Query 007832
Match_columns 588
No_of_seqs 334 out of 1338
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 15:56:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007832.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007832hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02829 Probable galacturonos 100.0 7E-162 2E-166 1314.2 41.8 579 1-588 3-639 (639)
2 PLN02718 Probable galacturonos 100.0 5E-135 1E-139 1105.9 41.7 542 1-587 6-602 (603)
3 PLN02910 polygalacturonate 4-a 100.0 2E-134 4E-139 1098.2 36.3 463 125-587 190-656 (657)
4 PLN02742 Probable galacturonos 100.0 2E-132 5E-137 1073.5 38.8 475 113-587 55-534 (534)
5 PLN02769 Probable galacturonos 100.0 2E-125 4E-130 1035.2 41.7 453 125-587 174-629 (629)
6 PLN02870 Probable galacturonos 100.0 3E-111 7E-116 907.8 30.5 422 157-587 89-531 (533)
7 PLN02523 galacturonosyltransfe 100.0 4E-109 8E-114 894.1 35.1 458 130-588 80-559 (559)
8 PLN02867 Probable galacturonos 100.0 1E-109 3E-114 898.2 30.5 422 166-587 94-534 (535)
9 PLN02659 Probable galacturonos 100.0 4E-109 9E-114 891.5 30.9 422 157-587 89-532 (534)
10 cd06429 GT8_like_1 GT8_like_1 100.0 2.2E-56 4.8E-61 454.2 22.6 255 281-575 1-257 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 6.1E-42 1.3E-46 360.4 21.4 256 278-581 23-292 (334)
12 cd06431 GT8_LARGE_C LARGE cata 100.0 1.8E-40 4E-45 341.5 19.6 258 283-583 5-277 (280)
13 cd00505 Glyco_transf_8 Members 100.0 2.1E-38 4.6E-43 318.5 19.9 237 281-560 1-246 (246)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 8.6E-38 1.9E-42 313.3 17.6 237 281-559 1-247 (248)
15 COG1442 RfaJ Lipopolysaccharid 100.0 2.4E-36 5.3E-41 315.6 20.1 258 280-581 2-267 (325)
16 PF01501 Glyco_transf_8: Glyco 100.0 7.3E-35 1.6E-39 286.3 15.4 243 282-561 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 2.2E-31 4.7E-36 275.8 18.8 249 281-577 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 5E-31 1.1E-35 267.2 16.2 231 281-554 1-240 (248)
19 cd02537 GT8_Glycogenin Glycoge 99.9 5.9E-24 1.3E-28 214.0 17.1 219 283-574 3-237 (240)
20 PLN00176 galactinol synthase 99.9 6.1E-23 1.3E-27 215.7 18.9 170 392-576 100-293 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.7 1E-17 2.2E-22 172.7 7.8 141 388-562 76-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.0 1.2E-09 2.6E-14 128.0 8.4 255 277-575 1178-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 97.7 1.7E-05 3.6E-10 82.5 2.2 89 393-484 156-273 (368)
24 PLN03182 xyloglucan 6-xylosylt 95.4 0.081 1.8E-06 57.8 9.8 161 386-571 179-375 (429)
25 PF03407 Nucleotid_trans: Nucl 94.7 0.061 1.3E-06 52.9 6.1 143 389-554 48-202 (212)
26 PLN03181 glycosyltransferase; 88.6 1.6 3.5E-05 48.1 8.2 35 386-421 180-214 (453)
27 PF11051 Mannosyl_trans3: Mann 75.3 8.9 0.00019 39.8 7.3 35 395-429 80-114 (271)
28 COG4575 ElaB Uncharacterized c 73.1 13 0.00029 33.6 6.7 75 157-233 11-86 (104)
29 PF10819 DUF2564: Protein of u 67.5 15 0.00032 31.7 5.5 69 161-230 6-78 (79)
30 PF05637 Glyco_transf_34: gala 66.0 3.9 8.4E-05 41.9 2.1 23 403-425 74-96 (239)
31 PRK10132 hypothetical protein; 59.7 44 0.00095 30.5 7.5 77 157-235 15-91 (108)
32 KOG1928 Alpha-1,4-N-acetylgluc 58.2 5 0.00011 43.9 1.4 32 392-427 228-259 (409)
33 KOG1950 Glycosyl transferase, 56.3 24 0.00051 38.4 6.2 28 403-430 122-149 (369)
34 PLN02829 Probable galacturonos 51.5 1.2E+02 0.0026 35.6 10.9 69 156-224 181-251 (639)
35 TIGR02977 phageshock_pspA phag 41.1 69 0.0015 32.3 6.4 107 128-234 27-137 (219)
36 PRK10807 paraquat-inducible pr 37.8 97 0.0021 35.8 7.6 46 182-231 473-518 (547)
37 PF04488 Gly_transf_sug: Glyco 36.2 19 0.0004 31.7 1.2 35 387-425 61-96 (103)
38 cd02514 GT13_GLCNAC-TI GT13_GL 35.2 1.6E+02 0.0035 31.9 8.4 113 282-427 3-119 (334)
39 PF03071 GNT-I: GNT-I family; 33.8 85 0.0018 35.3 6.1 42 387-428 171-214 (434)
40 PRK10404 hypothetical protein; 30.5 2.1E+02 0.0046 25.7 7.0 80 153-234 4-84 (101)
41 PF06785 UPF0242: Uncharacteri 29.5 2.5E+02 0.0055 30.7 8.4 105 135-241 109-225 (401)
42 PF04012 PspA_IM30: PspA/IM30 29.2 1.7E+02 0.0036 29.2 6.9 109 128-236 26-138 (221)
43 PF03314 DUF273: Protein of un 26.9 41 0.00089 34.3 2.0 25 397-421 33-57 (222)
44 cd00761 Glyco_tranf_GTA_type G 24.9 4.2E+02 0.0092 22.3 9.6 38 285-324 4-41 (156)
45 PRK15384 type III secretion sy 24.2 38 0.00082 35.3 1.2 83 153-236 69-156 (336)
46 PRK15383 type III secretion sy 23.9 40 0.00086 35.1 1.3 87 150-237 67-158 (335)
47 PF05957 DUF883: Bacterial pro 23.9 2.5E+02 0.0053 24.3 6.1 77 158-236 2-79 (94)
48 PRK15382 non-LEE encoded effec 23.8 40 0.00087 35.1 1.3 89 150-239 61-154 (326)
49 PF06103 DUF948: Bacterial pro 23.6 1.8E+02 0.0039 24.9 5.2 61 159-225 20-80 (90)
50 PHA01346 hypothetical protein 23.2 2.3E+02 0.005 21.9 4.9 42 156-200 5-47 (53)
51 PRK10698 phage shock protein P 22.7 2.2E+02 0.0047 29.0 6.4 107 128-236 27-139 (222)
52 PF11464 Rbsn: Rabenosyn Rab b 22.1 1.2E+02 0.0026 23.3 3.3 38 137-174 1-38 (42)
53 PF10146 zf-C4H2: Zinc finger- 21.2 3E+02 0.0065 28.4 7.0 89 141-232 15-103 (230)
54 COG1842 PspA Phage shock prote 20.8 8.5E+02 0.018 25.0 10.2 46 185-230 88-133 (225)
No 1
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=7.2e-162 Score=1314.17 Aligned_cols=579 Identities=79% Similarity=1.245 Sum_probs=556.9
Q ss_pred CcchhHHHHHHHHHHhhceeeeecccccc---------------------------------------------------
Q 007832 1 MKTRNLVVGMLCATVLAPILIFTSTFKDS--------------------------------------------------- 29 (588)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 29 (588)
|+.|++||+|||+||+|||+|||+||+.+
T Consensus 3 ~~~r~~~~~~l~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lk~p~~~~~~~~~~~~ 82 (639)
T PLN02829 3 MRLRNLVLGLLLLTVLSPILLYTDRLSASFTPSSKRDFLEDVTALTLGGDASKLNVLPQESSSSLKEPIGIVYSDNSSKT 82 (639)
T ss_pred HHHHHHHHHHHHHHHhhceeEEecccccccCCcchhhhhHHHHhhccCccchhcccccccccccccCceeEEeecccccc
Confidence 57899999999999999999999999862
Q ss_pred -------CCCCcchhhhhcccccccccCCCcCCCCccchhhhccchhccccchhhhhhhhcccccccccccccccccccc
Q 007832 30 -------YPSSWSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQE 102 (588)
Q Consensus 30 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (588)
||+.+++||+ +||||+|+|+ ++|++|++|+|||+.++|.. +. ...+++.+.+.++..++++.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~ 153 (639)
T PLN02829 83 IEPDSQDLLLDKRGEHK-ARVLSATDDD-THSQTDDIIKQVTQKAGQDD--SD-----QQEKNSQSQSASQAESLEHVQQ 153 (639)
T ss_pred ccccccccccccccchh-hhhccccccc-cccccchhHHHhhhcccccc--cc-----cccccccccccccccchhhhhh
Confidence 2247788999 9999999777 99999999999999888733 22 2256788889999999999999
Q ss_pred ccccccccccCCccccccccccCCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCC
Q 007832 103 SSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSD 182 (588)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~ 182 (588)
+++++++.++++|...+|+|+|++++|+|++||+|||||||||||++|||++||++|+||||++|||+||+||+|+.|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~d~~ 233 (639)
T PLN02829 154 SAQTSEKVDEKEPLLTKTDKQTDQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASKDSD 233 (639)
T ss_pred hhccccccccccccccccccccccccCchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccccchhhhcC
Q 007832 183 LPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTL 262 (588)
Q Consensus 183 ~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~ 262 (588)
||+++.++|++|+++|++||+++|||+++++|||||++++|||+++||+|++|++||||+|+|||||||+||||+|||.+
T Consensus 234 lp~~~~~~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey~~~ 313 (639)
T PLN02829 234 LPKNANEKLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEYYNL 313 (639)
T ss_pred CChhHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEee
Q 007832 263 NSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQN 342 (588)
Q Consensus 263 ~~~~~~~~~~~~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~n 342 (588)
++.++++|++++++||+++|||+|||||+|++|||||++.|+++|+++|||||||++||.+|++||+.||+++|+|+|+|
T Consensus 314 ~~~~~~~p~~~~l~dp~l~Hy~ifSdNVLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~n 393 (639)
T PLN02829 314 NSSEQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQN 393 (639)
T ss_pred ChhhccCCChhhccCCccceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcccchhhhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCc
Q 007832 343 IEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL 422 (588)
Q Consensus 343 ie~f~~L~~~y~p~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DL 422 (588)
+++|+|++.+|+|+++|++++++++|||+.+..++..++++|+|+|+|+++|+|||||++||+++||||||+||||++||
T Consensus 394 ie~f~wln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDL 473 (639)
T PLN02829 394 IEEFTWLNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDL 473 (639)
T ss_pred hhhcccccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCCh
Confidence 99999999999999999999999999998877666778999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCeeEeeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCcc
Q 007832 423 SGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQ 502 (588)
Q Consensus 423 seLw~iDL~g~viaAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~ 502 (588)
++||++||+|+++|||+||...|++|+.+++|++|.+..+|+++.||||+|||||||++||+++++++++.|++.+.++.
T Consensus 474 seLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~ 553 (639)
T PLN02829 474 TGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQ 553 (639)
T ss_pred HHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCc
Confidence 99999999999999999999888899999999999988899999999999999999999999999999999999888888
Q ss_pred CCCCCCCchhhhhhccCeeeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhh
Q 007832 503 LWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLR 582 (588)
Q Consensus 503 l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~ 582 (588)
+|++|+||+++++|+|++++||.+||++|+||++.+.++.+++|+||||+|++|||.+.++++|+++|.+|++++++||+
T Consensus 554 L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW~kYl~~~~~fl~ 633 (639)
T PLN02829 554 LWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQVYLR 633 (639)
T ss_pred cccccCCChHHHHhcCceEecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCcccchHHHHHHHhcCchHHH
Confidence 99999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred hccCCC
Q 007832 583 ECNINP 588 (588)
Q Consensus 583 ~cni~~ 588 (588)
+|||||
T Consensus 634 ~Cni~p 639 (639)
T PLN02829 634 ECNINP 639 (639)
T ss_pred hCCCCC
Confidence 999998
No 2
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=5.5e-135 Score=1105.93 Aligned_cols=542 Identities=46% Similarity=0.865 Sum_probs=481.8
Q ss_pred CcchhHHHHHHHHHHhhceeeeeccccccCCCCcc-------------------------------------hhhhhccc
Q 007832 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSWS-------------------------------------WEHKSARV 43 (588)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~ 43 (588)
|+.|++||+|||+||++||++||+||+.+-|..+. .++-+.++
T Consensus 6 ~~~r~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lk~~~~~~~~~~~~~~~ 85 (603)
T PLN02718 6 RWQRILILSLLSLSVFAPLIFVSNRLKSITPVGRKEFIEELSTIRYRTDDLRLSAIEQEEGEGLKGPKLVIYQDGDFNSV 85 (603)
T ss_pred HHHHHHHHHHHHHHHhhceeEeeccccccCccchhhhHHHHhhhccccCccccccccccccccccCceeEEeecCCcCcc
Confidence 46799999999999999999999999987441000 00111112
Q ss_pred ccccc-cC---C-----------CcCCCCccchhhhccchhccccchhhhhhhhcccccccccccccccccccccccccc
Q 007832 44 LSATT-NG---L-----------DQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKHQQESSLTYG 108 (588)
Q Consensus 44 ~~~~~-~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (588)
.+... |+ . ..-++|+.|+|||+.++++.+. ++..+++..|+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~- 146 (603)
T PLN02718 86 VSYNSSDKNNDSLESEVDGGNNHKPKEEQAQVSQKTTVSSSEEVQ------------------ISARDIQLNHKTQFNP- 146 (603)
T ss_pred ccccccccccchhhhhccCccccccchhcccchheeecccccccc------------------cchhhhhhhhhhccCC-
Confidence 11111 00 0 0125677788888766663311 1123334444443333
Q ss_pred ccccCCccccccccccCCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHH
Q 007832 109 VLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIAN 188 (588)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~ 188 (588)
.+...+++++|+.+.|+|++||+|||||||||||++|||++||++|+||||+||||+||+||+|+.|+|||+++.
T Consensus 147 -----~~~~~~~~~~~~~~~~~d~~v~~~~dql~~ak~y~~~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~lp~~~~ 221 (603)
T PLN02718 147 -----PTVKHEKNTRVQPRRATDEKVKEIRDKIIQAKAYLNLAPPGSNSQLVKELRLRTKELERAVGDATKDKDLSKSAL 221 (603)
T ss_pred -----CcccccccCcCCcccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhcccCCCCCCHhHH
Confidence 566788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccccchhhhcCCccCCC
Q 007832 189 DRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRH 268 (588)
Q Consensus 189 ~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~ 268 (588)
++|++|+++|++||+++|||++|++|||||++++|||+++||+|++|++||||+|+|||||||+||||+|||.+++++++
T Consensus 222 ~~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~PK~lhCL~~rLt~ey~~~~~~~~~ 301 (603)
T PLN02718 222 QRMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCLSMRLTAEYFALDPEKRQ 301 (603)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHhhCChhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhh
Q 007832 269 FPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTW 348 (588)
Q Consensus 269 ~~~~~~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~ 348 (588)
+|++++++||+.+|||+++||++++||+|+|++.|+.+|++++||||||++++++|+.||..++..+++|+|+++++|.|
T Consensus 302 ~~~~~~l~d~~~~Hia~~sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~ 381 (603)
T PLN02718 302 LPNQQRYNDPDLYHYVVFSDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNV 381 (603)
T ss_pred CCChhhccCCcceeEEEEcCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred hcccchhhhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhcc
Q 007832 349 LNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSI 428 (588)
Q Consensus 349 L~~~y~p~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~i 428 (588)
++.+|+++++++++ .+++|+|+++|+||+||++||+++||||||+|+||++||++||++
T Consensus 382 lp~~~~~~lk~l~s---------------------~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~i 440 (603)
T PLN02718 382 LPADYNSLLMKQNS---------------------HDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSL 440 (603)
T ss_pred ccccchhhhhhccc---------------------cccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcC
Confidence 99998887765431 246899999999999999999999999999999999999999999
Q ss_pred CCCCCeeEeeecccc---cccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCC
Q 007832 429 DLKGKVNGAVETCGE---TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWK 505 (588)
Q Consensus 429 DL~g~viaAVeDc~~---~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~d 505 (588)
||+|+++|||+||.. .+++++.+++|++|++..+|+++.||||+|||||||++||+++++++++.|++.+.++.+|+
T Consensus 441 Dl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~d 520 (603)
T PLN02718 441 DMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWK 520 (603)
T ss_pred CCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccC
Confidence 999999999999976 34566778999999988899999999999999999999999999999999999887778999
Q ss_pred CCCCchhhhhhccCeeeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhcc
Q 007832 506 LGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECN 585 (588)
Q Consensus 506 qg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cn 585 (588)
||+||+++++|+|++++||.+||++++||++.+....+++|+||||+|++|||++.+++.|+++|.+|++++++|+++||
T Consensus 521 qdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~~W~k~v~~~~~~l~~Cn 600 (603)
T PLN02718 521 AGSLPIGWLTFYNQTVALDKRWHVLGLGHESGVGASDIEQAAVIHYDGVMKPWLDIGIGKYKRYWNIHVPYHHPYLQQCN 600 (603)
T ss_pred cccccHHHHHhcCceeecChHHhccCccccccccccccCCCEEEEECCCCCccccCChhhHHHHHHhhcCCCChHHHhcC
Confidence 99999999999999999999999999999887777778999999999999999999999999999999999999999999
Q ss_pred CC
Q 007832 586 IN 587 (588)
Q Consensus 586 i~ 587 (588)
|+
T Consensus 601 ~~ 602 (603)
T PLN02718 601 IH 602 (603)
T ss_pred CC
Confidence 97
No 3
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=1.6e-134 Score=1098.16 Aligned_cols=463 Identities=59% Similarity=1.084 Sum_probs=449.3
Q ss_pred CCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccC
Q 007832 125 EQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQI 204 (588)
Q Consensus 125 ~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~ 204 (588)
-+++|+|++||+|||||||||||++|||++||++|+|||+++|||+||+||+|++|+|||+++.++|++||++|++||++
T Consensus 190 ~~~~~~d~~vk~lkDQl~~AkaY~~iak~~~~~~l~~eL~~~i~e~~r~ls~a~~d~dlp~~~~~k~~~M~~~l~~ak~~ 269 (657)
T PLN02910 190 YESPNSDSILKLMRDQIIMAKAYANIAKSNNVTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHVLSIAKDQ 269 (657)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhcccccccCchHHHHHHHHHHHHHHHHhc
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccccchhhhcCCccCCCCCCCCCCCCCCceEEE
Q 007832 205 QDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYA 284 (588)
Q Consensus 205 ~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~~~~~~l~D~~~iHIa 284 (588)
+|||++|++||||||+++|||+++||+|++||+||||+|+|||||||+||||+|||.+++.++++|++++++||+++|||
T Consensus 270 ~~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~~l~dp~l~Hy~ 349 (657)
T PLN02910 270 LYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKLEDPSLYHYA 349 (657)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhccCCcceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhhcccc
Q 007832 285 LFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQS 364 (588)
Q Consensus 285 ~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l~s~~ 364 (588)
+|||||+|++|||||++.|+++|+++|||||||++||.+|++||+.||+++++|+|+|+|+|+|++.+|+|+++|++++.
T Consensus 350 ifSDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~ 429 (657)
T PLN02910 350 IFSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESAR 429 (657)
T ss_pred EEecceeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecccccC----CCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeec
Q 007832 365 MIDYYFRAHRAN----SDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVET 440 (588)
Q Consensus 365 ~~~y~F~~~~~~----~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeD 440 (588)
+++|||..+... +..++++|+|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+|
T Consensus 430 ~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVed 509 (657)
T PLN02910 430 IKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVET 509 (657)
T ss_pred hhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecc
Confidence 999999864432 2347899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhhhccCe
Q 007832 441 CGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRT 520 (588)
Q Consensus 441 c~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~F~g~i 520 (588)
|...|+++..|++|++|.+...|++++||||+|||||||++||++++|+.++.|++.+.+..+|+||+|||++++|+|++
T Consensus 510 c~~~f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i 589 (657)
T PLN02910 510 CKESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLT 589 (657)
T ss_pred cchhhhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCce
Confidence 99888899999999999998899999999999999999999999999999999999988889999999999999999999
Q ss_pred eeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 521 YPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 521 ~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
++||.+||++|+||++.+..+.+++|+||||+|++|||++.++++|+++|.+|++++++|+++|||+
T Consensus 590 ~pLD~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~KPWl~l~i~~Yr~~W~kYl~~d~~fl~~Cni~ 656 (657)
T PLN02910 590 YPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAKYKPYWSRYVQYDNPYLQLCNIS 656 (657)
T ss_pred eecCchheecCCCCCcccccccccCcEEEEeCCCCCcccccCcccchHHHHHHccCCChHHHhCCCC
Confidence 9999999999999998888888999999999999999999999999999999999999999999997
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=2.3e-132 Score=1073.54 Aligned_cols=475 Identities=50% Similarity=0.886 Sum_probs=457.0
Q ss_pred CCccccccccccCCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCC--CchHHHH
Q 007832 113 KEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDL--PRIANDR 190 (588)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~--~~~~~~~ 190 (588)
.+..+.+.-+.|||++++|++||+|||||||||||++|||++||++|+||||++|||+||+||+|+.|+++ |+++.++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~l~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~~~~~~~~ 134 (534)
T PLN02742 55 KEEVNHEGLNFTEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPITVEEAEPI 134 (534)
T ss_pred ccccccccccchhhhcChHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Confidence 46667777788999999999999999999999999999999999999999999999999999999999887 3899999
Q ss_pred HHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccccchhhhcCCccCC---
Q 007832 191 LKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQR--- 267 (588)
Q Consensus 191 ~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~--- 267 (588)
|++|+++|++||+++|||+++++|||||++++|||+++||+|++|++||||+|+|||||||+||||+|||.+++.++
T Consensus 135 ~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~ 214 (534)
T PLN02742 135 IRDLAALIYQAQDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAE 214 (534)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998854
Q ss_pred CCCCCCCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhh
Q 007832 268 HFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFT 347 (588)
Q Consensus 268 ~~~~~~~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~ 347 (588)
+.|+.++++||+++|||+|||||+|++|||||++.|+++|+++|||||||+.++.+|++||..|++++++|+|+++++|+
T Consensus 215 ~~~~~~~l~d~~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~ 294 (534)
T PLN02742 215 EKRNSPRLVDNNLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFS 294 (534)
T ss_pred cccccccccCCCcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEecccc
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccchhhhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhc
Q 007832 348 WLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 427 (588)
Q Consensus 348 ~L~~~y~p~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~ 427 (588)
|++.+|+|+++|+++++++.|||.++..+...+.++++|+|+|+++|+||+||++||+++||||||+|+||++||++||+
T Consensus 295 wl~~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~ 374 (534)
T PLN02742 295 WLNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFS 374 (534)
T ss_pred ccccccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhc
Confidence 99999999999999999999999887755556778999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeEeeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCC
Q 007832 428 IDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLG 507 (588)
Q Consensus 428 iDL~g~viaAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg 507 (588)
+||+|+++|||+||+.+|++|.+|+||++|.++.+|+++.||||+|||||||++||++++|+.++.|++.+.+..+|+||
T Consensus 375 ~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~g 454 (534)
T PLN02742 375 IDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLG 454 (534)
T ss_pred CCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhcccccccccc
Confidence 99999999999999989999999999999999999999999999999999999999999999999999988888999999
Q ss_pred CCchhhhhhccCeeeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 508 TLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 508 ~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
+||+++++|+|++++||.+||+.|+||++.++.+.+++|+||||+|++|||.+.++++|+++|++|++++++|+++||||
T Consensus 455 aLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~fl~~Cni~ 534 (534)
T PLN02742 455 TLPPGLLTFYGLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPYLQQCNFH 534 (534)
T ss_pred ccchHHHHHcCcceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCHHHHhCCCC
Confidence 99999999999999999999999999998888888999999999999999999999999999999999999999999996
No 5
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1.7e-125 Score=1035.21 Aligned_cols=453 Identities=43% Similarity=0.756 Sum_probs=425.9
Q ss_pred CCCCCchhHHHhhhhHHHHHHhhc-cccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhcc
Q 007832 125 EQTTPPDFRVRQLKDQLIKAKVYL-SLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQ 203 (588)
Q Consensus 125 ~~~~~~d~~~~~~~dq~~~a~~y~-~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~ 203 (588)
-+++|+|++||+|||||||||||+ +|||++||++|+||||+||||+||+||||+.|+|||+++.++|++|+++|++||+
T Consensus 174 ~~~~~~d~~~~~l~Dql~~Ak~y~~~iak~~~~~~l~~el~~~i~e~~~~l~~~~~d~dlp~~~~~~~~~m~~~~~~ak~ 253 (629)
T PLN02769 174 HKEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSESITDADLPPFIQKKLEKMEQTIARAKS 253 (629)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHh
Confidence 345899999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccccchhhhcCCccCCCCCCCCCCCCCCceEE
Q 007832 204 IQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHY 283 (588)
Q Consensus 204 ~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~~~~~~l~D~~~iHI 283 (588)
++|||.+|++||||||++||||+++|++|++||+||||+|+|||||||+||||+|||.+++.++++|++++++||+++||
T Consensus 254 ~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~l~d~~l~Hy 333 (629)
T PLN02769 254 CPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKSSSLDMEDSNSEKFSDPSLRHY 333 (629)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhccCCchhhccCCccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhhccc
Q 007832 284 ALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQ 363 (588)
Q Consensus 284 a~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l~s~ 363 (588)
|+||||++|++||||||+.|+++|+++|||||||+.|+.+|++||+.|++++|+|+|+|+|+|+|.+. .+|+++|++++
T Consensus 334 ~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~-~~~~~~~l~~~ 412 (629)
T PLN02769 334 VIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDL-DKFALKQLSLP 412 (629)
T ss_pred EEEeccceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeeccc-chHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999654 58999999998
Q ss_pred cceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeecccc
Q 007832 364 SMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE 443 (588)
Q Consensus 364 ~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~ 443 (588)
+.++++|..+... ..++++++|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||..
T Consensus 413 ~~~~~~~~~~~~~---~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~ 489 (629)
T PLN02769 413 EEFRVSFRSVDNP---SSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGV 489 (629)
T ss_pred hhhhhhhccCCCC---chhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhh
Confidence 8888888765422 3456789999999999999999999999999999999999999999999999999999999986
Q ss_pred cccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcC--CccCCCCCCCchhhhhhccCee
Q 007832 444 TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTY 521 (588)
Q Consensus 444 ~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~--~~~l~dqg~Ln~~ll~F~g~i~ 521 (588)
.+.++..|++ ..+|+++.||||+|||||||++||+++++++++.|++.+. +...|++|+||++|++|+|+++
T Consensus 490 rl~~~~~yl~------~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~ 563 (629)
T PLN02769 490 RLGQLKNYLG------DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIY 563 (629)
T ss_pred hhhhhhhhhc------ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEE
Confidence 6555555543 2478889999999999999999999999999999987653 3567999999999999999999
Q ss_pred eccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 522 PLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 522 ~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
+||.+||++++||++.+..+.+++|+||||+|++|||++.+.++|+++||+|++++++|+++||||
T Consensus 564 ~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~~W~kYl~~~~~fl~~Cni~ 629 (629)
T PLN02769 564 PLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGIPKYKKYWKRFLNRDDRFMDECNVN 629 (629)
T ss_pred ECCHHHccccccccccccccccCCcEEEEECCCCCCccCCCCChHHHHHHHHhccCChHHhhCCCC
Confidence 999999999999988877778899999999999999999999999999999999999999999997
No 6
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=3.1e-111 Score=907.85 Aligned_cols=422 Identities=47% Similarity=0.857 Sum_probs=391.3
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 157 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFL 236 (588)
Q Consensus 157 ~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~ 236 (588)
.++.+||.+-+.|. .-+||+.|++||+++.+.|+ +||+.+|||+++++|||||++++|||++++|+|++|+
T Consensus 89 ~~~~~~~~~~l~~~--~~~~~~~d~~lp~s~~~~~~-------~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~ 159 (533)
T PLN02870 89 ERLVRDFYKILNEV--NTEEIPDGLKLPDSFSQLVS-------DMKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMN 159 (533)
T ss_pred hhhHHHHHHHHHHh--ccccccccccCChhHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37888999888884 67899999999998777666 7788999999999999999999999999999999999
Q ss_pred HHHhhccCCccccccccccchhhhcCCccCCCCCCCC---CCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEE
Q 007832 237 TQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFH 313 (588)
Q Consensus 237 ~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~~~~~---~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFH 313 (588)
+||||+|+|||||||+||||+|||.++..++++|++| +++||+++|||++||||+|++|||||++.|+++|+++|||
T Consensus 160 ~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VFH 239 (533)
T PLN02870 160 KHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKIVFH 239 (533)
T ss_pred HHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhcccCccceEEE
Confidence 9999999999999999999999999999988988766 8999999999999999999999999999999999999999
Q ss_pred EEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhhccccceeEEe-cccccC---C-------CCCcc
Q 007832 314 IVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYF-RAHRAN---S-------DSNLK 382 (588)
Q Consensus 314 Ivtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l~s~~~~~y~F-~~~~~~---~-------~~~lk 382 (588)
||||++|+.+|++||++||+++|+|+|+++|+|+||+.+|+|+++|++++.+++++| .++... + ..+++
T Consensus 240 vvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (533)
T PLN02870 240 VITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQ 319 (533)
T ss_pred EecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccc
Confidence 999999999999999999999999999999999999999999999999998866555 332211 1 23688
Q ss_pred cCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeeccccc-----ccccccccccCCc
Q 007832 383 FRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET-----FHRFDRYLNFSNP 457 (588)
Q Consensus 383 ~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~~-----~~r~~~yLn~s~p 457 (588)
+++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||... ++++..|+||++|
T Consensus 320 ~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p 399 (533)
T PLN02870 320 ARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHP 399 (533)
T ss_pred cCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999642 3567789999999
Q ss_pred ccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcC--CccCCCCCCCchhhhhhccCeeeccCccccccCCCC
Q 007832 458 LISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYN 535 (588)
Q Consensus 458 ~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~--~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~ 535 (588)
.+..+|+++.||||||||||||++||++++++++++|++.+. +..+||||+||++|++|+|++++||.+||++++||+
T Consensus 400 ~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~ 479 (533)
T PLN02870 400 LIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQ 479 (533)
T ss_pred hhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCc
Confidence 999999999999999999999999999999999999998764 347899999999999999999999999999999998
Q ss_pred CCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 536 PSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 536 ~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
+....+.+++|+||||+|++|||++.+.++|+.+|.+|++++++|+++|||+
T Consensus 480 ~~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~ 531 (533)
T PLN02870 480 SKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHIL 531 (533)
T ss_pred ccccccccCCcEEEEECCCCCCccccCccchhHHHHHHHccCchHhhhcCCC
Confidence 7766677889999999999999999999999999999999999999999997
No 7
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=3.7e-109 Score=894.07 Aligned_cols=458 Identities=50% Similarity=0.914 Sum_probs=415.5
Q ss_pred chhHHHhhhhHHHHHHhhccccc---cCC--chHHHHHHHHHHHHHHH-----h-hccc--CCC----CCCCchHHHHHH
Q 007832 130 PDFRVRQLKDQLIKAKVYLSLPA---MRN--NANFVRELRLRIKEVQR-----A-LGDA--TKD----SDLPRIANDRLK 192 (588)
Q Consensus 130 ~d~~~~~~~dq~~~a~~y~~~a~---~~~--~~~~~~el~~~~~e~~~-----~-~~~~--~~~----~~~~~~~~~~~~ 192 (588)
-|.+.|+-.|-..++-||.+.|. +.+ +.++-.||..+.-++.. . +++. +.| .+||+++.++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 159 (559)
T PLN02523 80 LDQIRKQADDHRTLVNAYAAYARKLKLDNSKLLRLFADLSRNFTDLISKPSYRALLSSDGSAIDEDVLRQFEKEVKERVK 159 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHHHHhhcCccccccccccCCcCchHHHhhcchhHHHHHH
Confidence 47899999999999999987773 111 22333466666655432 1 1111 111 348999999999
Q ss_pred HHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccccccccchhhhcCCccCCC--CC
Q 007832 193 AMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRH--FP 270 (588)
Q Consensus 193 ~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~--~~ 270 (588)
.|+++|++||+ .|||.++++|||+|++++|||++++|+|++|++||||+|+|||||||+||||+|||.+++.+++ .|
T Consensus 160 ~~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~ 238 (559)
T PLN02523 160 VARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDEGKP 238 (559)
T ss_pred HHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhccCCC
Confidence 99999999997 7899999999999999999999999999999999999999999999999999999999877544 45
Q ss_pred CCCCCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhc
Q 007832 271 NQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLN 350 (588)
Q Consensus 271 ~~~~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~ 350 (588)
++++++||+++|||+||||++|++|+|+||+.|+++|+++|||||||++|+++|++||..|++.+++|+|++|++|+|++
T Consensus 239 ~~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln 318 (559)
T PLN02523 239 PPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLN 318 (559)
T ss_pred cchhccCCCcceEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhccccceeEEecccccC---CCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhc
Q 007832 351 SSYSPVLKQLNSQSMIDYYFRAHRAN---SDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 427 (588)
Q Consensus 351 ~~y~p~l~~l~s~~~~~y~F~~~~~~---~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~ 427 (588)
.+|+|+++|+++++++.|+|.++... ...++++++|+|+|+++|+|||||++||+++||||||+||||++||++||+
T Consensus 319 ~~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~ 398 (559)
T PLN02523 319 SSYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWK 398 (559)
T ss_pred cccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHh
Confidence 99999999999999999999865432 124788999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeEeeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCC
Q 007832 428 IDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLG 507 (588)
Q Consensus 428 iDL~g~viaAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg 507 (588)
+||+|+++|||+||...+++|..+++|++|.+...|+++.||||+|||||||++||++++|++++.|.+.+.+..+|+||
T Consensus 399 iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dqd 478 (559)
T PLN02523 399 IDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLG 478 (559)
T ss_pred CcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccccccc
Confidence 99999999999999776788888999999998889999999999999999999999999999999898888778899999
Q ss_pred CCchhhhhhccCeeeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 508 TLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 508 ~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
+||+++++|+|++++||.+||++++||++.++.+.+++|+||||+|++|||++.++++|+++|++|++++++|+++|||+
T Consensus 479 aLpp~LivF~gri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~KPWle~~i~~yr~~W~kYl~~~~~fl~~Cn~~ 558 (559)
T PLN02523 479 TLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQFKPLWTKYVDYDMEFVQACNFG 558 (559)
T ss_pred ccchHHHHhcCceEecCchhhccCCccCCCccccccCCCEEEEECCCCCccccCCCCcchHHHHHHHccCCHHHHhCCCC
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred C
Q 007832 588 P 588 (588)
Q Consensus 588 ~ 588 (588)
|
T Consensus 559 ~ 559 (559)
T PLN02523 559 L 559 (559)
T ss_pred C
Confidence 7
No 8
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=1.4e-109 Score=898.15 Aligned_cols=422 Identities=41% Similarity=0.768 Sum_probs=388.3
Q ss_pred HHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007832 166 RIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLP 245 (588)
Q Consensus 166 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~~~~P 245 (588)
-.+|++|+|+||+.|+++|+.+.++.++|+++++++++.+|||+++++|||||++++|||++++|+|++|++||||+|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~~~~~~~~~laa~t~P 173 (535)
T PLN02867 94 LREELTRALVEAKEQDDGGRGTKGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSARQRESIYWHLASHGIP 173 (535)
T ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 34677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccchhhhcCCccCCCCCCCC---CCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHH
Q 007832 246 KGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYA 322 (588)
Q Consensus 246 k~lhcL~~rlt~ey~~~~~~~~~~~~~~---~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~ 322 (588)
||||||+||||+|||.++++++++|+++ +++||+++|||++||||+|++|||||++.|+++|+++|||||||++|+.
T Consensus 174 K~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~ 253 (535)
T PLN02867 174 KSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNAANPEKLVFHIVTDKKTYT 253 (535)
T ss_pred CCccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccH
Confidence 9999999999999999999999998776 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhhccccce-eEEeccc-------ccCCCCCcccCCCCCcchhhh
Q 007832 323 AMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI-DYYFRAH-------RANSDSNLKFRNPKYLSILNH 394 (588)
Q Consensus 323 ~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l~s~~~~-~y~F~~~-------~~~~~~~lk~r~~~yiS~~~y 394 (588)
+|++||+.||+++++|+|+++|+|+|++.+|+|++++++++.+. .++|... .....+++++++|+|+|+++|
T Consensus 254 aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnY 333 (535)
T PLN02867 254 PMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNH 333 (535)
T ss_pred HHHHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHH
Confidence 99999999999999999999999999999999999999987654 2222211 011234678899999999999
Q ss_pred HHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeecc--ccc---ccccccccccCCcccccCCCCCCCc
Q 007832 395 LRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETC--GET---FHRFDRYLNFSNPLISKNFDPRACG 469 (588)
Q Consensus 395 ~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc--~~~---~~r~~~yLn~s~p~i~~~f~~~~~y 469 (588)
+||+||++||+++||||||+||||++||++||++||+|+++|||.|+ ... .+++.+|+||++|.+..+|+++.||
T Consensus 334 lRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~~cY 413 (535)
T PLN02867 334 LRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQERCA 413 (535)
T ss_pred HHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCCCcc
Confidence 99999999999999999999999999999999999999999999874 322 2456789999999988899999999
Q ss_pred cccceeeeechHHHHhhHHHHHHHHHHHcCC--ccCCCCCCCchhhhhhccCeeeccCccccccCCCCCCC-CcccCCCc
Q 007832 470 WAYGMNIFDLDEWRRQNITDVYHTWQKMNHD--RQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSV-NQRDIERA 546 (588)
Q Consensus 470 FNSGVlLIDL~kWRk~nit~k~~~~~~~n~~--~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i-~~~~ie~~ 546 (588)
||||||||||++||++++++++++|++.+.. ..+|+||+||+++++|+|+|++||.+||+.++||++.. ..+.+++|
T Consensus 414 FNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~~~~~i~~p 493 (535)
T PLN02867 414 WLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVPREILESA 493 (535)
T ss_pred eecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCcccccchhhhcCCc
Confidence 9999999999999999999999999998754 46899999999999999999999999999999987642 33456899
Q ss_pred EEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 547 AVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 547 ~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
+||||+|++|||+++++++|+++|.+|++++++|+|+|||.
T Consensus 494 aIIHYnG~~KPW~e~~~~~yR~~W~kyl~~~~~fl~~cni~ 534 (535)
T PLN02867 494 AVLHFSGPAKPWLEIGFPEVRSLWYRHVNFSDKFIRKCRIM 534 (535)
T ss_pred EEEEECCCCCcccccCCCchhHHHHHhcCccchHHHhcccC
Confidence 99999999999999999999999999999999999999995
No 9
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=4.2e-109 Score=891.46 Aligned_cols=422 Identities=44% Similarity=0.828 Sum_probs=385.8
Q ss_pred hHHHHHHHHHHHH-HHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 157 ANFVRELRLRIKE-VQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLF 235 (588)
Q Consensus 157 ~~~~~el~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~ 235 (588)
.++.+||.+-+.| .. =.|...|.++|.+ |++++.++++.+|||.+|++|||||++++||+++++|+|+.+
T Consensus 89 ~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~~~k~~~~~ 159 (534)
T PLN02659 89 ANVPEVMYQVLEQPLS--NDELKGRSDIPQT-------LEEFMDEVKNSRSDARAFALKLREMVTLLEQRTRTAKIQEYL 159 (534)
T ss_pred cccHHHHHHHHHhhhc--ccccCCccccchH-------HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777666655 21 1266678888876 777777888899999999999999999999999999999999
Q ss_pred HHHHhhccCCccccccccccchhhhcCCccCCCCCCCC---CCCCCCceEEEEEcCcchhhhHHHHHHHhhcCCCCcEEE
Q 007832 236 LTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVF 312 (588)
Q Consensus 236 ~~~la~~~~Pk~lhcL~~rlt~ey~~~~~~~~~~~~~~---~l~D~~~iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivF 312 (588)
+.||||+|+|||||||+||||+|||++++.++++|+++ +++||+++|||+|||||+|+||||||++.|+++|+++||
T Consensus 160 ~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a~~p~~~VF 239 (534)
T PLN02659 160 YRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNALRPHKFVL 239 (534)
T ss_pred HHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhcccCccceEE
Confidence 88999999999999999999999999999999988766 799999999999999999999999999999999999999
Q ss_pred EEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhhccccceeEEeccccc----CC-------CCCc
Q 007832 313 HIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRA----NS-------DSNL 381 (588)
Q Consensus 313 HIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l~s~~~~~y~F~~~~~----~~-------~~~l 381 (588)
|||||++|+.+|++||+.||+++|+|+|+|+|+|+||+.+|+|+++|++++.+.+++|..+.. ++ ..++
T Consensus 240 HivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (534)
T PLN02659 240 HIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKL 319 (534)
T ss_pred EEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999974431 11 1357
Q ss_pred ccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeeccccc--c---cccccccccCC
Q 007832 382 KFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET--F---HRFDRYLNFSN 456 (588)
Q Consensus 382 k~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~~--~---~r~~~yLn~s~ 456 (588)
++++|+|+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||... + +++.+|++|++
T Consensus 320 ~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~ 399 (534)
T PLN02659 320 QALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSH 399 (534)
T ss_pred ccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccc
Confidence 789999999999999999999999999999999999999999999999999999999999642 2 56778899999
Q ss_pred cccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcC--CccCCCCCCCchhhhhhccCeeeccCccccccCCC
Q 007832 457 PLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGY 534 (588)
Q Consensus 457 p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~--~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~lgy 534 (588)
|.+...|+++.||||+|||||||++||++++++++++|++.+. +..+|+||+||++|++|+|++++||.+||+.++||
T Consensus 400 p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~ 479 (534)
T PLN02659 400 PLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGY 479 (534)
T ss_pred hhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCcc
Confidence 9988899999999999999999999999999999999998764 35679999999999999999999999999999999
Q ss_pred CCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchhhhccCC
Q 007832 535 NPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 587 (588)
Q Consensus 535 ~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl~~cni~ 587 (588)
++....+.+++|+||||+|++|||+++++++|+++|.+|++++++|+|+|||+
T Consensus 480 ~~~~~~~~i~~paIIHYnG~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~ 532 (534)
T PLN02659 480 QENTSLADAESAGVVHFNGRAKPWLDIAFPQLRPLWAKYIDSSDKFIKSCHIR 532 (534)
T ss_pred cccccccccCCcEEEEECCCCCccccccCCcchhHHHHHhccCCHHHHhcCCC
Confidence 87666667889999999999999999999999999999999999999999996
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=2.2e-56 Score=454.24 Aligned_cols=255 Identities=56% Similarity=0.998 Sum_probs=230.3
Q ss_pred eEEEEEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhh
Q 007832 281 FHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQL 360 (588)
Q Consensus 281 iHIa~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l 360 (588)
+|||+++||+++++|+++|++.|+++|.+++|||+||+++.+.|+.||..++..+++|++++++++.+.+..+.+.++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999999999999999999999999999999999999999999998888899999999998888777777778887
Q ss_pred ccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeec
Q 007832 361 NSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVET 440 (588)
Q Consensus 361 ~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeD 440 (588)
+++. ....++.++++++|.++|+||+||++||+++||||||+|+||++||++||++||+|+++|||+|
T Consensus 81 ~~~~------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d 148 (257)
T cd06429 81 ESEA------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET 148 (257)
T ss_pred hccc------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh
Confidence 7552 1234566788999999999999999999999999999999999999999999999999999987
Q ss_pred ccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCc--cCCCCCCCchhhhhhcc
Q 007832 441 CGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDR--QLWKLGTLPPGLITFWK 518 (588)
Q Consensus 441 c~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~--~l~dqg~Ln~~ll~F~g 518 (588)
|||||||||||++||++++++++++|++.+.+. .++++|+|+++|++|+|
T Consensus 149 ----------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~ 200 (257)
T cd06429 149 ----------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYG 200 (257)
T ss_pred ----------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccC
Confidence 589999999999999999999999999876543 56889999999999999
Q ss_pred CeeeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhc
Q 007832 519 RTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVD 575 (588)
Q Consensus 519 ~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~ 575 (588)
+++.||.+||++++||+.......+.+|+||||+|+.|||+..+.++|+++||+|++
T Consensus 201 ~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~w~~yl~ 257 (257)
T cd06429 201 LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257 (257)
T ss_pred eeEECChHHcccCCcccccccccccCCcEEEEECCCCCCcCCCCCChHHHHHHHHhC
Confidence 999999999999888876544455678999999999999999998999999999974
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=6.1e-42 Score=360.36 Aligned_cols=256 Identities=18% Similarity=0.265 Sum_probs=185.6
Q ss_pred CCceEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhh-CCCCCceEEEeecc--hhhhhccc
Q 007832 278 PRLFHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLA-NPPGRATVQVQNIE--EFTWLNSS 352 (588)
Q Consensus 278 ~~~iHIa~~sDn--vlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~-n~~~~atI~v~nie--~f~~L~~~ 352 (588)
+..+|||+++|. +.+++|+|+|++.|+++ ..+.|||++++++.+.++.+-.. ... +..|.+..++ .|+
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~-~~~i~~~~id~~~~~----- 95 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQY-NTRINIYLINCERLK----- 95 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEeCHHHHh-----
Confidence 478999999995 46899999999999875 47999999999998776544321 111 2334443322 111
Q ss_pred chhhhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCC
Q 007832 353 YSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLK 431 (588)
Q Consensus 353 y~p~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~-ldKVLYLD~DvIV~~DLseLw~iDL~ 431 (588)
.++...++|.++|+||+||++||+ ++||||||+|+||++||++||++||+
T Consensus 96 -----------------------------~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~ 146 (334)
T PRK15171 96 -----------------------------SLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFA 146 (334)
T ss_pred -----------------------------CCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCC
Confidence 011235789999999999999995 99999999999999999999999999
Q ss_pred CCeeEee-ecccccc-cccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcC--Cc-cCCCC
Q 007832 432 GKVNGAV-ETCGETF-HRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DR-QLWKL 506 (588)
Q Consensus 432 g~viaAV-eDc~~~~-~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~--~~-~l~dq 506 (588)
|..+||| .|+...+ ......++. | ++ ..+|||||||||||++||++++++++++++..+. .+ ...||
T Consensus 147 ~~~~aav~~d~~~~~~~~~~~~l~~--~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQ 218 (334)
T PRK15171 147 ENEIAAVVAEGDAEWWSKRAQSLQT--P----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQ 218 (334)
T ss_pred CCeEEEEEeccchhHHHHHHHhcCC--c----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecCh
Confidence 6666665 5543221 111111110 0 11 2469999999999999999999999999987542 22 23356
Q ss_pred CCCchhhhhhccCeeeccCccccccC-CCCCC--CCcccCCCcEEEEccCCCCCcccCCccchHHHHHHhhccCcchh
Q 007832 507 GTLPPGLITFWKRTYPLDRFWHVLGL-GYNPS--VNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYL 581 (588)
Q Consensus 507 g~Ln~~ll~F~g~i~~Ld~~WN~~~l-gy~~~--i~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kYl~~~~~fl 581 (588)
|.| |.+|.|+++.||.+||++.. .+... .......+|+||||+|+.|||+..+.++++++||+|... +||-
T Consensus 219 DiL---N~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~~~~~~~f~~~~~~-spw~ 292 (334)
T PRK15171 219 DVL---NILLAGKVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWADYPVSQYFLKAKEA-SPWK 292 (334)
T ss_pred hHH---HHHHcCCeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCCCchHHHHHHHHhc-CCCC
Confidence 655 57899999999999998742 11110 001123579999999999999988889999999999955 5664
No 12
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=1.8e-40 Score=341.50 Aligned_cols=258 Identities=23% Similarity=0.323 Sum_probs=184.0
Q ss_pred EEEEcCcc-hhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhhhhc
Q 007832 283 YALFSDNV-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLN 361 (588)
Q Consensus 283 Ia~~sDnv-laasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~~l~ 361 (588)
||++.+|+ .+++|+|+|+++|+. ..++|||++++++.+.++.+...-...+++|.+..++++. ..
T Consensus 5 iv~~~~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~---~~--------- 70 (280)
T cd06431 5 IVCAGYNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELK---SR--------- 70 (280)
T ss_pred EEEccCCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhh---hh---------
Confidence 55666775 789999999999985 3599999999999888777664333457788887765321 00
Q ss_pred cccceeEEecccccCCCCCcccCCCCCcch-hhhHHhhhhcccc-CCCeEEEEecCeeeccCchhhhcc--CCCC-CeeE
Q 007832 362 SQSMIDYYFRAHRANSDSNLKFRNPKYLSI-LNHLRFYLPEVFP-RLNKVLFLDDDVVVQKDLSGLWSI--DLKG-KVNG 436 (588)
Q Consensus 362 s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~-~~y~Rf~IPeIlP-~ldKVLYLD~DvIV~~DLseLw~i--DL~g-~via 436 (588)
+. ..++ .++|. .+|+||+||++|| +++||||||+|+||++||++||++ |+.| .++|
T Consensus 71 --------~~----------~~~~-~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a 131 (280)
T cd06431 71 --------VS----------WIPN-KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLG 131 (280)
T ss_pred --------hc----------cCcc-cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEE
Confidence 00 0011 23443 4889999999999 499999999999999999999998 6765 5777
Q ss_pred eeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcC----CccCCCCCCCchh
Q 007832 437 AVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH----DRQLWKLGTLPPG 512 (588)
Q Consensus 437 AVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~----~~~l~dqg~Ln~~ 512 (588)
||+|...-+. ... +. ....+.....|||||||||||++||++++++++..+.+.+. ...+.|||. +
T Consensus 132 ~v~~~~~~~~---~~~-~~---~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDi---L 201 (280)
T cd06431 132 LVENQSDWYL---GNL-WK---NHRPWPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDI---F 201 (280)
T ss_pred Eeccchhhhh---hhh-hh---ccCCCcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHH---H
Confidence 7777532111 000 00 00011112359999999999999999999999876655431 223345555 5
Q ss_pred hhhhccC---eeeccCccccccCCC-CCCCCcccCCCcEEEEccCCCCCcccCCc-cchHHHHHHhhccCcchhhh
Q 007832 513 LITFWKR---TYPLDRFWHVLGLGY-NPSVNQRDIERAAVIHYNGNMKPWLEINI-PKYRNYWTKHVDYDQLYLRE 583 (588)
Q Consensus 513 ll~F~g~---i~~Ld~~WN~~~lgy-~~~i~~~~ie~~~IIHY~G~~KPW~~~~~-~~y~~lW~kYl~~~~~fl~~ 583 (588)
|.+|.|+ ++.||++||++.... .........++|+||||+|+.|||...+. ++|+++|.+|++++++-||+
T Consensus 202 N~v~~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (280)
T cd06431 202 NAVIKQNPFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRR 277 (280)
T ss_pred HHHHcCCcceeEECCCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHHHHHHHHhcCchhhhh
Confidence 5789999 899999999985311 11111122468999999999999998875 89999999999999887764
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=2.1e-38 Score=318.53 Aligned_cols=237 Identities=20% Similarity=0.283 Sum_probs=172.8
Q ss_pred eEEEE-EcC-cc-hhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhh
Q 007832 281 FHYAL-FSD-NV-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL 357 (588)
Q Consensus 281 iHIa~-~sD-nv-laasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l 357 (588)
||||+ ++| ++ .+++|+++|+++|+++ .++|||++++++.+..+.+.......+.++++..++.-.+.
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~-------- 70 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSV-------- 70 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcc--------
Confidence 68877 555 44 6899999999999986 69999999999987665544322223556666554311000
Q ss_pred hhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEe
Q 007832 358 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGA 437 (588)
Q Consensus 358 ~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaA 437 (588)
.... ..++++..+|+||++|+++|+++||||||+|+||++||++||++|++|+++||
T Consensus 71 ----------------------~~~~-~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aa 127 (246)
T cd00505 71 ----------------------DSEH-LKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAA 127 (246)
T ss_pred ----------------------hhhh-hcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEE
Confidence 0000 12577889999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCC-ccCCCCCCCchhhhhh
Q 007832 438 VETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHD-RQLWKLGTLPPGLITF 516 (588)
Q Consensus 438 VeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~-~~l~dqg~Ln~~ll~F 516 (588)
|+||..... ..+.. ...+...+.+|||||||||||++||++++.+++.++...+.. ....||+.| |.+|
T Consensus 128 v~d~~~~~~--~~~~~-----~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~L---N~~~ 197 (246)
T cd00505 128 APDPGDRRE--GKYYR-----QKRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLL---NTFF 197 (246)
T ss_pred ccCchhhhc--cchhh-----cccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHH---HHHH
Confidence 999874211 01100 011333457899999999999999988888887776544332 233455555 5789
Q ss_pred ccC---eeeccCccccccCCCCCCCC--cccCCCcEEEEccCCCCCccc
Q 007832 517 WKR---TYPLDRFWHVLGLGYNPSVN--QRDIERAAVIHYNGNMKPWLE 560 (588)
Q Consensus 517 ~g~---i~~Ld~~WN~~~lgy~~~i~--~~~ie~~~IIHY~G~~KPW~~ 560 (588)
.++ +..||.+||++..++..... .+...+|+||||+|+.|||..
T Consensus 198 ~~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 198 KQVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred hcCCCeEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCCC
Confidence 998 99999999999766543211 234678999999999999963
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=8.6e-38 Score=313.30 Aligned_cols=237 Identities=20% Similarity=0.245 Sum_probs=177.3
Q ss_pred eEEEEEcCc-c-hhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhh
Q 007832 281 FHYALFSDN-V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 358 (588)
Q Consensus 281 iHIa~~sDn-v-laasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~ 358 (588)
+|||+++|. + .+++|+++|+++|+++ +.++|||++++++.+.++.....-...+..|++..++.-. ..
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~---------~~ 70 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDD---------FK 70 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHH---------Hh
Confidence 699999996 4 6899999999999986 4799999999988765443322111134556665543100 00
Q ss_pred hhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEee
Q 007832 359 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV 438 (588)
Q Consensus 359 ~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAV 438 (588)
.... ..++++..+|+||++|+++|+++||||||+|+||++||++||++|++|+++|||
T Consensus 71 ---------------------~~~~-~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~ 128 (248)
T cd04194 71 ---------------------FFPA-TTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAV 128 (248)
T ss_pred ---------------------cCCc-ccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEE
Confidence 0000 235678899999999999999999999999999999999999999999999999
Q ss_pred ecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhhhcc
Q 007832 439 ETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWK 518 (588)
Q Consensus 439 eDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~F~g 518 (588)
+||......... ...+.....+||||||||+|+++||+.+++++++++++.+..... .++|.++|.+|.+
T Consensus 129 ~d~~~~~~~~~~--------~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~--~~DQd~LN~~~~~ 198 (248)
T cd04194 129 RDPFIEQEKKRK--------RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLI--YPDQDILNAVLKD 198 (248)
T ss_pred ecccHHHHHHHH--------hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCcee--eCChHHHHHHHhC
Confidence 999753221110 011333567899999999999999999999999999987754222 2344455689999
Q ss_pred CeeeccCccccccCCCCCCC--------CcccCCCcEEEEccCCCCCcc
Q 007832 519 RTYPLDRFWHVLGLGYNPSV--------NQRDIERAAVIHYNGNMKPWL 559 (588)
Q Consensus 519 ~i~~Ld~~WN~~~lgy~~~i--------~~~~ie~~~IIHY~G~~KPW~ 559 (588)
++..||.+||++..++.... .....++|+||||+|+.|||.
T Consensus 199 ~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 199 KILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred CeEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 99999999999875443211 013457899999999999996
No 15
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=2.4e-36 Score=315.56 Aligned_cols=258 Identities=23% Similarity=0.297 Sum_probs=191.6
Q ss_pred ceEEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhh-CCC-CCceEEEeecchhhhhcccchh
Q 007832 280 LFHYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLA-NPP-GRATVQVQNIEEFTWLNSSYSP 355 (588)
Q Consensus 280 ~iHIa~~sDn--vlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~-n~~-~~atI~v~nie~f~~L~~~y~p 355 (588)
.++||+++|+ .++++|+|.|++.|++. -.+.||+++++++.+.++..-.. .++ ..+.+.+++++.|+ .+
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~----~~-- 74 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL----DY-- 74 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh----cc--
Confidence 5789999996 46899999999999996 37999999999999887665532 333 34455555554432 00
Q ss_pred hhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCee
Q 007832 356 VLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVN 435 (588)
Q Consensus 356 ~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~vi 435 (588)
+ +..+++|.++|+||+||++||+++|+||||+|+||+|||++||.+|++|+++
T Consensus 75 --------------------------~-~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~ 127 (325)
T COG1442 75 --------------------------P-PFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYL 127 (325)
T ss_pred --------------------------c-ccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceE
Confidence 0 0236788999999999999999999999999999999999999999999999
Q ss_pred EeeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhh
Q 007832 436 GAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLIT 515 (588)
Q Consensus 436 aAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~ 515 (588)
|||.|+...... ... ...........|||||||++|++.||+++++++++++++...+... .++|+++|++
T Consensus 128 aaV~D~~~~~~~--~~~-----~~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~--~~DQdiLN~i 198 (325)
T COG1442 128 AAVRDVFSHYMK--EGA-----LRLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLL--YPDQDILNMI 198 (325)
T ss_pred EEEeehhhhhhh--hhh-----hHhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccC--CccccHHHHH
Confidence 999998642111 000 0000112346789999999999999999999999999865543322 3445666789
Q ss_pred hccCeeeccCccccccCCCC-CCC--CcccCCCcEEEEccCCCCCcccCCccch-HHHHHHhhccCcchh
Q 007832 516 FWKRTYPLDRFWHVLGLGYN-PSV--NQRDIERAAVIHYNGNMKPWLEINIPKY-RNYWTKHVDYDQLYL 581 (588)
Q Consensus 516 F~g~i~~Ld~~WN~~~lgy~-~~i--~~~~ie~~~IIHY~G~~KPW~~~~~~~y-~~lW~kYl~~~~~fl 581 (588)
|+|++.+||.+||++...-. ... ....-.+|.|+||+|+.|||+..+.+.+ ..+|...+. .+||.
T Consensus 199 ~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~~w~~i~~-~~p~~ 267 (325)
T COG1442 199 FEDRVLELPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYPRSHEWHEILA-ETPWK 267 (325)
T ss_pred HHhhhhccCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCccccccHHHHHHHHHh-cCCcc
Confidence 99999999999999953211 110 0122357899999999999999987665 466776664 35554
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=7.3e-35 Score=286.33 Aligned_cols=243 Identities=25% Similarity=0.397 Sum_probs=162.3
Q ss_pred EEEEEcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCC-CCc-eEEEeecchhhhhcccchhhh
Q 007832 282 HYALFSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPP-GRA-TVQVQNIEEFTWLNSSYSPVL 357 (588)
Q Consensus 282 HIa~~sDn--vlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~-~~a-tI~v~nie~f~~L~~~y~p~l 357 (588)
|||+++|. +.+++|+++|++.|++++..++|||++++++.+..+........ ... .+...+... +
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~ 69 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISM-----------L 69 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGH-----------H
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHh-----------h
Confidence 89999996 46899999999999998779999999999988776554332211 111 111110000 0
Q ss_pred hhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEe
Q 007832 358 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGA 437 (588)
Q Consensus 358 ~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaA 437 (588)
. .+ ........+++..+|+||+++++||+++||||||+||||.+||++||+++++|+.+||
T Consensus 70 ~--------~~-----------~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a 130 (250)
T PF01501_consen 70 E--------EF-----------QFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAA 130 (250)
T ss_dssp H---------------------TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEE
T ss_pred h--------hh-----------hhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccc
Confidence 0 00 0011234678899999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhhhc
Q 007832 438 VETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFW 517 (588)
Q Consensus 438 VeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~F~ 517 (588)
++|+... . ......+..........+|||+||||+|+++||++++.+++..|++.+.. ....++|+.++.+|.
T Consensus 131 ~~~~~~~--~---~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~ 203 (250)
T PF01501_consen 131 VEDESFD--N---FPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFY 203 (250)
T ss_dssp EE----H--H---HHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHT
T ss_pred cccchhh--h---hhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhcc
Confidence 9993211 1 01111111111233458999999999999999999999999999876654 223456666778999
Q ss_pred cCeeeccCccccccCCCCCC--CCcccCCCcEEEEccCCCCCcccC
Q 007832 518 KRTYPLDRFWHVLGLGYNPS--VNQRDIERAAVIHYNGNMKPWLEI 561 (588)
Q Consensus 518 g~i~~Ld~~WN~~~lgy~~~--i~~~~ie~~~IIHY~G~~KPW~~~ 561 (588)
+++..||.+||+...++... ......++++||||+|..|||...
T Consensus 204 ~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 204 GNIKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp TGEEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred ceeEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 99999999999997655110 011334689999999999999865
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.97 E-value=2.2e-31 Score=275.82 Aligned_cols=249 Identities=15% Similarity=0.276 Sum_probs=166.1
Q ss_pred eEEEE-EcC-cchhhhHHHHHHHhhcCCCCcEEEEEEeCcc-cHHH---HHHHHhhCCCCCceEEEeecchhhhhcccch
Q 007832 281 FHYAL-FSD-NVLAAAVVVNSTVTHAKHPSNHVFHIVTDRL-NYAA---MRMWFLANPPGRATVQVQNIEEFTWLNSSYS 354 (588)
Q Consensus 281 iHIa~-~sD-nvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i-~~~~---mk~wf~~n~~~~atI~v~nie~f~~L~~~y~ 354 (588)
+|+|+ +++ +...+-|+|+|++.|+. ..++|||++|+. ..+. ++.|-.... ..+...+..
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~-~~i~~~i~~------------ 65 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELID-RKFNYTLHP------------ 65 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhcc-ceeeeEEEE------------
Confidence 47765 444 46679999999999985 469999999984 3322 445522110 111001111
Q ss_pred hhhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhcc--CCCC
Q 007832 355 PVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSI--DLKG 432 (588)
Q Consensus 355 p~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~i--DL~g 432 (588)
+.|+.... ..+ ++.+++.+|+||++|++||+++||||||+|+||.+||++||++ |++|
T Consensus 66 -------------I~~P~~~~-----~~w--s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~ 125 (304)
T cd06430 66 -------------ITFPSGNA-----AEW--KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNS 125 (304)
T ss_pred -------------EecCccch-----hhh--hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCC
Confidence 11211100 011 2356679999999999999999999999999999999999999 9998
Q ss_pred C-eeEeeeccccc-ccccccccccCCcccccCCCCCCCccccceeeeechHHHH-----------hhHHHHHHHHHHHcC
Q 007832 433 K-VNGAVETCGET-FHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRR-----------QNITDVYHTWQKMNH 499 (588)
Q Consensus 433 ~-viaAVeDc~~~-~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk-----------~nit~k~~~~~~~n~ 499 (588)
. ++|++++.... ...|. .+ ...++ .+..|||||||+|||++||+ .++++++..+++++.
T Consensus 126 ~~~aA~v~e~~~~~~~~~~---~~----~~~~~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
T cd06430 126 TQLAAMAPEHEEPNIGWYN---RF----ARHPY-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK 197 (304)
T ss_pred CeEEEEEecccccchhhhh---hh----cccCc-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc
Confidence 6 55555553210 00111 00 01112 12347999999999999999 788999999998776
Q ss_pred Ccc-CCCCCCCchhhhhhccC---eeeccCccccccCCCCCCCCcc--cCCCcEEEEccCCCCCcccCCccchHHHHHHh
Q 007832 500 DRQ-LWKLGTLPPGLITFWKR---TYPLDRFWHVLGLGYNPSVNQR--DIERAAVIHYNGNMKPWLEINIPKYRNYWTKH 573 (588)
Q Consensus 500 ~~~-l~dqg~Ln~~ll~F~g~---i~~Ld~~WN~~~lgy~~~i~~~--~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~kY 573 (588)
.+. +.|||. +|++|.++ ++.||++||++...+.++.+++ +.+.++|||++++.| .....+.|+.++.-.
T Consensus 198 ~~l~~~DQDi---LN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~--~~~~~~~f~~~~~~~ 272 (304)
T cd06430 198 LKITWGDQDL---INIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVY--HSDKQPAFRAVYEAI 272 (304)
T ss_pred cCCCCCCHHH---HHHHHcCCCCeEEEcCccccCCccceeecccccccccccceEEEcCCCCC--CCccchHHHHHHHHH
Confidence 443 335555 45788887 9999999998864333333343 346899999998766 444456688888887
Q ss_pred hccC
Q 007832 574 VDYD 577 (588)
Q Consensus 574 l~~~ 577 (588)
..|+
T Consensus 273 ~~~~ 276 (304)
T cd06430 273 REYT 276 (304)
T ss_pred Hhcc
Confidence 7776
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.97 E-value=5e-31 Score=267.21 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=155.9
Q ss_pred eEEEE-EcCc--chhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhh
Q 007832 281 FHYAL-FSDN--VLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL 357 (588)
Q Consensus 281 iHIa~-~sDn--vlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l 357 (588)
|||+. ++|+ ..+++|++.|++.|+. ..+.|||++++++.+..+..-..-...+..++++.++.-.|+..
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~~~~~~~------ 72 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPRWLHK------ 72 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecChhhhhc------
Confidence 56655 4444 3679999999999985 47999999999997765433221111244555554421111100
Q ss_pred hhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCCCCeeE
Q 007832 358 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNG 436 (588)
Q Consensus 358 ~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~-ldKVLYLD~DvIV~~DLseLw~iDL~g~via 436 (588)
.+...+ ...+|.|++++++||. ++||||||+|+||.+||++||++||+|+++|
T Consensus 73 -------------------------~~~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~A 126 (248)
T cd06432 73 -------------------------QTEKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYG 126 (248)
T ss_pred -------------------------ccccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEE
Confidence 000011 2467899999999995 9999999999999999999999999999999
Q ss_pred eeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHH---HcCCc-cCCCCCCCchh
Q 007832 437 AVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQK---MNHDR-QLWKLGTLPPG 512 (588)
Q Consensus 437 AVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~---~n~~~-~l~dqg~Ln~~ 512 (588)
||+||.... +......|.......++ .+..|||||||||||++||++++++++.++++ .+..+ ..+|||.||
T Consensus 127 av~d~~~~~-~~~~~~~~~~~~~~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN-- 202 (248)
T cd06432 127 YTPFCDSRK-EMDGFRFWKQGYWKSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPN-- 202 (248)
T ss_pred Eeeccccch-hcccchhhhhhhhhhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhH--
Confidence 999987421 10000000000000122 23569999999999999999999997776554 33322 346888877
Q ss_pred hhhhccC-eeeccCccccccCCCCCCCCcccCCCcEEEEccCC
Q 007832 513 LITFWKR-TYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGN 554 (588)
Q Consensus 513 ll~F~g~-i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~ 554 (588)
.++.+. +++||.+||++.. +. ..+..+.|.+|||..+
T Consensus 203 -~v~~~~~i~~Lp~~w~~~~~-~~---~~~~~~~~~~~~~~~~ 240 (248)
T cd06432 203 -NMQHQVPIFSLPQEWLWCET-WC---SDESKKKAKTIDLCNN 240 (248)
T ss_pred -HHhccCCeEECChHHHHHHH-Hh---cccccCccceeecccC
Confidence 578775 9999999999743 21 1233567999999764
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.91 E-value=5.9e-24 Score=213.97 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=144.5
Q ss_pred EEE-EcC-cc-hhhhHHHHHHHhhcCCCCcEEEEEE-eCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccchhhhh
Q 007832 283 YAL-FSD-NV-LAAAVVVNSTVTHAKHPSNHVFHIV-TDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 358 (588)
Q Consensus 283 Ia~-~sD-nv-laasVvI~Sil~Ns~~p~~ivFHIv-td~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y~p~l~ 358 (588)
+|. ++| ++ .+++|++.|+++|+++ +.+||+ +++++.+.++..-... . ++..++.++. +
T Consensus 3 y~t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~~----~--~~~~v~~i~~------~--- 64 (240)
T cd02537 3 YVTLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEVG----W--IVREVEPIDP------P--- 64 (240)
T ss_pred EEEEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHcC----C--EEEecCccCC------c---
Confidence 444 344 54 5899999999999874 344444 5678877655443211 1 2222221110 0
Q ss_pred hhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEee
Q 007832 359 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV 438 (588)
Q Consensus 359 ~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAV 438 (588)
. . . . .....++..+|.||+++++. +++||||||+|+||.+||++||++ +..+||+
T Consensus 65 -----------~--~-----~--~-~~~~~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~ 119 (240)
T cd02537 65 -----------D--S-----A--N-LLKRPRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAA 119 (240)
T ss_pred -----------c--h-----h--h-hccchHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeee
Confidence 0 0 0 0 00124566789999999975 699999999999999999999987 6778888
Q ss_pred ecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhhhcc
Q 007832 439 ETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWK 518 (588)
Q Consensus 439 eDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~F~g 518 (588)
.|+.. ..|||||||+|++.. ++.+.+.+++..+.. +..++|..+|.+|.+
T Consensus 120 ~d~~~-----------------------~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~ 169 (240)
T cd02537 120 PDCGW-----------------------PDLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSD 169 (240)
T ss_pred cccCc-----------------------cccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcC
Confidence 77521 258999999999964 455566666554433 223444445578999
Q ss_pred C--eeeccCccccccCCCCCCCC-cccCCCcEEEEccCCCCCcccCCcc---------chHHHHHHhh
Q 007832 519 R--TYPLDRFWHVLGLGYNPSVN-QRDIERAAVIHYNGNMKPWLEINIP---------KYRNYWTKHV 574 (588)
Q Consensus 519 ~--i~~Ld~~WN~~~lgy~~~i~-~~~ie~~~IIHY~G~~KPW~~~~~~---------~y~~lW~kYl 574 (588)
+ +..||.+||++...+..... ....++|+||||+|+.|||...+.. .....||...
T Consensus 170 ~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~ 237 (240)
T cd02537 170 RGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIY 237 (240)
T ss_pred CCCEeECCcceeeehhhhccCchhhcccCCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHH
Confidence 9 99999999998543321111 1224579999999999999876543 3566677654
No 20
>PLN00176 galactinol synthase
Probab=99.90 E-value=6.1e-23 Score=215.68 Aligned_cols=170 Identities=16% Similarity=0.271 Sum_probs=116.1
Q ss_pred hhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeeccccccc--ccccc-----------cccCCcc
Q 007832 392 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFH--RFDRY-----------LNFSNPL 458 (588)
Q Consensus 392 ~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~~~~--r~~~y-----------Ln~s~p~ 458 (588)
.+|.||.++++. +++||||||+|+||.++|++||+++ +..+|||.||..+.. .+..+ +.| |.
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p~ 174 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--PA 174 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--hh
Confidence 467899999977 6999999999999999999999884 335899999865321 11111 111 10
Q ss_pred cccCCCCCCCccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhhhccCeeeccCccccccC-CCCCC
Q 007832 459 ISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGL-GYNPS 537 (588)
Q Consensus 459 i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~F~g~i~~Ld~~WN~~~l-gy~~~ 537 (588)
. .+. +...||||||||||++.|+.+++.+. +..+....+.|||.| |.+|.++|.+||.+||++.. -+...
T Consensus 175 ~-~g~-~~~~yFNSGVlvinps~~~~~~ll~~----l~~~~~~~f~DQD~L---N~~F~~~~~~Lp~~YN~~~~~~~~~~ 245 (333)
T PLN00176 175 E-LGP-PPPLYFNAGMFVFEPSLSTYEDLLET----LKITPPTPFAEQDFL---NMFFRDIYKPIPPVYNLVLAMLWRHP 245 (333)
T ss_pred h-ccC-CCCCeEEeEEEEEEcCHHHHHHHHHH----HHhcCCCCCCCHHHH---HHHHcCcEEECCchhcCchhhhhhCh
Confidence 0 011 23679999999999999998776643 333333334455555 57899999999999999742 11110
Q ss_pred CCcccCCCcEEEEccC-CCCCcccCCcc---------chHHHHHHhhcc
Q 007832 538 VNQRDIERAAVIHYNG-NMKPWLEINIP---------KYRNYWTKHVDY 576 (588)
Q Consensus 538 i~~~~ie~~~IIHY~G-~~KPW~~~~~~---------~y~~lW~kYl~~ 576 (588)
..-..++++||||+| ..|||...+.+ ...+.||..++.
T Consensus 246 -~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 293 (333)
T PLN00176 246 -ENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYND 293 (333)
T ss_pred -hhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcc
Confidence 011245799999997 57999865432 245678887754
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.71 E-value=1e-17 Score=172.68 Aligned_cols=141 Identities=12% Similarity=0.206 Sum_probs=106.4
Q ss_pred CcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeecccccccccccccccCCcccccCCCCCC
Q 007832 388 YLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 467 (588)
Q Consensus 388 yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~ 467 (588)
.++. +|.||.++++ ++++||||||+|+||.++|++||+++.. ..+||+.. .
T Consensus 76 ~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~~--------------------------~ 126 (278)
T cd06914 76 YWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPRA--------------------------Y 126 (278)
T ss_pred cHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcc-cceeeecC--------------------------c
Confidence 4444 5999999999 5899999999999999999999998733 33555431 0
Q ss_pred CccccceeeeechHHHHhhHHHHHHHHHHHcCCccCCCCCCCchhhhhhccC-------eeeccCc-cccccCCCCCC--
Q 007832 468 CGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR-------TYPLDRF-WHVLGLGYNPS-- 537 (588)
Q Consensus 468 ~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n~~~~l~dqg~Ln~~ll~F~g~-------i~~Ld~~-WN~~~lgy~~~-- 537 (588)
.||||||||||++.|+.+++++++.+....+ ...+|||.|| .+|.|. +..||.+ ||++..-+...
T Consensus 127 ~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~--~~~~DQdiLN---~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~ 201 (278)
T cd06914 127 WKFASHLMVIKPSKEAFKELMTEILPAYLNK--KNEYDMDLIN---EEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLH 201 (278)
T ss_pred ceecceeEEEeCCHHHHHHHHHHHHHhcccC--CCCCChHHHH---HHHhCCccccCcceEEcCccccccCChhhcccCH
Confidence 1899999999999999999999998765322 1456777765 689999 9999997 99885322110
Q ss_pred ----CC---------c-ccCCCcEEEEccCC--CCCcccCC
Q 007832 538 ----VN---------Q-RDIERAAVIHYNGN--MKPWLEIN 562 (588)
Q Consensus 538 ----i~---------~-~~ie~~~IIHY~G~--~KPW~~~~ 562 (588)
.+ . +.+.++++|||++. +|||....
T Consensus 202 ~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 202 KSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred HHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 01 1 22357899999986 69998764
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=98.96 E-value=1.2e-09 Score=127.95 Aligned_cols=255 Identities=19% Similarity=0.261 Sum_probs=165.2
Q ss_pred CCCceEEEEEc-Ccc--hhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCCCceEEEeecchhhhhcccc
Q 007832 277 DPRLFHYALFS-DNV--LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSY 353 (588)
Q Consensus 277 D~~~iHIa~~s-Dnv--laasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~~atI~v~nie~f~~L~~~y 353 (588)
|.+.|+|+... ... +-+-+++.|+++|++.| +-|.++-+-++..=....--.....+...++++ ++|-
T Consensus 1178 ~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~---YkWP---- 1248 (1470)
T KOG1879|consen 1178 DKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQ---YKWP---- 1248 (1470)
T ss_pred ccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHhCceEEEEE---ecCc----
Confidence 44589997744 443 56999999999999987 999999776653211110001111233333332 3331
Q ss_pred hhhhhhhccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccC-CCeEEEEecCeeeccCchhhhccCCCC
Q 007832 354 SPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKG 432 (588)
Q Consensus 354 ~p~l~~l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~-ldKVLYLD~DvIV~~DLseLw~iDL~g 432 (588)
.+|+|.. .+-| -+..|-=+|+.-+||- ++||||.|+|-||+.||.||.++|++|
T Consensus 1249 -rWLhqQ~-------------------EKQR-----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~G 1303 (1470)
T KOG1879|consen 1249 -RWLHQQT-------------------EKQR-----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGG 1303 (1470)
T ss_pred -hhhhhhh-------------------hhhh-----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCC
Confidence 1222110 0111 1356767888999995 999999999999999999999999999
Q ss_pred CeeEeeecccccccccccccccCCcccccCCCCCCCccccceeeeechHHHHhhHHHHHHH-HHHHcCCc-cC--CCCCC
Q 007832 433 KVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHT-WQKMNHDR-QL--WKLGT 508 (588)
Q Consensus 433 ~viaAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~~yFNSGVlLIDL~kWRk~nit~k~~~-~~~~n~~~-~l--~dqg~ 508 (588)
.+.|-++.|..+ ...+.|-+|+....++.+ .+..|.-|...|+||+++|+-.-..++.- |.....+- .+ -|| +
T Consensus 1304 aPygYtPfCdsR-~EMDGyRFWK~GYW~~hL-~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQ-D 1380 (1470)
T KOG1879|consen 1304 APYGYTPFCDSR-REMDGYRFWKQGYWKKHL-RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQ-D 1380 (1470)
T ss_pred CccccCcccccc-ccccchhHHhhhHHHHHh-ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccc-c
Confidence 999999999753 234555556555444333 34678899999999999999888888763 44333221 22 234 3
Q ss_pred CchhhhhhccCeeeccCccccccCCCCCCCCcccCCCcEEEEccCCCCCcccC----CccchHHHHHHhhc
Q 007832 509 LPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEI----NIPKYRNYWTKHVD 575 (588)
Q Consensus 509 Ln~~ll~F~g~i~~Ld~~WN~~~lgy~~~i~~~~ie~~~IIHY~G~~KPW~~~----~~~~y~~lW~kYl~ 575 (588)
||. ++...-.|+.||..|-.+...++ .+..+.+++|--+.+ ||... +..+....|..|..
T Consensus 1381 LPN-nm~hqVpIkSLPqeWLWCETWC~----d~skkkAktIDLCnN--P~TKEpKL~~A~Riv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1381 LPN-NMQHQVPIKSLPQEWLWCETWCD----DESKKKAKTIDLCNN--PLTKEPKLDAARRIVSEWTDYDA 1444 (1470)
T ss_pred ccc-cceeecccccCCcchhhhhhhcC----chhhhhchhhhhhcC--ccccchhhHHHhhhcCCCcccch
Confidence 442 33455578999999887754332 233457888888764 88765 22345566777764
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.70 E-value=1.7e-05 Score=82.54 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=54.3
Q ss_pred hhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeecccc---cccccc--------------------
Q 007832 393 NHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE---TFHRFD-------------------- 449 (588)
Q Consensus 393 ~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~---~~~r~~-------------------- 449 (588)
++.++.+-+.. ++|||+|||+|.||.+++++||+.. -+-.+|.+|... .|+|-+
T Consensus 156 mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ 232 (368)
T COG5597 156 MFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAA 232 (368)
T ss_pred HhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhh
Confidence 45556555555 6999999999999999999999865 233444444321 222221
Q ss_pred ---cccccC--Cccc-ccCCCCCCCccccceeeeechHHHH
Q 007832 450 ---RYLNFS--NPLI-SKNFDPRACGWAYGMNIFDLDEWRR 484 (588)
Q Consensus 450 ---~yLn~s--~p~i-~~~f~~~~~yFNSGVlLIDL~kWRk 484 (588)
.|+++. ++-+ ......-+.+||||.||++..+.--
T Consensus 233 ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm 273 (368)
T COG5597 233 LYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHM 273 (368)
T ss_pred hccccccccccCCcccccCCCcHhhhhccCceeecchHHHH
Confidence 233331 1111 1112222568999999999876543
No 24
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.41 E-value=0.081 Score=57.80 Aligned_cols=161 Identities=16% Similarity=0.240 Sum_probs=85.0
Q ss_pred CCCcchhhhHHhhhhccccCCCeEEEEecCeeeccCchhhhccCCCCC--eeEeeecccccccccccccccCCcccccCC
Q 007832 386 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGK--VNGAVETCGETFHRFDRYLNFSNPLISKNF 463 (588)
Q Consensus 386 ~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~--viaAVeDc~~~~~r~~~yLn~s~p~i~~~f 463 (588)
+.+|+...++|=.+- -+|+.+-|.|||+|.||..-- +.+.+..+ ..-.+. .+...+ ..
T Consensus 179 p~~WaKlpaLR~aM~-~~PeaEWiWWLDsDALImNms---felPlery~~~NlVih-------g~~~~l---------~~ 238 (429)
T PLN03182 179 AGFWAKLPLLRKLML-AHPEVEWIWWMDSDALFTDMT---FEIPLEKYEGYNLVIH-------GWDELV---------YD 238 (429)
T ss_pred CcchhHHHHHHHHHH-HCCCceEEEEecCCceeecCC---CCCCHhHcCCcCeeec-------cchhhh---------ee
Confidence 567877777775543 378999999999999998731 22232211 011111 000000 01
Q ss_pred CCCCCccccceeeeechHHHHhhHHHHHHHHHHHc-----------------CCccCCCCCCCchhhhhh------ccCe
Q 007832 464 DPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMN-----------------HDRQLWKLGTLPPGLITF------WKRT 520 (588)
Q Consensus 464 ~~~~~yFNSGVlLIDL~kWRk~nit~k~~~~~~~n-----------------~~~~l~dqg~Ln~~ll~F------~g~i 520 (588)
..+-.+.|+|+++|-.-.|--.-+. .|..+. .++..+..|+|.++...+ ++.-
T Consensus 239 ~kdW~GLNtGsFLIRNcqWSldlLD----aWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~k 314 (429)
T PLN03182 239 QKSWIGLNTGSFLIRNCQWSLDLLD----AWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDK 314 (429)
T ss_pred ccccCccceeeEEEEcCHHHHHHHH----HHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccc
Confidence 1234578999999977666543221 233222 244555556665543221 2233
Q ss_pred eeccCccccccCC------CCCC---C--CcccCCCcEEEEccCCCCCcccCCccchHHHHH
Q 007832 521 YPLDRFWHVLGLG------YNPS---V--NQRDIERAAVIHYNGNMKPWLEINIPKYRNYWT 571 (588)
Q Consensus 521 ~~Ld~~WN~~~lg------y~~~---i--~~~~ie~~~IIHY~G~~KPW~~~~~~~y~~lW~ 571 (588)
.+|...|-+.|.. |+.. . ...+-+-|.|.||+| .||+...+..+...-|.
T Consensus 315 v~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~~y~~~~C~~ 375 (429)
T PLN03182 315 VYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYGDYPVERCLK 375 (429)
T ss_pred eEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCCCcCHHHHHH
Confidence 4466666666421 1100 0 011224589999999 79997655433344443
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=94.72 E-value=0.061 Score=52.88 Aligned_cols=143 Identities=18% Similarity=0.080 Sum_probs=76.4
Q ss_pred cchhhhHHhh-hhccccCCCeEEEEecCeeeccCchhhhccCCCCCeeEeeecccccccccccccccCCcccccCCCCCC
Q 007832 389 LSILNHLRFY-LPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 467 (588)
Q Consensus 389 iS~~~y~Rf~-IPeIlP~ldKVLYLD~DvIV~~DLseLw~iDL~g~viaAVeDc~~~~~r~~~yLn~s~p~i~~~f~~~~ 467 (588)
+..+...|.- +-+++..=--|+|+|+|++..+|..+++ +-.+.-+.+..|+.... ......
T Consensus 48 ~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~--~~~~~Di~~~~d~~~~~----------------~~~~~~ 109 (212)
T PF03407_consen 48 FQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYF--ENPDADILFSSDGWDGT----------------NSDRNG 109 (212)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhh--ccCCCceEEecCCCccc----------------chhhcC
Confidence 3345556644 3456654346999999999999999998 21333344444554210 001122
Q ss_pred CccccceeeeechHHHHhhHHHH-HHHHHHHcCCc-cCCCCCCCchhhhhhc----c-CeeeccCccccccCCCCCC-CC
Q 007832 468 CGWAYGMNIFDLDEWRRQNITDV-YHTWQKMNHDR-QLWKLGTLPPGLITFW----K-RTYPLDRFWHVLGLGYNPS-VN 539 (588)
Q Consensus 468 ~yFNSGVlLIDL~kWRk~nit~k-~~~~~~~n~~~-~l~dqg~Ln~~ll~F~----g-~i~~Ld~~WN~~~lgy~~~-i~ 539 (588)
..+|+|++.+--. .-+.. +..|....... ..+||..++..+..-. + ++..||..--..|.+|-.. ..
T Consensus 110 ~~~n~G~~~~r~t-----~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~ 184 (212)
T PF03407_consen 110 NLVNTGFYYFRPT-----PRTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRD 184 (212)
T ss_pred CccccceEEEecC-----HHHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecch
Confidence 3459999998543 23333 33465533222 3457777665433211 1 4566666444333333211 00
Q ss_pred ccc---CCCcEEEEccCC
Q 007832 540 QRD---IERAAVIHYNGN 554 (588)
Q Consensus 540 ~~~---ie~~~IIHY~G~ 554 (588)
... ...|.+||.++.
T Consensus 185 ~~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 185 WAWVPTKNKPYIVHANCC 202 (212)
T ss_pred hhhhccccccceEEEcCC
Confidence 111 246899999863
No 26
>PLN03181 glycosyltransferase; Provisional
Probab=88.64 E-value=1.6 Score=48.14 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=26.1
Q ss_pred CCCcchhhhHHhhhhccccCCCeEEEEecCeeeccC
Q 007832 386 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKD 421 (588)
Q Consensus 386 ~~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~D 421 (588)
+..|+..-..|=.+- -+|+.+-|.|||+|+||...
T Consensus 180 p~~WaKipalRaAM~-a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAML-AHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHHH-HCCCceEEEEecCCceeecC
Confidence 456666666663332 28999999999999999865
No 27
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=75.27 E-value=8.9 Score=39.85 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=28.3
Q ss_pred HHhhhhccccCCCeEEEEecCeeeccCchhhhccC
Q 007832 395 LRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSID 429 (588)
Q Consensus 395 ~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~iD 429 (588)
..=.++-++-..+.|||||+|.|...|.+.||+..
T Consensus 80 ~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 80 QNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred hhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 33344556767999999999999999999999853
No 28
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=73.09 E-value=13 Score=33.64 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 157 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQT 233 (588)
Q Consensus 157 ~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~-~~~~~kl~~~~~~~e~~~~~~~~q~ 233 (588)
+++.-||+.-+.++|.+|..+...+. .++.+.=.+.+..|.+++...-+. ..++.+-|+++..+|+-++.+-=|+
T Consensus 11 ~~l~~el~~L~d~lEevL~ssg~~a~--~e~~~lR~r~~~~Lk~~r~rl~~~~d~v~~~sk~a~~~tD~yV~e~PWq~ 86 (104)
T COG4575 11 DQLLAELQELLDTLEEVLKSSGSLAG--DEAEELRSKAESALKEARDRLGDTGDAVVQRSKAAADATDDYVRENPWQG 86 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchh--hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCchH
Confidence 78899999999999999998886652 344454457788888888776666 7899999999999999998876665
No 29
>PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function.
Probab=67.47 E-value=15 Score=31.69 Aligned_cols=69 Identities=22% Similarity=0.337 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHhhcccC--CCCCCCchHHHHHHHHHHHHHhhccCC--ccHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 161 RELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQIQ--DDCAAVVKKLRAMLHSTEEQLRVHK 230 (588)
Q Consensus 161 ~el~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~m~~~~~~~~~~~--~d~~~~~~kl~~~~~~~e~~~~~~~ 230 (588)
+++.-.|+-.|+++|-|+ .|.++-..+...++....-+.+|++.. .|- .|...=.+.|+..|-|++.++
T Consensus 6 kQve~aVetAqkmvG~AT~smdp~~Le~A~qAve~Ar~ql~~a~~~at~lD~-~Fl~~~~~~L~~~eHQL~Eak 78 (79)
T PF10819_consen 6 KQVEMAVETAQKMVGQATMSMDPDQLEHATQAVEDAREQLSQAKSHATGLDE-PFLQQSEQLLDDCEHQLDEAK 78 (79)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHhc
Confidence 677888999999999999 566666788888888888888888655 443 677888889999999987765
No 30
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=65.96 E-value=3.9 Score=41.87 Aligned_cols=23 Identities=26% Similarity=0.453 Sum_probs=12.6
Q ss_pred ccCCCeEEEEecCeeeccCchhh
Q 007832 403 FPRLNKVLFLDDDVVVQKDLSGL 425 (588)
Q Consensus 403 lP~ldKVLYLD~DvIV~~DLseL 425 (588)
+|+.+-|+|||+|.+|..-=-+|
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~L 96 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFSL 96 (239)
T ss_dssp -TT-SEEEEE-TTEEE-------
T ss_pred CCCCCEEEEEcCCeEEEeccccc
Confidence 38899999999999998754444
No 31
>PRK10132 hypothetical protein; Provisional
Probab=59.71 E-value=44 Score=30.46 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 157 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLF 235 (588)
Q Consensus 157 ~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~ 235 (588)
+++..||+.=+.++|.+|.++..++ -.++.+.=.+.+..|..+++...|-..+..+.|.....+++-++.+--++.=
T Consensus 15 e~L~~Dl~~L~~~le~ll~~~~~~~--~~~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~~a~~~~~~~V~~~Pw~svg 91 (108)
T PRK10132 15 QDIQNDVNQLADSLESVLKSWGSDA--KGEAEAARRKAQALLKETRARMHGRTRVQQAARDAVGCADTFVRERPWCSVG 91 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 6899999999999999997777554 1234444447777888888766677777788899999999999888777643
No 32
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=58.21 E-value=5 Score=43.90 Aligned_cols=32 Identities=34% Similarity=0.558 Sum_probs=23.0
Q ss_pred hhhHHhhhhccccCCCeEEEEecCeeeccCchhhhc
Q 007832 392 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 427 (588)
Q Consensus 392 ~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DLseLw~ 427 (588)
.+..|+.+ +. +++ =||||+|+||.+++++|=+
T Consensus 228 Sdl~RLA~--Ly-KYG-GvYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 228 SDLSRLAL--LY-KYG-GVYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHH--HH-HhC-CEEeeccEEEecccccccc
Confidence 45667665 22 232 2799999999999999863
No 33
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=56.29 E-value=24 Score=38.36 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=23.9
Q ss_pred ccCCCeEEEEecCeeeccCchhhhccCC
Q 007832 403 FPRLNKVLFLDDDVVVQKDLSGLWSIDL 430 (588)
Q Consensus 403 lP~ldKVLYLD~DvIV~~DLseLw~iDL 430 (588)
|.+.++.+|+|.|+.+..++..++++-.
T Consensus 122 ~~~~~a~i~~~~~i~~~~~~~~~~~v~~ 149 (369)
T KOG1950|consen 122 LIEDGAAIYLVDDIQRFRNDDANFDVPN 149 (369)
T ss_pred eeccCceEEEecchhhccCccccccccc
Confidence 4568999999999999999999887643
No 34
>PLN02829 Probable galacturonosyltransferase
Probab=51.47 E-value=1.2e+02 Score=35.56 Aligned_cols=69 Identities=20% Similarity=0.221 Sum_probs=47.7
Q ss_pred chHHHHHHHHHHHHHHHhhcccCCCCC--CCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHH
Q 007832 156 NANFVRELRLRIKEVQRALGDATKDSD--LPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEE 224 (588)
Q Consensus 156 ~~~~~~el~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~ 224 (588)
...++|.||-+|--..--++=|...+. |..+...+|++.+.+|+.|-.-..=...+..|+++|=+.+.+
T Consensus 181 ~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~d~~lp~~~~~~~~~m~~~i~~ 251 (639)
T PLN02829 181 PDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASKDSDLPKNANEKLKAMEQTLAK 251 (639)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHHHHHHHH
Confidence 356788999988877766666665544 668999999999999999876322224455666665544443
No 35
>TIGR02977 phageshock_pspA phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by PFAM model pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects.
Probab=41.10 E-value=69 Score=32.28 Aligned_cols=107 Identities=12% Similarity=0.122 Sum_probs=74.9
Q ss_pred CCchhHHHhhhhHHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcccC--CCCCCCchHHHHHHHHHHHHHhhcc
Q 007832 128 TPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQ 203 (588)
Q Consensus 128 ~~~d~~~~~~~dq~~~a~~y~--~~a~~~~~~~~~~el~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~m~~~~~~~~~ 203 (588)
.|-|-.++.|+++|.-||.=+ .+|..+.-++=..++..++.+.+.=.-.|- .+.+|-+.+.......+..+...+.
T Consensus 27 ~~l~q~irem~~~l~~ar~~lA~~~a~~k~~e~~~~~~~~~~~~~~~~A~~Al~~G~EdLAr~Al~~k~~~~~~~~~l~~ 106 (219)
T TIGR02977 27 KMIRLIIQEMEDTLVEVRTTSARTIADKKELERRVSRLEAQVADWQEKAELALSKGREDLARAALIEKQKAQELAEALER 106 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477889999999998888743 444433334444556666666653222222 3445778887777777777777777
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 204 IQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 234 (588)
Q Consensus 204 ~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~ 234 (588)
..-.-...+.+|+.-+..++.++...+.+..
T Consensus 107 ~~~~~~~~v~~l~~~l~~L~~ki~~~k~k~~ 137 (219)
T TIGR02977 107 ELAAVEETLAKLQEDIAKLQAKLAEARARQK 137 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777888899999999999999988776655
No 36
>PRK10807 paraquat-inducible protein B; Provisional
Probab=37.79 E-value=97 Score=35.76 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=24.3
Q ss_pred CCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 182 DLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKK 231 (588)
Q Consensus 182 ~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~ 231 (588)
.||.++.+.++.++.+++.+.. -+..-..|++++..+++-+++.+.
T Consensus 473 ~Lp~~L~~TL~~l~~~l~~~~~----~s~~~~~l~~tl~~l~~~~r~lr~ 518 (547)
T PRK10807 473 QLPADMQKTLRELNRSMQGFQP----GSPAYNKMVADMQRLDQVLRELQP 518 (547)
T ss_pred HHHHHHHHHHHHHHHHHhhcCC----CChHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666666666666665432 122334455555555555544443
No 37
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=36.23 E-value=19 Score=31.66 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=26.8
Q ss_pred CCcchhhhHHhhhhccccCCCeEEEEecCeeeccCc-hhh
Q 007832 387 KYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL-SGL 425 (588)
Q Consensus 387 ~yiS~~~y~Rf~IPeIlP~ldKVLYLD~DvIV~~DL-seL 425 (588)
.+.....++|+.+=-..-. ||+|.|+++.+++ +.+
T Consensus 61 ~~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~ 96 (103)
T PF04488_consen 61 NYAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPW 96 (103)
T ss_pred chHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhh
Confidence 3445678899988555543 8999999999999 554
No 38
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=35.16 E-value=1.6e+02 Score=31.88 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=63.7
Q ss_pred EEEE-EcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHHHHHHhhCCCC-CceEEEeecchhhhhcccchhhhhh
Q 007832 282 HYAL-FSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPG-RATVQVQNIEEFTWLNSSYSPVLKQ 359 (588)
Q Consensus 282 HIa~-~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~mk~wf~~n~~~-~atI~v~nie~f~~L~~~y~p~l~~ 359 (588)
.|++ +++...++.-+|.|++.+.+..+..-.+|..|+-..+....-- .+. .++ .++.. ++.
T Consensus 3 PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~---~~~~~i~-~i~~~-~~~------------ 65 (334)
T cd02514 3 PVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAK---SFGDGVT-HIQHP-PIS------------ 65 (334)
T ss_pred CEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHH---hhccccE-EEEcc-ccc------------
Confidence 3444 5555678999999999984222346677888886554322111 111 111 11110 000
Q ss_pred hccccceeEEecccccCCCCCcccCCCCCcchhhhHHhhhhccccC--CCeEEEEecCeeeccCchhhhc
Q 007832 360 LNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR--LNKVLFLDDDVVVQKDLSGLWS 427 (588)
Q Consensus 360 l~s~~~~~y~F~~~~~~~~~~lk~r~~~yiS~~~y~Rf~IPeIlP~--ldKVLYLD~DvIV~~DLseLw~ 427 (588)
+.+ ..... ++ ..|..++.+++.-+-.+|-. .++||+||+|+++--|.=+.++
T Consensus 66 ----------~~~--~~~~~--~~--~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 66 ----------IKN--VNPPH--KF--QGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred ----------ccc--cCccc--cc--chhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 000 00000 11 24566777888888888764 8999999999999999655443
No 39
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=33.82 E-value=85 Score=35.30 Aligned_cols=42 Identities=29% Similarity=0.582 Sum_probs=33.8
Q ss_pred CCcchhhhHHhhhhccccC--CCeEEEEecCeeeccCchhhhcc
Q 007832 387 KYLSILNHLRFYLPEVFPR--LNKVLFLDDDVVVQKDLSGLWSI 428 (588)
Q Consensus 387 ~yiS~~~y~Rf~IPeIlP~--ldKVLYLD~DvIV~~DLseLw~i 428 (588)
.|..++.|++.-|-.+|.. +++||.|.+|+.|--|+=+-|+-
T Consensus 171 ~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 171 GYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 4667889999999999964 89999999999999998776643
No 40
>PRK10404 hypothetical protein; Provisional
Probab=30.49 E-value=2.1e+02 Score=25.71 Aligned_cols=80 Identities=9% Similarity=0.081 Sum_probs=54.8
Q ss_pred cCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHH-HHHHHHHHHHHHHHHHHHHHH
Q 007832 153 MRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAA-VVKKLRAMLHSTEEQLRVHKK 231 (588)
Q Consensus 153 ~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~-~~~kl~~~~~~~e~~~~~~~~ 231 (588)
..+.+++..||+.=+.++|.++..+..++ -..+.+.=...+..|..++...-|... +..+.|+....+++-++.+--
T Consensus 4 ~~~~~~l~~dl~~L~~dle~Ll~~~~~~a--~e~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~k~aa~~td~yV~e~Pw 81 (101)
T PRK10404 4 QFGDTRIDDDLTLLSETLEEVLRSSGDPA--DQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPW 81 (101)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 45678899999999999999998877553 122333333556666666643334333 445679999999999988776
Q ss_pred HHH
Q 007832 232 QTL 234 (588)
Q Consensus 232 q~~ 234 (588)
|+.
T Consensus 82 ~av 84 (101)
T PRK10404 82 QGI 84 (101)
T ss_pred HHH
Confidence 654
No 41
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=29.52 E-value=2.5e+02 Score=30.66 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=67.9
Q ss_pred HhhhhHHHHHHhhccccccCCchHHHHHHH-----------HHHHHHHHhhcccC-CCCCCCchHHHHHHHHHHHHHhhc
Q 007832 135 RQLKDQLIKAKVYLSLPAMRNNANFVRELR-----------LRIKEVQRALGDAT-KDSDLPRIANDRLKAMEQSLAKGK 202 (588)
Q Consensus 135 ~~~~dq~~~a~~y~~~a~~~~~~~~~~el~-----------~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~m~~~~~~~~ 202 (588)
.+|+.||+.++- .++|.+|.-+=+.++- .+++++.+-.+|-. ....|.+++.+.++--..+.+..+
T Consensus 109 qkL~nqL~~~~~--vf~k~k~~~q~LE~li~~~~EEn~~lqlqL~~l~~e~~Ekeeesq~LnrELaE~layqq~L~~eyQ 186 (401)
T PF06785_consen 109 QKLKNQLFHVRE--VFMKTKGDIQHLEGLIRHLREENQCLQLQLDALQQECGEKEEESQTLNRELAEALAYQQELNDEYQ 186 (401)
T ss_pred HHHHHHHHHHHH--HHHHhcchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 468899999998 7777777644333332 22333334444333 222355566666666666667777
Q ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007832 203 QIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTA 241 (588)
Q Consensus 203 ~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~la~ 241 (588)
.-...-.+|.+|=.+-+-++|.+|+-.+-.=.=+-||+.
T Consensus 187 atf~eq~~ml~kRQ~yI~~LEsKVqDLm~EirnLLQle~ 225 (401)
T PF06785_consen 187 ATFVEQHSMLDKRQAYIGKLESKVQDLMYEIRNLLQLES 225 (401)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 777788889999889999999998766655444555554
No 42
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=29.23 E-value=1.7e+02 Score=29.16 Aligned_cols=109 Identities=23% Similarity=0.217 Sum_probs=75.0
Q ss_pred CCchhHHHhhhhHHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcccC--CCCCCCchHHHHHHHHHHHHHhhcc
Q 007832 128 TPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQ 203 (588)
Q Consensus 128 ~~~d~~~~~~~dq~~~a~~y~--~~a~~~~~~~~~~el~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~m~~~~~~~~~ 203 (588)
.+-|-.+|.|.++|.-|+.=+ .+|....-.+=..++...+.+.+.-...|. .+.+|=..+..+....+..+...+.
T Consensus 26 ~~l~q~ird~e~~l~~a~~~~a~~~a~~~~le~~~~~~~~~~~~~~~~A~~Al~~g~edLAr~al~~k~~~e~~~~~l~~ 105 (221)
T PF04012_consen 26 KMLEQAIRDMEEQLRKARQALARVMANQKRLERKLDEAEEEAEKWEKQAELALAAGREDLAREALQRKADLEEQAERLEQ 105 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999998888732 344333223333445555555553333332 3556777888888888888888888
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 204 IQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFL 236 (588)
Q Consensus 204 ~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~ 236 (588)
..-....-+.+|+.-+..++.++...+.+-..+
T Consensus 106 ~~~~~~~~~~~l~~~l~~l~~kl~e~k~k~~~l 138 (221)
T PF04012_consen 106 QLDQAEAQVEKLKEQLEELEAKLEELKSKREEL 138 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999988777655543
No 43
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=26.88 E-value=41 Score=34.31 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=21.2
Q ss_pred hhhhccccCCCeEEEEecCeeeccC
Q 007832 397 FYLPEVFPRLNKVLFLDDDVVVQKD 421 (588)
Q Consensus 397 f~IPeIlP~ldKVLYLD~DvIV~~D 421 (588)
-.+..+||+.+-||+||+||-|...
T Consensus 33 Cvva~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 33 CVVAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHHHhccCCEEEEEcCCceeecC
Confidence 3467889999999999999998764
No 44
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=24.86 E-value=4.2e+02 Score=22.31 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=25.6
Q ss_pred EEcCcchhhhHHHHHHHhhcCCCCcEEEEEEeCcccHHHH
Q 007832 285 LFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAM 324 (588)
Q Consensus 285 ~~sDnvlaasVvI~Sil~Ns~~p~~ivFHIvtd~i~~~~m 324 (588)
.+.+....+..++.|+...... ...+.|++++.+.+..
T Consensus 4 ~~~~~~~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~ 41 (156)
T cd00761 4 PAYNEEPYLERCLESLLAQTYP--NFEVIVVDDGSTDGTL 41 (156)
T ss_pred eecCcHHHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHH
Confidence 3444455677889999888753 4667888887655443
No 45
>PRK15384 type III secretion system protein; Provisional
Probab=24.16 E-value=38 Score=35.30 Aligned_cols=83 Identities=18% Similarity=0.173 Sum_probs=44.1
Q ss_pred cCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhc---cCCccHHHHHHHHHHHHHH--HHHHHH
Q 007832 153 MRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLHS--TEEQLR 227 (588)
Q Consensus 153 ~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~---~~~~d~~~~~~kl~~~~~~--~e~~~~ 227 (588)
.+.+.-|-.=+.+.+-|-||++|- -.|.|+..+-.+...++|+--.-.| +..+|-+--.+||..+-.. .|.+++
T Consensus 69 Tk~~PYL~NiinaA~IE~eR~IGv-~VDGdFs~~Qk~af~kLE~~yeNIkiIYr~dvdfSMYDkKLsdIY~enI~kqe~~ 147 (336)
T PRK15384 69 TEKNPYLNNIIKAATIEKERLIGI-FVDGDFFPGQKDAFSKLEYDYENIKVIYRNDIDFSMYDKKLSEIYMENISKQESM 147 (336)
T ss_pred cCcCchHHHhHhHhhhccccEEEE-EEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhHHhHHHHHHHHHhhcC
Confidence 344444555555566667776663 3566666555555555555443333 3446667777777765432 344444
Q ss_pred HHHHHHHHH
Q 007832 228 VHKKQTLFL 236 (588)
Q Consensus 228 ~~~~q~~~~ 236 (588)
.+.+...+|
T Consensus 148 ~~~~RD~yL 156 (336)
T PRK15384 148 PEEKRDYHL 156 (336)
T ss_pred chhhhHHHH
Confidence 444444433
No 46
>PRK15383 type III secretion system protein; Provisional
Probab=23.86 E-value=40 Score=35.13 Aligned_cols=87 Identities=18% Similarity=0.176 Sum_probs=53.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhc---cCCccHHHHHHHHHHHHHH--HHH
Q 007832 150 LPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLHS--TEE 224 (588)
Q Consensus 150 ~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~---~~~~d~~~~~~kl~~~~~~--~e~ 224 (588)
|--.+.+.-|-.=+.+.+-|-||++|- -.|.|+..+-.+...++|+--.-.| +..+|-+--.+||..+-.. .|.
T Consensus 67 IiNTk~~PYL~NiinaA~IE~eR~IGv-~VDGdFs~~Qk~af~kLE~~yeNIkiIYr~dvdfSMYDkKLsdIY~enI~kq 145 (335)
T PRK15383 67 IINTQKNPYLNNIINAAIIEKERIIGI-FVDGDFSKGQRKALGKLEQNYRNIKVIYNSDLNYSMYDKKLTTIYLENITKL 145 (335)
T ss_pred eeecCcCchHHHhhhHhhhccccEEEE-EEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhhHhHHHHHHHHHh
Confidence 334445555666666777788888773 4677887666666666666544443 4557888888888876542 344
Q ss_pred HHHHHHHHHHHHH
Q 007832 225 QLRVHKKQTLFLT 237 (588)
Q Consensus 225 ~~~~~~~q~~~~~ 237 (588)
+++.+.+...+|-
T Consensus 146 e~~~~~~RD~yLL 158 (335)
T PRK15383 146 EAQSASERDEVLL 158 (335)
T ss_pred hcCChhhhhHHHH
Confidence 4444444444443
No 47
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=23.86 E-value=2.5e+02 Score=24.34 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 158 NFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQTLFL 236 (588)
Q Consensus 158 ~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~-~~~~~kl~~~~~~~e~~~~~~~~q~~~~ 236 (588)
++..||.+-+.+++.++..+...+ ...+.+.-..++..+..+++.--|. ..+..+.+.....+|+.++.+--++.-+
T Consensus 2 ~l~~~l~~l~~d~~~l~~~~~~~~--~~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~e~P~~svgi 79 (94)
T PF05957_consen 2 DLKAELEQLRADLEDLARSAADLA--GEKADEARDRAEEALDDARDRAEDAADQAREQAREAAEQTEDYVRENPWQSVGI 79 (94)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 466777777777777776665332 1122222234444444444333222 3477888999999999998888877543
No 48
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=23.78 E-value=40 Score=35.11 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=54.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhc---cCCccHHHHHHHHHHHHHH--HHH
Q 007832 150 LPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLHS--TEE 224 (588)
Q Consensus 150 ~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~---~~~~d~~~~~~kl~~~~~~--~e~ 224 (588)
|--.+.+.-|-.=+.+.+-|-||++|- -.|.|+..+-.+...++|+--.-.| +..+|-+--.+||..+-.. .|.
T Consensus 61 IiNTk~~PYL~NiinaA~IE~eR~IGv-~VDGdFs~~Qk~af~kLE~~~eNIkiIYr~dvdfSMYDkKLsdIY~enI~~q 139 (326)
T PRK15382 61 ILNTKEHPYLSNIINAAKIENERIIGV-LVDGDFTYEQKKEFLSLENEFQNIKIIYREDVDFSMYDKKLSDIYLENIHEQ 139 (326)
T ss_pred eeecCcCchHHHhhhHhhhccccEEEE-EEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhhHhHHHHHHHHHh
Confidence 334445555666666777788888773 4677887666666666666554444 4457888888888876543 355
Q ss_pred HHHHHHHHHHHHHHH
Q 007832 225 QLRVHKKQTLFLTQL 239 (588)
Q Consensus 225 ~~~~~~~q~~~~~~l 239 (588)
+++.+.+...+|-++
T Consensus 140 e~~~~~~RD~yLL~l 154 (326)
T PRK15382 140 ESYPASERDNYLLGL 154 (326)
T ss_pred hcCChhhhhHHHHHH
Confidence 555555444444433
No 49
>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins.
Probab=23.57 E-value=1.8e+02 Score=24.90 Aligned_cols=61 Identities=11% Similarity=0.298 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHH
Q 007832 159 FVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQ 225 (588)
Q Consensus 159 ~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~ 225 (588)
..+.+++-+++.++.+.... .++.+..+.++.++.++.+..-|......++..+..+.++=
T Consensus 20 ~l~~l~~~l~~~~~ti~~l~------~~~~~i~~e~~~ll~~~n~l~~dv~~k~~~v~~~~~~v~~~ 80 (90)
T PF06103_consen 20 VLKKLKKTLDEVNKTIDTLQ------EQVDPITKEINDLLHNTNELLEDVNEKLEKVDPVFEAVADL 80 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34555666666665555433 34667778888888888887778888888888877777654
No 50
>PHA01346 hypothetical protein
Probab=23.21 E-value=2.3e+02 Score=21.94 Aligned_cols=42 Identities=31% Similarity=0.479 Sum_probs=29.9
Q ss_pred chHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHH-HHHHHHHHh
Q 007832 156 NANFVRELRLRIKEVQRALGDATKDSDLPRIANDRL-KAMEQSLAK 200 (588)
Q Consensus 156 ~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~~m~~~~~~ 200 (588)
|.-+++||+.-|-|+.|+--.|..|.|++. ++| ..++.++.+
T Consensus 5 ntllmqelrllicelkrlrlsavsdpdfsq---ekihaeldsllrk 47 (53)
T PHA01346 5 NTLLMQELRLLICELKRLRLSAVSDPDFSQ---EKIHAELDSLLRK 47 (53)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCccH---HHHHHHHHHHHHH
Confidence 456899999999999998777888876643 333 345555544
No 51
>PRK10698 phage shock protein PspA; Provisional
Probab=22.65 E-value=2.2e+02 Score=28.97 Aligned_cols=107 Identities=14% Similarity=0.175 Sum_probs=71.1
Q ss_pred CCchhHHHhhhhHHHHHHhhc--cccccCCchHHHHHHHHHHHHHHH----hhcccCCCCCCCchHHHHHHHHHHHHHhh
Q 007832 128 TPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQR----ALGDATKDSDLPRIANDRLKAMEQSLAKG 201 (588)
Q Consensus 128 ~~~d~~~~~~~dq~~~a~~y~--~~a~~~~~~~~~~el~~~~~e~~~----~~~~~~~~~~~~~~~~~~~~~m~~~~~~~ 201 (588)
.|-+-+++.|+|++.=+|.=+ .+|..+.-++=..++...+.+.++ +|.. .+.+|-+.++..-+.....+...
T Consensus 27 k~l~q~i~em~~~l~~~r~alA~~~A~~k~~er~~~~~~~~~~~~e~kA~~Al~~--G~EdLAr~AL~~K~~~~~~~~~l 104 (222)
T PRK10698 27 KLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQAEAQQVEWQEKAELALRK--EKEDLARAALIEKQKLTDLIATL 104 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 467788899999988777632 444333333444455555555553 2222 34557777666666677777777
Q ss_pred ccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 202 KQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFL 236 (588)
Q Consensus 202 ~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~ 236 (588)
+...-.....+.+|+.-+..++.++..++.+-..|
T Consensus 105 ~~~~~~~~~~~~~L~~~l~~L~~ki~eak~k~~~L 139 (222)
T PRK10698 105 EHEVTLVDETLARMKKEIGELENKLSETRARQQAL 139 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788889999999999999988776554443
No 52
>PF11464 Rbsn: Rabenosyn Rab binding domain; InterPro: IPR021565 Rabenosyn-5 (Rbsn) is a multivalent effector with interacts with the Rab family.Rsbn contains distinct Rab4 and Rab5 binding sites within residues 264-500 and 627-784 respectively []. Rab proteins are GTPases involved in the regulation of all stages of membrane trafficking []. ; PDB: 1Z0K_B 1YZM_A 1Z0J_B.
Probab=22.12 E-value=1.2e+02 Score=23.26 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=32.0
Q ss_pred hhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhh
Q 007832 137 LKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRAL 174 (588)
Q Consensus 137 ~~dq~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~ 174 (588)
|-.|+..-++|+.-||..+.-.=+.=|..+++|++.-+
T Consensus 1 LleQi~~I~~~I~qAk~~~r~dEV~~L~~NL~EL~~e~ 38 (42)
T PF11464_consen 1 LLEQINIIESYIKQAKAARRFDEVATLEENLRELQDEI 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 34799999999999999999888889999999998643
No 53
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=21.19 E-value=3e+02 Score=28.36 Aligned_cols=89 Identities=11% Similarity=0.260 Sum_probs=57.9
Q ss_pred HHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCCchHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHH
Q 007832 141 LIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLH 220 (588)
Q Consensus 141 ~~~a~~y~~~a~~~~~~~~~~el~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~ 220 (588)
-..++.+-.++...+.+.+..|++..+.++. .|=..-.+-=+.++.=+..||.+|..+++..-.....+.++..-+.
T Consensus 15 k~k~~i~~e~~~~e~ee~~L~e~~kE~~~L~---~Er~~h~eeLrqI~~DIn~lE~iIkqa~~er~~~~~~i~r~~eey~ 91 (230)
T PF10146_consen 15 KLKNEILQEVESLENEEKCLEEYRKEMEELL---QERMAHVEELRQINQDINTLENIIKQAESERNKRQEKIQRLYEEYK 91 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556677778888888888887777664 1111000111345666788999999999877666667777766666
Q ss_pred HHHHHHHHHHHH
Q 007832 221 STEEQLRVHKKQ 232 (588)
Q Consensus 221 ~~e~~~~~~~~q 232 (588)
.+-+++...++.
T Consensus 92 ~Lk~~in~~R~e 103 (230)
T PF10146_consen 92 PLKDEINELRKE 103 (230)
T ss_pred HHHHHHHHHHHH
Confidence 666676665443
No 54
>COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]
Probab=20.80 E-value=8.5e+02 Score=24.98 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=20.7
Q ss_pred chHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHHHHH
Q 007832 185 RIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHK 230 (588)
Q Consensus 185 ~~~~~~~~~m~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~ 230 (588)
+++...+...+..+..-+...-.-.....+||..+..+|.++...+
T Consensus 88 r~al~~~~~le~~~~~~~~~~~~~~~~~~~l~~~~~~Le~Ki~e~~ 133 (225)
T COG1842 88 REALEEKQSLEDLAKALEAELQQAEEQVEKLKKQLAALEQKIAELR 133 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444433333333344445555555555555554433
Done!