEECCCCcccCHHHHHHHHHhCCce
Confidence 12222 3789988764 4467777776666 333 4667777765 55554 4677666654
No 35
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.80 E-value=0.017 Score=57.52 Aligned_cols=132 Identities=15% Similarity=0.112 Sum_probs=79.3
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccC
Q 007820 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~g 474 (588)
.+.|++..+++ .+.+++|++|+|.|.|.+|+.++..|.+.|++ |.|.++ +.+++..+.+.....+
T Consensus 102 D~~G~~~~L~~----~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~-V~v~~R----------~~~~~~~la~~~~~~~ 166 (271)
T 1nyt_A 102 DGVGLLSDLER----LSFIRPGLRILLIGAGGASRGVLLPLLSLDCA-VTITNR----------TVSRAEELAKLFAHTG 166 (271)
T ss_dssp HHHHHHHHHHH----HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS----------SHHHHHHHHHHTGGGS
T ss_pred CHHHHHHHHHh----cCcCcCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEEC----------CHHHHHHHHHHhhccC
Confidence 47787776643 57789999999999999999999999999987 566666 3344332332111100
Q ss_pred ChhhhhhccCCceEeCCCCccccccceeecCCCcCccch--hhHHhhhhcCCeEEEecCCCCC-CHHHHHHHHHCCce-E
Q 007820 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ--SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKANVL-I 550 (588)
Q Consensus 475 sL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~--enA~~l~~~~akiVvEgAN~P~-T~eA~~iL~~rGI~-v 550 (588)
. ....+.+++-...+||+|-|+.-..... .-...++. ...+|++-.-.|. |+ -.+..+++|+. +
T Consensus 167 ~----------~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~-~~~~v~D~~y~p~~t~-~~~~a~~~G~~~~ 234 (271)
T 1nyt_A 167 S----------IQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIH-PGIYCYDMFYQKGKTP-FLAWCEQRGSKRN 234 (271)
T ss_dssp S----------EEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCC-TTCEEEESCCCSSCCH-HHHHHHHTTCCEE
T ss_pred C----------eeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcC-CCCEEEEeccCCcCCH-HHHHHHHcCCCee
Confidence 1 1111111111147999999887543210 00011112 3468888887784 54 44667889987 5
Q ss_pred ecc
Q 007820 551 APA 553 (588)
Q Consensus 551 iPD 553 (588)
+++
T Consensus 235 ~~G 237 (271)
T 1nyt_A 235 ADG 237 (271)
T ss_dssp ECT
T ss_pred cCC
Confidence 544
No 36
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=96.78 E-value=0.0035 Score=69.38 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHH
Q 007820 322 KSDNEIMRFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVF 401 (588)
Q Consensus 322 ~S~~El~R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~ 401 (588)
.+-+|...|...||..+.+..||..-|-=.|++. ..--.|-+.|+.- -.++. +--.-||-=++.
T Consensus 206 v~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~--~~af~il~ryr~~----ipvFn----------DDiqGTa~V~lA 269 (564)
T 1pj3_A 206 DRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGN--HNAFRFLRKYREK----YCTFN----------DDIQGTAAVALA 269 (564)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCH--HHHHHHHHHHTTT----SSEEE----------HHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCC--ccHHHHHHHhccC----CCEeC----------CCCchHHHHHHH
Confidence 4567888999999999998889988788889864 4445567777651 11221 112346777777
Q ss_pred HHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHH----CCC------eEEEEEcCCCeeeCCC--CCCHHHHHHHHHH
Q 007820 402 FAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIA----YGA------IPVSVSDAKGYLVDED--GFDYMKISFLRDI 469 (588)
Q Consensus 402 ~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e----~GA------KVVaVSDs~G~Iydpd--GLDie~L~~L~~~ 469 (588)
++-.+++-.|.+|+..||+|.|.|..|.++|++|.. .|. +=+-+.|++|.|++.. +|+..+.
T Consensus 270 gllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~------ 343 (564)
T 1pj3_A 270 GLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQE------ 343 (564)
T ss_dssp HHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTG------
T ss_pred HHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHH------
Confidence 888999999999999999999999999999999986 784 4478999999999853 5654331
Q ss_pred hhccCChhhhhhccCCceEeCCCCcc----ccccceeecCCC-cCccchhhHHhhhh-cCCeEEEecCCC
Q 007820 470 KSQQRSLRDYSKTYARSKYYDEAKPW----NERCDVAFPCAS-QNEIDQSDAINLVN-SGCRILVEGSNM 533 (588)
Q Consensus 470 k~~~gsL~~y~~~~p~a~~i~~~eil----~~dcDILIPcA~-~n~It~enA~~l~~-~~akiVvEgAN~ 533 (588)
.|+..... .....+. .+++||||-++. .+.+|++..+.+.+ +.=.||---||-
T Consensus 344 --------~~A~~~~~---~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNP 402 (564)
T 1pj3_A 344 --------PFTHSAPE---SIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNP 402 (564)
T ss_dssp --------GGCBCCCS---SCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSS
T ss_pred --------HHHHhcCc---cccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCC
Confidence 22111000 0001222 247999999997 69999999999853 346788888883
No 37
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.76 E-value=0.0032 Score=65.13 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=65.7
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|++|++ .|.+.. +. + ..+ +.+.+
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~~~~---~~-~------------------~~~------~~~~~ 191 (331)
T 1xdw_A 141 SKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIG-EDVFEI---KG-I------------------EDY------CTQVS 191 (331)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSCC---CS-C------------------TTT------CEECC
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECCCcc---HH-H------------------Hhc------cccCC
Confidence 3578999999999999999999999999999754 444210 00 0 000 11111
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-+-++ +..+| .+.|++.+|.
T Consensus 192 l~ell-~~aDvV~~~~p~t~~t~~li~~~~l~~m-k~ga-~lin~srg~~vd~~aL~~aL~~g~i~ 254 (331)
T 1xdw_A 192 LDEVL-EKSDIITIHAPYIKENGAVVTRDFLKKM-KDGA-ILVNCARGQLVDTEAVIEAVESGKLG 254 (331)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTCCSBCHHHHHTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hhCCEEEEecCCchHHHHHhCHHHHhhC-CCCc-EEEECCCcccccHHHHHHHHHhCCce
Confidence 11122 37888887643 466766665555 3344 555555554 55554 4777777765
No 38
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.73 E-value=0.015 Score=59.73 Aligned_cols=52 Identities=25% Similarity=0.363 Sum_probs=44.0
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
...|..|++. +|++.+.+++|++|+|.|.|+ ||..+|.+|...|++ |+++++
T Consensus 139 ~PcTp~gi~~----ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 191 (288)
T 1b0a_A 139 RPCTPRGIVT----LLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCT-TTVTHR 191 (288)
T ss_dssp CCHHHHHHHH----HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCE-EEEECS
T ss_pred CCCcHHHHHH----HHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCe-EEEEeC
Confidence 4588888654 455678899999999999997 799999999999999 677775
No 39
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.70 E-value=0.0039 Score=65.44 Aligned_cols=110 Identities=16% Similarity=0.260 Sum_probs=68.9
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCe-EEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAI-PVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAK-VVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
+.++.|+||.|+|+|++|+.+|+.|...|++ |++ .|. .....+.. .+ .++...
T Consensus 159 ~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~-~d~-------~~~~~~~~---~~---------------~g~~~~ 212 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLY-YDY-------QALPKDAE---EK---------------VGARRV 212 (364)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEE-ECS-------SCCCHHHH---HH---------------TTEEEC
T ss_pred cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEE-ECC-------CccchhHH---Hh---------------cCcEec
Confidence 5689999999999999999999999999997 754 333 22222211 00 022222
Q ss_pred CC-CCccccccceeecCCCc-----CccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 490 DE-AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 490 ~~-~eil~~dcDILIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
+. ++++ ..|||++.|... +.|+.+....+ +.++ +|+.-|.++ +..+| .+.|++.+|.
T Consensus 213 ~~l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 213 ENIEELV-AQADIVTVNAPLHAGTKGLINKELLSKF-KKGA-WLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp SSHHHHH-HTCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCHHHHH-hcCCEEEECCCCChHHHHHhCHHHHhhC-CCCC-EEEECCCCchhCHHHHHHHHHcCCCc
Confidence 11 1222 378999888655 56665554444 3344 556666665 55554 5778887765
No 40
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.69 E-value=0.0085 Score=62.78 Aligned_cols=111 Identities=16% Similarity=0.244 Sum_probs=72.4
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ . |+...+.+.. .+ . ++++++
T Consensus 159 ~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~-~-------dr~~~~~~~~---~~----------~-----g~~~~~ 212 (351)
T 3jtm_A 159 AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLY-H-------DRLQMAPELE---KE----------T-----GAKFVE 212 (351)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEE-E-------CSSCCCHHHH---HH----------H-----CCEECS
T ss_pred cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEE-e-------CCCccCHHHH---Hh----------C-----CCeEcC
Confidence 5689999999999999999999999999999653 3 3333333321 11 0 222222
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.-+-+-..|||++-|.. .+.|+.+....+ +. =.+|+.-|.++ +..+| .+.|++.+|.
T Consensus 213 ~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~-gailIN~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 213 DLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKL-KK-GVLIVNNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp CHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHS-CT-TEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcC-CC-CCEEEECcCchhhCHHHHHHHHHhCCcc
Confidence 11112247899987654 457777776666 33 35777778776 55554 4778887765
No 41
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.68 E-value=0.037 Score=55.93 Aligned_cols=131 Identities=12% Similarity=0.146 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|.|.+.+ |+..+.++++++++|.|.|-.++.++-.|.+.|++-|.|.++ +.++...|.+...
T Consensus 109 ~~Gf~~~----L~~~g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------t~~ra~~la~~~~---- 170 (269)
T 3tum_A 109 GAGFLGA----AHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------STARMGAVCELLG---- 170 (269)
T ss_dssp HHHHHHH----HHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------CHHHHHHHHHHHH----
T ss_pred hHHHHHH----HHHhCCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------CHHHHHHHHHHHh----
Confidence 5565544 455688999999999999999999999999999887888876 4445433433211
Q ss_pred hhhhhhccCCceEeCCCCccccccceeecCCCcCc-------cchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCc
Q 007820 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNE-------IDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~-------It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (588)
..++........+ ...++|++|-|+.-.. ++......+ ....+|.+-.-+|..-.-.+.-+++|.
T Consensus 171 -----~~~~~~~~~~~~~-~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l--~~~~~v~D~vY~P~~T~ll~~A~~~G~ 242 (269)
T 3tum_A 171 -----NGFPGLTVSTQFS-GLEDFDLVANASPVGMGTRAELPLSAALLATL--QPDTLVADVVTSPEITPLLNRARQVGC 242 (269)
T ss_dssp -----HHCTTCEEESCCS-CSTTCSEEEECSSTTCSTTCCCSSCHHHHHTC--CTTSEEEECCCSSSSCHHHHHHHHHTC
T ss_pred -----ccCCcceehhhhh-hhhcccccccCCccccCCCCCCCCChHHHhcc--CCCcEEEEEccCCCCCHHHHHHHHCcC
Confidence 1123222221111 1247899999876432 222222223 234688899988853333444566776
Q ss_pred eEec
Q 007820 549 LIAP 552 (588)
Q Consensus 549 ~viP 552 (588)
.+++
T Consensus 243 ~~~~ 246 (269)
T 3tum_A 243 RIQT 246 (269)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6554
No 42
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=96.68 E-value=0.003 Score=65.53 Aligned_cols=110 Identities=14% Similarity=0.178 Sum_probs=69.5
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|. ...+.+.. .. + ++++.+
T Consensus 140 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d~-------~~~~~~~~---~~----------~-----g~~~~~ 193 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAIGLAMADRLQGWGATLQY-HEA-------KALDTQTE---QR----------L-----GLRQVA 193 (330)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEE-ECS-------SCCCHHHH---HH----------H-----TEEECC
T ss_pred CCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECC-------CCCcHhHH---Hh----------c-----CceeCC
Confidence 4578999999999999999999999999999754 343 33232221 11 0 222222
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.++++ ..|||++-|.. .+.|+.+....+ +.+ .+|+.-|.++ +..+| .+.|++.+|.
T Consensus 194 l~ell-~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~g-ailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 194 CSELF-ASSDFILLALPLNADTLHLVNAELLALV-RPG-ALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp HHHHH-HHCSEEEECCCCSTTTTTCBCHHHHTTS-CTT-EEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHHH-hhCCEEEEcCCCCHHHHHHhCHHHHhhC-CCC-cEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 12222 36899887754 456766665555 223 4677777775 45444 4778777765
No 43
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=96.65 E-value=0.005 Score=63.18 Aligned_cols=108 Identities=22% Similarity=0.164 Sum_probs=65.5
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|++|+ +.|. +++ ... .. .+ ++.+.+
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~-----~~~---~~~---~~----------~~-----g~~~~~ 189 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRIGTKVGIIANAMGMKVL-AYDI-----LDI---REK---AE----------KI-----NAKAVS 189 (313)
T ss_dssp CCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEE-EECS-----SCC---HHH---HH----------HT-----TCEECC
T ss_pred CCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEE-EECC-----Ccc---hhH---HH----------hc-----CceecC
Confidence 458999999999999999999999999999975 4444 121 111 00 00 222221
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCc
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI 548 (588)
.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-+-++ ++.++ .+.|.+.+|
T Consensus 190 l~ell-~~aDvVvl~~P~~~~t~~li~~~~l~~m-k~ga-~lIn~arg~~vd~~aL~~aL~~g~i 251 (313)
T 2ekl_A 190 LEELL-KNSDVISLHVTVSKDAKPIIDYPQFELM-KDNV-IIVNTSRAVAVNGKALLDYIKKGKV 251 (313)
T ss_dssp HHHHH-HHCSEEEECCCCCTTSCCSBCHHHHHHS-CTTE-EEEESSCGGGBCHHHHHHHHHTTCE
T ss_pred HHHHH-hhCCEEEEeccCChHHHHhhCHHHHhcC-CCCC-EEEECCCCcccCHHHHHHHHHcCCC
Confidence 11222 37898887754 455666555554 3344 555555554 55554 466766665
No 44
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.63 E-value=0.013 Score=59.71 Aligned_cols=125 Identities=20% Similarity=0.175 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|+|.+.++ +..+.+++|++|+|.|.|.+|+.++..|.+.|++-|.|.++ +.++...|. +...
T Consensus 106 ~~G~~~~L----~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR----------t~~ka~~La---~~~~- 167 (282)
T 3fbt_A 106 YIGFGKML----SKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR----------NPEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHH----HHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES----------CHHHHHHHC---TTSE-
T ss_pred HHHHHHHH----HHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHHHHH---HhcC-
Confidence 56665554 44578899999999999999999999999999955777776 233332121 1100
Q ss_pred hhhhhhccCCceEeCCCCccccccceeecCCCcCccch-----hhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceE
Q 007820 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ-----SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLI 550 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~-----enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~v 550 (588)
...| ..++ + + ++||+|-|+.-+.-.. -+...+ . ...+|.+-.-+|....-.+.-+++|..+
T Consensus 168 ~~~~-------~~l~--~-l--~~DivInaTp~Gm~~~~~~~pi~~~~l-~-~~~~v~DlvY~P~~T~ll~~A~~~G~~~ 233 (282)
T 3fbt_A 168 VISY-------DELS--N-L--KGDVIINCTPKGMYPKEGESPVDKEVV-A-KFSSAVDLIYNPVETLFLKYARESGVKA 233 (282)
T ss_dssp EEEH-------HHHT--T-C--CCSEEEECSSTTSTTSTTCCSSCHHHH-T-TCSEEEESCCSSSSCHHHHHHHHTTCEE
T ss_pred cccH-------HHHH--h-c--cCCEEEECCccCccCCCccCCCCHHHc-C-CCCEEEEEeeCCCCCHHHHHHHHCcCeE
Confidence 0001 0011 2 2 8999997765432111 122333 2 4578999998885333444556778665
Q ss_pred ec
Q 007820 551 AP 552 (588)
Q Consensus 551 iP 552 (588)
++
T Consensus 234 ~~ 235 (282)
T 3fbt_A 234 VN 235 (282)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 45
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=96.62 E-value=0.0042 Score=63.60 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=66.4
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.++.|++|.|+|+|++|+.+|+.|...|++|+ +.|. +++ .+.. .+ + ++++.+.
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~-~~d~-----~~~---~~~~---~~----------~-----g~~~~~l 190 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGMNIL-LYDP-----YPN---EERA---KE----------V-----NGKFVDL 190 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-----SCC---HHHH---HH----------T-----TCEECCH
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCCEEE-EECC-----CCC---hhhH---hh----------c-----CccccCH
Confidence 57999999999999999999999999999965 4444 121 1110 10 0 2222221
Q ss_pred CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCC-CCCHHH-HHHHHHCCce
Q 007820 492 AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNM-PCTPEA-VDVLKKANVL 549 (588)
Q Consensus 492 ~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~-P~T~eA-~~iL~~rGI~ 549 (588)
++++ ..|||++.|.. .+.|+.+....+ +.++-+ +.-+-+ ++..++ .+.|.+..|.
T Consensus 191 ~ell-~~aDvV~l~~p~~~~t~~li~~~~l~~m-k~ga~l-in~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 191 ETLL-KESDVVTIHVPLVESTYHLINEERLKLM-KKTAIL-INTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp HHHH-HHCSEEEECCCCSTTTTTCBCHHHHHHS-CTTCEE-EECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHH-hhCCEEEEecCCChHHhhhcCHHHHhcC-CCCeEE-EECCCCcccCHHHHHHHHHhCCCc
Confidence 2222 37899988754 455666555555 445544 444445 455554 5777776653
No 46
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.61 E-value=0.0026 Score=65.82 Aligned_cols=124 Identities=14% Similarity=0.138 Sum_probs=77.5
Q ss_pred CcEEEEeccchHHHHHHHHHHHC--------CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAY--------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~--------GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
-.+|+|.|+|+||+.+++.|.+. +.+|++|+|++.....+. ++.+.+ .+.... +.+..+ + + .
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~-~~~~~~---~~~~~~-~~~~~~---~-~-~ 75 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER-IDIGKV---ISYKEK-GSLDSL---E-Y-E 75 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT-CCHHHH---HHHHHT-TCGGGC---C-S-E
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc-cChHHH---hhhhcc-CCcccc---c-C-C
Confidence 36899999999999999998764 379999999987766654 665443 111111 122111 0 0 0
Q ss_pred EeCCCCccccccceeecCCCcC---ccchhhHHhhhhcCCeEEEecCCC-CCCHHHH---HHHHHCCceEe
Q 007820 488 YYDEAKPWNERCDVAFPCASQN---EIDQSDAINLVNSGCRILVEGSNM-PCTPEAV---DVLKKANVLIA 551 (588)
Q Consensus 488 ~i~~~eil~~dcDILIPcA~~n---~It~enA~~l~~~~akiVvEgAN~-P~T~eA~---~iL~~rGI~vi 551 (588)
..+.+++++.++||++.|+..+ ....+.+...++.|..+|++ |- |...++. +.-+++|+.+.
T Consensus 76 ~~d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvta--nK~pla~~~~eL~~~A~~~gv~~~ 144 (331)
T 3c8m_A 76 SISASEALARDFDIVVDATPASADGKKELAFYKETFENGKDVVTA--NKSGLANFWPEIMEYARSNNRRIR 144 (331)
T ss_dssp ECCHHHHHHSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEEC--CCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCHHHHhCCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEec--CchhhHHHHHHHHHHHHHcCCEEE
Confidence 0122333456899999999875 34455666667889999984 32 3333443 33456787654
No 47
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.61 E-value=0.018 Score=58.39 Aligned_cols=131 Identities=16% Similarity=0.063 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|+|.+.+++ ..+.+++|++|+|.|.|.+|+.++..|.+.|++-|.|.++ +.++...+.+....
T Consensus 111 ~~G~~~~l~----~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R----------~~~~a~~la~~~~~--- 173 (283)
T 3jyo_A 111 VSGFGRGME----EGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADL----------DTSRAQALADVINN--- 173 (283)
T ss_dssp HHHHHHHHH----HHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------SHHHHHHHHHHHHH---
T ss_pred HHHHHHHHH----HhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEEC----------CHHHHHHHHHHHHh---
Confidence 566655554 4566899999999999999999999999999965677776 23443333321111
Q ss_pred hhhhhhccCC--ceEeCCCCccc--cccceeecCCCcCccch----hhHHhhhhcCCeEEEecCCCCC-CHHHHHHHHHC
Q 007820 476 LRDYSKTYAR--SKYYDEAKPWN--ERCDVAFPCASQNEIDQ----SDAINLVNSGCRILVEGSNMPC-TPEAVDVLKKA 546 (588)
Q Consensus 476 L~~y~~~~p~--a~~i~~~eil~--~dcDILIPcA~~n~It~----enA~~l~~~~akiVvEgAN~P~-T~eA~~iL~~r 546 (588)
.+++ ...++.+++-+ .++||+|-|+.-+.-.. -+...| ....+|.+-.-+|. |+ -.+.-+++
T Consensus 174 ------~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l--~~~~~v~DlvY~P~~T~-ll~~A~~~ 244 (283)
T 3jyo_A 174 ------AVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCL--TKDHWVGDVVYMPIETE-LLKAARAL 244 (283)
T ss_dssp ------HHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGC--CTTCEEEECCCSSSSCH-HHHHHHHH
T ss_pred ------hcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHh--CCCCEEEEecCCCCCCH-HHHHHHHC
Confidence 1111 12222223222 37899997765322110 012223 24568899999884 54 33444566
Q ss_pred CceEec
Q 007820 547 NVLIAP 552 (588)
Q Consensus 547 GI~viP 552 (588)
|..+++
T Consensus 245 G~~~~~ 250 (283)
T 3jyo_A 245 GCETLD 250 (283)
T ss_dssp TCCEEC
T ss_pred cCeEeC
Confidence 765443
No 48
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.59 E-value=0.0075 Score=63.06 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=70.8
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ . |+...+.+.. .++++.+
T Consensus 168 g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-~-------dr~~~~~~~~--------------------~g~~~~~ 219 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHY-H-------NRTRLSHALE--------------------EGAIYHD 219 (345)
T ss_dssp BCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEE-E-------CSSCCCHHHH--------------------TTCEECS
T ss_pred ccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEE-E-------CCCCcchhhh--------------------cCCeEeC
Confidence 5689999999999999999999999999999764 3 3333332210 0122221
Q ss_pred C-CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~-~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
. +++ -..|||++-|.. .+.|+.+....+ + .-.+++.-|-++ +..+| .+.|++..|.
T Consensus 220 ~l~el-l~~sDvV~l~~Plt~~T~~li~~~~l~~m-k-~gailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 220 TLDSL-LGASDIFLIAAPGRPELKGFLDHDRIAKI-P-EGAVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp SHHHH-HHTCSEEEECSCCCGGGTTCBCHHHHHHS-C-TTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHH-HhhCCEEEEecCCCHHHHHHhCHHHHhhC-C-CCcEEEECCCCchhCHHHHHHHHHhCCce
Confidence 1 122 247899877654 466777766666 2 235777888887 45554 4777776665
No 49
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.55 E-value=0.0074 Score=62.48 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=64.8
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|++|++ .|.+.. +. + ..+ +.+.+
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~~~~---~~-~------------------~~~------~~~~~ 190 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIA-YDPYPM---KG-D------------------HPD------FDYVS 190 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSCC---SS-C------------------CTT------CEECC
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEE-ECCCcc---hh-h------------------Hhc------cccCC
Confidence 4589999999999999999999999999999754 443110 00 0 000 11111
Q ss_pred CCCccccccceeecCCCc-----CccchhhHHhhhhcCCeEEEecCCC-CCCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNM-PCTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~-P~T~eA-~~iL~~rGI~ 549 (588)
.++++ ..|||++-|..- +.|+.+....+ +.++-+ +.-+-+ +++.+| .+.|++.+|.
T Consensus 191 l~ell-~~aDvV~~~~P~~~~t~~li~~~~l~~m-k~ga~l-In~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 191 LEDLF-KQSDVIDLHVPGIEQNTHIINEAAFNLM-KPGAIV-INTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HHHHH-HHCSEEEECCCCCGGGTTSBCHHHHHHS-CTTEEE-EECSCTTSBCHHHHHHHHHTTSEE
T ss_pred HHHHH-hcCCEEEEcCCCchhHHHHhCHHHHhhC-CCCcEE-EECCCCcccCHHHHHHHHHhCCcc
Confidence 11122 378888877543 45666555554 445544 444444 456555 4667766654
No 50
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.54 E-value=0.024 Score=56.50 Aligned_cols=130 Identities=16% Similarity=0.101 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
+.|++..++ ..+.++++++|+|.|.|.+|+.++..|.+.|++ |.|.++ +.+++..+.+.....+
T Consensus 103 ~~G~~~~L~----~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~-v~v~~R----------~~~~a~~l~~~~~~~~- 166 (272)
T 1p77_A 103 GIGLVTDLQ----RLNWLRPNQHVLILGAGGATKGVLLPLLQAQQN-IVLANR----------TFSKTKELAERFQPYG- 166 (272)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCE-EEEEES----------SHHHHHHHHHHHGGGS-
T ss_pred HHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEEC----------CHHHHHHHHHHccccC-
Confidence 677766654 457789999999999999999999999999977 567776 3344333332111100
Q ss_pred hhhhhhccCCceEeCCCCccccccceeecCCCcCccch---hhHHhhhhcCCeEEEecCCCC-C-CHHHHHHHHHCCce-
Q 007820 476 LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMP-C-TPEAVDVLKKANVL- 549 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~---enA~~l~~~~akiVvEgAN~P-~-T~eA~~iL~~rGI~- 549 (588)
.....+.+++-..++||+|-|+.-..... -+...+ . ...+|++-.-+| . |+ ..+..+++|+.
T Consensus 167 ---------~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l-~-~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~ 234 (272)
T 1p77_A 167 ---------NIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEIL-K-LGSAFYDMQYAKGTDTP-FIALCKSLGLTN 234 (272)
T ss_dssp ---------CEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHH-H-HCSCEEESCCCTTSCCH-HHHHHHHTTCCC
T ss_pred ---------CeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHc-C-CCCEEEEeeCCCCcCCH-HHHHHHHcCCCE
Confidence 11111111111137999999887543210 011112 2 235788888777 3 65 44667889987
Q ss_pred Eecc
Q 007820 550 IAPA 553 (588)
Q Consensus 550 viPD 553 (588)
+++.
T Consensus 235 ~v~G 238 (272)
T 1p77_A 235 VSDG 238 (272)
T ss_dssp EECS
T ss_pred eeCC
Confidence 7765
No 51
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.51 E-value=0.0036 Score=64.74 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=67.6
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|. +++ .+.. .+ + ++.+.+.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~d~-----~~~---~~~~---~~----------~-----g~~~~~l 194 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGVKLY-YWSR-----HRK---VNVE---KE----------L-----KARYMDI 194 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTCEEE-EECS-----SCC---HHHH---HH----------H-----TEEECCH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EECC-----Ccc---hhhh---hh----------c-----CceecCH
Confidence 68999999999999999999999999999964 4454 221 1110 10 0 1222111
Q ss_pred CCccccccceeecCCCcC-----ccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 492 AKPWNERCDVAFPCASQN-----EIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n-----~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
++++ .+||+++.|...+ .++.+....+ +.+ +|+.-+.++ ++.++ .+.|.+..|.
T Consensus 195 ~e~l-~~aDiVil~vp~~~~t~~~i~~~~~~~m-k~g--ilin~srg~~vd~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 195 DELL-EKSDIVILALPLTRDTYHIINEERVKKL-EGK--YLVNIGRGALVDEKAVTEAIKQGKLK 255 (333)
T ss_dssp HHHH-HHCSEEEECCCCCTTTTTSBCHHHHHHT-BTC--EEEECSCGGGBCHHHHHHHHHTTCBC
T ss_pred HHHH-hhCCEEEEcCCCChHHHHHhCHHHHhhC-CCC--EEEECCCCcccCHHHHHHHHHcCCce
Confidence 1122 3899999887655 5665444444 345 778888876 44444 4677766554
No 52
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.51 E-value=0.0054 Score=63.85 Aligned_cols=117 Identities=18% Similarity=0.201 Sum_probs=70.4
Q ss_pred hCCCCCCcEEEEeccchHHHHHHHHHH-HCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 410 MNKELKGLRCVVSGSGKIAMHVLEKLI-AYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aAe~L~-e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
.+.++.|++|.|+|+|++|+.+|+.|. ..|.+|+ +.|. ..-..+.. .+ + ++.+
T Consensus 157 ~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~-~~d~-------~~~~~~~~---~~----------~-----g~~~ 210 (348)
T 2w2k_A 157 SAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLV-YYDV-------APADAETE---KA----------L-----GAER 210 (348)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS-------SCCCHHHH---HH----------H-----TCEE
T ss_pred cCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEE-EECC-------CCcchhhH---hh----------c-----CcEE
Confidence 467899999999999999999999999 9999965 4444 22122211 10 0 1222
Q ss_pred eCC-CCccccccceeecCCCc-----CccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce-Eecccc
Q 007820 489 YDE-AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAMA 555 (588)
Q Consensus 489 i~~-~eil~~dcDILIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~-viPD~l 555 (588)
.+. +++ -.+|||++.|... +.|+.+....+ +.++ +|+.-+.++ ++.++ .+.|.+..|. ..-|+.
T Consensus 211 ~~~l~el-l~~aDvVil~vp~~~~t~~li~~~~l~~m-k~ga-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~ 283 (348)
T 2w2k_A 211 VDSLEEL-ARRSDCVSVSVPYMKLTHHLIDEAFFAAM-KPGS-RIVNTARGPVISQDALIAALKSGKLLSAGLDVH 283 (348)
T ss_dssp CSSHHHH-HHHCSEEEECCCCSGGGTTCBCHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHTTSEEEEEESSC
T ss_pred eCCHHHH-hccCCEEEEeCCCChHHHHHhhHHHHhcC-CCCC-EEEECCCCchhCHHHHHHHHHhCCceEEEeccC
Confidence 211 112 2379999988654 55665555544 3454 555666664 55554 4667665554 334443
No 53
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.51 E-value=0.0067 Score=61.31 Aligned_cols=110 Identities=19% Similarity=0.293 Sum_probs=71.1
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ei 494 (588)
.||+|+|+|++|...++.|.+. ++++++|+|. +.++. ....+ .++.....++ +++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~----------~~~~~---~~~~~----------~~~~~~~~~~~~~~ 58 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR----------KLETA---ATFAS----------RYQNIQLFDQLEVF 58 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS----------SHHHH---HHHGG----------GSSSCEEESCHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC----------CHHHH---HHHHH----------HcCCCeEeCCHHHH
Confidence 4899999999999999988876 6889999987 23332 11111 1211122222 334
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCH-HHH---HHHHHCCceEe
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAV---DVLKKANVLIA 551 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~---~iL~~rGI~vi 551 (588)
++.++|+++-|+. +..+.+.+...++.+..+++|-- +-+|. ++. +..+++|+.+.
T Consensus 59 l~~~~D~V~i~tp-~~~h~~~~~~al~~gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~ 117 (325)
T 2ho3_A 59 FKSSFDLVYIASP-NSLHFAQAKAALSAGKHVILEKP-AVSQPQEWFDLIQTAEKNNCFIF 117 (325)
T ss_dssp HTSSCSEEEECSC-GGGHHHHHHHHHHTTCEEEEESS-CCSSHHHHHHHHHHHHHTTCCEE
T ss_pred hCCCCCEEEEeCC-hHHHHHHHHHHHHcCCcEEEecC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 4468999998875 55677777777788989999842 22333 333 34467787665
No 54
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.43 E-value=0.0072 Score=63.18 Aligned_cols=107 Identities=18% Similarity=0.223 Sum_probs=67.7
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |.+. + . .+ .. ..++.+
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~-d~~~-----~--~--~~-------------~~------~~~~~~ 193 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAY-DVAY-----N--P--EF-------------EP------FLTYTD 193 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSSC-----C--G--GG-------------TT------TCEECC
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEE-CCCh-----h--h--hh-------------hc------cccccC
Confidence 45789999999999999999999999999997644 3311 1 0 00 00 111221
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.+++ -..|||++-|.. .+.|+.+....+ +.++ +++.-|-++ +..+| .+.|++..|.
T Consensus 194 l~el-l~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~ 256 (343)
T 2yq5_A 194 FDTV-LKEADIVSLHTPLFPSTENMIGEKQLKEM-KKSA-YLINCARGELVDTGALIKALQDGEIA 256 (343)
T ss_dssp HHHH-HHHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHH-HhcCCEEEEcCCCCHHHHHHhhHHHHhhC-CCCc-EEEECCCChhhhHHHHHHHHHcCCCc
Confidence 1122 237898877654 567777766665 3344 666666665 45444 4778777663
No 55
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.42 E-value=0.016 Score=58.31 Aligned_cols=109 Identities=11% Similarity=0.052 Sum_probs=64.5
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE-e-CCCC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY-Y-DEAK 493 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~-i-~~~e 493 (588)
.++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++..+.+ . ++.. . +..+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V-~~~dr----------~~~~~~~~~~---~------------g~~~~~~~~~e 60 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLST-WGADL----------NPQACANLLA---E------------GACGAAASARE 60 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHHH---T------------TCSEEESSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeE-EEEEC----------CHHHHHHHHH---c------------CCccccCCHHH
Confidence 468999999999999999999999985 45565 3344322221 1 1111 1 2222
Q ss_pred ccccccceeecCCCcCccchhhH---Hhh---hhcCCeEEEecCCC-CCC-HHHHHHHHHCCceEec
Q 007820 494 PWNERCDVAFPCASQNEIDQSDA---INL---VNSGCRILVEGSNM-PCT-PEAVDVLKKANVLIAP 552 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA---~~l---~~~~akiVvEgAN~-P~T-~eA~~iL~~rGI~viP 552 (588)
. -.+||++|-|........+.. ..+ .+.+ ++|+..++. |.+ .+..+.+.++|+.|+.
T Consensus 61 ~-~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 61 F-AGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPG-SAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp T-TTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTT-CEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred H-HhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 2 247999999887643222221 122 1234 455555554 333 3445677888988764
No 56
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.41 E-value=0.0047 Score=63.61 Aligned_cols=109 Identities=9% Similarity=0.162 Sum_probs=66.1
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.++.|++|.|+|+|++|+.+|+.|...|.+|+ +.|. +++ ..+.+ . .+ +..+.+.
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~-----~~~--~~~~~------~-------~~-----g~~~~~l 204 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRF-LYTG-----RQP--RPEEA------A-------EF-----QAEFVST 204 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEE-EEES-----SSC--CHHHH------H-------TT-----TCEECCH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EECC-----CCc--chhHH------H-------hc-----CceeCCH
Confidence 57899999999999999999999999999965 4443 111 11111 0 01 1222211
Q ss_pred CCccccccceeecCCCc-----CccchhhHHhhhhcCCeEEEecCCCC-CCHH-HHHHHHHCCce
Q 007820 492 AKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPE-AVDVLKKANVL 549 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~e-A~~iL~~rGI~ 549 (588)
+++ -.+|||++.|... +.++.+....+ +.++ +|+.-+.++ ++.+ ..+.|.+.+|.
T Consensus 205 ~e~-l~~aDvVi~~vp~~~~t~~~i~~~~~~~m-k~ga-ilIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 205 PEL-AAQSDFIVVACSLTPATEGLCNKDFFQKM-KETA-VFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp HHH-HHHCSEEEECCCCCTTTTTCBSHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHH-HhhCCEEEEeCCCChHHHHhhCHHHHhcC-CCCc-EEEECCCCcccCHHHHHHHHHcCCcc
Confidence 112 2489999888654 45554444444 3344 555666664 4544 45677776653
No 57
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.40 E-value=0.013 Score=60.84 Aligned_cols=105 Identities=14% Similarity=0.187 Sum_probs=65.1
Q ss_pred cEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh------ccCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~------~~p~--a~ 487 (588)
.||+|.|||.+|+.+++.|.+ .+..||+|.|. -.|.+.+..|+++....+.+....+ .+.+ .+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~--------~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~ 75 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDP--------FIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPIT 75 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECS--------SSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCC--------CCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEE
Confidence 489999999999999999876 46899999873 0144555444443332233221100 0000 11
Q ss_pred Ee---CCCCc-c-ccccceeecCCCcCccchhhHHhhhhcCCeEEEec
Q 007820 488 YY---DEAKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (588)
Q Consensus 488 ~i---~~~ei-l-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEg 530 (588)
.+ +++++ | +.+||+++.|+. .-.+.+.|...++.|||.|.=.
T Consensus 76 v~~~~d~~~l~~~~~~vDvV~eatg-~~~~~e~a~~~l~aGak~V~iS 122 (335)
T 1u8f_O 76 IFQERDPSKIKWGDAGAEYVVESTG-VFTTMEKAGAHLQGGAKRVIIS 122 (335)
T ss_dssp EECCSSGGGCCTTTTTCCEEEECSS-SCCSHHHHGGGGGGTCSEEEES
T ss_pred EEecCCHHHCccccCCCCEEEECCC-chhhHHHHHHHHhCCCeEEEec
Confidence 12 22333 6 468999999874 5567888888888896665544
No 58
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.39 E-value=0.018 Score=58.40 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=80.1
Q ss_pred cHHHHHHHHHHHHHHhC-CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc
Q 007820 395 TGYGLVFFAQLILADMN-KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g-~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~ 473 (588)
.+.|+..+++ ..+ .+++|++|+|.|.|.+|+.++..|.+.|++-|.|.++ +.+++..+.+.....
T Consensus 123 d~~G~~~~l~----~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR----------~~~ka~~la~~~~~~ 188 (297)
T 2egg_A 123 DGLGYVQALE----EEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANR----------TVEKAERLVREGDER 188 (297)
T ss_dssp HHHHHHHHHH----HHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECS----------SHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHH----HhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHHHhhhc
Confidence 3556555554 455 6899999999999999999999999999854678776 234433232211000
Q ss_pred CChhhhhhccCCceEeCCCCc--cccccceeecCCCcCccchh-----hHHhhhhcCCeEEEecCCCCCCHHHHHHHHHC
Q 007820 474 RSLRDYSKTYARSKYYDEAKP--WNERCDVAFPCASQNEIDQS-----DAINLVNSGCRILVEGSNMPCTPEAVDVLKKA 546 (588)
Q Consensus 474 gsL~~y~~~~p~a~~i~~~ei--l~~dcDILIPcA~~n~It~e-----nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~r 546 (588)
.+ ..++-+++ .-.++||+|-|+.-...... ....| + .-.+|++-.-+|....-.+..+++
T Consensus 189 ---------~~--~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l-~-~~~~v~D~~y~P~~T~ll~~A~~~ 255 (297)
T 2egg_A 189 ---------RS--AYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERL-R-PGVIVSDIIYNPLETKWLKEAKAR 255 (297)
T ss_dssp ---------SC--CEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTC-C-TTCEEEECCCSSSSCHHHHHHHHT
T ss_pred ---------cC--ceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHc-C-CCCEEEEcCCCCCCCHHHHHHHHC
Confidence 00 11110111 12478999988865432110 01112 2 345788888778433355677889
Q ss_pred CceEeccc
Q 007820 547 NVLIAPAM 554 (588)
Q Consensus 547 GI~viPD~ 554 (588)
|+.++++.
T Consensus 256 G~~~v~Gl 263 (297)
T 2egg_A 256 GARVQNGV 263 (297)
T ss_dssp TCEEECSH
T ss_pred cCEEECCH
Confidence 99988774
No 59
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.38 E-value=0.0057 Score=63.63 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=66.4
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |. .. +.+.. . . .++++.+
T Consensus 160 ~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~-d~-------~~-~~~~~---~----------~-----~g~~~~~ 212 (335)
T 2g76_A 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTIGY-DP-------II-SPEVS---A----------S-----FGVQQLP 212 (335)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE-CS-------SS-CHHHH---H----------H-----TTCEECC
T ss_pred CcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEE-CC-------Cc-chhhh---h----------h-----cCceeCC
Confidence 45899999999999999999999999999997543 33 21 11110 0 0 0222221
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.+++ -..|||++-|.. .+.|+.+....+ +.++ +++.-+-++ +..+| .+.|.+..|.
T Consensus 213 l~el-l~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 213 LEEI-WPLCDFITVHTPLLPSTTGLLNDNTFAQC-KKGV-RVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp HHHH-GGGCSEEEECCCCCTTTTTSBCHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred HHHH-HhcCCEEEEecCCCHHHHHhhCHHHHhhC-CCCc-EEEECCCccccCHHHHHHHHHhCCcc
Confidence 1122 237899988754 455665555544 3344 555656565 45444 5777776654
No 60
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.37 E-value=0.044 Score=56.56 Aligned_cols=135 Identities=12% Similarity=0.141 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
++|.+.+++ ..+.+++|++++|.|.|.+|+.++..|.+.|++-|.|.+++ ++ +.++...+.+.....
T Consensus 138 ~~Gf~~~L~----~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~-----~~--~~~~a~~la~~~~~~-- 204 (315)
T 3tnl_A 138 GTGYMRALK----EAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRK-----DD--FYANAEKTVEKINSK-- 204 (315)
T ss_dssp HHHHHHHHH----HTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS-----ST--THHHHHHHHHHHHHH--
T ss_pred HHHHHHHHH----HcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC-----Cc--hHHHHHHHHHHhhhh--
Confidence 666665554 46789999999999999999999999999999556777762 11 134433333211110
Q ss_pred hhhhhhccC-CceEeCCCCc--c---ccccceeecCCCcCccc---hh---hHHhhhhcCCeEEEecCCCCCCHHHHHHH
Q 007820 476 LRDYSKTYA-RSKYYDEAKP--W---NERCDVAFPCASQNEID---QS---DAINLVNSGCRILVEGSNMPCTPEAVDVL 543 (588)
Q Consensus 476 L~~y~~~~p-~a~~i~~~ei--l---~~dcDILIPcA~~n~It---~e---nA~~l~~~~akiVvEgAN~P~T~eA~~iL 543 (588)
++ ....++-++. + -.++||+|-|+.-+.-. .. +...| ....+|++-.-.|..-.-.+.-
T Consensus 205 -------~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l--~~~~~V~DlvY~P~~T~ll~~A 275 (315)
T 3tnl_A 205 -------TDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADML--RPELIVSDVVYKPTKTRLLEIA 275 (315)
T ss_dssp -------SSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGC--CTTCEEEESCCSSSSCHHHHHH
T ss_pred -------cCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHc--CCCCEEEEeccCCCCCHHHHHH
Confidence 11 0122221111 1 13789999776533211 11 22233 2457889999998533334445
Q ss_pred HHCCceEec
Q 007820 544 KKANVLIAP 552 (588)
Q Consensus 544 ~~rGI~viP 552 (588)
+++|..+++
T Consensus 276 ~~~G~~~~~ 284 (315)
T 3tnl_A 276 EEQGCQTLN 284 (315)
T ss_dssp HHTTCEEEC
T ss_pred HHCCCeEeC
Confidence 677766443
No 61
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.36 E-value=0.0091 Score=62.48 Aligned_cols=112 Identities=12% Similarity=0.139 Sum_probs=68.9
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
++.++|.|+|+|++|..+|+.|.+.|..| .+.|. +.+++..+. +. ++...+. +
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V-~v~dr----------~~~~~~~l~---~~------------g~~~~~s~~ 73 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHEC-VVYDL----------NVNAVQALE---RE------------GIAGARSIE 73 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---TT------------TCBCCSSHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHHH---HC------------CCEEeCCHH
Confidence 45789999999999999999999999985 45565 333432222 11 1111111 1
Q ss_pred Ccccccc---ceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCC--CCHHHHHHHHHCCceEecc
Q 007820 493 KPWNERC---DVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAPA 553 (588)
Q Consensus 493 eil~~dc---DILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P--~T~eA~~iL~~rGI~viPD 553 (588)
++ -..| ||+|-|-... ...+....|.. ..-.+|+..+|.. .+.+..+.+.++|+.|+.-
T Consensus 74 e~-~~~a~~~DvVi~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 74 EF-CAKLVKPRVVWLMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp HH-HHHSCSSCEEEECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HH-HhcCCCCCEEEEeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 11 1244 9999887766 33333444432 1345788888875 3455667889999998853
No 62
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=96.34 E-value=0.0076 Score=63.13 Aligned_cols=110 Identities=17% Similarity=0.149 Sum_probs=68.8
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |. .. +.+. .. . .++++.+
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~-d~-------~~-~~~~------~~-------~-----~g~~~~~ 207 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVW-GR-------EN-SKER------AR-------A-----DGFAVAE 207 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS-------HH-HHHH------HH-------H-----TTCEECS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEE-CC-------CC-CHHH------HH-------h-----cCceEeC
Confidence 46899999999999999999999999999997643 33 21 0100 00 0 1233332
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHH-HHHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPE-AVDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~e-A~~iL~~rGI~ 549 (588)
.-+-+-..|||++-|.. .+.|+.+....+ +.++ +++.-|.++ +..+ ..+.|++.+|.
T Consensus 208 ~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~m-k~ga-ilIN~aRg~~vd~~aL~~aL~~g~i~ 271 (352)
T 3gg9_A 208 SKDALFEQSDVLSVHLRLNDETRSIITVADLTRM-KPTA-LFVNTSRAELVEENGMVTALNRGRPG 271 (352)
T ss_dssp SHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTC-EEEECSCGGGBCTTHHHHHHHHTSSS
T ss_pred CHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhC-CCCc-EEEECCCchhhcHHHHHHHHHhCCcc
Confidence 11112247899887653 456666655555 3344 666777765 4443 45888888774
No 63
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.30 E-value=0.008 Score=61.61 Aligned_cols=52 Identities=21% Similarity=0.306 Sum_probs=45.0
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
...|.+|++ ++|++.+.+++|++|+|.|.|+ ||..+|.+|..+|++ |+|+.+
T Consensus 141 ~PcTp~gv~----~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 193 (285)
T 3l07_A 141 ESCTPKGIM----TMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKAT-VTTCHR 193 (285)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeC
Confidence 458999986 4566678899999999999988 899999999999998 578876
No 64
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.30 E-value=0.015 Score=61.03 Aligned_cols=105 Identities=16% Similarity=0.273 Sum_probs=70.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC--ceE
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SKY 488 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~--a~~ 488 (588)
.||.|-|||.+|+.+++.+.+.|..||+|.|. -+|.+.+..|+++-...|.+..-.+. +.+ .+.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp--------~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v 79 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDP--------FIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISV 79 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEE
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCC--------CCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEE
Confidence 58999999999999999999889999999875 24777776666654444543221100 111 111
Q ss_pred e---CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEec
Q 007820 489 Y---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (588)
Q Consensus 489 i---~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (588)
. ++++ .| +..+|+++.|+ +.-.+.+-|..-++.||| +|+.+
T Consensus 80 ~~e~dp~~i~W~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVVIsa 126 (346)
T 3h9e_O 80 YQCKEPKQIPWRAVGSPYVVEST-GVYLSIQAASDHISAGAQRVVISA 126 (346)
T ss_dssp ECCSSGGGCCGGGGTSCEEEECS-SSCCSHHHHHHHHHTTCSEEEESS
T ss_pred EecCChhhCCcccccccEEEEec-cccCCHHHHHHHHHcCCCEEEECC
Confidence 1 1222 35 46899999987 556788888888888994 55543
No 65
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.29 E-value=0.0035 Score=62.88 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=71.0
Q ss_pred CCcEEEEeccchHHHH-HHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 415 KGLRCVVSGSGKIAMH-VLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~-aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
+-.||+|+|+|++|.. .++.|.+ .++.+++|+|. |.+++..+.+ . | +-..+-+.+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a~---~------~----~~~~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP----------NKVKREKICS---D------Y----RIMPFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS----------CHHHHHHHHH---H------H----TCCBCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHHHHHHH---H------c----CCCCcCCHH
Confidence 4479999999999995 7887776 57899999987 3344322221 1 1 100111223
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
+++. ++|+++-|.. +..+.+.+...++.+..+++|=-=.....++. +..+++|+.+...
T Consensus 62 ~ll~-~~D~V~i~tp-~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 123 (308)
T 3uuw_A 62 SLAK-KCDCIFLHSS-TETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVG 123 (308)
T ss_dssp HHHT-TCSEEEECCC-GGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHh-cCCEEEEeCC-cHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 4556 8999997664 55667777777788999999841111123333 4446677765543
No 66
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.28 E-value=0.0094 Score=60.64 Aligned_cols=113 Identities=11% Similarity=0.161 Sum_probs=70.7
Q ss_pred cEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 417 krVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
.||.|+|+|++|+ +.+..|.+. +++|++|+|. |.++...+. ++|+-....++ ++
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~----------~~~~a~~~a-------------~~~g~~~~y~d~~e 80 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR----------DLTRAREMA-------------DRFSVPHAFGSYEE 80 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS----------SHHHHHHHH-------------HHHTCSEEESSHHH
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC----------CHHHHHHHH-------------HHcCCCeeeCCHHH
Confidence 5999999999997 556777664 7899999997 344432221 11221122222 44
Q ss_pred cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 494 il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
++ +.++|+++=|+ .+..+.+.+...++.|..++||=-=.....||. +..+++|+.+...
T Consensus 81 ll~~~~iDaV~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 81 MLASDVIDAVYIPL-PTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp HHHCSSCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEEC
T ss_pred HhcCCCCCEEEEeC-CCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEe
Confidence 55 35788888876 456778888888888999999842112223444 3345667665543
No 67
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.28 E-value=0.005 Score=62.09 Aligned_cols=112 Identities=21% Similarity=0.259 Sum_probs=68.8
Q ss_pred CCcEEEEeccchHHHH-HHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 415 KGLRCVVSGSGKIAMH-VLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~-aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
+-.||+|+|+|++|+. .++.|.+ .++.+++|+|. +++- .++ +.+ . | +....++.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~-----~~~~--~~~---~~~---~------~-----g~~~~~~~ 59 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP-----TRAK--ALP---ICE---S------W-----RIPYADSL 59 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS-----SCTT--HHH---HHH---H------H-----TCCBCSSH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC-----CHHH--HHH---HHH---H------c-----CCCccCcH
Confidence 3469999999999985 7887766 47899999997 4432 111 111 1 1 11111111
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCC-HHHH---HHHHHCCceEec
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAP 552 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~---~iL~~rGI~viP 552 (588)
+.+..++|+++-|+. +..+.+.+...++.+..+++|-- +.+| .++. +..+++|+.+..
T Consensus 60 ~~l~~~~D~V~i~tp-~~~h~~~~~~al~~G~~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 60 SSLAASCDAVFVHSS-TASHFDVVSTLLNAGVHVCVDKP-LAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp HHHHTTCSEEEECSC-TTHHHHHHHHHHHTTCEEEEESS-SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHhhcCCCEEEEeCC-chhHHHHHHHHHHcCCeEEEeCC-CCCCHHHHHHHHHHHHHcCCeEEE
Confidence 122568999997664 56677778777788989999841 1123 3333 344677876654
No 68
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.27 E-value=0.012 Score=61.06 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEE
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaV 445 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++.
T Consensus 135 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~ 169 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGV 169 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcccccceEEEEEECHHHHHHHHHHHhCCCEEEEE
Confidence 35799999999999999999999999999997654
No 69
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=96.26 E-value=0.0083 Score=62.75 Aligned_cols=103 Identities=17% Similarity=0.289 Sum_probs=67.1
Q ss_pred cEEEEeccchHHHHHHHHHHHC----CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh------ccCC-
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY----GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYAR- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~----GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~------~~p~- 485 (588)
.||+|-|||-+|+.+++.|.+. ...||+|.|. .|.+.+..|+++....|++.+-.+ .+.+
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~---------~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~ 72 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL---------GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGD 72 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC---------CCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCE
Confidence 4899999999999999999887 5789999984 366655555554443333221100 0111
Q ss_pred -ceEe---CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEe
Q 007820 486 -SKYY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (588)
Q Consensus 486 -a~~i---~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (588)
.+.. ++++ .| +..+||++.|+ +..++.+.|...++.||| +|+-
T Consensus 73 ~i~v~~~~dp~~~~w~~~gvDiV~est-G~f~s~e~a~~h~~aGakkVviS 122 (335)
T 1obf_O 73 KIRVDANRNPAQLPWGALKVDVVLECT-GFFTTKEKAGAHIKGGAKKVIIS 122 (335)
T ss_dssp EEEEECCSCGGGSCTTTTTCSEEEECS-SSCCSHHHHHHHHHHTCSEEEES
T ss_pred EEEEEEcCCcccCCccccCCCEEEEcc-CccccHHHHHHHHHcCCCEEEEC
Confidence 1111 1112 36 36899999987 566788888888888997 5553
No 70
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.26 E-value=0.0087 Score=61.35 Aligned_cols=52 Identities=25% Similarity=0.383 Sum_probs=45.1
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
...|.+|++ ++|++.+.+++|++|+|.|.|+ ||..+|..|...|++ |+|+++
T Consensus 140 ~PcTp~gv~----~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt-Vtv~h~ 192 (285)
T 3p2o_A 140 LPCTPLGVM----KLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGAT-VSVCHI 192 (285)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCHHHHH----HHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeC
Confidence 458999985 4566678999999999999987 899999999999998 678876
No 71
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.24 E-value=0.012 Score=61.00 Aligned_cols=109 Identities=16% Similarity=0.233 Sum_probs=67.4
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++. |.+.. ..++++ .. ....+
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~-dr~~~--~~~~~~------------------~~------~~~~~ 184 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGV-NTTGH--PADHFH------------------ET------VAFTA 184 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE-ESSCC--CCTTCS------------------EE------EEGGG
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEE-CCCcc--hhHhHh------------------hc------cccCC
Confidence 56899999999999999999999999999998764 33110 001110 00 00001
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
-+++ -..|||++-|.. .+.|+.+....+ +.+ .+++.-|-++ +..+| .+.|++..|.
T Consensus 185 l~el-l~~aDvV~l~lPlt~~t~~li~~~~l~~m-k~g-ailIN~aRG~~vd~~aL~~aL~~g~i~ 247 (324)
T 3evt_A 185 TADA-LATANFIVNALPLTPTTHHLFSTELFQQT-KQQ-PMLINIGRGPAVDTTALMTALDHHQLS 247 (324)
T ss_dssp CHHH-HHHCSEEEECCCCCGGGTTCBSHHHHHTC-CSC-CEEEECSCGGGBCHHHHHHHHHTTSCS
T ss_pred HHHH-HhhCCEEEEcCCCchHHHHhcCHHHHhcC-CCC-CEEEEcCCChhhhHHHHHHHHHhCCce
Confidence 1112 237899887654 566776666555 334 4666667665 55555 4677776664
No 72
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.21 E-value=0.011 Score=60.44 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=65.4
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.++.|+||.|.|+|++|+.+|+.|...|.+|++. |.+. +-.+ ..+..+.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~-dr~~-----~~~~-------------------------~~~~~~~ 166 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAY-TRSS-----VDQN-------------------------VDVISES 166 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEE-CSSC-----CCTT-------------------------CSEECSS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEE-eccc-----cccc-------------------------cccccCC
Confidence 4689999999999999999999999999997654 4311 1000 0011111
Q ss_pred CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 492 AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 492 ~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
-+-+-..|||++-|.. .+.|+.+....+ +.++ +|+.-|-++ +..+| .+.|++.+|.
T Consensus 167 l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m-k~ga-ilIN~aRG~~vd~~aL~~aL~~g~i~ 229 (290)
T 3gvx_A 167 PADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA-RKNL-TIVNVARADVVSKPDMIGFLKERSDV 229 (290)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC-CTTC-EEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred hHHHhhccCeEEEEeeccccchhhhhHHHHhhh-hcCc-eEEEeehhcccCCcchhhhhhhccce
Confidence 0011236888876654 455666665555 3344 566666665 55444 5778877664
No 73
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.19 E-value=0.012 Score=61.44 Aligned_cols=106 Identities=11% Similarity=0.227 Sum_probs=66.0
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChh-hhhhc-------cCC--
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR-DYSKT-------YAR-- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~-~y~~~-------~p~-- 485 (588)
.||+|.|||.+|+.+++.|.+. +..||+|.|.. .|.+.+..++++....|.+. ...+. ..+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~--------~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~ 75 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPF--------ITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSS--------SCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCC--------CCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeE
Confidence 5899999999999999999876 68999999831 14444333333222223322 10000 000
Q ss_pred ceEe---CCCCc-c-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEecC
Q 007820 486 SKYY---DEAKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGS 531 (588)
Q Consensus 486 a~~i---~~~ei-l-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvEgA 531 (588)
...+ +++++ | ..++|+++.|+. .-.+.+.|...++.|+| +|++..
T Consensus 76 i~v~~~~dp~~l~w~~~~vDvV~eaTg-~~~~~e~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 76 VTVFGIRNPDEIPWAEAGAEYVVESTG-VFTDKEKAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp EEEECCSCGGGCCHHHHTCSEEEECSS-SCCSHHHHTHHHHTTCSEEEESSC
T ss_pred EEEEecCChHHccccccCCCEEEECCC-chhhHHHHHHHHHcCCCEEEEecC
Confidence 1112 22333 5 358999999875 45678888888888994 777764
No 74
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.17 E-value=0.024 Score=58.49 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=66.1
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.++.|+||.|.|+|++|+.+|+.|...|.+|++..-+.. ..++++. + + +. .+-
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~---~~~~~~~------------------~---~-~~--~~l 187 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRK---SWPGVES------------------Y---V-GR--EEL 187 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCC---CCTTCEE------------------E---E-SH--HHH
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCch---hhhhhhh------------------h---c-cc--CCH
Confidence 578999999999999999999999999999876643311 1112110 0 0 00 000
Q ss_pred CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 492 AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 492 ~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
+++ -..|||++-|.. .+.|+.+....+ +. -.+++.-|-++ +..+| .+.|++..|.
T Consensus 188 ~el-l~~aDiV~l~~Plt~~t~~li~~~~l~~m-k~-gailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 188 RAF-LNQTRVLINLLPNTAQTVGIINSELLDQL-PD-GAYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp HHH-HHTCSEEEECCCCCGGGTTCBSHHHHTTS-CT-TEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHH-HhhCCEEEEecCCchhhhhhccHHHHhhC-CC-CCEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 111 136788876643 456666655554 22 34677777776 44444 4777776664
No 75
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.17 E-value=0.013 Score=59.99 Aligned_cols=37 Identities=27% Similarity=0.435 Sum_probs=32.1
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.
T Consensus 139 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~-~~d~ 175 (311)
T 2cuk_A 139 GLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVV-YHAR 175 (311)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEE-EECC
Confidence 347899999999999999999999999999965 4444
No 76
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.16 E-value=0.042 Score=59.87 Aligned_cols=179 Identities=15% Similarity=0.135 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHHHHHHHHHHH
Q 007820 329 RFCQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGLVFFAQLILA 408 (588)
Q Consensus 329 R~~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV~~~i~~~l~ 408 (588)
.|. .++..+..-.|. |-=.|++.. .--.|-+.|+.-... .++ .+--.-||-=+..++..+++
T Consensus 150 efv-e~v~~~~P~fG~---InlEDf~ap--~af~il~ryr~~~~i--pvF----------nDD~qGTA~V~lAgllnAlk 211 (487)
T 3nv9_A 150 AVI-EFVQRIQHTFGA---INLEDISQP--NCYKILDVLRESCDI--PVW----------HDDQQGTASVTLAGLLNALK 211 (487)
T ss_dssp HHH-HHHHHHGGGCSE---EEECSCCTT--HHHHHHHHHHHHCSS--CEE----------ETTTHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHhCCCCCe---ecHhhcCCc--hHHHHHHHHHhhccC--Ccc----------ccccchHHHHHHHHHHHHHH
Confidence 444 366666654433 556788653 444566777753211 111 12234577777788889999
Q ss_pred HhCCCCCCcEEEEeccchHHHHHHHHHHHCCC--eEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCc
Q 007820 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARS 486 (588)
Q Consensus 409 ~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GA--KVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a 486 (588)
-.|.+|+..||+|.|.|..|..+|++|...|. +=|.+.|++|.|+.... .| ...+ ....-..|+... +.
T Consensus 212 i~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~----~l---~~~~-~~~~k~~~A~~~-n~ 282 (487)
T 3nv9_A 212 LVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGRE----DI---KKDT-RFYRKWEICETT-NP 282 (487)
T ss_dssp HHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCH----HH---HHCG-GGHHHHHHHHHS-CT
T ss_pred HhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcc----hh---hhhc-ccHHHHHHHHhc-cc
Confidence 99999999999999999999999999999998 55789999999986541 11 1100 000000111000 00
Q ss_pred eEeCCCCccc--cccceeecCCCc--CccchhhHHhhhhcCCeEEEecCCC-C-CCHH
Q 007820 487 KYYDEAKPWN--ERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNM-P-CTPE 538 (588)
Q Consensus 487 ~~i~~~eil~--~dcDILIPcA~~--n~It~enA~~l~~~~akiVvEgAN~-P-~T~e 538 (588)
. ....+.+ ..+||||-+++. +.+|++-.+.+ +.-.||---||- | +|||
T Consensus 283 ~--~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~M--a~~PIIFaLSNPtpEi~pe 336 (487)
T 3nv9_A 283 S--KFGSIAEACVGADVLISLSTPGPGVVKAEWIKSM--GEKPIVFCCANPVPEIYPY 336 (487)
T ss_dssp T--CCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTS--CSSCEEEECCSSSCSSCHH
T ss_pred c--cCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhh--cCCCEEEECCCCCccCCHH
Confidence 0 0011211 145999999954 89999999998 356788888885 3 5654
No 77
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.16 E-value=0.0064 Score=63.27 Aligned_cols=83 Identities=8% Similarity=0.070 Sum_probs=60.0
Q ss_pred cEEEEeccchHHHHHHHHHHHC---------CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---------GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
.+|+|.|+|+||+.+++.|.+. +.+|++|+|++ ...+.+++. ..
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~~~~~~-------------------------~~ 56 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKPRAIPQ-------------------------EL 56 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSCCSSCG-------------------------GG
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHhhccCc-------------------------cc
Confidence 5899999999999999998775 57899999984 112223321 01
Q ss_pred Ee-CCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEE
Q 007820 488 YY-DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (588)
Q Consensus 488 ~i-~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVv 528 (588)
+. +.++++ ++||++.|+.......+-+.+.++.|..+|+
T Consensus 57 ~~~d~~~ll--~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 57 LRAEPFDLL--EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp EESSCCCCT--TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred ccCCHHHHh--CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 11 335566 9999999987665556677666788999999
No 78
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.14 E-value=0.011 Score=59.57 Aligned_cols=109 Identities=18% Similarity=0.229 Sum_probs=67.9
Q ss_pred cEEEEeccchHHHHH-HHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCCc
Q 007820 417 LRCVVSGSGKIAMHV-LEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~a-Ae~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~ei 494 (588)
.||+|+|+|++|... ++.|.+.+..+++|+|. |.+++..+. +..+ .....+ .+++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~----------~~~~~~~~~---~~~g----------~~~~~~~~~~~ 57 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMST----------SAERGAAYA---TENG----------IGKSVTSVEEL 57 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECS----------CHHHHHHHH---HHTT----------CSCCBSCHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECC----------CHHHHHHHH---HHcC----------CCcccCCHHHH
Confidence 379999999999987 77777788999999987 333332111 1111 001111 1234
Q ss_pred cc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHH---HHHHHCCceEec
Q 007820 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAV---DVLKKANVLIAP 552 (588)
Q Consensus 495 l~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~---~iL~~rGI~viP 552 (588)
+. .++|+++-|.. +..+.+.+...++.+..+++|- |+ | .++. +..+++|+.+..
T Consensus 58 l~~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 58 VGDPDVDAVYVSTT-NELHREQTLAAIRAGKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp HTCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred hcCCCCCEEEEeCC-hhHhHHHHHHHHHCCCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 43 47999998775 5556777777778888899973 32 3 3333 334567776543
No 79
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.14 E-value=0.0072 Score=61.60 Aligned_cols=111 Identities=13% Similarity=0.059 Sum_probs=72.1
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ei 494 (588)
.||+|+|+|++|...++.|.+. ++.+++|+|. |.+++..+. +. + +....++ +++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a---~~----------~-g~~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADP----------FIEGAQRLA---EA----------N-GAEAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------SHHHHHHHH---HT----------T-TCEEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC----------CHHHHHHHH---HH----------c-CCceeCCHHHH
Confidence 5899999999999999988886 7899999987 333332111 11 1 1222222 344
Q ss_pred cc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCC-HHHH---HHHHHCCceEecc
Q 007820 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 495 l~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~---~iL~~rGI~viPD 553 (588)
+. .++|+++-|. .+..+.+.+...++.+..+++|--= -+| .++. +..+++|+.+...
T Consensus 61 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~-~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 61 FARDDIDGIVIGS-PTSTHVDLITRAVERGIPALCEKPI-DLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp TTCSCCCEEEECS-CGGGHHHHHHHHHHTTCCEEECSCS-CSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred hcCCCCCEEEEeC-CchhhHHHHHHHHHcCCcEEEECCC-CCCHHHHHHHHHHHHhcCCeEEec
Confidence 43 5899999876 4566777788888889999999521 123 3443 3345667765543
No 80
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.13 E-value=0.011 Score=59.88 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=72.1
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
.||+|+|+|++|...++.|.+. ++++++|+|. |.+++..+.+ . + +..+-+.++++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~~~---~----------~-~~~~~~~~~~l 59 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA----------FPAAAEAIAG---A----------Y-GCEVRTIDAIE 59 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------SHHHHHHHHH---H----------T-TCEECCHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC----------CHHHHHHHHH---H----------h-CCCcCCHHHHh
Confidence 5899999999999999988885 8899999987 3333321211 1 1 12211223444
Q ss_pred -ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 496 -NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 496 -~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
..++|+++-|. .+..+.+.+...++.+..+++|--=.....++. +..+++|+.+...
T Consensus 60 ~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 60 AAADIDAVVICT-PTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp HCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCCCCEEEEeC-CchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 34789998776 456677777777788999999852111223333 3446778766544
No 81
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.13 E-value=0.055 Score=55.78 Aligned_cols=135 Identities=13% Similarity=0.109 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|+|.+.+++ ..+.+++|++++|.|.|-+|+.++..|.+.|++-|.|.++ +++- .++...|.+....
T Consensus 132 ~~Gf~~~L~----~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nR-----t~~~--~~~a~~la~~~~~--- 197 (312)
T 3t4e_A 132 GTGHIRAIK----ESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNR-----KDDF--FEKAVAFAKRVNE--- 197 (312)
T ss_dssp HHHHHHHHH----HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEEC-----SSTH--HHHHHHHHHHHHH---
T ss_pred HHHHHHHHH----hcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEEC-----CCch--HHHHHHHHHHhhh---
Confidence 566665554 4578899999999999999999999999999965778877 2111 3333323221111
Q ss_pred hhhhhhccCC-ceEeCCCCc---c--ccccceeecCCCcCc--cchh----hHHhhhhcCCeEEEecCCCCCCHHHHHHH
Q 007820 476 LRDYSKTYAR-SKYYDEAKP---W--NERCDVAFPCASQNE--IDQS----DAINLVNSGCRILVEGSNMPCTPEAVDVL 543 (588)
Q Consensus 476 L~~y~~~~p~-a~~i~~~ei---l--~~dcDILIPcA~~n~--It~e----nA~~l~~~~akiVvEgAN~P~T~eA~~iL 543 (588)
.++. ...++-+++ - -.++||+|-|+.-+. .+.. +...| ....+|.+-.-+|....-.+.-
T Consensus 198 ------~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l--~~~~~v~D~vY~P~~T~ll~~A 269 (312)
T 3t4e_A 198 ------NTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLL--RPELLVTECVYNPHMTKLLQQA 269 (312)
T ss_dssp ------HSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGS--CTTCEEEECCCSSSSCHHHHHH
T ss_pred ------ccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHc--CCCCEEEEeccCCCCCHHHHHH
Confidence 0110 112222221 1 137899997765432 1111 12233 2567899999998533344445
Q ss_pred HHCCceEec
Q 007820 544 KKANVLIAP 552 (588)
Q Consensus 544 ~~rGI~viP 552 (588)
+++|..++.
T Consensus 270 ~~~G~~~~~ 278 (312)
T 3t4e_A 270 QQAGCKTID 278 (312)
T ss_dssp HHTTCEEEC
T ss_pred HHCCCeEEC
Confidence 677765543
No 82
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.12 E-value=0.0064 Score=62.04 Aligned_cols=113 Identities=20% Similarity=0.249 Sum_probs=71.4
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ei 494 (588)
.||+|+|+|++|...++.|.+. ++.+++|+|. |.+.+..+.+ . +.-.... +.+++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~~~---~----------~~~~~~~~~~~~l 59 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV----------REDRLREMKE---K----------LGVEKAYKDPHEL 59 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS----------CHHHHHHHHH---H----------HTCSEEESSHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC----------CHHHHHHHHH---H----------hCCCceeCCHHHH
Confidence 5899999999999999988774 7899999987 3333321211 1 1111122 22344
Q ss_pred cc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 495 l~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
+. .++|+++-|. .+..+.+.+...++.+..+++|=-=.....++. +..+++|+.+...
T Consensus 60 l~~~~~D~V~i~t-p~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 60 IEDPNVDAVLVCS-STNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp HHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred hcCCCCCEEEEcC-CCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 43 4899999776 455677777777788999999851111123333 4446677766544
No 83
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.10 E-value=0.013 Score=64.16 Aligned_cols=108 Identities=13% Similarity=0.170 Sum_probs=67.8
Q ss_pred HhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 409 ~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
..+.++.|++|.|.|+|+||+.+|+.|...|++|+ +.|. + .... +.. .. .+.+.
T Consensus 270 ~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~-v~d~-------~---~~~~--~~a-~~------------~G~~~ 323 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVW-VTEI-------D---PICA--LQA-AM------------EGYRV 323 (494)
T ss_dssp HHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECS-------C---HHHH--HHH-HT------------TTCEE
T ss_pred ccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC-------C---hHhH--HHH-HH------------cCCEe
Confidence 35778999999999999999999999999999964 4444 2 2111 011 00 02222
Q ss_pred eCCCCccccccceeecC-CCcCccchhhHHhhhhcCCeEEEecCCCCC--CHHHHHHHHH
Q 007820 489 YDEAKPWNERCDVAFPC-ASQNEIDQSDAINLVNSGCRILVEGSNMPC--TPEAVDVLKK 545 (588)
Q Consensus 489 i~~~eil~~dcDILIPc-A~~n~It~enA~~l~~~~akiVvEgAN~P~--T~eA~~iL~~ 545 (588)
.+-+++ -..|||++-| .+.+.|+.+....+ +.++ +|+.-|-+++ ..++.+.|.+
T Consensus 324 ~~l~el-l~~aDiVi~~~~t~~lI~~~~l~~M-K~gA-ilINvgrg~veID~~aL~AL~~ 380 (494)
T 3d64_A 324 VTMEYA-ADKADIFVTATGNYHVINHDHMKAM-RHNA-IVCNIGHFDSEIDVASTRQYQW 380 (494)
T ss_dssp CCHHHH-TTTCSEEEECSSSSCSBCHHHHHHC-CTTE-EEEECSSSSCSBCCGGGTTSEE
T ss_pred CCHHHH-HhcCCEEEECCCcccccCHHHHhhC-CCCc-EEEEcCCCcchhchHHHHhhhc
Confidence 211122 2379999988 45678888877766 3344 5566666654 5554444443
No 84
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.10 E-value=0.011 Score=60.53 Aligned_cols=113 Identities=14% Similarity=0.199 Sum_probs=73.2
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~--GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
+-.||+|+|+|++|...++.|.+. ++.+++|+|. |.+++..+.+ . + +....++
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~~~~~~---~----------~-~~~~~~~~ 67 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDI----------DPAALKAAVE---R----------T-GARGHASL 67 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS----------SHHHHHHHHH---H----------H-CCEEESCH
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC----------CHHHHHHHHH---H----------c-CCceeCCH
Confidence 346999999999999989988886 7899999987 3333321211 1 1 1222222
Q ss_pred CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCC-HHHH---HHHHHCCceEecc
Q 007820 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 492 ~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~---~iL~~rGI~viPD 553 (588)
++++. .++|+++-|.. +..+.+.+...++.+..+++|=-= -.| .++. +..+++|+.+...
T Consensus 68 ~~ll~~~~~D~V~i~tp-~~~h~~~~~~al~~gk~v~~EKP~-a~~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTP-SGLHPTQSIECSEAGFHVMTEKPM-ATRWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp HHHHHHCCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSSS-CSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHhcCCCCCEEEECCC-cHHHHHHHHHHHHCCCCEEEeCCC-cCCHHHHHHHHHHHHHhCCeEEEE
Confidence 34553 58999997664 556777788788889999998521 123 3343 3446677766533
No 85
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.09 E-value=0.031 Score=51.46 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=66.1
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY- 489 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i- 489 (588)
.++.+.+|+|.|+|.+|+.+|+.|.+. |..|+.+ |. |.+++..+. .. + ...+
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vi-d~----------~~~~~~~~~---~~-g-----------~~~~~ 88 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGI-EI----------REEAAQQHR---SE-G-----------RNVIS 88 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEE-ES----------CHHHHHHHH---HT-T-----------CCEEE
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEE-EC----------CHHHHHHHH---HC-C-----------CCEEE
Confidence 357788999999999999999999999 9986544 54 233332221 11 1 1111
Q ss_pred -CC--CCcc-----ccccceeecCCCcCccchhh---HHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce--Eeccc
Q 007820 490 -DE--AKPW-----NERCDVAFPCASQNEIDQSD---AINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL--IAPAM 554 (588)
Q Consensus 490 -~~--~eil-----~~dcDILIPcA~~n~It~en---A~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~--viPD~ 554 (588)
+. .+.+ -.++|++|-|......+..- +..+ ....++|+-. | +++..+.|.+.|+. +.|..
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~-~~~~~ii~~~-~---~~~~~~~l~~~G~~~vi~p~~ 161 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRR-NYKGQIAAIA-E---YPDQLEGLLESGVDAAFNIYS 161 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHT-TCCSEEEEEE-S---SHHHHHHHHHHTCSEEEEHHH
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHH-CCCCEEEEEE-C---CHHHHHHHHHcCCCEEEchHH
Confidence 11 1111 13789999877654433332 2222 1256777753 3 35666788888874 34544
No 86
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.09 E-value=0.036 Score=49.95 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=62.9
Q ss_pred hCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
+...+.+++|+|.|+|.+|+.+|+.|.+.|.+|+.+ |. +++ .+ ...+... +...+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vi-d~-----~~~-----~~---~~~~~~~-----------g~~~~ 67 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVV-DK-----NEY-----AF---HRLNSEF-----------SGFTV 67 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEE-ES-----CGG-----GG---GGSCTTC-----------CSEEE
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE-EC-----CHH-----HH---HHHHhcC-----------CCcEE
Confidence 445778899999999999999999999999986544 44 221 11 0000000 11111
Q ss_pred CCC----Ccc----ccccceeecCCCcCccchhhHHhhhh-cCCeEEEecCCCCCCHHHHHHHHHCCce
Q 007820 490 DEA----KPW----NERCDVAFPCASQNEIDQSDAINLVN-SGCRILVEGSNMPCTPEAVDVLKKANVL 549 (588)
Q Consensus 490 ~~~----eil----~~dcDILIPcA~~n~It~enA~~l~~-~~akiVvEgAN~P~T~eA~~iL~~rGI~ 549 (588)
..+ +.+ -.++|++|-|......+..-+..+.. .+...|+--+|.+.. .+.|++.|+.
T Consensus 68 ~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~---~~~l~~~G~~ 133 (155)
T 2g1u_A 68 VGDAAEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYDPEK---IKIFEENGIK 133 (155)
T ss_dssp ESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGGG---HHHHHTTTCE
T ss_pred EecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHHH---HHHHHHCCCc
Confidence 110 111 13789999988765554433332222 355555556676654 3567777765
No 87
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.08 E-value=0.017 Score=58.99 Aligned_cols=35 Identities=29% Similarity=0.294 Sum_probs=31.3
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~-~dr 155 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRG-FSR 155 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE-ECC
Confidence 68999999999999999999999999999654 454
No 88
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.08 E-value=0.021 Score=59.70 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=63.3
Q ss_pred cEEEEeccchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh----c--cCC--
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~----~--~p~-- 485 (588)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|++.+..|+......|.+..-.. . ..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~---------~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~ 73 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC---------CCHHHHHHHhccccccCCCCCcEEEcCCeeeecCce
Confidence 4899999999999999999886 3789999874 255555445544333333211100 0 001
Q ss_pred ceEeC---CCC-ccc-cccceeecCCCcCccchhhHHhhhhcCCe
Q 007820 486 SKYYD---EAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (588)
Q Consensus 486 a~~i~---~~e-il~-~dcDILIPcA~~n~It~enA~~l~~~~ak 525 (588)
..... +++ .|. ..|||+|.|+. .-.+.+.|...++.+||
T Consensus 74 i~v~~~~dp~~l~w~~~~vDvV~e~tg-~~~s~e~a~~~l~~Gak 117 (339)
T 3b1j_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTG-VFVTAEGASKHIQAGAK 117 (339)
T ss_dssp EEEECCSCGGGSCTTTTTCCEEEECSS-SCCBHHHHHHHHHTTCS
T ss_pred EEEEecCChHHCcccccCCCEEEECCC-ccccHHHHHHHHHcCCc
Confidence 11111 122 364 58999999974 45677888888888998
No 89
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.06 E-value=0.022 Score=59.08 Aligned_cols=111 Identities=15% Similarity=0.195 Sum_probs=67.9
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+ ++-.. +....+
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~-~~dr~-----~~~~~-------------------------g~~~~~ 207 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAFDCPIS-YFSRS-----KKPNT-------------------------NYTYYG 207 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEE-EECSS-----CCTTC-------------------------CSEEES
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EECCC-----chhcc-------------------------CceecC
Confidence 458999999999999999999999999999964 44542 11000 011111
Q ss_pred C-CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHH-HHHHHHHCCce-Eecccc
Q 007820 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPE-AVDVLKKANVL-IAPAMA 555 (588)
Q Consensus 491 ~-~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~e-A~~iL~~rGI~-viPD~l 555 (588)
+ ++ +-.+|||++-|.. .+.|+.+....+ +.++ +|+.-+.++ ++.+ ..+.|.+.+|. ..-|+.
T Consensus 208 ~l~e-ll~~aDvVil~vP~~~~t~~li~~~~l~~m-k~ga-ilIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~ 278 (333)
T 3ba1_A 208 SVVE-LASNSDILVVACPLTPETTHIINREVIDAL-GPKG-VLINIGRGPHVDEPELVSALVEGRLGGAGLDVF 278 (333)
T ss_dssp CHHH-HHHTCSEEEECSCCCGGGTTCBCHHHHHHH-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSCEEEESCC
T ss_pred CHHH-HHhcCCEEEEecCCChHHHHHhhHHHHhcC-CCCC-EEEECCCCchhCHHHHHHHHHcCCCeEEEEecC
Confidence 1 11 1237898887754 456665555554 4455 556667765 4444 45777776664 333443
No 90
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.05 E-value=0.019 Score=57.23 Aligned_cols=117 Identities=14% Similarity=0.145 Sum_probs=67.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++..+.+ . +....+..+-.-
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V-~~~d~----------~~~~~~~~~~---~------------g~~~~~~~~~~~ 57 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL-NVFDL----------VQSAVDGLVA---A------------GASAARSARDAV 57 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHHHH---T------------TCEECSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHHH---C------------CCeEcCCHHHHH
Confidence 58999999999999999999999985 45565 2334322221 1 122211111112
Q ss_pred cccceeecCCCcCccchhhHH---hhhh--cCCeEEEecCCCC-CC-HHHHHHHHHCCceEeccccccccCc
Q 007820 497 ERCDVAFPCASQNEIDQSDAI---NLVN--SGCRILVEGSNMP-CT-PEAVDVLKKANVLIAPAMAAGAGGV 561 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA~---~l~~--~~akiVvEgAN~P-~T-~eA~~iL~~rGI~viPD~laNAGGV 561 (588)
.+||++|-|........+... .+.+ ..-++|+.-.+.+ .+ .+..+.+.++|+.|+.- -+.||.
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~--pv~~~~ 127 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA--PVSGGT 127 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC--CEESCH
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE--EccCCh
Confidence 378999998865432222222 2221 1224566655553 33 45567788889888752 455554
No 91
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=96.05 E-value=0.019 Score=58.49 Aligned_cols=114 Identities=17% Similarity=0.111 Sum_probs=71.9
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
....++|.|.|+|++|...++.|.+. |.+-|.|.|. +.++...+.+ ..+. .....+.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr----------~~~~~~~l~~---~~~~---------~~~~~~~ 189 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR----------TKENAEKFAD---TVQG---------EVRVCSS 189 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS----------SHHHHHHHHH---HSSS---------CCEECSS
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------CHHHHHHHHH---HhhC---------CeEEeCC
Confidence 45678999999999999999998876 8755777765 3344322222 1110 0111111
Q ss_pred -CCccccccceeecCCCc--CccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEecc
Q 007820 492 -AKPWNERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPA 553 (588)
Q Consensus 492 -~eil~~dcDILIPcA~~--n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD 553 (588)
++.. .+|||++-|... ..+.. ..++.++-++.-|.+.|-..|..+.+.++|+.|+-+
T Consensus 190 ~~e~v-~~aDiVi~atp~~~~v~~~----~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~ 249 (312)
T 2i99_A 190 VQEAV-AGADVIITVTLATEPILFG----EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDS 249 (312)
T ss_dssp HHHHH-TTCSEEEECCCCSSCCBCG----GGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESC
T ss_pred HHHHH-hcCCEEEEEeCCCCcccCH----HHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECC
Confidence 1112 368999877653 23332 223557778877889887667667788889877754
No 92
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=96.03 E-value=0.021 Score=60.60 Aligned_cols=99 Identities=15% Similarity=0.230 Sum_probs=63.5
Q ss_pred cEEEEeccchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh----c--cCC--
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~----~--~p~-- 485 (588)
.||+|.|||.+|+.+++.|.+. ...||+|.|. .|.+.+..|+.+....|.+..-.. . ..+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~---------~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~ 73 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT---------SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKT 73 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS---------SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC---------CCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeE
Confidence 4899999999999999999876 3789999874 355555555554443333211100 0 001
Q ss_pred ceEeCC---CC-ccc-cccceeecCCCcCccchhhHHhhhhcCCe
Q 007820 486 SKYYDE---AK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (588)
Q Consensus 486 a~~i~~---~e-il~-~dcDILIPcA~~n~It~enA~~l~~~~ak 525 (588)
...... ++ .|. ..+||+|.|+. .-.+.+.|...++.|||
T Consensus 74 i~v~~~~dp~~l~w~~~gvDvV~e~TG-~f~s~e~a~~hl~aGak 117 (380)
T 2d2i_A 74 MKIVCDRNPLNLPWKEWDIDLVIESTG-VFVTAEGASKHIQAGAK 117 (380)
T ss_dssp EEEECCSCGGGCCHHHHTCCEEEECSS-SCCBHHHHHHHHHTTCS
T ss_pred EEEEecCChHHCCcccCCCCEEEECCC-ccccHHHHHHHHHcCCc
Confidence 111111 22 353 58999999975 44667888888888998
No 93
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.03 E-value=0.018 Score=58.63 Aligned_cols=113 Identities=11% Similarity=0.179 Sum_probs=66.1
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
..+.++|.|.|+|++|..+|+.|.+.|..| .+.|. +.+++..+. +. ++...+..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V-~~~dr----------~~~~~~~l~---~~------------g~~~~~~~ 81 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYAL-QVWNR----------TPARAASLA---AL------------GATIHEQA 81 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHH---TT------------TCEEESSH
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHH---HC------------CCEeeCCH
Confidence 346689999999999999999999999985 45565 333432221 11 12222211
Q ss_pred CccccccceeecCCCcCccchhhHH--hh---hhcCCeEEEecCCC-CC-CHHHHHHHHHCCceEec
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAI--NL---VNSGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~--~l---~~~~akiVvEgAN~-P~-T~eA~~iL~~rGI~viP 552 (588)
+-.-.+|||+|-|........+... .+ +..+ ++|+.-++. |. +.+..+.+.++|+.|+.
T Consensus 82 ~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 82 RAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPG-SLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp HHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 1112478999988875432222211 11 1223 455555554 43 34556778899998874
No 94
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.03 E-value=0.026 Score=49.72 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=63.3
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe--C--
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY--D-- 490 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i--~-- 490 (588)
+.++|+|.|+|.+|+.+|+.|.+.|..|+.+ |. |.+.+..+. .. + ...+ +
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~i-d~----------~~~~~~~~~---~~-~-----------~~~~~gd~~ 58 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAV-DK----------SKEKIELLE---DE-G-----------FDAVIADPT 58 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEE-ES----------CHHHHHHHH---HT-T-----------CEEEECCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEE-EC----------CHHHHHHHH---HC-C-----------CcEEECCCC
Confidence 4578999999999999999999999997644 54 333432222 11 1 1111 1
Q ss_pred CCCcc----ccccceeecCCCcCccc---hhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCc--eEeccc
Q 007820 491 EAKPW----NERCDVAFPCASQNEID---QSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV--LIAPAM 554 (588)
Q Consensus 491 ~~eil----~~dcDILIPcA~~n~It---~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI--~viPD~ 554 (588)
..+.| -.++|++|-|......+ ...+..+ ...++|+-.. +++..+.|++.|+ .+.|..
T Consensus 59 ~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~--~~~~iia~~~----~~~~~~~l~~~G~~~vi~p~~ 125 (141)
T 3llv_A 59 DESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSV--SDVYAIVRVS----SPKKKEEFEEAGANLVVLVAD 125 (141)
T ss_dssp CHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHH--CCCCEEEEES----CGGGHHHHHHTTCSEEEEHHH
T ss_pred CHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHh--CCceEEEEEc----ChhHHHHHHHcCCCEEECHHH
Confidence 11122 13789999887643333 3344444 2456666443 2344577888887 345543
No 95
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.02 E-value=0.0093 Score=61.36 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=74.5
Q ss_pred CCCcEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-C
Q 007820 414 LKGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-D 490 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~ 490 (588)
.+-.||+|+|+|++|. ..++.|.+. ++++++|+|. |.++...+.+ .+ +.... +
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a~-------------~~-g~~~~~~ 80 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR----------RWDRAKRFTE-------------RF-GGEPVEG 80 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES----------SHHHHHHHHH-------------HH-CSEEEES
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC----------CHHHHHHHHH-------------Hc-CCCCcCC
Confidence 3457999999999998 678888776 7899999987 3333321111 11 12222 2
Q ss_pred CCCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEeccc
Q 007820 491 EAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPAM 554 (588)
Q Consensus 491 ~~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD~ 554 (588)
.++++ ..++|+++-|. .+..+.+.+...++.+..++||=-=.....++. +..+++|+.+...+
T Consensus 81 ~~~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 147 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPL-PAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF 147 (350)
T ss_dssp HHHHHTCTTCSEEEECC-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHhcCCCCCEEEECC-CcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 23455 35789998765 566778888888888999999952111224444 44467788765443
No 96
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.02 E-value=0.011 Score=60.02 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=69.8
Q ss_pred CcEEEEeccchHHH-HHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 416 GLRCVVSGSGKIAM-HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 416 GkrVaIQGfGNVG~-~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
-.||+|+|+|++|. ..+..|...|+++++|+|. +++-. ++ +. +.|++....++ ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~-----~~~~~--~~---~a-------------~~~~~~~~~~~~~~ 60 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES-----DSDNR--AK---FT-------------SLFPSVPFAASAEQ 60 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS-----CTTSC--HH---HH-------------HHSTTCCBCSCHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC-----CHHHH--HH---HH-------------HhcCCCcccCCHHH
Confidence 46999999999996 4666676779999999998 44422 11 11 11222222222 34
Q ss_pred ccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHHH---HHHHCCceEe
Q 007820 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIA 551 (588)
Q Consensus 494 il~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGI~vi 551 (588)
++. .++|+++-|+. +..+.+.+...++.+..+++|= |+ | .++.+ ..+++|+.+.
T Consensus 61 ll~~~~~D~V~i~tp-~~~h~~~~~~al~aGkhVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 61 LITDASIDLIACAVI-PCDRAELALRTLDAGKDFFTAK---PPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp HHTCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HhhCCCCCEEEEeCC-hhhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 453 47999987764 5567788887778888899983 43 3 34443 3356777664
No 97
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.02 E-value=0.018 Score=60.55 Aligned_cols=105 Identities=16% Similarity=0.276 Sum_probs=64.9
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~--a~ 487 (588)
.||+|.|||-+|+-+++.|.+. ...||+|.|.. .|.+.+..++.+....|.+....+. ..+ .+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~--------~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPF--------MDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVK 89 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTT--------SCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCC--------CChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEE
Confidence 4999999999999999999886 68999999821 2444333333333333333221100 000 11
Q ss_pred Ee---CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEec
Q 007820 488 YY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (588)
Q Consensus 488 ~i---~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (588)
.+ ++++ .| +..|||+|.|+ ..-.+.+.|..+++.||| +|+.+
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eat-g~~~s~e~a~~~l~~GakkvVId~ 137 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCEST-GVFTTEEKASLHLKGGAKKVIISA 137 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECS-SSCCSHHHHGGGGTTTCSEEEESS
T ss_pred EEecCChHHCCcccCCCCEEEECC-CchhhHHHHHHHHHcCCcEEEEeC
Confidence 22 1222 35 36899999986 455678888888888884 55544
No 98
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.02 E-value=0.022 Score=60.60 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=67.2
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.+|.|+||.|.|+|++|+.+|+.|...|.+|++ .|. ..-..+.. .. + ++....
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~-~d~-------~~~~~~~~---~~----------~-----G~~~~~ 239 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY-TDR-------HRLPESVE---KE----------L-----NLTWHA 239 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE-ECS-------SCCCHHHH---HH----------H-----TCEECS
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE-EcC-------CccchhhH---hh----------c-----CceecC
Confidence 5689999999999999999999999999999753 343 22222110 00 0 122211
Q ss_pred -CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 -EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 -~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.+++ -..|||++-|.. .+.|+.+....+ +.+ .+|+.-|-++ +..+| .+.|++..|.
T Consensus 240 ~l~el-l~~aDvV~l~~Plt~~t~~li~~~~l~~m-k~g-ailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 240 TREDM-YPVCDVVTLNCPLHPETEHMINDETLKLF-KRG-AYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp SHHHH-GGGCSEEEECSCCCTTTTTCBSHHHHTTS-CTT-EEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred CHHHH-HhcCCEEEEecCCchHHHHHhhHHHHhhC-CCC-CEEEECCCchHhhHHHHHHHHHcCCee
Confidence 1122 247899987754 466766555554 334 4566666665 55544 4667665554
No 99
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.01 E-value=0.0084 Score=61.90 Aligned_cols=115 Identities=16% Similarity=0.200 Sum_probs=73.4
Q ss_pred CCCcEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 414 LKGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
++-.||+|+|+|++|. +.++.|.+. ++++++|+|. |.+++ . .+.+.+++....++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------~~~~~---~----------~~a~~~~~~~~~~~ 59 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS----------DLERA---R----------RVHRFISDIPVLDN 59 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS----------SHHHH---G----------GGGGTSCSCCEESS
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHH---H----------HHHHhcCCCcccCC
Confidence 3457999999999998 478888775 7899999987 33332 1 12222333333333
Q ss_pred -CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEec
Q 007820 492 -AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAP 552 (588)
Q Consensus 492 -~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viP 552 (588)
++++. .++|+++-|.. +..+.+.+...++.|..++||=-=.....++. +..+++|+.+.-
T Consensus 60 ~~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v 124 (359)
T 3m2t_A 60 VPAMLNQVPLDAVVMAGP-PQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGV 124 (359)
T ss_dssp HHHHHHHSCCSEEEECSC-HHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 44553 57899997664 56677888888888999999841111223444 344667876543
No 100
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.00 E-value=0.015 Score=58.68 Aligned_cols=111 Identities=16% Similarity=0.199 Sum_probs=68.3
Q ss_pred cEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCc
Q 007820 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ei 494 (588)
.||+|+|+|++|. ..++.|.+. +++++ |+|. +.+++..+.+ ..+ + + ..+.+..+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~----------~~~~~~~~a~---~~g-~-------~-~~~~~~~~~ 59 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR----------NPKVLGTLAT---RYR-V-------S-ATCTDYRDV 59 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS----------CHHHHHHHHH---HTT-C-------C-CCCSSTTGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC----------CHHHHHHHHH---HcC-C-------C-ccccCHHHH
Confidence 5899999999998 478877764 77888 9987 3334322211 111 0 0 002233344
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCH-HHH---HHHHHCCceEec
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAV---DVLKKANVLIAP 552 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~---~iL~~rGI~viP 552 (588)
+..++|+++-|.. +....+.+...++.+..+++|-- +.+|. ++. +..+++|+.+..
T Consensus 60 l~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~V~~EKP-~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 60 LQYGVDAVMIHAA-TDVHSTLAAFFLHLGIPTFVDKP-LAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp GGGCCSEEEECSC-GGGHHHHHHHHHHTTCCEEEESC-SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hhcCCCEEEEECC-chhHHHHHHHHHHCCCeEEEeCC-CcCCHHHHHHHHHHHHhcCCeEEE
Confidence 4568999998876 55667777777777888999841 11233 333 344567876653
No 101
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.00 E-value=0.025 Score=62.02 Aligned_cols=109 Identities=20% Similarity=0.223 Sum_probs=66.6
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|++|.|+|+|++|+.+|+.|...|.+|++ .|. .. +.+.. .+ . ++...+
T Consensus 137 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~-~d~-------~~-~~~~a---~~----------~-----g~~~~~ 189 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVA-YDP-------YV-SPARA---AQ----------L-----GIELLS 189 (529)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE-ECT-------TS-CHHHH---HH----------H-----TCEECC
T ss_pred ccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEE-ECC-------CC-ChhHH---Hh----------c-----CcEEcC
Confidence 4579999999999999999999999999999754 343 22 22211 10 0 222221
Q ss_pred CCCccccccceeecCC-----CcCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCA-----SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA-----~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.+++ -..||+++-|. +.+.|+.+....+ +.++ +|+.-|-++ ++.++ .+.|.+.+|.
T Consensus 190 l~e~-~~~aDvV~l~~P~~~~t~~~i~~~~~~~~-k~g~-ilin~arg~iv~~~aL~~al~~g~i~ 252 (529)
T 1ygy_A 190 LDDL-LARADFISVHLPKTPETAGLIDKEALAKT-KPGV-IIVNAARGGLVDEAALADAITGGHVR 252 (529)
T ss_dssp HHHH-HHHCSEEEECCCCSTTTTTCBCHHHHTTS-CTTE-EEEECSCTTSBCHHHHHHHHHTSSEE
T ss_pred HHHH-HhcCCEEEECCCCchHHHHHhCHHHHhCC-CCCC-EEEECCCCchhhHHHHHHHHHcCCcc
Confidence 1112 23799998885 4566666555444 3344 556666665 45444 3667665553
No 102
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.99 E-value=0.0097 Score=61.56 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=72.0
Q ss_pred CcEEEEeccchHHH-HHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 416 GLRCVVSGSGKIAM-HVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 416 GkrVaIQGfGNVG~-~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
-.||+|+|+|.++. ..+..|...++++++|+|. |.++...+. +.|+.....++ ++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~----------~~~~a~~~a-------------~~~~~~~~~~~~~~ 82 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEK----------DDALAAEFS-------------AVYADARRIATAEE 82 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECS----------CHHHHHHHH-------------HHSSSCCEESCHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcC----------CHHHHHHHH-------------HHcCCCcccCCHHH
Confidence 46999999999985 4566677789999999997 333432111 12222222222 44
Q ss_pred ccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHH---HHHHCCceEe
Q 007820 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIA 551 (588)
Q Consensus 494 il~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGI~vi 551 (588)
++. .++|+++=|+ .+..+.+.+...++.|..++||=-=.....++.+ ..+++|+.+.
T Consensus 83 ll~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~ 143 (361)
T 3u3x_A 83 ILEDENIGLIVSAA-VSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFS 143 (361)
T ss_dssp HHTCTTCCEEEECC-CHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEE
T ss_pred HhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 554 4799999655 5667888888888889999999521122244443 3456777654
No 103
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.99 E-value=0.057 Score=48.00 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=66.6
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC----C
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE----A 492 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~----~ 492 (588)
.+|+|.|+|.+|+.+|+.|.+.|..|+.| |. |.+.+..+.+ . +...+.+ .
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vi-d~----------~~~~~~~~~~---~------------g~~~i~gd~~~~ 61 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVI-ET----------SRTRVDELRE---R------------GVRAVLGNAANE 61 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEE-ES----------CHHHHHHHHH---T------------TCEEEESCTTSH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE-EC----------CHHHHHHHHH---c------------CCCEEECCCCCH
Confidence 47999999999999999999999996544 54 3334322221 1 1111111 1
Q ss_pred Cccc----cccceeecCCCcCccch---hhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce--Eeccc
Q 007820 493 KPWN----ERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL--IAPAM 554 (588)
Q Consensus 493 eil~----~dcDILIPcA~~n~It~---enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~--viPD~ 554 (588)
+.|. .++|++|-|......+. ..+..+ ...+++|+-.- +++..+.|++.|+- +.|..
T Consensus 62 ~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~-~~~~~iiar~~----~~~~~~~l~~~G~d~vi~p~~ 127 (140)
T 3fwz_A 62 EIMQLAHLECAKWLILTIPNGYEAGEIVASARAK-NPDIEIIARAH----YDDEVAYITERGANQVVMGER 127 (140)
T ss_dssp HHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH-CSSSEEEEEES----SHHHHHHHHHTTCSEEEEHHH
T ss_pred HHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH-CCCCeEEEEEC----CHHHHHHHHHCCCCEEECchH
Confidence 1231 37899998877655443 333333 34678888653 45677899999974 44543
No 104
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.98 E-value=0.014 Score=59.84 Aligned_cols=52 Identities=25% Similarity=0.403 Sum_probs=44.3
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
...|.+|++. +|++.+.+++|++|+|.|.|+ ||..+|.+|...||+ |+|+.+
T Consensus 141 ~PcTp~gv~~----lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt-Vtv~hs 193 (286)
T 4a5o_A 141 RPCTPKGIMT----LLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCT-VTVTHR 193 (286)
T ss_dssp CCHHHHHHHH----HHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCHHHHHH----HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeC
Confidence 4589988754 566678999999999999877 999999999999998 577765
No 105
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.98 E-value=0.015 Score=59.94 Aligned_cols=109 Identities=12% Similarity=0.130 Sum_probs=65.3
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|. +++ .+. ... + ++.+.+
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~-~~d~-----~~~---~~~---~~~----------~-----g~~~~~ 197 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRIL-YYSR-----TRK---EEV---ERE----------L-----NAEFKP 197 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS-----SCC---HHH---HHH----------H-----CCEECC
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEE-EECC-----Ccc---hhh---Hhh----------c-----CcccCC
Confidence 457999999999999999999999999999965 4444 221 111 111 0 112211
Q ss_pred CCCccccccceeecCCCc-----CccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCASQ-----NEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~-----n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.+++ -.+|||++-|... +.++.+....+ +.++ +|+.-+.++ ++.++ .+.|.+.+|.
T Consensus 198 l~~~-l~~aDvVil~vp~~~~t~~~i~~~~~~~m-k~~a-ilIn~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 198 LEDL-LRESDFVVLAVPLTRETYHLINEERLKLM-KKTA-ILINIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp HHHH-HHHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTC-EEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHH-HhhCCEEEECCCCChHHHHhhCHHHHhcC-CCCc-EEEECCCCcccCHHHHHHHHHhCCee
Confidence 1111 2378999887654 34554444444 3455 455666665 55444 4677775553
No 106
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=95.98 E-value=0.013 Score=61.78 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=69.4
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ ||+.. +.+.. .. .++++.+
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~--------~d~~~-~~~~~---~~---------------~g~~~~~ 223 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRV--------FDPWL-PRSML---EE---------------NGVEPAS 223 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEE--------ECSSS-CHHHH---HH---------------TTCEECC
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhhCCCEEEE--------ECCCC-CHHHH---hh---------------cCeeeCC
Confidence 5689999999999999999999999999999764 34432 22211 10 0222221
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCceEeccc
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVLIAPAM 554 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~viPD~ 554 (588)
-+++ -..|||++-|.. .+.|+.+....+ +.++ +++.-|-++ +..+| .+.|++..|..+=|.
T Consensus 224 l~el-l~~aDvV~l~~Plt~~T~~li~~~~l~~m-k~ga-ilIN~aRG~~vde~aL~~aL~~g~i~aaLDV 291 (365)
T 4hy3_A 224 LEDV-LTKSDFIFVVAAVTSENKRFLGAEAFSSM-RRGA-AFILLSRADVVDFDALMAAVSSGHIVAASDV 291 (365)
T ss_dssp HHHH-HHSCSEEEECSCSSCC---CCCHHHHHTS-CTTC-EEEECSCGGGSCHHHHHHHHHTTSSEEEESC
T ss_pred HHHH-HhcCCEEEEcCcCCHHHHhhcCHHHHhcC-CCCc-EEEECcCCchhCHHHHHHHHHcCCceEEeeC
Confidence 1122 247899986644 456777666655 4454 556666665 55555 467776666533333
No 107
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.97 E-value=0.018 Score=58.25 Aligned_cols=114 Identities=11% Similarity=0.047 Sum_probs=67.5
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
..+..++|.|+|+|++|..+|+.|.+.|..| .+.|. +.+++..+.+ . ++...+.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V-~~~dr----------~~~~~~~~~~---~------------g~~~~~~ 58 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRV-AIWNR----------SPGKAAALVA---A------------GAHLCES 58 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHH---H------------TCEECSS
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHH---C------------CCeecCC
Confidence 3556789999999999999999999999985 45565 3344332222 1 1221111
Q ss_pred CCccccccceeecCCCcCccchh-----hHHhhhhcCCeEEEecCCC-CCC-HHHHHHHHHCCceEecc
Q 007820 492 AKPWNERCDVAFPCASQNEIDQS-----DAINLVNSGCRILVEGSNM-PCT-PEAVDVLKKANVLIAPA 553 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n~It~e-----nA~~l~~~~akiVvEgAN~-P~T-~eA~~iL~~rGI~viPD 553 (588)
..-.-.+|||+|-|...+....+ ....+ ..+ ++|+.-++. |.+ .+..+.+.++|+.|+..
T Consensus 59 ~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~-~~g-~ivid~st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 59 VKAALSASPATIFVLLDNHATHEVLGMPGVARA-LAH-RTIVDYTTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp HHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHH-TTT-CEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHHhcccchhhc-cCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 11112368999988765432111 22222 224 455555554 433 34557788999998754
No 108
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.97 E-value=0.012 Score=60.40 Aligned_cols=113 Identities=15% Similarity=0.068 Sum_probs=72.7
Q ss_pred CcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~e 493 (588)
-.||+|+|+|++|...++.|.+. ++++++|+|. |.+++..+.+ . | +.... +.++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~----------~~~~~~~~~~---~------~-----g~~~~~~~~~ 60 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR----------TEDKREKFGK---R------Y-----NCAGDATMEA 60 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS----------SHHHHHHHHH---H------H-----TCCCCSSHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC----------CHHHHHHHHH---H------c-----CCCCcCCHHH
Confidence 36899999999999999988876 8999999987 3334321211 1 1 11111 1233
Q ss_pred cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 494 il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
++ ..++|+++-|.. +..+.+.+...++.+..+++|=-=.....++. +..+++|+.+...
T Consensus 61 ~l~~~~~D~V~i~tp-~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 61 LLAREDVEMVIITVP-NDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp HHHCSSCCEEEECSC-TTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred HhcCCCCCEEEEeCC-hHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 44 357899987764 56677888888888999999952111223444 3346678766543
No 109
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.95 E-value=0.016 Score=59.65 Aligned_cols=110 Identities=14% Similarity=0.144 Sum_probs=66.0
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+++ |.. .. +.+.. .+ + ++.+.+
T Consensus 141 ~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~-d~~------~~-~~~~~---~~----------~-----g~~~~~ 194 (320)
T 1gdh_A 141 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYF-DTH------RA-SSSDE---AS----------Y-----QATFHD 194 (320)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE-CSS------CC-CHHHH---HH----------H-----TCEECS
T ss_pred CcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEE-CCC------Cc-Chhhh---hh----------c-----CcEEcC
Confidence 35799999999999999999999999999997543 320 21 11110 10 0 222221
Q ss_pred C-CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 491 E-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 491 ~-~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
. ++++ ..|||++-|.. .+.|+.+....+ +.++ +|+.-+-++ ++.++ .+.|.+.+|.
T Consensus 195 ~l~ell-~~aDvVil~~p~~~~t~~~i~~~~l~~m-k~ga-ilIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 195 SLDSLL-SVSQFFSLNAPSTPETRYFFNKATIKSL-PQGA-IVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp SHHHHH-HHCSEEEECCCCCTTTTTCBSHHHHTTS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHHH-hhCCEEEEeccCchHHHhhcCHHHHhhC-CCCc-EEEECCCCcccCHHHHHHHHHhCCCc
Confidence 1 1222 37899987755 355655544444 3344 555556564 55554 5777776654
No 110
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.93 E-value=0.0099 Score=61.49 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=65.0
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY- 489 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i- 489 (588)
+.++.|++|.|.|+|++|+.+|+.|...|++|++ .|. .. + +. +.+ + +++.
T Consensus 141 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d~-------~~-~--~~--~~~----------~------~~~~~ 191 (333)
T 1j4a_A 141 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVIT-YDI-------FR-N--PE--LEK----------K------GYYVD 191 (333)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS-------SC-C--HH--HHH----------T------TCBCS
T ss_pred cccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEE-ECC-------Cc-c--hh--HHh----------h------CeecC
Confidence 3578999999999999999999999999999754 443 21 1 10 000 0 0111
Q ss_pred CCCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCC-CCCHHH-HHHHHHCCce
Q 007820 490 DEAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNM-PCTPEA-VDVLKKANVL 549 (588)
Q Consensus 490 ~~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~-P~T~eA-~~iL~~rGI~ 549 (588)
+.++++ ..|||++-|.. .+.|+.+....+ +.++ +++.-+-+ ++..+| .+.|++.+|.
T Consensus 192 ~l~ell-~~aDvV~l~~p~~~~t~~li~~~~l~~m-k~ga-~lIn~arg~~vd~~aL~~aL~~g~i~ 255 (333)
T 1j4a_A 192 SLDDLY-KQADVISLHVPDVPANVHMINDESIAKM-KQDV-VIVNVSRGPLVDTDAVIRGLDSGKIF 255 (333)
T ss_dssp CHHHHH-HHCSEEEECSCCCGGGTTCBSHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CHHHHH-hhCCEEEEcCCCcHHHHHHHhHHHHhhC-CCCc-EEEECCCCcccCHHHHHHHHHhCCce
Confidence 111122 37899887754 345665554554 4455 44545545 455554 4777777765
No 111
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.93 E-value=0.06 Score=46.38 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=27.2
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|+|.|+|.+|+.+|+.|.+.|..|+ +.|.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~-~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIV-LIDI 35 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEE-EEEC
Confidence 5799999999999999999999999865 4454
No 112
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.92 E-value=0.028 Score=58.64 Aligned_cols=103 Identities=16% Similarity=0.286 Sum_probs=65.1
Q ss_pred cEEEEeccchHHHHHHHHHHH---C-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh----c--cCC-
Q 007820 417 LRCVVSGSGKIAMHVLEKLIA---Y-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e---~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~----~--~p~- 485 (588)
.||+|.|||.+|+.+++.|.+ . ...||+|.|. .|.+.+..++++....|.+..-.. . ..+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~ 73 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL---------ADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDD 73 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC---------CCHHHHHHHhcccccCCCCCceEEEcCCeeEECCE
Confidence 489999999999999999988 4 6789999874 255555445543333333221000 0 001
Q ss_pred -ceEe---CCCC-ccc-cccceeecCCCcCccchhhHHhhhhcCCe-EEEe
Q 007820 486 -SKYY---DEAK-PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (588)
Q Consensus 486 -a~~i---~~~e-il~-~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (588)
.+.. ++++ .|. ..+||+|.|+. .-.+.+.|..+++.||| +|+.
T Consensus 74 ~i~v~~~~dp~~l~~~~~~vDvV~e~tg-~~~s~e~a~~~l~~GakkVVId 123 (339)
T 2x5j_O 74 AIRVLHERSLQSLPWRELGVDVVLDCTG-VYGSREHGEAHIAAGAKKVLFS 123 (339)
T ss_dssp EEEEECCSSGGGCCHHHHTCSEEEECSS-SCCSHHHHHHHHHTTCSEEEES
T ss_pred EEEEEecCChHHCcccccCCCEEEECCC-ccccHHHHHHHHHcCCCEEEEe
Confidence 1112 1122 353 48999999874 45677888888888998 4444
No 113
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.91 E-value=0.026 Score=61.59 Aligned_cols=102 Identities=10% Similarity=0.157 Sum_probs=63.8
Q ss_pred hCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
.+..+.|++|.|.|+|+||+.+|+.|...|++|+ +.|. + .... +. ... .+....
T Consensus 251 ~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Vi-v~d~-------~---~~~~--~~-a~~------------~g~~~~ 304 (479)
T 1v8b_A 251 TDFLISGKIVVICGYGDVGKGCASSMKGLGARVY-ITEI-------D---PICA--IQ-AVM------------EGFNVV 304 (479)
T ss_dssp HCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEE-EECS-------C---HHHH--HH-HHT------------TTCEEC
T ss_pred cccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEE-EEeC-------C---hhhH--HH-HHH------------cCCEec
Confidence 4678999999999999999999999999999964 4443 2 2221 01 110 012221
Q ss_pred CCCCccccccceeecC-CCcCccchhhHHhhhhcCCeEEEecCCCCC--CHHHH
Q 007820 490 DEAKPWNERCDVAFPC-ASQNEIDQSDAINLVNSGCRILVEGSNMPC--TPEAV 540 (588)
Q Consensus 490 ~~~eil~~dcDILIPc-A~~n~It~enA~~l~~~~akiVvEgAN~P~--T~eA~ 540 (588)
+-+++ -..|||++-| .+.+.|+.+....+ +.++ +|+.-+-+.+ ..++.
T Consensus 305 ~l~el-l~~aDiVi~~~~t~~lI~~~~l~~M-K~ga-iliNvgrg~~EId~~aL 355 (479)
T 1v8b_A 305 TLDEI-VDKGDFFITCTGNVDVIKLEHLLKM-KNNA-VVGNIGHFDDEIQVNEL 355 (479)
T ss_dssp CHHHH-TTTCSEEEECCSSSSSBCHHHHTTC-CTTC-EEEECSSTTTSBCHHHH
T ss_pred CHHHH-HhcCCEEEECCChhhhcCHHHHhhc-CCCc-EEEEeCCCCccccchhh
Confidence 11122 2479999988 55677887766665 4455 5555555544 44443
No 114
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.91 E-value=0.013 Score=60.30 Aligned_cols=112 Identities=9% Similarity=0.056 Sum_probs=73.7
Q ss_pred CCcEEEEeccchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 415 KGLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~-aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
+-.||+|+|+|++|+. .+..|.+. ++.+++|+|. +++- + .+.+++....++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-----~~~~-----~----------------~~~~~~~~~~~~~ 57 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER-----SKEL-----S----------------KERYPQASIVRSF 57 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS-----SCCG-----G----------------GTTCTTSEEESCS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC-----CHHH-----H----------------HHhCCCCceECCH
Confidence 4479999999999986 67777665 8999999998 3321 1 012233443333
Q ss_pred CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHH---HHHHCCceEecc
Q 007820 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIAPA 553 (588)
Q Consensus 492 ~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGI~viPD 553 (588)
++++. .++|+++-|+ .+..+.+.+...++.+..++||=-=.....|+.+ ..+++|+.+...
T Consensus 58 ~~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNT-PDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVY 122 (362)
T ss_dssp HHHHTCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44553 4799999886 4567788888888899999999422222344443 335667766543
No 115
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=95.89 E-value=0.015 Score=60.97 Aligned_cols=104 Identities=15% Similarity=0.282 Sum_probs=66.4
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~--a~ 487 (588)
.||+|-|||-+|+-+++.|.+. ...||+|.|. .|.+.+..|+++....|.+.+-.+. +.+ .+
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~---------~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~ 73 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVAINDL---------TDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIK 73 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC---------CChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEE
Confidence 4899999999999999998876 6899999984 2555555555544333322110000 001 11
Q ss_pred EeC---CCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEec
Q 007820 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (588)
Q Consensus 488 ~i~---~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (588)
... +++ .| +..+||++.|+ +.-.+.+.|...++.||| +|+-+
T Consensus 74 v~~~~dp~~~~w~~~gvDiV~est-G~~~s~e~a~~hl~aGakkVvisa 121 (342)
T 2ep7_A 74 VFAQKDPSQIPWGDLGVDVVIEAT-GVFRDRENASKHLQGGAKKVIITA 121 (342)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECS-SSCCBHHHHTTTGGGTCSEEEESS
T ss_pred EEEcCChhhCCccccCCCEEEECC-CchhhhhhhHHHHhcCCCEEEecC
Confidence 111 111 35 35899999986 556788888888888996 45544
No 116
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.89 E-value=0.014 Score=62.98 Aligned_cols=135 Identities=17% Similarity=0.069 Sum_probs=81.7
Q ss_pred HHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCC--eEEEEEc----CCCeeeCCCCCCHHHHHHHHHHhhccC
Q 007820 401 FFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSD----AKGYLVDEDGFDYMKISFLRDIKSQQR 474 (588)
Q Consensus 401 ~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GA--KVVaVSD----s~G~IydpdGLDie~L~~L~~~k~~~g 474 (588)
.++..+|+..|.++++++|+|.|.|..|..+++.|.+.|+ +=|.|.| ++|.++..+. .++| ..++.
T Consensus 171 aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~--~~~L---~~~~~--- 242 (439)
T 2dvm_A 171 AGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLD--LEKL---FPYRG--- 242 (439)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSC--HHHH---STTCH---
T ss_pred HHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccc--hhHH---HHHHH---
Confidence 3555566667889999999999999999999999999998 4477888 8887765422 1111 11110
Q ss_pred ChhhhhhccCCceEeCCCCcc--ccccceeecCCCc--CccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceE
Q 007820 475 SLRDYSKTYARSKYYDEAKPW--NERCDVAFPCASQ--NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLI 550 (588)
Q Consensus 475 sL~~y~~~~p~a~~i~~~eil--~~dcDILIPcA~~--n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~v 550 (588)
.|....... ....++. -..+||+|-|+.. +.++.+....+ . .-.+|..-+|-.-|+-..+.. ++|..+
T Consensus 243 ---~~a~~~~~~--~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m-~-~~~iVfDLynP~~t~~~~~A~-~~G~~i 314 (439)
T 2dvm_A 243 ---WLLKKTNGE--NIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKM-N-EDAIVFPLANPVPEILPEEAK-KAGARI 314 (439)
T ss_dssp ---HHHTTSCTT--CCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTS-C-TTCEEEECCSSSCSSCHHHHH-HHTCSE
T ss_pred ---HHhhccccc--cccccHHHHhccCCEEEEcCCCccCCCChHHHHhc-C-CCCEEEECCCCCCcchHHHHH-HcCCeE
Confidence 110000000 0001111 1368999999998 88887665555 2 345888887643333333322 335544
Q ss_pred e
Q 007820 551 A 551 (588)
Q Consensus 551 i 551 (588)
+
T Consensus 315 v 315 (439)
T 2dvm_A 315 V 315 (439)
T ss_dssp E
T ss_pred E
Confidence 3
No 117
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.87 E-value=0.018 Score=59.08 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=72.3
Q ss_pred CcEEEEeccchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 416 GLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 416 GkrVaIQGfGNVG~~-aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
-.||+|+|+|++|.. .+..|.+. ++++++|+|. |.+++ +. .+++....++ +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~----------~~~~~------~~----------~~~~~~~~~~~~ 60 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS----------DASKV------HA----------DWPAIPVVSDPQ 60 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS----------CHHHH------HT----------TCSSCCEESCHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC----------CHHHH------Hh----------hCCCCceECCHH
Confidence 369999999999985 67777765 7899999987 23332 11 1223333332 3
Q ss_pred Cccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 493 eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
+++. .++|+++-|+ .+..+.+.+...++.|..+++|=-=.....++. +..+++|+.+...
T Consensus 61 ~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 124 (352)
T 3kux_A 61 MLFNDPSIDLIVIPT-PNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVF 124 (352)
T ss_dssp HHHHCSSCCEEEECS-CTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4553 4799999877 666788888888888999999842111223444 3446778766543
No 118
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.87 E-value=0.033 Score=58.24 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=69.7
Q ss_pred cEEEEeccchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh-----c--cCCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK-----T--YARS 486 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~-----~--~p~a 486 (588)
.||+|.|||-+|+-+++.|.+. ...||+|.|. .|.+.+..|++.....|....-.. . ..+.
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~---------~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~ 72 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT---------GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGK 72 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT---------TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CCHHHHHHHhcccccCCCccceeEEecCCeEEECCe
Confidence 4899999999999999999886 4688999884 366666555554433333211000 0 1111
Q ss_pred --eEeCCCC----cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 487 --KYYDEAK----PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 487 --~~i~~~e----il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
......+ .| +..|||++.|+ +.-.+.+.|...++.|||.|.=.|-
T Consensus 73 ~i~v~~~~dp~~i~w~~~gvDiV~eat-g~~~s~e~a~~~l~~Gak~V~iSap 124 (337)
T 1rm4_O 73 VIKVVSDRNPVNLPWGDMGIDLVIEGT-GVFVDRDGAGKHLQAGAKKVLITAP 124 (337)
T ss_dssp EEEEECCSCGGGSCHHHHTCCEEEECS-SSCCBHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEEecCChhhCcccccCCCEEEECC-CchhhHHHHHHHHHcCCEEEEECCc
Confidence 1112222 25 35899999986 4556788888888899999887764
No 119
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.87 E-value=0.025 Score=57.53 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=70.4
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHH--------CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIA--------YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e--------~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p 484 (588)
+++-.||+|+|+|.+|+.-++.+.. .+++||+|+|. |++ .+..+. ++|+
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-----~~~-----~a~~~a-------------~~~g 78 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-----NAG-----LAEARA-------------GEFG 78 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC-------T-----THHHHH-------------HHHT
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-----CHH-----HHHHHH-------------HHhC
Confidence 3566799999999999865554433 36899999998 433 221111 1222
Q ss_pred CceEeCC-CCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---HHHCCceEec
Q 007820 485 RSKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIAP 552 (588)
Q Consensus 485 ~a~~i~~-~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGI~viP 552 (588)
-....++ ++++ +.++|+++=|+ .+..+.+.+...++.|..|+||=-=.....||+++ .+++|+.+..
T Consensus 79 ~~~~y~d~~ell~~~~iDaV~Iat-P~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v 150 (393)
T 4fb5_A 79 FEKATADWRALIADPEVDVVSVTT-PNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAAL 150 (393)
T ss_dssp CSEEESCHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEE
T ss_pred CCeecCCHHHHhcCCCCcEEEECC-ChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcccc
Confidence 2222332 4455 35788887766 46678888888888899999985322233455543 3667766553
No 120
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.86 E-value=0.017 Score=59.81 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=72.1
Q ss_pred CcEEEEeccchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 416 GLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 416 GkrVaIQGfGNVG~~-aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
-.||+|+|+|++|.. .+..|.+. +++|++|+|. + .+++ . . .+++....++ +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-----~-----~~~~---~---~----------~~~~~~~~~~~~ 60 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR-----D-----EEKV---K---R----------DLPDVTVIASPE 60 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS-----C-----HHHH---H---H----------HCTTSEEESCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC-----C-----HHHH---H---h----------hCCCCcEECCHH
Confidence 368999999999985 67777665 7899999988 2 2332 1 1 1223333333 3
Q ss_pred Cccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEeccc
Q 007820 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPAM 554 (588)
Q Consensus 493 eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD~ 554 (588)
+++. .++|+++-|+ .+..+.+.+...++.+..+++|=-=.....++. +..+++|+.+...+
T Consensus 61 ~ll~~~~~D~V~i~t-p~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 125 (364)
T 3e82_A 61 AAVQHPDVDLVVIAS-PNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFH 125 (364)
T ss_dssp HHHTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHhcCCCCCEEEEeC-ChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 4553 5789999875 556778888888888999999841111123333 44467787765443
No 121
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.86 E-value=0.011 Score=59.95 Aligned_cols=126 Identities=9% Similarity=0.086 Sum_probs=72.8
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccC
Q 007820 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~g 474 (588)
-|+|.+.+++ ..+.+++|++|+|.|.|.+|+.++..|.+.|++-|.|.+++ ++ +..
T Consensus 100 D~~G~~~~L~----~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-----~~-----~a~---------- 155 (277)
T 3don_A 100 DGIGYVNGLK----QIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRT-----MS-----RFN---------- 155 (277)
T ss_dssp HHHHHHHHHH----HHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC-----GG-----GGT----------
T ss_pred hHHHHHHHHH----HhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-----HH-----HHH----------
Confidence 3667666554 45778999999999999999999999999999446777762 11 110
Q ss_pred ChhhhhhccCCceEeCCCCc--cccccceeecCCCcCccchh----hHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCc
Q 007820 475 SLRDYSKTYARSKYYDEAKP--WNERCDVAFPCASQNEIDQS----DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (588)
Q Consensus 475 sL~~y~~~~p~a~~i~~~ei--l~~dcDILIPcA~~n~It~e----nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (588)
.+.. ....+.-+++ +-.++||+|-|..-...... +...+ ....+|++-.-.|....-.+..+++|+
T Consensus 156 ~la~------~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l--~~~~~V~D~vY~P~~T~ll~~A~~~G~ 227 (277)
T 3don_A 156 NWSL------NINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRL--ASHTLVSDIVYNPYKTPILIEAEQRGN 227 (277)
T ss_dssp TCCS------CCEEECHHHHHHTGGGCSEEEECCC-------CCSSCCTTC--CSSCEEEESCCSSSSCHHHHHHHHTTC
T ss_pred HHHH------hcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHc--CCCCEEEEecCCCCCCHHHHHHHHCcC
Confidence 0000 0000000011 12478999877653211110 11222 245788998877742235566678887
Q ss_pred eEec
Q 007820 549 LIAP 552 (588)
Q Consensus 549 ~viP 552 (588)
.+++
T Consensus 228 ~~~~ 231 (277)
T 3don_A 228 PIYN 231 (277)
T ss_dssp CEEC
T ss_pred EEeC
Confidence 6543
No 122
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.86 E-value=0.012 Score=58.38 Aligned_cols=109 Identities=13% Similarity=0.125 Sum_probs=63.0
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +++ ++..+.+ . ++...+.-+-.-
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V-~~~dr-----~~~-----~~~~~~~---~------------g~~~~~~~~~~~ 55 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSV-TIWNR-----SPE-----KAEELAA---L------------GAERAATPCEVV 55 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-----SGG-----GGHHHHH---T------------TCEECSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeE-EEEcC-----CHH-----HHHHHHH---C------------CCeecCCHHHHH
Confidence 68999999999999999999999985 46665 322 2211221 1 122211111112
Q ss_pred cccceeecCCCcCccchhhH---Hhh---hhcCCeEEEecCCC-CC-CHHHHHHHHHCCceEec
Q 007820 497 ERCDVAFPCASQNEIDQSDA---INL---VNSGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA---~~l---~~~~akiVvEgAN~-P~-T~eA~~iL~~rGI~viP 552 (588)
.+||++|-|.....-..+.. ..+ +..++ +|+.-.+. |. +.+..+.+.++|+.|+.
T Consensus 56 ~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~-~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 56 ESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGR-GYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp HHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCC-EEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 37899998887432222222 222 12344 55555554 43 34455778889998864
No 123
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.82 E-value=0.027 Score=54.98 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=62.1
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.++.+++|.|.|+|++|..+|+.|.+.|..+|.+.|. +.+++..+.+ .. +....+.
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~----------~~~~~~~~~~---~~-----------g~~~~~~ 61 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSR----------TEESARELAQ---KV-----------EAEYTTD 61 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS----------SHHHHHHHHH---HT-----------TCEEESC
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC----------CHHHHHHHHH---Hc-----------CCceeCC
Confidence 3556789999999999999999999999987788876 2333322221 10 1222211
Q ss_pred -CCccccccceeecCCCcCccchhhHHhhhh-c-CCeEEEecCCCCC
Q 007820 492 -AKPWNERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPC 535 (588)
Q Consensus 492 -~eil~~dcDILIPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~ 535 (588)
++.+ .+||++|-|.....+ .+-+..+.. . .-++|+..+|+..
T Consensus 62 ~~~~~-~~~Dvvi~av~~~~~-~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 62 LAEVN-PYAKLYIVSLKDSAF-AELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp GGGSC-SCCSEEEECCCHHHH-HHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred HHHHh-cCCCEEEEecCHHHH-HHHHHHHHhhcCCCcEEEECCCCCc
Confidence 2222 379999999987755 444455432 1 3357777777643
No 124
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.82 E-value=0.018 Score=58.66 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=74.2
Q ss_pred cEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCc
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ei 494 (588)
+||+|+|+ |.+|...++.|.+.+.++++|+|. +++- .. +.+.+++....++ +++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-----~~~~---~~----------------~~~~~~~~~~~~~~~~l 59 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDI-----NDSV---GI----------------IDSISPQSEFFTEFEFF 59 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECS-----SCCC---GG----------------GGGTCTTCEEESSHHHH
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcC-----CHHH---HH----------------HHhhCCCCcEECCHHHH
Confidence 58999999 789999999998889999999998 3331 01 1112344444433 334
Q ss_pred c----------ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHH---HHHHCCceEe
Q 007820 495 W----------NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVD---VLKKANVLIA 551 (588)
Q Consensus 495 l----------~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~---iL~~rGI~vi 551 (588)
+ +.++|+++=|+ .+..+.+-+...++.|..++||=-=.....|+++ ..+++|+.+.
T Consensus 60 l~~~~~l~~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 128 (318)
T 3oa2_A 60 LDHASNLKRDSATALDYVSICS-PNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLY 128 (318)
T ss_dssp HHHHHHHTTSTTTSCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEE
T ss_pred HHhhhhhhhccCCCCcEEEECC-CcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEE
Confidence 4 46889988765 5678888888888999999999522222244443 3456777554
No 125
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.82 E-value=0.011 Score=60.96 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=71.9
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
+-.||+|+|+|++|...++.|.+. ++++++|+|. +.+++. .. .. + +....++ +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------~~~~~~---~a-~~------~-----g~~~~~~~~ 58 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI----------LAEKRE---AA-AQ------K-----GLKIYESYE 58 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS----------SHHHHH---HH-HT------T-----TCCBCSCHH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC----------CHHHHH---HH-Hh------c-----CCceeCCHH
Confidence 457999999999999989888876 7899999987 233321 11 11 1 2222222 3
Q ss_pred Ccc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEe
Q 007820 493 KPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIA 551 (588)
Q Consensus 493 eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~vi 551 (588)
+++ +.++|+++-|. .+..+.+.+...++.+..++||=-=.....++. +..+++|+.+.
T Consensus 59 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~ 120 (359)
T 3e18_A 59 AVLADEKVDAVLIAT-PNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFM 120 (359)
T ss_dssp HHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred HHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 344 35789999766 556778888888888999999951111223444 33456777654
No 126
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.81 E-value=0.036 Score=60.68 Aligned_cols=92 Identities=12% Similarity=0.139 Sum_probs=58.2
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+..+.|++|+|.|+|.||+.+|+.|...|++|+ +.|. +..++. ..+.. ++..++
T Consensus 269 ~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Vi-v~d~----------~~~~~~---~A~~~------------Ga~~~~ 322 (494)
T 3ce6_A 269 DALIGGKKVLICGYGDVGKGCAEAMKGQGARVS-VTEI----------DPINAL---QAMME------------GFDVVT 322 (494)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHH---HHHHT------------TCEECC
T ss_pred CCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC----------CHHHHH---HHHHc------------CCEEec
Confidence 457899999999999999999999999999865 5554 233321 11110 222222
Q ss_pred CCCccccccceeecCCCc-CccchhhHHhhhhcCCeEEEec
Q 007820 491 EAKPWNERCDVAFPCASQ-NEIDQSDAINLVNSGCRILVEG 530 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~-n~It~enA~~l~~~~akiVvEg 530 (588)
.++++ ..+||+|-|+.. +.|+.+....+ +.++.+|-=|
T Consensus 323 l~e~l-~~aDvVi~atgt~~~i~~~~l~~m-k~ggilvnvG 361 (494)
T 3ce6_A 323 VEEAI-GDADIVVTATGNKDIIMLEHIKAM-KDHAILGNIG 361 (494)
T ss_dssp HHHHG-GGCSEEEECSSSSCSBCHHHHHHS-CTTCEEEECS
T ss_pred HHHHH-hCCCEEEECCCCHHHHHHHHHHhc-CCCcEEEEeC
Confidence 12222 479999998653 45665555554 5577665444
No 127
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.80 E-value=0.015 Score=59.99 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=44.3
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
...|.+|++ ++|++.+.++.|++|+|.|.|+ ||..+|.+|..+||+ |+|+++
T Consensus 145 ~PcTp~gi~----~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAt-Vtv~hs 197 (301)
T 1a4i_A 145 IPCTPKGCL----ELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNAT-VTTCHS 197 (301)
T ss_dssp CCHHHHHHH----HHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred cCchHHHHH----HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCe-EEEEEC
Confidence 457888854 5566778899999999999997 899999999999999 678876
No 128
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.80 E-value=0.034 Score=56.42 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=64.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
+||.++|+|++|...|+.|.+.|+.| .+.|. +++ +. ..+.+ -+++..+.-.-+-
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V-~v~dr-----~~~-----~~----------~~l~~-----~G~~~~~s~~e~~ 59 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYEL-VVWNR-----TAS-----KA----------EPLTK-----LGATVVENAIDAI 59 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEC---------------------------CTTTT-----TTCEECSSGGGGC
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeE-EEEeC-----CHH-----HH----------HHHHH-----cCCeEeCCHHHHH
Confidence 58999999999999999999999995 45554 221 21 11111 1334333222223
Q ss_pred cccceeecCCCcCc-----cchhhHHhhhhcCCeEEEecCCC-C-CCHHHHHHHHHCCceEec
Q 007820 497 ERCDVAFPCASQNE-----IDQSDAINLVNSGCRILVEGSNM-P-CTPEAVDVLKKANVLIAP 552 (588)
Q Consensus 497 ~dcDILIPcA~~n~-----It~enA~~l~~~~akiVvEgAN~-P-~T~eA~~iL~~rGI~viP 552 (588)
.+|||+|-|-.... +..+-+..+ ..-.+|++..+. | ++.+..+.+.++|+.|+=
T Consensus 60 ~~~dvvi~~l~~~~~~~~v~~~~~~~~~--~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 60 TPGGIVFSVLADDAAVEELFSMELVEKL--GKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp CTTCEEEECCSSHHHHHHHSCHHHHHHH--CTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hcCCceeeeccchhhHHHHHHHHHHhhc--CCCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence 57899987765432 223323333 233467776665 5 456667889999999873
No 129
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.78 E-value=0.064 Score=58.72 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=35.0
Q ss_pred HHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 408 ADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 408 ~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+..+..+.|++|+|.|+|.+|..+|+.|...|++| .++|.
T Consensus 257 r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~V-iv~D~ 296 (488)
T 3ond_A 257 RATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARV-IVTEI 296 (488)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred HHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEE-EEEcC
Confidence 44577899999999999999999999999999985 45665
No 130
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=95.77 E-value=0.019 Score=55.70 Aligned_cols=101 Identities=20% Similarity=0.211 Sum_probs=69.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
+||.|.|+|++|+..++.|.+.|..++++.|++. . .+ + . +. +.++++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-----~-~~--~---------------~----~~-----~~~~l~~ 48 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-----E-HE--K---------------M----VR-----GIDEFLQ 48 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-----C-CT--T---------------E----ES-----SHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-----c-hh--h---------------h----cC-----CHHHHhc
Confidence 4799999999999999999888999999998732 1 00 0 0 00 1112222
Q ss_pred cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHH----HHHHHHCCceE
Q 007820 497 ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA----VDVLKKANVLI 550 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA----~~iL~~rGI~v 550 (588)
.++|+++-|+... ...+.+...++.+..+|+|..-.+..+++ .+..+++|+.+
T Consensus 49 ~~~DvVv~~~~~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 49 REMDVAVEAASQQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp SCCSEEEECSCHH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCE
T ss_pred CCCCEEEECCCHH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeE
Confidence 4789999998644 66777777778899999997544444544 34456678763
No 131
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.75 E-value=0.014 Score=60.21 Aligned_cols=112 Identities=9% Similarity=0.103 Sum_probs=72.6
Q ss_pred CCcEEEEeccchHHHH-HHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 415 KGLRCVVSGSGKIAMH-VLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~-aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
+-.||+|+|+|++|.. .+..|.+. +++|++|+|. + .+++ .+ .+++....++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-----~-----~~~~---~~-------------~~~~~~~~~~~ 57 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS-----R-----TEEV---KR-------------DFPDAEVVHEL 57 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS-----C-----HHHH---HH-------------HCTTSEEESST
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC-----C-----HHHH---Hh-------------hCCCCceECCH
Confidence 3469999999999985 67777665 7899999998 2 2221 11 1233333332
Q ss_pred CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 492 ~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
++++. .++|+++-|+ .+..+.+.+...++.|..+++|=-=.....++. +..+++|+.+...
T Consensus 58 ~~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 122 (358)
T 3gdo_A 58 EEITNDPAIELVIVTT-PSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVY 122 (358)
T ss_dssp HHHHTCTTCCEEEECS-CTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhcCCCCCEEEEcC-CcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 44553 5899999877 456788888888889999999842111223444 3445677766543
No 132
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.74 E-value=0.02 Score=59.76 Aligned_cols=106 Identities=22% Similarity=0.242 Sum_probs=56.3
Q ss_pred hCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
.+.++.|+||.|.|+|++|+.+|+.|...|.+|+ +.|.+.. ... +....
T Consensus 165 ~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~-~~dr~~~----~~~--------------------------~~~~~ 213 (340)
T 4dgs_A 165 LGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVR-YWNRSTL----SGV--------------------------DWIAH 213 (340)
T ss_dssp CCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEE-EECSSCC----TTS--------------------------CCEEC
T ss_pred ccccccCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcCCcc----ccc--------------------------Cceec
Confidence 3568999999999999999999999999999965 4444110 000 01111
Q ss_pred CC-CCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce
Q 007820 490 DE-AKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL 549 (588)
Q Consensus 490 ~~-~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~ 549 (588)
.. ++ +-..|||++-|.. .+.|+.+....+ +.+ .+++.-|.++ +..+| .+.|++..|.
T Consensus 214 ~sl~e-ll~~aDvVil~vP~t~~t~~li~~~~l~~m-k~g-ailIN~aRG~vvde~aL~~aL~~g~i~ 278 (340)
T 4dgs_A 214 QSPVD-LARDSDVLAVCVAASAATQNIVDASLLQAL-GPE-GIVVNVARGNVVDEDALIEALKSGTIA 278 (340)
T ss_dssp SSHHH-HHHTCSEEEECC----------CHHHHHHT-TTT-CEEEECSCC--------------CCSS
T ss_pred CCHHH-HHhcCCEEEEeCCCCHHHHHHhhHHHHhcC-CCC-CEEEECCCCcccCHHHHHHHHHcCCce
Confidence 11 11 1236888877654 456666665555 334 3667777776 33333 4666666553
No 133
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.74 E-value=0.028 Score=60.46 Aligned_cols=116 Identities=14% Similarity=0.144 Sum_probs=70.9
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe--C--
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY--D-- 490 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i--~-- 490 (588)
++++|+|.|.|.+|+++|+.|.+.|++ |.+.|. +.+++. ...... ++...+ +
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~-V~v~~R----------~~~~a~---~la~~~----------~~~~~~~~Dv~ 57 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIK-VTVACR----------TLESAK---KLSAGV----------QHSTPISLDVN 57 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCE-EEEEES----------SHHHHH---HTTTTC----------TTEEEEECCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCE-EEEEEC----------CHHHHH---HHHHhc----------CCceEEEeecC
Confidence 578999999999999999999999998 567665 223321 111110 111111 1
Q ss_pred C-C---CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccc
Q 007820 491 E-A---KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAA 556 (588)
Q Consensus 491 ~-~---eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~la 556 (588)
+ + +++ .++|++|-|+... .+.+.+...++.+..++.+....|.+.+..+..+++|+.++++.-.
T Consensus 58 d~~~l~~~l-~~~DvVIn~a~~~-~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~ 125 (450)
T 1ff9_A 58 DDAALDAEV-AKHDLVISLIPYT-FHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125 (450)
T ss_dssp CHHHHHHHH-TTSSEEEECCC---CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBB
T ss_pred CHHHHHHHH-cCCcEEEECCccc-cchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCC
Confidence 0 0 111 2799999998643 2333333434557888888654454445556778899988876544
No 134
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.73 E-value=0.019 Score=57.94 Aligned_cols=119 Identities=10% Similarity=0.145 Sum_probs=74.6
Q ss_pred CCcEEEEecc-chHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 415 KGLRCVVSGS-GKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 415 ~GkrVaIQGf-GNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
+.+||+|.|+ |.+|+.+++.+.+ .|..++++.|.+..-. .|-|..++ .+ +.. .+....++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~--~g~d~~~~---------~g-~~~-----~~v~~~~dl 66 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL--LGSDAGEL---------AG-AGK-----TGVTVQSSL 66 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT--CSCCTTCS---------SS-SSC-----CSCCEESCS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh--hhhhHHHH---------cC-CCc-----CCceecCCH
Confidence 4479999998 9999999998764 6789999999732100 03332111 00 000 01122222
Q ss_pred CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHH----CCceEeccc
Q 007820 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKK----ANVLIAPAM 554 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~----rGI~viPD~ 554 (588)
++++. ++|++|-++... .+.+++...++.+..+|++-. ..|++..+.|.+ .++++.|.+
T Consensus 67 ~~~l~-~~DvVIDft~p~-~~~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~~~a~~~~vv~a~N~ 129 (273)
T 1dih_A 67 DAVKD-DFDVFIDFTRPE-GTLNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAAADIAIVFAANF 129 (273)
T ss_dssp TTTTT-SCSEEEECSCHH-HHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHTTTSCEEECSCC
T ss_pred HHHhc-CCCEEEEcCChH-HHHHHHHHHHhCCCCEEEECC--CCCHHHHHHHHHhcCCCCEEEEecC
Confidence 34444 799999888644 446777787889999999876 366665555543 367777643
No 135
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.73 E-value=0.022 Score=57.86 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=74.4
Q ss_pred cEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCc
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ei 494 (588)
+||+|+|+ |.+|...++.|.+.+.++++|+|. +++- .. +.+.+++....++ +++
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~-----~~~~---~~----------------~~~~~~~~~~~~~~~~l 59 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP-----ATNV---GL----------------VDSFFPEAEFFTEPEAF 59 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS-----SCCC---GG----------------GGGTCTTCEEESCHHHH
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC-----CHHH---HH----------------HHhhCCCCceeCCHHHH
Confidence 58999999 789999999999899999999997 4331 00 1112344444433 334
Q ss_pred c---------ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---HHHCCceEe
Q 007820 495 W---------NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIA 551 (588)
Q Consensus 495 l---------~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGI~vi 551 (588)
+ +.++|+++=|+ .+..+.+-+...++.+..++||=-=.....|++++ .+++|+.+.
T Consensus 60 l~~~~~l~~~~~~vD~V~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 127 (312)
T 3o9z_A 60 EAYLEDLRDRGEGVDYLSIAS-PNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVY 127 (312)
T ss_dssp HHHHHHHHHTTCCCSEEEECS-CGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEE
T ss_pred HHHhhhhcccCCCCcEEEECC-CchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4 35889998766 46678888888889999999994222233455543 356777553
No 136
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.72 E-value=0.016 Score=60.66 Aligned_cols=122 Identities=15% Similarity=0.128 Sum_probs=72.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCC----CeEEEEEcCCCeeeCCC--CCCH-HHHHHHHHHhhccC---ChhhhhhccCCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDAKGYLVDED--GFDY-MKISFLRDIKSQQR---SLRDYSKTYARS 486 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~G----AKVVaVSDs~G~Iydpd--GLDi-e~L~~L~~~k~~~g---sL~~y~~~~p~a 486 (588)
.+|+|.|+|+||+.+++.|.+.. .+|++|+|++...++++ |++. ..+..++. ...+ .+....
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~--~~~~~~~did~v~------ 76 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALA--ASTTKTLPLDDLI------ 76 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHH--TCCCBCCCHHHHH------
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHh--cccCCCCCHHHHH------
Confidence 58999999999999999998863 79999999988778777 8754 22211121 1000 111000
Q ss_pred eEeCCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEE--ecCCCCCCHHHHHHH--HHCCceEe
Q 007820 487 KYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILV--EGSNMPCTPEAVDVL--KKANVLIA 551 (588)
Q Consensus 487 ~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVv--EgAN~P~T~eA~~iL--~~rGI~vi 551 (588)
+.+.. ....||++.|+.... ..+.+...++.|..+|+ +.+......++.+++ +++|+.+.
T Consensus 77 e~~~~----~~~~DvVV~~t~~~~-~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~ 140 (358)
T 1ebf_A 77 AHLKT----SPKPVILVDNTSSAY-IAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVY 140 (358)
T ss_dssp HHHTT----CSSCEEEEECSCCHH-HHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEE
T ss_pred HHhhh----ccCCcEEEEcCCChH-HHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEE
Confidence 00000 012399999987653 33444455678999998 555433325555443 34576554
No 137
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.71 E-value=0.02 Score=57.12 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=67.1
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~eil 495 (588)
+||+|.|+|++|+.+++.+.+.+..++++.|.++.- +. +....+ -++++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~--~~----------------------------gv~v~~dl~~l~ 53 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA--TT----------------------------PYQQYQHIADVK 53 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC----C----------------------------CSCBCSCTTTCT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc--cC----------------------------CCceeCCHHHHh
Confidence 589999999999999999998766999999974320 00 111111 13343
Q ss_pred ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHH----HCCceEecccc
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAMA 555 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~----~rGI~viPD~l 555 (588)
++|++|-++..+.+. +++. ++.+..+|++-. ..+++..+.|+ +.+|++.|.+.
T Consensus 54 --~~DVvIDft~p~a~~-~~~~--l~~g~~vVigTT--G~s~e~~~~l~~aa~~~~v~~a~N~S 110 (243)
T 3qy9_A 54 --GADVAIDFSNPNLLF-PLLD--EDFHLPLVVATT--GEKEKLLNKLDELSQNMPVFFSANMS 110 (243)
T ss_dssp --TCSEEEECSCHHHHH-HHHT--SCCCCCEEECCC--SSHHHHHHHHHHHTTTSEEEECSSCC
T ss_pred --CCCEEEEeCChHHHH-HHHH--HhcCCceEeCCC--CCCHHHHHHHHHHHhcCCEEEECCcc
Confidence 899999888766553 4444 477889998533 45665444443 34667776653
No 138
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=95.70 E-value=0.043 Score=58.88 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=68.2
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.|...|.+|++ .|.+... . . .++....
T Consensus 151 ~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~-yd~~~~~------~----------------~-------~~~~~~~ 200 (416)
T 3k5p_A 151 SREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRY-YDTSDKL------Q----------------Y-------GNVKPAA 200 (416)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECTTCCC------C----------------B-------TTBEECS
T ss_pred CccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEE-ECCcchh------c----------------c-------cCcEecC
Confidence 3579999999999999999999999999999754 3432100 0 0 0111111
Q ss_pred CCCccccccceeecCCC-----cCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCce-Eeccc
Q 007820 491 EAKPWNERCDVAFPCAS-----QNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANVL-IAPAM 554 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~-----~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI~-viPD~ 554 (588)
.-+-+-..|||++-|.. .+.|+.+....+ +. -.+++.-|-++ +..+| .+.|++..|. .+=|.
T Consensus 201 sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~m-k~-gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDV 270 (416)
T 3k5p_A 201 SLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKM-KK-GAFLINNARGSDVDLEALAKVLQEGHLAGAAIDV 270 (416)
T ss_dssp SHHHHHHHCSEEEECCCC-----CCBCHHHHHHS-CT-TEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECC
T ss_pred CHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhC-CC-CcEEEECCCChhhhHHHHHHHHHcCCccEEEeCC
Confidence 10111237888876653 467777766665 32 34667777776 55554 4677666654 33343
No 139
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.69 E-value=0.023 Score=57.38 Aligned_cols=114 Identities=10% Similarity=0.043 Sum_probs=65.3
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
..+-++|.|.|+|++|..+|+.|.+.|..| .+.|. +++ ++..+.+ . ++...+..
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V-~~~dr-----~~~-----~~~~l~~---~------------g~~~~~~~ 71 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKV-TVWNR-----TLS-----KCDELVE---H------------GASVCESP 71 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-----SGG-----GGHHHHH---T------------TCEECSSH
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeE-EEEeC-----CHH-----HHHHHHH---C------------CCeEcCCH
Confidence 334579999999999999999999999985 45665 222 2221221 0 22222111
Q ss_pred CccccccceeecCCCcCccchhhH---Hhhhh--cCCeEEEecCCC-CC-CHHHHHHHHHCCceEec
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDA---INLVN--SGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA---~~l~~--~~akiVvEgAN~-P~-T~eA~~iL~~rGI~viP 552 (588)
.-.-.+|||+|-|........+.. ..+.. ..-++|+.-++. |. +.+..+.+.++|+.|+.
T Consensus 72 ~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 72 AEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp HHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 111237899998876542222222 22211 123456665554 33 34456778899998864
No 140
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.69 E-value=0.078 Score=48.21 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=65.5
Q ss_pred CcEEEEecc----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 416 GkrVaIQGf----GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
-++|+|+|. |++|..+++.|.+.|++|..| ||.+ +++ ..+.- |+...
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--------np~~---~~i----------~G~~~----y~sl~---- 72 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--------NPKY---EEV----------LGRKC----YPSVL---- 72 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC---SEE----------TTEEC----BSSGG----
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--------CCCC---CeE----------CCeec----cCCHH----
Confidence 469999999 799999999999999986555 3332 010 00111 11111
Q ss_pred CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEe
Q 007820 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~vi 551 (588)
++ ..++|+++-|... ....+-++.+++.+++.|+--+. -...+..+..+++|+.++
T Consensus 73 -~l-~~~vDlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~g-~~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 73 -DI-PDKIEVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQYN-TYNREASKKADEAGLIIV 128 (144)
T ss_dssp -GC-SSCCSEEEECSCH-HHHHHHHHHHHHHTCSEEEECTT-CCCHHHHHHHHHTTCEEE
T ss_pred -Hc-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEECCC-chHHHHHHHHHHcCCEEE
Confidence 11 1267877776544 33445555556668887775432 247888899999999887
No 141
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=95.68 E-value=0.019 Score=60.49 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=66.5
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh------ccCC--ce
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYAR--SK 487 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~------~~p~--a~ 487 (588)
..||+|.|||-||+.+.+.|.+....||+|.|. .|.+.+..|+++-...|++..-.+ .+.+ .+
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl---------~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~ 91 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAINDL---------TDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIK 91 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEE
T ss_pred CeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC---------CCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEE
Confidence 469999999999999999999888999999875 366666556544332232211000 0111 11
Q ss_pred EeC---CCC-cc-ccccceeecCCCcCccc----hhhHHhhhh-cCCe-EEEec
Q 007820 488 YYD---EAK-PW-NERCDVAFPCASQNEID----QSDAINLVN-SGCR-ILVEG 530 (588)
Q Consensus 488 ~i~---~~e-il-~~dcDILIPcA~~n~It----~enA~~l~~-~~ak-iVvEg 530 (588)
... +++ .| ...+||++.|+. .-.+ .+-|..-++ .||| +|+.+
T Consensus 92 v~~~~dp~~i~w~~~gvDiV~esTG-~f~s~~~~~e~a~~hl~~aGAkkVVIsa 144 (356)
T 3hja_A 92 IIAERDPKNLPWAKLGIDVVIESTG-VFSSATSDKGGYLDHVNHAGAKKVILTV 144 (356)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSS-SCCSSCCTTCCGGGGTTTSCCSEEEESS
T ss_pred EEEcCChhhCCccccCCCEEEEecc-cccccchhHHHHHHHHHhCCCeEEEECC
Confidence 111 122 36 468999999974 4456 777777777 7887 44443
No 142
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=95.68 E-value=0.031 Score=56.60 Aligned_cols=113 Identities=19% Similarity=0.295 Sum_probs=70.0
Q ss_pred CCcEEEEeccchHHHHHHHHHH-H-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~-e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
+-.||+|+|+|++|...++.|. + .++++|+|+|. +.+++..+. +. ++.....++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~----------~~~~~~~~a---~~----------~g~~~~~~~~ 63 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL----------DSNQLEWAK---NE----------LGVETTYTNY 63 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS----------CHHHHHHHH---HT----------TCCSEEESCH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC----------CHHHHHHHH---HH----------hCCCcccCCH
Confidence 3469999999999999888887 5 47899999987 333332111 11 111022222
Q ss_pred CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCH-HHHHH---HHHC-CceEec
Q 007820 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAVDV---LKKA-NVLIAP 552 (588)
Q Consensus 492 ~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~~i---L~~r-GI~viP 552 (588)
++++. .++|+++-|+. +..+.+.+...++.+..+++|-- +.++. ++.++ .+++ |+.+..
T Consensus 64 ~~~l~~~~~D~V~i~tp-~~~h~~~~~~al~~G~~v~~eKp-~~~~~~~~~~l~~~a~~~~~~~~~~ 128 (346)
T 3cea_A 64 KDMIDTENIDAIFIVAP-TPFHPEMTIYAMNAGLNVFCEKP-LGLDFNEVDEMAKVIKSHPNQIFQS 128 (346)
T ss_dssp HHHHTTSCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSC-CCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred HHHhcCCCCCEEEEeCC-hHhHHHHHHHHHHCCCEEEEcCC-CCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 33443 47999998764 55667777777788888998741 11233 34333 3566 776653
No 143
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.65 E-value=0.014 Score=59.20 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=69.9
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ 492 (588)
+-.||+|+|+|++|...++.|.+. ++.+++|+|. +++-.. .+.+.++-.... +.+
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~-----~~~~~~------------------~~a~~~~~~~~~~~~~ 60 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR-----TLESAQ------------------AFANKYHLPKAYDKLE 60 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS-----CSSTTC------------------C---CCCCSCEESCHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC-----CHHHHH------------------HHHHHcCCCcccCCHH
Confidence 346999999999999888888765 6789999997 443211 111111111112 223
Q ss_pred Cccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEec
Q 007820 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAP 552 (588)
Q Consensus 493 eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viP 552 (588)
+++. .++|+++-|. .+..+.+.+...++.+..+++|=-=.....++. +..+++|+.+..
T Consensus 61 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 61 DMLADESIDVIYVAT-INQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLME 123 (329)
T ss_dssp HHHTCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHhcCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4443 5789988765 456677778888888999999852111223443 334677875543
No 144
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.64 E-value=0.015 Score=60.78 Aligned_cols=103 Identities=14% Similarity=0.167 Sum_probs=61.0
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHh--hccCCh--hhhhhccCCce-EeC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSL--RDYSKTYARSK-YYD 490 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k--~~~gsL--~~y~~~~p~a~-~i~ 490 (588)
.||+|.|||.||+.+++.|.+. +..||+|.|+ +++ .+..+++.. ...|++ ..-...+.+.. .+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~-----~~~-----~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~ 72 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT-----KPD-----FEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVE 72 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES-----SCS-----HHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-----CHH-----HHHHHHHhcCCccccccCCCceeecccCCeEEEC
Confidence 5899999999999999999876 6899999996 222 222233332 112222 10000010101 111
Q ss_pred C--CCccccccceeecCCCcCccchhhHH-hhhhcCCeEEEecC
Q 007820 491 E--AKPWNERCDVAFPCASQNEIDQSDAI-NLVNSGCRILVEGS 531 (588)
Q Consensus 491 ~--~eil~~dcDILIPcA~~n~It~enA~-~l~~~~akiVvEgA 531 (588)
+ .+++ .++||++.|+.. -++.+.++ ..++.|+++|..+.
T Consensus 73 ~~~~~~~-~~vDiV~eatg~-~~s~~~a~~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 73 GTILDII-EDADIVVDGAPK-KIGKQNLENIYKPHKVKAILQGG 114 (343)
T ss_dssp CBGGGTG-GGCSEEEECCCT-THHHHHHHHTTTTTTCEEEECTT
T ss_pred CchHHhc-cCCCEEEECCCc-cccHHHHHHHHHHCCCEEEECCC
Confidence 1 1222 389999999754 45566664 66778999887553
No 145
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=95.60 E-value=0.029 Score=58.42 Aligned_cols=99 Identities=17% Similarity=0.239 Sum_probs=64.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh----c--cCC--ceE
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR--SKY 488 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~----~--~p~--a~~ 488 (588)
.||+|.|||-||+-+++.|.+....|++|.|. .|++.+..|+......|.+..... . +.+ .+.
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~---------~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v 71 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL---------TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRA 71 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC---------CCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEE
Confidence 37999999999999999988778899999984 366666556654444443211100 0 011 111
Q ss_pred e---CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe
Q 007820 489 Y---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR 525 (588)
Q Consensus 489 i---~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak 525 (588)
. ++++ .| +..|||++.|+ +.-.+.+.|...++.|||
T Consensus 72 ~~~~dp~~l~w~~~gvDiV~est-G~~~s~e~a~~~l~aGak 112 (331)
T 2g82_O 72 TAVKDPKEIPWAEAGVGVVIEST-GVFTDADKAKAHLEGGAK 112 (331)
T ss_dssp ECCSSGGGSCTTTTTEEEEEECS-SSCCBHHHHTHHHHTTCS
T ss_pred EecCChhhCcccccCCCEEEECC-CchhhHHHHHHHHHCCCC
Confidence 2 1221 36 35899999986 566788888888888883
No 146
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.59 E-value=0.053 Score=57.75 Aligned_cols=105 Identities=17% Similarity=0.173 Sum_probs=64.4
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|||+.|.|+|++|+.+|+.|...|.+|++ .|.+... +.| ++...+
T Consensus 140 ~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~-~d~~~~~--~~~---------------------------~~~~~~ 189 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHIGTQLGILAESLGMYVYF-YDIENKL--PLG---------------------------NATQVQ 189 (404)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEE-ECSSCCC--CCT---------------------------TCEECS
T ss_pred ccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE-EcCCchh--ccC---------------------------CceecC
Confidence 4589999999999999999999999999999753 4442110 000 011111
Q ss_pred C-CCccccccceeecCC-----CcCccchhhHHhhhhcCCeEEEecCCCC-CCHHH-HHHHHHCCc
Q 007820 491 E-AKPWNERCDVAFPCA-----SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEA-VDVLKKANV 548 (588)
Q Consensus 491 ~-~eil~~dcDILIPcA-----~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA-~~iL~~rGI 548 (588)
. +++ -..||+++-|. +.+.|+.+....+ +.++ +++.-|-++ +..+| .+.|++..|
T Consensus 190 ~l~el-l~~aDvV~l~~P~t~~t~~li~~~~l~~m-k~ga-~lIN~aRg~~vd~~aL~~aL~~g~i 252 (404)
T 1sc6_A 190 HLSDL-LNMSDVVSLHVPENPSTKNMMGAKEISLM-KPGS-LLINASRGTVVDIPALADALASKHL 252 (404)
T ss_dssp CHHHH-HHHCSEEEECCCSSTTTTTCBCHHHHHHS-CTTE-EEEECSCSSSBCHHHHHHHHHTTSE
T ss_pred CHHHH-HhcCCEEEEccCCChHHHHHhhHHHHhhc-CCCe-EEEECCCChHHhHHHHHHHHHcCCc
Confidence 1 111 23678887664 4456776665555 3344 555666665 55554 466666555
No 147
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=95.55 E-value=0.035 Score=58.11 Aligned_cols=102 Identities=19% Similarity=0.314 Sum_probs=67.6
Q ss_pred cEEEEeccchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh------ccCC--
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYAR-- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~------~~p~-- 485 (588)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-...|.+..-.+ .+.+
T Consensus 3 ~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~ 73 (335)
T 3doc_A 3 VRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL---------GPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGP 73 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSE
T ss_pred EEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC---------CCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEE
Confidence 4899999999999999998876 4688999875 477777666665444443321110 0111
Q ss_pred ceEe---CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEE
Q 007820 486 SKYY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (588)
Q Consensus 486 a~~i---~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVv 528 (588)
.+.. ++++ .| +..+||++.|+ +.-.+.+-|..-++.|||-|+
T Consensus 74 I~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVi 120 (335)
T 3doc_A 74 IKVHAVRNPAELPWKEENVDIALECT-GIFTSRDKAALHLEAGAKRVI 120 (335)
T ss_dssp EEEECCSSTTSSCTTTTTCSEEEECS-SSCCSHHHHTHHHHTTCSEEE
T ss_pred EEEEeecccccccccccCCCEEEEcc-CccCCHHHHHHHHHcCCCEEE
Confidence 1111 2222 36 57999999997 555688888888888996443
No 148
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.54 E-value=0.075 Score=53.23 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=77.5
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc
Q 007820 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (588)
Q Consensus 394 ATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~ 473 (588)
-++.|+...++. .+.+++|++++|.|.|.+|+.+|+.|.+.| + |.|.++ +.+++..+.+.....
T Consensus 110 Td~~G~~~~L~~----~~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~-V~v~~r----------~~~~~~~l~~~~~~~ 173 (287)
T 1nvt_A 110 TDGIGARMALEE----EIGRVKDKNIVIYGAGGAARAVAFELAKDN-N-IIIANR----------TVEKAEALAKEIAEK 173 (287)
T ss_dssp CHHHHHHHHHHH----HHCCCCSCEEEEECCSHHHHHHHHHHTSSS-E-EEEECS----------SHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH----hCCCcCCCEEEEECchHHHHHHHHHHHHCC-C-EEEEEC----------CHHHHHHHHHHHhhh
Confidence 478888777653 456899999999999999999999999999 7 566766 223332232211110
Q ss_pred C--ChhhhhhccCCceEeCCCCccccccceeecCCCcCccch---h---hHHhhhhcCCeEEEecCCCC-CCHHHHHHHH
Q 007820 474 R--SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---S---DAINLVNSGCRILVEGSNMP-CTPEAVDVLK 544 (588)
Q Consensus 474 g--sL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~---e---nA~~l~~~~akiVvEgAN~P-~T~eA~~iL~ 544 (588)
+ .. .+ .....+-.+. -.++||+|-|+.-..... . +...+ + .-.+|++-.-+| .|+ -.+..+
T Consensus 174 ~~~~~-~~-----~~d~~~~~~~-~~~~DilVn~ag~~~~~~~~~~~~~~~~~l-~-~~~~v~Dv~y~p~~t~-ll~~a~ 243 (287)
T 1nvt_A 174 LNKKF-GE-----EVKFSGLDVD-LDGVDIIINATPIGMYPNIDVEPIVKAEKL-R-EDMVVMDLIYNPLETV-LLKEAK 243 (287)
T ss_dssp HTCCH-HH-----HEEEECTTCC-CTTCCEEEECSCTTCTTCCSSCCSSCSTTC-C-SSSEEEECCCSSSSCH-HHHHHH
T ss_pred ccccc-ce-----eEEEeeHHHh-hCCCCEEEECCCCCCCCCCCCCCCCCHHHc-C-CCCEEEEeeeCCccCH-HHHHHH
Confidence 0 00 00 0111111111 237899999986543210 0 11222 2 345777877666 454 445567
Q ss_pred HCCceEecc
Q 007820 545 KANVLIAPA 553 (588)
Q Consensus 545 ~rGI~viPD 553 (588)
++|+.++++
T Consensus 244 ~~G~~~~~G 252 (287)
T 1nvt_A 244 KVNAKTING 252 (287)
T ss_dssp TTTCEEECT
T ss_pred HCCCEEeCc
Confidence 788876654
No 149
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.48 E-value=0.097 Score=47.44 Aligned_cols=115 Identities=18% Similarity=0.141 Sum_probs=69.8
Q ss_pred CCCcEEEEecc----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 414 LKGLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 414 l~GkrVaIQGf----GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
++-++|+|+|. |++|..+++.|.+.|++|..+ ||.+ +++ ..+.- |+..
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v--------np~~---~~i----------~G~~~----~~s~--- 63 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--------NPNY---DEI----------EGLKC----YRSV--- 63 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--------CTTC---SEE----------TTEEC----BSSG---
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe--------CCCC---CeE----------CCeee----cCCH---
Confidence 45679999999 999999999999999985433 3332 000 00111 1111
Q ss_pred CCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceee
Q 007820 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAG 564 (588)
Q Consensus 490 ~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS 564 (588)
+++ ..++|+++-|... ....+-+..+++.+++.|+.-+- -.+.+..+..+++|+.++ =-|+=|++..
T Consensus 64 --~el-~~~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~~-~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 130 (138)
T 1y81_A 64 --REL-PKDVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQPG-AESEEIRRFLEKAGVEYS---FGRCIMVETS 130 (138)
T ss_dssp --GGS-CTTCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECTT-SCCHHHHHHHHHHTCEEE---CSCCHHHHC-
T ss_pred --HHh-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcCc-cHHHHHHHHHHHCCCEEE---cCCcceEEcc
Confidence 111 1267888877663 44445555555667776665432 247888899999999887 2356566554
No 150
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.48 E-value=0.031 Score=58.35 Aligned_cols=112 Identities=15% Similarity=0.127 Sum_probs=72.9
Q ss_pred cEEEEeccchHHHHHHHHHHHC---------CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---------GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~ 487 (588)
.||+|+|+|.+|+.-++.|.+. +++||+|+|. |.+++..+. ++|+...
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~----------~~~~a~~~a-------------~~~~~~~ 83 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ----------DQAMAERHA-------------AKLGAEK 83 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS----------SHHHHHHHH-------------HHHTCSE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC----------CHHHHHHHH-------------HHcCCCe
Confidence 5999999999999877777653 5789999997 344432221 1222222
Q ss_pred EeCC-CCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHH---HHCCceEec
Q 007820 488 YYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL---KKANVLIAP 552 (588)
Q Consensus 488 ~i~~-~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL---~~rGI~viP 552 (588)
..++ ++++ +.++|+++=|+ .+..+.+.+...++.|..++||=-=..+..||.+++ +++|+.+.-
T Consensus 84 ~y~d~~~ll~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 152 (412)
T 4gqa_A 84 AYGDWRELVNDPQVDVVDITS-PNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMV 152 (412)
T ss_dssp EESSHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EECCHHHHhcCCCCCEEEECC-CcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeee
Confidence 2332 4455 35789888654 577888888888888999999953233345565444 456765543
No 151
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.46 E-value=0.046 Score=55.52 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=72.8
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ 492 (588)
+-.||+|+|+|++|...++.|.+. ++.+++|+|. ++ +++..+. +. ++-.... +.+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~-----~~-----~~~~~~~---~~----------~~~~~~~~~~~ 60 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR-----RL-----ENAQKMA---KE----------LAIPVAYGSYE 60 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS-----SS-----HHHHHHH---HH----------TTCCCCBSSHH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC-----CH-----HHHHHHH---HH----------cCCCceeCCHH
Confidence 447999999999999999999884 7899999987 32 2221111 11 1110111 123
Q ss_pred Ccc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEeccc
Q 007820 493 KPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPAM 554 (588)
Q Consensus 493 eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD~ 554 (588)
+++ +.++|+++-|.. +..+.+.+...++.+..+++|--=.....++. +..+++|+.+...+
T Consensus 61 ~ll~~~~~D~V~i~tp-~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 61 ELCKDETIDIIYIPTY-NQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp HHHHCTTCSEEEECCC-GGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHhcCCCCCEEEEcCC-CHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 344 357899987664 45677777777788999999862111223343 34467787766544
No 152
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.46 E-value=0.028 Score=57.42 Aligned_cols=51 Identities=12% Similarity=0.066 Sum_probs=42.7
Q ss_pred CCCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcC
Q 007820 391 RTEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 391 r~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs 448 (588)
-...|.+|++..++. .+ ++|++|+|.|.|+ ||..+|..|..+|++ |+|+++
T Consensus 131 ~~PcTp~gv~~lL~~----~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAt-Vtv~~~ 182 (276)
T 3ngx_A 131 LVPATPRAVIDIMDY----YG--YHENTVTIVNRSPVVGRPLSMMLLNRNYT-VSVCHS 182 (276)
T ss_dssp SCCHHHHHHHHHHHH----HT--CCSCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred CCCCcHHHHHHHHHH----hC--cCCCEEEEEcCChHHHHHHHHHHHHCCCe-EEEEeC
Confidence 345899998766554 45 9999999999986 899999999999999 578776
No 153
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.46 E-value=0.095 Score=53.01 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=73.1
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccC
Q 007820 395 TGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR 474 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~g 474 (588)
-|+|.+.+++. .+ |++|+|.|.|.+|+.++..|.+.|.+ |.|.++ +++ ..++ |.+.
T Consensus 105 D~~Gf~~~L~~----~~----~k~vlvlGaGGaaraia~~L~~~G~~-v~V~nR-----t~~--ka~~---la~~----- 160 (269)
T 3phh_A 105 DALGFYLSLKQ----KN----YQNALILGAGGSAKALACELKKQGLQ-VSVLNR-----SSR--GLDF---FQRL----- 160 (269)
T ss_dssp HHHHHHHHCC-----------CCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS-----SCT--THHH---HHHH-----
T ss_pred hHHHHHHHHHH----cC----CCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC-----CHH--HHHH---HHHC-----
Confidence 36777666654 22 89999999999999999999999965 677776 332 1222 2211
Q ss_pred ChhhhhhccCCceEeCCCCccccccceeecCCCcC-----ccchhhHH-hhhhcCCeEEEecCCCCCCHHHHHHHHHCCc
Q 007820 475 SLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQN-----EIDQSDAI-NLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (588)
Q Consensus 475 sL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n-----~It~enA~-~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (588)
+.+..+.+++ . ++||+|-|..-. .++.+-.. .+ . ...+|++-.-.|-|+ -.+..+++|+
T Consensus 161 ----------~~~~~~~~~l-~-~~DiVInaTp~Gm~~~~~l~~~~l~~~l-~-~~~~v~D~vY~P~T~-ll~~A~~~G~ 225 (269)
T 3phh_A 161 ----------GCDCFMEPPK-S-AFDLIINATSASLHNELPLNKEVLKGYF-K-EGKLAYDLAYGFLTP-FLSLAKELKT 225 (269)
T ss_dssp ----------TCEEESSCCS-S-CCSEEEECCTTCCCCSCSSCHHHHHHHH-H-HCSEEEESCCSSCCH-HHHHHHHTTC
T ss_pred ----------CCeEecHHHh-c-cCCEEEEcccCCCCCCCCCChHHHHhhC-C-CCCEEEEeCCCCchH-HHHHHHHCcC
Confidence 1122222222 2 899999765543 34433111 22 2 356889999888443 5566678877
Q ss_pred eEecc
Q 007820 549 LIAPA 553 (588)
Q Consensus 549 ~viPD 553 (588)
.++++
T Consensus 226 ~~~~G 230 (269)
T 3phh_A 226 PFQDG 230 (269)
T ss_dssp CEECS
T ss_pred EEECC
Confidence 65543
No 154
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.45 E-value=0.038 Score=56.25 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=67.0
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
++|.++|.|++|...|+.|.+.|+.| .|-|. +.++...+.+ . +++..+.-.-..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v-~v~dr----------~~~~~~~l~~---~------------Ga~~a~s~~e~~ 57 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL-NVFDL----------VQSAVDGLVA---A------------GASAARSARDAV 57 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHHHH---T------------TCEECSSHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeE-EEEcC----------CHHHHHHHHH---c------------CCEEcCCHHHHH
Confidence 48999999999999999999999985 45554 3445432222 1 233322111123
Q ss_pred cccceeecCCCcCccchhhHH---hhhh--cCCeEEEecCCC-C-CCHHHHHHHHHCCceEe
Q 007820 497 ERCDVAFPCASQNEIDQSDAI---NLVN--SGCRILVEGSNM-P-CTPEAVDVLKKANVLIA 551 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA~---~l~~--~~akiVvEgAN~-P-~T~eA~~iL~~rGI~vi 551 (588)
..|||+|-|-.......+-.. .++. ..=++|++..+. | .+.+..+.+.++|+.|+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 479999988654322221111 0111 123678877776 4 56677789999999987
No 155
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.41 E-value=0.048 Score=56.69 Aligned_cols=105 Identities=15% Similarity=0.210 Sum_probs=66.6
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~--a~ 487 (588)
.||+|.|||.+|+-+++.|.+. ...||+|.|. .|.+.+..|+++....+.+....+. +.+ .+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~---------~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~ 72 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL---------LDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIR 72 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS---------SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC---------CChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEE
Confidence 4899999999999999999875 4789999875 2444544444443333433221100 000 01
Q ss_pred EeCC---CCc-c-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecC
Q 007820 488 YYDE---AKP-W-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS 531 (588)
Q Consensus 488 ~i~~---~ei-l-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgA 531 (588)
.+.. +++ | ...|||+|.|+ ..-.+.+.|..+++.|||+|.=.|
T Consensus 73 v~~~~dp~~i~w~~~~vDvVf~at-g~~~s~e~a~~~l~~GakvVdlSa 120 (330)
T 1gad_O 73 VTAERDPANLKWDEVGVDVVAEAT-GLFLTDETARKHITAGAKKVVMTG 120 (330)
T ss_dssp EECCSSGGGGCHHHHTCSEEEECS-SSCCSHHHHTHHHHTTCSEEEESS
T ss_pred EEEcCChhhCccccccCCEEEECC-CccccHHHHHHHHHCCCEEEEECC
Confidence 1222 222 5 35899999986 455778888888888999776554
No 156
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=95.37 E-value=0.022 Score=58.55 Aligned_cols=113 Identities=19% Similarity=0.160 Sum_probs=71.5
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ei 494 (588)
.||+|+|+|++|...++.|.+. ++++++|+|. +.++...+. +..+ +. +.....++ +++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~----------~~~~~~~~a---~~~~-~~------~~~~~~~~~~~l 66 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASR----------SLEKAKAFA---TANN-YP------ESTKIHGSYESL 66 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS----------SHHHHHHHH---HHTT-CC------TTCEEESSHHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHHHHHH---HHhC-CC------CCCeeeCCHHHH
Confidence 6899999999999888888875 6889999987 233322111 1111 00 01222222 345
Q ss_pred cc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCC-HHHH---HHHHHCCceEe
Q 007820 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCT-PEAV---DVLKKANVLIA 551 (588)
Q Consensus 495 l~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T-~eA~---~iL~~rGI~vi 551 (588)
+. .++|+++-|+ .+..+.+.+...++.+..+++|=- +-+| .++. +..+++|+.+.
T Consensus 67 l~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~V~~EKP-~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 67 LEDPEIDALYVPL-PTSLHVEWAIKAAEKGKHILLEKP-VAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp HHCTTCCEEEECC-CGGGHHHHHHHHHTTTCEEEECSS-CSSSHHHHHHHHHHHHTTTCCEE
T ss_pred hcCCCCCEEEEcC-ChHHHHHHHHHHHHCCCeEEEecC-CcCCHHHHHHHHHHHHHcCCEEE
Confidence 53 4799999876 566778888888888999999841 1123 3344 33456787665
No 157
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.37 E-value=0.018 Score=57.20 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=62.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +++ ++..+.+. ++...++.+-.-
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V-~~~dr-----~~~-----~~~~~~~~---------------g~~~~~~~~~~~ 55 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDV-TVWNR-----NPA-----KCAPLVAL---------------GARQASSPAEVC 55 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCE-EEECS-----SGG-----GGHHHHHH---------------TCEECSCHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeE-EEEcC-----CHH-----HHHHHHHC---------------CCeecCCHHHHH
Confidence 47999999999999999999999985 45565 332 22212211 122211111112
Q ss_pred cccceeecCCCcCccchhhH---Hhhh---hcCCeEEEecCCC-CCC-HHHHHHHHHCCceEec
Q 007820 497 ERCDVAFPCASQNEIDQSDA---INLV---NSGCRILVEGSNM-PCT-PEAVDVLKKANVLIAP 552 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA---~~l~---~~~akiVvEgAN~-P~T-~eA~~iL~~rGI~viP 552 (588)
.+||++|-|........+.. ..+. ..+ ++|+.-++. |.+ .+..+.+.++|+.|+.
T Consensus 56 ~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 56 AACDITIAMLADPAAAREVCFGANGVLEGIGGG-RGYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp HHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCEEEEEcCCHHHHHHHHcCchhhhhcccCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 37899999887653222222 2221 223 455555554 433 3455778889988764
No 158
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=95.33 E-value=0.071 Score=55.70 Aligned_cols=103 Identities=17% Similarity=0.276 Sum_probs=68.4
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~--a~ 487 (588)
.||.|-|||-+|+.+.+.+.+. ...||+|.|. -+|.+.+..|+++-...|.+..-.+. +.+ .+
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~--------~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~ 73 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDP--------FITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIA 73 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCC--------CCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 4899999999999999988876 4789999875 14777776676654444544321110 111 11
Q ss_pred Ee---CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEE
Q 007820 488 YY---DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (588)
Q Consensus 488 ~i---~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVv 528 (588)
.. ++++ .| +..+|+++.|+ +.-.+.+-|..-++.|||-|+
T Consensus 74 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVi 118 (332)
T 3pym_A 74 TYQERDPANLPWGSSNVDIAIDST-GVFKELDTAQKHIDAGAKKVV 118 (332)
T ss_dssp EECCSSGGGSCTTTTTCSEEEECS-SSSCSHHHHHHHHHTTCSEEE
T ss_pred EEeecccccCCccccCccEEEEec-ccccCHHHHHHHHHcCCCEEE
Confidence 11 1122 36 56899999997 555688888888888996443
No 159
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.31 E-value=0.031 Score=56.72 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=71.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCC---CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYG---AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~G---AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ 492 (588)
.||+|+|+|++|...++.|.+.+ +++++|+|. |.++...+.+ . +.-.... +-+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~----------~~~~a~~~a~---~----------~~~~~~~~~~~ 59 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR----------DLSRAKEFAQ---K----------HDIPKAYGSYE 59 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS----------SHHHHHHHHH---H----------HTCSCEESSHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC----------CHHHHHHHHH---H----------cCCCcccCCHH
Confidence 58999999999999888887653 589999987 3333321211 1 1111112 223
Q ss_pred Ccc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHH---HHHHHCCceEec
Q 007820 493 KPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAV---DVLKKANVLIAP 552 (588)
Q Consensus 493 eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~---~iL~~rGI~viP 552 (588)
+++ +.++|+++-|+ .+..+.+.+...++.+..+++|= |+ | .|+. +..+++|+.+.-
T Consensus 60 ~ll~~~~vD~V~i~t-p~~~H~~~~~~al~~GkhVl~EK---P~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 60 ELAKDPNVEVAYVGT-QHPQHKAAVMLCLAAGKAVLCEK---PMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp HHHHCTTCCEEEECC-CGGGHHHHHHHHHHTTCEEEEES---SSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHhcCCCCCEEEECC-CcHHHHHHHHHHHhcCCEEEEEC---CCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 455 35799999776 56678888888888899999994 42 2 3444 344677876653
No 160
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.29 E-value=0.089 Score=43.90 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=28.7
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCC-CeEEEEEcC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~G-AKVVaVSDs 448 (588)
..+++|+|.|.|.+|+.+++.|.+.| .+ |.+.|.
T Consensus 3 ~~~~~v~I~G~G~iG~~~~~~l~~~g~~~-v~~~~r 37 (118)
T 3ic5_A 3 AMRWNICVVGAGKIGQMIAALLKTSSNYS-VTVADH 37 (118)
T ss_dssp TTCEEEEEECCSHHHHHHHHHHHHCSSEE-EEEEES
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 35689999999999999999999999 66 455665
No 161
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.29 E-value=0.032 Score=58.01 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=46.1
Q ss_pred CCCCccHHHHHHHHHHH--HHH---hCCCCCCcEEEEeccch-HHHHHHHHHHHCCCeEEEEEcCC
Q 007820 390 LRTEATGYGLVFFAQLI--LAD---MNKELKGLRCVVSGSGK-IAMHVLEKLIAYGAIPVSVSDAK 449 (588)
Q Consensus 390 ~r~eATG~GV~~~i~~~--l~~---~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~GAKVVaVSDs~ 449 (588)
+-...|.+|++..++.. ++. .+.++.|++|+|.|.|+ ||..+|+.|...|++ |+|+|.+
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAt-Vtv~nR~ 210 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGAT-VYSVDVN 210 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCE-EEEECSS
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCE-EEEEeCc
Confidence 34568998886555442 000 57799999999999997 699999999999998 6788874
No 162
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.26 E-value=0.034 Score=60.70 Aligned_cols=118 Identities=10% Similarity=0.051 Sum_probs=71.3
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~e 493 (588)
.-++|.|+|+|++|..+|..|.+.|.+| .+.|. ++ +++..+.+.......+ ... +.++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V-~v~dr-----~~-----~~~~~l~~~g~~g~~i----------~~~~s~~e 61 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVV-CAFNR-----TV-----SKVDDFLANEAKGTKV----------VGAQSLKE 61 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCE-EEECS-----ST-----HHHHHHHHTTTTTSSC----------EECSSHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEE-EEEeC-----CH-----HHHHHHHhcccCCCce----------eccCCHHH
Confidence 3468999999999999999999999985 45565 22 3332222210000001 100 1112
Q ss_pred ccc--cccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCC--CCHHHHHHHHHCCceEecc
Q 007820 494 PWN--ERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAPA 553 (588)
Q Consensus 494 il~--~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P--~T~eA~~iL~~rGI~viPD 553 (588)
+.. .+||+++-|-.......+....|.. ..-.+|+.++|.. .|.+..+.|.++|+.|+.-
T Consensus 62 ~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 62 MVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp HHHTBCSSCEEEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhhccCCCEEEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC
Confidence 222 2689998887765433333444432 1346889999986 3555567889999988753
No 163
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=95.22 E-value=0.054 Score=56.72 Aligned_cols=103 Identities=20% Similarity=0.379 Sum_probs=68.1
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh------ccCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK------TYAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~------~~p~--a~ 487 (588)
.||+|-|||-+|+.+.+.+.+. ...||+|.|. +|.+.+..|+++-...|.+..-.+ .+.+ .+
T Consensus 5 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~---------~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~ 75 (338)
T 3lvf_P 5 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL---------TDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVK 75 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHHCCCceEEEEecC---------CCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEE
Confidence 5899999999999999988876 4688999873 467777667665444454332110 0111 11
Q ss_pred EeC---CCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEe
Q 007820 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (588)
Q Consensus 488 ~i~---~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (588)
... +++ .| +..+||++.|+ +.-.+.+-|...++.||| +|+-
T Consensus 76 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkViIS 122 (338)
T 3lvf_P 76 SFSEPDASKLPWKDLNIDVVLECT-GFYTDKDKAQAHIEAGAKKVLIS 122 (338)
T ss_dssp EECCSCGGGSCTTTTTCSEEEECS-SSCCBHHHHHHHHHTTCSEEEES
T ss_pred EEEecccccCCccccCCCEEEEcc-CCcCCHHHHHHHHHcCCCEEEEC
Confidence 111 112 36 56899999997 555788888888888996 4443
No 164
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.21 E-value=0.027 Score=57.64 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=42.9
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEeccch-HHHHHHHHHHHC--CCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSGSGK-IAMHVLEKLIAY--GAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGN-VG~~aAe~L~e~--GAKVVaVSDs 448 (588)
...|.+|++..+ ++.+.+++|++|+|.|.|+ ||..+|.+|.+. |++ |+++++
T Consensus 138 ~PcTp~gi~~ll----~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~at-Vtv~h~ 192 (281)
T 2c2x_A 138 LPCTPRGIVHLL----RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENAT-VTLCHT 192 (281)
T ss_dssp CCHHHHHHHHHH----HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCE-EEEECT
T ss_pred CCChHHHHHHHH----HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCE-EEEEEC
Confidence 458888865554 4558899999999999997 699999999999 888 567765
No 165
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.21 E-value=0.08 Score=55.11 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=64.0
Q ss_pred cEEEEeccchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh----c--cCC--
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR-- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~---GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~----~--~p~-- 485 (588)
+||+|.|||-+|+-+++.|.+. ...||+|.|. .|++.+..++.+....|.+..-.. . +.+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~---------~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~ 71 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL---------TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKE 71 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS---------SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC---------CChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeE
Confidence 4899999999999999998876 4899999884 245554444443333333211000 0 001
Q ss_pred ceEe---CCCCc-cc-cccceeecCCCcCccchhhHHhhhhcCCe-EEEe
Q 007820 486 SKYY---DEAKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (588)
Q Consensus 486 a~~i---~~~ei-l~-~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (588)
.+.. +++++ |. ..|||+|.|+ ..-.+.+.|..+++.||| +|+.
T Consensus 72 i~v~~~~dp~~l~w~~~~vDvV~~at-g~~~s~e~a~~~l~aGakkvVId 120 (332)
T 1hdg_O 72 IKVFAEPDPSKLPWKDLGVDFVIEST-GVFRNREKAELHLQAGAKKVIIT 120 (332)
T ss_dssp EEEECCSSGGGSCHHHHTCCEEEECS-SSCCBHHHHTHHHHTTCSEEEES
T ss_pred EEEEecCChHHCcccccCCCEEEECC-ccchhHHHHHHHHHcCCcEEEEe
Confidence 1122 12222 53 4899999986 455678888888888884 5544
No 166
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=95.20 E-value=0.055 Score=56.79 Aligned_cols=108 Identities=14% Similarity=0.251 Sum_probs=67.9
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR 485 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~ 485 (588)
.+...||+|-|||-+|+-+++.+.+.. ..||+|.|. -.|.+.+..|+++....|.+.+-.+. +.+
T Consensus 8 ~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~--------~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~G 79 (345)
T 2b4r_O 8 HMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDP--------FMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGE 79 (345)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT--------TCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESS
T ss_pred chhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCC--------CCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECC
Confidence 356689999999999999999987754 689999984 12566555555554444443221100 001
Q ss_pred --ceEeC---CCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEEe
Q 007820 486 --SKYYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVE 529 (588)
Q Consensus 486 --a~~i~---~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvE 529 (588)
.+... +++ .| +..+||++.|+ +.-++.+.|...++.||| +|+-
T Consensus 80 k~i~v~~~~dp~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakkVVIs 130 (345)
T 2b4r_O 80 KKVSVFAEKDPSQIPWGKCQVDVVCEST-GVFLTKELASSHLKGGAKKVIMS 130 (345)
T ss_dssp CEEEEECCSSGGGCCHHHHTCSEEEECS-SSCCSHHHHTHHHHTTCSEEEES
T ss_pred EEEEEEEcCCcccCcccccCCCEEEECc-CccccHhhHHHHHHCCCCEEEEC
Confidence 01111 111 34 35899999987 667788888888888997 4554
No 167
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.19 E-value=0.3 Score=49.13 Aligned_cols=128 Identities=13% Similarity=0.190 Sum_probs=79.2
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc
Q 007820 394 ATGYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ 473 (588)
Q Consensus 394 ATG~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~ 473 (588)
-.+.|...+++ ..+.+ .+++|+|.|.|.+|+.++..|.+.|++-|.|.++ +.++...|.+.
T Consensus 102 TD~~G~~~~l~----~~~~~-~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR----------t~~ka~~la~~---- 162 (271)
T 1npy_A 102 TDYIAIVKLIE----KYHLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR----------NVKTGQYLAAL---- 162 (271)
T ss_dssp HHHHHHHHHHH----HTTCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS----------CHHHHHHHHHH----
T ss_pred CCHHHHHHHHH----HhCCC-CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHHH----
Confidence 34566666654 34544 6789999999999999999999999865778776 23443223221
Q ss_pred CChhhhhhccCCceEeCCCCccccccceeecCCCcCccch---h----hHHhhhhcCCeEEEecCCCCCCHHHHHHHHHC
Q 007820 474 RSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQ---S----DAINLVNSGCRILVEGSNMPCTPEAVDVLKKA 546 (588)
Q Consensus 474 gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~---e----nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~r 546 (588)
+ +..+.+... ..++||+|-|..-..... + +...| . ...+|++-.-.|....-.+.-+++
T Consensus 163 -----~-----~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~~~~~~~~l-~-~~~~v~DlvY~P~~T~ll~~A~~~ 228 (271)
T 1npy_A 163 -----Y-----GYAYINSLE--NQQADILVNVTSIGMKGGKEEMDLAFPKAFI-D-NASVAFDVVAMPVETPFIRYAQAR 228 (271)
T ss_dssp -----H-----TCEEESCCT--TCCCSEEEECSSTTCTTSTTTTSCSSCHHHH-H-HCSEEEECCCSSSSCHHHHHHHHT
T ss_pred -----c-----CCccchhhh--cccCCEEEECCCCCccCccccCCCCCCHHHc-C-CCCEEEEeecCCCCCHHHHHHHHC
Confidence 1 011111111 247999998877544211 1 11222 1 356899999888433555667788
Q ss_pred CceEeccc
Q 007820 547 NVLIAPAM 554 (588)
Q Consensus 547 GI~viPD~ 554 (588)
|+.++++.
T Consensus 229 G~~~i~Gl 236 (271)
T 1npy_A 229 GKQTISGA 236 (271)
T ss_dssp TCEEECHH
T ss_pred CCEEECCH
Confidence 88776544
No 168
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=95.18 E-value=0.077 Score=54.42 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=72.1
Q ss_pred CCCcEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
...++++|.|.|..|...++.|.+ .+.+.|.|.|. +.++...+.+.....+ + ... .+.
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r----------~~~~a~~la~~~~~~~-~--------~~~-~~~~ 182 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV----------REKAAKKFVSYCEDRG-I--------SAS-VQPA 182 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS----------SHHHHHHHHHHHHHTT-C--------CEE-ECCH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC----------CHHHHHHHHHHHHhcC-c--------eEE-ECCH
Confidence 367899999999999999998877 46777888876 3444433332111100 0 122 222
Q ss_pred CCccccccceeecCCCcCc--cchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEe
Q 007820 492 AKPWNERCDVAFPCASQNE--IDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n~--It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~vi 551 (588)
++.+ ++||++-|+.... ++. ..++.++-+++.|+..|...|.+..+.+++..|+
T Consensus 183 ~e~v--~aDvVi~aTp~~~pv~~~----~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v 238 (322)
T 1omo_A 183 EEAS--RCDVLVTTTPSRKPVVKA----EWVEEGTHINAIGADGPGKQELDVEILKKAKIVV 238 (322)
T ss_dssp HHHT--SSSEEEECCCCSSCCBCG----GGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred HHHh--CCCEEEEeeCCCCceecH----HHcCCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence 2333 7999999887532 221 2246699999999999977776655666666555
No 169
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.18 E-value=0.044 Score=59.44 Aligned_cols=118 Identities=10% Similarity=-0.009 Sum_probs=70.8
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE- 491 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~- 491 (588)
.+..++|.|.|.|++|..+|..|.+.|..| .+.|. +.+++..+.+ ..+ + +++...++
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V-~v~~r----------~~~~~~~l~~---~~~---~-----~gi~~~~s~ 69 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTV-SIFNR----------SREKTEEVIA---ENP---G-----KKLVPYYTV 69 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCE-EEECS----------SHHHHHHHHH---HST---T-----SCEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeE-EEEeC----------CHHHHHHHHh---hCC---C-----CCeEEeCCH
Confidence 356679999999999999999999999985 45554 3344432322 110 0 12221111
Q ss_pred CCcccc--ccceeecCCCcCccchhhHHhhhh-c-CCeEEEecCCCC--CCHHHHHHHHHCCceEec
Q 007820 492 AKPWNE--RCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (588)
Q Consensus 492 ~eil~~--dcDILIPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P--~T~eA~~iL~~rGI~viP 552 (588)
++.... +||++|-|-.......+....|.. . .-.+|+..+|.. .|.+..+.|.++|+.++.
T Consensus 70 ~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 70 KEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp HHHHHTBCSSCEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCCCCCEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeC
Confidence 122221 489999887765433444444432 1 235888999986 345556788888998873
No 170
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.18 E-value=0.052 Score=58.43 Aligned_cols=135 Identities=13% Similarity=0.192 Sum_probs=75.7
Q ss_pred HhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccC-----Chhhhhhc-
Q 007820 409 DMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR-----SLRDYSKT- 482 (588)
Q Consensus 409 ~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~g-----sL~~y~~~- 482 (588)
..++..+-++|+|.|.|.||..+|..|.+ |..|+ +.|. |.+++..+. +... .+.++...
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~-~~D~----------~~~~v~~l~---~g~~~i~e~~l~~ll~~~ 93 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVV-ALDI----------VQAKVDMLN---QKISPIVDKEIQEYLAEK 93 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEE-EECS----------CHHHHHHHH---TTCCSSCCHHHHHHHHHS
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEE-EEec----------CHHHhhHHh---ccCCccccccHHHHHhhc
Confidence 34455566799999999999999999987 98865 4554 344433222 1110 11111110
Q ss_pred cCCceEeCCCCccccccceeecCCCcCcc------c----h---hhHHhhhhcCCeEEEecCCCC-CCHHHHHHHHHCCc
Q 007820 483 YARSKYYDEAKPWNERCDVAFPCASQNEI------D----Q---SDAINLVNSGCRILVEGSNMP-CTPEAVDVLKKANV 548 (588)
Q Consensus 483 ~p~a~~i~~~eil~~dcDILIPcA~~n~I------t----~---enA~~l~~~~akiVvEgAN~P-~T~eA~~iL~~rGI 548 (588)
..+.+..++-+-.-.+||++|-|...+.- + . +.+.. ++.++-+|.+..--| +|.+..+.|.+.++
T Consensus 94 ~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 94 PLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp CCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred cCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 01122222101112489999988776521 1 1 11222 345777777777666 45666778888899
Q ss_pred eEeccccccccC
Q 007820 549 LIAPAMAAGAGG 560 (588)
Q Consensus 549 ~viPD~laNAGG 560 (588)
.+.|.++ +.|+
T Consensus 173 ~~sPe~~-~~G~ 183 (432)
T 3pid_A 173 IFSPEFL-REGR 183 (432)
T ss_dssp EECCCCC-CTTS
T ss_pred eecCccC-Ccch
Confidence 9999886 4454
No 171
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=95.10 E-value=0.018 Score=58.44 Aligned_cols=108 Identities=15% Similarity=0.127 Sum_probs=67.1
Q ss_pred CCcEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~e 493 (588)
+-.||+|+|+|++|...++.|.+ .+.++++|+|. +++ .+ .. .| +. | ..+ ++
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~-----~~~-----~~---~~----~g-~~-~-------~~~--~~ 59 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR-----NPA-----EV---PF----EL-QP-F-------RVV--SD 59 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC------------------------CC-TT-S-------CEE--SS
T ss_pred CCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC-----CHH-----HH---HH----cC-CC-c-------CCH--HH
Confidence 34699999999999999999887 47899999987 333 21 10 11 10 1 111 12
Q ss_pred ccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCC-CCCCHHH---HHHHHHCCceEe
Q 007820 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN-MPCTPEA---VDVLKKANVLIA 551 (588)
Q Consensus 494 il~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN-~P~T~eA---~~iL~~rGI~vi 551 (588)
+.+ .++|+++-|+. +..+.+.+..+++.+..+|+|--- .+...++ .+..+++|+.+.
T Consensus 60 l~~~~~~DvViiatp-~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~ 121 (304)
T 3bio_A 60 IEQLESVDVALVCSP-SREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAV 121 (304)
T ss_dssp GGGSSSCCEEEECSC-HHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEE
T ss_pred HHhCCCCCEEEECCC-chhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 222 58999998774 556678888888889999998211 1122233 344566786543
No 172
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.08 E-value=0.17 Score=46.11 Aligned_cols=114 Identities=14% Similarity=0.104 Sum_probs=67.7
Q ss_pred CcEEEEecc----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-
Q 007820 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (588)
Q Consensus 416 GkrVaIQGf----GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~- 490 (588)
-++|+|+|. |++|..+++.|.+.|++|..+ ||+.. ...+. +....+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~v--------np~~~--------------g~~i~-------G~~~~~s 63 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPV--------SPKVA--------------GKTLL-------GQQGYAT 63 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEE--------CSSST--------------TSEET-------TEECCSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEe--------CCccc--------------ccccC-------CeeccCC
Confidence 468999999 899999999999999984333 33210 00000 111111
Q ss_pred CCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceee
Q 007820 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAG 564 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS 564 (588)
.+++ ..++|+++-|... ....+.+..+++.+++.|+=-. +-.+.+..+.++++|+.++ =-|+=|++..
T Consensus 64 l~el-~~~~Dlvii~vp~-~~v~~v~~~~~~~g~~~i~i~~-~~~~~~l~~~a~~~Gi~~i---gpnc~g~~~~ 131 (145)
T 2duw_A 64 LADV-PEKVDMVDVFRNS-EAAWGVAQEAIAIGAKTLWLQL-GVINEQAAVLAREAGLSVV---MDRCPAIELP 131 (145)
T ss_dssp TTTC-SSCCSEEECCSCS-THHHHHHHHHHHHTCCEEECCT-TCCCHHHHHHHHTTTCEEE---CSCCHHHHST
T ss_pred HHHc-CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcC-ChHHHHHHHHHHHcCCEEE---cCCeeeEEcc
Confidence 1222 2367888887663 4444445555555666444222 2246788899999999988 1355555544
No 173
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.06 E-value=0.061 Score=54.64 Aligned_cols=116 Identities=10% Similarity=0.036 Sum_probs=73.8
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHC--------CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAY--------GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR 485 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~--------GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~ 485 (588)
++..||+|+|+|.+|..-++.+.+. ++.|++|+|. |.+++..+. ++|+.
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~----------~~~~a~~~a-------------~~~g~ 60 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR----------DAEAVRAAA-------------GKLGW 60 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS----------SHHHHHHHH-------------HHHTC
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC----------CHHHHHHHH-------------HHcCC
Confidence 4456999999999998766666543 3589999997 334432121 11222
Q ss_pred ceEeCC-CCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---H---HHCCceEecc
Q 007820 486 SKYYDE-AKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---L---KKANVLIAPA 553 (588)
Q Consensus 486 a~~i~~-~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L---~~rGI~viPD 553 (588)
....++ ++++ +.++|+++=|+ .+..+.+.+...++.|..++||=-=..+..||+++ . +++|+.+...
T Consensus 61 ~~~~~d~~~ll~~~~iDaV~I~t-P~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~ 135 (390)
T 4h3v_A 61 STTETDWRTLLERDDVQLVDVCT-PGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVG 135 (390)
T ss_dssp SEEESCHHHHTTCTTCSEEEECS-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcccCCHHHHhcCCCCCEEEEeC-ChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEE
Confidence 222222 4455 45789888765 56778888888888899999995323334667665 3 3367765543
No 174
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.06 E-value=0.027 Score=56.59 Aligned_cols=108 Identities=14% Similarity=0.127 Sum_probs=64.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|.|.|+|++|..+|+.|.+.|..| .+.|. +++-++ + +.+ . +++..++ +++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V-~~~dr-----~~~~~~--~---~~~---~------------g~~~~~~~~~~~ 69 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGV-TVYDI-----RIEAMT--P---LAE---A------------GATLADSVADVA 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCE-EEECS-----STTTSH--H---HHH---T------------TCEECSSHHHHT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeE-EEEeC-----CHHHHH--H---HHH---C------------CCEEcCCHHHHH
Confidence 68999999999999999999999985 45566 444221 1 111 1 2222211 2233
Q ss_pred ccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCC-CC-CHHHHHHHHHCCceEec
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNM-PC-TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~-P~-T~eA~~iL~~rGI~viP 552 (588)
. ||++|-|........+....+.. ..-++|+..++. |. +.+..+.+.++|+.|+.
T Consensus 70 ~--aDvvi~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 70 A--ADLIHITVLDDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp T--SSEEEECCSSHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE
T ss_pred h--CCEEEEECCChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 4 99999988754333333333322 122455555554 43 34455777888988763
No 175
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=95.05 E-value=0.045 Score=57.46 Aligned_cols=102 Identities=15% Similarity=0.273 Sum_probs=67.3
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc------cCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT------YAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~------~p~--a~ 487 (588)
.||+|-|||-+|+.+.+.+.+. ...||+|.|. .|.+.+..|+++-...|.+..-.+. +.+ .+
T Consensus 5 ~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~---------~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~ 75 (345)
T 4dib_A 5 TRVAINGFGRIGRMVFRQAIKESAFEIVAINAS---------YPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIR 75 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEE
T ss_pred EEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC---------CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 4899999999999999988775 4789999875 4777776666654444433221100 111 11
Q ss_pred EeC---CCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEE
Q 007820 488 YYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (588)
Q Consensus 488 ~i~---~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVv 528 (588)
... +++ .| +..+||++.|+ +.-.+.+-|...++.|||-|+
T Consensus 76 v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVi 120 (345)
T 4dib_A 76 LLNNRDPKELPWTDLGVEVVIEAT-GKFNSKEKAILHVEAGAKKVI 120 (345)
T ss_dssp EECCSCGGGSCTTTTTEEEEEECS-SSCCBHHHHTHHHHTTCSEEE
T ss_pred EeecCChhhCCccccCccEEEEec-cCcCCHHHHHHHHHCCCCEEE
Confidence 111 111 36 56899999997 555688888888888996443
No 176
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.01 E-value=0.021 Score=57.48 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=68.9
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ei 494 (588)
.||+|+|+|++|...++.|.+. +.++++|+|. +.+++ . .+.+. .... +.+++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~----------~~~~~---~----------~~~~~---~~~~~~~~~~ 64 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASS----------NPDNL---A----------LVPPG---CVIESDWRSV 64 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES----------CHHHH---T----------TCCTT---CEEESSTHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC----------CHHHH---H----------HHHhh---CcccCCHHHH
Confidence 6899999999999999988885 6889999987 22221 0 01000 1112 22345
Q ss_pred cc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCH-HHH---HHHHHCCceEec
Q 007820 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP-EAV---DVLKKANVLIAP 552 (588)
Q Consensus 495 l~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~-eA~---~iL~~rGI~viP 552 (588)
+. .++|+++-|.. +..+.+.+...++.+..+++|-- .-+|. ++. +..+++|+.+..
T Consensus 65 l~~~~~D~V~i~tp-~~~h~~~~~~al~~Gk~v~~eKP-~~~~~~~~~~l~~~a~~~g~~~~~ 125 (315)
T 3c1a_A 65 VSAPEVEAVIIATP-PATHAEITLAAIASGKAVLVEKP-LTLDLAEAEAVAAAAKATGVMVWV 125 (315)
T ss_dssp HTCTTCCEEEEESC-GGGHHHHHHHHHHTTCEEEEESS-SCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred hhCCCCCEEEEeCC-hHHHHHHHHHHHHCCCcEEEcCC-CcCCHHHHHHHHHHHHHcCCEEEE
Confidence 53 58999998875 55667777777778888999841 11233 333 334567776553
No 177
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.01 E-value=0.028 Score=56.85 Aligned_cols=118 Identities=13% Similarity=0.163 Sum_probs=74.9
Q ss_pred CcEEEEec-cchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
-.||+|.| +|++|+.+++.+.+ .+..+|++.|+++.- ..|.|..++ .... ++....++ +
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~--~~G~d~gel-------------~g~~---~gv~v~~dl~ 68 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP--QLGQDAGAF-------------LGKQ---TGVALTDDIE 68 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT--TTTSBTTTT-------------TTCC---CSCBCBCCHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc--cccccHHHH-------------hCCC---CCceecCCHH
Confidence 36999999 89999999998876 478999999985421 135444332 1110 11111111 1
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHH----CCceEecccc
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKK----ANVLIAPAMA 555 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~----rGI~viPD~l 555 (588)
+++. ++||+|-++... ...+++...++++..+|++- -..+++..+.|++ .++++.|.+.
T Consensus 69 ~ll~-~~DVVIDfT~p~-a~~~~~~~al~~G~~vVigT--TG~s~~~~~~L~~aa~~~~vv~a~N~s 131 (272)
T 4f3y_A 69 RVCA-EADYLIDFTLPE-GTLVHLDAALRHDVKLVIGT--TGFSEPQKAQLRAAGEKIALVFSANMS 131 (272)
T ss_dssp HHHH-HCSEEEECSCHH-HHHHHHHHHHHHTCEEEECC--CCCCHHHHHHHHHHTTTSEEEECSCCC
T ss_pred HHhc-CCCEEEEcCCHH-HHHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHhccCCEEEECCCC
Confidence 2233 799999998544 34567777788899999843 3467765555543 3567776653
No 178
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.01 E-value=0.082 Score=56.17 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=31.2
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+.+++|+|.|+|.+|..+|+.+..+|++ |.+.|.
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~ 215 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAK-TTGYDV 215 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCE-EEEECS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCE-EEEEeC
Confidence 36889999999999999999999999998 557776
No 179
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.97 E-value=0.059 Score=58.27 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=71.6
Q ss_pred CCcEEEEeccchHHHHHHHHHHH----------CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIA----------YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA 484 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e----------~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p 484 (588)
+-.+|+|.|+|+||+.+++.|.+ .+.+|++|+|++ .++...+ . +
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~----------~~~~~~~---~-------------~ 62 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN----------LDKAEAL---A-------------G 62 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC----------HHHHHHH---H-------------T
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC----------HHHhhhh---c-------------c
Confidence 45699999999999999987764 467899999982 2221101 0 1
Q ss_pred CceEeC-CCCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEe
Q 007820 485 RSKYYD-EAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIA 551 (588)
Q Consensus 485 ~a~~i~-~~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~vi 551 (588)
+..+.+ .++++ +.++|+++.|......+.+.+...++.|..+|+|=- .++..++. +..+++|+.+.
T Consensus 63 ~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenk-al~a~~~~eL~~~A~~~gv~l~ 133 (444)
T 3mtj_A 63 GLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTANK-HLVAKYGNEIFAAAQAKGVMVT 133 (444)
T ss_dssp TCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCc-ccCHHHHHHHHHHHHHhCCeEE
Confidence 111222 23444 358899999987767777877777788999998732 12222333 44467787763
No 180
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.95 E-value=0.033 Score=49.62 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=29.9
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|+|.|.|++|+.+++.|.+.|++ |.+.|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 89999999999999999999999999 888876
No 181
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.93 E-value=0.055 Score=56.35 Aligned_cols=104 Identities=16% Similarity=0.250 Sum_probs=64.8
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh----c--cCC--ce
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK----T--YAR--SK 487 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~----~--~p~--a~ 487 (588)
.||+|.|||-+|+-+.+.|.+. ...||+|.|. .|.+.+..++++....|.+..-.. . +.+ .+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~---------~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~ 72 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL---------TDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEII 72 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS---------SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC---------CCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEE
Confidence 4899999999999999999876 5789999884 244444444443333333211000 0 001 12
Q ss_pred Ee---CCCCc-cc-cccceeecCCCcCccchhhHHhhhhcCCe-EEEec
Q 007820 488 YY---DEAKP-WN-ERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEG 530 (588)
Q Consensus 488 ~i---~~~ei-l~-~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvEg 530 (588)
.. +++++ |. ..|||+|.|+ ..-.+.+.|..+++.||| +|+.+
T Consensus 73 v~~~~dp~~i~w~~~~vDvV~~at-g~~~s~e~a~~~l~~Gak~vVId~ 120 (334)
T 3cmc_O 73 VKAERDPENLAWGEIGVDIVVEST-GRFTKREDAAKHLEAGAKKVIISA 120 (334)
T ss_dssp EECCSSGGGCCTGGGTCCEEEECS-SSCCBHHHHTHHHHTTCSEEEESS
T ss_pred EEecCChhhcCcccCccCEEEECC-CchhhHHHHHHHHHCCCCEEEEeC
Confidence 22 12223 63 5899999986 455778888888888884 55543
No 182
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.89 E-value=0.12 Score=54.14 Aligned_cols=117 Identities=15% Similarity=0.085 Sum_probs=70.8
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD- 490 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~- 490 (588)
.+-.+++|+|.|.|++|+.+|+.|.+. .. |+|.|. +.+++..+. ...+ ...++
T Consensus 12 ~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~-V~V~~R----------~~~~a~~la---~~~~-----------~~~~d~ 65 (365)
T 2z2v_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDE-FD-VYIGDV----------NNENLEKVK---EFAT-----------PLKVDA 65 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTT-SE-EEEEES----------CHHHHHHHT---TTSE-----------EEECCT
T ss_pred ccCCCCeEEEEcCCHHHHHHHHHHHcC-Ce-EEEEEC----------CHHHHHHHH---hhCC-----------eEEEec
Confidence 344678999999999999999999887 65 678877 344442221 1100 00111
Q ss_pred -C-CCc--cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC-CCCHHHHHHHHHCCceEeccccc
Q 007820 491 -E-AKP--WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM-PCTPEAVDVLKKANVLIAPAMAA 556 (588)
Q Consensus 491 -~-~ei--l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~-P~T~eA~~iL~~rGI~viPD~la 556 (588)
+ +++ +-.++|++|-|+.. ..+.+-+...++.++.+|- -++. +-+.+-.+..+++|+.++|+.=.
T Consensus 66 ~~~~~l~~ll~~~DvVIn~~P~-~~~~~v~~a~l~~G~~~vD-~s~~~~~~~~l~~~Ak~aG~~~l~g~G~ 134 (365)
T 2z2v_A 66 SNFDKLVEVMKEFELVIGALPG-FLGFKSIKAAIKSKVDMVD-VSFMPENPLELRDEAEKAQVTIVFDAGF 134 (365)
T ss_dssp TCHHHHHHHHTTCSCEEECCCH-HHHHHHHHHHHHTTCCEEE-CCCCSSCGGGGHHHHHHTTCEEECSCBT
T ss_pred CCHHHHHHHHhCCCEEEECCCh-hhhHHHHHHHHHhCCeEEE-ccCCcHHHHHHHHHHHHcCCEEEECCCC
Confidence 0 111 11379999998543 3444455555667877665 4444 34445577788999999876533
No 183
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=94.87 E-value=0.016 Score=59.75 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=61.2
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHh--hccCChh----hhhhccCCceEe
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSLR----DYSKTYARSKYY 489 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k--~~~gsL~----~y~~~~p~a~~i 489 (588)
.||+|.|+|.+|+..++.|.+. +..+++|+|++ ++ .+..+.+.. ...+.+. .+... +....
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~-----~~-----~~~~~~~~~g~~~~~~~~~~v~~~~~~--~~~v~ 70 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTK-----PD-----FEAYRAKELGIPVYAASEEFIPRFEKE--GFEVA 70 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESS-----CS-----HHHHHHHHTTCCEEESSGGGHHHHHHH--TCCCS
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCC-----HH-----HHHHHHHhcCccccccccccceeccCC--ceEEc
Confidence 4899999999999999999875 57999999972 22 111112111 0001110 00000 00100
Q ss_pred -CCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 490 -DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 490 -~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
+.++++. ++|+++-|+ .+..+.+.+...++.|+++|+|+-.
T Consensus 71 ~d~~~l~~-~vDvV~~aT-p~~~h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 71 GTLNDLLE-KVDIIVDAT-PGGIGAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp CBHHHHHT-TCSEEEECC-STTHHHHHHHHHHHHTCEEEECTTS
T ss_pred CcHHHhcc-CCCEEEECC-CccccHHHHHHHHHcCCceEeeccc
Confidence 1122333 899999986 4556677777777889999998643
No 184
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.85 E-value=0.046 Score=55.85 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=72.4
Q ss_pred CCcEEEEeccc-hHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 415 KGLRCVVSGSG-KIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 415 ~GkrVaIQGfG-NVG~~aAe~L~e~--GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
+-.||+|+|+| .+|...+..|.+. ++++++|+|. |.+++..+.+ .|+.....++
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~~~~a~-------------~~~~~~~~~~ 73 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR----------TRSHAEEFAK-------------MVGNPAVFDS 73 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS----------SHHHHHHHHH-------------HHSSCEEESC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC----------CHHHHHHHHH-------------HhCCCcccCC
Confidence 45799999999 7998888888775 6899999997 3334321211 1111122222
Q ss_pred -CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---HHHCCceEe
Q 007820 492 -AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLIA 551 (588)
Q Consensus 492 -~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGI~vi 551 (588)
++++. .++|+++-|+ .+..+.+.+...++.|..+++|=-=.....|+.++ .+++|+.+.
T Consensus 74 ~~~ll~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~ 137 (340)
T 1zh8_A 74 YEELLESGLVDAVDLTL-PVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVY 137 (340)
T ss_dssp HHHHHHSSCCSEEEECC-CGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHhcCCCCCEEEEeC-CchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 34553 4799999877 45677888888888899999994111122444433 357787654
No 185
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.84 E-value=0.081 Score=56.15 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=74.2
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC---
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD--- 490 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~--- 490 (588)
+-.||+|+|+|++|...++.|.+. |++|++|+|. +.+++..+.+.... + .+|.....+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~----------~~~~~~~~a~~~~~------~--g~~~~~~~~~~~ 80 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP----------DPYMVGRAQEILKK------N--GKKPAKVFGNGN 80 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS----------CHHHHHHHHHHHHH------T--TCCCCEEECSST
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC----------CHHHHHHHHHHHHh------c--CCCCCceeccCC
Confidence 457999999999999888888774 7899999997 33443222221101 1 112233332
Q ss_pred --CCCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHHH---HHHHCCceEe
Q 007820 491 --EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAVD---VLKKANVLIA 551 (588)
Q Consensus 491 --~~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~~---iL~~rGI~vi 551 (588)
-++++. .++|+++-|+. +..+.+.+...++.+..+++| -|+ | .++.+ ..+++|+.+.
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp-~~~h~~~~~~al~aGkhV~~E---KP~a~~~~ea~~l~~~a~~~g~~~~ 146 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSP-WEWHHEHGVAAMKAGKIVGME---VSGAITLEECWDYVKVSEQTGVPLM 146 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCC-GGGHHHHHHHHHHTTCEEEEC---CCCCSSHHHHHHHHHHHHHHCCCEE
T ss_pred CCHHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCeEEEe---CCCcCCHHHHHHHHHHHHHhCCeEE
Confidence 234554 47999998875 557788888888889999999 353 3 33443 3356787554
No 186
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=94.84 E-value=0.028 Score=57.53 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=71.0
Q ss_pred cEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 417 LRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 417 krVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
.||+|+|+|++|. ..+..|.+. +++|++|+|++ ..+++ .+. | ..++....++ ++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~---------~~~~~---a~~---------~--~~~~~~~~~~~~~ 59 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH---------VNEKA---AAP---------F--KEKGVNFTADLNE 59 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT---------CCHHH---HHH---------H--HTTTCEEESCTHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC---------HHHHH---HHh---------h--CCCCCeEECCHHH
Confidence 5899999999998 566666554 78999999984 11221 110 0 0023333332 44
Q ss_pred ccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 494 il~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
++. .++|+++-|+. +..+.+.+...++.+..+++|=-=.....++. +..+++|+.+...
T Consensus 60 ll~~~~~D~V~i~tp-~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 122 (349)
T 3i23_A 60 LLTDPEIELITICTP-AHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPY 122 (349)
T ss_dssp HHSCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HhcCCCCCEEEEeCC-cHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 553 47999998774 56778888888888999999732111223444 3446778766543
No 187
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=94.83 E-value=0.024 Score=57.84 Aligned_cols=108 Identities=18% Similarity=0.257 Sum_probs=70.4
Q ss_pred cEEEEeccchHHHH-HHH-HHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 417 LRCVVSGSGKIAMH-VLE-KLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 417 krVaIQGfGNVG~~-aAe-~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
.||+|+|+|++|.. .+. .|.. .++++++|+|. +++-. + .. ..+++....++ +
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~-----~~~~~---~------------~~----~~~~~~~~~~~~~ 58 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR-----HAKPE---E------------QA----PIYSHIHFTSDLD 58 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS-----SCCGG---G------------GS----GGGTTCEEESCTH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC-----CHhHH---H------------HH----HhcCCCceECCHH
Confidence 58999999999984 555 4333 47899999998 44321 0 01 11234444433 4
Q ss_pred Cccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHH---HHHHHCCceEec
Q 007820 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAV---DVLKKANVLIAP 552 (588)
Q Consensus 493 eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~---~iL~~rGI~viP 552 (588)
+++. .++|+++-|. .+..+.+.+...++.+..+++| -|+ | .++. +..+++|+.+..
T Consensus 59 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v 121 (345)
T 3f4l_A 59 EVLNDPDVKLVVVCT-HADSHFEYAKRALEAGKNVLVE---KPFTPTLAQAKELFALAKSKGLTVTP 121 (345)
T ss_dssp HHHTCTTEEEEEECS-CGGGHHHHHHHHHHTTCEEEEC---SSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHhcCCCCCEEEEcC-ChHHHHHHHHHHHHcCCcEEEe---CCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 4554 4799999877 5567788888888899999999 342 2 3343 344667876653
No 188
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.80 E-value=0.066 Score=54.52 Aligned_cols=110 Identities=17% Similarity=0.225 Sum_probs=70.5
Q ss_pred cEEEEeccchHHHHHHHHHH-H-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccC-CceEeCC-C
Q 007820 417 LRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYYDE-A 492 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~-e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p-~a~~i~~-~ 492 (588)
.||+|+|+|++|...++.|. + .++++++|+|. |.+++..+. +. ++ .....++ +
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~----------~~~~~~~~~---~~----------~g~~~~~~~~~~ 59 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV----------NQEAAQKVV---EQ----------YQLNATVYPNDD 59 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS----------SHHHHHHHH---HH----------TTCCCEEESSHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHHHHHH---HH----------hCCCCeeeCCHH
Confidence 58999999999999999888 4 57899999987 333332111 11 11 1222222 3
Q ss_pred Cccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---HHHCCceE
Q 007820 493 KPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLI 550 (588)
Q Consensus 493 eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGI~v 550 (588)
+++. .++|+++-|. .+..+.+.+...++.+..+++|=-=.....++.++ .+++|+.+
T Consensus 60 ~ll~~~~~D~V~i~t-p~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 60 SLLADENVDAVLVTS-WGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp HHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred HHhcCCCCCEEEECC-CchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 4453 4789999877 56677788888888898999985222222444433 35667644
No 189
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=94.76 E-value=0.13 Score=50.71 Aligned_cols=112 Identities=11% Similarity=-0.036 Sum_probs=64.9
Q ss_pred CcEEEEeccchHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEA 492 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~--GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ 492 (588)
-++|.|.|+|++|..+|..|.+. |.. |.+.|. +.+.+..+.+ .+... ... +.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~----------~~~~~~~~~~----~g~~~---------~~~~~~~ 61 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYK-IVGYNR----------SDRSRDIALE----RGIVD---------EATADFK 61 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECS----------SHHHHHHHHH----TTSCS---------EEESCTT
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcE-EEEEcC----------CHHHHHHHHH----cCCcc---------cccCCHH
Confidence 36899999999999999999988 456 455555 2333322211 11100 111 222
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhc---CCeEEEecCCCCC--CHHHHHHHHHCCceEecc
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNS---GCRILVEGSNMPC--TPEAVDVLKKANVLIAPA 553 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~---~akiVvEgAN~P~--T~eA~~iL~~rGI~viPD 553 (588)
+.+ .+||++|-|.....+ .+-...+... .-.+|+..+|... +....+.|.++++.++|.
T Consensus 62 ~~~-~~aDvVilavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~ 125 (290)
T 3b1f_A 62 VFA-ALADVIILAVPIKKT-IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGS 125 (290)
T ss_dssp TTG-GGCSEEEECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEE
T ss_pred Hhh-cCCCEEEEcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEe
Confidence 333 489999999887665 4444444221 2357777777643 223334444447878774
No 190
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=94.75 E-value=0.056 Score=56.09 Aligned_cols=108 Identities=17% Similarity=0.219 Sum_probs=68.6
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+.++.|+||.|.|+|++|+.+|+.+...|.+|++. | +..- +.. .+ .+.++.+
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~-d-------~~~~--~~~---~~---------------~~~~~~~ 187 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY-D-------VVKR--EDL---KE---------------KGCVYTS 187 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE-C-------SSCC--HHH---HH---------------TTCEECC
T ss_pred cceecCcEEEEECcchHHHHHHHhhcccCceeeec-C-------Cccc--hhh---hh---------------cCceecC
Confidence 45789999999999999999999999999998754 3 2211 110 00 0122222
Q ss_pred CCCccccccceeecCC-----CcCccchhhHHhhhhcCCeEEEecCCCC-CCHHHH-HHHHHCCce
Q 007820 491 EAKPWNERCDVAFPCA-----SQNEIDQSDAINLVNSGCRILVEGSNMP-CTPEAV-DVLKKANVL 549 (588)
Q Consensus 491 ~~eil~~dcDILIPcA-----~~n~It~enA~~l~~~~akiVvEgAN~P-~T~eA~-~iL~~rGI~ 549 (588)
-++++ ..|||++-+. +.+.|+.+.-.++ +.+| +++--|=++ +..+|- +.|++..|.
T Consensus 188 l~ell-~~sDivslh~Plt~~T~~li~~~~l~~m-k~~a-~lIN~aRG~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 188 LDELL-KESDVISLHVPYTKETHHMINEERISLM-KDGV-YLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHHH-HHCSEEEECCCCCTTTTTCBCHHHHHHS-CTTE-EEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred HHHHH-hhCCEEEEcCCCChhhccCcCHHHHhhc-CCCe-EEEecCccccccHHHHHHHHHhCCce
Confidence 22232 3678886653 4577888877776 3344 566777777 555554 666665543
No 191
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.70 E-value=0.031 Score=57.47 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=62.7
Q ss_pred CcEEEEeccchHHHHHHHHHHH--CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CC-
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIA--YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DE- 491 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e--~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~- 491 (588)
-.||+|.|+|+||+.+++.|.+ .++++++|+|. +++- +..+ +.+ . + +.... ++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~-----~~~~-~~~~---~a~---~----------~-g~~~~~~~~ 60 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI-----DAAS-DGLA---RAQ---R----------M-GVTTTYAGV 60 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS-----CTTC-HHHH---HHH---H----------T-TCCEESSHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC-----Chhh-hHHH---HHH---H----------c-CCCcccCCH
Confidence 3689999999999999999965 57899999997 4431 0011 111 1 1 11111 11
Q ss_pred CCccc----cccceeecCCCcCccchhhHHhhhhc--CCeEEEecC
Q 007820 492 AKPWN----ERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEGS 531 (588)
Q Consensus 492 ~eil~----~dcDILIPcA~~n~It~enA~~l~~~--~akiVvEgA 531 (588)
++++. .++|+++-|+. +..+.+.+...++. |+.+|+|-.
T Consensus 61 e~ll~~~~~~~iDvV~~atp-~~~h~~~a~~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 61 EGLIKLPEFADIDFVFDATS-ASAHVQNEALLRQAKPGIRLIDLTP 105 (312)
T ss_dssp HHHHHSGGGGGEEEEEECSC-HHHHHHHHHHHHHHCTTCEEEECST
T ss_pred HHHHhccCCCCCcEEEECCC-hHHHHHHHHHHHHhCCCCEEEEcCc
Confidence 22332 47899999987 77888989888888 999999753
No 192
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=94.70 E-value=0.077 Score=55.31 Aligned_cols=113 Identities=12% Similarity=0.155 Sum_probs=72.2
Q ss_pred CCCcEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCC--ceEeC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYAR--SKYYD 490 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~--a~~i~ 490 (588)
.+.++++|.|.|..|...++.|.. .+.+-|.|.|. +.++...+.+.... +++ ....+
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r----------~~~~a~~la~~~~~----------~~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT----------DPLATAKLIANLKE----------YSGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS----------SHHHHHHHHHHHTT----------CTTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------CHHHHHHHHHHHHh----------ccCceEEEeC
Confidence 467899999999999998887654 56666778776 34444333321110 012 11121
Q ss_pred C-CCccccccceeecCCCcC----ccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEe
Q 007820 491 E-AKPWNERCDVAFPCASQN----EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (588)
Q Consensus 491 ~-~eil~~dcDILIPcA~~n----~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~vi 551 (588)
. ++.+ .+|||+|-|+... .+..+ .++.++-+++.|+..|-..|.+..+.+++..|+
T Consensus 187 ~~~eav-~~aDiVi~aTps~~~~pvl~~~----~l~~G~~V~~vgs~~p~~~El~~~~~~~a~v~v 247 (350)
T 1x7d_A 187 SVAEAV-KGVDIITTVTADKAYATIITPD----MLEPGMHLNAVGGDCPGKTELHADVLRNARVFV 247 (350)
T ss_dssp SHHHHH-TTCSEEEECCCCSSEEEEECGG----GCCTTCEEEECSCCBTTBEEECHHHHHTSEEEE
T ss_pred CHHHHH-hcCCEEEEeccCCCCCceecHH----HcCCCCEEEECCCCCCCceeeCHHHHhcCcEEE
Confidence 1 1122 3799999988754 33332 235699999999999977776666777787555
No 193
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=94.69 E-value=0.062 Score=57.08 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=70.5
Q ss_pred CCcEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CC
Q 007820 415 KGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DE 491 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~ 491 (588)
+-.||+|+|+|++|+ ..++.|.+. ++++++|+|. |.+++..+. +..+ +.. .+.... +.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~----------~~~~~~~~a---~~~g-~~~-----~~~~~~~~~ 142 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG----------NAEKAKIVA---AEYG-VDP-----RKIYDYSNF 142 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS----------CHHHHHHHH---HHTT-CCG-----GGEECSSSG
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC----------CHHHHHHHH---HHhC-CCc-----ccccccCCH
Confidence 346999999999997 777777764 6889999987 233332121 1111 000 001111 22
Q ss_pred CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHH---HHHHHCCceEec
Q 007820 492 AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAV---DVLKKANVLIAP 552 (588)
Q Consensus 492 ~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~---~iL~~rGI~viP 552 (588)
++++. .++|+++-|.. +..+.+.+...++.+..+++|= |+ | .++. +..+++|+.+..
T Consensus 143 ~~ll~~~~vD~V~iatp-~~~h~~~~~~al~aGk~Vl~EK---Pla~~~~e~~~l~~~a~~~g~~~~v 206 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILP-NSLHAEFAIRAFKAGKHVMCEK---PMATSVADCQRMIDAAKAANKKLMI 206 (433)
T ss_dssp GGGGGCTTCCEEEECSC-GGGHHHHHHHHHHTTCEEEECS---SCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCCCCEEEEcCC-chhHHHHHHHHHHCCCcEEEcC---CCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 44553 57999998874 5567777877778898999983 42 3 3343 333567876643
No 194
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=94.69 E-value=0.056 Score=55.67 Aligned_cols=114 Identities=22% Similarity=0.254 Sum_probs=70.9
Q ss_pred CCCCcEEEEeccchHHHHHHHHHH-H-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccC-CceEe
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLI-A-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYY 489 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~-e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p-~a~~i 489 (588)
+.+-.||+|+|+|++|...++.|. + .++.+++|+|. +++ ++..+.+ . +. .....
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~-----~~~-----~~~~~a~---~----------~g~~~~~~ 76 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI-----VAG-----RAQAALD---K----------YAIEAKDY 76 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS-----STT-----HHHHHHH---H----------HTCCCEEE
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC-----CHH-----HHHHHHH---H----------hCCCCeee
Confidence 445579999999999999888887 4 47899999997 443 2211111 1 11 12222
Q ss_pred CC-CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---HHHCCceE
Q 007820 490 DE-AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVLI 550 (588)
Q Consensus 490 ~~-~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGI~v 550 (588)
++ ++++. .++|+++-|+ .+..+.+.+...++.+..+++|=-=.....++.++ .+++|+.+
T Consensus 77 ~~~~~ll~~~~~D~V~i~t-p~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 77 NDYHDLINDKDVEVVIITA-SNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp SSHHHHHHCTTCCEEEECS-CGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CCHHHHhcCCCCCEEEEcC-CcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 22 34453 4789999766 55677888888888899999985111122344433 35667643
No 195
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=94.67 E-value=0.046 Score=55.83 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=62.5
Q ss_pred CcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~e 493 (588)
-.||+|.|+||+|+..++.|.+. +..+++++|.+ ++. ++ . + +.... +.++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~-----~~~----~~---~-----------~-----gv~~~~d~~~ 54 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR-----ATL----DT---K-----------T-----PVFDVADVDK 54 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS-----SCC----SS---S-----------S-----CEEEGGGGGG
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC-----HHH----hh---c-----------C-----CCceeCCHHH
Confidence 36899999999999999998876 68999999973 221 11 0 0 11111 1133
Q ss_pred ccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHH
Q 007820 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA 539 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA 539 (588)
++ .++|+++-|.... .+.+.+...++.+..+|+|-.=....+++
T Consensus 55 ll-~~~DvViiatp~~-~h~~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 55 HA-DDVDVLFLCMGSA-TDIPEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TT-TTCSEEEECSCTT-THHHHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred Hh-cCCCEEEEcCCcH-HHHHHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 44 5899999887554 35677777778899999986433333444
No 196
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.67 E-value=0.14 Score=54.85 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=31.2
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+.+.+|+|.|+|.+|..+|+.+..+|++ |.+.|.
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~-V~v~D~ 221 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAV-VSATDV 221 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEcC
Confidence 46789999999999999999999999998 457776
No 197
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.033 Score=60.30 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=69.6
Q ss_pred hCCCCCCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
.+.++++++|+|.|.|.+|+.+++.|.+. |.+ |.|.|. +.+++..+.+ ..+ +. ...
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~-V~v~~R----------~~~ka~~la~---~~~-~~--------~~~ 73 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDIN-VTVACR----------TLANAQALAK---PSG-SK--------AIS 73 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEE-EEEEES----------SHHHHHHHHG---GGT-CE--------EEE
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCe-EEEEEC----------CHHHHHHHHH---hcC-Cc--------EEE
Confidence 45688999999999999999999999998 566 677776 2334322221 111 10 000
Q ss_pred eCCC---Ccc--ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEecccccc
Q 007820 489 YDEA---KPW--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAG 557 (588)
Q Consensus 489 i~~~---eil--~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laN 557 (588)
++-. ++- -.++|++|-|+... .+..-+...++.++.++......|.+.+..+..+++|+.+++..-.+
T Consensus 74 ~D~~d~~~l~~~l~~~DvVIn~tp~~-~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~ 146 (467)
T 2axq_A 74 LDVTDDSALDKVLADNDVVISLIPYT-FHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLD 146 (467)
T ss_dssp CCTTCHHHHHHHHHTSSEEEECSCGG-GHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBT
T ss_pred EecCCHHHHHHHHcCCCEEEECCchh-hhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcC
Confidence 1110 111 13799999998643 22223333344577777643333433444566778899988777543
No 198
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=94.66 E-value=0.055 Score=56.29 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=70.7
Q ss_pred cEEEEeccc-hHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCC
Q 007820 417 LRCVVSGSG-KIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (588)
Q Consensus 417 krVaIQGfG-NVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~e 493 (588)
.||+|+|+| ++|...+..|.+. ++++++|+|. +.++...+.+ . + +....+ .++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~----------~~~~~~~~a~---------~----~-g~~~~~~~~e 58 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP----------NEDVRERFGK---------E----Y-GIPVFATLAE 58 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS----------CHHHHHHHHH---------H----H-TCCEESSHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC----------CHHHHHHHHH---------H----c-CCCeECCHHH
Confidence 689999999 8998888888774 7899999987 3333321111 1 1 222222 244
Q ss_pred ccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEec
Q 007820 494 PWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAP 552 (588)
Q Consensus 494 il~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viP 552 (588)
++. .++|+++-|.. +..+.+.+...++.+..+++|=-=.....++. +..+++|+.+..
T Consensus 59 ll~~~~vD~V~i~tp-~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 120 (387)
T 3moi_A 59 MMQHVQMDAVYIASP-HQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVV 120 (387)
T ss_dssp HHHHSCCSEEEECSC-GGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEE
Confidence 553 47999997765 56778888888888999999841111123343 344667776543
No 199
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.61 E-value=0.079 Score=52.42 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=63.6
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|.|.|+|++|..+++.|.+.|..| .+.|. +.+++..+ .+. +....+. ++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~~----------~~~~~~~~---~~~------------g~~~~~~~~~~~ 58 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTV-YAFDL----------MEANVAAV---VAQ------------GAQACENNQKVA 58 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEE-EEECS----------SHHHHHHH---HTT------------TCEECSSHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeE-EEEeC----------CHHHHHHH---HHC------------CCeecCCHHHHH
Confidence 68999999999999999999999985 46665 23333211 111 1111111 1112
Q ss_pred ccccceeecCCCcCccchhhH------HhhhhcCCeEEEecCCCC--CCHHHHHHHHHCCceEec
Q 007820 496 NERCDVAFPCASQNEIDQSDA------INLVNSGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA------~~l~~~~akiVvEgAN~P--~T~eA~~iL~~rGI~viP 552 (588)
.+||++|-|.....-..+.. ...+..+ ++|+.-+|+. .+.+..+.+.++|+.++.
T Consensus 59 -~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~-~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~ 121 (301)
T 3cky_A 59 -AASDIIFTSLPNAGIVETVMNGPGGVLSACKAG-TVIVDMSSVSPSSTLKMAKVAAEKGIDYVD 121 (301)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTT-CEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -hCCCEEEEECCCHHHHHHHHcCcchHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 37999999885433222211 1111223 4677777775 334455677788988763
No 200
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=94.55 E-value=0.044 Score=56.00 Aligned_cols=86 Identities=16% Similarity=0.263 Sum_probs=54.2
Q ss_pred CCCCcEEEEeccchHHH-HHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-
Q 007820 413 ELKGLRCVVSGSGKIAM-HVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY- 489 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~-~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i- 489 (588)
+++-.||+|+|+|++|. ..++.|.+. +++|++|+|.+..- .|+ ...
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~---~g~----------------------------~~~~ 70 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV---EGV----------------------------NSYT 70 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC---TTS----------------------------EEES
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh---cCC----------------------------CccC
Confidence 34567999999999998 567777764 78999999984211 111 111
Q ss_pred CCCCccc--cccceeecCCCcCccchhhHHhhhhcCCeEEEec
Q 007820 490 DEAKPWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (588)
Q Consensus 490 ~~~eil~--~dcDILIPcA~~n~It~enA~~l~~~~akiVvEg 530 (588)
+-++++. .++|+++-|+. +..+.+.+...++.|..+++|=
T Consensus 71 ~~~~ll~~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK 112 (330)
T 4ew6_A 71 TIEAMLDAEPSIDAVSLCMP-PQYRYEAAYKALVAGKHVFLEK 112 (330)
T ss_dssp SHHHHHHHCTTCCEEEECSC-HHHHHHHHHHHHHTTCEEEECS
T ss_pred CHHHHHhCCCCCCEEEEeCC-cHHHHHHHHHHHHcCCcEEEeC
Confidence 1122332 35677665543 5556666666666677777763
No 201
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.55 E-value=0.028 Score=55.59 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=31.9
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~ 449 (588)
|++++|+|.|.|.+|..+|+.|.+.|..-|.|.|.+
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 467899999999999999999999998667888874
No 202
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.50 E-value=0.074 Score=53.90 Aligned_cols=114 Identities=16% Similarity=0.126 Sum_probs=64.7
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
-++|.|+|+|++|..+|+.|.+.|..-|.+.|. ++ +.+++..+.+ . ++...+...-.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr-----~~---~~~~~~~~~~----~-----------g~~~~~~~~e~ 80 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDA-----AS---AESWRPRAEE----L-----------GVSCKASVAEV 80 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECS-----SC---HHHHHHHHHH----T-----------TCEECSCHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcC-----CC---CHHHHHHHHH----C-----------CCEEeCCHHHH
Confidence 469999999999999999999999823566666 21 1222211111 1 22222111111
Q ss_pred ccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCC-CC-CHHHHHHHHHC--CceEecc
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNM-PC-TPEAVDVLKKA--NVLIAPA 553 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~-P~-T~eA~~iL~~r--GI~viPD 553 (588)
-.+|||+|-|-....... .+..+.. ..-++|+.-... |. +.+..+.+.++ |+.|+..
T Consensus 81 ~~~aDvVi~~vp~~~~~~-~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~ 143 (312)
T 3qsg_A 81 AGECDVIFSLVTAQAALE-VAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAV 143 (312)
T ss_dssp HHHCSEEEECSCTTTHHH-HHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HhcCCEEEEecCchhHHH-HHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEec
Confidence 247999999877665432 3344432 122456655443 43 34445667777 8887643
No 203
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.48 E-value=0.14 Score=50.94 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=60.9
Q ss_pred cEEEEecc-chHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCc
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ei 494 (588)
+||+|.|+ |.+|+.+++.+.+. +..++++.|.. + |.+++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~------~--dl~~~------------------------------- 41 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG------D--PLSLL------------------------------- 41 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT------C--CTHHH-------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC------C--CHHHH-------------------------------
Confidence 47999996 99999999998865 89999999873 1 11111
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHH
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVL 543 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL 543 (588)
+..++|++|.++.... ..+++...+++++.+|++-. ..+++..+.|
T Consensus 42 ~~~~~DvvIDfT~p~a-~~~~~~~a~~~g~~~VigTT--G~~~e~~~~l 87 (245)
T 1p9l_A 42 TDGNTEVVIDFTHPDV-VMGNLEFLIDNGIHAVVGTT--GFTAERFQQV 87 (245)
T ss_dssp HHTTCCEEEECSCTTT-HHHHHHHHHHTTCEEEECCC--CCCHHHHHHH
T ss_pred hccCCcEEEEccChHH-HHHHHHHHHHcCCCEEEcCC--CCCHHHHHHH
Confidence 1125799999886554 46777777788999999865 2666644444
No 204
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.44 E-value=0.091 Score=51.78 Aligned_cols=35 Identities=31% Similarity=0.460 Sum_probs=31.3
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|+|.|.||...++.|.+.|++|+-|+
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 48999999999999999999999999999965443
No 205
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=94.44 E-value=0.08 Score=55.43 Aligned_cols=103 Identities=14% Similarity=0.224 Sum_probs=68.0
Q ss_pred cEEEEeccchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhh-hhh-------ccCC--
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD-YSK-------TYAR-- 485 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~-y~~-------~~p~-- 485 (588)
.||+|-|||-+|+.+.+.+.+.+ ..||+|.|. .+|.+.+..|+++-...|++.. -.+ .+.+
T Consensus 4 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~--------~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~ 75 (337)
T 3v1y_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDP--------FITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKP 75 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECT--------TSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEE
T ss_pred eEEEEECCChHHHHHHHHHHhCCCcEEEEEeCC--------CCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEE
Confidence 58999999999999999888764 688999875 2477777667665444454432 110 0111
Q ss_pred ceEeC---CCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEE
Q 007820 486 SKYYD---EAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILV 528 (588)
Q Consensus 486 a~~i~---~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVv 528 (588)
.+... +++ .| +..+||++.|+ +.-.+.+-|...++.|||-|+
T Consensus 76 I~v~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~a~~hl~aGAkkVi 122 (337)
T 3v1y_O 76 VTVFGIRNPDEIPWAEAGAEYVVEST-GVFTDKEKAAAHLKGGAKKVV 122 (337)
T ss_dssp EEEECCSSGGGCCHHHHTCCEEEECS-SSCCSHHHHTHHHHTTCCEEE
T ss_pred EEEEEecCcccCCccccCCcEEEEec-cccCCHHHHHHHHHcCCCEEE
Confidence 11111 111 36 46899999997 555688888888888997443
No 206
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=94.40 E-value=0.12 Score=46.79 Aligned_cols=113 Identities=18% Similarity=0.050 Sum_probs=63.5
Q ss_pred CcEEEEecc----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCC--CCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 416 GLRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDED--GFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 416 GkrVaIQGf----GNVG~~aAe~L~e~GAKVVaVSDs~G~Iydpd--GLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
-++|+|+|. |++|..+++.|.+.|++|..| ||. + ..+.+. .-|+....+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v--------np~~~~----------------~~i~G~-~~~~sl~el 67 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV--------NPRFQG----------------EELFGE-EAVASLLDL 67 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE--------CGGGTT----------------SEETTE-ECBSSGGGC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe--------CCCccc----------------CcCCCE-EecCCHHHC
Confidence 468999999 899999999999999985444 332 1 001000 011211111
Q ss_pred CCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCceee
Q 007820 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVVAG 564 (588)
Q Consensus 490 ~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVivS 564 (588)
..++|+++-|... ....+-++.+++.+++.|+=-+- -.+.++.++.+++|+.++ --|+=|++..
T Consensus 68 ------~~~vDlavi~vp~-~~~~~v~~~~~~~gi~~i~~~~g-~~~~~~~~~a~~~Gir~v---gpnc~g~~~~ 131 (140)
T 1iuk_A 68 ------KEPVDILDVFRPP-SALMDHLPEVLALRPGLVWLQSG-IRHPEFEKALKEAGIPVV---ADRCLMVEHK 131 (140)
T ss_dssp ------CSCCSEEEECSCH-HHHTTTHHHHHHHCCSCEEECTT-CCCHHHHHHHHHTTCCEE---ESCCHHHHHH
T ss_pred ------CCCCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcCC-cCHHHHHHHHHHcCCEEE---cCCccceECh
Confidence 1256766655443 12222233333446665553221 246888899999999877 2355555443
No 207
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.34 E-value=0.073 Score=53.05 Aligned_cols=120 Identities=18% Similarity=0.136 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCC
Q 007820 396 GYGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS 475 (588)
Q Consensus 396 G~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gs 475 (588)
|+|.+.++++ . +++| +|+|.|.|++|+.++..|.+.|++-|.|.++ +.++.. ++.
T Consensus 95 ~~G~~~~l~~----~--~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR----------~~~ka~---~la----- 149 (253)
T 3u62_A 95 WVGVVKSLEG----V--EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNR----------TIERAK---ALD----- 149 (253)
T ss_dssp HHHHHHHTTT----C--CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEES----------CHHHHH---TCC-----
T ss_pred HHHHHHHHHh----c--CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeC----------CHHHHH---HHH-----
Confidence 4565555432 2 5789 9999999999999999999999844677776 233321 111
Q ss_pred hhhhhhccCCceEeCCCCcc--ccccceeecCCCcC------ccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCC
Q 007820 476 LRDYSKTYARSKYYDEAKPW--NERCDVAFPCASQN------EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKAN 547 (588)
Q Consensus 476 L~~y~~~~p~a~~i~~~eil--~~dcDILIPcA~~n------~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rG 547 (588)
+.+. .... +++- -.++||+|-|..-. .++ ...+ . ...+|++-+-+ .|+-.. ..+++|
T Consensus 150 -----~~~~-~~~~--~~~~~~~~~aDiVInatp~gm~p~~~~i~---~~~l-~-~~~~V~Divy~-~T~ll~-~A~~~G 214 (253)
T 3u62_A 150 -----FPVK-IFSL--DQLDEVVKKAKSLFNTTSVGMKGEELPVS---DDSL-K-NLSLVYDVIYF-DTPLVV-KARKLG 214 (253)
T ss_dssp -----SSCE-EEEG--GGHHHHHHTCSEEEECSSTTTTSCCCSCC---HHHH-T-TCSEEEECSSS-CCHHHH-HHHHHT
T ss_pred -----HHcc-cCCH--HHHHhhhcCCCEEEECCCCCCCCCCCCCC---HHHh-C-cCCEEEEeeCC-CcHHHH-HHHHCC
Confidence 1110 0011 1111 13789999665422 222 2223 2 45688887766 565443 445678
Q ss_pred ce-Eecccc
Q 007820 548 VL-IAPAMA 555 (588)
Q Consensus 548 I~-viPD~l 555 (588)
+. ++|+.-
T Consensus 215 ~~~~~~Gl~ 223 (253)
T 3u62_A 215 VKHIIKGNL 223 (253)
T ss_dssp CSEEECTHH
T ss_pred CcEEECCHH
Confidence 87 776643
No 208
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.30 E-value=0.072 Score=54.51 Aligned_cols=118 Identities=9% Similarity=0.087 Sum_probs=75.5
Q ss_pred cEEEEec-cchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
.||+|.| +|++|+.+++.+.+ .+..+|++.|.++. +..|.|..++ .+.. ..+....++ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~--~~~G~d~gel-------------~G~~--~~gv~v~~dl~~ 84 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS--SFVDKDASIL-------------IGSD--FLGVRITDDPES 84 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC--TTTTSBGGGG-------------TTCS--CCSCBCBSCHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc--cccccchHHh-------------hccC--cCCceeeCCHHH
Confidence 6999999 99999999998875 57899999998542 1235555432 1100 012221111 22
Q ss_pred ccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHH----HCCceEecccc
Q 007820 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLK----KANVLIAPAMA 555 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~----~rGI~viPD~l 555 (588)
++. ++||+|-++.... ..+++...++.+..+|++-. ..+++..+.|+ +.++++.|.+.
T Consensus 85 ll~-~aDVvIDFT~p~a-~~~~~~~~l~~Gv~vViGTT--G~~~e~~~~L~~aa~~~~~~~a~N~S 146 (288)
T 3ijp_A 85 AFS-NTEGILDFSQPQA-SVLYANYAAQKSLIHIIGTT--GFSKTEEAQIADFAKYTTIVKSGNMS 146 (288)
T ss_dssp HTT-SCSEEEECSCHHH-HHHHHHHHHHHTCEEEECCC--CCCHHHHHHHHHHHTTSEEEECSCCC
T ss_pred Hhc-CCCEEEEcCCHHH-HHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHHhCcCCEEEECCCc
Confidence 333 7999999886443 46777888888999998642 35665443343 34677777653
No 209
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=94.30 E-value=0.06 Score=55.92 Aligned_cols=100 Identities=14% Similarity=0.206 Sum_probs=61.4
Q ss_pred cEEEEeccchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh-----ccC--CceE
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK-----TYA--RSKY 488 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~-----~~p--~a~~ 488 (588)
.||+|.|+|.+|+.+++.|.+. +..+++|+|. +++ ....+... .+ +.-|.. .+. +...
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~-----~~~-----~~~~~a~~---~g-~~~~~~~~~~~~~~~~~v~v 67 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT-----SPN-----YEAFIAHR---RG-IRIYVPQQSIKKFEESGIPV 67 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS-----SCS-----HHHHHHHH---TT-CCEECCGGGHHHHHTTTCCC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC-----ChH-----HHHHHHHh---cC-cceecCcCHHHHhccccccc
Confidence 4899999999999999999875 6799999986 222 11111111 00 000000 000 0000
Q ss_pred eCC-CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 489 YDE-AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 489 i~~-~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
.+. ++++ .++|+++.|+ ....+.+.+....+.++++|.-+++
T Consensus 68 ~~~~e~l~-~~vDvV~~aT-p~~~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 68 AGTVEDLI-KTSDIVVDTT-PNGVGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp CCCHHHHH-HHCSEEEECC-STTHHHHHHHHHHHTTCEEEECTTS
T ss_pred ccCHhHhh-cCCCEEEECC-CCchhHHHHHHHHHcCCeEEEeCCC
Confidence 000 0111 2799999985 5667778888888889999999998
No 210
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.28 E-value=0.039 Score=59.76 Aligned_cols=128 Identities=12% Similarity=0.138 Sum_probs=77.1
Q ss_pred CCcEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHh-hccC------Chhhhhh--ccC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQR------SLRDYSK--TYA 484 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k-~~~g------sL~~y~~--~~p 484 (588)
+-.||.|+|+|.+|+..++.+.+ .+.+|++|+|. +++ +.....+.. .... +..+..+ ..+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~-----~~e-----ra~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g 91 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR-----RLP-----NTFKAIRTAYGDEENAREATTESAMTRAIEAG 91 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS-----STH-----HHHHHHHHHHSSSTTEEECSSHHHHHHHHHTT
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC-----CHH-----HHHHHHHHhcCCccccccccchhhhhhhhccC
Confidence 44799999999999998887765 47899999998 332 321111100 0000 0000000 001
Q ss_pred CceEeCC-CCccc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHH-H---HHHHHHCCceEeccc
Q 007820 485 RSKYYDE-AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPE-A---VDVLKKANVLIAPAM 554 (588)
Q Consensus 485 ~a~~i~~-~eil~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~e-A---~~iL~~rGI~viPD~ 554 (588)
.....++ ++++. .++|+++-|+.......+.+..-++.|..+|++ |-+++.+ + .+.-+++|+.+.+..
T Consensus 92 ~~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~--nk~l~~~eg~eL~~~A~e~Gvvl~~~~ 165 (446)
T 3upl_A 92 KIAVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM--NVEADVTIGPYLKAQADKQGVIYSLGA 165 (446)
T ss_dssp CEEEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC--CHHHHHHHHHHHHHHHHHHTCCEEECT
T ss_pred CceEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec--CcccCHHHHHHHHHHHHHhCCeeeecC
Confidence 1222333 34554 479999999876556677777777889999985 5454432 2 344467899887655
No 211
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.25 E-value=0.03 Score=58.09 Aligned_cols=103 Identities=13% Similarity=0.204 Sum_probs=61.7
Q ss_pred cEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHh--hccCChhhhhhccC--CceEeCC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK--SQQRSLRDYSKTYA--RSKYYDE 491 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k--~~~gsL~~y~~~~p--~a~~i~~ 491 (588)
.||+|.|+|.+|+.+++.|.+ .+..+++|.|. +++ ....+.... ...+.+.+....+. +.. +.+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~-----~~~-----~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~-v~~ 70 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT-----RPD-----FEARMALKKGYDLYVAIPERVKLFEKAGIE-VAG 70 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES-----SCS-----HHHHHHHHTTCCEEESSGGGHHHHHHTTCC-CCE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC-----Chh-----HHHHhcCCcchhhccccccceeeecCCceE-EcC
Confidence 489999999999999999987 56899999986 221 111112111 00011110000000 000 111
Q ss_pred --CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 492 --AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 492 --~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
++++ .++||++-|+. ...+.+.+...++.|+++|.+++-
T Consensus 71 ~~~~~~-~~vDvV~~atp-~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 71 TVDDML-DEADIVIDCTP-EGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp EHHHHH-HTCSEEEECCS-TTHHHHHHHHHHHHTCCEEECTTS
T ss_pred CHHHHh-cCCCEEEECCC-chhhHHHHHHHHHcCCEEEEecCC
Confidence 1122 37999999875 456677888888889999998875
No 212
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=94.22 E-value=0.14 Score=53.65 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=64.7
Q ss_pred CCcEEEEec-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 415 KGLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 415 ~GkrVaIQG-fGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
+..||+|.| +|.+|+.+++.|.+.. ..+++|.|. .+.|...+.. .+.+.... ..+....+ +
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-----~~~g~~~~~~---------~~~~~~~v--~~dl~~~~-~ 77 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-----RKAGQSMESV---------FPHLRAQK--LPTLVSVK-D 77 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-----TTTTSCHHHH---------CGGGTTSC--CCCCBCGG-G
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-----hhcCCCHHHh---------CchhcCcc--cccceecc-h
Confidence 447999999 9999999999998865 588999886 3445443321 11111100 00111112 3
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (588)
++|. +||++|-|+ ..-.+.+.|..+ +.++++|-=++..
T Consensus 78 ~~~~-~vDvVf~at-p~~~s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 78 ADFS-TVDAVFCCL-PHGTTQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp CCGG-GCSEEEECC-CTTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred hHhc-CCCEEEEcC-CchhHHHHHHHH-hCCCEEEECCccc
Confidence 4564 899999876 455678888888 8899988777654
No 213
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.17 E-value=0.15 Score=51.89 Aligned_cols=114 Identities=11% Similarity=0.013 Sum_probs=65.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCH-HHHHHHHHHhhccCChhhhhhccCCceEe-CCCC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDY-MKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDi-e~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~e 493 (588)
++|.|.|+|++|..+|..|.+.| ..| .+.|. +++-.+. +++ +.... .. +. .- +..+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V-~~~dr-----~~~~~~~~~~~--~~~~~-~~-----------g~-~~~s~~e 83 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARL-AAYDL-----RFNDPAASGAL--RARAA-EL-----------GV-EPLDDVA 83 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEE-EEECG-----GGGCTTTHHHH--HHHHH-HT-----------TC-EEESSGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeE-EEEeC-----CCccccchHHH--HHHHH-HC-----------CC-CCCCHHH
Confidence 68999999999999999999999 874 56666 3321211 111 11111 11 22 11 2222
Q ss_pred ccccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCC-CC-CHHHHHHHHHCCceEecc
Q 007820 494 PWNERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNM-PC-TPEAVDVLKKANVLIAPA 553 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~-P~-T~eA~~iL~~rGI~viPD 553 (588)
. -.+|||+|-|-....... .+..+.. ..-++|+.-++. |. +.+..+.+.++|+.++..
T Consensus 84 ~-~~~aDvVi~avp~~~~~~-~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~ 145 (317)
T 4ezb_A 84 G-IACADVVLSLVVGAATKA-VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEG 145 (317)
T ss_dssp G-GGGCSEEEECCCGGGHHH-HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEE
T ss_pred H-HhcCCEEEEecCCHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence 2 247999999877665433 2344432 122456655554 43 344557788899887643
No 214
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.14 E-value=0.22 Score=51.40 Aligned_cols=115 Identities=15% Similarity=0.119 Sum_probs=70.4
Q ss_pred CCCC--cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 413 ELKG--LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 413 ~l~G--krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+++| +||+|.|.|.||+.+|+.|.+. .. |.+.|. +.+++. ..++. .. ...++
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~~-~~-v~~~~~----------~~~~~~---~~~~~---~~--------~~~~d 64 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-FD-VYIGDV----------NNENLE---KVKEF---AT--------PLKVD 64 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-SE-EEEEES----------CHHHHH---HHTTT---SE--------EEECC
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhcC-CC-eEEEEc----------CHHHHH---HHhcc---CC--------cEEEe
Confidence 4455 5899999999999999999764 55 456654 334432 11111 00 00111
Q ss_pred CC---Ccc--ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccc
Q 007820 491 EA---KPW--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAM 554 (588)
Q Consensus 491 ~~---eil--~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~ 554 (588)
-. .+- -.++||+|-|+... .+..-++..++.++.+|==.-..+.+.+-++..+++|+.++|+.
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~ 132 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDA 132 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCC
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecC
Confidence 11 111 24889999887654 67777777788899887533233444555677889999999865
No 215
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=94.13 E-value=0.17 Score=51.20 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=69.3
Q ss_pred CcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 416 GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
..||+|+|+ |+.|+..++.|.+.|.++|+..|.+.. |- + +. +...++. ++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~-----g~---~-------------~~-------G~~vy~sl~e 58 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG-----GT---T-------------HL-------GLPVFNTVRE 58 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC---E-------------ET-------TEEEESSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcc-----cc---e-------------eC-------CeeccCCHHH
Confidence 468999998 999999999999999998877765310 10 0 00 1111111 11
Q ss_pred cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCH---HHHHHHHHCCceEe-ccc
Q 007820 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTP---EAVDVLKKANVLIA-PAM 554 (588)
Q Consensus 494 il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~---eA~~iL~~rGI~vi-PD~ 554 (588)
+. ..++|+++-|... ....+.+...++.+++++++.+-+.... +..+..+++|+.++ |..
T Consensus 59 l~~~~~~D~viI~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc 123 (288)
T 2nu8_A 59 AVAATGATASVIYVPA-PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNT 123 (288)
T ss_dssp HHHHHCCCEEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred HhhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 22 1267888877654 3556777777788999877755443222 34566678899655 543
No 216
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.13 E-value=0.2 Score=48.53 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=58.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ei 494 (588)
++|.|.|.|++|..+|..|.+.| .. |.+.|. +.+++..+.+ . | +.... +..+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~-v~~~~r----------~~~~~~~~~~---~------~-----g~~~~~~~~~~ 55 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYR-IYIANR----------GAEKRERLEK---E------L-----GVETSATLPEL 55 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCE-EEEECS----------SHHHHHHHHH---H------T-----CCEEESSCCCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCe-EEEECC----------CHHHHHHHHH---h------c-----CCEEeCCHHHH
Confidence 47999999999999999999999 77 456665 2334322221 1 1 22222 22344
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCC
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKAN 547 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rG 547 (588)
. +||++|-|.... ...+-...+.. +-++|+.-+|+-...+..+.+ .++
T Consensus 56 ~--~~D~vi~~v~~~-~~~~v~~~l~~-~~~ivv~~~~g~~~~~l~~~~-~~~ 103 (263)
T 1yqg_A 56 H--SDDVLILAVKPQ-DMEAACKNIRT-NGALVLSVAAGLSVGTLSRYL-GGT 103 (263)
T ss_dssp C--TTSEEEECSCHH-HHHHHHTTCCC-TTCEEEECCTTCCHHHHHHHT-TSC
T ss_pred h--cCCEEEEEeCch-hHHHHHHHhcc-CCCEEEEecCCCCHHHHHHHc-CCC
Confidence 4 899999998733 22333333321 245777766654323333434 335
No 217
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.12 E-value=0.14 Score=50.11 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=62.5
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
++|.|.|+|++|..+|..|.+ |..| .+.|. ++ +++..+.+ . | ....+..+.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V-~~~~~-----~~-----~~~~~~~~---~-g-----------~~~~~~~~~~- 53 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPT-LVWNR-----TF-----EKALRHQE---E-F-----------GSEAVPLERV- 53 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCE-EEECS-----ST-----HHHHHHHH---H-H-----------CCEECCGGGG-
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeE-EEEeC-----CH-----HHHHHHHH---C-C-----------CcccCHHHHH-
Confidence 479999999999999999999 9985 56665 22 23222221 1 1 1111112222
Q ss_pred cccceeecCCCcCccchhhHHhhh---hcCCeEEEecCCCC-CC-HHHHHHHHHCCceEecc
Q 007820 497 ERCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMP-CT-PEAVDVLKKANVLIAPA 553 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA~~l~---~~~akiVvEgAN~P-~T-~eA~~iL~~rGI~viPD 553 (588)
.+||++|-|.....-..+-...+. ..+ ++|+.-.|.. .+ .+..+.+.++|+.+++.
T Consensus 54 ~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~-~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~ 114 (289)
T 2cvz_A 54 AEARVIFTCLPTTREVYEVAEALYPYLREG-TYWVDATSGEPEASRRLAERLREKGVTYLDA 114 (289)
T ss_dssp GGCSEEEECCSSHHHHHHHHHHHTTTCCTT-EEEEECSCCCHHHHHHHHHHHHTTTEEEEEC
T ss_pred hCCCEEEEeCCChHHHHHHHHHHHhhCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 389999999876542222233332 223 4566556653 33 33456677778887753
No 218
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.11 E-value=0.12 Score=52.43 Aligned_cols=117 Identities=16% Similarity=0.280 Sum_probs=70.1
Q ss_pred CcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CC
Q 007820 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AK 493 (588)
Q Consensus 416 GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~e 493 (588)
.+||+|+|+ |+.|+.+++.|.+.|.++|+..+.+.. |= + +. +...++. ++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~-----g~---~-------------i~-------G~~vy~sl~e 58 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKG-----GM---E-------------VL-------GVPVYDTVKE 58 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT-----TC---E-------------ET-------TEEEESSHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCC-----Cc---e-------------EC-------CEEeeCCHHH
Confidence 478999998 999999999999999997766655320 00 0 00 1111110 11
Q ss_pred cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecC-CCCCCH--HHHHHHHHCCceEeccccccccCceee
Q 007820 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS-NMPCTP--EAVDVLKKANVLIAPAMAAGAGGVVAG 564 (588)
Q Consensus 494 il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgA-N~P~T~--eA~~iL~~rGI~viPD~laNAGGVivS 564 (588)
+. ..++|+++-|... ....+.+...++.+++.|+..+ ..+.+. +..+..++.|+.++ --|+-|++..
T Consensus 59 l~~~~~~Dv~Ii~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi---gPNc~Gii~~ 129 (288)
T 1oi7_A 59 AVAHHEVDASIIFVPA-PAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI---GGNCPGIISA 129 (288)
T ss_dssp HHHHSCCSEEEECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE---ESSSCEEEET
T ss_pred HhhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE---eCCCCeEEcC
Confidence 11 1267888766543 3456667777778999555544 334322 45577788899665 2355566553
No 219
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=94.08 E-value=0.11 Score=52.37 Aligned_cols=79 Identities=13% Similarity=0.225 Sum_probs=56.3
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCCc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKP 494 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~ei 494 (588)
-+||+|.|+||||+.+++. . +..+++|.| +..| .+ +.... +-+++
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~------~k~g-----------------el--------gv~a~~d~d~l 57 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD------RISK-----------------DI--------PGVVRLDEFQV 57 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC------SSCC-----------------CC--------SSSEECSSCCC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe------cccc-----------------cc--------CceeeCCHHHH
Confidence 4799999999999999998 4 899999887 2221 01 11112 23566
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEec
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEG 530 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEg 530 (588)
+. ++|+++.||....+.+ .+.++++.|+.+|+-.
T Consensus 58 la-~pD~VVe~A~~~av~e-~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 58 PS-DVSTVVECASPEAVKE-YSLQILKNPVNYIIIS 91 (253)
T ss_dssp CT-TCCEEEECSCHHHHHH-HHHHHTTSSSEEEECC
T ss_pred hh-CCCEEEECCCHHHHHH-HHHHHHHCCCCEEEcC
Confidence 66 9999999998775543 3667777888888754
No 220
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.99 E-value=0.068 Score=51.29 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=54.7
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCccc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWN 496 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil~ 496 (588)
++|+|.|.|++|..+|+.|.+.|..|+.+.|. +++ ++..+.+ ..+ + .. ..+..+. -
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r-----~~~-----~~~~l~~---~~g-~--------~~-~~~~~~~-~ 79 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSR-----GPA-----SLSSVTD---RFG-A--------SV-KAVELKD-A 79 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTT-----CGG-----GGHHHHH---HHT-T--------TE-EECCHHH-H
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC-----CHH-----HHHHHHH---HhC-C--------Cc-ccChHHH-H
Confidence 68999999999999999999999997766776 332 2211221 111 0 00 0111111 2
Q ss_pred cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCC
Q 007820 497 ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP 534 (588)
Q Consensus 497 ~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P 534 (588)
.++|++|-|.....+ .+.+..|....-++|+..+|+-
T Consensus 80 ~~aDvVilavp~~~~-~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 80 LQADVVILAVPYDSI-ADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp TTSSEEEEESCGGGH-HHHHTTCSCCTTCEEEECCCCB
T ss_pred hcCCEEEEeCChHHH-HHHHHHhhccCCCEEEEcCCCC
Confidence 478999988764332 2333333112345888888864
No 221
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.93 E-value=0.19 Score=52.15 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=61.3
Q ss_pred cEEEEec-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCc
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKP 494 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ei 494 (588)
+||+|.| +|.||+.+++.|.+.. ..++++.+. ...|...... .+.+... ......+.++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~-----~~~g~~~~~~---------~~~~~g~----~~~~~~~~~~- 65 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR-----RFAGEPVHFV---------HPNLRGR----TNLKFVPPEK- 65 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS-----TTTTSBGGGT---------CGGGTTT----CCCBCBCGGG-
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc-----hhhCchhHHh---------CchhcCc----ccccccchhH-
Confidence 6899999 8999999999998765 488888875 2233322210 1111110 0011111112
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (588)
| .+||+++-|+ ....+.+.+..+.+.++++|-=++..
T Consensus 66 ~-~~vDvV~~a~-g~~~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 66 L-EPADILVLAL-PHGVFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp C-CCCSEEEECC-CTTHHHHTHHHHHTTCSEEEECSSTT
T ss_pred h-cCCCEEEEcC-CcHHHHHHHHHHHHCCCEEEEcCccc
Confidence 5 5899999886 45567888888888899988766643
No 222
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.76 E-value=0.11 Score=55.99 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=67.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~eil 495 (588)
++|.|.|+|++|..+|..|.+.|..| .+.|. +.+++..+.+ ..+. ++....+ .+++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V-~v~dr----------~~~~~~~l~~---~~~~--------~gi~~~~s~~e~v 63 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTV-AIYNR----------TTSKTEEVFK---EHQD--------KNLVFTKTLEEFV 63 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHH---HTTT--------SCEEECSSHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEE-EEEcC----------CHHHHHHHHH---hCcC--------CCeEEeCCHHHHH
Confidence 68999999999999999999999984 56655 3344332322 1100 1222111 11222
Q ss_pred c--cccceeecCCCcCccchhhHHhhhh-c-CCeEEEecCCCC--CCHHHHHHHHHCCceEec
Q 007820 496 N--ERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~--~dcDILIPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P--~T~eA~~iL~~rGI~viP 552 (588)
. .+||++|-|........+....|.. . .-++|+..+|.. .+.+..+.+.++|+.++.
T Consensus 64 ~~l~~aDvVilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~ 126 (474)
T 2iz1_A 64 GSLEKPRRIMLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG 126 (474)
T ss_dssp HTBCSSCEEEECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE
T ss_pred hhccCCCEEEEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC
Confidence 2 1599999988775433333333321 1 225788888875 334455667778988874
No 223
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.70 E-value=0.16 Score=50.16 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=63.2
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|+|.|+|++|..++..|.+.|..| .+.|. +.+++..+.+ . +....+. ++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~~----------~~~~~~~~~~---~------------g~~~~~~~~~~~ 59 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL-VVSDR----------NPEAIADVIA---A------------GAETASTAKAIA 59 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHHH---T------------TCEECSSHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHHHH---C------------CCeecCCHHHHH
Confidence 58999999999999999999999985 56665 2333322221 1 1111111 1112
Q ss_pred ccccceeecCCCcCccchhh------HHhhhhcCCeEEEecCCCCC--CHHHHHHHHHCCceEec
Q 007820 496 NERCDVAFPCASQNEIDQSD------AINLVNSGCRILVEGSNMPC--TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~en------A~~l~~~~akiVvEgAN~P~--T~eA~~iL~~rGI~viP 552 (588)
.+||++|-|.....-..+- ....+..+ ++|+.-+|+.. +.+..+.+.++|+.++.
T Consensus 60 -~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~-~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 60 -EQCDVIITMLPNSPHVKEVALGENGIIEGAKPG-TVLIDMSSIAPLASREISDALKAKGVEMLD 122 (299)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred -hCCCEEEEECCCHHHHHHHHhCcchHhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3799999988643221111 11222234 46677777753 23445677778887763
No 224
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.66 E-value=0.29 Score=49.33 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=62.5
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccC-Chhhh-hhccCCc-eEeCC-C
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQR-SLRDY-SKTYARS-KYYDE-A 492 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~g-sL~~y-~~~~p~a-~~i~~-~ 492 (588)
++|+|.|.|++|..+|..|.+.|..| .+.|. +.+.+..+.+ ..+ .+.+. ....... ...+. +
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V-~~~~r----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSV-LAWDI----------DAQRIKEIQD---RGAIIAEGPGLAGTAHPDLLTSDIG 70 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHHH---HTSEEEESSSCCEEECCSEEESCHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEE-EEEeC----------CHHHHHHHHh---cCCeEEeccccccccccceecCCHH
Confidence 68999999999999999999999985 45565 2233322222 111 01000 0000000 11111 1
Q ss_pred CccccccceeecCCCcCccchhhHHhh---hhcCCeEEEecCC-CCCCHHHHHHHHHCC
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINL---VNSGCRILVEGSN-MPCTPEAVDVLKKAN 547 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l---~~~~akiVvEgAN-~P~T~eA~~iL~~rG 547 (588)
+. -.+||++|-|...... .+-+..+ ++.++.+|.. .| .+.+.+..+.|.+.|
T Consensus 71 ~~-~~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~~~ 126 (359)
T 1bg6_A 71 LA-VKDADVILIVVPAIHH-ASIAANIASYISEGQLIILN-PGATGGALEFRKILRENG 126 (359)
T ss_dssp HH-HTTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHHTT
T ss_pred HH-HhcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHhcC
Confidence 11 1379999998877654 4444444 2345666666 44 444455456677765
No 225
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.63 E-value=0.21 Score=53.97 Aligned_cols=118 Identities=15% Similarity=0.080 Sum_probs=68.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|.|.|.|++|..+|..|.+.|..| .+.|. +.+++..+.+ ..+.... ..+....++ +++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V-~v~dr----------~~~~~~~l~~---~~g~~~~----~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKV-AVFNR----------TYSKSEEFMK---ANASAPF----AGNLKAFETMEAFA 63 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEECS----------SHHHHHHHHH---HTTTSTT----GGGEEECSCHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEE-EEEeC----------CHHHHHHHHH---hcCCCCC----CCCeEEECCHHHHH
Confidence 47999999999999999999999984 56665 3344433332 1110000 001111111 1222
Q ss_pred cc--ccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCC--CCHHHHHHHHHCCceEec
Q 007820 496 NE--RCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP--CTPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~~--dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P--~T~eA~~iL~~rGI~viP 552 (588)
.. ++|++|-|.....-..+.+..|.. ..-++|+..+|+. .+.+..+.+.++|+.++.
T Consensus 64 ~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~ 126 (478)
T 1pgj_A 64 ASLKKPRKALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG 126 (478)
T ss_dssp HHBCSSCEEEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred hcccCCCEEEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 22 599999888765333333333321 1235888899985 334455777788988764
No 226
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.47 E-value=0.13 Score=51.27 Aligned_cols=50 Identities=24% Similarity=0.233 Sum_probs=40.4
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 395 TGYGLVFFAQLILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 395 TG~GV~~~i~~~l~~~g~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|.+..++..+ +.+++|++++|.| .|-+|+++++.|.+.|++ |.+.+.
T Consensus 101 d~~g~~~~l~~~~---~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 101 TAAAGVALVVKAA---GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp HHHHHHHHHHHHT---TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred hHHHHHHHHHHhh---ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 4667666655321 6678999999999 999999999999999999 667766
No 227
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.39 E-value=0.45 Score=45.01 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=26.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|+|.+|+.+|+.|.+.|..|+. .|.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~v-id~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVI-INK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEE-EES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEE-EEC
Confidence 4799999999999999999999999664 454
No 228
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.36 E-value=0.15 Score=55.49 Aligned_cols=116 Identities=10% Similarity=0.042 Sum_probs=68.7
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCCc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKP 494 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~ei 494 (588)
..+|.|.|.|++|..+|..|.+.|..| .+.|. + .+++..+.+- ..+ + .++...+ .+++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V-~v~dr-----~-----~~~~~~l~~~--~~~---~-----~gi~~~~s~~e~ 68 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTV-CAYNR-----T-----QSKVDHFLAN--EAK---G-----KSIIGATSIEDF 68 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCE-EEECS-----S-----SHHHHHHHHT--TTT---T-----SSEECCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEE-EEEeC-----C-----HHHHHHHHcc--ccc---C-----CCeEEeCCHHHH
Confidence 358999999999999999999999985 56665 2 2333222220 100 0 0111111 1112
Q ss_pred cc--cccceeecCCCcCccchhhHHhhhhc--CCeEEEecCCCCC--CHHHHHHHHHCCceEec
Q 007820 495 WN--ERCDVAFPCASQNEIDQSDAINLVNS--GCRILVEGSNMPC--TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 495 l~--~dcDILIPcA~~n~It~enA~~l~~~--~akiVvEgAN~P~--T~eA~~iL~~rGI~viP 552 (588)
.. .+||++|-|-.......+.+..|... .-.+|+..+|... |.+..+.|.++|+.++.
T Consensus 69 v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~ 132 (497)
T 2p4q_A 69 ISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVG 132 (497)
T ss_dssp HHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeC
Confidence 21 14899998887754334444444321 2368888889853 34455778888998773
No 229
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.31 E-value=0.064 Score=54.47 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=31.6
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|.|.|.||...++.|.+.|++|+-|+
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEc
Confidence 37899999999999999999999999999976554
No 230
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=93.29 E-value=0.072 Score=53.52 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=67.3
Q ss_pred CCcEEEEeccchHHHHHHHHHHH----CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIA----YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e----~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+-.||+|+|+|++|..-++.|.+ .+.++++|+|.+- .. . .+ +..+.+
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a-------------~------~~-----g~~~~~ 56 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LG-------------S------LD-----EVRQIS 56 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CC-------------E------ET-----TEEBCC
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HH-------------H------Hc-----CCCCCC
Confidence 34699999999999987777754 4789999998731 00 0 00 111111
Q ss_pred CCCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCC--C-HHHH---HHHHHCCceEe
Q 007820 491 EAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPC--T-PEAV---DVLKKANVLIA 551 (588)
Q Consensus 491 ~~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~--T-~eA~---~iL~~rGI~vi 551 (588)
-++++ +.++|+++-|+. +..+.+.+...++.|..+++|= |+ | .++. +..+++|+.+.
T Consensus 57 ~~ell~~~~vD~V~i~tp-~~~H~~~~~~al~aGkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~ 120 (294)
T 1lc0_A 57 LEDALRSQEIDVAYICSE-SSSHEDYIRQFLQAGKHVLVEY---PMTLSFAAAQELWELAAQKGRVLH 120 (294)
T ss_dssp HHHHHHCSSEEEEEECSC-GGGHHHHHHHHHHTTCEEEEES---CSCSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHhcCCCCCEEEEeCC-cHhHHHHHHHHHHCCCcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEE
Confidence 22344 247899988875 5678888888888899999983 53 3 3344 33356776544
No 231
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.15 E-value=0.17 Score=49.18 Aligned_cols=102 Identities=10% Similarity=0.095 Sum_probs=59.3
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|.|.|+|++|...++.|.+.|.. |.+.|. +.+++..+.+ . + +....++ ++.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~-v~~~~~----------~~~~~~~~~~---~------~-----g~~~~~~~~~~~ 58 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHE-LIISGS----------SLERSKEIAE---Q------L-----ALPYAMSHQDLI 58 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCE-EEEECS----------SHHHHHHHHH---H------H-----TCCBCSSHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCe-EEEECC----------CHHHHHHHHH---H------c-----CCEeeCCHHHHH
Confidence 5899999999999999999999975 567765 2333322221 1 0 1111111 1122
Q ss_pred ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCc
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANV 548 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI 548 (588)
.+||++|-|.... ...+-+..+ +.+ ++|++-.++-...+..+.+ .++.
T Consensus 59 -~~~D~Vi~~v~~~-~~~~v~~~l-~~~-~~vv~~~~~~~~~~l~~~~-~~~~ 106 (259)
T 2ahr_A 59 -DQVDLVILGIKPQ-LFETVLKPL-HFK-QPIISMAAGISLQRLATFV-GQDL 106 (259)
T ss_dssp -HTCSEEEECSCGG-GHHHHHTTS-CCC-SCEEECCTTCCHHHHHHHH-CTTS
T ss_pred -hcCCEEEEEeCcH-hHHHHHHHh-ccC-CEEEEeCCCCCHHHHHHhc-CCCC
Confidence 3799999998733 334444444 223 4888877654433444444 4453
No 232
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.14 E-value=0.28 Score=51.70 Aligned_cols=120 Identities=13% Similarity=0.060 Sum_probs=69.7
Q ss_pred cEEEEeccchHHHHHHHHHHHCCC--eEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe--CCC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY--DEA 492 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GA--KVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i--~~~ 492 (588)
++|+|.|.|.+|+.+++.|.+.|. ..|+++|+ +.+++..+.+.....+. +....+ +-.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r----------~~~~~~~la~~l~~~~~--------~~~~~~~~D~~ 63 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR----------TLSKCQEIAQSIKAKGY--------GEIDITTVDAD 63 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES----------CHHHHHHHHHHHHHTTC--------CCCEEEECCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC----------CHHHHHHHHHHhhhhcC--------CceEEEEecCC
Confidence 489999999999999999999984 24677776 33443333321111000 011111 111
Q ss_pred ------Ccc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC--CCC--------HHHHHHHHHCCceEecccc
Q 007820 493 ------KPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM--PCT--------PEAVDVLKKANVLIAPAMA 555 (588)
Q Consensus 493 ------eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~--P~T--------~eA~~iL~~rGI~viPD~l 555 (588)
+++ ..++|++|-||... .+...+...++.++.+|- -++. |.. .+..+..+++|+.+++..-
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G 141 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALPY-QDLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSG 141 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCB
T ss_pred CHHHHHHHHHhhCCCEEEECCCcc-cChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCC
Confidence 112 12589999998653 244555555567888774 3332 211 1445677888998877654
Q ss_pred c
Q 007820 556 A 556 (588)
Q Consensus 556 a 556 (588)
.
T Consensus 142 ~ 142 (405)
T 4ina_A 142 F 142 (405)
T ss_dssp T
T ss_pred C
Confidence 3
No 233
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.10 E-value=0.19 Score=54.34 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=67.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~eil 495 (588)
++|.|.|.|++|+.+|..|.+.|..| .+.|. + .+++..+.+.. ..+ .+....+ .+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V-~v~dr-----~-----~~~~~~l~~~~-~~g---------~gi~~~~~~~e~v 61 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVV-CAFNR-----T-----VSKVDDFLANE-AKG---------TKVLGAHSLEEMV 61 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE-EEECS-----S-----THHHHHHHHTT-TTT---------SSCEECSSHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeE-EEEeC-----C-----HHHHHHHHhcc-ccC---------CCeEEeCCHHHHH
Confidence 57999999999999999999999984 56665 2 23332222200 000 0122111 12222
Q ss_pred c--cccceeecCCCcCccchhhHHhhhh-c-CCeEEEecCCCCC--CHHHHHHHHHCCceEec
Q 007820 496 N--ERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPC--TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~--~dcDILIPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~--T~eA~~iL~~rGI~viP 552 (588)
. .+||++|-|.....-..+.+..|.. . .-++|+..+|... +.+..+.|.++|+.++.
T Consensus 62 ~~l~~aDvVilaVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~ 124 (482)
T 2pgd_A 62 SKLKKPRRIILLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVG 124 (482)
T ss_dssp HHBCSSCEEEECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhccCCCEEEEeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeC
Confidence 2 3799999887765333333333321 1 2358888988863 34455778888988773
No 234
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.05 E-value=0.26 Score=52.38 Aligned_cols=107 Identities=18% Similarity=0.246 Sum_probs=64.9
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
+.+|+|.|+|.+|+.+|+.|.+.|..|+ |.|. |.+.+..+. .. | +.-+ +.++ +..++|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vv-vId~----------d~~~v~~~~---~~-g-~~vi---~GDa---t~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMV-VLDH----------DPDHIETLR---KF-G-MKVF---YGDA---TRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEE-EEEC----------CHHHHHHHH---HT-T-CCCE---ESCT---TCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEE-EEEC----------CHHHHHHHH---hC-C-CeEE---EcCC---CCHHHH
Confidence 4579999999999999999999999865 4565 344432222 11 1 0000 0011 111223
Q ss_pred ----ccccceeecCCCcCccchh---hHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce
Q 007820 496 ----NERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL 549 (588)
Q Consensus 496 ----~~dcDILIPcA~~n~It~e---nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~ 549 (588)
-.+||++|-|.-....+.. .|..+ ....+||+-..| ++....|.+.|+-
T Consensus 62 ~~agi~~A~~viv~~~~~~~n~~i~~~ar~~-~p~~~Iiara~~----~~~~~~L~~~Gad 117 (413)
T 3l9w_A 62 ESAGAAKAEVLINAIDDPQTNLQLTEMVKEH-FPHLQIIARARD----VDHYIRLRQAGVE 117 (413)
T ss_dssp HHTTTTTCSEEEECCSSHHHHHHHHHHHHHH-CTTCEEEEEESS----HHHHHHHHHTTCS
T ss_pred HhcCCCccCEEEECCCChHHHHHHHHHHHHh-CCCCeEEEEECC----HHHHHHHHHCCCC
Confidence 1378999888766544433 33333 235688887654 5677889999974
No 235
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.90 E-value=0.96 Score=46.00 Aligned_cols=35 Identities=17% Similarity=0.072 Sum_probs=29.0
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCC--eEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GA--KVVaVSDs 448 (588)
.+.-++|.|+|+|++|..+|+.|.+.|. .| .+.|.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V-~~~dr 66 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYDI 66 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEE-EEECS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEE-EEEEC
Confidence 3445799999999999999999999998 64 45565
No 236
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=92.87 E-value=0.41 Score=49.47 Aligned_cols=52 Identities=29% Similarity=0.375 Sum_probs=43.3
Q ss_pred CCccHHHHHHHHHHHHHHhCCCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADMNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~g~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
...|-+|++ ++|++.+.+++||+++|.| +.-||.-+|.+|.+.+|. |+++.+
T Consensus 159 ~PcTp~gv~----~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~AT-VTi~Hs 211 (303)
T 4b4u_A 159 GSATPAGIM----TILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANAT-VTICHS 211 (303)
T ss_dssp CCHHHHHHH----HHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE-EEEECT
T ss_pred cCccHHHHH----HHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCE-EEEecC
Confidence 457887765 4566779999999999999 566899999999999999 577766
No 237
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=92.86 E-value=0.19 Score=54.35 Aligned_cols=111 Identities=10% Similarity=0.022 Sum_probs=71.2
Q ss_pred CcEEEEecc----chHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 416 GLRCVVSGS----GKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 416 GkrVaIQGf----GNVG~~aAe~L~e~--GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
-.||+|+|+ |.+|...++.|.+. +++|++|+|. +.+++..+.+ ..+ .+.....
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~----------~~~~a~~~a~---~~g--------~~~~~~~ 97 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP----------TLKSSLQTIE---QLQ--------LKHATGF 97 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS----------CHHHHHHHHH---HTT--------CTTCEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC----------CHHHHHHHHH---HcC--------CCcceee
Confidence 469999999 99999888888875 7899999997 3333321211 111 0111222
Q ss_pred CC-CCccc-cccceeecCCCcCccchhhHHhhhhcC------CeEEEecCCCCC--C-HHHH---HHHHHCC-ceEe
Q 007820 490 DE-AKPWN-ERCDVAFPCASQNEIDQSDAINLVNSG------CRILVEGSNMPC--T-PEAV---DVLKKAN-VLIA 551 (588)
Q Consensus 490 ~~-~eil~-~dcDILIPcA~~n~It~enA~~l~~~~------akiVvEgAN~P~--T-~eA~---~iL~~rG-I~vi 551 (588)
++ ++++. .++|+++-|+. +..+.+.+...++.+ ..++||= |+ | .++. +..+++| +.+.
T Consensus 98 ~d~~ell~~~~vD~V~I~tp-~~~H~~~~~~al~aG~~~~~~khVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~~ 170 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVK-VPEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTI 170 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSC-HHHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEE
T ss_pred CCHHHHhcCCCCCEEEEcCC-cHHHHHHHHHHHHCCCCcCCceeEEEeC---CCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 22 34553 57999998875 556777777777778 7799983 53 2 3343 3446778 6654
No 238
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.78 E-value=0.23 Score=50.80 Aligned_cols=51 Identities=22% Similarity=0.293 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhC-----CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 398 GLVFFAQLILADMN-----KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 398 GV~~~i~~~l~~~g-----~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
|+-|.=+-+|+.+| ..|+.++|+|.|.|-+|..+|+.|...|..-++|.|.
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~ 68 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDY 68 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECC
Confidence 44455445555554 2578899999999999999999999999876777775
No 239
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=92.75 E-value=0.07 Score=56.72 Aligned_cols=114 Identities=8% Similarity=-0.017 Sum_probs=72.4
Q ss_pred CCcEEEEecc----chHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 415 KGLRCVVSGS----GKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 415 ~GkrVaIQGf----GNVG~~aAe~L~e~--GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
+-.||+|+|+ |.+|...++.|.+. ++++|+|+|. +.+++..+.+ ..+ .+....
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~----------~~~~~~~~a~---~~g--------~~~~~~ 77 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP----------KIETSIATIQ---RLK--------LSNATA 77 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS----------SHHHHHHHHH---HTT--------CTTCEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC----------CHHHHHHHHH---HcC--------CCccee
Confidence 3469999999 99999888888876 7899999997 3333321221 111 011122
Q ss_pred eC-CCCccc-cccceeecCCCcCccchhhHHhhhhcC------CeEEEecCCCCC--C-HHHH---HHHHHCCceEecc
Q 007820 489 YD-EAKPWN-ERCDVAFPCASQNEIDQSDAINLVNSG------CRILVEGSNMPC--T-PEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 489 i~-~~eil~-~dcDILIPcA~~n~It~enA~~l~~~~------akiVvEgAN~P~--T-~eA~---~iL~~rGI~viPD 553 (588)
.+ -++++. .++|+++-|+. +..+.+.+...++.+ ..+++|= |+ | .++. +..+++|+.+...
T Consensus 78 ~~~~~~ll~~~~vD~V~i~tp-~~~H~~~~~~al~aG~~~~~~khVl~EK---P~a~~~~e~~~l~~~a~~~g~~~~v~ 152 (438)
T 3btv_A 78 FPTLESFASSSTIDMIVIAIQ-VASHYEVVMPLLEFSKNNPNLKYLFVEW---ALACSLDQAESIYKAAAERGVQTIIS 152 (438)
T ss_dssp ESSHHHHHHCSSCSEEEECSC-HHHHHHHHHHHHHHGGGCTTCCEEEEES---SCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred eCCHHHHhcCCCCCEEEEeCC-cHHHHHHHHHHHHCCCCcccceeEEecC---cccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 22 234553 57999998875 556677777777778 7899993 42 3 3333 4446778766543
No 240
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.68 E-value=0.083 Score=45.56 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=28.0
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++++|+|.|+|.+|+.+++.|.+.|..|+. .|.
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~-~d~ 37 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLA-VDI 37 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEE-EES
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 5678899999999999999999999998654 444
No 241
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.67 E-value=0.16 Score=53.13 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++.|++|+|.|+|.+|..+++.+..+|++ |.+.|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~~~d~ 203 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAV-VMATDV 203 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 67899999999999999999999999998 677776
No 242
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.66 E-value=0.12 Score=51.05 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=32.6
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~ 449 (588)
|++++|+|.|.|.+|..+|+.|...|..-++|.|.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467899999999999999999999999888898864
No 243
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=92.66 E-value=0.16 Score=52.88 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=70.8
Q ss_pred CCCcEEEEeccch---HHHHHHHHHHHCC-CeEEE-EEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 414 LKGLRCVVSGSGK---IAMHVLEKLIAYG-AIPVS-VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 414 l~GkrVaIQGfGN---VG~~aAe~L~e~G-AKVVa-VSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
++-.||+|+|+|. +|..-+..+...+ +.+|+ |+|. |.++...+.+ ..+ + |....
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~----------~~~~a~~~a~---~~g-~-------~~~~~ 68 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI----------DPIRGSAFGE---QLG-V-------DSERC 68 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS----------SHHHHHHHHH---HTT-C-------CGGGB
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC----------CHHHHHHHHH---HhC-C-------Cccee
Confidence 4557999999999 9987777776654 78887 7887 3334321211 111 1 10011
Q ss_pred eC-CCCccc------cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEec
Q 007820 489 YD-EAKPWN------ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAP 552 (588)
Q Consensus 489 i~-~~eil~------~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viP 552 (588)
.+ -++++. .++|+++-|+ .+..+.+.+...++.|..++||=-=.....++. +..+++|+.+.-
T Consensus 69 ~~~~~~ll~~~~~~~~~vD~V~i~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 141 (398)
T 3dty_A 69 YADYLSMFEQEARRADGIQAVSIAT-PNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGV 141 (398)
T ss_dssp CSSHHHHHHHHTTCTTCCSEEEEES-CGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCHHHHHhcccccCCCCCEEEECC-CcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 11 133443 3589998655 566788888888888999999842111223444 444677876654
No 244
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.44 E-value=0.25 Score=48.66 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=26.7
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|.|.|+|++|..+|+.|.+.|..| .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V-~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPL-IIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCE-EEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEE-EEEeC
Confidence 47999999999999999999999885 46665
No 245
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.44 E-value=0.2 Score=52.74 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=68.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCCh-----hhhhhccC-CceEeC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSL-----RDYSKTYA-RSKYYD 490 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL-----~~y~~~~p-~a~~i~ 490 (588)
++|+|.|.|.||..+|..|.+ |..|+ +.|. |.+++..+ .+....+ .++....+ .....+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~-~~d~----------~~~~~~~l---~~~~~~i~e~~l~~~~~~~~~~l~~t~ 65 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVT-IVDI----------LPSKVDKI---NNGLSPIQDEYIEYYLKSKQLSIKATL 65 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEE-EECS----------CHHHHHHH---HTTCCSSCCHHHHHHHHHSCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEE-EEEC----------CHHHHHHH---HcCCCCcCCCCHHHHHHhccCcEEEeC
Confidence 479999999999999999998 98854 4455 22332211 1111111 11110000 011111
Q ss_pred CCCccccccceeecCCCcCc----------cchhhHHhh--hhcCCeEEEecCCCCCCH-HHHHHHHHCCceEecccccc
Q 007820 491 EAKPWNERCDVAFPCASQNE----------IDQSDAINL--VNSGCRILVEGSNMPCTP-EAVDVLKKANVLIAPAMAAG 557 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~n~----------It~enA~~l--~~~~akiVvEgAN~P~T~-eA~~iL~~rGI~viPD~laN 557 (588)
...-.-.+||++|-|..... ...+-+..| +..++-+|.+..|.|-|. +..+.+.+..|.+.|.++ .
T Consensus 66 ~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~~~Pe~~-~ 144 (402)
T 1dlj_A 66 DSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTDRIIFSPEFL-R 144 (402)
T ss_dssp CHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCSCEEECCCCC-C
T ss_pred CHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCCeEEECCccc-c
Confidence 10001237899988876552 112222222 234666777799998654 444555556788888765 3
Q ss_pred ccC
Q 007820 558 AGG 560 (588)
Q Consensus 558 AGG 560 (588)
.|.
T Consensus 145 ~G~ 147 (402)
T 1dlj_A 145 ESK 147 (402)
T ss_dssp TTS
T ss_pred Ccc
Confidence 443
No 246
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=92.37 E-value=0.27 Score=51.74 Aligned_cols=118 Identities=13% Similarity=0.075 Sum_probs=70.4
Q ss_pred CCCcEEEEeccch---HHHHHHHHHHHCC-CeEEE-EEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 414 LKGLRCVVSGSGK---IAMHVLEKLIAYG-AIPVS-VSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 414 l~GkrVaIQGfGN---VG~~aAe~L~e~G-AKVVa-VSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
.+-.||+|+|+|+ +|..-+..+...+ +++|+ |+|. |.++...+.+ ..+ + |....
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~----------~~~~a~~~a~---~~g-~-------~~~~~ 93 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS----------TPEKAEASGR---ELG-L-------DPSRV 93 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS----------SHHHHHHHHH---HHT-C-------CGGGB
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC----------CHHHHHHHHH---HcC-C-------Ccccc
Confidence 4557999999999 9987777776665 78886 8887 3334322221 111 1 10011
Q ss_pred eC-CCCccc------cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 489 YD-EAKPWN------ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 489 i~-~~eil~------~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
.+ -++++. .++|+++-|+ .+..+.+.+...++.+..++||=-=.....++. +..+++|+.+.-.
T Consensus 94 ~~~~~~ll~~~~~~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~ 167 (417)
T 3v5n_A 94 YSDFKEMAIREAKLKNGIEAVAIVT-PNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLT 167 (417)
T ss_dssp CSCHHHHHHHHHHCTTCCSEEEECS-CTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCHHHHHhcccccCCCCcEEEECC-CcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 12 234553 3589998665 456788888888889999999941111223444 3346778765533
No 247
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.28 E-value=0.68 Score=46.96 Aligned_cols=112 Identities=19% Similarity=0.206 Sum_probs=66.1
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce-EeCCC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK-YYDEA 492 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~-~i~~~ 492 (588)
-.|.+|+|.|.|.||..+++++...|++|+++.-+ ++ +++.+++ .| +. .+...
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~------~~-----~~~~~~~----lG-----------a~~v~~~~ 228 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARN------EH-----KKQDALS----MG-----------VKHFYTDP 228 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSS------ST-----THHHHHH----TT-----------CSEEESSG
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCC------HH-----HHHHHHh----cC-----------CCeecCCH
Confidence 36899999999999999999999999997765432 32 2211221 11 11 11222
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC--CCC-HHHHHHHHHCCceEec
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM--PCT-PEAVDVLKKANVLIAP 552 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~--P~T-~eA~~iL~~rGI~viP 552 (588)
+.+...+|++|.|+.... +-+.+-++++.+.++|.=|.-. +.+ ......+..+++.+..
T Consensus 229 ~~~~~~~D~vid~~g~~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 290 (348)
T 3two_A 229 KQCKEELDFIISTIPTHY-DLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG 290 (348)
T ss_dssp GGCCSCEEEEEECCCSCC-CHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE
T ss_pred HHHhcCCCEEEECCCcHH-HHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE
Confidence 222338999999886542 3344555556677777655433 233 2333444366666653
No 248
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.15 E-value=0.14 Score=45.75 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=61.3
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC---
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE--- 491 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~--- 491 (588)
..++|+|.|+|.||+.+++.|.+.|..|+.|. . ++ .+.+..+..... . +...+.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid-~-----~~----~~~~~~~~~~~~-~-----------~~~~i~gd~~ 59 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVIS-N-----LP----EDDIKQLEQRLG-D-----------NADVIPGDSN 59 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEE-C-----CC----HHHHHHHHHHHC-T-----------TCEEEESCTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEE-C-----CC----hHHHHHHHHhhc-C-----------CCeEEEcCCC
Confidence 35689999999999999999999999976554 3 11 122211221110 0 1112211
Q ss_pred -CCcc----ccccceeecCCCcCccchh---hHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce
Q 007820 492 -AKPW----NERCDVAFPCASQNEIDQS---DAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL 549 (588)
Q Consensus 492 -~eil----~~dcDILIPcA~~n~It~e---nA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~ 549 (588)
.+.| -.++|++|-|......|.. .|..+ ....++|+.. |.| +..+.|++.|+-
T Consensus 60 ~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~-~~~~~ii~~~-~~~---~~~~~l~~~G~~ 120 (153)
T 1id1_A 60 DSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM-SSDVKTVLAV-SDS---KNLNKIKMVHPD 120 (153)
T ss_dssp SHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH-TSSSCEEEEC-SSG---GGHHHHHTTCCS
T ss_pred CHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH-CCCCEEEEEE-CCH---HHHHHHHHcCCC
Confidence 1122 1378999988766544433 33333 1245777754 444 335677888874
No 249
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=92.12 E-value=0.38 Score=50.77 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=65.7
Q ss_pred cEEEEeccchHHHHHHHHHHH----C-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhc---------
Q 007820 417 LRCVVSGSGKIAMHVLEKLIA----Y-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKT--------- 482 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e----~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~--------- 482 (588)
.||+|-|||-+|+.+.+.|.+ . ...||+|.|. -.|.+.+..|+++-...|++....+.
T Consensus 3 ~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~--------~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~ 74 (359)
T 3ids_C 3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDM--------NTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAK 74 (359)
T ss_dssp EEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECS--------SCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSS
T ss_pred eEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecC--------CCCHHHHHHHhcccCCCCCEeeEEEecccccccCC
Confidence 489999999999999998433 2 3678999984 24777776666654444433221110
Q ss_pred -----cCC--ceEe----CCCC-cc-ccccceeecCCCcCccchhhHHhhhhcCCe-EEE
Q 007820 483 -----YAR--SKYY----DEAK-PW-NERCDVAFPCASQNEIDQSDAINLVNSGCR-ILV 528 (588)
Q Consensus 483 -----~p~--a~~i----~~~e-il-~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVv 528 (588)
+.+ .+.. ++++ .| +..+||++.|+ +.-.+.+-|...++.||| +|+
T Consensus 75 ~~~l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesT-G~f~s~e~A~~hl~aGAkkViI 133 (359)
T 3ids_C 75 DDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIEST-GLFTAKAAAEGHLRGGARKVVI 133 (359)
T ss_dssp CCEEEETTEEEEECCCCSSTTTSCHHHHTCCEEEECS-SSCCBHHHHTHHHHTTCCEEEE
T ss_pred CCEEEECCEEEEEEEccCCcccCCccccCccEEEEec-cccCCHHHHHHHHHcCCCEEEE
Confidence 111 1111 1222 46 46899999997 455688888887788997 444
No 250
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.98 E-value=0.68 Score=47.39 Aligned_cols=33 Identities=36% Similarity=0.403 Sum_probs=29.9
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|.+|+|.|.|.||..++.++...|++|+++.
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~ 220 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 468999999999999999999999999987664
No 251
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.94 E-value=0.29 Score=48.92 Aligned_cols=108 Identities=15% Similarity=0.246 Sum_probs=61.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|+|.|+|++|..+|..|.+.|..| .+.|. +++ ++..+.+ . +....+. .+.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V-~~~~~-----~~~-----~~~~~~~----~-----------g~~~~~~~~~~~ 84 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTV-TVWNR-----TAE-----KCDLFIQ----E-----------GARLGRTPAEVV 84 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCE-EEECS-----SGG-----GGHHHHH----T-----------TCEECSCHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEE-EEEeC-----CHH-----HHHHHHH----c-----------CCEEcCCHHHHH
Confidence 68999999999999999999999885 56665 222 2211111 1 1111111 1111
Q ss_pred ccccceeecCCCcCccchhhHHhh------hhcCCeEEEecCCCCC--CHHHHHHHHHCCceEec
Q 007820 496 NERCDVAFPCASQNEIDQSDAINL------VNSGCRILVEGSNMPC--TPEAVDVLKKANVLIAP 552 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l------~~~~akiVvEgAN~P~--T~eA~~iL~~rGI~viP 552 (588)
.+||++|-|........+....+ +. .-++|+..+|... ..+..+.+.++|+.++.
T Consensus 85 -~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~-~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 85 -STCDITFACVSDPKAAKDLVLGPSGVLQGIR-PGKCYVDMSTVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp -HHCSEEEECCSSHHHHHHHHHSTTCGGGGCC-TTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -hcCCEEEEeCCCHHHHHHHHcCchhHhhcCC-CCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 37999999887433222222211 11 2356777777531 23334566677887764
No 252
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.89 E-value=0.23 Score=49.44 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=27.5
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V-~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAV-TAYDI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE-EEEeC
Confidence 58999999999999999999999985 45665
No 253
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=91.72 E-value=0.41 Score=49.65 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=59.9
Q ss_pred cEEEEec-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhcc-CChhhhhhccCCceEeCCCC
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQ-RSLRDYSKTYARSKYYDEAK 493 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~-gsL~~y~~~~p~a~~i~~~e 493 (588)
+||+|.| +|.+|+.+++.|.+.. ..|+++.++. ...|-..+.+ +.... ..+..-.... .....+.++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~----~~~g~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~ 78 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASE----RSAGKKYKDA-----CYWFQDRDIPENIKDM-VVIPTDPKH 78 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT----TTTTSBHHHH-----SCCCCSSCCCHHHHTC-BCEESCTTS
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc----ccccccHHHh-----cccccccccccCceee-EEEeCCHHH
Confidence 5899999 9999999999998764 6888887531 1123222111 00000 0000000000 011123333
Q ss_pred ccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
+...+||++|-|+. ...+.+.+..+.+.++++|--++-
T Consensus 79 ~~~~~~DvV~~atp-~~~~~~~a~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 79 EEFEDVDIVFSALP-SDLAKKFEPEFAKEGKLIFSNASA 116 (354)
T ss_dssp GGGTTCCEEEECCC-HHHHHHHHHHHHHTTCEEEECCST
T ss_pred HhcCCCCEEEECCC-chHHHHHHHHHHHCCCEEEECCch
Confidence 22348999999874 456777888888889997765543
No 254
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.52 E-value=0.68 Score=45.72 Aligned_cols=90 Identities=14% Similarity=0.071 Sum_probs=55.4
Q ss_pred cEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
++|.|.|+ |++|..+|+.|.+.|..|+ +.|. +.+.+..+.+ .| ....+..+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~-~~~r----------~~~~~~~~~~----~g-----------~~~~~~~~~- 64 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLA-AIEI----------APEGRDRLQG----MG-----------IPLTDGDGW- 64 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEE-EECC----------SHHHHHHHHH----TT-----------CCCCCSSGG-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EEEC----------CHHHHHHHHh----cC-----------CCcCCHHHH-
Confidence 58999999 9999999999999999854 6665 2333322221 11 111122222
Q ss_pred ccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCC
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP 534 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P 534 (588)
-.+||++|-|.....+ .+-...|.. ..-++|+..++..
T Consensus 65 ~~~aDvVi~av~~~~~-~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 65 IDEADVVVLALPDNII-EKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGTCSEEEECSCHHHH-HHHHHHHGGGSCTTCEEEESCSHH
T ss_pred hcCCCEEEEcCCchHH-HHHHHHHHHhCCCCCEEEECCCCc
Confidence 2489999999887663 444444422 1235777777764
No 255
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.42 E-value=0.66 Score=49.81 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=27.5
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~-~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVR-CIDT 33 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEE-EEEC
Confidence 689999999999999999999999865 5565
No 256
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=91.41 E-value=0.19 Score=49.38 Aligned_cols=107 Identities=10% Similarity=0.017 Sum_probs=61.1
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~eil 495 (588)
++|.|.|+|++|..+|+.|.+.|..|+ +.| + ++-+ +++ . +. + ....+ .++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~-~-----~~~~--~~~---~---~~-g-----------~~~~~~~~~~~ 56 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLH-VTT-I-----GPVA--DEL---L---SL-G-----------AVNVETARQVT 56 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEE-ECC-S-----SCCC--HHH---H---TT-T-----------CBCCSSHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEE-EEc-C-----HHHH--HHH---H---Hc-C-----------CcccCCHHHHH
Confidence 589999999999999999999999864 444 2 2211 111 1 11 1 11111 11112
Q ss_pred ccccceeecCCCcCccchhhHH---hhhh--cCCeEEEecCCCC-CC-HHHHHHHHHCCceEe
Q 007820 496 NERCDVAFPCASQNEIDQSDAI---NLVN--SGCRILVEGSNMP-CT-PEAVDVLKKANVLIA 551 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~---~l~~--~~akiVvEgAN~P-~T-~eA~~iL~~rGI~vi 551 (588)
.+||++|-|........+-.. .+.. ..-++|+.-+|+. .+ .+..+.+.++|+.++
T Consensus 57 -~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 57 -EFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp -HTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred -hcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 379999998865442222222 2211 1235677777774 32 344566777888876
No 257
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.39 E-value=0.6 Score=46.55 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=28.0
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCC---eEEEEEcC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGA---IPVSVSDA 448 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GA---KVVaVSDs 448 (588)
+.++|.|+|.|++|..+++.|.+.|. . |.++|.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~-V~v~dr 37 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNR-ICVTNR 37 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGG-EEEECS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCe-EEEEeC
Confidence 34789999999999999999999997 5 556665
No 258
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.30 E-value=0.2 Score=48.85 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=28.9
Q ss_pred hCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 410 MNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 410 ~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
...++.+++|.|.|+|++|..+|+.|.+.|..| .+.|.
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V-~~~~r 50 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEV-TIGTR 50 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEE-EEEeC
Confidence 345789999999999999999999999999985 45565
No 259
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.29 E-value=1.4 Score=42.95 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=52.7
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~eil 495 (588)
++|+|.|+|++|..+|+.|.+.|..|+ +.|. +.+.+..+.+ .+.. ....++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~-~~~~----------~~~~~~~~~~----~g~~---------~~~~~~~~~~- 55 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLI-GVSR----------QQSTCEKAVE----RQLV---------DEAGQDLSLL- 55 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS----------CHHHHHHHHH----TTSC---------SEEESCGGGG-
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEE-EEEC----------CHHHHHHHHh----CCCC---------ccccCCHHHh-
Confidence 479999999999999999999999854 4455 2333322211 1110 011111 223
Q ss_pred ccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCC
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP 534 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P 534 (588)
.+||++|-|.....+ .+-+..+.. ..-.+|+.-+|..
T Consensus 56 -~~~D~vi~av~~~~~-~~~~~~l~~~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 56 -QTAKIIFLCTPIQLI-LPTLEKLIPHLSPTAIVTDVASVK 94 (279)
T ss_dssp -TTCSEEEECSCHHHH-HHHHHHHGGGSCTTCEEEECCSCC
T ss_pred -CCCCEEEEECCHHHH-HHHHHHHHhhCCCCCEEEECCCCc
Confidence 589999999876533 333333322 1234666666643
No 260
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.23 E-value=0.43 Score=46.25 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=26.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCC----eEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGA----IPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GA----KVVaVSDs 448 (588)
++|.|.|.|++|..+++.|.+.|. . |.+.|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~-V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQ-IICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGG-EEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCe-EEEEeC
Confidence 589999999999999999999997 6 456665
No 261
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.10 E-value=0.22 Score=47.06 Aligned_cols=35 Identities=34% Similarity=0.559 Sum_probs=28.6
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|.|. |.+|+++++.|.+.|++|++++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~ 52 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMV 52 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEE
Confidence 3689999999996 9999999999999999987665
No 262
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=91.06 E-value=0.081 Score=51.90 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=68.2
Q ss_pred CCCHHHHHHH--HHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHH
Q 007820 321 GKSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYG 398 (588)
Q Consensus 321 ~~S~~El~R~--~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~G 398 (588)
..++.-+.|+ +-+|..+|.+- +---++.+|++-..+-....-. |.+++=|..|+. --||-
T Consensus 6 ~ip~~ti~RL~~Y~r~l~~l~~~---------g~~~isS~ela~~~gv~~~qiR--------kDls~fg~~G~~-g~GY~ 67 (212)
T 3keo_A 6 SIPKATAKRLSLYYRIFKRFNTD---------GIEKASSKQIADALGIDSATVR--------RDFSYFGELGRR-GFGYD 67 (212)
T ss_dssp CCCHHHHTTHHHHHHHHHHHHHT---------TCCEECHHHHHHHHTSCHHHHH--------HHHHTTGGGTTT-SSSEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHC---------CCeEECHHHHHHHHCCCHHHHH--------HHHHHHhhcCCC-CCCEE
Confidence 4567777775 56667766541 1112578888776643211100 112222233321 34677
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHHH--HHCCCeEEEEEcC
Q 007820 399 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKL--IAYGAIPVSVSDA 448 (588)
Q Consensus 399 V~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L--~e~GAKVVaVSDs 448 (588)
|-+...+.-+.+|.+ +..+|+|.|.||.|+.+++.+ .+.|.++|++.|.
T Consensus 68 V~~L~~~i~~~Lg~~-~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~ 118 (212)
T 3keo_A 68 VKKLMNFFAEILNDH-STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL 118 (212)
T ss_dssp HHHHHHHHHHHTTTT-SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC
Confidence 766666666667755 457999999999999999873 4578999999998
No 263
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.85 E-value=0.35 Score=51.21 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++.|++|+|.|+|.+|..+++.+..+|++ |.+.|.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~-V~v~D~ 203 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAI-VRAFDT 203 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcC
Confidence 36799999999999999999999999997 567776
No 264
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.82 E-value=1.7 Score=45.20 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=28.8
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCC-eEEEE
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaV 445 (588)
--.|.+|+|.|.|.||..++.++...|+ +|+++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 244 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILS 244 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 3468999999999999999999999999 76655
No 265
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.77 E-value=0.72 Score=46.82 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=30.8
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
--.|.+|+|.|. |.||..+++++...|++|+++..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~ 192 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN 192 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 346899999997 99999999999999999877654
No 266
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=90.57 E-value=0.9 Score=46.18 Aligned_cols=116 Identities=16% Similarity=0.260 Sum_probs=68.3
Q ss_pred CcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCC--CeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 416 GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~--G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
..+++|+|. |+.|+.+++.|.+.|.++|+..+.+ |.-. .|+ .- |+.. +
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i--~G~------------------~v----y~sl-----~ 63 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEV--HGV------------------PV----YDSV-----K 63 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE--TTE------------------EE----ESSH-----H
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceE--CCE------------------ee----eCCH-----H
Confidence 347888897 9999999999999999977665542 1100 111 00 1111 1
Q ss_pred Cccc-cc-cceeecCCCcCccchhhHHhhhhcCCeEEEec-CCCCCC--HHHHHHHHHCCceEeccccccccCceee
Q 007820 493 KPWN-ER-CDVAFPCASQNEIDQSDAINLVNSGCRILVEG-SNMPCT--PEAVDVLKKANVLIAPAMAAGAGGVVAG 564 (588)
Q Consensus 493 eil~-~d-cDILIPcA~~n~It~enA~~l~~~~akiVvEg-AN~P~T--~eA~~iL~~rGI~viPD~laNAGGVivS 564 (588)
++.. .+ +|+++-|... ....+.+...++.+++.|+-. ...+.+ .+..+..++.|+.++ --|+-|++..
T Consensus 64 el~~~~~~~DvaIi~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi---GPNc~Gii~~ 136 (297)
T 2yv2_A 64 EALAEHPEINTSIVFVPA-PFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII---GPNCPGAITP 136 (297)
T ss_dssp HHHHHCTTCCEEEECCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE---CSSSCEEEET
T ss_pred HHhhcCCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE---cCCCCeeEcc
Confidence 1222 13 7888866544 345666777777899944443 333322 244567778899665 2355566653
No 267
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.44 E-value=0.27 Score=51.40 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=30.9
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++.|++|+|.|+|.+|+.+|+.+...|++|+ +.|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~-~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVT-VLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEeC
Confidence 5789999999999999999999999999854 5555
No 268
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.30 E-value=0.43 Score=49.54 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=30.9
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++++++|+|.|.|.+|..+|+.|...|++|+ +.|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~-~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVT-ILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEEC
Confidence 4889999999999999999999999999854 5554
No 269
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.16 E-value=0.59 Score=48.62 Aligned_cols=35 Identities=31% Similarity=0.379 Sum_probs=31.9
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
|++++|+|.|.|-+|..+|+.|...|..-+.|.|.
T Consensus 116 L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 116 LKNAKVVILGCGGIGNHVSVILATSGIGEIILIDN 150 (353)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 56789999999999999999999999877888886
No 270
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=90.03 E-value=0.83 Score=47.92 Aligned_cols=106 Identities=13% Similarity=0.182 Sum_probs=64.9
Q ss_pred CcEEEEeccchHHHHHHHHHHHC--CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-C
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-A 492 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~--GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ 492 (588)
-.||+|.|.| .|+.-++.+.+. ++.+|+|+|+ ++ ++...+. ++| +...+++ +
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~-----~~-----~~a~~~a-------------~~~-gv~~~~~~~ 61 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ-----GS-----ARSRELA-------------HAF-GIPLYTSPE 61 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC-----SS-----HHHHHHH-------------HHT-TCCEESSGG
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC-----CH-----HHHHHHH-------------HHh-CCCEECCHH
Confidence 4699999999 688777766654 6899999998 32 2321111 112 2222222 3
Q ss_pred CccccccceeecCCCcCccc----hhhHHhhhhcCCeEEEecCCCCCCH-HHHHHH---HHCCceEe
Q 007820 493 KPWNERCDVAFPCASQNEID----QSDAINLVNSGCRILVEGSNMPCTP-EAVDVL---KKANVLIA 551 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It----~enA~~l~~~~akiVvEgAN~P~T~-eA~~iL---~~rGI~vi 551 (588)
++++ ++|+.+=|.. |..+ .+-|...++.|..++||= |+|. ||.+++ +++|+.+.
T Consensus 62 ~l~~-~~D~v~i~~p-~~~h~~~~~~~a~~al~aGkhVl~EK---Pl~~~ea~~l~~~A~~~g~~~~ 123 (372)
T 4gmf_A 62 QITG-MPDIACIVVR-STVAGGAGTQLARHFLARGVHVIQEH---PLHPDDISSLQTLAQEQGCCYW 123 (372)
T ss_dssp GCCS-CCSEEEECCC---CTTSHHHHHHHHHHHTTCEEEEES---CCCHHHHHHHHHHHHHHTCCEE
T ss_pred HHhc-CCCEEEEECC-CcccchhHHHHHHHHHHcCCcEEEec---CCCHHHHHHHHHHHHHcCCEEE
Confidence 4443 5777665443 3333 566777778899999995 5664 454333 67787765
No 271
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.95 E-value=0.85 Score=48.32 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=26.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|.|+||..+|..|.+.|..|+ +.|.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~-~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVI-GVDV 31 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 479999999999999999999999964 4565
No 272
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=89.94 E-value=0.78 Score=46.59 Aligned_cols=115 Identities=15% Similarity=0.255 Sum_probs=68.1
Q ss_pred cEEEEecc-chHHHHHHHHHHHCCCeEEEEEcCC--CeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCC
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs~--G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~e 493 (588)
.+++|+|. |+.|+.+++.|.+.|.++|+-.+.+ |.-. .|+ .- |+.. ++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i--~G~------------------~v----y~sl-----~e 64 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNV--HGV------------------PV----FDTV-----KE 64 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEE--TTE------------------EE----ESSH-----HH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceE--CCE------------------ee----eCCH-----HH
Confidence 46889998 9999999999999999877655542 1100 111 00 1111 11
Q ss_pred cc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC-CCCC--HHHHHHHHHCCceEeccccccccCceee
Q 007820 494 PW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN-MPCT--PEAVDVLKKANVLIAPAMAAGAGGVVAG 564 (588)
Q Consensus 494 il-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN-~P~T--~eA~~iL~~rGI~viPD~laNAGGVivS 564 (588)
+. ..++|+++-|... ....+.+...++.+++.|+..+- .+.+ .+..+..++.|+.++ --|+-|++..
T Consensus 65 l~~~~~~Dv~ii~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi---GPNc~Gii~~ 135 (294)
T 2yv1_A 65 AVKETDANASVIFVPA-PFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII---GPNTPGIASP 135 (294)
T ss_dssp HHHHHCCCEEEECCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE---CSSCCEEEET
T ss_pred HhhcCCCCEEEEccCH-HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE---cCCCceeecc
Confidence 11 1267888876543 34566667777789995555433 3322 244566778899665 2345565553
No 273
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.85 E-value=1.6 Score=42.66 Aligned_cols=115 Identities=10% Similarity=0.024 Sum_probs=60.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhcc-CCceEeCCCCcc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTY-ARSKYYDEAKPW 495 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~-p~a~~i~~~eil 495 (588)
++|+|.|.|++|..+|..|.+.|..| .+.|. +.+.+..+.+ ..-.+....... ......+..++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~r----------~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 69 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDV-TLIDQ----------WPAHIEAIRK---NGLIADFNGEEVVANLPIFSPEEID 69 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------CHHHHHHHHH---HCEEEEETTEEEEECCCEECGGGCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcE-EEEEC----------CHHHHHHHHh---CCEEEEeCCCeeEecceeecchhhc
Confidence 58999999999999999999999985 45555 2233322222 110111000000 001111222222
Q ss_pred c--cccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCCCC-HHHHHHHHHC
Q 007820 496 N--ERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMPCT-PEAVDVLKKA 546 (588)
Q Consensus 496 ~--~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P~T-~eA~~iL~~r 546 (588)
. .+||++|-|.....+ .+-...|.. ..-++|+.-.|+..+ ....+.|.+.
T Consensus 70 ~~~~~~d~vi~~v~~~~~-~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 70 HQNEQVDLIIALTKAQQL-DAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKE 124 (316)
T ss_dssp TTSCCCSEEEECSCHHHH-HHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGG
T ss_pred ccCCCCCEEEEEeccccH-HHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCc
Confidence 2 289999999876543 333344322 123567777787654 3333444443
No 274
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.81 E-value=0.58 Score=45.19 Aligned_cols=33 Identities=6% Similarity=0.081 Sum_probs=27.7
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCC----CeEEEEEcC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDA 448 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~G----AKVVaVSDs 448 (588)
+.++|.|.|.|++|..+|..|.+.| .. |.+.|.
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~-v~~~~~ 39 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKEN-LFYYGP 39 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGG-EEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCe-EEEEeC
Confidence 3468999999999999999999988 45 466675
No 275
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.71 E-value=1.2 Score=45.04 Aligned_cols=106 Identities=19% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCC----CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYG----AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~G----AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
+-++|.|+|.|++|..+|..|.+.| .. |.+.|. +++. +.+..+.+ + +....+
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~-V~v~~r-----~~~~---~~~~~l~~----------~-----G~~~~~ 76 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHK-IMASSP-----DMDL---ATVSALRK----------M-----GVKLTP 76 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGG-EEEECS-----CTTS---HHHHHHHH----------H-----TCEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcce-EEEECC-----CccH---HHHHHHHH----------c-----CCEEeC
Confidence 3468999999999999999999999 56 456665 2221 12221211 1 222221
Q ss_pred CCCccccccceeecCCCcCccchhhHHhhhh-c-CCeEEEecCCCCCCHHHHHHHHH
Q 007820 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVN-S-GCRILVEGSNMPCTPEAVDVLKK 545 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~n~It~enA~~l~~-~-~akiVvEgAN~P~T~eA~~iL~~ 545 (588)
...-.-.+|||+|-|.....+ .+-+..|.. . .-++|+.-+|+-...+..+.|.+
T Consensus 77 ~~~e~~~~aDvVilav~~~~~-~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~ 132 (322)
T 2izz_A 77 HNKETVQHSDVLFLAVKPHII-PFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSA 132 (322)
T ss_dssp CHHHHHHHCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHT
T ss_pred ChHHHhccCCEEEEEeCHHHH-HHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhh
Confidence 110112379999998875433 333333322 1 23578888776444444556655
No 276
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.47 E-value=0.31 Score=52.34 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=31.9
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEc
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++|++|+|.|.|.||...++.|.+.|++|+.|+.
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred EECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 368999999999999999999999999999765553
No 277
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=89.44 E-value=0.13 Score=50.18 Aligned_cols=107 Identities=11% Similarity=0.114 Sum_probs=59.3
Q ss_pred CCHHHHHHH--HHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccHHHH
Q 007820 322 KSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATGYGL 399 (588)
Q Consensus 322 ~S~~El~R~--~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG~GV 399 (588)
.++.-+.|+ +-+|..+|.+- +=--++.+|++...+-....-. |++++=|..|.. --||=|
T Consensus 3 i~~~~~~Rl~~y~r~l~~l~~~---------g~~~iss~~l~~~~~~~~~~iR--------kdls~~g~~G~~-g~gY~v 64 (211)
T 2dt5_A 3 VPEAAISRLITYLRILEELEAQ---------GVHRTSSEQLGGLAQVTAFQVR--------KDLSYFGSYGTR-GVGYTV 64 (211)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHT---------TCCEECHHHHHHHHTSCHHHHH--------HHHHHTTCCCCT-TTCEEH
T ss_pred CCHHHHHHHHHHHHHHHHHHHc---------CCcEECHHHHHHHhCCCHHHee--------chHHHHHHhcCC-ceeEEh
Confidence 356677775 55666666542 1112577888776643211100 111111222211 113334
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHH--HHHCCCeEEEEEcC
Q 007820 400 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEK--LIAYGAIPVSVSDA 448 (588)
Q Consensus 400 ~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~--L~e~GAKVVaVSDs 448 (588)
.+-.++.-+.+|.+ +.++|+|.|.|++|..+++. ... |+++|++.|.
T Consensus 65 ~~L~~~~~~~lg~~-~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~ 113 (211)
T 2dt5_A 65 PVLKRELRHILGLN-RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV 113 (211)
T ss_dssp HHHHHHHHHHHTTT-SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES
T ss_pred HHHHHHHHHHhCcC-CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC
Confidence 33344443445543 34799999999999999985 234 8999999997
No 278
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.16 E-value=0.51 Score=45.03 Aligned_cols=105 Identities=12% Similarity=0.191 Sum_probs=60.8
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC----
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE---- 491 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~---- 491 (588)
.++|+|.|+|.||+.+|+.|.+.|. |+ +.|. |++ .+ .... .+ ...+.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~-vid~-----~~~-----~~---~~~~--~~-----------~~~i~gd~~~ 60 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FV-LAED-----ENV-----RK---KVLR--SG-----------ANFVHGDPTR 60 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EE-EESC-----GGG-----HH---HHHH--TT-----------CEEEESCTTC
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EE-EEEC-----CHH-----HH---HHHh--cC-----------CeEEEcCCCC
Confidence 3589999999999999999999988 54 5565 332 22 1111 11 111111
Q ss_pred CCcc----ccccceeecCCCcCccch---hhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce--Eecc
Q 007820 492 AKPW----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL--IAPA 553 (588)
Q Consensus 492 ~eil----~~dcDILIPcA~~n~It~---enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~--viPD 553 (588)
.+.| -..+|.+|-|......|. ..|..+ ..++++|+...| ++..+.|++.|+- +.|.
T Consensus 61 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~-~~~~~iia~~~~----~~~~~~l~~~G~~~vi~p~ 126 (234)
T 2aef_A 61 VSDLEKANVRGARAVIVDLESDSETIHCILGIRKI-DESVRIIAEAER----YENIEQLRMAGADQVISPF 126 (234)
T ss_dssp HHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHH-CSSSEEEEECSS----GGGHHHHHHHTCSEEECHH
T ss_pred HHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHH-CCCCeEEEEECC----HhHHHHHHHCCCCEEECHH
Confidence 1122 137898888776544443 344443 234588887643 2334667777764 4453
No 279
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.12 E-value=0.49 Score=48.25 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=28.1
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCe-EEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAI-PVSV 445 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAK-VVaV 445 (588)
-.|.+|+|.|.|.||..+++++...|++ |+++
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 210 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVIT 210 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 3688999999999999999999999998 5544
No 280
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.09 E-value=0.87 Score=46.74 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=34.1
Q ss_pred HHHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEc
Q 007820 406 ILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 406 ~l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
++...+....|.+|+|.|.|.||..+++++...|++|+++..
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 219 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 344445444799999999999999999999999999876653
No 281
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.05 E-value=1.7 Score=43.97 Aligned_cols=99 Identities=11% Similarity=0.079 Sum_probs=56.2
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccC-CceEeCCCCc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYYDEAKP 494 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p-~a~~i~~~ei 494 (588)
..+|+|.|.|++|..+|..|.+.|..| .+.|. +.+++..|.+ ....+ |..... +....++.+-
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V-~~~~r----------~~~~~~~l~~---~g~~~--~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEV-ILWAR----------RKEIVDLINV---SHTSP--YVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE-EEECS----------SHHHHHHHHH---HSCBT--TBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeE-EEEeC----------CHHHHHHHHH---hCCcc--cCCCCeeeEEEeCCHHH
Confidence 468999999999999999999999985 55555 2334332322 11111 100000 1222222111
Q ss_pred cccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC
Q 007820 495 WNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (588)
Q Consensus 495 l~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (588)
..++|++|-|-.. ....+-+..|.. .-++|+.-+|+
T Consensus 78 -~~~aDvVil~vk~-~~~~~v~~~l~~-~~~~vv~~~nG 113 (335)
T 1z82_A 78 -IKKEDILVIAIPV-QYIREHLLRLPV-KPSMVLNLSKG 113 (335)
T ss_dssp -CCTTEEEEECSCG-GGHHHHHTTCSS-CCSEEEECCCC
T ss_pred -hcCCCEEEEECCH-HHHHHHHHHhCc-CCCEEEEEeCC
Confidence 3478999988764 333334444422 34588888886
No 282
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.05 E-value=0.35 Score=51.53 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=33.0
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~ 449 (588)
+++|++|.|.|.|..|..+|++|.+.|++ |.++|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~-V~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAI-VTVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCE-EEEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCE-EEEEeCC
Confidence 57899999999999999999999999999 5788873
No 283
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.04 E-value=0.35 Score=47.02 Aligned_cols=34 Identities=15% Similarity=0.329 Sum_probs=30.5
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++++|+|.|.|-+|+++++.|.+.|.+|++++-+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4679999999999999999999999998887654
No 284
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=88.96 E-value=0.4 Score=49.33 Aligned_cols=115 Identities=13% Similarity=0.201 Sum_probs=66.0
Q ss_pred CCcEEEEec-cchHHHH-HH----HHHHHCC-CeE-----E----EEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhh
Q 007820 415 KGLRCVVSG-SGKIAMH-VL----EKLIAYG-AIP-----V----SVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRD 478 (588)
Q Consensus 415 ~GkrVaIQG-fGNVG~~-aA----e~L~e~G-AKV-----V----aVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~ 478 (588)
+-.||+|.| +|.+|.. .+ +.+.+.+ ..+ + +|+|. |+ ++...+.+
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~-----~~-----~~a~~~a~---------- 64 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR-----SA-----EKVEALAK---------- 64 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS-----SS-----HHHHHHHH----------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC-----CH-----HHHHHHHH----------
Confidence 346899999 9999996 55 6665554 221 1 46666 22 23211111
Q ss_pred hhhccCCceEeC-CCCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHH---HHHHHCCceEecc
Q 007820 479 YSKTYARSKYYD-EAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAV---DVLKKANVLIAPA 553 (588)
Q Consensus 479 y~~~~p~a~~i~-~~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~---~iL~~rGI~viPD 553 (588)
.++-....+ -++++ +.++|+++-|+ .+..+.+.+...++.|..+++|=-=..+..++. +..+++|+.+...
T Consensus 65 ---~~~~~~~~~~~~~ll~~~~iD~V~i~t-p~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~ 140 (383)
T 3oqb_A 65 ---RFNIARWTTDLDAALADKNDTMFFDAA-TTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTV 140 (383)
T ss_dssp ---HTTCCCEESCHHHHHHCSSCCEEEECS-CSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred ---HhCCCcccCCHHHHhcCCCCCEEEECC-CchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 111111222 24455 35789998655 557888888888889999998831111223444 3346778765443
No 285
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=88.92 E-value=0.18 Score=53.05 Aligned_cols=90 Identities=11% Similarity=0.122 Sum_probs=51.9
Q ss_pred cEEEEec-cchHHHHHHH-HHHHCCC---eEEEE-EcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 417 LRCVVSG-SGKIAMHVLE-KLIAYGA---IPVSV-SDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe-~L~e~GA---KVVaV-SDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
++|+|.| +|.||+.+.+ .|.+... .++.+ +++.|.-+ ..+ ... .+ ......
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v-------~~~------~g~--~i--------~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA-------PSF------GGT--TG--------TLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC-------CGG------GTC--CC--------BCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCc-------ccc------CCC--ce--------EEEecC
Confidence 4899999 9999999999 6665543 33333 33333211 000 000 00 011111
Q ss_pred CCCccccccceeecCCCcCccchhhHHhhhhcCCe-EEEecC
Q 007820 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCR-ILVEGS 531 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~n~It~enA~~l~~~~ak-iVvEgA 531 (588)
..+.| .+|||+|-|+ ....+.+.+..+.+.+|| +|+..+
T Consensus 59 ~~~~~-~~~DvVf~a~-g~~~s~~~a~~~~~~G~k~vVID~s 98 (367)
T 1t4b_A 59 DLEAL-KALDIIVTCQ-GGDYTNEIYPKLRESGWQGYWIDAA 98 (367)
T ss_dssp CHHHH-HTCSEEEECS-CHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred ChHHh-cCCCEEEECC-CchhHHHHHHHHHHCCCCEEEEcCC
Confidence 11124 3899999876 456778888888888884 666654
No 286
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=88.86 E-value=0.37 Score=48.90 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=68.3
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCC-CCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC-CCc
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDE-DGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE-AKP 494 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~Iydp-dGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~-~ei 494 (588)
.||+|+|+|..|...++.| ..+++|++|+|. ++ +-. +++ .+...+.+ + +....++ +++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~-----~~~~~~--~~~---~~~~~~~~-~--------~~~~~~~~~~l 62 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPG-----VPEEDL--SKL---EKAISEMN-I--------KPKKYNNWWEM 62 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECS-----STTCCC--HHH---HHHHHTTT-C--------CCEECSSHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecC-----CchhhH--HHH---HHHHHHcC-C--------CCcccCCHHHH
Confidence 5899999999998777777 678999999998 44 221 121 11111111 0 1122222 445
Q ss_pred cc-cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHH---HHHCCce
Q 007820 495 WN-ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDV---LKKANVL 549 (588)
Q Consensus 495 l~-~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~i---L~~rGI~ 549 (588)
+. .++|+++-|+ .+..+.+.+...++.|..+++|=-=.....|+.++ .+++|+.
T Consensus 63 l~~~~vD~V~I~t-p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 63 LEKEKPDILVINT-VFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp HHHHCCSEEEECS-SHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred hcCCCCCEEEEeC-CcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 53 5789988765 55677788888888899999985211122355433 3566765
No 287
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.86 E-value=0.43 Score=45.43 Aligned_cols=37 Identities=14% Similarity=0.205 Sum_probs=27.6
Q ss_pred CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 411 NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 411 g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+..+..++|+|.|.|++|..+|..|.+.|..|+ +.|.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~-~~~~ 50 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVT-YYGS 50 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEE-EECT
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEcC
Confidence 456888999999999999999999999999854 4454
No 288
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=88.85 E-value=1.4 Score=46.93 Aligned_cols=124 Identities=12% Similarity=0.140 Sum_probs=70.0
Q ss_pred cEEEEecc-chHHHHHHHHHHHCC--CeEEEE-EcCCCeeeCCCCCCHHHHHHHHHHhhccC-C------hhhhhhccC-
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYG--AIPVSV-SDAKGYLVDEDGFDYMKISFLRDIKSQQR-S------LRDYSKTYA- 484 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~G--AKVVaV-SDs~G~IydpdGLDie~L~~L~~~k~~~g-s------L~~y~~~~p- 484 (588)
++|+|.|+ |.||+.+++.+.+.. .+|+++ +++ +++.+........-.. . ..++.+..+
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~----------ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR----------NVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS----------CHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC----------CHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhcc
Confidence 78999999 999999999998853 788888 554 3444321111000000 0 000000011
Q ss_pred -CceEeCCC----CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHH----HHHHHHCCceEecc
Q 007820 485 -RSKYYDEA----KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEA----VDVLKKANVLIAPA 553 (588)
Q Consensus 485 -~a~~i~~~----eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA----~~iL~~rGI~viPD 553 (588)
+.+.+.+. ++...++|+++.|..+ ....+.+..-++.|-.++. ||=.+...+ .+..+++|+.++|-
T Consensus 75 ~~~~v~~g~~~~~el~~~~iDvVV~ai~G-~aGl~ptlaAi~aGK~Vvl--ANKE~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 75 SSVEAAAGADALVEAAMMGADWTMAAIIG-CAGLKATLAAIRKGKTVAL--ANKESLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp CSSEEEESHHHHHHHHTSCCSEEEECCCS-GGGHHHHHHHHHTTSEEEE--CCSHHHHTTHHHHHHHHHHHTCEEEEC
T ss_pred CCcEEEeCccHHHHHHcCCCCEEEEeCCC-HHHHHHHHHHHHCCCEEEE--eCcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 11122111 2334458999999755 3445555554567877777 576543333 34556789999997
No 289
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=88.74 E-value=3 Score=37.15 Aligned_cols=108 Identities=11% Similarity=0.055 Sum_probs=63.0
Q ss_pred cEEEEecc----chHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 417 LRCVVSGS----GKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 417 krVaIQGf----GNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
++|+|.|. +.+|..+.+.|.+.|++|..| ||.+= .+.+. +-||....+
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pV--------nP~~~----------------~i~G~-~~y~sl~dl--- 56 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPV--------GRKKG----------------EVLGK-TIINERPVI--- 56 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEE--------SSSCS----------------EETTE-ECBCSCCCC---
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEE--------CCCCC----------------cCCCe-eccCChHHC---
Confidence 68999997 779999999999999988766 44320 01110 112322222
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccccccccCce
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMAAGAGGVV 562 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~laNAGGVi 562 (588)
-+ .|+++-|..... ..+-.+.+.+.++|.|+= .-+...+|+.++.++.||.++| |+=||.
T Consensus 57 --p~--vDlavi~~p~~~-v~~~v~e~~~~g~k~v~~-~~G~~~~e~~~~a~~~Girvv~----nC~gv~ 116 (122)
T 3ff4_A 57 --EG--VDTVTLYINPQN-QLSEYNYILSLKPKRVIF-NPGTENEELEEILSENGIEPVI----GCTLVM 116 (122)
T ss_dssp --TT--CCEEEECSCHHH-HGGGHHHHHHHCCSEEEE-CTTCCCHHHHHHHHHTTCEEEE----SCHHHH
T ss_pred --CC--CCEEEEEeCHHH-HHHHHHHHHhcCCCEEEE-CCCCChHHHHHHHHHcCCeEEC----CcCeEE
Confidence 12 455544433211 122222222337776652 3344678999999999999985 554443
No 290
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.72 E-value=1.2 Score=45.24 Aligned_cols=75 Identities=9% Similarity=0.174 Sum_probs=47.1
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
-|+|+|.|.|.+|...|..|. .|..| .+.|. +.+.+..+.+. +.+- ...+++..++-+-
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V-~v~d~----------~~~~~~~~~~~------l~~~--~~~~i~~~~~~~~- 70 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEV-VLQDV----------SEKALEAAREQ------IPEE--LLSKIEFTTTLEK- 70 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEE-EEECS----------CHHHHHHHHHH------SCGG--GGGGEEEESSCTT-
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEE-EEEEC----------CHHHHHHHHHH------HHHH--HhCCeEEeCCHHH-
Confidence 479999999999999999999 99985 55554 34444333322 1000 0012333222122
Q ss_pred ccccceeecCCCcCcc
Q 007820 496 NERCDVAFPCASQNEI 511 (588)
Q Consensus 496 ~~dcDILIPcA~~n~I 511 (588)
-.+||++|.|..++.-
T Consensus 71 ~~~aDlVieavpe~~~ 86 (293)
T 1zej_A 71 VKDCDIVMEAVFEDLN 86 (293)
T ss_dssp GGGCSEEEECCCSCHH
T ss_pred HcCCCEEEEcCcCCHH
Confidence 3589999999988753
No 291
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=88.60 E-value=0.84 Score=47.70 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=58.5
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCC------CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYG------AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY 488 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~G------AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~ 488 (588)
-++|+|.| +|.||+.+.+.|.+.+ ..++++.+.+ ..|-.... ..+.+.... .. ....
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-----~agk~~~~---------~~~~l~~~~-~~-~~~~ 72 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-----SAGSTLGE---------HHPHLTPLA-HR-VVEP 72 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-----CTTSBGGG---------TCTTCGGGT-TC-BCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-----cCCCchhh---------hcccccccc-ee-eecc
Confidence 36999999 9999999999999876 4778876541 11211100 001111000 00 0111
Q ss_pred eCCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCC
Q 007820 489 YDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP 534 (588)
Q Consensus 489 i~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P 534 (588)
.+. +.|. +|||+|-|+. ...+.+-++.+ +.++++|-=++-.-
T Consensus 73 ~~~-~~~~-~~DvVf~alg-~~~s~~~~~~~-~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 73 TEA-AVLG-GHDAVFLALP-HGHSAVLAQQL-SPETLIIDCGADFR 114 (352)
T ss_dssp CCH-HHHT-TCSEEEECCT-TSCCHHHHHHS-CTTSEEEECSSTTT
T ss_pred CCH-HHhc-CCCEEEECCC-CcchHHHHHHH-hCCCEEEEECCCcc
Confidence 111 1233 8999997764 44678888888 88998877666543
No 292
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=88.54 E-value=0.51 Score=45.98 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=32.7
Q ss_pred ccHHHHHHHHHHHHH-HhCCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 394 ATGYGLVFFAQLILA-DMNKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 394 ATG~GV~~~i~~~l~-~~g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
+|.-|+-.+.+.++- ....+++||+|+|.|. |.+|.++|+.|.+.|++|+.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 6 HHSSGVDLGTENLYFQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp ------------------CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccccccccCcceehhhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 444455555555543 3456899999999984 89999999999999999876654
No 293
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=88.53 E-value=0.9 Score=47.11 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=60.4
Q ss_pred CcEEEEec-cchHHHHHHHHHHHC-CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhc-cCChhhhhhccCCceEeC-C
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAY-GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ-QRSLRDYSKTYARSKYYD-E 491 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~-GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~-~gsL~~y~~~~p~a~~i~-~ 491 (588)
-.||+|.| +|.+|+.+++.|.+. ...++++.+++ ...|-..+.. +... .+.+..-. ....+.+ .
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~----~~~g~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~d 71 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASP----SKIGKKYKDA-----VKWIEQGDIPEEV---QDLPIVSTN 71 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCG----GGTTSBHHHH-----CCCCSSSSCCHHH---HTCBEECSS
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecCh----hhcCCCHHHh-----cCcccccccccCC---ceeEEeeCC
Confidence 36899999 999999999998775 46888987431 1222222110 0000 00000000 0011111 1
Q ss_pred CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
.+.| .+||+++-|+ ....+.+.+..+.+.++++|--.+.
T Consensus 72 ~~~~-~~vDvVf~at-p~~~s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 72 YEDH-KDVDVVLSAL-PNELAESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp GGGG-TTCSEEEECC-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred HHHh-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEECCcc
Confidence 1234 4899999664 6667888899888899998876664
No 294
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=88.46 E-value=0.55 Score=48.52 Aligned_cols=92 Identities=17% Similarity=0.281 Sum_probs=56.0
Q ss_pred CcEEEEec-cchHHHHHHHHHHHC---CCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAY---GAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~---GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
..+|+|.| +|.||+.+.+.|.+. ...++++.+.+ ..|-.+. .... .+ .....+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-----~~G~~~~-------~~~~--~i--------~~~~~~~ 60 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-----SEGKTYR-------FNGK--TV--------RVQNVEE 60 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-----TTTCEEE-------ETTE--EE--------EEEEGGG
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-----CCCCcee-------ecCc--ee--------EEecCCh
Confidence 36899999 999999999999887 36788888642 1121000 0000 00 0011122
Q ss_pred CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 492 AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 492 ~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
+.| .+||++|-|+ ....+.+.+..+.+.+|++|--++-
T Consensus 61 -~~~-~~vDvVf~a~-g~~~s~~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 61 -FDW-SQVHIALFSA-GGELSAKWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp -CCG-GGCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred -HHh-cCCCEEEECC-CchHHHHHHHHHHHcCCEEEEcCCc
Confidence 244 3788888775 4446777777777778877765543
No 295
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=88.31 E-value=1.9 Score=44.39 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=28.8
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCC-eEEEEEcC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaVSDs 448 (588)
-.|.+|+|.|.|.||..+++++...|+ +|+ ++|+
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi-~~~~ 215 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVI-LSTR 215 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEE-EECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEE-EECC
Confidence 368899999999999999999999999 554 4454
No 296
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.28 E-value=1.3 Score=48.05 Aligned_cols=32 Identities=9% Similarity=-0.111 Sum_probs=27.8
Q ss_pred CcEEEEeccchHHHHHHHHHHHC-CC-eEEEEEcC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAY-GA-IPVSVSDA 448 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~-GA-KVVaVSDs 448 (588)
-++|+|.|.|.||..+|..|.+. |. .|+ +.|.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~ 51 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQR 51 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEEC
Confidence 36899999999999999999999 99 854 5565
No 297
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=88.09 E-value=1.1 Score=47.83 Aligned_cols=49 Identities=12% Similarity=0.077 Sum_probs=34.3
Q ss_pred HHHHHHHHHHh-CCCCCCcEEEEecc-chHHHHHHHHHHHCCCe--EEEEEcC
Q 007820 400 VFFAQLILADM-NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAI--PVSVSDA 448 (588)
Q Consensus 400 ~~~i~~~l~~~-g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAK--VVaVSDs 448 (588)
+......|... .......+|+|.|. |+||..+++.+..+|+. .|.+.|.
T Consensus 197 ~q~~~~~l~~~~~~g~~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~ 249 (394)
T 2qrj_A 197 VKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDI 249 (394)
T ss_dssp HHHHHHHHHHHHTTTCCCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECH
T ss_pred HHHHHHHHhhhhccCCCCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeec
Confidence 44444445431 12335668999999 99999999999999983 3566664
No 298
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.06 E-value=0.6 Score=45.61 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=30.6
Q ss_pred CCCCCcEEEEeccc---hHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGSG---KIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGfG---NVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+|+||+++|.|.+ -+|..+|+.|.+.|++| .++|.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~V-vi~~r 40 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKL-VFTYR 40 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEE-EEEES
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEE-EEEEC
Confidence 37899999999963 59999999999999995 45665
No 299
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.97 E-value=0.49 Score=42.18 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=27.4
Q ss_pred EEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 418 RCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 418 rVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.|+|+|.|-+|..+|..|.+.|.+ |.|.|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-VHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 499999999999999999999999 578785
No 300
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=87.96 E-value=0.57 Score=48.53 Aligned_cols=89 Identities=20% Similarity=0.244 Sum_probs=53.8
Q ss_pred cEEEEec-cchHHHHHHHHHHHCC---CeEEEEEcCC--CeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIAYG---AIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD 490 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e~G---AKVVaVSDs~--G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~ 490 (588)
++|+|.| +|.||+.+++.|.+.+ ..++++.+.+ |..+.-+|. .+ .....+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~----------------~i--------~~~~~~ 62 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAES----------------SL--------RVGDVD 62 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTE----------------EE--------ECEEGG
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCc----------------ce--------EEecCC
Confidence 5899999 9999999999998654 4567777541 211100000 00 001111
Q ss_pred CCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 491 EAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 491 ~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
.+. | ..||++|-|+. ...+.+.+..+.+.++++|.=.|.
T Consensus 63 ~~~-~-~~~DvV~~a~g-~~~s~~~a~~~~~aG~kvId~Sa~ 101 (340)
T 2hjs_A 63 SFD-F-SSVGLAFFAAA-AEVSRAHAERARAAGCSVIDLSGA 101 (340)
T ss_dssp GCC-G-GGCSEEEECSC-HHHHHHHHHHHHHTTCEEEETTCT
T ss_pred HHH-h-cCCCEEEEcCC-cHHHHHHHHHHHHCCCEEEEeCCC
Confidence 222 4 37899888764 445677777777778887754443
No 301
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.89 E-value=1 Score=45.95 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=33.0
Q ss_pred HHHhCCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEc
Q 007820 407 LADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 407 l~~~g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
+...+....|.+|+|.|.|.||..+++++...|++|+++..
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~ 212 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 34444333789999999999999999999999999776653
No 302
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.71 E-value=0.49 Score=49.83 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=65.6
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~ 492 (588)
++.|++|+|.|+|.+|..+++.|...|++-|.+.|. +.+++..+.. . + ++..++.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r----------~~~ra~~la~---~------~-----g~~~~~~~ 219 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR----------TYERAVELAR---D------L-----GGEAVRFD 219 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS----------SHHHHHHHHH---H------H-----TCEECCGG
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC----------CHHHHHHHHH---H------c-----CCceecHH
Confidence 579999999999999999999999999933556665 2223211111 1 1 11212111
Q ss_pred Ccc--ccccceeecCCCc--CccchhhHHh-hhh---cCCeEEEecCCCC--CCHHHHHHHHHCCceE--eccc
Q 007820 493 KPW--NERCDVAFPCASQ--NEIDQSDAIN-LVN---SGCRILVEGSNMP--CTPEAVDVLKKANVLI--APAM 554 (588)
Q Consensus 493 eil--~~dcDILIPcA~~--n~It~enA~~-l~~---~~akiVvEgAN~P--~T~eA~~iL~~rGI~v--iPD~ 554 (588)
++- -..+||+|-|+.. ..++.+.... +.+ .+-.+++..+. | ++++ +..-.||.+ +||.
T Consensus 220 ~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~---l~~l~~v~l~d~d~l 289 (404)
T 1gpj_A 220 ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN-PRDVEEG---VENIEDVEVRTIDDL 289 (404)
T ss_dssp GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTT---GGGSTTEEEEEHHHH
T ss_pred hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC-CCCCCcc---ccccCCeEEEeHhhH
Confidence 111 1379999998754 3344444443 221 25567788777 5 3443 222345555 5554
No 303
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.54 E-value=1.4 Score=44.98 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=29.2
Q ss_pred CCCcEEEEe-ccchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVS-GSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQ-GfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|.+|+|. |.|.||..+++.+...|++|+++.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~ 199 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATA 199 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 468899999 689999999999999999977664
No 304
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=87.54 E-value=0.26 Score=50.95 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=53.2
Q ss_pred cEEEEec-cchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCCcc
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPW 495 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~eil 495 (588)
++|+|.| +|.||+.+.+.|.+.+..++.+...... ...| ..+. +...--.....+++ .|
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~--~~~g----------------~~l~-~~g~~i~v~~~~~~-~~ 60 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASP--RSAG----------------VRLA-FRGEEIPVEPLPEG-PL 60 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECG--GGSS----------------CEEE-ETTEEEEEEECCSS-CC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeecc--ccCC----------------CEEE-EcCceEEEEeCChh-hc
Confidence 3799999 9999999999998766543333210000 0001 0110 00000001111222 36
Q ss_pred ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 496 NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 496 ~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
+||++|.|+ ..-.+.+.+..+.+.+|++|-=++-
T Consensus 61 --~~DvV~~a~-g~~~s~~~a~~~~~~G~~vId~s~~ 94 (331)
T 2yv3_A 61 --PVDLVLASA-GGGISRAKALVWAEGGALVVDNSSA 94 (331)
T ss_dssp --CCSEEEECS-HHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred --CCCEEEECC-CccchHHHHHHHHHCCCEEEECCCc
Confidence 899999876 4556778888888888888876654
No 305
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.34 E-value=3.4 Score=42.62 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=31.4
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
-+.+++|.|.|.|..|..+++.+.++|.+|+++ |.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~-d~ 43 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVL-DP 43 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE-EC
Confidence 467899999999999999999999999998776 44
No 306
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.29 E-value=1.1 Score=45.89 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=28.3
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCC-eEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaV 445 (588)
-.|.+|+|.|.|.||..++.++...|+ +|+++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~ 224 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGI 224 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 468899999999999999999999999 66655
No 307
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.28 E-value=1.6 Score=43.84 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=31.7
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHH--CCCeEEEEEc
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIA--YGAIPVSVSD 447 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e--~GAKVVaVSD 447 (588)
.++++++|+|.| .|-+|+++++.|.+ .|++|+++.-
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 468899999996 59999999999999 8999887754
No 308
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.14 E-value=0.63 Score=44.95 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=29.5
Q ss_pred CCCCcEEEEecc-c-hHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSGS-G-KIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQGf-G-NVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.|. | .+|.++|+.|.+.|++|+.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~ 53 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS 53 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEe
Confidence 589999999998 8 59999999999999997654
No 309
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=86.84 E-value=0.81 Score=43.26 Aligned_cols=36 Identities=31% Similarity=0.309 Sum_probs=31.4
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|++|+|.| .|.+|+++|+.|.+.|++|+.+.+.
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 47899999998 5899999999999999998877554
No 310
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.73 E-value=1.2 Score=41.14 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=29.0
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|++|+|.| .|.+|..+++.+...|++|+++.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~ 70 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA 70 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEe
Confidence 4689999999 79999999999999999976653
No 311
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=86.72 E-value=1.3 Score=46.32 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=61.7
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhc-cCChhhhhhccCCceEeCCC
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ-QRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~-~gsL~~y~~~~p~a~~i~~~ 492 (588)
..+|+|.| .|.||+-+.++|.+.- ..++.++.+ ...|-.+..+ +... ...+....... ..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-----~saGk~~~~~-----~p~~~~~~~~~~~~~~-~v~~~~~~ 75 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-----GSVGKPYGEV-----VRWQTVGQVPKEIADM-EIKPTDPK 75 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-----TTTTSBHHHH-----CCCCSSSCCCHHHHTC-BCEECCGG
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-----hhcCCChhHh-----cccccccccccccccc-eEEeCCHH
Confidence 46899999 6999999999887753 567777654 3445443321 0000 00000000000 11112222
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (588)
. + .+|||+|-|+ ....+.+-+..+++.+|++|-=+|..
T Consensus 76 ~-~-~~vDvvf~a~-p~~~s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 76 L-M-DDVDIIFSPL-PQGAAGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp G-C-TTCCEEEECC-CTTTHHHHHHHHHHTTCEEEECSSTT
T ss_pred H-h-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCCc
Confidence 2 2 4899999986 45567788888888899998877653
No 312
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=86.72 E-value=1.3 Score=46.32 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=61.5
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCC-CeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhc-cCChhhhhhccCCceEeCCC
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYG-AIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQ-QRSLRDYSKTYARSKYYDEA 492 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~G-AKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~-~gsL~~y~~~~p~a~~i~~~ 492 (588)
..+|+|.| .|.||+-+.++|.+.- ..++.++.+ ...|-.+..+ +... ...+....... ..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~-----~saGk~~~~~-----~p~~~~~~~~~~~~~~-~v~~~~~~ 75 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK-----GSVGKPYGEV-----VRWQTVGQVPKEIADM-EIKPTDPK 75 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES-----TTTTSBHHHH-----CCCCSSSCCCHHHHTC-BCEECCGG
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc-----hhcCCChhHh-----cccccccccccccccc-eEEeCCHH
Confidence 46899999 6999999999887753 567777654 3445443321 0000 00000000000 11112222
Q ss_pred CccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC
Q 007820 493 KPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM 533 (588)
Q Consensus 493 eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~ 533 (588)
. + .+|||+|-|+ ....+.+-+..+++.+|++|-=+|..
T Consensus 76 ~-~-~~vDvvf~a~-p~~~s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 76 L-M-DDVDIIFSPL-PQGAAGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp G-C-TTCCEEEECC-CTTTHHHHHHHHHHTTCEEEECSSTT
T ss_pred H-h-cCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCCc
Confidence 2 2 4899999986 45567788888888899998877653
No 313
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=86.67 E-value=0.41 Score=46.79 Aligned_cols=111 Identities=11% Similarity=0.155 Sum_probs=51.7
Q ss_pred CCCCCHHHHHHH--HHHHHHHHHhhcCCCCccCCCCCCCChhHHHHHHHHHhhHhCCCCccccCCcccccCCCCCCCccH
Q 007820 319 PKGKSDNEIMRF--CQSFMNEIHRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRTEATG 396 (588)
Q Consensus 319 P~~~S~~El~R~--~r~f~~eL~r~IGp~~DVpApDiGt~~reM~~i~~~y~~l~g~~~g~vTGKp~~~GGs~~r~eATG 396 (588)
++..++.-+.|+ +-+|..+|..- +=--++.+|++...+-....-. |++++=|..|.. --|
T Consensus 5 ~~~i~~~~~~Rl~~Y~r~l~~l~~~---------g~~~iss~~l~~~~~~~~~~iR--------kdls~fg~~G~~-g~g 66 (215)
T 2vt3_A 5 QSKIPQATAKRLPLYYRFLKNLHAS---------GKQRVSSAELSDAVKVDSATIR--------RDFSYFGALGKK-GYG 66 (215)
T ss_dssp ------CHHHHHHHHHHHHHHHHHT---------TCCEECHHHHHHHHCCCHHHHH--------HHHHHTTCCC------
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHc---------CCcEECHHHHHHHhCCCHHHee--------chHHHHHHhcCC-cce
Confidence 344566677775 55666666542 1112577888766542211000 122221222210 112
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEeccchHHHHHHHH--HHHCCCeEEEEEcC
Q 007820 397 YGLVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEK--LIAYGAIPVSVSDA 448 (588)
Q Consensus 397 ~GV~~~i~~~l~~~g~~l~GkrVaIQGfGNVG~~aAe~--L~e~GAKVVaVSDs 448 (588)
|=|.+-.++.-+.+|.+ +.++|+|.|.|++|+.+++. +...|.++|++.|.
T Consensus 67 Y~v~~L~~~~~~~lg~~-~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~ 119 (215)
T 2vt3_A 67 YNVDYLLSFFRKTLDQD-EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI 119 (215)
T ss_dssp EEHHHHHHHHHHHHHHC----CEEEECCSHHHHHHHHCC------CCEEEEEES
T ss_pred EEhHHHHHHHHHHhCcC-CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC
Confidence 22322223332223322 23689999999999999994 44568999999997
No 314
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.46 E-value=2.4 Score=45.64 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCCCCcEEEEeccc----------hHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhh
Q 007820 402 FAQLILADMNKELKGLRCVVSGSG----------KIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKS 471 (588)
Q Consensus 402 ~i~~~l~~~g~~l~GkrVaIQGfG----------NVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~ 471 (588)
.++.+.+.++.+++|+||+|-|+- .-+..+++.|.+.|++| . +|||.-. +. .+.
T Consensus 308 ~~~~i~~~l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v-~-------~~DP~~~--~~------~~~ 371 (446)
T 4a7p_A 308 MGRKVIKAMGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATV-K-------AYDPEGV--EQ------ASK 371 (446)
T ss_dssp HHHHHHHHTTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEE-E-------EECSSCH--HH------HGG
T ss_pred HHHHHHHHhcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEE-E-------EECCCCC--Hh------HHH
Confidence 344445667888999999999985 55789999999999996 3 4566531 11 111
Q ss_pred ccCChhhhhhccCCceEeCCCCccccccceeecCCCcCccchhhHHhhhh-cCCeEEEecCCCCCCHHHHHHHHHCCceE
Q 007820 472 QQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVN-SGCRILVEGSNMPCTPEAVDVLKKANVLI 550 (588)
Q Consensus 472 ~~gsL~~y~~~~p~a~~i~~~eil~~dcDILIPcA~~n~It~enA~~l~~-~~akiVvEgAN~P~T~eA~~iL~~rGI~v 550 (588)
.|++.++.+...-...++|++|-++--.+...-+...|.+ .+.++|+.+-|.-- + +.+++.|..|
T Consensus 372 ----------~~~~~~~~~~~~~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~i~D~r~~~~-~---~~~~~~g~~y 437 (446)
T 4a7p_A 372 ----------MLTDVEFVENPYAAADGADALVIVTEWDAFRALDLTRIKNSLKSPVLVDLRNIYP-P---AELERAGLQY 437 (446)
T ss_dssp ----------GCSSCCBCSCHHHHHTTBSEEEECSCCTTTTSCCHHHHHTTBSSCBEECSSCCSC-H---HHHHHTTCBC
T ss_pred ----------hcCCceEecChhHHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCCCEEEECCCCCC-H---HHHHhcCCEE
Confidence 1233333221111124789999887666543323333322 25689999999753 2 3456777665
No 315
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=86.44 E-value=1.1 Score=45.77 Aligned_cols=117 Identities=11% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCCcEEEEe-cc-chHHHHHHHHHHHCCCeEEEEEcCC--CeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 414 LKGLRCVVS-GS-GKIAMHVLEKLIAYGAIPVSVSDAK--GYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 414 l~GkrVaIQ-Gf-GNVG~~aAe~L~e~GAKVVaVSDs~--G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
+..++++|. |+ |+.|+..++.|.+.|.++|+..+.+ |.-+ .|+.+ ..++.+
T Consensus 11 ~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i--~G~~v------------y~sl~e----------- 65 (305)
T 2fp4_A 11 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTH--LGLPV------------FNTVKE----------- 65 (305)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE--TTEEE------------ESSHHH-----------
T ss_pred hCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceE--CCeee------------echHHH-----------
Confidence 455666665 98 9999999999999999977555542 1000 11110 001111
Q ss_pred CCCCcc-ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCC-CCH--HHHHHHHHC-CceEeccccccccCcee
Q 007820 490 DEAKPW-NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP-CTP--EAVDVLKKA-NVLIAPAMAAGAGGVVA 563 (588)
Q Consensus 490 ~~~eil-~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P-~T~--eA~~iL~~r-GI~viPD~laNAGGViv 563 (588)
+. ..++|+.+-|... ....+.+..+++.+++.|+.-+-+- ... +..+..+++ |+.++ --|+=|+++
T Consensus 66 ----l~~~~~vD~avI~vP~-~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li---GPnc~Gii~ 136 (305)
T 2fp4_A 66 ----AKEQTGATASVIYVPP-PFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI---GPNCPGVIN 136 (305)
T ss_dssp ----HHHHHCCCEEEECCCH-HHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE---CSSSCEEEE
T ss_pred ----hhhcCCCCEEEEecCH-HHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE---eCCCCeEec
Confidence 11 1256777755433 3445666777777999976655543 333 566777888 98876 234444444
No 316
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.36 E-value=0.88 Score=41.26 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=28.7
Q ss_pred CCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 415 KGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 415 ~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
++++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3479999996 99999999999999999877654
No 317
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.35 E-value=0.6 Score=47.80 Aligned_cols=31 Identities=19% Similarity=0.225 Sum_probs=28.6
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
|++|+|.|.|.||..+++++...|++|+++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~ 211 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMAN 211 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 9999999999999999999999999977664
No 318
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=86.33 E-value=2.2 Score=43.69 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=68.2
Q ss_pred CCcEEEEeccchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCCCC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAK 493 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~~e 493 (588)
..+++.|.|.|..|...++.|.+ .+.+-|.|.|.+ ..+++. .++....+ + .....+.++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------~a~~la--~~l~~~~g-~--------~~~~~~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------ASPEIL--ERIGRRCG-V--------PARMAAPAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------CCHHHH--HHHHHHHT-S--------CEEECCHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------HHHHHH--HHHHHhcC-C--------eEEEeCHHH
Confidence 56899999999999999998877 456667777763 222321 11111101 0 111111111
Q ss_pred ccccccceeecCCCcC--ccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEeccc
Q 007820 494 PWNERCDVAFPCASQN--EIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAM 554 (588)
Q Consensus 494 il~~dcDILIPcA~~n--~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~viPD~ 554 (588)
. -.+|||+|-|+... .+..+ .++.++-++.=|+..|-..|.+..+..++-.++-|.
T Consensus 180 a-v~~aDIVi~aT~s~~pvl~~~----~l~~G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD~ 237 (313)
T 3hdj_A 180 I-AAQADIVVTATRSTTPLFAGQ----ALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVEW 237 (313)
T ss_dssp H-HHHCSEEEECCCCSSCSSCGG----GCCTTCEEEECCCSSTTCCCCCHHHHHHCSEEEESC
T ss_pred H-HhhCCEEEEccCCCCcccCHH----HcCCCcEEEECCCCCCchhhcCHHHHhcCCEEEECC
Confidence 1 13799999887643 33322 246689999999998866665555555553444453
No 319
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=86.29 E-value=1.3 Score=46.03 Aligned_cols=103 Identities=13% Similarity=0.193 Sum_probs=62.3
Q ss_pred cEEEEec-cchHHHHHHHHHHH-CCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe-CCCC
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIA-YGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAK 493 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e-~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i-~~~e 493 (588)
.+|+|.| .|.||+.+.+.|.+ -...++++..+++. ...|-.+.++ +..-++ ..++ ..+.. +.++
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~--~saGk~~~~~-----~p~~~~-~~~~-----~v~~~~~~~~ 71 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQS--NDAGKLISDL-----HPQLKG-IVEL-----PLQPMSDISE 71 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTC--TTTTSBHHHH-----CGGGTT-TCCC-----BEEEESSGGG
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCch--hhcCCchHHh-----CccccC-ccce-----eEeccCCHHH
Confidence 5899999 59999999999988 45677777554210 1334333221 000000 0000 11111 1222
Q ss_pred ccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCC
Q 007820 494 PWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMP 534 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P 534 (588)
+..+|||+|-|+ ....+.+-+..+.+.+|++|-=+|..-
T Consensus 72 -~~~~~Dvvf~a~-p~~~s~~~~~~~~~~g~~vIDlSa~fR 110 (337)
T 3dr3_A 72 -FSPGVDVVFLAT-AHEVSHDLAPQFLEAGCVVFDLSGAFR 110 (337)
T ss_dssp -TCTTCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred -HhcCCCEEEECC-ChHHHHHHHHHHHHCCCEEEEcCCccc
Confidence 225899999775 556678888888889999988777643
No 320
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.25 E-value=1.4 Score=47.14 Aligned_cols=31 Identities=13% Similarity=0.092 Sum_probs=26.5
Q ss_pred cEEEEeccchHHHHHHHHHHHC--CCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~--GAKVVaVSDs 448 (588)
++|+|.|.|.||..+|..|.+. |..|+ +.|.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~-~~d~ 38 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVT-VVDV 38 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEEC
Confidence 5899999999999999999998 78854 5565
No 321
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.17 E-value=0.7 Score=49.76 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=27.5
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.|++|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~-~~D~ 39 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVV-CVDK 39 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 599999999999999999999999965 4565
No 322
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.15 E-value=2 Score=46.33 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=26.2
Q ss_pred cEEEEeccchHHHHHHHHHHHC--CCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAY--GAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~--GAKVVaVSDs 448 (588)
++|+|.|.|.||..+|..|.+. |..|+ +.|.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D~ 42 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVDM 42 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEEC
Confidence 5899999999999999999998 67755 4554
No 323
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.02 E-value=0.7 Score=46.00 Aligned_cols=36 Identities=14% Similarity=0.348 Sum_probs=32.1
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++|++|+|.|. |-+|+++++.|.+.|++|+++.-
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 5789999999996 99999999999999999877653
No 324
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=85.91 E-value=0.93 Score=42.77 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=30.6
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVT 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3688999999985 9999999999999999976553
No 325
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=85.76 E-value=1 Score=43.48 Aligned_cols=34 Identities=32% Similarity=0.305 Sum_probs=29.8
Q ss_pred CCCCCcEEEEecc-ch--HHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GN--VG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.|. |. +|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFT 39 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence 4689999999996 56 9999999999999997655
No 326
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=85.73 E-value=0.83 Score=44.42 Aligned_cols=33 Identities=36% Similarity=0.412 Sum_probs=29.5
Q ss_pred CCCCcEEEEec---cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG---SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG---fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~ 39 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLT 39 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 57899999999 6999999999999999997654
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.69 E-value=1.2 Score=44.35 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=52.0
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceE-eCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKY-YDE 491 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~-i~~ 491 (588)
--.|.+|+|.|.|.||+.+++++...|++|+++. + ++ ++..+++. ++.. +.+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~------~~-----~~~~~~~l---------------Ga~~v~~d 192 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-A------SL-----SQALAAKR---------------GVRHLYRE 192 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-S------SC-----CHHHHHHH---------------TEEEEESS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-C------hh-----hHHHHHHc---------------CCCEEEcC
Confidence 3468999999999999999999999999988876 4 22 12112211 1111 111
Q ss_pred -CCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecC
Q 007820 492 -AKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGS 531 (588)
Q Consensus 492 -~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgA 531 (588)
+++ ...+|+++.|+..... +.+-++++.+.++|.=|.
T Consensus 193 ~~~v-~~g~Dvv~d~~g~~~~--~~~~~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 193 PSQV-TQKYFAIFDAVNSQNA--AALVPSLKANGHIICIQD 230 (315)
T ss_dssp GGGC-CSCEEEEECC---------TTGGGEEEEEEEEEECC
T ss_pred HHHh-CCCccEEEECCCchhH--HHHHHHhcCCCEEEEEeC
Confidence 112 4578999998866544 334444455666665543
No 328
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.59 E-value=4.5 Score=43.36 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=27.4
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.|.+..|.|.|.||..+|..|.+.|..|+ +.|.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~-~~D~ 42 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVL-GVDI 42 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEE-EECS
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 57789999999999999999999999965 4454
No 329
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.44 E-value=0.72 Score=44.92 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=29.0
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
++++++|+|.|. |.+|+++++.|.+.|++|++++-
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEec
Confidence 356899999997 99999999999999999877654
No 330
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=85.36 E-value=1.2 Score=46.41 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=55.2
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCC---CeEEEEEcC--CCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYG---AIPVSVSDA--KGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~G---AKVVaVSDs--~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
|.+|+|.| .|.||+-+.++|.+.. ..++.++.. .|--+.=. + .++ ..+..
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-----------------~--~~~-----~~~~~ 56 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-----------------G--QEI-----EVEDA 56 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-----------------T--EEE-----EEEET
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-----------------C--Cce-----EEEeC
Confidence 57899999 7999999999999874 345555543 22221100 0 000 01111
Q ss_pred CCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 490 ~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
+.+ .+ .+|||+|-|+. ...+.+-+..+.+.+|++|-=++.
T Consensus 57 ~~~-~~-~~~Dvvf~a~~-~~~s~~~a~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 57 ETA-DP-SGLDIALFSAG-SAMSKVQAPRFAAAGVTVIDNSSA 96 (344)
T ss_dssp TTS-CC-TTCSEEEECSC-HHHHHHHHHHHHHTTCEEEECSST
T ss_pred CHH-Hh-ccCCEEEECCC-hHHHHHHHHHHHhCCCEEEECCCc
Confidence 222 22 47899888864 456677777777888887776664
No 331
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.33 E-value=4.5 Score=43.42 Aligned_cols=116 Identities=13% Similarity=0.188 Sum_probs=68.7
Q ss_pred HHHHHHHhCC-CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhh
Q 007820 403 AQLILADMNK-ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSK 481 (588)
Q Consensus 403 i~~~l~~~g~-~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~ 481 (588)
++.+++.++. +-.-++|.|.|.|++|.++|+.|. .+.. |.|.+. |.++...+. +
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~-~~~~-v~iIE~----------d~~r~~~la-------------~ 275 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLE-QTYS-VKLIER----------NLQRAEKLS-------------E 275 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHT-TTSE-EEEEES----------CHHHHHHHH-------------H
T ss_pred HHHHHHhhccccccccEEEEEcchHHHHHHHHHhh-hcCc-eEEEec----------CHHHHHHHH-------------H
Confidence 4555555553 334579999999999999999985 4566 455554 333322121 1
Q ss_pred ccCCceEeCCC----Cccc----cccceeecCCCc---CccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce
Q 007820 482 TYARSKYYDEA----KPWN----ERCDVAFPCASQ---NEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL 549 (588)
Q Consensus 482 ~~p~a~~i~~~----eil~----~dcDILIPcA~~---n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~ 549 (588)
.+|++..+-++ ++|. .++|+++-++-. |.+..--|+++ +++-++-=.|.| +-...+++-||-
T Consensus 276 ~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~---gv~kvIa~vn~~---~~~~l~~~~gid 348 (461)
T 4g65_A 276 ELENTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRM---GAKKVMVLIQRG---AYVDLVQGGVID 348 (461)
T ss_dssp HCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHT---TCSEEEEECSCH---HHHHHHCSSSSC
T ss_pred HCCCceEEeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHc---CCcccccccccc---chhhhhhccccc
Confidence 22333333221 2332 489999988765 44445666766 777666666643 444555566653
No 332
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.28 E-value=1.1 Score=43.51 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=32.2
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+.+.
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 3689999999985 789999999999999998877665
No 333
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=85.24 E-value=1.3 Score=45.92 Aligned_cols=106 Identities=11% Similarity=0.047 Sum_probs=56.5
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccC-CceEeCCCC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYA-RSKYYDEAK 493 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p-~a~~i~~~e 493 (588)
.-++|+|.|.|++|..+|..|.+.|..| .+.|. +.+.+..+.+.......+.++ ..| +....++-+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V-~l~~r----------~~~~~~~i~~~~~~~~~l~g~--~l~~~i~~t~d~~ 94 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKV-RLWSY----------ESDHVDEMQAEGVNNRYLPNY--PFPETLKAYCDLK 94 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCE-EEECS----------CHHHHHHHHHHSSBTTTBTTC--CCCTTEEEESCHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeE-EEEeC----------CHHHHHHHHHcCCCcccCCCC--ccCCCeEEECCHH
Confidence 4478999999999999999999999885 45555 333433333211110011111 011 111111100
Q ss_pred ccccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCC
Q 007820 494 PWNERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMP 534 (588)
Q Consensus 494 il~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P 534 (588)
-.-.+||++|-|.....+ .+.+..|.. ..-.+|+-.+|+-
T Consensus 95 ea~~~aDvVilaVp~~~~-~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 95 ASLEGVTDILIVVPSFAF-HEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp HHHTTCCEEEECCCHHHH-HHHHHHHGGGCCTTCEEEECCCSC
T ss_pred HHHhcCCEEEECCCHHHH-HHHHHHHHHhcCCCCEEEEEeCCC
Confidence 012479999988766533 333333321 1234677778863
No 334
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=85.23 E-value=0.78 Score=45.16 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=27.9
Q ss_pred CCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
++|++|+|.|. |.+|+++++.|.+.|++|+++.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~ 34 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGAD 34 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEE
Confidence 36789999996 9999999999999999977654
No 335
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=85.23 E-value=1 Score=42.51 Aligned_cols=35 Identities=37% Similarity=0.388 Sum_probs=30.5
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVS 38 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3688999999986 8999999999999999976553
No 336
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.13 E-value=0.55 Score=48.52 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=27.6
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
-.+|+|.|.|-+|...|..+...|..| .+.|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V-~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRV-KLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCE-EEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeE-EEEEC
Confidence 458999999999999999999999995 56665
No 337
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=84.93 E-value=0.7 Score=45.97 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=27.9
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+.++++|+|.|. |.+|+++++.|.+.|++|+++.-.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 4678999999996 999999999999999998877543
No 338
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=84.89 E-value=1 Score=42.45 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 38 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITG 38 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 59999999999999999976553
No 339
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=84.84 E-value=1.2 Score=43.00 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=29.8
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLV 37 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5899999999999999997654
No 340
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.81 E-value=1.1 Score=42.67 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=29.9
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
++++++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIAD 44 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 57899999998 59999999999999999976553
No 341
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=84.79 E-value=1.1 Score=42.49 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILID 42 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 368899999998 59999999999999999976553
No 342
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=84.78 E-value=0.83 Score=45.33 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=28.2
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
+++++|+|.| .|-+|+++++.|.+.|++|+++..
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 4789999999 799999999999999999887653
No 343
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.72 E-value=1.7 Score=44.20 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=32.0
Q ss_pred CCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
-.|.+|+|+|. |.||..+++++...|+++|+++++
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRD 201 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecC
Confidence 46899999997 999999999999999999999876
No 344
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.65 E-value=0.76 Score=44.37 Aligned_cols=32 Identities=19% Similarity=0.051 Sum_probs=29.0
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEc
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.++|+|.|.|.+|+++++.|.+.|..|++++-
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEc
Confidence 47999999999999999999999999887764
No 345
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=84.63 E-value=1 Score=44.22 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=30.8
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++++|+|.|. |-+|+++++.|.+.|++|+++..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 468899999996 99999999999999999876653
No 346
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=84.60 E-value=1.1 Score=44.33 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=31.7
Q ss_pred CCCCcEEEEecc-----------------chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-----------------GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-----------------GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|++|+|.|- |..|..+|+.|.+.|++|+.++..
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 589999999987 799999999999999998776543
No 347
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=84.60 E-value=0.96 Score=47.63 Aligned_cols=90 Identities=19% Similarity=0.189 Sum_probs=53.6
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCCC---eEEEEEcC--CCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEe
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYGA---IPVSVSDA--KGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY 489 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~GA---KVVaVSDs--~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i 489 (588)
..+|+|.| .|.||+-+.++|.+.+. .++.++.+ .|--+.-.|. +. ..+.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~-------------------~~-----~~~~~ 57 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQ-------------------DI-----TIEET 57 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTE-------------------EE-----EEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCC-------------------Cc-----eEeeC
Confidence 36899999 79999999999998654 44444432 2222210000 00 01111
Q ss_pred CCCCccccccceeecCCCcCccchhhHHhhhhcCCeEEEecCC
Q 007820 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSN 532 (588)
Q Consensus 490 ~~~eil~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN 532 (588)
+.+. + .+|||+|-|+ ....+.+.+..+.+.+|++|-=+|.
T Consensus 58 ~~~~-~-~~~Dvvf~a~-~~~~s~~~a~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 58 TETA-F-EGVDIALFSA-GSSTSAKYAPYAVKAGVVVVDNTSY 97 (366)
T ss_dssp CTTT-T-TTCSEEEECS-CHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CHHH-h-cCCCEEEECC-ChHhHHHHHHHHHHCCCEEEEcCCc
Confidence 2121 2 3788888876 4556677777777778877766654
No 348
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.57 E-value=1.6 Score=44.19 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=29.0
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC--CCeEEEEE
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY--GAIPVSVS 446 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~--GAKVVaVS 446 (588)
.|.+|+|.|.|.||..+++++... |++|+++.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~ 203 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGIS 203 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 899999999999999999999999 99976654
No 349
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.56 E-value=1.1 Score=42.66 Aligned_cols=34 Identities=29% Similarity=0.358 Sum_probs=30.0
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTA 36 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 57899999998 48999999999999999977554
No 350
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=84.49 E-value=1.3 Score=42.35 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=30.3
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.++++++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58999999999999999976553
No 351
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=84.40 E-value=1.1 Score=44.59 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=30.2
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+|+||+++|.|. +.+|..+|+.|.+.|++|+.+.
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTA 42 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEE
Confidence 3799999999985 6799999999999999976544
No 352
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=84.39 E-value=2.1 Score=46.41 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=27.6
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
-++|+|+|.|++|..+|..|.+.|..| .+.|.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V-~l~D~ 36 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQV-LLYDI 36 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCE-EEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeE-EEEEC
Confidence 358999999999999999999999985 45665
No 353
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=84.29 E-value=1.4 Score=43.80 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=31.0
Q ss_pred CCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 411 NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 411 g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
..+|+||+++|.|. +.+|..+|+.|.+.|++|+.+.
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~ 38 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFA 38 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE
Confidence 45899999999985 7799999999999999976544
No 354
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=84.26 E-value=1.2 Score=43.73 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=30.7
Q ss_pred CCCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEee
Confidence 4689999999997 6899999999999999977653
No 355
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=84.19 E-value=1.2 Score=42.91 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=30.1
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+|+|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 50 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICA 50 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 4799999999985 8999999999999999976543
No 356
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=84.19 E-value=2.3 Score=42.63 Aligned_cols=117 Identities=11% Similarity=0.185 Sum_probs=67.1
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE 491 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~ 491 (588)
.-..|.+|+|.|.|.||..++.++...|++++.++|+ +.++++.+++ .|. ...++.
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~----------~~~k~~~a~~----lGa----------~~~i~~ 212 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI----------SSEKLALAKS----FGA----------MQTFNS 212 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES----------CHHHHHHHHH----TTC----------SEEEET
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec----------hHHHHHHHHH----cCC----------eEEEeC
Confidence 3457899999999999999999999999987777765 2233321221 110 001111
Q ss_pred --CCc------c--ccccceeecCCCcCccchhhHHhhhhcCCeEEEecCCC-C--CCHHHHHHHHHCCceEecc
Q 007820 492 --AKP------W--NERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNM-P--CTPEAVDVLKKANVLIAPA 553 (588)
Q Consensus 492 --~ei------l--~~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~-P--~T~eA~~iL~~rGI~viPD 553 (588)
.+. + ...+|+++.|+... -+-+.+-.++..+-+++.-|.-. + .++-.-..+..+++.+..-
T Consensus 213 ~~~~~~~~~~~~~~~~g~d~v~d~~G~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~ 286 (346)
T 4a2c_A 213 SEMSAPQMQSVLRELRFNQLILETAGVP-QTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGS 286 (346)
T ss_dssp TTSCHHHHHHHHGGGCSSEEEEECSCSH-HHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHhhcccCCccccccccccc-chhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEE
Confidence 010 1 13568888887532 23345555556677777766533 2 2333333344556666543
No 357
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.18 E-value=1.8 Score=43.03 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=30.5
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+|+||+++|.|. +.+|..+|+.|.+.|++|+ +.|.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv-~~~~ 39 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVV-AVEL 39 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEE-EEEC
Confidence 789999999985 6799999999999999964 5665
No 358
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.07 E-value=1.3 Score=42.29 Aligned_cols=34 Identities=29% Similarity=0.307 Sum_probs=29.9
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+|+|.|. |.+|.++|+.|.+.|++|+.+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVA 39 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 4689999999985 899999999999999996654
No 359
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=84.01 E-value=1.3 Score=41.40 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=28.9
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHC--CCeEEEEE
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAY--GAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~--GAKVVaVS 446 (588)
.++++|+|.| .|.+|+++++.|.+. |++|++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5688999998 699999999999999 88977664
No 360
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=83.94 E-value=0.62 Score=49.35 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=32.6
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKG 450 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G 450 (588)
++++++|.|.|.|..|..+|+.|.+.|++ |.++|++-
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~-v~~~D~~~ 38 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVT-PRVMDTRM 38 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCC-CEEEESSS
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCE-EEEEECCC
Confidence 46889999999999999999999999999 56788743
No 361
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.89 E-value=1.3 Score=42.44 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=29.9
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|++++|.| .|-+|.++|+.|.+.|+++|.+.+.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 57899999998 5899999999999999974445554
No 362
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=83.80 E-value=1.2 Score=41.04 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=27.2
Q ss_pred cEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 417 LRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 417 krVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
++|+|.| .|.+|+++++.|.+.|++|++++-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 4799999 599999999999999999877653
No 363
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=83.74 E-value=1.2 Score=43.70 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=29.2
Q ss_pred CCCCcEEEEecc-ch--HHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf-GN--VG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+|+|.|. |+ +|.++|+.|.+.|++|+.+.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~ 59 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTY 59 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEee
Confidence 588999999995 56 99999999999999965443
No 364
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=83.67 E-value=0.61 Score=47.83 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=29.4
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++++|+|+|+|++|..+|..|.+.|..|+ +.|.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~-~~~~ 47 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVT-VGLR 47 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEE-EECC
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEE-EEEC
Confidence 567899999999999999999999998864 5554
No 365
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.59 E-value=2.2 Score=42.74 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=30.2
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
--.|++|+|.|. |.||..+++++...|++|+++.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~ 181 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA 181 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 347899999998 9999999999999999987765
No 366
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=83.49 E-value=1.1 Score=43.22 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=29.8
Q ss_pred CCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+++|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSY 41 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEc
Confidence 578999999996 6999999999999999976543
No 367
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=83.47 E-value=1.4 Score=42.16 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=30.5
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468899999998 58999999999999999976653
No 368
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.45 E-value=0.84 Score=47.71 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=33.5
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAK 449 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~ 449 (588)
.|++++|+|.|.|-+|..+|+.|...|..-++|.|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4678999999999999999999999998888898863
No 369
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=83.44 E-value=1 Score=44.79 Aligned_cols=35 Identities=31% Similarity=0.404 Sum_probs=30.7
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+|+||+++|.|. +.+|..+|+.|.+.|++| .+.|.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~V-vi~~~ 41 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARV-ILNDI 41 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE-EECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE-EEEEC
Confidence 799999999985 779999999999999995 56665
No 370
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.37 E-value=1.3 Score=44.52 Aligned_cols=40 Identities=20% Similarity=0.364 Sum_probs=31.0
Q ss_pred HHhCCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 408 ADMNKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 408 ~~~g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+.+...|+||+++|.|. +.+|..+|+.|.+.|++| .++|.
T Consensus 21 ~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V-~i~~r 61 (273)
T 4fgs_A 21 QSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARV-FITGR 61 (273)
T ss_dssp ----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEE-EEEES
T ss_pred hhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEE-EEEEC
Confidence 34445699999999985 679999999999999995 56665
No 371
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=83.37 E-value=2.7 Score=43.40 Aligned_cols=35 Identities=11% Similarity=0.266 Sum_probs=28.4
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCC-eEEEEEcC
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaVSDs 448 (588)
-.+++|+|.|.|+||+.+|..|...|. .-|.+.|.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 457899999999999999999988775 23566665
No 372
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.32 E-value=1.2 Score=46.01 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=30.7
Q ss_pred CCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++++|+|.|.|.+|..+++.|...|++ |.+.|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga~-V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGAQ-VQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEeC
Confidence 36779999999999999999999999997 556666
No 373
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=83.32 E-value=2.7 Score=42.40 Aligned_cols=105 Identities=12% Similarity=0.172 Sum_probs=60.2
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeCC----
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDE---- 491 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~~---- 491 (588)
.++|+|.|+|.+|+.+++.|.+.|. |+ +.|. ||+ .+. +. + . +...+.+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~-vid~-----~~~-----~~~-~~---~-~-----------~~~~i~gd~~~ 166 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FV-LAED-----ENV-----RKK-VL---R-S-----------GANFVHGDPTR 166 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EE-EESC-----GGG-----HHH-HH---H-T-----------TCEEEESCTTS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EE-EEeC-----Chh-----hhh-HH---h-C-----------CcEEEEeCCCC
Confidence 4589999999999999999999988 54 5566 332 321 11 1 1 1111111
Q ss_pred CCcc----ccccceeecCCCcCccch---hhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCce--Eecc
Q 007820 492 AKPW----NERCDVAFPCASQNEIDQ---SDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVL--IAPA 553 (588)
Q Consensus 492 ~eil----~~dcDILIPcA~~n~It~---enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~--viPD 553 (588)
.+.| -.+||.++-+...++.|. ..|+++ ....++|+..-| ++..+.|++.|+- +.|.
T Consensus 167 ~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~-~~~~~iiar~~~----~~~~~~l~~~G~d~vi~~~ 232 (336)
T 1lnq_A 167 VSDLEKANVRGARAVIVDLESDSETIHCILGIRKI-DESVRIIAEAER----YENIEQLRMAGADQVISPF 232 (336)
T ss_dssp HHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTT-CTTSEEEEECSS----GGGHHHHHHTTCSEEECHH
T ss_pred HHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHH-CCCCeEEEEECC----HHHHHHHHHcCCCEEEChh
Confidence 1122 137888887765443333 333333 234578887643 3445677778863 4454
No 374
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.29 E-value=1.7 Score=47.06 Aligned_cols=31 Identities=10% Similarity=-0.004 Sum_probs=27.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|+|.|.+|..+|..|.+.|..| .+.|.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V-~l~D~ 85 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIET-FLVVR 85 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeE-EEEEC
Confidence 68999999999999999999999984 56676
No 375
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=83.29 E-value=1.3 Score=41.99 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=30.7
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..++||+++|.|. |.+|.++|+.|.+.|++|+.+ |.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~-~r 46 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLL-GR 46 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE-ec
Confidence 3689999999985 899999999999999997654 44
No 376
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=83.25 E-value=1.3 Score=42.01 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=29.8
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++|++++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 57899999998 58999999999999999976553
No 377
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=83.22 E-value=1.2 Score=43.37 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=29.6
Q ss_pred CCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTY 39 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 478999999996 6999999999999999976553
No 378
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=83.20 E-value=0.99 Score=42.42 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=29.2
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCC--eEEEEE
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGA--IPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GA--KVVaVS 446 (588)
+++++|+|.| .|.+|+++++.|.+.|+ +|++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 5689999999 69999999999999999 877654
No 379
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=83.17 E-value=1.4 Score=43.39 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=30.3
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~ 47 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAV 47 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEE
Confidence 3689999999984 8899999999999999976543
No 380
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=83.12 E-value=1.5 Score=42.19 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=29.7
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLF 37 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 5899999999999999997654
No 381
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=83.11 E-value=1.2 Score=42.50 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=30.2
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
++++++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 68899999998 58999999999999999976654
No 382
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=83.05 E-value=1.5 Score=43.13 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.0
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 4789999999984 8899999999999999987665
No 383
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=82.96 E-value=1.2 Score=44.28 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.9
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++++|+|.| .|.+|+++++.|.+.|++|+++.-
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 57789999998 699999999999999999887753
No 384
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=82.96 E-value=1.3 Score=42.42 Aligned_cols=36 Identities=25% Similarity=0.189 Sum_probs=31.4
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++|++|+|.| .|.+|+++|+.|.+.|++|+.+..
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 468899999998 589999999999999999877654
No 385
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=82.95 E-value=1.1 Score=42.33 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=30.2
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++|++|+|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSD 42 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEc
Confidence 3688999999984 9999999999999999976543
No 386
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.94 E-value=1.4 Score=42.66 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=29.5
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++|++++|.| .|.+|.++|+.|.+.|++|+. .|.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~-~~r 39 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFA-GRR 39 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEE-EeC
Confidence 368899999998 578999999999999999654 454
No 387
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.86 E-value=1.5 Score=42.34 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=29.8
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 39 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTC 39 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368899999998 5899999999999999997654
No 388
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=82.84 E-value=1.4 Score=43.23 Aligned_cols=36 Identities=36% Similarity=0.557 Sum_probs=31.1
Q ss_pred CCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 411 NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 411 g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
..+++||+|+|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~ 45 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVS 45 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 35789999999985 7899999999999999977654
No 389
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=82.82 E-value=1.5 Score=41.98 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIA 37 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 5899999999999999997654
No 390
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=82.72 E-value=1.1 Score=42.40 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=29.6
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++|++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~ 38 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHG 38 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEC
Confidence 47899999998 59999999999999999976554
No 391
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=82.65 E-value=1.5 Score=42.91 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=30.4
Q ss_pred CCCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 43 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMI-VGR 43 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 3478999999998 589999999999999999654 454
No 392
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=82.64 E-value=1.5 Score=43.52 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCCCCcEEEEeccc---hHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGSG---KIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGfG---NVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.|.+ .+|+++|+.|.+.|++|+ +.|.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~-~~~r 64 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVA-LTYL 64 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEE-EEES
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEE-EEeC
Confidence 46899999999975 899999999999999965 4554
No 393
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=82.64 E-value=1.6 Score=42.01 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=30.1
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.++++++|+|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIA 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 367899999998 5899999999999999997765
No 394
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=82.61 E-value=2.7 Score=42.17 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=31.0
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.--.|.+|+|.| .|.||..+++++...|++|+++..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 181 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS 181 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 334789999999 899999999999999999876653
No 395
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=82.59 E-value=1.5 Score=42.03 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 38 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD 38 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 57899999998 58999999999999999977654
No 396
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=82.59 E-value=1.5 Score=42.96 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=29.9
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++|++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~ 57 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIAS 57 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 58899999998 58999999999999999976553
No 397
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=82.57 E-value=1.2 Score=45.06 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.0
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCC-eEEEEE
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVS 446 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaVS 446 (588)
.|.+|+|.|.|.||..+++++...|+ +|+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~ 199 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSE 199 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 89999999999999999999999999 876653
No 398
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=82.49 E-value=1.6 Score=41.80 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=30.7
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++|++++|.|. |.+|+++|+.|.+.|++|+.+ |.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~-~r 41 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIV-DR 41 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEE-cC
Confidence 4689999999985 789999999999999996654 44
No 399
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=82.47 E-value=1.6 Score=42.58 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=30.3
Q ss_pred CCCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
..+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~ 51 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVA 51 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3578999999998 5899999999999999997654
No 400
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=82.42 E-value=1.6 Score=42.15 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 42 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIA 42 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 57899999998 5899999999999999997654
No 401
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.42 E-value=2.9 Score=43.05 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.9
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~ 225 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT 225 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 68899999999999999999999999976654
No 402
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.40 E-value=1.5 Score=42.50 Aligned_cols=35 Identities=20% Similarity=0.110 Sum_probs=30.1
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+|+|.|. |-+|.++|+.|.+.|++|+. .|.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~~ 42 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIIL-FDI 42 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EEC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEE-Ecc
Confidence 589999999984 78999999999999999654 444
No 403
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.39 E-value=0.59 Score=50.29 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=28.3
Q ss_pred CcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 416 GLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 416 GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.++|+|.|+|.||+++|+.|.+.|..| .|.|.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v-~vId~ 34 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDI-TIVDK 34 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEE-EEEES
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCE-EEEEC
Confidence 579999999999999999999999885 56676
No 404
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.36 E-value=1.4 Score=40.74 Aligned_cols=30 Identities=17% Similarity=0.302 Sum_probs=26.9
Q ss_pred cEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
++|+|.|. |.+|+++++.|.+.|++|++++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVV 31 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 47999996 9999999999999999987775
No 405
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.29 E-value=3.1 Score=41.98 Aligned_cols=108 Identities=12% Similarity=0.193 Sum_probs=57.2
Q ss_pred CCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChh--hhhhccCCceEe
Q 007820 412 KELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLR--DYSKTYARSKYY 489 (588)
Q Consensus 412 ~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~--~y~~~~p~a~~i 489 (588)
.+...++|+|.|.|++|..+|..|.+.|..|..+ . +.+.++.+.+ ..-.+. ++.. .......
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~--~----------~~~~~~~i~~---~g~~~~~~~~~~-~~~~~~~ 78 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI--A----------RPQHVQAIEA---TGLRLETQSFDE-QVKVSAS 78 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHTTCEEEEE--C----------CHHHHHHHHH---HCEEEECSSCEE-EECCEEE
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE--E----------cHhHHHHHHh---CCeEEEcCCCcE-EEeeeee
Confidence 3566789999999999999999999999987554 3 1223322222 111111 0000 0011111
Q ss_pred CCCCccccccceeecCCCcCccchhhHHhhhh--cCCeEEEecCCCCCCH
Q 007820 490 DEAKPWNERCDVAFPCASQNEIDQSDAINLVN--SGCRILVEGSNMPCTP 537 (588)
Q Consensus 490 ~~~eil~~dcDILIPcA~~n~It~enA~~l~~--~~akiVvEgAN~P~T~ 537 (588)
++.+. ..+||++|-|.....+ .+.+..|.. ..-.+|+-..|+-...
T Consensus 79 ~~~~~-~~~~D~vilavk~~~~-~~~l~~l~~~l~~~~~iv~~~nGi~~~ 126 (318)
T 3hwr_A 79 SDPSA-VQGADLVLFCVKSTDT-QSAALAMKPALAKSALVLSLQNGVENA 126 (318)
T ss_dssp SCGGG-GTTCSEEEECCCGGGH-HHHHHHHTTTSCTTCEEEEECSSSSHH
T ss_pred CCHHH-cCCCCEEEEEcccccH-HHHHHHHHHhcCCCCEEEEeCCCCCcH
Confidence 22111 2489999998877644 344444421 1224677778876543
No 406
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=82.27 E-value=2.6 Score=42.94 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=29.4
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHC-CCeEEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVS 446 (588)
-.|.+|+|+|.|.||..++.++... |++|+++.
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~ 218 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 218 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEe
Confidence 3688999999999999999999999 99977665
No 407
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=82.26 E-value=1.5 Score=42.21 Aligned_cols=36 Identities=33% Similarity=0.475 Sum_probs=30.6
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.|. |-+|.++|+.|.+.|++|+ +.|.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~-~~~r 38 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVI-VSDI 38 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 3689999999985 8899999999999999965 4554
No 408
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=82.25 E-value=1.1 Score=44.17 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=26.9
Q ss_pred hCCCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 410 MNKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 410 ~g~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
...+++||+++|.| .|.+|.++|+.|.+.|++|+.+ |.
T Consensus 27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-~r 65 (281)
T 4dry_A 27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVIT-GR 65 (281)
T ss_dssp -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-EC
Confidence 34578999999998 5889999999999999996654 44
No 409
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=82.23 E-value=1.7 Score=42.07 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++|++++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG 37 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 357899999998 5899999999999999997654
No 410
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=82.21 E-value=2.6 Score=42.63 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=29.0
Q ss_pred CCcEEEEe-ccchHHHHHHHHHHHCCCeEEEEE
Q 007820 415 KGLRCVVS-GSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 415 ~GkrVaIQ-GfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.|.+|+|. |.|.||..+++++...|++|+++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~ 182 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA 182 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 68999999 799999999999999999987664
No 411
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=82.17 E-value=1.7 Score=42.07 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=29.6
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 37 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALL 37 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368899999998 5899999999999999997654
No 412
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.17 E-value=1.4 Score=42.73 Aligned_cols=31 Identities=19% Similarity=0.120 Sum_probs=26.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V-~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEV-QGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCE-EEEEc
Confidence 47999999999999999999999985 45565
No 413
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=82.14 E-value=1.4 Score=42.48 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=30.2
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.|. |.+|.++|+.|.+.|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVI-TGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EeC
Confidence 588999999985 88999999999999999654 444
No 414
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=82.13 E-value=1.5 Score=42.46 Aligned_cols=34 Identities=26% Similarity=0.208 Sum_probs=29.5
Q ss_pred CCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTY 42 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEc
Confidence 378999999996 6999999999999999976553
No 415
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.12 E-value=1.4 Score=43.08 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=29.7
Q ss_pred CCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTY 54 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEe
Confidence 378999999996 6999999999999999976553
No 416
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=82.10 E-value=1.5 Score=42.26 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=29.8
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 44 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVS 44 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 468899999998 5899999999999999997654
No 417
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=82.04 E-value=1.4 Score=42.93 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=29.6
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++|++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 63 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 47899999997 59999999999999999976553
No 418
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.02 E-value=1.6 Score=42.57 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=30.3
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~-~r 42 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAIC-DR 42 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEE-eC
Confidence 68999999998 5889999999999999996544 44
No 419
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=82.02 E-value=1.6 Score=42.94 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=30.4
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+ |.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~-~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVA-AR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE-eC
Confidence 68999999998 5899999999999999996654 44
No 420
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=82.00 E-value=2.9 Score=42.10 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=29.9
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~ 197 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD 197 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 468899999999999999999999999987764
No 421
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=81.99 E-value=2.3 Score=43.13 Aligned_cols=34 Identities=12% Similarity=0.012 Sum_probs=30.5
Q ss_pred CC-cEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 415 KG-LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 415 ~G-krVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.| .+|+|.|. |.||+.+++++...|++||+++++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~ 201 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRD 201 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 57 89999997 999999999999999999888743
No 422
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.98 E-value=1.5 Score=42.46 Aligned_cols=35 Identities=34% Similarity=0.355 Sum_probs=30.3
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|++|+|.| .|-+|.++|+.|.+.|++|+.+ +.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~-~r 61 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLT-AR 61 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE-EC
Confidence 58899999998 5899999999999999997654 44
No 423
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.98 E-value=1.6 Score=41.97 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=29.5
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 58999999999999999976543
No 424
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=81.96 E-value=1.7 Score=42.47 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=30.2
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 468999999998 58899999999999999976543
No 425
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=81.92 E-value=1.5 Score=42.19 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=29.8
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.|. |-+|.++|+.|.+.|++|+.+
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~ 39 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGT 39 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3689999999984 889999999999999997654
No 426
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=81.90 E-value=1.4 Score=42.45 Aligned_cols=35 Identities=31% Similarity=0.368 Sum_probs=29.9
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.|. |.+|.++|+.|.+.|++|+. .+.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r 36 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVL-NGF 36 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999985 89999999999999999765 444
No 427
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.85 E-value=1.7 Score=42.18 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=30.6
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.++++++|+|.| .|-+|.++|+.|.+.|++|+.+.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEE
Confidence 578999999998 58999999999999999976543
No 428
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=81.83 E-value=1.7 Score=42.32 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAV 43 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEE
Confidence 468999999998 4889999999999999997654
No 429
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=81.82 E-value=1.7 Score=41.81 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=29.8
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~ 38 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLD 38 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3689999999985 8999999999999999976543
No 430
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=81.82 E-value=2.5 Score=43.35 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=29.9
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|.+|+|.| .|.||..+++++...|++|+++.
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~ 215 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC 215 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe
Confidence 4689999999 79999999999999999988765
No 431
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=81.81 E-value=1.7 Score=42.14 Aligned_cols=35 Identities=17% Similarity=0.355 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+ |.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~-~r 40 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLT-GR 40 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-eC
Confidence 58999999998 4889999999999999997654 44
No 432
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=81.73 E-value=1.7 Score=42.46 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=30.9
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+. .|.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 43 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVL-ADL 43 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EEC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EcC
Confidence 4789999999985 88999999999999999654 454
No 433
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.68 E-value=1.2 Score=51.00 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=27.8
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|.|-+|...|..+...|..| .+.|.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V-~l~D~ 347 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISV-VAVES 347 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEE-EEECS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCch-hcccc
Confidence 59999999999999999999999995 56676
No 434
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.68 E-value=2.9 Score=42.53 Aligned_cols=32 Identities=25% Similarity=0.161 Sum_probs=29.1
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEE
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.|.+|+|.|.|.||..+++++...|++|+++.
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~ 210 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVIS 210 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 68899999999999999999999999977665
No 435
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=81.67 E-value=1.6 Score=43.26 Aligned_cols=35 Identities=23% Similarity=0.194 Sum_probs=29.9
Q ss_pred CCCCcEEEEecc-ch--HHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GK--IAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GN--VG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.|. |. +|.++|+.|.+.|++|+. .+.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~-~~r 65 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAF-TYQ 65 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEE-EEC
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE-EcC
Confidence 589999999996 56 999999999999999654 444
No 436
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=81.66 E-value=1.8 Score=41.80 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=29.3
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.|. |-+|+++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLA 35 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 578999999985 899999999999999997654
No 437
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=81.60 E-value=1.8 Score=43.69 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=29.2
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCC-eEEEEE
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVS 446 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaVS 446 (588)
.|.+|+|.|.|.||..+++++...|+ +|+++.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~ 196 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSD 196 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 89999999999999999999999999 877654
No 438
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=81.60 E-value=1.7 Score=41.79 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=30.5
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..++||+++|.|. |.+|.++|+.|.+.|++|+. .|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 44 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVIL-LGR 44 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 3589999999985 88999999999999999664 444
No 439
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=81.57 E-value=1.5 Score=42.92 Aligned_cols=30 Identities=33% Similarity=0.370 Sum_probs=27.7
Q ss_pred cEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 417 LRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 417 krVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
+||+|.|. |-||+++++.|.+.|..|++++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 58999996 9999999999999999998886
No 440
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=81.55 E-value=1.5 Score=42.05 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=30.4
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.++++++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 45 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA 45 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 368899999998 58999999999999999976553
No 441
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.54 E-value=1.3 Score=42.29 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=27.1
Q ss_pred CCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..++|+|.|+|++|+.+|+.|.+.|..|+ +.|.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~-~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVV-VGSR 59 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEE-EEES
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 34689999999999999999999998854 5555
No 442
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.54 E-value=1.7 Score=42.43 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~ 45 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIAC 45 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 368999999998 5889999999999999997655
No 443
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=81.53 E-value=1.7 Score=41.98 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=29.4
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 43 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLV 43 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 58899999998 5899999999999999997654
No 444
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.51 E-value=1.7 Score=43.80 Aligned_cols=33 Identities=15% Similarity=0.381 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++|++|+|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~ 38 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIA 38 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEE
Confidence 67899999998 4899999999999999996654
No 445
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=81.50 E-value=1.5 Score=43.75 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=30.6
Q ss_pred CCCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGT 42 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEE
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEe
Confidence 4689999999995 8999999999999999976553
No 446
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=81.50 E-value=1.9 Score=42.25 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.|. |-+|.++|+.|.+.|++|+.+...
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999985 789999999999999997665443
No 447
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=81.48 E-value=1.5 Score=41.83 Aligned_cols=35 Identities=31% Similarity=0.257 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.-
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36899999998 589999999999999999876543
No 448
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=81.47 E-value=1.8 Score=42.54 Aligned_cols=33 Identities=18% Similarity=0.418 Sum_probs=29.3
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~ 35 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVL 35 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEE
Confidence 57899999998 5889999999999999997654
No 449
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.43 E-value=1.8 Score=41.83 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=30.1
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|-+|+++|+.|.+.|++|+. .|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r 40 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAI-ADI 40 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 57899999998 589999999999999999654 444
No 450
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=81.42 E-value=1.5 Score=43.62 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=28.9
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++++|+|.|. |.+|+++++.|.+.|++|+++.-
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 467889999996 99999999999999999877653
No 451
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=81.40 E-value=2.5 Score=42.39 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=30.5
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
--.|.+|+|.| .|.||..+++++...|++|+++..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 173 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS 173 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34689999999 899999999999999999877653
No 452
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=81.38 E-value=1.7 Score=43.00 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~ 77 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIA 77 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 4689999999985 889999999999999997544
No 453
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.38 E-value=1.5 Score=42.52 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=30.3
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|-+|.++|+.|.+.|++|+.+ |.
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r 42 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVA-GR 42 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eC
Confidence 68999999998 5899999999999999997644 44
No 454
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=81.37 E-value=2.8 Score=41.94 Aligned_cols=108 Identities=9% Similarity=0.108 Sum_probs=63.2
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCce-EeC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSK-YYD 490 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~-~i~ 490 (588)
--.|.+|+|.| .|.||..++.++...|++|++++.. +++..+++. | +. .++
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~------------~~~~~~~~l----G-----------a~~~i~ 202 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK------------RNHAFLKAL----G-----------AEQCIN 202 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH------------HHHHHHHHH----T-----------CSEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc------------chHHHHHHc----C-----------CCEEEe
Confidence 34789999997 9999999999999999998877532 122212211 1 11 111
Q ss_pred C--CC-ccc--cccceeecCCCcCccchhhHHhhhhcCCeEEEecCCCCCCHHHHHHHHHCCceEe
Q 007820 491 E--AK-PWN--ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIA 551 (588)
Q Consensus 491 ~--~e-il~--~dcDILIPcA~~n~It~enA~~l~~~~akiVvEgAN~P~T~eA~~iL~~rGI~vi 551 (588)
. .+ +.+ ..+|+++.|+..... +.+-+++..+-++|.=|.-. .+.....+..+++.+.
T Consensus 203 ~~~~~~~~~~~~g~D~v~d~~g~~~~--~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~~~~~~~ 264 (321)
T 3tqh_A 203 YHEEDFLLAISTPVDAVIDLVGGDVG--IQSIDCLKETGCIVSVPTIT--AGRVIEVAKQKHRRAF 264 (321)
T ss_dssp TTTSCHHHHCCSCEEEEEESSCHHHH--HHHGGGEEEEEEEEECCSTT--HHHHHHHHHHTTCEEE
T ss_pred CCCcchhhhhccCCCEEEECCCcHHH--HHHHHhccCCCEEEEeCCCC--chhhhhhhhhcceEEE
Confidence 1 11 111 368999999875544 44555556667777654211 1112223456666655
No 455
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=81.29 E-value=1.6 Score=42.77 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=28.5
Q ss_pred CCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 411 NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 411 g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
+.++++|+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 45688999999985 8899999999999999976554
No 456
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=81.28 E-value=1.3 Score=42.21 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.0
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++|++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 38 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY 38 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEc
Confidence 57899999998 69999999999999999977654
No 457
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=81.28 E-value=1.4 Score=43.03 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=27.9
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
|++|+|.| .|.+|+++++.|.+.|++|+++.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 68999999 69999999999999999987665
No 458
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=81.28 E-value=1.4 Score=43.89 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=30.7
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++++|+|.| .|-+|+++++.|.+.|.+|+++.-
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 57 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDN 57 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 35789999999 599999999999999999877754
No 459
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=81.25 E-value=1.7 Score=42.99 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=28.8
Q ss_pred CcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 416 GLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 416 GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
+++|+|.| .|-+|+++++.|.+.|++|+++..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 78999999 699999999999999999887654
No 460
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=81.24 E-value=1.4 Score=44.10 Aligned_cols=34 Identities=26% Similarity=0.186 Sum_probs=29.9
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEc
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSD 447 (588)
+++++|+|.| .|-+|+++++.|.+.|++|+++.-
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeC
Confidence 4688999999 599999999999999999877653
No 461
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=81.22 E-value=1.5 Score=42.74 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=30.1
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|++++|.|. |.+|.++|+.|.+.|++|+. .|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~-~~r 62 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVI-ADL 62 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 689999999985 88999999999999999764 444
No 462
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=81.20 E-value=1.7 Score=41.59 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=29.2
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.|. |.+|+++|+.|.+.|++|+.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 36 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIAT 36 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 478999999985 899999999999999997654
No 463
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.20 E-value=1.8 Score=41.48 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=29.9
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+ +.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~-~r 39 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIA-AR 39 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE-EC
Confidence 57899999998 5899999999999999997654 44
No 464
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=81.14 E-value=1.5 Score=43.93 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=27.9
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|+|.|-+|..+|..|.+.|.+ |.|.|.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~-v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK-VTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC-EEEEec
Confidence 5899999999999999999999999 467764
No 465
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.09 E-value=1.6 Score=42.67 Aligned_cols=92 Identities=13% Similarity=0.021 Sum_probs=53.2
Q ss_pred cEEEEeccchHHHHHHHHHHHCCC--eEEEEEcCCCeeeCCCCCCHHHHHHHHHHhhccCChhhhhhccCCceEeC-CCC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGA--IPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYD-EAK 493 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GA--KVVaVSDs~G~IydpdGLDie~L~~L~~~k~~~gsL~~y~~~~p~a~~i~-~~e 493 (588)
++|.|.|+|++|..+|+.|.+.|. .| .+.|. +.+.+..+. ..|... ...+ .++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V-~~~d~----------~~~~~~~~~----~~g~~~---------~~~~~~~~ 57 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKI-YGYDI----------NPESISKAV----DLGIID---------EGTTSIAK 57 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEE-EEECS----------CHHHHHHHH----HTTSCS---------EEESCGGG
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEE-EEEeC----------CHHHHHHHH----HCCCcc---------cccCCHHH
Confidence 489999999999999999999997 64 45554 233332111 111110 0111 112
Q ss_pred cccc-ccceeecCCCcCccchhhHHhhh---hcCCeEEEecCCCCC
Q 007820 494 PWNE-RCDVAFPCASQNEIDQSDAINLV---NSGCRILVEGSNMPC 535 (588)
Q Consensus 494 il~~-dcDILIPcA~~n~It~enA~~l~---~~~akiVvEgAN~P~ 535 (588)
.+ . +||++|-|.....+ .+-+..+. +.+ .+|+..+|...
T Consensus 58 ~~-~~~aDvVilavp~~~~-~~v~~~l~~~l~~~-~iv~~~~~~~~ 100 (281)
T 2g5c_A 58 VE-DFSPDFVMLSSPVRTF-REIAKKLSYILSED-ATVTDQGSVKG 100 (281)
T ss_dssp GG-GTCCSEEEECSCHHHH-HHHHHHHHHHSCTT-CEEEECCSCCT
T ss_pred Hh-cCCCCEEEEcCCHHHH-HHHHHHHHhhCCCC-cEEEECCCCcH
Confidence 22 3 79999998876543 23333332 234 47777777764
No 466
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.08 E-value=2.8 Score=42.85 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=29.4
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|.+|+|.| .|.||..+++++...|++|+++.
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~ 195 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTC 195 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEE
Confidence 4689999999 79999999999999999977654
No 467
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=81.07 E-value=3 Score=41.28 Aligned_cols=33 Identities=15% Similarity=0.250 Sum_probs=29.3
Q ss_pred CCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|.+|+|.|. |.||..+++.+...|++|+++.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~ 157 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 157 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 36899999998 9999999999999999977654
No 468
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=81.06 E-value=2 Score=42.50 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=29.5
Q ss_pred CCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++||+++|.|. +-+|..+|+.|.+.|++|+ +.|.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv-~~~~ 43 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVV-ALGL 43 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEE-EEES
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 58999999985 6799999999999999964 6665
No 469
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.05 E-value=1.9 Score=41.36 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=29.2
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 35 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVAC 35 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999997655
No 470
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.04 E-value=3 Score=42.61 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=28.2
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCC-eEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSV 445 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaV 445 (588)
-.|.+|+|.|.|.||..+++++...|+ +|+++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~ 226 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAI 226 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Confidence 468899999999999999999999999 66554
No 471
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=81.02 E-value=1.6 Score=41.45 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=30.9
Q ss_pred CCCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 411 NKELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 411 g~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
..++++++|+|.| .|.+|.++|+.|.+.|++|+.+.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISG 45 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEc
Confidence 3578999999998 58999999999999999976543
No 472
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=81.00 E-value=1.8 Score=43.24 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=30.5
Q ss_pred CCCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 4688999999994 8999999999999999976553
No 473
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=80.99 E-value=1.7 Score=42.14 Aligned_cols=37 Identities=30% Similarity=0.399 Sum_probs=31.3
Q ss_pred CCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 411 NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 411 g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..+++||+++|.|. |-+|.++|+.|.+.|++|+. .|.
T Consensus 5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~-~~r 42 (267)
T 3t4x_A 5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLI-NGR 42 (267)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 45789999999985 88999999999999999664 444
No 474
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=80.94 E-value=1.9 Score=41.97 Aligned_cols=36 Identities=31% Similarity=0.243 Sum_probs=31.1
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEc
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSD 447 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSD 447 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+..
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 4789999999985 78999999999999999876543
No 475
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=80.89 E-value=1.2 Score=48.42 Aligned_cols=56 Identities=18% Similarity=0.113 Sum_probs=36.4
Q ss_pred CCccHHHHHHHHHHHHHHh---------CCCCCCcEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 392 TEATGYGLVFFAQLILADM---------NKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 392 ~eATG~GV~~~i~~~l~~~---------g~~l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..-.+.|.+.+++.+++.. ..+++|++++|.|.|.+|..+|..|.+.|++ |.|.+.
T Consensus 331 ~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~-V~i~~R 395 (523)
T 2o7s_A 331 YNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAK-VVIANR 395 (523)
T ss_dssp ECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred EcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEEC
Confidence 3445667777777664321 1368899999999999999999999999997 456665
No 476
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=80.85 E-value=1.9 Score=41.83 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=30.7
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.| .|-+|.++|+.|.+.|++|+. .|.
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~-~~r 40 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAF-CAR 40 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-EeC
Confidence 478999999998 588999999999999999654 454
No 477
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=80.85 E-value=1.6 Score=42.49 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=29.9
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 39 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS 39 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 47899999998 58999999999999999977654
No 478
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=80.81 E-value=2.8 Score=42.06 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=29.1
Q ss_pred CCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|++|+|.|. |.||+.+++.+...|++|+++.
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~ 187 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA 187 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 46899999996 9999999999999999976654
No 479
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=80.81 E-value=1.6 Score=42.41 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=30.2
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.| .|.+|.++|+.|.+.|++|+. .|.
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~-~~r 52 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVL-SGR 52 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 68999999998 489999999999999999654 444
No 480
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=80.78 E-value=1.9 Score=37.56 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=30.4
Q ss_pred CCcEEEEeccchHHHHHHHHHHHC-CCeEEEEEcC
Q 007820 415 KGLRCVVSGSGKIAMHVLEKLIAY-GAIPVSVSDA 448 (588)
Q Consensus 415 ~GkrVaIQGfGNVG~~aAe~L~e~-GAKVVaVSDs 448 (588)
+.++++|.|.|..|..+++.|.+. |.+|+++.|.
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 467999999999999999999875 8999999986
No 481
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=80.75 E-value=1.8 Score=43.91 Aligned_cols=32 Identities=31% Similarity=0.418 Sum_probs=28.4
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCCeEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GAKVVaV 445 (588)
-.|.+|+|.|.|.||..+++++...|++|+++
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~ 198 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCT 198 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEE
Confidence 36889999999999999999999999996554
No 482
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=80.71 E-value=2 Score=42.31 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=30.0
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
.+++||+++|.| .|-+|.++|+.|.+.|++|+.+
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~ 57 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA 57 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 578999999998 5889999999999999997644
No 483
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=80.69 E-value=1.9 Score=42.29 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=29.8
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
.++|++|+|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS 49 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 68899999998 58999999999999999976553
No 484
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.69 E-value=1.6 Score=42.07 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=29.6
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.|. |.+|.++|+.|.+.|++|+.+ +.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~-~r 39 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLI-AR 39 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEE-ES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE-EC
Confidence 3678999999985 899999999999999997654 44
No 485
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.64 E-value=1.7 Score=43.35 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=27.4
Q ss_pred cEEEEeccchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 417 LRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 417 krVaIQGfGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
++|+|.|.|++|..+|..|.+.|..| .+.|.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V-~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTV-VLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE-EEEEC
Confidence 58999999999999999999999985 46665
No 486
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.62 E-value=2.1 Score=41.54 Aligned_cols=36 Identities=19% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
..++||+++|.|. |.+|.++|+.|.+.|++|+.+ |.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r 43 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLA-AR 43 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEE-eC
Confidence 4689999999985 789999999999999997654 44
No 487
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=80.60 E-value=1.9 Score=42.16 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=29.1
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 52 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVC 52 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999997654
No 488
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=80.60 E-value=3.2 Score=41.52 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=29.2
Q ss_pred CCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
-.|++|+|.|. |.+|..+++.+...|++|+++.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~ 177 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA 177 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEe
Confidence 46899999997 9999999999999999977653
No 489
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=80.45 E-value=1.8 Score=41.70 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=29.0
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|.++|+.|.+.|++|+.+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~ 35 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYIT 35 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEE
Confidence 47899999998 5899999999999999997654
No 490
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=80.43 E-value=1.7 Score=42.75 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=30.2
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.|. |.+|.++|+.|.+.|++|+. .|.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~-~~r 65 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVIL-HGV 65 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEE-EcC
Confidence 689999999984 88999999999999999654 454
No 491
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=80.43 E-value=1.6 Score=42.99 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=28.7
Q ss_pred CCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEE
Q 007820 413 ELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSV 445 (588)
Q Consensus 413 ~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaV 445 (588)
+++||+++|.| .|.+|+++|+.|.+.|++|+.+
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~ 59 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCA 59 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 68999999998 5889999999999999997644
No 492
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=80.40 E-value=2 Score=42.80 Aligned_cols=35 Identities=29% Similarity=0.367 Sum_probs=30.1
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++|++|+|.|. |.+|.++|+.|.+.|++|+. .|.
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~-~~r 63 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVL-SDV 63 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE-EES
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE-EEC
Confidence 589999999984 88999999999999999664 444
No 493
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=80.39 E-value=2 Score=41.86 Aligned_cols=36 Identities=31% Similarity=0.416 Sum_probs=30.7
Q ss_pred CCCCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEEcC
Q 007820 412 KELKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 412 ~~l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
.+++||+++|.| .|.+|+++|+.|.+.|++|+.+ |.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~-~r 53 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTC-SR 53 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEE-ES
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEE-eC
Confidence 468999999998 5899999999999999997654 44
No 494
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=80.35 E-value=2 Score=41.17 Aligned_cols=35 Identities=23% Similarity=0.157 Sum_probs=30.4
Q ss_pred CCCCCcEEEEecc---chHHHHHHHHHHHCCCeEEEEE
Q 007820 412 KELKGLRCVVSGS---GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 412 ~~l~GkrVaIQGf---GNVG~~aAe~L~e~GAKVVaVS 446 (588)
..+++|+|+|.|. |.+|.++|+.|.+.|++|+.+.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~ 47 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTY 47 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEe
Confidence 5789999999995 6899999999999999976543
No 495
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=80.34 E-value=1.9 Score=42.30 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=30.7
Q ss_pred CCCCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 411 NKELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 411 g~~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
..+++||+++|.|. |-+|.++|+.|.+.|++|+.+.
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34689999999984 8899999999999999976543
No 496
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.31 E-value=1.6 Score=41.34 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=28.2
Q ss_pred CCCcEEEEec-cchHHHHHHHHHHHCCCeEEEEE
Q 007820 414 LKGLRCVVSG-SGKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQG-fGNVG~~aAe~L~e~GAKVVaVS 446 (588)
++||+++|.| .|.+|+++|+.|.+.|++|+.+.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~ 34 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNID 34 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4688999998 58999999999999999977654
No 497
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=80.28 E-value=1.4 Score=43.02 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=28.0
Q ss_pred CcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 416 GLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 416 GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
+++|+|.|. |.+|+++++.|.+.|++|+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEc
Confidence 689999996 9999999999999999987765
No 498
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=80.25 E-value=1.6 Score=42.35 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=28.5
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEE
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVS 446 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVS 446 (588)
++++|+|+|.|. |.+|+++|+.|.+.|++|+.+.
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 457899999984 8999999999999999987654
No 499
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=80.19 E-value=1.6 Score=42.00 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=29.9
Q ss_pred CCCCcEEEEecc-chHHHHHHHHHHHCCCeEEEEEcC
Q 007820 413 ELKGLRCVVSGS-GKIAMHVLEKLIAYGAIPVSVSDA 448 (588)
Q Consensus 413 ~l~GkrVaIQGf-GNVG~~aAe~L~e~GAKVVaVSDs 448 (588)
+++||+++|.|. |.+|+++|+.|.+.|++|+. .|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~-~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAF-SDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE-EeC
Confidence 578999999984 89999999999999999654 444
No 500
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.18 E-value=1.9 Score=43.84 Aligned_cols=33 Identities=33% Similarity=0.369 Sum_probs=28.8
Q ss_pred CCCcEEEEeccchHHHHHHHHHHHCCC-eEEEEE
Q 007820 414 LKGLRCVVSGSGKIAMHVLEKLIAYGA-IPVSVS 446 (588)
Q Consensus 414 l~GkrVaIQGfGNVG~~aAe~L~e~GA-KVVaVS 446 (588)
-.|.+|+|.|.|.||..+++++...|+ +|+++.
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 203 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTD 203 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 368899999999999999999999999 766654
Done!