BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007829
(588 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana
GN=RH35 PE=2 SV=1
Length = 591
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/588 (87%), Positives = 555/588 (94%)
Query: 1 MMEEEDDYVEYVPIAKRRAMEAQKILQRKGQASTLEDELEKSKLAEVKPSLLVKASQLKR 60
+MEE D Y+EYV +A+RRA+ AQKILQRKG+AS LE+E +K KLAE KPSLLV+A+QLKR
Sbjct: 4 IMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQLKR 63
Query: 61 DQPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKK 120
D PE+S TEQI+ QEKEM+E+LSD+KTLMSVRELAKGITYT+PLLTGWKPPL IR+MS K
Sbjct: 64 DVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMSSK 123
Query: 121 ACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSG 180
DLIRKQWHIIV+G+DIPPPIKNFKDM+FP P+L LK KGIVQPTPIQVQGLPV+L+G
Sbjct: 124 QRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAG 183
Query: 181 RDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVE 240
RDMIGIAFTGSGKTLVFVLPMIMIA+ EEMMMPI GEGP LIVCPSRELARQTYEVVE
Sbjct: 184 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVE 243
Query: 241 QFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNC 300
QF+ P+ +AGYP LR+LLCIGG+DMRSQLEVVKRGVHIVVATPGRLKDMLAKKKM+LD C
Sbjct: 244 QFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDAC 303
Query: 301 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNV 360
RYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTVNV
Sbjct: 304 RYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNV 363
Query: 361 GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVE 420
GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVE
Sbjct: 364 GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVE 423
Query: 421 AVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 480
AVA+HGGKDQE+REYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH
Sbjct: 424 AVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
Query: 481 RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITN 540
RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ + I N
Sbjct: 484 RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIAN 543
Query: 541 ASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 588
ASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 544 ASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591
>sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp.
japonica GN=Os02g0150100 PE=2 SV=2
Length = 627
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/600 (76%), Positives = 522/600 (87%), Gaps = 32/600 (5%)
Query: 3 EEEDDYVEYVPIAKRRAMEAQKILQ----------------------------RKGQAST 34
++ED+Y EY+P+AKRRAMEA ++ + + A
Sbjct: 18 DDEDNYEEYIPVAKRRAMEADRLRRLRLSKPAPPSSSAAEAASDLPPPPPPPPNQPSAGG 77
Query: 35 LEDELEKSKLAEVKPSLLVKASQLKRDQPEISPTEQIVQQEKEMIENLSDRKTLMSVREL 94
LE A KPSLLVKA+QLKR PE++ TEQ++ QEKEMIE+LSDRKTLMSVREL
Sbjct: 78 GGGGLE----ASAKPSLLVKATQLKRAAPEVTHTEQLIMQEKEMIEHLSDRKTLMSVREL 133
Query: 95 AKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPI 154
AKGITY+DPL TGWKPPL +RRM + D +R++WHI+VDG+D+PPP ++F+D+R PEP+
Sbjct: 134 AKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPM 193
Query: 155 LKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPI 214
L+KL+ KGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLP+IM+A+ EEMMMPI
Sbjct: 194 LRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPI 253
Query: 215 VPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKR 274
VPGEGPF +I+CPSRELA+QTY+V+EQFL P+++AGYP++R LLCIGGVDMR+QL+VVK+
Sbjct: 254 VPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKK 313
Query: 275 GVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL 334
GVHIVVATPGRLKD+LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL
Sbjct: 314 GVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTL 373
Query: 335 LFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTP 394
LFSATMP KIQNFA+SALVKPV VNVGRAGAANLDVIQEVEYVK++A+I+YLLECLQKTP
Sbjct: 374 LFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTP 433
Query: 395 PPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVA 454
PPVL+FCENKADVD IHEYLLLKGVEAVA+HGGKDQEERE AI FK GKKDVLVATDVA
Sbjct: 434 PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVA 493
Query: 455 SKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLL 514
SKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLL
Sbjct: 494 SKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLL 553
Query: 515 QEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASS 574
+EAKQRIPPVLAELNDP+ED + + SGVKGCAYCGGLGHR+ DCPKLEHQKSMAIA S
Sbjct: 554 KEAKQRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGHRVTDCPKLEHQKSMAIAGS 613
>sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp.
japonica GN=Os06g0697200 PE=3 SV=1
Length = 619
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/599 (72%), Positives = 512/599 (85%), Gaps = 15/599 (2%)
Query: 4 EEDDYVEYVPIAKRRAMEAQKILQRKGQASTLEDELEKSKL-------------AEVKPS 50
+E+DY EYVP+AKRRAMEA++ L+R + T + VK S
Sbjct: 22 DEEDYEEYVPVAKRRAMEAER-LRRATKPPTTNAVAVAAPPPPPRSTSSPAVGEVAVKTS 80
Query: 51 LLVKASQLKRDQPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKP 110
LLVKA++LKR+ PE++P E+++QQE+EMIE+LSDRK LM V E+AKGI+Y++P+ TGW+P
Sbjct: 81 LLVKATKLKREAPEVTPAERLLQQEREMIEHLSDRKALMPVGEIAKGISYSEPITTGWRP 140
Query: 111 PLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQ 170
PL +RRM + D +R+ WHI+VDG+D+PPP ++F D+R PEPIL+ L+ KGI +PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 171 VQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRE 230
VQGLPV LSGRDMIGIAFTGSGKTLVFVLP+IM A+ EE++MPIVPGEGPF LIVCPSRE
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRE 260
Query: 231 LARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDML 290
LARQT+EV+E FL P+ +AGYP++R LLCIGGVDMR+Q+EVVK+GVHIVVATPGRLKD+L
Sbjct: 261 LARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIVVATPGRLKDLL 320
Query: 291 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 350
+KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+S
Sbjct: 321 SKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKS 380
Query: 351 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 410
ALVKP+ VNVGRAGAANLDVIQEVEYVK+EA+I+YLLECLQKTPPPVL+FCE+KADVD I
Sbjct: 381 ALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYI 440
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
E+LLLKGVEAVA+HGGKD EER+ A SFKA +KDVLVATDVASKGLD PDIQHVINYD
Sbjct: 441 QEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYD 500
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 530
MPAEIENYVHRIGRTGR GKTG+ATTFINKNQ+ETTLLDLK LL E+KQR+PP+LA+L+D
Sbjct: 501 MPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILADLDD 560
Query: 531 PMEDVD-AITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 588
P ED AI SGVKGCA+CGGLGHRI CPK + Q S+ +A +R DYFG GGYRGEI
Sbjct: 561 PQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFGGGGYRGEI 619
>sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis
thaliana GN=RH43 PE=3 SV=1
Length = 542
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/587 (75%), Positives = 490/587 (83%), Gaps = 45/587 (7%)
Query: 2 MEEEDDYVEYVPIAKRRAMEAQKILQRKGQASTLEDELEKSKLAEVKPSLLVKASQLKRD 61
ME +D YVEYVP+ +R A +K+++ G
Sbjct: 1 MEVDDGYVEYVPVEERLAQMKRKVVEEPG------------------------------- 29
Query: 62 QPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKKA 121
K M+E+LSD+K LMSV ELA+GITYT+PL T WKPPL +R+MS K
Sbjct: 30 --------------KGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQ 75
Query: 122 CDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGR 181
DLIRKQWHI V+GEDIPPPIKNF DM+FP P+L+ LK KGI+ PTPIQVQGLPVVLSGR
Sbjct: 76 MDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGR 135
Query: 182 DMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQ 241
DMIGIAFTGSGKTLVFVLPMI++A+ EE+MMPI GEGP L++CPSRELA+QTY+VVEQ
Sbjct: 136 DMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQ 195
Query: 242 FLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCR 301
F+ + + GYP LR+LLCIGGVDMRSQL+VVK+GVHIVVATPGRLKD+LAKKKM+LD CR
Sbjct: 196 FVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACR 255
Query: 302 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 361
LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALVKPVTVNVG
Sbjct: 256 LLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVG 315
Query: 362 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 421
RAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 316 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEA 375
Query: 422 VAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 481
VA+HGGKDQE+R+YAIS FKAGKKDVLVATDVASKGLDFPDIQHVINYDMP EIENYVHR
Sbjct: 376 VAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHR 435
Query: 482 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNA 541
IGRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME+ + I NA
Sbjct: 436 IGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANA 495
Query: 542 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 588
SGVKGCAYCGGLGHRI CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 496 SGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542
>sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41
PE=1 SV=2
Length = 622
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/504 (65%), Positives = 410/504 (81%), Gaps = 4/504 (0%)
Query: 78 MIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGED 137
++E++++ + LMSV+E+AKGITY DP+ T W PP + MS++ + +RK++HI+V+G+
Sbjct: 116 ILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDG 175
Query: 138 IPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVF 197
IPPPIK+FK+M+FP IL+ LK KGI+ PTPIQ+QG+P +LSGRDMIGIAFTGSGKTLVF
Sbjct: 176 IPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVF 235
Query: 198 VLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTL 257
LP+IM + +E +P EGP+ LI+CPSRELARQT+ ++E + +++ P LR
Sbjct: 236 TLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCA 295
Query: 258 LCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFE 317
LCIGG+ ++ Q+E ++ GVH++VATPGRL D+L KK ++LD CRYL LDEADR++D+GFE
Sbjct: 296 LCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFE 355
Query: 318 DDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYV 377
DIR +F +FK QRQTLLFSATMP KIQNFA+SALVKPVT+NVGRAGAA+LDVIQEVEYV
Sbjct: 356 GDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV 415
Query: 378 KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAI 437
K+EAK+VYLLECLQKTPPPVLIF E KADVD IHEYLLLKGVEAVA+HGGKDQEER AI
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 438 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 497
+F+ GKKDVLVATDVASKGLDFP IQHVINYDMP EIENYVHRIGRTGR G TGIATTF
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTF 535
Query: 498 INKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRI 557
INK E+ L+DLK LL EAKQ++PPVL L+ E ++ + G +GCA+CGGLGHRI
Sbjct: 536 INKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDE---SMLDIGGERGCAFCGGLGHRI 592
Query: 558 RDCPKLEHQKSMAIAS-SRRDYFG 580
DCPKLE ++ +++ R+DY
Sbjct: 593 TDCPKLEAMQTKQVSNIGRKDYLA 616
>sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41
PE=1 SV=2
Length = 622
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/504 (65%), Positives = 409/504 (81%), Gaps = 4/504 (0%)
Query: 78 MIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGED 137
++E++++ + LMSV+E+AKGITY DP+ T W PP + MS++ + +RK++HI+V+G+
Sbjct: 116 ILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDG 175
Query: 138 IPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVF 197
IPPPIK+FK+M+FP IL+ LK KGI PTPIQ+QG+P +LSGRDMIGIAFTGSGKTLVF
Sbjct: 176 IPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVF 235
Query: 198 VLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTL 257
LP+IM + +E +P EGP+ LI+CPSRELARQT+ ++E + +++ P LR
Sbjct: 236 TLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCA 295
Query: 258 LCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFE 317
LCIGG+ ++ Q+E ++ GVH++VATPGRL D+L KK ++LD CRYL LDEADR++D+GFE
Sbjct: 296 LCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFE 355
Query: 318 DDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYV 377
DIR +F +FK QRQTLLFSATMP KIQNFA+SALVKPVT+NVGRAGAA+LDVIQEVEYV
Sbjct: 356 GDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV 415
Query: 378 KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAI 437
K+EAK+VYLLECLQKTPPPVLIF E KADVD IHEYLLLKGVEAVA+HGGKDQEER AI
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 438 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 497
+F+ GKKDVLVATDVASKGLDFP IQHVINYDMP EIENYVHRIGRTGR G TGIATTF
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTF 535
Query: 498 INKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRI 557
INK E+ L+DLK LL EAKQ++PPVL L+ E ++ + G +GCA+CGGLGHRI
Sbjct: 536 INKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDE---SMLDIGGERGCAFCGGLGHRI 592
Query: 558 RDCPKLEHQKSMAIAS-SRRDYFG 580
DCPKLE ++ +++ R+DY
Sbjct: 593 TDCPKLEAMQTKQVSNIGRKDYLA 616
>sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster
GN=abs PE=1 SV=1
Length = 619
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 438/597 (73%), Gaps = 21/597 (3%)
Query: 4 EEDDYVEYVPIAKRRA---MEAQKILQ------RKGQASTLEDELEKSKLAEVKP----- 49
+ +DYV YVP+ +R+ ++ +I+Q + +S E+E + +V+
Sbjct: 20 DNEDYVPYVPVKERKKQHMIKLGRIVQLVSETAQPKSSSENENEDDSQGAHDVETWGRKY 79
Query: 50 --SLLVKASQLKR--DQPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLL 105
SLL + ++LK+ + ++S E+ +++E++++E+++ +K LM V ELAKGI Y P+
Sbjct: 80 NISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQPIK 139
Query: 106 TGWKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQ 165
T WKPP IR MS++ + +R + I+V+GE PPI++F++M+FP+ IL L AKGI
Sbjct: 140 TAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKN 199
Query: 166 PTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIV 225
PTPIQVQGLP VL+GRD+IGIAFTGSGKTLVFVLP+IM A+ +E +P EGP+ LI+
Sbjct: 200 PTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLII 259
Query: 226 CPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGR 285
CPSRELA+QT+E+++ + ++ G P++R+ L +GG+ + L+V+ RGVHIVVATPGR
Sbjct: 260 CPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGR 319
Query: 286 LKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQ 345
L DML KK + LD CRYL +DEADR++D+GFE+D+R +F FK QRQTLLFSATMP KIQ
Sbjct: 320 LMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQ 379
Query: 346 NFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKA 405
NFARSALVKPVT+NVGRAGAA+++V Q+VEYVKQEAK+VYLL+CLQKT PPVLIF E K
Sbjct: 380 NFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQ 439
Query: 406 DVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQH 465
DVD IHEYLLLKGVEAVA+HGGKDQEER A+ +++ GKKDVLVATDVASKGLDFP++QH
Sbjct: 440 DVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQH 499
Query: 466 VINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 525
VINYDMP +IENYVHRIGRTGR G+ATT INK ++ LLDLKHLL E KQ +P L
Sbjct: 500 VINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFL 559
Query: 526 AELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEH-QKSMAIASSRRDYFGS 581
EL E S GC YCGGLGHRI +CPKLE Q A RRDY +
Sbjct: 560 DELAPETEHQHLDLGDS--HGCTYCGGLGHRITECPKLEAVQNKQASNIGRRDYLSN 614
>sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium
discoideum GN=ddx41 PE=1 SV=1
Length = 671
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/534 (61%), Positives = 411/534 (76%), Gaps = 16/534 (2%)
Query: 61 DQPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKK 120
++ +I +++ +E +++++L K L+SV++ AK + YTD + T W+ P I +K
Sbjct: 140 EENKIKEEKRLDMEESDILKSLKTFKPLVSVKDRAKDVIYTDSIKTNWRAPRYILERDEK 199
Query: 121 ACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSG 180
+R Q +II DGEDIPPPI FK+M+ P+P++ L KGI +P+PIQVQGLPV+LSG
Sbjct: 200 DHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSG 259
Query: 181 RDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVE 240
RDMIGIA+TGSGKTLVF LPM++ A+ EE +PI+ GEGPF LI+CPSRELARQTY++V
Sbjct: 260 RDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVN 319
Query: 241 QFLTPM-RDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDN 299
F + ++ G+P LRTLL IGG+D+R Q + K+GVH+++ATPGRL D+L KKK+N
Sbjct: 320 SFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKL 379
Query: 300 CRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVN 359
C+YL LDEADRL+DLGFEDDIR V D+F QRQTLLFSATMP KIQ FARSALV PV VN
Sbjct: 380 CKYLGLDEADRLIDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVN 439
Query: 360 VGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGV 419
VGRAGAANL+V QEVE+VK EAKIVYLLECLQKTPPPVLIFCENK DVDDI+EYLLLK V
Sbjct: 440 VGRAGAANLNVTQEVEFVKPEAKIVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQV 499
Query: 420 EAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV 479
EAV++HG K Q+ERE AI +F+ GKKDVLVATDVASKGLDFP+IQHVIN+DMP EIENY+
Sbjct: 500 EAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYI 559
Query: 480 HRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAIT 539
HRIGRTGR G G+ATTFINKN +E+ LLDLK+LL EAKQ++PP L E+ D + + +
Sbjct: 560 HRIGRTGRRGNKGVATTFINKNNTESLLLDLKYLLIEAKQKVPPALLEIPDDNQYLQKLQ 619
Query: 540 NASGVKG----------CAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGG 583
+ +G G C YC G GHR+ +CPKL+ Q A +RD+FGSGG
Sbjct: 620 DRNGNTGGGADDDDTKPCEYCDGRGHRLVNCPKLKKQ-----AGPKRDFFGSGG 668
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/417 (42%), Positives = 249/417 (59%), Gaps = 15/417 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+R S + RK+ + + G DIP PI F + FP+ +LK++KA+G +PT IQ QG
Sbjct: 81 VRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQG 140
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ LSGRDM+GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 141 WPMALSGRDMVGIAATGSGKTLSYCLPGIV---HINAQPLLSPGDGPIVLVLAPTRELAV 197
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q + +F R +R GGV Q+ + RG IV+ATPGRL DML
Sbjct: 198 QIQKECSKFGKSSR------IRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAG 251
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q AR L
Sbjct: 252 KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLN 311
Query: 354 KPVTVNVGR---AGAANLDVIQEV--EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVD 408
P+ V +G A + N+ + EV E+ K++ + +L Q +LIF K D
Sbjct: 312 DPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRTCD 371
Query: 409 DIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 468
+I YL G A+A+HG KDQ ER++ ++ F+ G ++VATDVA++G+D I V+N
Sbjct: 372 EITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVN 431
Query: 469 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 525
YDMP IE+YVHRIGRTGR G TG A +F ++ +++ L +++EAKQ IP L
Sbjct: 432 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTED-NKSLGASLISIMREAKQNIPEEL 487
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/414 (42%), Positives = 252/414 (60%), Gaps = 15/414 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+++MS + RK+ + + G D+P PI+ F + FPE +LK++K +G +PT IQ QG
Sbjct: 85 VQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQG 144
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ LSGRDMIG+A TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 145 WPMALSGRDMIGVAATGSGKTLSYCLPGIV---HINAQPLLSPGDGPVVLVLAPTRELAV 201
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q + +F R +R GGV Q+ ++RGV I++ATPGRL DML
Sbjct: 202 QIQKECSKFGRSSR------IRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIG 255
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q AR L
Sbjct: 256 KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLH 315
Query: 354 KPVTVNVGRAG-AANLDVIQEVEYVK---QEAKIVYLLECLQKTP-PPVLIFCENKADVD 408
P+ VN+G AA+ + Q VE V + ++V LE K ++IF K D
Sbjct: 316 DPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIIIFASTKRTCD 375
Query: 409 DIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 468
+I YL G A+A+HG K Q+ER++ ++ F+ G+ ++VATDVA++G+D I VIN
Sbjct: 376 EITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDVKGINFVIN 435
Query: 469 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIP 522
YDMP IE+YVHRIGRTGR G TG A +F + ++T L +++EAKQ IP
Sbjct: 436 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTE-ANKTLGAQLISIMREAKQEIP 488
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/417 (43%), Positives = 246/417 (58%), Gaps = 15/417 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S + + RK+ + DG DIP PI +F + FP+ +LK++K +G +PT IQ QG P+
Sbjct: 80 SVQDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMA 139
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRDM+GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q +
Sbjct: 140 LSGRDMVGIASTGSGKTLSYCLPSIV---HINAQPLLSPGDGPIVLVLAPTRELAVQIQQ 196
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+F + R +R GG Q+ + RGV I +ATPGRL DML K NL
Sbjct: 197 ECSKFGSSSR------IRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNL 250
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q R L P+
Sbjct: 251 RRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQALTRDYLNDPIQ 310
Query: 358 VNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK-TPPP---VLIFCENKADVDDIHE 412
V VG AA+ + Q VE V + K L++ L+ T P LIF K D+I
Sbjct: 311 VTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLETATADPEAKCLIFASTKRTCDEITN 370
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
YL G A+A+HG K Q ER++ + FK GK ++VATDVA++G+D I +VIN DMP
Sbjct: 371 YLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVINLDMP 430
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 529
IE+YVHRIGRTGR G TG A +F N S+ DL +++EA Q IPP L +
Sbjct: 431 GNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLG-GDLCKIMREANQTIPPELMRFD 486
>sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP2 PE=3 SV=1
Length = 546
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 244/417 (58%), Gaps = 15/417 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+R S RK+ + + G DIP PI F + FP+ +L ++KA+G +PT IQ QG
Sbjct: 84 VRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQG 143
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ LSGRDM+GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 144 WPMALSGRDMVGIAATGSGKTLSYCLPGIV---HINAQPLLAPGDGPIVLVLAPTRELAV 200
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q +F R +R GGV Q+ + RG IV+ATPGRL DML
Sbjct: 201 QIQTECSKFGHSSR------IRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L
Sbjct: 255 KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLN 314
Query: 354 KPVTVNVGR---AGAANLDVIQEV--EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVD 408
P+ V VG + + N+ I EV ++ K++ YL Q LIF K D
Sbjct: 315 DPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCD 374
Query: 409 DIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 468
DI +YL G A+A+HG KDQ ER++ + F+ G+ ++VATDVA++G+D I +VIN
Sbjct: 375 DITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 469 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 525
YDMP IE+YVHRIGRTGR G TG A +F + Q++ L +++EA Q IPP L
Sbjct: 435 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTE-QNKGLGAKLISIMREANQNIPPEL 490
>sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP2 PE=1 SV=1
Length = 546
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 244/417 (58%), Gaps = 15/417 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+R S RK+ + + G DIP PI F + FP+ +L ++KA+G +PT IQ QG
Sbjct: 84 VRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQG 143
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ LSGRDM+GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 144 WPMALSGRDMVGIAATGSGKTLSYCLPGIV---HINAQPLLAPGDGPIVLVLAPTRELAV 200
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q +F R +R GGV Q+ + RG IV+ATPGRL DML
Sbjct: 201 QIQTECSKFGHSSR------IRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L
Sbjct: 255 KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLN 314
Query: 354 KPVTVNVGR---AGAANLDVIQEV--EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVD 408
P+ V VG + + N+ I EV ++ K++ YL Q LIF K D
Sbjct: 315 DPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCD 374
Query: 409 DIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 468
DI +YL G A+A+HG KDQ ER++ + F+ G+ ++VATDVA++G+D I +VIN
Sbjct: 375 DITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 469 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 525
YDMP IE+YVHRIGRTGR G TG A +F + Q++ L +++EA Q IPP L
Sbjct: 435 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTE-QNKGLGAKLISIMREANQNIPPEL 490
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 173/417 (41%), Positives = 243/417 (58%), Gaps = 15/417 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S + + RK+ + V G DIP PI F + FP+ +L+++K +G +PTPIQ QG P+
Sbjct: 102 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 161
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRDMIGIA TGSGKTL + LP I+ H + G+GP L++ P+RELA Q
Sbjct: 162 LSGRDMIGIAATGSGKTLSYCLPSIV---HINAQPQLQYGDGPIVLVLAPTRELAVQIQT 218
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+F R +R GG Q+ + RGV I +ATPGRL DML K NL
Sbjct: 219 ECSKFGKSSR------IRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNL 272
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q R L P+
Sbjct: 273 KRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQ 332
Query: 358 VNVGRAGAANLDVIQEV-----EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
V +G A I ++ E+ K++ + +L L + +L+F K D+I
Sbjct: 333 VTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITT 392
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
YL G A+A+HG K+Q ER++ + F+ GK ++VATDVA++G+D I HVINYDMP
Sbjct: 393 YLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMP 452
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 529
IE+YVHRIGRTGR G +G A +F + S+ DL +++EA Q +PP L +
Sbjct: 453 GNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLG-GDLCKIMREANQTVPPELQRFD 508
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 251/416 (60%), Gaps = 13/416 (3%)
Query: 117 MSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPV 176
M+++ + R++ I V+G D+P P++ F+D+ FPE +L+++ G V+PTPIQ QG P+
Sbjct: 65 MTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Query: 177 VLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTY 236
L GRD+IGIA TGSGKTL ++LP I+ H + PG+GP L++ P+RELA Q
Sbjct: 125 ALRGRDLIGIAETGSGKTLAYLLPAIV---HVNAQPILAPGDGPIVLVLAPTRELAVQIQ 181
Query: 237 EVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMN 296
+ +F + +++ GGV Q+ +++GV IV+ATPGRL DM+ N
Sbjct: 182 QEATKFGASSK------IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTN 235
Query: 297 LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPV 356
L YL LDEADR++D+GFE I+++ + RQTL +SAT P +++ AR+ L P
Sbjct: 236 LRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPY 295
Query: 357 TVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT--PPPVLIFCENKADVDDIHEY 413
V +G AN + Q VE + + K L+ L+ +LIF + K D I
Sbjct: 296 KVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQ 355
Query: 414 LLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPA 473
L + G A+++HG K Q ER++ +S FK+GK ++ ATDVA++GLD D+++VINYD P
Sbjct: 356 LRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPG 415
Query: 474 EIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 529
+E+YVHRIGRTGR G G A TF + DL ++L+EA Q++ P LA +
Sbjct: 416 SLEDYVHRIGRTGRAGAKGTAYTFFTAANARFA-KDLINILEEAGQKVSPELANMG 470
>sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp2 PE=3 SV=1
Length = 549
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 251/416 (60%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S++ D R++ + V G+++P P++ F + FP+ +L ++K++G +PT IQ QG P+
Sbjct: 100 SQREVDEFRQEHKMTVQGKNVPRPVETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMA 159
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q
Sbjct: 160 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLVLAPTRELAVQIQT 216
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML + NL
Sbjct: 217 EITKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNL 270
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 271 RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQ 330
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G +AN + Q VE V K++ I +L + ++ +LIF K D+I
Sbjct: 331 VNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITR 390
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q+ER++ ++ FKAGK ++VATDVAS+G+D DI HV+NYD P
Sbjct: 391 FLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYP 450
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+Y+HRIGRTGR G G A TF + S+ DL +L EAKQ+I P LAE+
Sbjct: 451 NNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQA-RDLVTILTEAKQQIDPRLAEM 505
>sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp2
PE=3 SV=1
Length = 563
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 248/416 (59%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S++ D RK+ + V G D+P P++ F + FP+ +L ++KA+G +PT IQ QG P+
Sbjct: 115 SQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMA 174
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP LI+ P+RELA Q
Sbjct: 175 LSGRDVVGIAETGSGKTLSYCLPAIV---HINAQPLLAPGDGPIVLILAPTRELAVQIQA 231
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML + NL
Sbjct: 232 EISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNL 285
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 286 RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQ 345
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G +AN + Q VE + K++ I +L + ++ L+F K D+I
Sbjct: 346 VNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITR 405
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q+ER++ ++ FK GK ++VATDVAS+G+D DI HVINYD P
Sbjct: 406 FLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYP 465
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+YVHRIGRTGR G G A TF + ++ DL +L EAKQ+I P LAE+
Sbjct: 466 NNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQA-RDLVTILSEAKQQIDPRLAEM 520
>sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-2 PE=3 SV=2
Length = 562
Score = 322 bits (824), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 244/418 (58%), Gaps = 17/418 (4%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S D R I V G ++P P++ F + FP ++ ++KA+G PT IQ QG P+
Sbjct: 107 SPAEVDKFRADHSIAVFGNNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMA 166
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP LI+ P+RELA Q +
Sbjct: 167 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLILAPTRELAVQIQQ 223
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML K NL
Sbjct: 224 EISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNL 277
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQTL++SAT P +++N A L +
Sbjct: 278 RRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNLAADFLTDFIQ 337
Query: 358 VNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK------TPPPVLIFCENKADVDDI 410
VN+G AAN + Q VE V + K +++ L+K +LIF K DDI
Sbjct: 338 VNIGSMDLAANHRITQIVEVVSESEKRDRMIKHLEKIMEGRENQNKILIFTGTKRVADDI 397
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
+L G A+++HG K Q ER++ + FK GK ++VATDVAS+G+D +I HV+NYD
Sbjct: 398 TRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYD 457
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
P E+Y+HRIGRTGR G G A TF + S+ +L +LQEAKQ+I P LAE+
Sbjct: 458 YPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQA-RELVGVLQEAKQQIDPRLAEM 514
>sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2
PE=3 SV=2
Length = 547
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 248/416 (59%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S++ + RK+ + V G ++P P++NF + FP+ +L ++KA+G +PT IQ QG P+
Sbjct: 96 SEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMA 155
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP LI+ P+RELA Q
Sbjct: 156 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLILAPTRELAVQIQA 212
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML + NL
Sbjct: 213 EISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNL 266
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 267 RRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQ 326
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G +AN + Q VE V K++ I +L + ++ LIF K D+I
Sbjct: 327 VNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITR 386
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q+ER++ ++ FK GK ++VATDVAS+G+D DI HV+NYD P
Sbjct: 387 FLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 446
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+Y+HRIGRTGR G G A TF S+ DL +L EAKQ+I P LAE+
Sbjct: 447 NNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA-RDLVTILTEAKQQIDPRLAEM 501
>sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp2 PE=3 SV=1
Length = 554
Score = 321 bits (823), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 250/416 (60%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S++ D RK++ + V G++IP P++ F + FP+ +L ++KA+G +PT IQ QG P+
Sbjct: 105 SQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMA 164
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q
Sbjct: 165 LSGRDVVGIAETGSGKTLSYCLPAIV---HINAQPLLAPGDGPIVLVLAPTRELAVQIQA 221
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML + NL
Sbjct: 222 EITKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNL 275
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 276 RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQ 335
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G +AN + Q VE V K++ I +L + ++ LIF K D+I
Sbjct: 336 VNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITR 395
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q+ER++ ++ FK GK ++VATDVAS+G+D DI HV+NYD P
Sbjct: 396 FLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 455
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+YVHRIGRTGR G G A TF + S+ DL +L EAKQ+I P LAE+
Sbjct: 456 NNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA-RDLVTILTEAKQQIDPRLAEM 510
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2
PE=3 SV=1
Length = 545
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 248/416 (59%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S++ + RK+ + V G ++P P++NF + FP+ +L ++KA+G +PT IQ QG P+
Sbjct: 94 SEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMA 153
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP LI+ P+RELA Q
Sbjct: 154 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLILAPTRELAVQIQT 210
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML + NL
Sbjct: 211 EISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNL 264
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 265 RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQ 324
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G +AN + Q VE V K++ I +L + ++ LIF K D+I
Sbjct: 325 VNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITR 384
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q+ER++ ++ FK GK ++VATDVAS+G+D DI HV+NYD P
Sbjct: 385 FLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 444
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+Y+HRIGRTGR G G A TF S+ DL +L EAKQ+I P LAE+
Sbjct: 445 NNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA-RDLVTILTEAKQQIDPRLAEM 499
>sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1
Length = 565
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 248/416 (59%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S++ D RK+ + V G ++P P++ F + FP+ +L ++KA+G +PT IQ QG P+
Sbjct: 112 SQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMA 171
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP LI+ P+RELA Q
Sbjct: 172 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLILAPTRELAVQIQA 228
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML + NL
Sbjct: 229 EISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNL 282
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 283 RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQ 342
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G +AN + Q VE V K++ I +L + ++ LIF K D+I
Sbjct: 343 VNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRANKCLIFTGTKRIADEITR 402
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q+ER++ ++ FK GK ++VATDVAS+G+D DI HV+NYD P
Sbjct: 403 FLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 462
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+YVHRIGRTGR G G A TF + S+ DL +L EAKQ+I P LAE+
Sbjct: 463 NNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA-RDLVTILTEAKQQIDPRLAEM 517
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 253/416 (60%), Gaps = 13/416 (3%)
Query: 117 MSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPV 176
M+ + RK I V+G+DIP P+K+F+D+ FP+ +L+++K G +PTPIQ QG P+
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query: 177 VLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTY 236
+ GRD+IGIA TGSGKTL ++LP I+ + M+ G+GP L++ P+RELA Q
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPML---AHGDGPIVLVLAPTRELAVQIQ 189
Query: 237 EVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMN 296
+ +F + + ++T GGV Q+ +++GV IV+ATPGRL DM+ N
Sbjct: 190 QEASKFGSSSK------IKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTN 243
Query: 297 LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPV 356
L YL LDEADR++D+GF+ IR++ H + RQTL +SAT P +++ ++ L P
Sbjct: 244 LRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPY 303
Query: 357 TVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT--PPPVLIFCENKADVDDIHEY 413
V +G + AN + Q V+ + + K L++ L+ +L+F + K D I
Sbjct: 304 KVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQ 363
Query: 414 LLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPA 473
L + G A+++HG K Q ER++ +S F++GK ++ ATDVA++GLD D+++VINYD P
Sbjct: 364 LRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPG 423
Query: 474 EIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 529
+E+YVHRIGRTGR G G A TF + +L ++LQEA Q++ P LA +
Sbjct: 424 SLEDYVHRIGRTGRAGAKGTAYTFFTVANARFA-KELTNILQEAGQKVSPELASMG 478
>sp|A4QSS5|DBP2_MAGO7 ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1
Length = 548
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/418 (41%), Positives = 244/418 (58%), Gaps = 17/418 (4%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S+ D R++ + V G D+P P++ F + FP ++ ++KA+G PT IQ QG P+
Sbjct: 100 SQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMA 159
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP LI+ P+RELA Q
Sbjct: 160 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLILAPTRELAVQIQA 216
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML K NL
Sbjct: 217 EISKFGKSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNL 270
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQTL++SAT P +++N A L +
Sbjct: 271 RRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQ 330
Query: 358 VNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK------TPPPVLIFCENKADVDDI 410
VN+G +AN + Q VE V + K ++ ++K + +LIF K D+I
Sbjct: 331 VNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEI 390
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
+L G A+++HG K Q ER++ + FK GK ++VATDVAS+G+D +I HV+NYD
Sbjct: 391 TRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYD 450
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
P E+Y+HRIGRTGR G G A TF S+ DL +LQEAKQ I P LAE+
Sbjct: 451 YPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA-RDLLGVLQEAKQEIDPRLAEM 507
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/413 (42%), Positives = 239/413 (57%), Gaps = 15/413 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S+ RK+ + G DIP PI +F + FP+ +L ++K +G +PT IQ QG P+
Sbjct: 100 SESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMA 159
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRDMIGIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q +
Sbjct: 160 LSGRDMIGIAATGSGKTLSYCLPSIV---HINAQPLLGPGDGPIVLVLAPTRELAVQIQQ 216
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+F R +R GG Q+ + RGV I +ATPGRL DML K NL
Sbjct: 217 ECSKFGASSR------IRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNL 270
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q R L P+
Sbjct: 271 RRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDYLNDPIQ 330
Query: 358 VNVGR---AGAANLDVIQEV--EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
V +G A + + I EV E+ K++ + +L VLIF K D+I
Sbjct: 331 VTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEAKVLIFSSTKRACDEITS 390
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
YL G A+A+HG K Q ER++ + FK GK ++VATDVA++G+D I +VINYDMP
Sbjct: 391 YLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISYVINYDMP 450
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 525
IE+YVHRIGRTGR G TG A + + S+ DL +++EA Q +PP L
Sbjct: 451 GNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLG-GDLCKIMREANQTVPPEL 502
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 248/417 (59%), Gaps = 15/417 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+ +MS+ RK+ + + G D+P PI++F + FP +L ++K +G +PT IQ QG
Sbjct: 84 VAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQG 143
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ LSGRDMIG+A TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 144 WPMALSGRDMIGVAATGSGKTLSYCLPGIV---HINAQPLLSPGDGPIVLVLAPTRELAV 200
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q + +F R +R GGV Q+ ++RGV I++ATPGRL DML
Sbjct: 201 QIQKECSKFGASSR------IRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIG 254
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L
Sbjct: 255 KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDYLH 314
Query: 354 KPVTVNVGR---AGAANLDVIQEV--EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVD 408
P+ V +G + + + I EV ++ K++ +L Q ++IF K D
Sbjct: 315 DPIQVQIGSLELSASHTITQIVEVLTDFEKRDRLAKHLETASQDQDSKIIIFASTKRTCD 374
Query: 409 DIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 468
+I YL +G A+A+HG K Q ER++ ++ F++G+ ++VATDVA++G+D I +VIN
Sbjct: 375 EITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 469 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 525
YDMP IE+YVHRIGRTGR G TG A +F + +K +++EAKQ IP L
Sbjct: 435 YDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIK-IMREAKQDIPEEL 490
>sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP2 PE=3 SV=1
Length = 542
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 245/421 (58%), Gaps = 16/421 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+ + S D RK+ I V G+++P P++ F + FP+ ++ ++KA+G +PT IQ QG
Sbjct: 96 VSQRSTHEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQG 155
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ LSGRD++GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 156 WPMALSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLVLAPTRELAV 212
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q + +F R +R GGV Q+ + RGV + +ATPGRL DML
Sbjct: 213 QIQTEITKFGKSSR------IRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDMLEAG 266
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ + RQT ++SAT P ++ A+ L
Sbjct: 267 KTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQLAQDFLH 326
Query: 354 KPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT-----PPPVLIFCENKADV 407
+ VN+G +AN + Q VE V + K + + L + VLIF K
Sbjct: 327 DYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRMAKHLDRIMEANKHSKVLIFTGTKRVA 386
Query: 408 DDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 467
DDI +L G A+++HG K Q ER++ ++ FK GK ++VATDVAS+G+D DI HV+
Sbjct: 387 DDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVL 446
Query: 468 NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 527
NYD P E+YVHRIGRTGR G G A T + ++ DL +L E+KQ+I P LAE
Sbjct: 447 NYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQA-RDLVAILSESKQQIDPRLAE 505
Query: 528 L 528
+
Sbjct: 506 M 506
>sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp2 PE=2 SV=2
Length = 550
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 241/420 (57%), Gaps = 15/420 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+R S RK+ I+V G ++P P+ F++ FP +LK++K G PTPIQ Q
Sbjct: 93 VRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ +SGRDM+GI+ TGSGKTL + LP I+ H + PG+GP L++ P+RELA
Sbjct: 153 WPMAMSGRDMVGISATGSGKTLSYCLPAIV---HINAQPLLSPGDGPIVLVLAPTRELAV 209
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q + +F R +R GGV Q+ + RGV I +ATPGRL DML
Sbjct: 210 QIQQECTKFGKSSR------IRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSN 263
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ D + RQT++FSAT P ++Q AR L
Sbjct: 264 KTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLN 323
Query: 354 KPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYL----LECLQKTPPPVLIFCENKADVD 408
+ V VG AA+ ++ Q VE V K L E L+ VLIF K D
Sbjct: 324 DYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVAD 383
Query: 409 DIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVIN 468
DI +L G A+A+HG K Q+ER++ ++ F+ GK ++VATDVAS+G+D I HV N
Sbjct: 384 DITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFN 443
Query: 469 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
YD P E+YVHRIGRTGR G G A T+ + ++ +L +L EAKQ I P L E+
Sbjct: 444 YDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQA-RELVSILSEAKQDIDPKLEEM 502
>sp|Q2H720|DBP2_CHAGB ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DBP2 PE=3 SV=1
Length = 562
Score = 315 bits (808), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 243/418 (58%), Gaps = 17/418 (4%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S+ D R+ + V G ++P P++ F + FP ++ ++KA+G PT IQ QG P+
Sbjct: 111 SQAEVDKFRRDHAMTVAGNNVPSPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMA 170
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q +
Sbjct: 171 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLVLAPTRELAVQIQQ 227
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q + RGV + +ATPGRL DML + NL
Sbjct: 228 EITKFGKSSR------IRNTCVYGGVPKGPQTRDLSRGVEVCIATPGRLIDMLESGRTNL 281
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 282 RRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRALASDFLTDFIQ 341
Query: 358 VNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK------TPPPVLIFCENKADVDDI 410
VN+G AAN + Q VE V + K +++ L+K + +LIF K D+I
Sbjct: 342 VNIGSMDLAANHRITQVVEVVNESEKRDKMIKHLEKIMEDKESQNKILIFTGTKRVADEI 401
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
+L G A+++HG K Q ER++ + FK GK ++VATDVAS+G+D +I HV+NYD
Sbjct: 402 TRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYD 461
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
P E+Y+HRIGRTGR G G A TF + S+ DL +LQEAKQ I P LAE+
Sbjct: 462 YPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQA-RDLVGVLQEAKQHIDPRLAEM 518
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 315 bits (807), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 245/409 (59%), Gaps = 15/409 (3%)
Query: 125 IRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMI 184
RK+ + + G+ IP P+ NF + FP +LK++K +G +PT IQ QG P+ L+GRD+I
Sbjct: 98 FRKENQMTLHGDGIPKPVTNFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVI 157
Query: 185 GIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLT 244
GIA TGSGKTL + LP I+ + M+ G+GP L++ P+RELA Q + +F
Sbjct: 158 GIASTGSGKTLSYCLPAIVHINAQPMLSH---GDGPIVLVLAPTRELAVQIQQECSKFGK 214
Query: 245 PMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLT 304
+ +R GGV Q+ + RGV IV+ATPGRL DML K NL YL
Sbjct: 215 SSK------IRNTCVYGGVPRGQQIRDLARGVEIVIATPGRLLDMLESGKTNLRRVTYLV 268
Query: 305 LDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGR-- 362
LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q A L + VN+G
Sbjct: 269 LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQRLAHDYLKDQIQVNIGSLE 328
Query: 363 -AGAANLDVIQEV--EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGV 419
+ + N+ + EV EY K++ + +L ++ LIF K DDI ++L G
Sbjct: 329 LSASHNITQVVEVCTEYEKRDRLVKHLETVMENKESKCLIFTGTKRVADDITKFLRQDGW 388
Query: 420 EAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV 479
A+A+HG K Q+ER++ ++ F+ GK ++VATDVAS+G+D I VINYD P+ E+YV
Sbjct: 389 PALAIHGDKQQQERDWVLNEFRQGKSPIMVATDVASRGIDVKGINFVINYDYPSNSEDYV 448
Query: 480 HRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
HRIGRTGR G G A T+ ++ + DL +L+EAKQ I P L E+
Sbjct: 449 HRIGRTGRAGTKGTAYTYFTEDNRKQA-RDLLVILREAKQHIDPKLEEM 496
>sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS)
GN=DBP2 PE=3 SV=2
Length = 545
Score = 315 bits (806), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 246/416 (59%), Gaps = 15/416 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S + + RK+ + V G+++P P++ F + FP+ ++ ++KA+G +PTPIQ QG P+
Sbjct: 103 SAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMA 162
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q
Sbjct: 163 LSGRDVVGIAETGSGKTLTYCLPAIV---HINAQPLLGPGDGPIVLVLAPTRELAVQIQA 219
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+ +F R +R GGV Q+ + RGV + +ATPGRL DML K NL
Sbjct: 220 EITKFGKSSR------IRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNL 273
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L +
Sbjct: 274 RRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLAHDFLHDYIQ 333
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
V +G +AN + Q VE V K++ I +L + +LIF K DDI
Sbjct: 334 VYIGSQDLSANHRITQIVEIVSDFEKRDRMINHLERIMDDKKSKILIFTGTKRVADDITR 393
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q ER++ ++ FK GK ++VATDVAS+G+D DI HV+NYD P
Sbjct: 394 FLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 453
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+YVHRIGRTGR G G A T + ++ DL ++L E+KQ+I P LAE+
Sbjct: 454 NNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQA-RDLVNILTESKQQIDPRLAEM 508
>sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3
SV=1
Length = 555
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 247/417 (59%), Gaps = 17/417 (4%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S + R++ + + G ++P P++ F + FP ++ ++KA+G PT IQ QG P+
Sbjct: 109 SDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMA 168
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRD++GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q E
Sbjct: 169 LSGRDVVGIAETGSGKTLTYCLPSIV---HINAQPLLAPGDGPIVLVLAPTRELAVQIQE 225
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+++F R +R GGV Q+ + RGV + +ATPGRL DML K NL
Sbjct: 226 EMKKFGRSSR------IRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNL 279
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ + RQTL++SAT P +++ A L +
Sbjct: 280 RRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQ 339
Query: 358 VNVGRAG-AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
VN+G AAN + Q VE V K++ I ++ + ++ +LIF K D+I
Sbjct: 340 VNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITR 399
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
+L G A+++HG K Q ER++ + FK GK ++VATDVAS+G+D +I HV+NYD P
Sbjct: 400 FLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYP 459
Query: 473 AEIENYVHRIGRTGRCGKTGIATT-FINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
E+Y+HRIGRTGR G G A T F NQ + DL ++LQEAKQ+I P L E+
Sbjct: 460 NNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQAR--DLVNVLQEAKQQIDPRLVEM 514
>sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp2 PE=3 SV=2
Length = 514
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 244/410 (59%), Gaps = 17/410 (4%)
Query: 125 IRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMI 184
R Q +I V G +IP P++ F + FP ++ ++KA+G PTPIQ QG P+ LSGRD++
Sbjct: 84 FRAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVV 143
Query: 185 GIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLT 244
GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q + + +F
Sbjct: 144 GIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGK 200
Query: 245 PMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLT 304
R +R GGV Q+ + +GV + +ATPGRL DM+ K NL YL
Sbjct: 201 SSR------IRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLV 254
Query: 305 LDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG 364
LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L + + VN+G
Sbjct: 255 LDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNEFIQVNIGSLE 314
Query: 365 -AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGV 419
+AN + Q VE V K++ +L + ++ +LIF K DDI +L G
Sbjct: 315 LSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGW 374
Query: 420 EAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV 479
A+++HG K Q ER++ ++ FK GK ++VATDVAS+G+D +I HV NYD P E+Y+
Sbjct: 375 PALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYI 434
Query: 480 HRIGRTGRCGKTGIATT-FINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
HRIGRTGR G+ G A T F NQ + DL ++L EAKQ I P LAE+
Sbjct: 435 HRIGRTGRAGQKGTAITLFTTDNQKQAR--DLVNVLTEAKQVIDPRLAEM 482
>sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1
Length = 572
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/410 (41%), Positives = 243/410 (59%), Gaps = 17/410 (4%)
Query: 125 IRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMI 184
R Q +I V G +IP P++ F + FP ++ ++KA+G PTPIQ QG P+ LSGRD++
Sbjct: 131 FRAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVV 190
Query: 185 GIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLT 244
GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q + + +F
Sbjct: 191 GIAETGSGKTLTYCLPAIV---HINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGK 247
Query: 245 PMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLT 304
R +R GGV Q+ + +GV + +ATPGRL DM+ K NL YL
Sbjct: 248 SSR------IRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLV 301
Query: 305 LDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG 364
LDEADR++D+GFE IR++ + RQT ++SAT P +++ A L + VN+G
Sbjct: 302 LDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNDFIQVNIGSLE 361
Query: 365 -AANLDVIQEVEYV----KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGV 419
+AN + Q VE V K++ +L + ++ +LIF K DDI +L G
Sbjct: 362 LSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGW 421
Query: 420 EAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV 479
A+++HG K Q ER++ ++ FK GK ++VATDVAS+G+D +I HV NYD P E+Y+
Sbjct: 422 PALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYI 481
Query: 480 HRIGRTGRCGKTGIATT-FINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
HRIGRTGR G+ G A T F NQ + DL ++L EAKQ I P LAE+
Sbjct: 482 HRIGRTGRAGQKGTAITLFTTDNQKQAR--DLVNVLTEAKQVIDPRLAEM 529
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 311 bits (798), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/417 (40%), Positives = 244/417 (58%), Gaps = 29/417 (6%)
Query: 133 VDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSG 192
V GED+PPP F+ E +L+ + G PTP+Q +P+ L+GRD++ A TGSG
Sbjct: 74 VSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSG 133
Query: 193 KTLVFVLPMI--MIAM------HEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLT 244
KT F LP++ ++A H E P L++ P+RELA Q E ++F
Sbjct: 134 KTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKF-- 191
Query: 245 PMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLT 304
+ LR ++ GG M +QL ++RG I+VATPGRL DM+ + K++L+ +YL
Sbjct: 192 ----SFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKVSLEAIKYLV 247
Query: 305 LDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPTKIQNFARSALVKPVTVNV 360
+DEADR++D+GFE IR++ + K+ RQT+LFSAT P +IQ A L + + V
Sbjct: 248 MDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLSNYIFITV 307
Query: 361 GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTP----------PPVLIFCENKADVDDI 410
GR G++ ++Q+VE + K YLL+ LQ+ P L+F E K + D +
Sbjct: 308 GRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETKREADSL 367
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
+L KG A A+HG + Q+ERE A+ SFK G ++VATDVAS+GLD P++ HVINYD
Sbjct: 368 RYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYD 427
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 527
+P IE+YVHRIGRTGR GK G AT F ++ + L L+ EAKQ +P L +
Sbjct: 428 LPKSIEDYVHRIGRTGRAGKAGSATAFFTESD-HSLAKGLLELMTEAKQDVPDWLVQ 483
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 247/418 (59%), Gaps = 13/418 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
++ M+++ + R + I V+G D+P P+K F+D FP+ IL+ + G +PTPIQ QG
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ L GRD+IGIA TGSGKTL ++LP ++ H + +GP LI+ P+RELA
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALV---HVSAQPRLGQDDGPIVLILAPTRELAV 252
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q E +F +R +R+ GG Q+ ++RGV IV+ATPGRL DML +
Sbjct: 253 QIQEESRKF--GLRSG----VRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQ 306
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
NL YL LDEADR++D+GFE IR++ + RQTLL+SAT P +++ AR L
Sbjct: 307 HTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLR 366
Query: 354 KPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENKADVDDI 410
P +G AN + Q +E V K LL L++ +LIF E K D +
Sbjct: 367 DPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQV 426
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
L + G A+A+HG K Q ER+ ++ FK+G+ ++ ATDVA++GLD DI+ V+NYD
Sbjct: 427 TRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYD 486
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
P +E+Y+HRIGRTGR G G+A TF + ++ +L +LQEA Q +PP L+ L
Sbjct: 487 FPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA-RELVKILQEAGQVVPPTLSAL 543
>sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP2 PE=3 SV=2
Length = 552
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 245/407 (60%), Gaps = 14/407 (3%)
Query: 126 RKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIG 185
R + + G+++P P+ +F + FP+ IL ++K G +P+ IQ Q P+ LSGRD++
Sbjct: 113 RASKQMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMGFSEPSAIQSQAWPMALSGRDLVA 172
Query: 186 IAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTP 245
IA TGSGKT+ F LP M+ ++ + ++ PG+GP LI+ P+RELA Q +F
Sbjct: 173 IAETGSGKTIGFALPA-MVHINAQPLLK--PGDGPIALILAPTRELANQIQVECNRF--- 226
Query: 246 MRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 305
G LRT GGV Q+ ++RG I +ATPGRL DM+ K NL YL +
Sbjct: 227 ---GGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMVDAGKTNLRRVTYLVM 283
Query: 306 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG- 364
DEADR++D+GFE IR++ + RQTL+FSAT P ++Q A L VN+G
Sbjct: 284 DEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNNYAQVNIGSTEL 343
Query: 365 AANLDVIQEVEY---VKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 421
AAN +V Q +E +++ K++ LE + V+IF K DD+ ++L G A
Sbjct: 344 AANHNVKQIIEVCTEFEKKGKLIGHLETISAENGKVIIFTSTKRVADDLTKFLRQDGWPA 403
Query: 422 VAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 481
+A+HG K Q+ER++ ++ FK+G+ ++VAT VAS+GLD DI +VINYD P E+YVH+
Sbjct: 404 LAIHGDKQQQERDWVLAEFKSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQ 463
Query: 482 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
IGRTGR G+TG A T+ S++ +L +L+EAKQ IP + E+
Sbjct: 464 IGRTGRAGRTGTAYTYFTPENSKSA-RELIGILREAKQEIPREIEEM 509
>sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP2 PE=3 SV=1
Length = 540
Score = 308 bits (789), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 251/443 (56%), Gaps = 23/443 (5%)
Query: 90 SVRELAKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMR 149
S+ + K DP +T S + R + + + G+++P PI F++
Sbjct: 66 SLAKFEKNFYVQDPRVTA---------RSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAG 116
Query: 150 FPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEE 209
FP+ I+ +++ G P+ IQ Q P+ LSGRD++ IA TGSGKT+ F LP ++ H
Sbjct: 117 FPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMV---HIN 173
Query: 210 MMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQL 269
+ PG+GP LI+ P+RELA Q +F R +R GG Q+
Sbjct: 174 AQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSR------IRNTAIYGGAPKGPQI 227
Query: 270 EVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKA 329
++RGV I VATPGRL DML K NL YL +DEADR++D+GFE IR++ +
Sbjct: 228 RDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRP 287
Query: 330 QRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQEVEY---VKQEAKIVY 385
RQTLLFSAT P ++Q A L + VN+G AN +V Q VE + +K++
Sbjct: 288 DRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLS 347
Query: 386 LLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKK 445
LE + + VLIF K DD+ ++L + G A+A+HG K Q ER++ ++ FK+G+
Sbjct: 348 HLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRS 407
Query: 446 DVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSET 505
+++ATDVAS+GLD DI +VINYD P E+Y+HRIGRTGR G+ G + T+ + S+
Sbjct: 408 PIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKA 467
Query: 506 TLLDLKHLLQEAKQRIPPVLAEL 528
+L +L+E+K IPP L E+
Sbjct: 468 A-RELVQILRESKADIPPELEEM 489
>sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1
Length = 540
Score = 308 bits (789), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 251/443 (56%), Gaps = 23/443 (5%)
Query: 90 SVRELAKGITYTDPLLTGWKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMR 149
S+ + K DP +T S + R + + + G+++P PI F++
Sbjct: 66 SLAKFEKNFYVQDPRVTA---------RSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAG 116
Query: 150 FPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEE 209
FP+ I+ +++ G P+ IQ Q P+ LSGRD++ IA TGSGKT+ F LP ++ H
Sbjct: 117 FPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMV---HIN 173
Query: 210 MMMPIVPGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQL 269
+ PG+GP LI+ P+RELA Q +F R +R GG Q+
Sbjct: 174 AQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSR------IRNTAIYGGAPKGPQI 227
Query: 270 EVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKA 329
++RGV I VATPGRL DML K NL YL +DEADR++D+GFE IR++ +
Sbjct: 228 RDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRP 287
Query: 330 QRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQEVEY---VKQEAKIVY 385
RQTLLFSAT P ++Q A L + VN+G AN +V Q VE + +K++
Sbjct: 288 DRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLS 347
Query: 386 LLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKK 445
LE + + VLIF K DD+ ++L + G A+A+HG K Q ER++ ++ FK+G+
Sbjct: 348 HLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRS 407
Query: 446 DVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSET 505
+++ATDVAS+GLD DI +VINYD P E+Y+HRIGRTGR G+ G + T+ + S+
Sbjct: 408 PIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKA 467
Query: 506 TLLDLKHLLQEAKQRIPPVLAEL 528
+L +L+E+K IPP L E+
Sbjct: 468 A-RELVQILRESKADIPPELEEM 489
>sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp.
japonica GN=Os01g0911100 PE=2 SV=2
Length = 666
Score = 308 bits (789), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 255/450 (56%), Gaps = 26/450 (5%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
++ MS R+Q I V+G D+P P++ F++ FP+ ++ + G V+PTPIQ QG
Sbjct: 222 VQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQG 281
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ L GRDMIGIA TGSGKTL ++LP ++ H + G+GP LI+ P+RELA
Sbjct: 282 WPMALKGRDMIGIAQTGSGKTLSYLLPGLV---HVGAQPRLEQGDGPIVLILAPTRELAV 338
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q + +F Y R+ GG Q+ ++RGV IV+ATPGRL DML
Sbjct: 339 QIQQESGKF------GSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGG 392
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
NL YL LDEADR++D+GFE IR++ + RQTL +SAT P ++++ AR L
Sbjct: 393 HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQ 452
Query: 354 KPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENKADVDDI 410
P V +G AN + Q +E + + K L + L +LIF + K D D +
Sbjct: 453 NPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKV 512
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
L + G A+++HG K Q ER+Y ++ FK+GK ++ ATDVA++GLD DI+ VIN+D
Sbjct: 513 TRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFD 572
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 530
P +E+Y+HRIGRTGR G +G A TF + ++ + +L +L+EA Q + P L +
Sbjct: 573 FPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFS-RNLVKILREAGQVVNPALESM-- 629
Query: 531 PMEDVDAITNASGVKGCAY----CGGLGHR 556
+AS + G + GG G+R
Sbjct: 630 -------AKSASSMGGGNFRSRGRGGFGNR 652
>sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp.
japonica GN=Os11g0599500 PE=3 SV=1
Length = 623
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 244/412 (59%), Gaps = 27/412 (6%)
Query: 133 VDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSG 192
G ++PPP+ F ++ + + ++ V+PTP+Q +P+ L+GRD++ A TGSG
Sbjct: 145 TSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSG 204
Query: 193 KTLVFVLPMIMIAMHEEMMMPIVPGEG------PFCLIVCPSRELARQTYEVVEQFLTPM 246
KT F P+I M P G P LI+ P+REL+ Q +E +F
Sbjct: 205 KTAAFCFPIISGIMRGPPAQ--RPQRGGMRTACPLALILSPTRELSMQIHEEARKF---- 258
Query: 247 RDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLD 306
+ +R ++ GG + QL ++RGV I+VATPGRL D+L + +++L + RYL LD
Sbjct: 259 --SYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALD 316
Query: 307 EADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGR 362
EADR++D+GFE +R + + RQT+LFSAT P +IQ A L + + VGR
Sbjct: 317 EADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGR 376
Query: 363 AGAANLDVIQEVEYVKQEAKIVYLLECLQKT--------PPPVLIFCENKADVDDIHEYL 414
G++ ++Q VE+V++ K +L++ L P L+F E K D + +L
Sbjct: 377 VGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTLVFVETKRGADSLEHWL 436
Query: 415 LLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAE 474
+ G A ++HG ++Q+EREYA+ SFK+G +LVATDVA++GLD P + HV+N+D+P +
Sbjct: 437 CMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPND 496
Query: 475 IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 526
I++YVHRIGRTGR GK+G+AT F N+N S + L L+QE+ Q +P L+
Sbjct: 497 IDDYVHRIGRTGRAGKSGLATAFFNENNS-SMARSLAELMQESNQEVPAWLS 547
>sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP28 PE=3 SV=1
Length = 738
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 255/440 (57%), Gaps = 34/440 (7%)
Query: 113 PIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQ 172
P+ M ++ + R+ + I G IP P++N+++ P IL ++ G +P+PIQ Q
Sbjct: 285 PLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQ 344
Query: 173 GLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELA 232
+P+ + RD+IG+A TGSGKT FV+PM+ H + GP+ LI+ P+RELA
Sbjct: 345 AIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELA 404
Query: 233 RQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAK 292
+Q +F P+ GY + + +GG + Q ++ G I++ATPGRLKDM+ K
Sbjct: 405 QQIETETRRFALPL---GY---KCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDK 458
Query: 293 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFD---------------------HFKAQR 331
+ + CRY+ +DEADR+VDLGFE D+ + D ++ R
Sbjct: 459 SILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWR 518
Query: 332 QTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYV----KQEAKIVYLL 387
T LFSATMP ++ AR L+KP TV +G AG A V Q VE+V K++A+++ +L
Sbjct: 519 VTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEIL 578
Query: 388 ECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDV 447
+ PPP+++F K D + +Y+ G+ V +H GK QE+RE A+ + + G+ V
Sbjct: 579 RTI-GLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEISV 637
Query: 448 LVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTL 507
LVATD+A +G+D PD+ VIN+ M IE YVHRIGRTGR GKTG+A TF+ N + +
Sbjct: 638 LVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLT-NDDDEVM 696
Query: 508 LDLKHLLQEAK-QRIPPVLA 526
DL+ ++++K ++ P LA
Sbjct: 697 YDLRIEVEKSKMSKMNPELA 716
>sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP28 PE=3 SV=1
Length = 738
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 255/440 (57%), Gaps = 34/440 (7%)
Query: 113 PIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQ 172
P+ M ++ + R+ + I G IP P++N+++ P IL ++ G +P+PIQ Q
Sbjct: 285 PLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQ 344
Query: 173 GLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELA 232
+P+ + RD+IG+A TGSGKT FV+PM+ H + GP+ LI+ P+RELA
Sbjct: 345 AIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELA 404
Query: 233 RQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAK 292
+Q +F P+ GY + + +GG + Q ++ G I++ATPGRLKDM+ K
Sbjct: 405 QQIETETRRFALPL---GY---KCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDK 458
Query: 293 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFD---------------------HFKAQR 331
+ + CRY+ +DEADR+VDLGFE D+ + D ++ R
Sbjct: 459 SILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWR 518
Query: 332 QTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYV----KQEAKIVYLL 387
T LFSATMP ++ AR L+KP TV +G AG A V Q VE+V K++A+++ +L
Sbjct: 519 VTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEIL 578
Query: 388 ECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDV 447
+ PPP+++F K D + +Y+ G+ V +H GK QE+RE A+ + + G+ V
Sbjct: 579 RTI-GLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEISV 637
Query: 448 LVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTL 507
LVATD+A +G+D PD+ VIN+ M IE YVHRIGRTGR GKTG+A TF+ N + +
Sbjct: 638 LVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLT-NDDDEVM 696
Query: 508 LDLKHLLQEAK-QRIPPVLA 526
DL+ ++++K ++ P LA
Sbjct: 697 YDLRIEVEKSKMSKMNPELA 716
>sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium
discoideum GN=ddx17 PE=3 SV=1
Length = 785
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 240/419 (57%), Gaps = 13/419 (3%)
Query: 114 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQG 173
+ + +++ + R + + V G ++PPPI F FP ++K++ G PTPIQ Q
Sbjct: 355 VSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQA 414
Query: 174 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELAR 233
P+ L GRD+IG+A TGSGKTL F+LP I+ H + +GP L++ P+RELA
Sbjct: 415 WPIALKGRDIIGLAKTGSGKTLAFLLPSIV---HINAQPVLREDDGPIVLVLAPTRELAL 471
Query: 234 QTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKK 293
Q E +F G + GG +Q+ +K+GV IV+ATPGRL D+L
Sbjct: 472 QIQEETNKF------GGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESG 525
Query: 294 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 353
K NL YL LDEADR++D+GFE IR++ + RQTL+FSAT P ++Q A L
Sbjct: 526 KTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLT 585
Query: 354 KPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQKT--PPPVLIFCENKADVDDI 410
+ V++G AN +V Q VE + K +L L V++F E + VDD+
Sbjct: 586 DHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDDL 645
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
L G +++ +HG K Q ER++ +S FK G +++ATDVAS+GLD DI++V+NYD
Sbjct: 646 QRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYD 705
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 529
P IE Y+HRIGRT R G +G++ + + + + +L +L EAKQ+IP L+ L+
Sbjct: 706 FPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLA-NELIKVLTEAKQKIPIELSNLS 763
>sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23
PE=1 SV=3
Length = 820
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 252/447 (56%), Gaps = 44/447 (9%)
Query: 117 MSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPV 176
M+ + + R+ + I G IP PI+++KD P IL+ + G +PTPIQ Q +P+
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 177 VLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIV-----PGEGPFCLIVCPSREL 231
L RD+IG+A TGSGKT F++P+++ +P + +GP+ +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWIT----TLPKIDRIEESDQGPYAIILAPTREL 480
Query: 232 ARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLA 291
A+Q E +F P+ +RT+ IGG+ Q ++ G IV+ATPGRL D+L
Sbjct: 481 AQQIEEETIKFGKPL------GIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLE 534
Query: 292 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQ--------------------- 330
+ + L C Y+ LDEADR++D+GFE D++++ +H
Sbjct: 535 NRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFES 594
Query: 331 -----RQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVY 385
RQT++F+ATMP ++ ARS L +P V +G AG + V Q+V + + K
Sbjct: 595 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKK 654
Query: 386 LLECL-QKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGK 444
LL L Q PP++IF K D + + L G A +HGGK QE+RE+A+S+ KAG
Sbjct: 655 LLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGA 714
Query: 445 KDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSE 504
KD+LVATDVA +G+D D+ V+NYDM IE+Y+HRIGRTGR GK+G+A TF+ K S
Sbjct: 715 KDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDS- 773
Query: 505 TTLLDLKH-LLQEAKQRIPPVLAELND 530
+LK +L+ PP LA D
Sbjct: 774 AVFYELKQAILESPVSSCPPELANHPD 800
>sp|A3LQW7|DBP2_PICST ATP-dependent RNA helicase DBP2 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP2 PE=3 SV=1
Length = 530
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 241/417 (57%), Gaps = 15/417 (3%)
Query: 118 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVV 177
S K R + + G DIP PI F + FPE +L ++KA+G PT IQ QG P+
Sbjct: 72 SDKDIAAFRNEHQMSCLGSDIPHPITTFDEAGFPEYVLNEVKAQGFPSPTAIQCQGWPMA 131
Query: 178 LSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYE 237
LSGRDM+GIA TGSGKTL + LP I+ H + PG+GP L++ P+RELA Q +
Sbjct: 132 LSGRDMVGIAATGSGKTLSYCLPAIV---HINAQPLLSPGDGPVVLVLAPTRELAVQIQQ 188
Query: 238 VVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNL 297
+F + R +R GG Q+ + RGV IV+ATPGRL DML K NL
Sbjct: 189 ECSKFGSSSR------IRNTCVYGGAPKGQQIRDLARGVEIVIATPGRLIDMLEMGKTNL 242
Query: 298 DNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVT 357
YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++QN AR L P+
Sbjct: 243 KRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLQDPIQ 302
Query: 358 VNVGRAGAANLDVIQEV-----EYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 412
V +G A I +V EY K++ + +L + VLIF K D++
Sbjct: 303 VRIGSLELAASHTITQVVEVISEYEKRDRLVKHLETATTEKESKVLIFASTKKTCDEVTS 362
Query: 413 YLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMP 472
YL G A+A+HG K Q ER++ + FK GK ++VATDVA++G+D I VIN+DMP
Sbjct: 363 YLRADGWPALAIHGDKQQSERDWVLREFKTGKSPIMVATDVAARGIDVKGINFVINFDMP 422
Query: 473 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELN 529
IE+YVHRIGRTGR G TG A +F ++ DL +++EAKQ IPP L +
Sbjct: 423 GNIEDYVHRIGRTGRGGATGTAVSFFTDGNNKLG-GDLCKIMREAKQTIPPELQRFD 478
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 183/417 (43%), Positives = 241/417 (57%), Gaps = 16/417 (3%)
Query: 117 MSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPV 176
MS++ K I V G D+P PIK+F D FP ++ + +G +PT IQ Q LP+
Sbjct: 193 MSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPI 252
Query: 177 VLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTY 236
VLSGRD+IGIA TGSGKT FVLPMI+ M + + EGP ++ P+RELA Q Y
Sbjct: 253 VLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEK---EEGPIGVVCAPTRELAHQIY 309
Query: 237 EVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMN 296
++F P +LR GGV Q + +K G IV+ATPGRL D+L K +
Sbjct: 310 LEAKKFAKPY------NLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK 363
Query: 297 LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPV 356
+ YL LDEADR+ DLGFE IR + + RQTLLFSATMP K++ AR L P+
Sbjct: 364 MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPI 423
Query: 357 TVNVGRAGAANLDVIQEVEYVKQEA-KIVYLLECLQKT--PPPVLIFCENKADVDDIHEY 413
V VG+ G+AN D+ Q V + +A K+ +LLE L VL+F KA VD+I
Sbjct: 424 RVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQ 483
Query: 414 LLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPA 473
L +G A+HG KDQ R + FK+G VLVATDVA++GLD I+ V+N+D+
Sbjct: 484 LNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAK 543
Query: 474 EIENYVHRIGRTGRCG-KTGIATTFINKNQSETTLL-DLKHLLQEAKQRIPPVLAEL 528
E++ ++HRIGRTGR G K G A T I Q E +L H L A Q +P L +L
Sbjct: 544 EMDMHIHRIGRTGRAGDKDGTAYTLI--TQKEVRFAGELVHCLIAAGQDVPNELMDL 598
>sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5
PE=1 SV=2
Length = 614
Score = 305 bits (781), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 247/418 (59%), Gaps = 15/418 (3%)
Query: 116 RMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLP 175
R + + D R+ I V G + P P+ NF + FP ++ + + +PT IQ QG P
Sbjct: 67 RRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWP 126
Query: 176 VVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQT 235
V LSG DM+G+A TGSGKTL ++LP I+ H+ + G+GP CL++ P+RELA+Q
Sbjct: 127 VALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER---GDGPICLVLAPTRELAQQV 183
Query: 236 YEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKM 295
+V ++ R L++ GG Q+ ++RGV I +ATPGRL D L K
Sbjct: 184 QQVAAEYCRACR------LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKT 237
Query: 296 NLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKP 355
NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L
Sbjct: 238 NLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDY 297
Query: 356 VTVNVGRAG-AANLDVIQEVEY---VKQEAKIVYLLE-CLQKTPPPVLIFCENKADVDDI 410
+ +N+G +AN +++Q V+ V+++ K++ L+E + + ++F E K D++
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDEL 357
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
+ G A+ +HG K Q+ER++ ++ FK GK +L+ATDVAS+GLD D++ VINYD
Sbjct: 358 TRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYD 417
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
P E+Y+HRIGRT R KTG A TF N + + DL +L+EA Q I P L +L
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIK-QVSDLISVLREANQAINPKLLQL 474
>sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-5 PE=3 SV=1
Length = 1194
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/484 (37%), Positives = 264/484 (54%), Gaps = 27/484 (5%)
Query: 108 WKPPLPIRRMSKKACDLIRKQWH-IIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQP 166
W P + MS++ +R + I V G++IP P++ + PIL +++ G +P
Sbjct: 525 WVEPYELSHMSEEELAELRLELDGIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKP 584
Query: 167 TPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVC 226
TPIQ+Q LPV++SGRD+IG+A TGSGKT+ F LPM+ H + P+ +G LI+
Sbjct: 585 TPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLR---HVKDQDPVTGDDGAIALIMT 641
Query: 227 PSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRL 286
P+REL Q Y ++ F ++ LR + GG ++ Q+ +KRG I+VATPGRL
Sbjct: 642 PTRELCTQIYSDLQPFAKALK------LRVVAAYGGNAIKDQIAELKRGAEIIVATPGRL 695
Query: 287 KDMLAK---KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTK 343
D+LA + NL YL LDEADR+ D+GFE + ++F++ + RQT+LFSATMP
Sbjct: 696 IDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRI 755
Query: 344 IQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPP-----VL 398
I + L PV + VG ++ Q VE + + K LLE L + L
Sbjct: 756 IDALTKKVLRDPVEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGELYADDDDVRSL 815
Query: 399 IFCENKADVDDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGL 458
IF E + DD+ LL +G +++HGGKDQE+R IS FK G +L+AT +A++GL
Sbjct: 816 IFVERQEKADDLLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGL 875
Query: 459 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAK 518
D ++ VINYD P +E+YVHR GRTGR G TG A TFI + Q E + L+++
Sbjct: 876 DVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQ-ENCASGIAKALEQSG 934
Query: 519 QRIPPVLAELNDPMEDVDAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDY 578
Q +P L E+ ++ A K + GG G KL+ + A R+ +
Sbjct: 935 QPVPDRLNEMRKAWKEK---VKAGKAKDASGFGGKG-----LEKLDKDREAARMRERKTH 986
Query: 579 FGSG 582
G
Sbjct: 987 KAEG 990
>sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5
PE=2 SV=1
Length = 614
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 247/418 (59%), Gaps = 15/418 (3%)
Query: 116 RMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLP 175
R + + + R+ I V G + P P+ NF + FP ++ + + +PT IQ QG P
Sbjct: 67 RRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWP 126
Query: 176 VVLSGRDMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQT 235
V LSG DM+G+A TGSGKTL ++LP I+ H+ + G+GP CL++ P+RELA+Q
Sbjct: 127 VALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER---GDGPICLVLAPTRELAQQV 183
Query: 236 YEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKM 295
+V ++ R L++ GG Q+ ++RGV I +ATPGRL D L K
Sbjct: 184 QQVAAEYCRACR------LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKT 237
Query: 296 NLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKP 355
NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L
Sbjct: 238 NLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDY 297
Query: 356 VTVNVGRAG-AANLDVIQEVEY---VKQEAKIVYLLE-CLQKTPPPVLIFCENKADVDDI 410
+ +N+G +AN +++Q V+ V+++ K++ L+E + + ++F E K D++
Sbjct: 298 IHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDEL 357
Query: 411 HEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYD 470
+ G A+ +HG K Q+ER++ ++ FK GK +L+ATDVAS+GLD D++ VINYD
Sbjct: 358 TRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYD 417
Query: 471 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528
P E+Y+HRIGRT R KTG A TF N + + DL +L+EA Q I P L +L
Sbjct: 418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIK-QVSDLISVLREANQAINPKLLQL 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 220,579,079
Number of Sequences: 539616
Number of extensions: 9662888
Number of successful extensions: 37943
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 31216
Number of HSP's gapped (non-prelim): 2753
length of query: 588
length of database: 191,569,459
effective HSP length: 123
effective length of query: 465
effective length of database: 125,196,691
effective search space: 58216461315
effective search space used: 58216461315
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)